Query 028214
Match_columns 212
No_of_seqs 175 out of 2725
Neff 9.4
Searched_HMMs 29240
Date Mon Mar 25 12:57:55 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028214.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028214hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1wy7_A Hypothetical protein PH 99.9 4.6E-24 1.6E-28 163.7 25.8 201 1-207 3-205 (207)
2 1ne2_A Hypothetical protein TA 99.9 2.2E-23 7.7E-28 159.2 22.2 193 2-205 6-198 (200)
3 3p9n_A Possible methyltransfer 99.8 8.9E-18 3E-22 126.9 17.5 152 25-203 22-185 (189)
4 3lpm_A Putative methyltransfer 99.7 1E-16 3.6E-21 127.0 12.3 115 48-162 49-188 (259)
5 2ift_A Putative methylase HI07 99.7 5.9E-16 2E-20 118.2 14.8 96 26-124 34-136 (201)
6 2fhp_A Methylase, putative; al 99.7 6.1E-16 2.1E-20 116.1 14.0 148 26-202 25-185 (187)
7 2fpo_A Methylase YHHF; structu 99.7 1.3E-15 4.5E-20 116.3 15.4 97 26-125 35-134 (202)
8 3evz_A Methyltransferase; NYSG 99.7 2.7E-15 9.4E-20 116.4 16.4 81 47-127 54-137 (230)
9 1ws6_A Methyltransferase; stru 99.7 4.9E-15 1.7E-19 109.4 15.1 97 25-124 20-121 (171)
10 2esr_A Methyltransferase; stru 99.7 1.3E-15 4.3E-20 113.6 11.9 151 26-205 12-172 (177)
11 3tm4_A TRNA (guanine N2-)-meth 99.6 2.6E-15 8.9E-20 125.0 13.8 119 29-152 203-332 (373)
12 1uwv_A 23S rRNA (uracil-5-)-me 99.6 3.2E-14 1.1E-18 120.6 19.3 126 26-157 264-396 (433)
13 3ldg_A Putative uncharacterize 99.6 4.4E-15 1.5E-19 123.8 13.5 95 28-126 178-313 (384)
14 3dmg_A Probable ribosomal RNA 99.6 6.7E-15 2.3E-19 122.8 14.5 105 47-152 232-342 (381)
15 3q87_B N6 adenine specific DNA 99.6 2.7E-14 9.1E-19 106.1 16.2 106 47-162 22-136 (170)
16 2ozv_A Hypothetical protein AT 99.6 9E-15 3.1E-19 116.0 14.0 118 45-162 33-182 (260)
17 3tma_A Methyltransferase; thum 99.6 5.7E-15 1.9E-19 122.1 13.4 111 28-142 187-307 (354)
18 3gdh_A Trimethylguanosine synt 99.6 4.6E-14 1.6E-18 110.2 17.5 95 28-126 61-157 (241)
19 2qm3_A Predicted methyltransfe 99.6 2.2E-14 7.6E-19 119.4 16.1 130 8-143 133-268 (373)
20 2b3t_A Protein methyltransfera 99.6 3.1E-14 1.1E-18 113.7 16.1 93 33-126 95-189 (276)
21 3k6r_A Putative transferase PH 99.6 7.3E-15 2.5E-19 117.2 12.3 91 47-143 124-216 (278)
22 2jjq_A Uncharacterized RNA met 99.6 2.9E-14 1E-18 120.4 15.9 122 26-156 271-393 (425)
23 4dcm_A Ribosomal RNA large sub 99.6 1.3E-14 4.6E-19 120.8 13.6 107 45-151 219-335 (375)
24 3k0b_A Predicted N6-adenine-sp 99.6 3.6E-15 1.2E-19 124.8 9.9 95 28-126 185-320 (393)
25 3ldu_A Putative methylase; str 99.6 3.5E-15 1.2E-19 124.7 9.6 94 29-126 180-314 (385)
26 3bt7_A TRNA (uracil-5-)-methyl 99.6 1.7E-14 5.7E-19 120.0 13.4 124 26-156 192-333 (369)
27 4dzr_A Protein-(glutamine-N5) 99.6 1.9E-15 6.5E-20 115.5 7.1 96 31-126 12-114 (215)
28 3mti_A RRNA methylase; SAM-dep 99.6 2.2E-14 7.5E-19 107.6 12.5 79 47-126 21-102 (185)
29 2b78_A Hypothetical protein SM 99.6 1.3E-13 4.3E-18 115.3 18.2 126 47-172 211-355 (385)
30 3c0k_A UPF0064 protein YCCW; P 99.6 3.3E-14 1.1E-18 119.2 14.7 106 48-153 220-342 (396)
31 2f8l_A Hypothetical protein LM 99.6 1.3E-14 4.3E-19 119.6 11.8 106 21-126 103-214 (344)
32 1nv8_A HEMK protein; class I a 99.6 4E-14 1.4E-18 113.7 14.1 78 48-126 123-205 (284)
33 1o9g_A RRNA methyltransferase; 99.6 1.2E-14 4E-19 114.4 10.0 98 30-127 33-182 (250)
34 2frn_A Hypothetical protein PH 99.6 1.5E-14 5E-19 115.9 10.5 89 48-142 125-215 (278)
35 1dus_A MJ0882; hypothetical pr 99.6 8.3E-14 2.9E-18 104.5 13.8 95 47-143 51-148 (194)
36 2okc_A Type I restriction enzy 99.6 1.9E-14 6.4E-19 122.5 11.2 119 21-143 148-298 (445)
37 3gru_A Dimethyladenosine trans 99.6 1.5E-14 5E-19 116.6 9.7 101 19-125 24-126 (295)
38 3njr_A Precorrin-6Y methylase; 99.6 5.1E-13 1.7E-17 102.1 17.9 91 45-143 52-145 (204)
39 4hc4_A Protein arginine N-meth 99.5 2.7E-14 9.1E-19 118.5 11.1 79 47-126 82-162 (376)
40 4gek_A TRNA (CMO5U34)-methyltr 99.5 9.1E-14 3.1E-18 110.3 13.7 96 47-143 69-169 (261)
41 2igt_A SAM dependent methyltra 99.5 1.8E-13 6.1E-18 112.2 15.8 124 48-172 153-297 (332)
42 1pjz_A Thiopurine S-methyltran 99.5 2.7E-14 9.4E-19 109.1 10.2 98 45-143 19-131 (203)
43 3g89_A Ribosomal RNA small sub 99.5 1.1E-13 3.8E-18 109.1 13.8 130 47-183 79-216 (249)
44 3m70_A Tellurite resistance pr 99.5 1.4E-13 4.7E-18 110.2 14.6 95 48-143 120-214 (286)
45 3fut_A Dimethyladenosine trans 99.5 3.4E-14 1.2E-18 113.1 10.9 113 5-126 9-123 (271)
46 3e05_A Precorrin-6Y C5,15-meth 99.5 1.1E-12 3.9E-17 99.8 18.4 107 28-143 24-133 (204)
47 3a27_A TYW2, uncharacterized p 99.5 1.6E-13 5.4E-18 109.5 14.1 101 47-153 118-222 (272)
48 2h00_A Methyltransferase 10 do 99.5 1.2E-13 4.1E-18 108.8 13.2 80 48-127 65-154 (254)
49 3eey_A Putative rRNA methylase 99.5 7.1E-14 2.4E-18 105.8 11.1 97 47-143 21-130 (197)
50 3kkz_A Uncharacterized protein 99.5 2.1E-13 7.2E-18 108.1 14.0 94 47-143 45-141 (267)
51 2yxd_A Probable cobalt-precorr 99.5 6.1E-13 2.1E-17 98.9 15.4 104 27-141 18-122 (183)
52 2ih2_A Modification methylase 99.5 6.9E-14 2.4E-18 117.9 11.1 96 20-127 15-112 (421)
53 2xvm_A Tellurite resistance pr 99.5 4.1E-13 1.4E-17 101.4 14.2 96 47-143 31-127 (199)
54 2y1w_A Histone-arginine methyl 99.5 5.4E-14 1.8E-18 116.0 10.0 97 46-143 48-146 (348)
55 1yzh_A TRNA (guanine-N(7)-)-me 99.5 4.9E-13 1.7E-17 102.7 14.7 96 48-143 41-147 (214)
56 3ofk_A Nodulation protein S; N 99.5 3.2E-13 1.1E-17 103.6 13.6 97 45-143 48-145 (216)
57 3jwg_A HEN1, methyltransferase 99.5 1.7E-13 6E-18 105.4 11.9 97 47-143 28-132 (219)
58 3grz_A L11 mtase, ribosomal pr 99.5 1.9E-13 6.6E-18 104.1 12.0 91 47-143 59-150 (205)
59 4dmg_A Putative uncharacterize 99.5 4E-13 1.4E-17 112.4 14.9 95 48-143 214-317 (393)
60 3jwh_A HEN1; methyltransferase 99.5 2.3E-13 7.9E-18 104.6 12.3 97 47-143 28-132 (217)
61 2h1r_A Dimethyladenosine trans 99.5 6.1E-14 2.1E-18 113.4 9.2 95 26-126 24-119 (299)
62 1nkv_A Hypothetical protein YJ 99.5 5.4E-13 1.8E-17 104.9 14.2 97 45-143 33-131 (256)
63 3f4k_A Putative methyltransfer 99.5 9.8E-13 3.4E-17 103.4 15.6 94 47-143 45-141 (257)
64 3bus_A REBM, methyltransferase 99.5 1.6E-12 5.5E-17 103.1 16.9 111 31-143 44-157 (273)
65 2nxc_A L11 mtase, ribosomal pr 99.5 2.2E-13 7.6E-18 107.6 11.7 111 26-143 99-209 (254)
66 3tqs_A Ribosomal RNA small sub 99.5 1.1E-13 3.7E-18 109.4 9.7 95 24-125 9-108 (255)
67 3hem_A Cyclopropane-fatty-acyl 99.5 8.5E-13 2.9E-17 106.5 15.2 110 31-143 55-174 (302)
68 2gb4_A Thiopurine S-methyltran 99.5 4.5E-13 1.5E-17 105.7 13.2 96 47-143 67-182 (252)
69 1wxx_A TT1595, hypothetical pr 99.5 4.8E-13 1.6E-17 111.7 14.0 95 48-143 209-316 (382)
70 2pjd_A Ribosomal RNA small sub 99.5 1.5E-13 5.2E-18 113.1 10.7 95 48-143 196-294 (343)
71 3r0q_C Probable protein argini 99.5 7.1E-13 2.4E-17 110.4 14.8 98 45-143 60-160 (376)
72 1jsx_A Glucose-inhibited divis 99.5 1.1E-12 3.6E-17 100.0 14.6 90 48-143 65-156 (207)
73 1ve3_A Hypothetical protein PH 99.5 7.8E-13 2.7E-17 101.9 14.0 95 48-143 38-133 (227)
74 2as0_A Hypothetical protein PH 99.5 1.3E-13 4.6E-18 115.5 10.2 96 48-143 217-326 (396)
75 3dlc_A Putative S-adenosyl-L-m 99.5 6.4E-13 2.2E-17 101.6 13.2 92 50-143 45-139 (219)
76 1zq9_A Probable dimethyladenos 99.5 1.7E-13 5.9E-18 110.0 10.4 95 26-126 10-106 (285)
77 3dtn_A Putative methyltransfer 99.5 6.4E-13 2.2E-17 103.1 13.0 97 46-143 42-139 (234)
78 4hg2_A Methyltransferase type 99.5 1.4E-13 4.7E-18 109.0 9.3 87 48-143 39-126 (257)
79 3lcc_A Putative methyl chlorid 99.5 4.4E-13 1.5E-17 104.2 11.7 95 48-143 66-162 (235)
80 1wzn_A SAM-dependent methyltra 99.5 1.1E-12 3.7E-17 103.0 14.0 108 35-143 28-136 (252)
81 3hm2_A Precorrin-6Y C5,15-meth 99.5 3.2E-12 1.1E-16 94.8 15.9 92 45-143 22-118 (178)
82 2yx1_A Hypothetical protein MJ 99.5 1E-12 3.5E-17 107.9 14.4 85 48-142 195-281 (336)
83 3ntv_A MW1564 protein; rossman 99.5 7.8E-13 2.7E-17 103.0 13.0 112 31-150 57-174 (232)
84 3vc1_A Geranyl diphosphate 2-C 99.5 1.5E-12 5E-17 105.7 15.0 104 37-143 105-212 (312)
85 3lbf_A Protein-L-isoaspartate 99.5 2E-12 7E-17 98.7 15.0 81 45-126 74-156 (210)
86 1kpg_A CFA synthase;, cyclopro 99.5 1.8E-12 6.2E-17 103.7 15.2 108 33-143 49-159 (287)
87 3dxy_A TRNA (guanine-N(7)-)-me 99.5 8.8E-13 3E-17 101.9 12.9 96 48-143 34-141 (218)
88 3lkd_A Type I restriction-modi 99.5 5.8E-13 2E-17 115.5 13.0 107 20-126 193-310 (542)
89 2fyt_A Protein arginine N-meth 99.5 1.5E-12 5.2E-17 107.0 14.9 97 46-143 62-162 (340)
90 1vl5_A Unknown conserved prote 99.5 1.6E-12 5.5E-17 102.5 14.4 96 45-143 34-131 (260)
91 3ajd_A Putative methyltransfer 99.5 5.3E-13 1.8E-17 106.5 11.3 108 45-152 80-214 (274)
92 3b3j_A Histone-arginine methyl 99.5 3.4E-13 1.2E-17 115.5 10.9 98 45-143 155-254 (480)
93 1xdz_A Methyltransferase GIDB; 99.4 1.7E-12 5.8E-17 101.4 13.8 90 48-143 70-165 (240)
94 1xtp_A LMAJ004091AAA; SGPP, st 99.4 9.9E-13 3.4E-17 103.1 12.4 107 36-143 81-188 (254)
95 3ujc_A Phosphoethanolamine N-m 99.4 6.8E-13 2.3E-17 104.6 11.6 106 37-143 44-150 (266)
96 3v97_A Ribosomal RNA large sub 99.4 2.9E-13 9.9E-18 120.9 10.4 96 27-126 173-316 (703)
97 3g5l_A Putative S-adenosylmeth 99.4 2.5E-12 8.6E-17 100.9 14.6 100 40-143 36-136 (253)
98 3g5t_A Trans-aconitate 3-methy 99.4 4E-13 1.4E-17 108.3 9.8 94 47-143 35-140 (299)
99 3bzb_A Uncharacterized protein 99.4 4.8E-12 1.7E-16 101.3 16.0 106 47-152 78-207 (281)
100 3q7e_A Protein arginine N-meth 99.4 2.1E-12 7.2E-17 106.5 14.3 96 47-143 65-164 (349)
101 1g6q_1 HnRNP arginine N-methyl 99.4 4E-12 1.4E-16 104.0 15.7 95 48-143 38-136 (328)
102 3h2b_A SAM-dependent methyltra 99.4 1.7E-12 5.9E-17 98.5 12.7 101 34-143 31-132 (203)
103 2o57_A Putative sarcosine dime 99.4 3.2E-12 1.1E-16 102.7 14.9 97 45-143 79-178 (297)
104 3ftd_A Dimethyladenosine trans 99.4 2E-13 6.8E-18 107.6 7.6 99 20-125 6-107 (249)
105 1qam_A ERMC' methyltransferase 99.4 4.2E-13 1.4E-17 105.4 9.3 93 26-125 12-106 (244)
106 2r6z_A UPF0341 protein in RSP 99.4 1.9E-13 6.3E-18 108.3 7.4 79 48-127 83-175 (258)
107 3mb5_A SAM-dependent methyltra 99.4 3.5E-12 1.2E-16 100.3 14.6 92 45-143 90-185 (255)
108 1l3i_A Precorrin-6Y methyltran 99.4 3.8E-12 1.3E-16 95.2 14.1 107 27-143 16-125 (192)
109 3uwp_A Histone-lysine N-methyl 99.4 1.1E-12 3.8E-17 109.1 12.1 106 35-143 160-279 (438)
110 3hnr_A Probable methyltransfer 99.4 1.3E-12 4.5E-17 100.4 11.7 92 48-143 45-136 (220)
111 3orh_A Guanidinoacetate N-meth 99.4 6.4E-13 2.2E-17 103.8 10.0 105 47-151 59-170 (236)
112 3dh0_A SAM dependent methyltra 99.4 1.6E-12 5.4E-17 99.8 12.0 97 45-143 34-134 (219)
113 3kr9_A SAM-dependent methyltra 99.4 7.1E-13 2.4E-17 102.5 9.9 102 48-153 15-120 (225)
114 3v97_A Ribosomal RNA large sub 99.4 5.5E-13 1.9E-17 119.1 10.6 79 48-126 539-622 (703)
115 2fk8_A Methoxy mycolic acid sy 99.4 4E-12 1.4E-16 103.2 14.8 108 33-143 75-185 (318)
116 3iv6_A Putative Zn-dependent a 99.4 1.6E-12 5.5E-17 102.8 11.9 111 42-153 39-151 (261)
117 3gnl_A Uncharacterized protein 99.4 6.7E-13 2.3E-17 103.7 9.5 107 48-158 21-132 (244)
118 1xxl_A YCGJ protein; structura 99.4 4.6E-12 1.6E-16 98.8 14.3 96 45-143 18-115 (239)
119 3fpf_A Mtnas, putative unchara 99.4 7.5E-12 2.6E-16 100.3 15.6 94 44-143 118-213 (298)
120 2pwy_A TRNA (adenine-N(1)-)-me 99.4 1.5E-11 5.1E-16 96.7 17.2 78 45-122 93-175 (258)
121 2ar0_A M.ecoki, type I restric 99.4 6E-13 2.1E-17 115.6 9.8 119 21-143 146-303 (541)
122 1yb2_A Hypothetical protein TA 99.4 5.8E-12 2E-16 100.4 14.8 92 45-143 107-202 (275)
123 2ex4_A Adrenal gland protein A 99.4 1.1E-12 3.7E-17 102.5 10.2 96 48-143 79-176 (241)
124 4htf_A S-adenosylmethionine-de 99.4 9.1E-12 3.1E-16 99.5 15.9 93 48-143 68-164 (285)
125 1y8c_A S-adenosylmethionine-de 99.4 5.7E-12 1.9E-16 98.1 14.3 96 48-144 37-134 (246)
126 3lec_A NADB-rossmann superfami 99.4 3.7E-12 1.2E-16 98.7 12.9 108 48-160 21-134 (230)
127 1o54_A SAM-dependent O-methylt 99.4 1.4E-11 4.9E-16 98.2 16.8 79 45-123 109-191 (277)
128 2fca_A TRNA (guanine-N(7)-)-me 99.4 4.3E-12 1.5E-16 97.5 13.1 96 48-143 38-144 (213)
129 4df3_A Fibrillarin-like rRNA/T 99.4 3.1E-12 1.1E-16 99.4 12.3 116 23-143 52-173 (233)
130 2pxx_A Uncharacterized protein 99.4 8.5E-13 2.9E-17 100.7 9.0 106 47-153 41-161 (215)
131 3gu3_A Methyltransferase; alph 99.4 3.4E-12 1.2E-16 102.2 12.8 95 47-143 21-117 (284)
132 3dr5_A Putative O-methyltransf 99.4 6.2E-12 2.1E-16 97.3 13.8 119 26-149 34-160 (221)
133 3thr_A Glycine N-methyltransfe 99.4 5.7E-12 1.9E-16 101.0 14.0 112 48-160 57-183 (293)
134 1zx0_A Guanidinoacetate N-meth 99.4 1.7E-12 6E-17 101.1 10.6 97 47-143 59-161 (236)
135 2p8j_A S-adenosylmethionine-de 99.4 4E-12 1.4E-16 96.8 12.4 95 48-143 23-119 (209)
136 1qyr_A KSGA, high level kasuga 99.4 3.5E-13 1.2E-17 106.3 6.6 93 25-125 2-102 (252)
137 3uzu_A Ribosomal RNA small sub 99.4 9E-13 3.1E-17 105.4 9.0 98 21-125 18-126 (279)
138 1dl5_A Protein-L-isoaspartate 99.4 3.6E-12 1.2E-16 103.7 12.7 83 45-127 72-158 (317)
139 3ocj_A Putative exported prote 99.4 9.8E-13 3.3E-17 106.4 9.2 97 47-143 117-218 (305)
140 1fbn_A MJ fibrillarin homologu 99.4 6.9E-12 2.4E-16 97.4 13.6 94 45-143 71-169 (230)
141 1ri5_A MRNA capping enzyme; me 99.4 5E-12 1.7E-16 101.3 13.2 104 47-150 63-172 (298)
142 3ll7_A Putative methyltransfer 99.4 4.5E-13 1.5E-17 112.1 7.1 78 48-126 93-176 (410)
143 2yqz_A Hypothetical protein TT 99.4 1.4E-11 4.7E-16 97.0 15.1 111 30-143 20-132 (263)
144 3htx_A HEN1; HEN1, small RNA m 99.4 2.7E-12 9.4E-17 114.4 12.0 99 47-145 720-828 (950)
145 2p35_A Trans-aconitate 2-methy 99.4 5.1E-12 1.8E-16 99.3 12.3 101 37-143 22-123 (259)
146 3sm3_A SAM-dependent methyltra 99.4 3.9E-12 1.3E-16 98.3 11.3 95 48-143 30-132 (235)
147 1vbf_A 231AA long hypothetical 99.4 9.2E-12 3.1E-16 96.4 13.3 80 45-126 67-147 (231)
148 3mgg_A Methyltransferase; NYSG 99.4 8.9E-12 3E-16 99.0 13.5 95 47-143 36-133 (276)
149 3bkw_A MLL3908 protein, S-aden 99.4 1E-11 3.5E-16 96.6 13.5 95 45-143 40-135 (243)
150 3d2l_A SAM-dependent methyltra 99.4 4.3E-12 1.5E-16 98.7 11.3 94 48-143 33-128 (243)
151 3g07_A 7SK snRNA methylphospha 99.4 1.7E-12 5.8E-17 104.5 9.2 105 48-152 46-220 (292)
152 1ixk_A Methyltransferase; open 99.4 7.5E-12 2.6E-16 101.8 13.0 81 45-125 115-199 (315)
153 3axs_A Probable N(2),N(2)-dime 99.4 2.4E-12 8.1E-17 107.4 10.2 98 48-151 52-159 (392)
154 3g2m_A PCZA361.24; SAM-depende 99.4 2.4E-12 8.1E-17 103.8 9.9 95 48-143 82-181 (299)
155 1yub_A Ermam, rRNA methyltrans 99.4 8.5E-14 2.9E-18 109.4 1.3 99 21-126 5-106 (245)
156 2dul_A N(2),N(2)-dimethylguano 99.4 4.5E-12 1.5E-16 105.5 11.6 97 48-150 47-164 (378)
157 3c3p_A Methyltransferase; NP_9 99.4 7.5E-12 2.6E-16 95.7 12.0 133 2-143 6-151 (210)
158 2p7i_A Hypothetical protein; p 99.4 4.3E-12 1.5E-16 98.8 10.9 91 47-143 41-132 (250)
159 3e23_A Uncharacterized protein 99.4 2.9E-12 9.8E-17 97.9 9.5 90 48-143 43-132 (211)
160 2yvl_A TRMI protein, hypotheti 99.4 5.9E-11 2E-15 92.7 17.1 77 45-122 88-167 (248)
161 3tr6_A O-methyltransferase; ce 99.4 1.2E-11 4.1E-16 95.4 12.9 103 33-143 52-165 (225)
162 3ege_A Putative methyltransfer 99.4 2.4E-12 8.3E-17 101.8 8.9 90 46-143 32-122 (261)
163 3khk_A Type I restriction-modi 99.3 3.4E-12 1.2E-16 110.9 10.4 100 21-125 222-341 (544)
164 2ipx_A RRNA 2'-O-methyltransfe 99.3 1.2E-11 4E-16 96.2 12.4 103 45-152 74-184 (233)
165 2yxe_A Protein-L-isoaspartate 99.3 1.6E-11 5.5E-16 94.0 13.0 82 45-126 74-159 (215)
166 3pfg_A N-methyltransferase; N, 99.3 1.1E-11 3.7E-16 97.9 12.4 92 48-144 50-143 (263)
167 1i9g_A Hypothetical protein RV 99.3 2.4E-11 8.2E-16 96.8 14.4 78 45-122 96-180 (280)
168 3duw_A OMT, O-methyltransferas 99.3 2.3E-11 7.9E-16 93.7 13.9 111 31-149 44-165 (223)
169 3ou2_A SAM-dependent methyltra 99.3 1.1E-11 3.7E-16 94.8 11.9 92 47-143 45-137 (218)
170 1nt2_A Fibrillarin-like PRE-rR 99.3 1.5E-11 5E-16 94.4 12.6 94 45-143 54-152 (210)
171 2kw5_A SLR1183 protein; struct 99.3 9.5E-12 3.2E-16 94.3 11.4 92 48-143 30-122 (202)
172 3l8d_A Methyltransferase; stru 99.3 1.3E-11 4.4E-16 96.1 12.4 91 48-143 53-144 (242)
173 1m6y_A S-adenosyl-methyltransf 99.3 3.4E-12 1.2E-16 103.1 9.1 80 45-124 23-109 (301)
174 3u81_A Catechol O-methyltransf 99.3 1.3E-11 4.5E-16 95.1 12.1 89 33-124 46-145 (221)
175 3ccf_A Cyclopropane-fatty-acyl 99.3 2.1E-12 7.2E-17 103.0 7.7 91 46-143 55-145 (279)
176 3bgv_A MRNA CAP guanine-N7 met 99.3 1.7E-11 6E-16 99.3 12.9 113 48-160 34-163 (313)
177 3m4x_A NOL1/NOP2/SUN family pr 99.3 7.1E-12 2.4E-16 106.4 11.0 81 45-125 102-187 (456)
178 3bkx_A SAM-dependent methyltra 99.3 2.5E-11 8.7E-16 96.3 13.5 93 36-128 31-137 (275)
179 3tfw_A Putative O-methyltransf 99.3 1.9E-11 6.6E-16 96.0 12.7 110 32-149 50-168 (248)
180 2gs9_A Hypothetical protein TT 99.3 4.2E-11 1.4E-15 91.3 14.3 87 48-143 36-123 (211)
181 4fsd_A Arsenic methyltransfera 99.3 1.4E-11 4.7E-16 102.8 12.4 95 47-143 82-194 (383)
182 3m6w_A RRNA methylase; rRNA me 99.3 7.6E-12 2.6E-16 106.4 10.9 81 45-125 98-182 (464)
183 3adn_A Spermidine synthase; am 99.3 1.3E-11 4.4E-16 99.4 11.4 96 48-143 83-189 (294)
184 2oyr_A UPF0341 protein YHIQ; a 99.3 7.2E-12 2.4E-16 98.9 9.7 79 48-127 86-178 (258)
185 1iy9_A Spermidine synthase; ro 99.3 2.6E-11 8.8E-16 96.8 13.0 102 48-149 75-187 (275)
186 1g8a_A Fibrillarin-like PRE-rR 99.3 3.4E-11 1.2E-15 93.0 13.3 93 46-143 71-169 (227)
187 2gpy_A O-methyltransferase; st 99.3 5.8E-11 2E-15 92.2 14.2 106 31-144 40-152 (233)
188 3ufb_A Type I restriction-modi 99.3 4E-12 1.4E-16 110.2 8.2 101 22-126 195-315 (530)
189 3cgg_A SAM-dependent methyltra 99.3 1.8E-11 6.2E-16 91.7 10.8 91 48-143 46-138 (195)
190 3id6_C Fibrillarin-like rRNA/T 99.3 5.1E-11 1.8E-15 92.6 13.6 84 39-123 67-156 (232)
191 1jg1_A PIMT;, protein-L-isoasp 99.3 1.6E-11 5.4E-16 95.6 10.7 93 29-125 76-170 (235)
192 3s1s_A Restriction endonucleas 99.3 9.6E-12 3.3E-16 110.7 10.5 107 19-125 290-411 (878)
193 1mjf_A Spermidine synthase; sp 99.3 2.1E-11 7.3E-16 97.6 11.7 95 48-143 75-184 (281)
194 2b25_A Hypothetical protein; s 99.3 6.8E-11 2.3E-15 96.9 14.6 91 46-143 103-210 (336)
195 3ggd_A SAM-dependent methyltra 99.3 7E-12 2.4E-16 97.9 8.4 94 47-143 55-154 (245)
196 2avd_A Catechol-O-methyltransf 99.3 5E-11 1.7E-15 92.1 13.0 97 48-149 69-177 (229)
197 3r3h_A O-methyltransferase, SA 99.3 9.7E-12 3.3E-16 97.5 9.0 105 32-144 47-162 (242)
198 3fzg_A 16S rRNA methylase; met 99.3 2.9E-12 9.8E-17 96.0 5.6 102 48-151 49-152 (200)
199 2b9e_A NOL1/NOP2/SUN domain fa 99.3 2.8E-11 9.4E-16 98.1 11.7 81 45-125 99-186 (309)
200 3ckk_A TRNA (guanine-N(7)-)-me 99.3 5.7E-11 2E-15 92.7 13.1 97 48-144 46-160 (235)
201 2vdw_A Vaccinia virus capping 99.3 3.7E-11 1.3E-15 97.2 12.4 109 48-156 48-173 (302)
202 1sui_A Caffeoyl-COA O-methyltr 99.3 4.3E-11 1.5E-15 94.1 12.3 105 31-143 65-181 (247)
203 2frx_A Hypothetical protein YE 99.3 3.2E-11 1.1E-15 103.3 12.4 78 48-125 117-199 (479)
204 2vdv_E TRNA (guanine-N(7)-)-me 99.3 9.3E-11 3.2E-15 91.9 14.1 96 48-143 49-164 (246)
205 2pt6_A Spermidine synthase; tr 99.3 6.5E-11 2.2E-15 96.5 13.6 96 48-143 116-221 (321)
206 3c3y_A Pfomt, O-methyltransfer 99.3 8.5E-11 2.9E-15 91.7 12.9 104 32-143 57-172 (237)
207 3bwc_A Spermidine synthase; SA 99.3 1.2E-10 4.2E-15 94.1 14.3 103 47-149 94-208 (304)
208 1sqg_A SUN protein, FMU protei 99.3 4.7E-11 1.6E-15 101.0 12.2 81 45-125 243-327 (429)
209 3frh_A 16S rRNA methylase; met 99.3 1.3E-10 4.4E-15 90.1 13.4 100 47-151 104-206 (253)
210 3e8s_A Putative SAM dependent 99.3 7.5E-11 2.6E-15 90.5 12.2 87 48-143 52-143 (227)
211 2pbf_A Protein-L-isoaspartate 99.2 7E-11 2.4E-15 91.2 11.8 95 29-125 63-174 (227)
212 3dli_A Methyltransferase; PSI- 99.2 1.7E-11 5.7E-16 95.6 8.1 88 48-143 41-131 (240)
213 1u2z_A Histone-lysine N-methyl 99.2 1.4E-10 5E-15 97.7 14.4 107 30-143 228-350 (433)
214 4azs_A Methyltransferase WBDD; 99.2 3.8E-11 1.3E-15 105.0 11.2 78 48-126 66-147 (569)
215 2hnk_A SAM-dependent O-methylt 99.2 1.6E-10 5.6E-15 90.0 13.6 91 48-143 60-172 (239)
216 1xj5_A Spermidine synthase 1; 99.2 1.2E-10 4E-15 95.5 13.1 98 47-144 119-227 (334)
217 3bxo_A N,N-dimethyltransferase 99.2 1.1E-10 3.8E-15 90.4 12.3 99 47-150 39-139 (239)
218 2yxl_A PH0851 protein, 450AA l 99.2 1.5E-10 5.1E-15 98.5 13.8 82 45-126 256-343 (450)
219 1inl_A Spermidine synthase; be 99.2 4.2E-11 1.4E-15 96.6 9.5 96 48-143 90-196 (296)
220 2i7c_A Spermidine synthase; tr 99.2 2.1E-10 7.1E-15 91.9 13.5 98 47-144 77-184 (283)
221 2avn_A Ubiquinone/menaquinone 99.2 2.1E-10 7E-15 90.5 13.2 89 48-143 54-143 (260)
222 2o07_A Spermidine synthase; st 99.2 8.2E-11 2.8E-15 95.2 11.0 97 47-143 94-200 (304)
223 3i9f_A Putative type 11 methyl 99.2 6.4E-11 2.2E-15 87.3 9.4 88 47-143 16-103 (170)
224 2r3s_A Uncharacterized protein 99.2 1.7E-10 5.7E-15 94.2 12.7 96 47-143 164-262 (335)
225 3cbg_A O-methyltransferase; cy 99.2 2.2E-10 7.6E-15 89.0 12.6 105 32-144 59-174 (232)
226 3gjy_A Spermidine synthase; AP 99.2 1.3E-10 4.5E-15 94.1 11.5 95 49-143 90-191 (317)
227 1r18_A Protein-L-isoaspartate( 99.2 7.5E-11 2.6E-15 91.2 9.6 95 29-125 67-175 (227)
228 3p2e_A 16S rRNA methylase; met 99.2 4.5E-11 1.5E-15 92.7 8.1 96 48-143 24-130 (225)
229 3lcv_B Sisomicin-gentamicin re 99.2 2.5E-11 8.6E-16 95.0 6.6 104 48-152 132-237 (281)
230 2i62_A Nicotinamide N-methyltr 99.2 7.1E-11 2.4E-15 93.0 9.3 99 45-143 53-189 (265)
231 2a14_A Indolethylamine N-methy 99.2 3.5E-11 1.2E-15 95.3 7.6 99 45-143 52-188 (263)
232 3m33_A Uncharacterized protein 99.2 2.5E-10 8.7E-15 88.2 12.1 69 48-121 48-119 (226)
233 1i1n_A Protein-L-isoaspartate 99.2 2.5E-10 8.6E-15 88.0 11.6 79 47-125 76-163 (226)
234 1qzz_A RDMB, aclacinomycin-10- 99.2 3E-10 1E-14 94.2 12.7 96 46-143 180-278 (374)
235 1ej0_A FTSJ; methyltransferase 99.2 2E-10 6.9E-15 84.5 10.3 70 47-126 21-101 (180)
236 2b2c_A Spermidine synthase; be 99.2 7.7E-11 2.6E-15 95.7 8.7 96 48-143 108-213 (314)
237 1uir_A Polyamine aminopropyltr 99.2 1E-10 3.4E-15 95.1 9.0 96 48-143 77-186 (314)
238 2qe6_A Uncharacterized protein 99.2 1E-09 3.4E-14 87.5 14.4 95 48-143 77-187 (274)
239 2g72_A Phenylethanolamine N-me 99.2 3E-09 1E-13 85.1 17.2 97 47-143 70-206 (289)
240 3mcz_A O-methyltransferase; ad 99.1 3E-10 1E-14 93.4 11.6 94 49-143 180-278 (352)
241 3dp7_A SAM-dependent methyltra 99.1 7.3E-10 2.5E-14 91.7 13.8 95 48-143 179-278 (363)
242 3gwz_A MMCR; methyltransferase 99.1 1.1E-09 3.6E-14 90.9 14.5 102 40-143 194-298 (369)
243 2qfm_A Spermine synthase; sper 99.1 2.3E-10 7.8E-15 93.9 9.9 103 48-150 188-313 (364)
244 3dou_A Ribosomal RNA large sub 99.1 2E-09 6.7E-14 81.3 14.1 68 47-125 24-103 (191)
245 1x19_A CRTF-related protein; m 99.1 9.9E-10 3.4E-14 90.7 13.4 100 42-143 184-286 (359)
246 1tw3_A COMT, carminomycin 4-O- 99.1 7.3E-10 2.5E-14 91.4 12.5 97 45-143 180-279 (360)
247 3mq2_A 16S rRNA methyltransfer 99.1 2.1E-10 7E-15 88.0 7.9 97 47-143 26-131 (218)
248 3i53_A O-methyltransferase; CO 99.1 7.8E-10 2.7E-14 90.3 11.5 94 48-143 169-265 (332)
249 4gqb_A Protein arginine N-meth 99.1 8.6E-11 2.9E-15 103.0 5.9 75 47-122 356-437 (637)
250 1af7_A Chemotaxis receptor met 99.1 4.1E-10 1.4E-14 89.7 9.2 109 48-181 105-256 (274)
251 3hp7_A Hemolysin, putative; st 99.1 5.3E-10 1.8E-14 89.6 9.2 91 47-143 84-179 (291)
252 1p91_A Ribosomal RNA large sub 99.1 2.7E-09 9.1E-14 84.3 13.2 72 47-122 84-157 (269)
253 2ip2_A Probable phenazine-spec 99.1 6.9E-10 2.4E-14 90.6 10.0 92 50-143 169-263 (334)
254 2cmg_A Spermidine synthase; tr 99.1 8E-10 2.7E-14 87.5 10.0 92 48-149 72-169 (262)
255 3cc8_A Putative methyltransfer 99.1 1.3E-09 4.5E-14 83.6 10.7 88 47-143 31-121 (230)
256 2bm8_A Cephalosporin hydroxyla 99.0 1.3E-09 4.6E-14 84.9 10.1 93 48-149 81-185 (236)
257 1vlm_A SAM-dependent methyltra 99.0 3.9E-09 1.3E-13 81.0 12.3 82 49-143 48-130 (219)
258 2plw_A Ribosomal RNA methyltra 99.0 7.4E-09 2.5E-13 78.1 13.0 70 47-126 21-119 (201)
259 2oo3_A Protein involved in cat 99.0 3.1E-10 1E-14 89.9 5.2 104 48-153 91-200 (283)
260 4e2x_A TCAB9; kijanose, tetron 99.0 8.2E-10 2.8E-14 92.9 7.9 105 33-144 92-200 (416)
261 2wa2_A Non-structural protein 99.0 9.2E-10 3.2E-14 87.8 7.2 72 47-122 81-157 (276)
262 2oxt_A Nucleoside-2'-O-methylt 99.0 1.1E-09 3.7E-14 86.9 6.8 72 47-122 73-149 (265)
263 2aot_A HMT, histamine N-methyl 98.9 7.9E-09 2.7E-13 82.8 10.8 95 47-143 51-163 (292)
264 3opn_A Putative hemolysin; str 98.9 2.2E-09 7.5E-14 83.5 6.5 46 47-92 36-81 (232)
265 2nyu_A Putative ribosomal RNA 98.9 3E-08 1E-12 74.4 11.3 69 47-125 21-109 (196)
266 3giw_A Protein of unknown func 98.8 2.4E-08 8.2E-13 79.2 10.2 109 35-143 64-191 (277)
267 1wg8_A Predicted S-adenosylmet 98.8 1.2E-08 4E-13 80.8 8.2 76 46-125 20-101 (285)
268 3lst_A CALO1 methyltransferase 98.8 1.2E-08 4.1E-13 83.9 8.5 99 40-143 176-277 (348)
269 2zfu_A Nucleomethylin, cerebra 98.8 1.5E-08 5.2E-13 77.2 7.1 76 47-143 66-142 (215)
270 1fp1_D Isoliquiritigenin 2'-O- 98.8 3.8E-08 1.3E-12 81.6 10.0 89 47-143 208-297 (372)
271 4a6d_A Hydroxyindole O-methylt 98.7 1E-07 3.6E-12 78.5 11.9 95 47-143 178-274 (353)
272 3reo_A (ISO)eugenol O-methyltr 98.7 5.7E-08 2E-12 80.5 10.2 89 47-143 202-291 (368)
273 2p41_A Type II methyltransfera 98.7 1.7E-08 5.7E-13 81.6 6.6 73 47-124 81-159 (305)
274 1fp2_A Isoflavone O-methyltran 98.7 2.1E-08 7.3E-13 82.5 7.3 86 48-141 188-274 (352)
275 2k4m_A TR8_protein, UPF0146 pr 98.7 4.6E-08 1.6E-12 69.7 7.9 76 48-143 35-115 (153)
276 3p9c_A Caffeic acid O-methyltr 98.7 1.1E-07 3.6E-12 78.7 10.4 89 47-143 200-289 (364)
277 1i4w_A Mitochondrial replicati 98.6 1.5E-07 5E-12 77.3 9.7 107 17-125 24-154 (353)
278 3sso_A Methyltransferase; macr 98.6 1.5E-07 5.2E-12 78.2 9.2 91 48-149 216-322 (419)
279 2xyq_A Putative 2'-O-methyl tr 98.6 4.6E-07 1.6E-11 72.5 11.4 67 45-124 60-134 (290)
280 3cvo_A Methyltransferase-like 98.6 3.4E-06 1.2E-10 63.8 15.5 100 30-143 17-145 (202)
281 3o4f_A Spermidine synthase; am 98.6 8.3E-07 2.8E-11 70.9 12.6 103 48-150 83-197 (294)
282 1zg3_A Isoflavanone 4'-O-methy 98.6 7.5E-08 2.6E-12 79.4 6.7 87 48-142 193-280 (358)
283 4fzv_A Putative methyltransfer 98.5 1.6E-07 5.6E-12 77.3 6.7 81 45-125 145-235 (359)
284 2c7p_A Modification methylase 98.5 4.6E-07 1.6E-11 73.9 8.3 73 48-126 10-84 (327)
285 3ua3_A Protein arginine N-meth 98.5 3.6E-07 1.2E-11 80.5 8.1 74 48-122 409-504 (745)
286 1g55_A DNA cytosine methyltran 98.5 1.6E-07 5.6E-12 77.0 5.3 73 50-126 3-81 (343)
287 2zig_A TTHA0409, putative modi 98.4 1E-06 3.4E-11 70.9 9.7 60 29-94 221-280 (297)
288 3g7u_A Cytosine-specific methy 98.4 7.6E-07 2.6E-11 73.9 8.3 73 50-126 3-84 (376)
289 1g60_A Adenine-specific methyl 98.4 1.3E-06 4.4E-11 68.9 8.1 60 30-95 199-258 (260)
290 2ld4_A Anamorsin; methyltransf 98.3 8.7E-07 3E-11 65.3 6.0 80 45-143 9-92 (176)
291 4auk_A Ribosomal RNA large sub 98.2 5.5E-06 1.9E-10 68.1 9.5 71 47-124 210-281 (375)
292 3ubt_Y Modification methylase 98.2 2.8E-06 9.6E-11 69.1 7.1 72 50-126 1-74 (331)
293 3tka_A Ribosomal RNA small sub 98.2 5.7E-06 1.9E-10 67.0 8.5 88 36-126 45-141 (347)
294 3c6k_A Spermine synthase; sper 98.2 4.8E-06 1.6E-10 68.6 8.2 76 47-122 204-293 (381)
295 2qrv_A DNA (cytosine-5)-methyl 98.1 9.3E-06 3.2E-10 65.1 8.0 76 47-126 14-96 (295)
296 3evf_A RNA-directed RNA polyme 98.1 1.3E-05 4.4E-10 63.1 8.0 91 33-124 59-151 (277)
297 1boo_A Protein (N-4 cytosine-s 98.1 1.6E-06 5.5E-11 70.5 2.9 77 29-111 238-314 (323)
298 4h0n_A DNMT2; SAH binding, tra 98.0 8.4E-06 2.9E-10 66.5 6.3 73 50-126 4-82 (333)
299 3qv2_A 5-cytosine DNA methyltr 98.0 1.2E-05 4.1E-10 65.4 6.5 73 49-126 10-89 (327)
300 2qy6_A UPF0209 protein YFCK; s 98.0 4.3E-05 1.5E-09 60.0 9.2 105 48-153 60-215 (257)
301 3gcz_A Polyprotein; flavivirus 97.9 2.2E-05 7.6E-10 61.9 6.4 90 33-124 75-167 (282)
302 3p8z_A Mtase, non-structural p 97.8 2E-05 6.8E-10 60.5 4.2 88 33-122 63-153 (267)
303 3me5_A Cytosine-specific methy 97.7 3.8E-05 1.3E-09 65.5 5.7 77 49-126 88-182 (482)
304 1eg2_A Modification methylase 97.7 8.1E-05 2.8E-09 60.3 7.3 62 28-95 227-291 (319)
305 3lkz_A Non-structural protein 97.6 0.00014 4.8E-09 57.6 7.3 87 34-122 80-169 (321)
306 2wk1_A NOVP; transferase, O-me 97.6 0.00052 1.8E-08 54.5 10.8 101 48-152 106-245 (282)
307 2px2_A Genome polyprotein [con 97.2 0.0016 5.5E-08 50.6 8.3 88 33-123 58-149 (269)
308 3swr_A DNA (cytosine-5)-methyl 97.2 0.00085 2.9E-08 61.9 7.9 74 49-126 540-631 (1002)
309 3eld_A Methyltransferase; flav 97.1 0.0018 6E-08 51.5 8.2 76 47-124 80-158 (300)
310 4ft4_B DNA (cytosine-5)-methyl 97.1 0.0012 4.1E-08 59.7 8.0 45 48-92 211-261 (784)
311 3b5i_A S-adenosyl-L-methionine 96.9 0.05 1.7E-06 44.8 15.2 94 34-127 33-164 (374)
312 3av4_A DNA (cytosine-5)-methyl 96.8 0.0032 1.1E-07 59.7 8.4 75 48-126 850-942 (1330)
313 4dkj_A Cytosine-specific methy 96.8 0.0021 7E-08 53.7 6.1 77 50-126 11-138 (403)
314 2efj_A 3,7-dimethylxanthine me 96.7 0.0072 2.5E-07 50.0 8.6 78 49-127 53-163 (384)
315 2py6_A Methyltransferase FKBM; 96.7 0.0075 2.6E-07 50.4 8.7 60 47-106 225-292 (409)
316 4fn4_A Short chain dehydrogena 95.8 0.029 9.9E-07 43.7 7.2 76 46-122 4-93 (254)
317 1m6e_X S-adenosyl-L-methionnin 95.6 0.027 9.4E-07 46.1 6.9 79 49-127 52-153 (359)
318 2zig_A TTHA0409, putative modi 95.4 0.025 8.5E-07 45.0 5.7 30 97-126 21-53 (297)
319 3r24_A NSP16, 2'-O-methyl tran 95.4 0.018 6.1E-07 45.8 4.6 63 48-123 109-179 (344)
320 4g81_D Putative hexonate dehyd 94.6 0.12 4.1E-06 40.2 7.4 79 47-126 7-99 (255)
321 1g60_A Adenine-specific methyl 93.0 0.36 1.2E-05 37.4 7.6 29 98-126 5-36 (260)
322 4hp8_A 2-deoxy-D-gluconate 3-d 92.8 0.67 2.3E-05 35.8 8.7 76 47-125 7-91 (247)
323 3pxx_A Carveol dehydrogenase; 92.8 1.1 3.7E-05 34.7 10.2 78 47-125 8-111 (287)
324 1zkd_A DUF185; NESG, RPR58, st 92.6 1.3 4.5E-05 36.5 10.7 46 48-93 80-133 (387)
325 4fgs_A Probable dehydrogenase 92.3 1.4 4.7E-05 34.5 10.1 75 46-124 26-114 (273)
326 1boo_A Protein (N-4 cytosine-s 92.3 0.15 5.2E-06 41.0 4.7 30 97-126 14-46 (323)
327 3ucx_A Short chain dehydrogena 92.3 1.1 3.7E-05 34.5 9.5 76 47-123 9-98 (264)
328 3llv_A Exopolyphosphatase-rela 92.0 1.4 4.8E-05 30.2 8.9 65 49-122 6-79 (141)
329 3tsc_A Putative oxidoreductase 91.7 2.1 7.1E-05 33.1 10.6 78 47-125 9-113 (277)
330 1rjd_A PPM1P, carboxy methyl t 91.6 3.3 0.00011 33.4 11.8 99 48-147 97-228 (334)
331 4da9_A Short-chain dehydrogena 91.6 1.1 3.8E-05 34.8 8.9 77 46-123 26-117 (280)
332 3h7a_A Short chain dehydrogena 91.6 0.71 2.4E-05 35.3 7.7 78 47-125 5-95 (252)
333 3tjr_A Short chain dehydrogena 91.5 1.1 3.9E-05 35.2 8.9 79 46-125 28-120 (301)
334 3fwz_A Inner membrane protein 91.4 0.87 3E-05 31.4 7.3 67 49-122 7-80 (140)
335 3qiv_A Short-chain dehydrogena 91.2 1.3 4.4E-05 33.6 8.8 76 47-123 7-96 (253)
336 4egf_A L-xylulose reductase; s 91.2 0.85 2.9E-05 35.2 7.8 78 47-125 18-110 (266)
337 3gaf_A 7-alpha-hydroxysteroid 91.0 1.1 3.9E-05 34.2 8.3 78 47-125 10-101 (256)
338 3lf2_A Short chain oxidoreduct 91.0 2.8 9.5E-05 32.1 10.6 78 47-125 6-99 (265)
339 2uyo_A Hypothetical protein ML 90.9 1.7 5.7E-05 34.7 9.4 92 49-142 103-208 (310)
340 3imf_A Short chain dehydrogena 90.7 1 3.5E-05 34.5 7.8 76 47-123 4-93 (257)
341 3s55_A Putative short-chain de 90.6 3.3 0.00011 31.9 10.7 79 46-125 7-111 (281)
342 3t7c_A Carveol dehydrogenase; 90.3 1.9 6.4E-05 33.9 9.1 78 46-124 25-128 (299)
343 3lyl_A 3-oxoacyl-(acyl-carrier 90.3 1.5 5.1E-05 33.1 8.3 77 48-125 4-94 (247)
344 3rkr_A Short chain oxidoreduct 90.1 1.5 5.3E-05 33.5 8.4 75 47-123 27-116 (262)
345 3sju_A Keto reductase; short-c 90.1 1.5 5.2E-05 34.0 8.4 77 48-125 23-113 (279)
346 2dph_A Formaldehyde dismutase; 90.1 0.76 2.6E-05 37.8 6.9 45 45-89 182-228 (398)
347 3ius_A Uncharacterized conserv 90.0 5.3 0.00018 30.6 11.5 67 50-125 6-75 (286)
348 3tfo_A Putative 3-oxoacyl-(acy 89.8 1.5 5.1E-05 33.9 8.1 76 48-124 3-92 (264)
349 3r1i_A Short-chain type dehydr 89.8 1.3 4.3E-05 34.5 7.6 79 46-125 29-121 (276)
350 3v8b_A Putative dehydrogenase, 89.7 1.7 6E-05 33.8 8.5 76 47-123 26-115 (283)
351 3o38_A Short chain dehydrogena 89.6 2.2 7.4E-05 32.6 8.9 78 47-125 20-113 (266)
352 3uve_A Carveol dehydrogenase ( 89.5 2.3 8E-05 32.9 9.1 77 47-124 9-115 (286)
353 3sx2_A Putative 3-ketoacyl-(ac 89.5 2.3 7.8E-05 32.8 8.9 79 47-126 11-115 (278)
354 3pgx_A Carveol dehydrogenase; 89.5 2.4 8.2E-05 32.8 9.1 79 46-125 12-117 (280)
355 3svt_A Short-chain type dehydr 89.4 2.2 7.5E-05 33.0 8.8 76 47-123 9-101 (281)
356 4fs3_A Enoyl-[acyl-carrier-pro 89.4 2.1 7.2E-05 32.8 8.6 78 46-124 3-97 (256)
357 2jah_A Clavulanic acid dehydro 89.2 2.6 9E-05 31.9 9.0 77 47-124 5-95 (247)
358 1yb1_A 17-beta-hydroxysteroid 89.0 2.6 9E-05 32.4 9.0 77 47-125 29-120 (272)
359 3abi_A Putative uncharacterize 89.0 1.3 4.6E-05 35.9 7.5 67 48-123 15-87 (365)
360 3ftp_A 3-oxoacyl-[acyl-carrier 88.9 1.7 5.9E-05 33.6 7.8 77 47-124 26-116 (270)
361 1eg2_A Modification methylase 88.9 0.39 1.3E-05 38.5 4.2 30 97-126 38-71 (319)
362 4imr_A 3-oxoacyl-(acyl-carrier 88.9 1.1 3.9E-05 34.7 6.8 78 47-125 31-121 (275)
363 3ioy_A Short-chain dehydrogena 88.8 2.9 9.9E-05 33.2 9.2 77 47-124 6-98 (319)
364 3ic5_A Putative saccharopine d 88.7 1.4 4.7E-05 28.8 6.3 69 48-124 4-80 (118)
365 3awd_A GOX2181, putative polyo 88.7 2.9 9.9E-05 31.6 9.0 76 47-124 11-101 (260)
366 1zem_A Xylitol dehydrogenase; 88.7 2.9 9.8E-05 32.0 8.9 76 47-123 5-94 (262)
367 2ae2_A Protein (tropinone redu 88.7 2.8 9.7E-05 31.9 8.9 76 47-124 7-98 (260)
368 3gvc_A Oxidoreductase, probabl 88.7 3.6 0.00012 31.9 9.5 75 47-125 27-115 (277)
369 4ibo_A Gluconate dehydrogenase 88.6 1.1 3.8E-05 34.7 6.5 77 47-124 24-114 (271)
370 3ged_A Short-chain dehydrogena 88.5 2.3 8E-05 32.6 8.2 70 50-124 3-86 (247)
371 1ae1_A Tropinone reductase-I; 88.5 3.1 0.0001 32.0 9.0 77 47-124 19-110 (273)
372 2rhc_B Actinorhodin polyketide 88.4 3 0.0001 32.2 8.9 76 47-124 20-110 (277)
373 3vyw_A MNMC2; tRNA wobble urid 88.2 4.3 0.00015 32.3 9.7 105 49-154 97-229 (308)
374 3two_A Mannitol dehydrogenase; 88.2 2.3 7.9E-05 34.1 8.4 67 45-119 173-240 (348)
375 3pk0_A Short-chain dehydrogena 88.1 2.4 8.1E-05 32.5 8.1 77 47-124 8-99 (262)
376 3tox_A Short chain dehydrogena 88.1 1.2 4.2E-05 34.6 6.5 76 47-123 6-95 (280)
377 2qq5_A DHRS1, dehydrogenase/re 88.0 2.5 8.4E-05 32.3 8.1 72 48-121 4-91 (260)
378 3t4x_A Oxidoreductase, short c 87.9 1.6 5.3E-05 33.6 7.0 78 47-125 8-97 (267)
379 1kol_A Formaldehyde dehydrogen 87.8 1.5 5.3E-05 35.8 7.2 45 45-89 182-228 (398)
380 1f8f_A Benzyl alcohol dehydrog 87.7 1.2 4.1E-05 36.1 6.4 46 45-90 187-234 (371)
381 3cxt_A Dehydrogenase with diff 87.6 3.1 0.00011 32.5 8.6 76 47-124 32-122 (291)
382 1iy8_A Levodione reductase; ox 87.6 3.5 0.00012 31.5 8.8 76 47-123 11-102 (267)
383 3sc4_A Short chain dehydrogena 87.5 3 0.0001 32.4 8.4 78 47-125 7-105 (285)
384 3oec_A Carveol dehydrogenase ( 87.4 3.1 0.00011 32.9 8.6 79 46-125 43-147 (317)
385 4gkb_A 3-oxoacyl-[acyl-carrier 87.4 1.2 4E-05 34.5 5.9 75 47-123 5-93 (258)
386 4iin_A 3-ketoacyl-acyl carrier 87.2 3.1 0.0001 32.0 8.3 78 47-125 27-119 (271)
387 3ai3_A NADPH-sorbose reductase 87.0 4 0.00014 31.1 8.8 76 47-124 5-96 (263)
388 3e8x_A Putative NAD-dependent 86.8 3.2 0.00011 30.9 8.1 71 47-125 19-96 (236)
389 3s2e_A Zinc-containing alcohol 86.7 2.5 8.7E-05 33.7 7.8 46 45-90 163-209 (340)
390 1vl8_A Gluconate 5-dehydrogena 86.7 4.4 0.00015 31.1 8.9 77 46-124 18-110 (267)
391 3o26_A Salutaridine reductase; 86.7 3 0.0001 32.4 8.1 76 48-124 11-102 (311)
392 2zat_A Dehydrogenase/reductase 86.5 3.9 0.00013 31.0 8.5 75 47-123 12-101 (260)
393 2dpm_A M.dpnii 1, protein (ade 86.4 1 3.5E-05 35.4 5.1 52 26-84 17-68 (284)
394 3edm_A Short chain dehydrogena 86.4 3.1 0.00011 31.7 7.9 76 47-123 6-96 (259)
395 3rku_A Oxidoreductase YMR226C; 86.3 2.7 9.4E-05 32.8 7.6 77 48-124 32-126 (287)
396 4dmm_A 3-oxoacyl-[acyl-carrier 86.2 3.7 0.00012 31.6 8.2 78 47-125 26-118 (269)
397 1xkq_A Short-chain reductase f 86.1 3.8 0.00013 31.6 8.3 76 47-124 4-97 (280)
398 3ijr_A Oxidoreductase, short c 86.1 4.1 0.00014 31.7 8.6 76 47-123 45-135 (291)
399 3c85_A Putative glutathione-re 85.9 7.6 0.00026 27.7 9.4 66 48-122 38-114 (183)
400 3l77_A Short-chain alcohol deh 85.9 4.8 0.00016 30.0 8.6 75 49-125 2-92 (235)
401 4b79_A PA4098, probable short- 85.7 0.74 2.5E-05 35.4 3.9 71 47-124 9-89 (242)
402 3rih_A Short chain dehydrogena 85.5 2.4 8.1E-05 33.3 6.9 77 47-124 39-130 (293)
403 4dqx_A Probable oxidoreductase 85.4 9.2 0.00031 29.5 10.2 75 47-125 25-113 (277)
404 3kvo_A Hydroxysteroid dehydrog 85.3 4.7 0.00016 32.5 8.7 79 46-125 42-141 (346)
405 3f9i_A 3-oxoacyl-[acyl-carrier 85.3 2.3 8E-05 32.1 6.6 75 46-124 11-95 (249)
406 2uvd_A 3-oxoacyl-(acyl-carrier 85.0 4.8 0.00016 30.3 8.3 75 48-124 3-93 (246)
407 1geg_A Acetoin reductase; SDR 84.9 5.4 0.00019 30.2 8.6 73 49-123 2-89 (256)
408 1fmc_A 7 alpha-hydroxysteroid 84.7 4.5 0.00015 30.4 8.0 76 47-124 9-99 (255)
409 3nyw_A Putative oxidoreductase 84.7 4.9 0.00017 30.5 8.2 77 47-124 5-98 (250)
410 1pl8_A Human sorbitol dehydrog 84.6 2.7 9.3E-05 33.8 7.0 45 45-89 168-214 (356)
411 3nzo_A UDP-N-acetylglucosamine 84.5 3.2 0.00011 34.0 7.5 77 48-125 34-124 (399)
412 3uf0_A Short-chain dehydrogena 84.5 4.5 0.00015 31.2 8.0 78 46-125 28-118 (273)
413 3fpc_A NADP-dependent alcohol 84.5 2.2 7.7E-05 34.2 6.4 48 43-90 161-210 (352)
414 1w6u_A 2,4-dienoyl-COA reducta 84.3 6 0.00021 30.6 8.8 75 48-124 25-115 (302)
415 3oid_A Enoyl-[acyl-carrier-pro 84.3 4.4 0.00015 30.9 7.8 75 48-123 3-92 (258)
416 1e7w_A Pteridine reductase; di 84.1 5.1 0.00017 31.1 8.3 60 48-109 8-73 (291)
417 1xq1_A Putative tropinone redu 84.1 5.3 0.00018 30.3 8.2 74 48-123 13-102 (266)
418 1xhl_A Short-chain dehydrogena 84.1 4.8 0.00017 31.4 8.1 76 47-124 24-117 (297)
419 3rwb_A TPLDH, pyridoxal 4-dehy 84.0 4.4 0.00015 30.7 7.6 75 47-125 4-92 (247)
420 1yxm_A Pecra, peroxisomal tran 83.9 7.2 0.00025 30.2 9.1 75 47-123 16-110 (303)
421 1yf3_A DNA adenine methylase; 83.9 1.8 6E-05 33.6 5.3 29 97-126 149-177 (259)
422 1y1p_A ARII, aldehyde reductas 83.9 10 0.00035 29.6 10.1 75 48-124 10-94 (342)
423 4eso_A Putative oxidoreductase 83.7 7.2 0.00024 29.6 8.8 75 47-125 6-94 (255)
424 3pvc_A TRNA 5-methylaminomethy 83.7 5.7 0.00019 35.1 9.2 96 48-143 58-202 (689)
425 3qlj_A Short chain dehydrogena 83.7 3.3 0.00011 32.8 7.0 78 47-125 25-126 (322)
426 2b4q_A Rhamnolipids biosynthes 83.6 4 0.00014 31.5 7.4 75 47-124 27-116 (276)
427 3oig_A Enoyl-[acyl-carrier-pro 83.5 6.6 0.00023 29.8 8.5 77 47-124 5-98 (266)
428 3is3_A 17BETA-hydroxysteroid d 83.1 6.9 0.00023 29.9 8.5 78 47-125 16-108 (270)
429 1xu9_A Corticosteroid 11-beta- 83.1 5 0.00017 30.9 7.8 71 48-120 27-113 (286)
430 3a28_C L-2.3-butanediol dehydr 82.9 5.5 0.00019 30.2 7.9 74 49-124 2-92 (258)
431 4dry_A 3-oxoacyl-[acyl-carrier 82.8 3.5 0.00012 32.0 6.7 77 47-124 31-122 (281)
432 3f1l_A Uncharacterized oxidore 82.8 5.6 0.00019 30.1 7.8 76 47-123 10-102 (252)
433 2dpm_A M.dpnii 1, protein (ade 82.7 1.9 6.6E-05 33.9 5.2 41 81-125 156-199 (284)
434 3l9w_A Glutathione-regulated p 82.6 2.6 9.1E-05 34.9 6.2 65 49-122 4-77 (413)
435 2z1n_A Dehydrogenase; reductas 82.6 8.3 0.00028 29.2 8.8 75 48-124 6-96 (260)
436 1wma_A Carbonyl reductase [NAD 82.6 5.8 0.0002 30.0 7.9 75 48-124 3-93 (276)
437 3ppi_A 3-hydroxyacyl-COA dehyd 82.5 5.7 0.00019 30.5 7.9 70 47-120 28-110 (281)
438 1mxh_A Pteridine reductase 2; 82.5 5.6 0.00019 30.5 7.8 75 48-124 10-105 (276)
439 1uuf_A YAHK, zinc-type alcohol 82.5 3.6 0.00012 33.3 6.9 45 45-89 191-236 (369)
440 2c07_A 3-oxoacyl-(acyl-carrier 82.4 6.5 0.00022 30.3 8.2 76 48-124 43-132 (285)
441 3m6i_A L-arabinitol 4-dehydrog 82.2 2.9 0.0001 33.6 6.3 46 45-90 176-223 (363)
442 1ja9_A 4HNR, 1,3,6,8-tetrahydr 81.8 7.2 0.00025 29.6 8.2 76 47-124 19-110 (274)
443 3ew7_A LMO0794 protein; Q8Y8U8 81.8 12 0.00043 27.0 9.5 65 51-124 2-72 (221)
444 4f3n_A Uncharacterized ACR, CO 81.8 2.8 9.6E-05 35.1 6.0 68 23-93 108-188 (432)
445 2qhx_A Pteridine reductase 1; 81.8 6.8 0.00023 31.1 8.3 60 48-109 45-110 (328)
446 3r3s_A Oxidoreductase; structu 81.8 5.2 0.00018 31.2 7.5 77 47-124 47-139 (294)
447 2g1p_A DNA adenine methylase; 81.7 1.5 5.1E-05 34.4 4.2 41 81-125 145-186 (278)
448 3rd5_A Mypaa.01249.C; ssgcid, 81.7 6.1 0.00021 30.6 7.8 75 46-124 13-97 (291)
449 4ej6_A Putative zinc-binding d 81.5 5.5 0.00019 32.2 7.7 46 45-90 179-226 (370)
450 2pd6_A Estradiol 17-beta-dehyd 81.5 6.1 0.00021 29.8 7.6 76 47-124 5-103 (264)
451 4fc7_A Peroxisomal 2,4-dienoyl 81.4 6.7 0.00023 30.2 7.9 76 47-123 25-115 (277)
452 3i1j_A Oxidoreductase, short c 81.4 7.3 0.00025 29.1 8.0 77 47-124 12-105 (247)
453 1oaa_A Sepiapterin reductase; 80.9 5.2 0.00018 30.3 7.1 76 47-123 4-102 (259)
454 1gee_A Glucose 1-dehydrogenase 80.9 7.1 0.00024 29.4 7.8 75 48-124 6-96 (261)
455 2bd0_A Sepiapterin reductase; 80.9 7.2 0.00025 29.1 7.8 75 49-124 2-97 (244)
456 3v2h_A D-beta-hydroxybutyrate 80.7 8.4 0.00029 29.7 8.3 79 46-125 22-116 (281)
457 3grk_A Enoyl-(acyl-carrier-pro 80.7 12 0.00041 29.1 9.2 76 47-124 29-120 (293)
458 3v2g_A 3-oxoacyl-[acyl-carrier 80.7 9.9 0.00034 29.2 8.6 78 46-124 28-120 (271)
459 1xg5_A ARPG836; short chain de 80.7 9.5 0.00032 29.2 8.6 75 48-124 31-122 (279)
460 3osu_A 3-oxoacyl-[acyl-carrier 80.7 8.2 0.00028 29.0 8.1 76 48-125 3-94 (246)
461 3jv7_A ADH-A; dehydrogenase, n 80.7 3.4 0.00011 33.0 6.1 45 46-90 169-215 (345)
462 2pnf_A 3-oxoacyl-[acyl-carrier 80.6 8.2 0.00028 28.7 8.0 76 47-124 5-96 (248)
463 3h2s_A Putative NADH-flavin re 80.6 5.3 0.00018 29.2 6.8 67 51-124 2-73 (224)
464 3jyo_A Quinate/shikimate dehyd 80.5 5.5 0.00019 31.2 7.1 77 46-123 124-204 (283)
465 2x9g_A PTR1, pteridine reducta 80.4 6.2 0.00021 30.5 7.4 76 48-124 22-117 (288)
466 3e03_A Short chain dehydrogena 80.3 5.5 0.00019 30.6 7.0 77 47-124 4-101 (274)
467 3goh_A Alcohol dehydrogenase, 80.3 8.6 0.00029 30.1 8.3 68 42-119 136-205 (315)
468 1x1t_A D(-)-3-hydroxybutyrate 80.2 5.4 0.00019 30.3 6.9 75 48-124 3-94 (260)
469 1e3j_A NADP(H)-dependent ketos 80.0 5.1 0.00018 32.0 7.0 44 45-89 165-210 (352)
470 3op4_A 3-oxoacyl-[acyl-carrier 79.8 9.2 0.00032 28.8 8.1 75 47-125 7-95 (248)
471 3tos_A CALS11; methyltransfera 79.8 19 0.00065 27.8 13.7 99 49-151 70-217 (257)
472 1spx_A Short-chain reductase f 79.7 6.6 0.00022 30.1 7.3 74 48-123 5-96 (278)
473 4e6p_A Probable sorbitol dehyd 79.7 12 0.00039 28.4 8.7 74 47-124 6-93 (259)
474 1p0f_A NADP-dependent alcohol 79.7 2.9 0.0001 33.8 5.5 45 45-89 188-234 (373)
475 3h8v_A Ubiquitin-like modifier 79.5 6 0.0002 31.2 7.0 61 46-106 33-115 (292)
476 2cfc_A 2-(R)-hydroxypropyl-COM 79.5 8.6 0.00029 28.7 7.8 73 49-123 2-90 (250)
477 3afn_B Carbonyl reductase; alp 79.3 5.4 0.00018 30.0 6.6 74 48-123 6-95 (258)
478 3ctm_A Carbonyl reductase; alc 79.1 5.4 0.00019 30.5 6.7 77 47-124 32-122 (279)
479 4iiu_A 3-oxoacyl-[acyl-carrier 79.1 7.1 0.00024 29.7 7.3 78 47-125 24-116 (267)
480 3n74_A 3-ketoacyl-(acyl-carrie 79.0 12 0.00043 28.1 8.7 75 47-125 7-95 (261)
481 3zv4_A CIS-2,3-dihydrobiphenyl 78.9 10 0.00034 29.2 8.2 73 47-123 3-89 (281)
482 2hq1_A Glucose/ribitol dehydro 78.9 7.6 0.00026 28.9 7.3 75 48-124 4-94 (247)
483 3l6e_A Oxidoreductase, short-c 78.8 11 0.00039 28.0 8.3 72 49-124 3-88 (235)
484 4dcm_A Ribosomal RNA large sub 78.8 12 0.00041 30.4 8.9 69 48-122 38-109 (375)
485 3ksu_A 3-oxoacyl-acyl carrier 78.6 7.3 0.00025 29.7 7.2 77 47-125 9-103 (262)
486 3guy_A Short-chain dehydrogena 78.2 6.5 0.00022 29.2 6.7 71 51-125 3-84 (230)
487 3l4b_C TRKA K+ channel protien 78.2 2.5 8.4E-05 31.4 4.2 65 51-122 2-74 (218)
488 2fzw_A Alcohol dehydrogenase c 78.2 3.5 0.00012 33.3 5.5 45 45-89 187-233 (373)
489 3ek2_A Enoyl-(acyl-carrier-pro 78.1 8.4 0.00029 29.2 7.5 77 46-124 11-103 (271)
490 3k31_A Enoyl-(acyl-carrier-pro 77.9 11 0.00037 29.3 8.1 76 47-124 28-119 (296)
491 3tzq_B Short-chain type dehydr 77.8 7.2 0.00025 29.9 7.0 74 47-124 9-96 (271)
492 3uko_A Alcohol dehydrogenase c 77.8 3.6 0.00012 33.4 5.5 45 45-89 190-236 (378)
493 2gdz_A NAD+-dependent 15-hydro 77.7 11 0.00037 28.7 7.9 75 48-124 6-97 (267)
494 1hxh_A 3BETA/17BETA-hydroxyste 77.7 9.1 0.00031 28.9 7.5 73 47-124 4-91 (253)
495 3gk3_A Acetoacetyl-COA reducta 77.6 8.7 0.0003 29.3 7.4 75 48-124 24-114 (269)
496 2qrv_B DNA (cytosine-5)-methyl 77.6 1.5 5.1E-05 33.4 2.8 58 48-126 32-94 (230)
497 1hdc_A 3-alpha, 20 beta-hydrox 77.4 10 0.00036 28.6 7.8 74 47-124 3-90 (254)
498 2g1u_A Hypothetical protein TM 77.2 11 0.00038 26.0 7.3 68 47-122 17-93 (155)
499 3uog_A Alcohol dehydrogenase; 77.1 5.3 0.00018 32.2 6.3 46 45-90 186-232 (363)
500 1lss_A TRK system potassium up 77.0 14 0.00046 24.6 11.9 66 49-122 4-78 (140)
No 1
>1wy7_A Hypothetical protein PH1948; seven-stranded beta sheet, methyltransferase fold, structura genomics, transferase; HET: SAH; 2.20A {Pyrococcus horikoshii} SCOP: c.66.1.32
Probab=99.94 E-value=4.6e-24 Score=163.68 Aligned_cols=201 Identities=36% Similarity=0.595 Sum_probs=157.2
Q ss_pred CchHHHHHHhccCCCCCCcccccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCC
Q 028214 1 MKLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDID 80 (212)
Q Consensus 1 ~~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~ 80 (212)
|+++.++.+.+.+..|..+...+.+|++++.+...++..+... ...++.+|||+|||+|.++..+++.+..+|+|+|+|
T Consensus 3 m~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~g~G~G~~~~~l~~~~~~~v~~vD~~ 81 (207)
T 1wy7_A 3 TRKKELAIALSKLKGFKNPKVWLEQYRTPGNAASELLWLAYSL-GDIEGKVVADLGAGTGVLSYGALLLGAKEVICVEVD 81 (207)
T ss_dssp -CCHHHHHHHHTSCCCSSCCGGGTCCCCCHHHHHHHHHHHHHT-TSSTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESC
T ss_pred ccHHHHHHHHhhCcCCCCcccceeeecCchHHHHHHHHHHHHc-CCCCcCEEEEeeCCCCHHHHHHHHcCCCEEEEEECC
Confidence 5678899999999999998889999999988888877665543 445788999999999999999998876689999999
Q ss_pred hHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEe--cCchHHHH
Q 028214 81 SDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH--KTSTREHV 158 (212)
Q Consensus 81 ~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~--~~~~~~~~ 158 (212)
+.+++.+++|++.++.+++++++|+.+++ .+||+|++||||+....+....+++.+.+.. +.+|+++ .+.+.+.+
T Consensus 82 ~~~~~~a~~~~~~~~~~~~~~~~d~~~~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~l-~~~~~~~~~~~~~~~~~ 158 (207)
T 1wy7_A 82 KEAVDVLIENLGEFKGKFKVFIGDVSEFN--SRVDIVIMNPPFGSQRKHADRPFLLKAFEIS-DVVYSIHLAKPEVRRFI 158 (207)
T ss_dssp HHHHHHHHHHTGGGTTSEEEEESCGGGCC--CCCSEEEECCCCSSSSTTTTHHHHHHHHHHC-SEEEEEEECCHHHHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEECchHHcC--CCCCEEEEcCCCccccCCchHHHHHHHHHhc-CcEEEEEeCCcCCHHHH
Confidence 99999999999988778999999999875 3899999999999987777888899888887 5788887 55566655
Q ss_pred HHHHHhhcCCcceeEEEEEeecCCcccccccceeeeEEEEEEEEEeecC
Q 028214 159 KKAALRDFNASSAEVLCELRYDVPQLYKFHKKKEVDIAVDLWRFVPKRN 207 (212)
Q Consensus 159 ~~~~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 207 (212)
.... ...+ .....+....+.+|..+.++......+.+.+++..+..|
T Consensus 159 ~~~l-~~~g-~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 205 (207)
T 1wy7_A 159 EKFS-WEHG-FVVTHRLTTKIEIPLQFFFHRKKLERITVDIYRFSKVIN 205 (207)
T ss_dssp HHHH-HHTT-EEEEEEEEEEEEEC-----CCCCCEEEEEEEEEEEECC-
T ss_pred HHHH-HHCC-CeEEEEEEEecCCcccchhhhceeEEEEEEEEEEEEecc
Confidence 5544 2222 234445556667777778887777888888888876543
No 2
>1ne2_A Hypothetical protein TA1320; structural genomics, conserved hypothetical protein, PSI, protein structure initiative; 1.75A {Thermoplasma acidophilum} SCOP: c.66.1.32
Probab=99.92 E-value=2.2e-23 Score=159.16 Aligned_cols=193 Identities=31% Similarity=0.486 Sum_probs=139.7
Q ss_pred chHHHHHHhccCCCCCCcccccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCCh
Q 028214 2 KLKQLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS 81 (212)
Q Consensus 2 ~~~~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~ 81 (212)
++++|++++..+..+..+...+.+|+++..+...++..+... ...++.+|||+|||+|.++..++..+..+|+|+|+|+
T Consensus 6 ~~~~le~~l~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~vlD~gcG~G~~~~~l~~~~~~~v~~vD~~~ 84 (200)
T 1ne2_A 6 IKNDLEIRLQKLQQQGNFKNYLEQYPTDASTAAYFLIEIYND-GNIGGRSVIDAGTGNGILACGSYLLGAESVTAFDIDP 84 (200)
T ss_dssp HHHHHHHHHHTSCCCC--------CCCCHHHHHHHHHHHHHH-TSSBTSEEEEETCTTCHHHHHHHHTTBSEEEEEESCH
T ss_pred cHHHHHHHHHhcCCCCccccceeecCCCHHHHHHHHHHHHhc-CCCCCCEEEEEeCCccHHHHHHHHcCCCEEEEEECCH
Confidence 467899999999999999999999999999988888666544 4457889999999999999999987666899999999
Q ss_pred HHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHHHHHHH
Q 028214 82 DSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKA 161 (212)
Q Consensus 82 ~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (212)
.+++.|++|+. +++++++|+.+++ .+||+|++||||++...+....+++++.+.. +.+|+++++.+...+...
T Consensus 85 ~~~~~a~~~~~----~~~~~~~d~~~~~--~~~D~v~~~~p~~~~~~~~~~~~l~~~~~~~-g~~~~~~~~~~~~~~~~~ 157 (200)
T 1ne2_A 85 DAIETAKRNCG----GVNFMVADVSEIS--GKYDTWIMNPPFGSVVKHSDRAFIDKAFETS-MWIYSIGNAKARDFLRRE 157 (200)
T ss_dssp HHHHHHHHHCT----TSEEEECCGGGCC--CCEEEEEECCCC-------CHHHHHHHHHHE-EEEEEEEEGGGHHHHHHH
T ss_pred HHHHHHHHhcC----CCEEEECcHHHCC--CCeeEEEECCCchhccCchhHHHHHHHHHhc-CcEEEEEcCchHHHHHHH
Confidence 99999999986 5899999999875 4899999999999987777778899988888 478888888887776665
Q ss_pred HHhhcCCcceeEEEEEeecCCcccccccceeeeEEEEEEEEEee
Q 028214 162 ALRDFNASSAEVLCELRYDVPQLYKFHKKKEVDIAVDLWRFVPK 205 (212)
Q Consensus 162 ~~r~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 205 (212)
. +..+ ....+....+..|....++......+.+.++++.+.
T Consensus 158 ~-~~~g--~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 198 (200)
T 1ne2_A 158 F-SARG--DVFREEKVYITVPRIYRHHSYDRARIEAVIFGVRNH 198 (200)
T ss_dssp H-HHHE--EEEEEEEEEEECCSCCC------CEEEEEEEEEEES
T ss_pred H-HHCC--CEEEEEEEecCCCccccccccceeEEEEEEEEEEec
Confidence 5 3222 234444455666666677777777788888888764
No 3
>3p9n_A Possible methyltransferase (methylase); RV2966C, adoMet binding, RNA methylase, RSMD, SAM-fold, RNA methyltransferase; 1.90A {Mycobacterium tuberculosis}
Probab=99.79 E-value=8.9e-18 Score=126.92 Aligned_cols=152 Identities=18% Similarity=0.237 Sum_probs=109.0
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc
Q 028214 25 QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQC 103 (212)
Q Consensus 25 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~ 103 (212)
..+++..+...++..+... ...++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++|++.++. +++++++
T Consensus 22 ~rp~~~~~~~~l~~~l~~~-~~~~~~~vLDlgcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~ 100 (189)
T 3p9n_A 22 TRPTTDRVRESLFNIVTAR-RDLTGLAVLDLYAGSGALGLEALSRGAASVLFVESDQRSAAVIARNIEALGLSGATLRRG 100 (189)
T ss_dssp C---CHHHHHHHHHHHHHH-SCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEECCHHHHHHHHHHHHHHTCSCEEEEES
T ss_pred CccCcHHHHHHHHHHHHhc-cCCCCCEEEEeCCCcCHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEEc
Confidence 4566667776666655543 3357889999999999999988887777899999999999999999998886 8999999
Q ss_pred ccccCcC---CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHHHHHHHHHh--hcCCcceeEEEEEe
Q 028214 104 DIRNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALR--DFNASSAEVLCELR 178 (212)
Q Consensus 104 d~~~~~~---~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r--~l~~~~~~~~~~~~ 178 (212)
|+.++.. ..+||+|++||||++.. ......++. ..+ .|+ ++|.++.+..
T Consensus 101 d~~~~~~~~~~~~fD~i~~~~p~~~~~-~~~~~~l~~------------------------~~~~~~L~-pgG~l~~~~~ 154 (189)
T 3p9n_A 101 AVAAVVAAGTTSPVDLVLADPPYNVDS-ADVDAILAA------------------------LGTNGWTR-EGTVAVVERA 154 (189)
T ss_dssp CHHHHHHHCCSSCCSEEEECCCTTSCH-HHHHHHHHH------------------------HHHSSSCC-TTCEEEEEEE
T ss_pred cHHHHHhhccCCCccEEEECCCCCcch-hhHHHHHHH------------------------HHhcCccC-CCeEEEEEec
Confidence 9988753 34899999999998531 111122222 223 566 7777777765
Q ss_pred e-----cCCcccc-cccceeeeEEEEEEEEE
Q 028214 179 Y-----DVPQLYK-FHKKKEVDIAVDLWRFV 203 (212)
Q Consensus 179 ~-----~~~~~~~-~~~~~~~~~~~~~~~~~ 203 (212)
. ..|..+. ...+.++.+.+.+++..
T Consensus 155 ~~~~~~~~~~~~~~~~~~~yg~~~~~~~~~~ 185 (189)
T 3p9n_A 155 TTCAPLTWPEGWRRWPQRVYGDTRLELAERL 185 (189)
T ss_dssp TTSCCCCCCTTEEECCCEEETTEEEEEEEEC
T ss_pred CCCCCccCCCceEEEEEcccCcEEEEEeccc
Confidence 3 2234342 34578888888888764
No 4
>3lpm_A Putative methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium, nysgxrc; 2.40A {Listeria monocytogenes}
Probab=99.71 E-value=1e-16 Score=126.99 Aligned_cols=115 Identities=15% Similarity=0.265 Sum_probs=86.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC---CCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW---RGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~---~~~~D~i~~npp 122 (212)
++.+|||+|||+|.+++.++..+..+|+|+|+++.+++.|++|+..++. +++++++|+.++.. ..+||+|++|||
T Consensus 49 ~~~~vLDlG~G~G~~~~~la~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~~v~~~~~D~~~~~~~~~~~~fD~Ii~npP 128 (259)
T 3lpm_A 49 RKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEIIEYDLKKITDLIPKERADIVTCNPP 128 (259)
T ss_dssp SCCEEEETTCTTTHHHHHHHTTCCCEEEEECCSHHHHHHHHHHHHHTTCTTTEEEECSCGGGGGGTSCTTCEEEEEECCC
T ss_pred CCCEEEEcCCchhHHHHHHHHhcCCcEEEEECCHHHHHHHHHHHHHCCCcccEEEEECcHHHhhhhhccCCccEEEECCC
Confidence 6789999999999999999987666999999999999999999998887 59999999998864 348999999999
Q ss_pred CCCC-CCC-----------------chHHHHHHHHhhcC--ceEEEEecCchHHHHHHHH
Q 028214 123 FGTR-KKG-----------------VDMDFLSMALKVAS--QAVYSLHKTSTREHVKKAA 162 (212)
Q Consensus 123 y~~~-~~~-----------------~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 162 (212)
|... ..+ ....+++.+.+.++ +.+++++.+.....+....
T Consensus 129 y~~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l 188 (259)
T 3lpm_A 129 YFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVAASLLKQGGKANFVHRPERLLDIIDIM 188 (259)
T ss_dssp C-----------------------HHHHHHHHHHHHHEEEEEEEEEEECTTTHHHHHHHH
T ss_pred CCCCccccCCCCchHHHhhhccccCCHHHHHHHHHHHccCCcEEEEEEcHHHHHHHHHHH
Confidence 9764 111 11246666666554 3444455555565555554
No 5
>2ift_A Putative methylase HI0767; NESG, Y767_haein, structural genomics, PSI-2, protein structure initiative; 2.30A {Haemophilus influenzae} SCOP: c.66.1.46
Probab=99.69 E-value=5.9e-16 Score=118.19 Aligned_cols=96 Identities=20% Similarity=0.277 Sum_probs=74.9
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEE
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQ 102 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~ 102 (212)
.++...+...++..+... .++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++|++.++. ++++++
T Consensus 34 rp~~~~~~~~l~~~l~~~---~~~~~vLDlGcGtG~~~~~~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~v~~~~ 110 (201)
T 2ift_A 34 RPTGDRVKETLFNWLMPY---IHQSECLDGFAGSGSLGFEALSRQAKKVTFLELDKTVANQLKKNLQTLKCSSEQAEVIN 110 (201)
T ss_dssp ----CHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCTTTEEEEC
T ss_pred CcCHHHHHHHHHHHHHHh---cCCCeEEEcCCccCHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHHhCCCccceEEEE
Confidence 344445555554444332 26789999999999999998877767999999999999999999998875 799999
Q ss_pred cccccCcCC---Cc-ccEEEEcCCCC
Q 028214 103 CDIRNLEWR---GH-VDTVVMNPPFG 124 (212)
Q Consensus 103 ~d~~~~~~~---~~-~D~i~~nppy~ 124 (212)
+|+.++... .+ ||+|++||||+
T Consensus 111 ~d~~~~~~~~~~~~~fD~I~~~~~~~ 136 (201)
T 2ift_A 111 QSSLDFLKQPQNQPHFDVVFLDPPFH 136 (201)
T ss_dssp SCHHHHTTSCCSSCCEEEEEECCCSS
T ss_pred CCHHHHHHhhccCCCCCEEEECCCCC
Confidence 999886542 37 99999999986
No 6
>2fhp_A Methylase, putative; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; HET: MSE; 1.60A {Enterococcus faecalis} SCOP: c.66.1.46
Probab=99.69 E-value=6.1e-16 Score=116.05 Aligned_cols=148 Identities=20% Similarity=0.261 Sum_probs=102.5
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~ 103 (212)
.+++..+...++..+.. ..++.+|||+|||+|.+++.+++.+..+|+|+|+++.+++.|++|+..++. +++++++
T Consensus 25 rp~~~~~~~~~~~~l~~---~~~~~~vLD~GcG~G~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 101 (187)
T 2fhp_A 25 RPTTDKVKESIFNMIGP---YFDGGMALDLYSGSGGLAIEAVSRGMDKSICIEKNFAALKVIKENIAITKEPEKFEVRKM 101 (187)
T ss_dssp CCCCHHHHHHHHHHHCS---CCSSCEEEETTCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES
T ss_pred CcCHHHHHHHHHHHHHh---hcCCCCEEEeCCccCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHhCCCcceEEEEC
Confidence 45666666555544322 246789999999999999998887767999999999999999999988875 6999999
Q ss_pred ccccCcC-----CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHHHHHHHHHhhcCCcceeEEEEEe
Q 028214 104 DIRNLEW-----RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALRDFNASSAEVLCELR 178 (212)
Q Consensus 104 d~~~~~~-----~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~ 178 (212)
|+.+... ..+||+|++||||+.. .....++... ..+.|+ ++|.++....
T Consensus 102 d~~~~~~~~~~~~~~fD~i~~~~~~~~~---~~~~~~~~l~----------------------~~~~L~-~gG~l~~~~~ 155 (187)
T 2fhp_A 102 DANRALEQFYEEKLQFDLVLLDPPYAKQ---EIVSQLEKML----------------------ERQLLT-NEAVIVCETD 155 (187)
T ss_dssp CHHHHHHHHHHTTCCEEEEEECCCGGGC---CHHHHHHHHH----------------------HTTCEE-EEEEEEEEEE
T ss_pred cHHHHHHHHHhcCCCCCEEEECCCCCch---hHHHHHHHHH----------------------HhcccC-CCCEEEEEeC
Confidence 9988543 3489999999998732 2222222210 124555 6676666655
Q ss_pred ec--CCc---cccc-ccceeeeEEEEEEEE
Q 028214 179 YD--VPQ---LYKF-HKKKEVDIAVDLWRF 202 (212)
Q Consensus 179 ~~--~~~---~~~~-~~~~~~~~~~~~~~~ 202 (212)
.. ++. .+.. ..+.++.+.+.+|+.
T Consensus 156 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 185 (187)
T 2fhp_A 156 KTVKLPETIGTLKKTRETVYGITQVTIYRQ 185 (187)
T ss_dssp TTCCCCSEETTEEEEEEEEETTEEEEEEEC
T ss_pred CcccccccccchhhhhhhccCceEEEEEEe
Confidence 32 232 2222 336678888777764
No 7
>2fpo_A Methylase YHHF; structural genomics, putative methyltransferase, PSI, protei structure initiative; HET: MSE; 2.05A {Escherichia coli} SCOP: c.66.1.46
Probab=99.68 E-value=1.3e-15 Score=116.34 Aligned_cols=97 Identities=20% Similarity=0.245 Sum_probs=76.0
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d 104 (212)
.++...+...++..+... .++.+|||+|||+|.+++.++..+..+|+++|+|+.+++.|++|++.++. +++++++|
T Consensus 35 rp~~~~~~~~l~~~l~~~---~~~~~vLDlgcG~G~~~~~l~~~~~~~V~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~D 111 (202)
T 2fpo_A 35 RPTTDRVRETLFNWLAPV---IVDAQCLDCFAGSGALGLEALSRYAAGATLIEMDRAVSQQLIKNLATLKAGNARVVNSN 111 (202)
T ss_dssp ---CHHHHHHHHHHHHHH---HTTCEEEETTCTTCHHHHHHHHTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSC
T ss_pred CCCHHHHHHHHHHHHHhh---cCCCeEEEeCCCcCHHHHHHHhcCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEECC
Confidence 455555555555444332 25789999999999999998877767999999999999999999998887 89999999
Q ss_pred cccCc-CC-CcccEEEEcCCCCC
Q 028214 105 IRNLE-WR-GHVDTVVMNPPFGT 125 (212)
Q Consensus 105 ~~~~~-~~-~~~D~i~~nppy~~ 125 (212)
+.+.. .. .+||+|++||||+.
T Consensus 112 ~~~~~~~~~~~fD~V~~~~p~~~ 134 (202)
T 2fpo_A 112 AMSFLAQKGTPHNIVFVDPPFRR 134 (202)
T ss_dssp HHHHHSSCCCCEEEEEECCSSST
T ss_pred HHHHHhhcCCCCCEEEECCCCCC
Confidence 98743 22 38999999999873
No 8
>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}
Probab=99.67 E-value=2.7e-15 Score=116.37 Aligned_cols=81 Identities=19% Similarity=0.311 Sum_probs=67.9
Q ss_pred CCCCEEEEEcCC-cChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc--CCCcccEEEEcCCC
Q 028214 47 VSNKVVADFGCG-CGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE--WRGHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G-~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--~~~~~D~i~~nppy 123 (212)
.++.+|||+||| +|.+++.+++....+|+|+|+|+.+++.|++|+..++.+++++++|+..+. ...+||+|++||||
T Consensus 54 ~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~I~~npp~ 133 (230)
T 3evz_A 54 RGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNGGIIKGVVEGTFDVIFSAPPY 133 (230)
T ss_dssp CSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSSCSSTTTCCSCEEEEEECCCC
T ss_pred CCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCchhhhhcccCceeEEEECCCC
Confidence 478899999999 999999999874459999999999999999999998888999999964332 22489999999999
Q ss_pred CCCC
Q 028214 124 GTRK 127 (212)
Q Consensus 124 ~~~~ 127 (212)
++..
T Consensus 134 ~~~~ 137 (230)
T 3evz_A 134 YDKP 137 (230)
T ss_dssp C---
T ss_pred cCCc
Confidence 8753
No 9
>1ws6_A Methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Thermus thermophilus} SCOP: c.66.1.46
Probab=99.65 E-value=4.9e-15 Score=109.40 Aligned_cols=97 Identities=16% Similarity=0.239 Sum_probs=77.6
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcc
Q 028214 25 QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCD 104 (212)
Q Consensus 25 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d 104 (212)
..++...+...++......+ .++.+|||+|||+|.++..+++.+. .|+|+|+|+.+++.|++|+..++.+++++++|
T Consensus 20 ~~~~~~~~~~~~~~~~~~~~--~~~~~vLD~GcG~G~~~~~l~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d 96 (171)
T 1ws6_A 20 ARPSPVRLRKALFDYLRLRY--PRRGRFLDPFAGSGAVGLEAASEGW-EAVLVEKDPEAVRLLKENVRRTGLGARVVALP 96 (171)
T ss_dssp CCCCCHHHHHHHHHHHHHHC--TTCCEEEEETCSSCHHHHHHHHTTC-EEEEECCCHHHHHHHHHHHHHHTCCCEEECSC
T ss_pred CCCCHHHHHHHHHHHHHhhc--cCCCeEEEeCCCcCHHHHHHHHCCC-eEEEEeCCHHHHHHHHHHHHHcCCceEEEecc
Confidence 35666666666655544321 1678999999999999999998866 59999999999999999999887789999999
Q ss_pred cccCcC-----CCcccEEEEcCCCC
Q 028214 105 IRNLEW-----RGHVDTVVMNPPFG 124 (212)
Q Consensus 105 ~~~~~~-----~~~~D~i~~nppy~ 124 (212)
+.+... ..+||+|++||||+
T Consensus 97 ~~~~~~~~~~~~~~~D~i~~~~~~~ 121 (171)
T 1ws6_A 97 VEVFLPEAKAQGERFTVAFMAPPYA 121 (171)
T ss_dssp HHHHHHHHHHTTCCEEEEEECCCTT
T ss_pred HHHHHHhhhccCCceEEEEECCCCc
Confidence 987432 12799999999997
No 10
>2esr_A Methyltransferase; structural genomics, hypothetical protein, streptococcus PYO PSI, protein structure initiative; HET: GLC; 1.80A {Streptococcus pyogenes} SCOP: c.66.1.46
Probab=99.65 E-value=1.3e-15 Score=113.65 Aligned_cols=151 Identities=14% Similarity=0.198 Sum_probs=99.8
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~ 103 (212)
.++...+...++..+.. ..++.+|||+|||+|.+++.+++.+..+|+|+|+|+.+++.|+++++.++. +++++++
T Consensus 12 rp~~~~~~~~~~~~l~~---~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~ 88 (177)
T 2esr_A 12 RPTSDKVRGAIFNMIGP---YFNGGRVLDLFAGSGGLAIEAVSRGMSAAVLVEKNRKAQAIIQDNIIMTKAENRFTLLKM 88 (177)
T ss_dssp ------CHHHHHHHHCS---CCCSCEEEEETCTTCHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHHTTTCGGGEEEECS
T ss_pred CcCHHHHHHHHHHHHHh---hcCCCeEEEeCCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEEC
Confidence 34444455444443321 346789999999999999999987767999999999999999999998876 6999999
Q ss_pred ccccCcC--CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHHHHHHHHHhhcCCcceeEEEEEeec-
Q 028214 104 DIRNLEW--RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALRDFNASSAEVLCELRYD- 180 (212)
Q Consensus 104 d~~~~~~--~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r~l~~~~~~~~~~~~~~- 180 (212)
|+.+... ..+||+|++||||+.. .....++... . .+.|+ ++|.++......
T Consensus 89 d~~~~~~~~~~~fD~i~~~~~~~~~---~~~~~~~~l~--------------------~--~~~L~-~gG~l~~~~~~~~ 142 (177)
T 2esr_A 89 EAERAIDCLTGRFDLVFLDPPYAKE---TIVATIEALA--------------------A--KNLLS-EQVMVVCETDKTV 142 (177)
T ss_dssp CHHHHHHHBCSCEEEEEECCSSHHH---HHHHHHHHHH--------------------H--TTCEE-EEEEEEEEEETTC
T ss_pred cHHHhHHhhcCCCCEEEECCCCCcc---hHHHHHHHHH--------------------h--CCCcC-CCcEEEEEECCcc
Confidence 9988422 2379999999998521 1111121111 1 15555 677777666542
Q ss_pred -CCc---cccc-ccceeeeEEEEEEEEEee
Q 028214 181 -VPQ---LYKF-HKKKEVDIAVDLWRFVPK 205 (212)
Q Consensus 181 -~~~---~~~~-~~~~~~~~~~~~~~~~~~ 205 (212)
++. .+.. ..+.++...+.++.+..+
T Consensus 143 ~~~~~~~~~~~~~~~~yg~~~~~~~~~~~~ 172 (177)
T 2esr_A 143 LLPKEIATLGIWKEKIYGISKVTVYVNEGH 172 (177)
T ss_dssp CCCSEETTEEEEEEEEETTEEEEEEEETTC
T ss_pred ccccccCceEEEEeeecCcEEEEEEEeccc
Confidence 222 2222 346778888888876543
No 11
>3tm4_A TRNA (guanine N2-)-methyltransferase TRM14; rossmann fold, thump domain, tRNA methyltransferase; HET: SAM; 1.95A {Pyrococcus furiosus} PDB: 3tlj_A* 3tm5_A*
Probab=99.64 E-value=2.6e-15 Score=125.04 Aligned_cols=119 Identities=27% Similarity=0.324 Sum_probs=88.8
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccc
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDI 105 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~ 105 (212)
.+.++..++... . .++.+|||+|||+|.++++++..+. .+|+|+|+|+.+++.|++|+..++. ++++.++|+
T Consensus 203 ~~~la~~l~~~~-~----~~~~~vLD~gCGsG~~~i~~a~~~~~~~v~g~Dis~~~l~~A~~n~~~~gl~~~i~~~~~D~ 277 (373)
T 3tm4_A 203 KASIANAMIELA-E----LDGGSVLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDA 277 (373)
T ss_dssp CHHHHHHHHHHH-T----CCSCCEEETTCTTCHHHHHHHHTTCCSCEEEEESCHHHHHHHHHHHHHTTCGGGCEEEECCG
T ss_pred cHHHHHHHHHhh-c----CCCCEEEEccCcCcHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECCh
Confidence 456666666555 3 3778999999999999999998754 3899999999999999999999887 799999999
Q ss_pred ccCcCCC-cccEEEEcCCCCCCCC--Cc----hHHHHHHHHhhcC-ceEEEEecC
Q 028214 106 RNLEWRG-HVDTVVMNPPFGTRKK--GV----DMDFLSMALKVAS-QAVYSLHKT 152 (212)
Q Consensus 106 ~~~~~~~-~~D~i~~nppy~~~~~--~~----~~~~l~~~~~~~~-~~~~~~~~~ 152 (212)
.+++... +||+|++||||+.... .. ...+++.+.+..+ ..++++.++
T Consensus 278 ~~~~~~~~~fD~Ii~npPyg~r~~~~~~~~~ly~~~~~~l~r~l~g~~~~i~~~~ 332 (373)
T 3tm4_A 278 TQLSQYVDSVDFAISNLPYGLKIGKKSMIPDLYMKFFNELAKVLEKRGVFITTEK 332 (373)
T ss_dssp GGGGGTCSCEEEEEEECCCC------CCHHHHHHHHHHHHHHHEEEEEEEEESCH
T ss_pred hhCCcccCCcCEEEECCCCCcccCcchhHHHHHHHHHHHHHHHcCCeEEEEECCH
Confidence 9988654 8999999999987521 11 1344555555443 344444433
No 12
>1uwv_A 23S rRNA (uracil-5-)-methyltransferase RUMA; RNA modification, iron-sulfur cluster, RNA processing; 1.95A {Escherichia coli} SCOP: b.40.4.12 c.66.1.40 PDB: 2bh2_A*
Probab=99.63 E-value=3.2e-14 Score=120.62 Aligned_cols=126 Identities=17% Similarity=0.216 Sum_probs=97.5
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d 104 (212)
++.++.....++..+...+...++.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++|++.++. +++++++|
T Consensus 264 ~q~n~~~~e~l~~~~~~~l~~~~~~~VLDlgcG~G~~~~~la~~-~~~V~gvD~s~~al~~A~~n~~~~~~~~v~f~~~d 342 (433)
T 1uwv_A 264 IQVNAGVNQKMVARALEWLDVQPEDRVLDLFCGMGNFTLPLATQ-AASVVGVEGVPALVEKGQQNARLNGLQNVTFYHEN 342 (433)
T ss_dssp CCSBHHHHHHHHHHHHHHHTCCTTCEEEEESCTTTTTHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECC
T ss_pred cccCHHHHHHHHHHHHHhhcCCCCCEEEECCCCCCHHHHHHHhh-CCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 34455566666666666555557789999999999999999987 56999999999999999999998887 89999999
Q ss_pred cccCcC----C-CcccEEEEcCCCCCCCCCchHHHHHHHHhhc-CceEEEEecCchHHH
Q 028214 105 IRNLEW----R-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVA-SQAVYSLHKTSTREH 157 (212)
Q Consensus 105 ~~~~~~----~-~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~~ 157 (212)
+.+... . .+||+|++||||... . ..++...... +..+|++|++.+...
T Consensus 343 ~~~~l~~~~~~~~~fD~Vv~dPPr~g~----~-~~~~~l~~~~p~~ivyvsc~p~tlar 396 (433)
T 1uwv_A 343 LEEDVTKQPWAKNGFDKVLLDPARAGA----A-GVMQQIIKLEPIRIVYVSCNPATLAR 396 (433)
T ss_dssp TTSCCSSSGGGTTCCSEEEECCCTTCC----H-HHHHHHHHHCCSEEEEEESCHHHHHH
T ss_pred HHHHhhhhhhhcCCCCEEEECCCCccH----H-HHHHHHHhcCCCeEEEEECChHHHHh
Confidence 988432 2 279999999998632 2 3445444433 358899999887543
No 13
>3ldg_A Putative uncharacterized protein SMU.472; YPSC, methyltransferase, transferase; HET: SAH; 1.96A {Streptococcus mutans}
Probab=99.62 E-value=4.4e-15 Score=123.83 Aligned_cols=95 Identities=23% Similarity=0.440 Sum_probs=80.5
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC------------------------------------
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------------------------------------ 71 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~------------------------------------ 71 (212)
..+.+++.++....+. ++..++|++||+|.++++++..+.
T Consensus 178 l~e~LAaall~l~~~~----~~~~llDp~CGSGt~lIEAa~~a~~iapg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 253 (384)
T 3ldg_A 178 IKENMAAAIILLSNWF----PDKPFVDPTCGSGTFCIEAAMIGMNIAPGFNRDFAFEEWPWVDEALVTRVRNEADEQADY 253 (384)
T ss_dssp CCHHHHHHHHHHTTCC----TTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CcHHHHHHHHHHhCCC----CCCeEEEeCCcCCHHHHHHHHHhcCcCCCccccchhhhhccCCHHHHHHHHHHHHHhhhc
Confidence 3466777766555443 678999999999999999996532
Q ss_pred ---CeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 72 ---DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 72 ---~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+++|+|+|+.+++.|++|+..+++ .+++.++|+.+++...+||+|++||||+..
T Consensus 254 ~~~~~v~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~l~~~~~fD~Iv~NPPYG~r 313 (384)
T 3ldg_A 254 DIQLDISGFDFDGRMVEIARKNAREVGLEDVVKLKQMRLQDFKTNKINGVLISNPPYGER 313 (384)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCGGGCCCCCCSCEEEECCCCTTT
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHHCCccCCcCEEEECCchhhc
Confidence 2599999999999999999999987 599999999998876799999999999876
No 14
>3dmg_A Probable ribosomal RNA small subunit methyltransf; monomethyltranserase, 16S rRNA methyltransferase, N2 G1207 methyltransferase; HET: SAH; 1.55A {Thermus thermophilus} PDB: 3dmf_A* 3dmh_A* 2zul_A* 2zwv_A*
Probab=99.62 E-value=6.7e-15 Score=122.76 Aligned_cols=105 Identities=22% Similarity=0.341 Sum_probs=84.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-CcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-GHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.+++.+++.+. +|+++|+|+.+++.|++|+..++.+++++++|+.+.... .+||+|++||||++
T Consensus 232 ~~~~~VLDlGcG~G~~~~~la~~g~-~V~gvDis~~al~~A~~n~~~~~~~v~~~~~D~~~~~~~~~~fD~Ii~npp~~~ 310 (381)
T 3dmg_A 232 VRGRQVLDLGAGYGALTLPLARMGA-EVVGVEDDLASVLSLQKGLEANALKAQALHSDVDEALTEEARFDIIVTNPPFHV 310 (381)
T ss_dssp TTTCEEEEETCTTSTTHHHHHHTTC-EEEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTSCTTCCEEEEEECCCCCT
T ss_pred CCCCEEEEEeeeCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCeEEEEcchhhccccCCCeEEEEECCchhh
Confidence 4678999999999999999998855 999999999999999999999888899999999998765 49999999999997
Q ss_pred CC---CCchHHHHHHHHhhcC--ceEEEEecC
Q 028214 126 RK---KGVDMDFLSMALKVAS--QAVYSLHKT 152 (212)
Q Consensus 126 ~~---~~~~~~~l~~~~~~~~--~~~~~~~~~ 152 (212)
.. ......+++++.+.++ +.+++++++
T Consensus 311 ~~~~~~~~~~~~l~~~~~~LkpGG~l~iv~n~ 342 (381)
T 3dmg_A 311 GGAVILDVAQAFVNVAAARLRPGGVFFLVSNP 342 (381)
T ss_dssp TCSSCCHHHHHHHHHHHHHEEEEEEEEEEECT
T ss_pred cccccHHHHHHHHHHHHHhcCcCcEEEEEEcC
Confidence 42 2233456666666554 244444443
No 15
>3q87_B N6 adenine specific DNA methylase; SAM-methyltransferase, methyltransferase, methylation, trans activator-transferase complex; HET: SAM; 2.00A {Encephalitozoon cuniculi}
Probab=99.62 E-value=2.7e-14 Score=106.14 Aligned_cols=106 Identities=20% Similarity=0.310 Sum_probs=75.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.++.+|||+|||+|.+++.+++.+ +|+|+|+|+.+++. . .+++++++|+.+.....+||+|++||||++.
T Consensus 22 ~~~~~vLD~GcG~G~~~~~l~~~~--~v~gvD~s~~~~~~------~--~~~~~~~~d~~~~~~~~~fD~i~~n~~~~~~ 91 (170)
T 3q87_B 22 LEMKIVLDLGTSTGVITEQLRKRN--TVVSTDLNIRALES------H--RGGNLVRADLLCSINQESVDVVVFNPPYVPD 91 (170)
T ss_dssp CCSCEEEEETCTTCHHHHHHTTTS--EEEEEESCHHHHHT------C--SSSCEEECSTTTTBCGGGCSEEEECCCCBTT
T ss_pred CCCCeEEEeccCccHHHHHHHhcC--cEEEEECCHHHHhc------c--cCCeEEECChhhhcccCCCCEEEECCCCccC
Confidence 367799999999999999999876 99999999999988 1 2688999999884443599999999999975
Q ss_pred CCC-------chHHHHHHHHhhcC-ceEEEEe-cCchHHHHHHHH
Q 028214 127 KKG-------VDMDFLSMALKVAS-QAVYSLH-KTSTREHVKKAA 162 (212)
Q Consensus 127 ~~~-------~~~~~l~~~~~~~~-~~~~~~~-~~~~~~~~~~~~ 162 (212)
... .....+++..+..+ +.+++.. .....+.+....
T Consensus 92 ~~~~~~~~~~~~~~~~~~~~~~lpgG~l~~~~~~~~~~~~l~~~l 136 (170)
T 3q87_B 92 TDDPIIGGGYLGREVIDRFVDAVTVGMLYLLVIEANRPKEVLARL 136 (170)
T ss_dssp CCCTTTBCCGGGCHHHHHHHHHCCSSEEEEEEEGGGCHHHHHHHH
T ss_pred CccccccCCcchHHHHHHHHhhCCCCEEEEEEecCCCHHHHHHHH
Confidence 332 22344555444333 3444443 334444444444
No 16
>2ozv_A Hypothetical protein ATU0636; structural genomics, predicted transferase, predicted O-methyltransferase, PFAM PF05175; HET: MSE; 1.70A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=9e-15 Score=115.98 Aligned_cols=118 Identities=19% Similarity=0.299 Sum_probs=84.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhh---cCC--ceEEEEcccccCc--------C
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAAD---LEL--DIDFVQCDIRNLE--------W 110 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~---~~~--~v~~~~~d~~~~~--------~ 110 (212)
...++.+|||+|||+|.+++.++... ..+|+|+|+++.+++.|++|+.. ++. +++++++|+.+.. .
T Consensus 33 ~~~~~~~VLDlG~G~G~~~l~la~~~~~~~v~gvDi~~~~~~~a~~n~~~~~~~~l~~~v~~~~~D~~~~~~~~~~~~~~ 112 (260)
T 2ozv_A 33 ADDRACRIADLGAGAGAAGMAVAARLEKAEVTLYERSQEMAEFARRSLELPDNAAFSARIEVLEADVTLRAKARVEAGLP 112 (260)
T ss_dssp CCCSCEEEEECCSSSSHHHHHHHHHCTTEEEEEEESSHHHHHHHHHHTTSGGGTTTGGGEEEEECCTTCCHHHHHHTTCC
T ss_pred cccCCCEEEEeCChHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHhhhhCCCcceEEEEeCCHHHHhhhhhhhccC
Confidence 33467899999999999999999774 46899999999999999999988 776 5999999999872 1
Q ss_pred CCcccEEEEcCCCCCCC----------------CCchHHHHHHHHhhcC--ceEEEEecCchHHHHHHHH
Q 028214 111 RGHVDTVVMNPPFGTRK----------------KGVDMDFLSMALKVAS--QAVYSLHKTSTREHVKKAA 162 (212)
Q Consensus 111 ~~~~D~i~~nppy~~~~----------------~~~~~~~l~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 162 (212)
..+||+|++||||.... ......+++.+.+.++ +.+++++.+.....+....
T Consensus 113 ~~~fD~Vv~nPPy~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~~~~l 182 (260)
T 2ozv_A 113 DEHFHHVIMNPPYNDAGDRRTPDALKAEAHAMTEGLFEDWIRTASAIMVSGGQLSLISRPQSVAEIIAAC 182 (260)
T ss_dssp TTCEEEEEECCCC---------------------CCHHHHHHHHHHHEEEEEEEEEEECGGGHHHHHHHH
T ss_pred CCCcCEEEECCCCcCCCCCCCcCHHHHHHhhcCcCCHHHHHHHHHHHcCCCCEEEEEEcHHHHHHHHHHH
Confidence 33899999999998642 1113345665555543 2444445544444444433
No 17
>3tma_A Methyltransferase; thump domain; 2.05A {Thermus thermophilus}
Probab=99.62 E-value=5.7e-15 Score=122.10 Aligned_cols=111 Identities=33% Similarity=0.344 Sum_probs=84.0
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcc
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d 104 (212)
..+.++..++.... ..++.++||+|||+|.++++++..+ ..+++|+|+|+.+++.|++|++..+. ++++.++|
T Consensus 187 l~~~la~~l~~~~~----~~~~~~vLD~gcGsG~~~ie~a~~~~~~~~v~g~Di~~~~i~~a~~n~~~~g~~~i~~~~~D 262 (354)
T 3tma_A 187 LTPVLAQALLRLAD----ARPGMRVLDPFTGSGTIALEAASTLGPTSPVYAGDLDEKRLGLAREAALASGLSWIRFLRAD 262 (354)
T ss_dssp CCHHHHHHHHHHTT----CCTTCCEEESSCTTSHHHHHHHHHHCTTSCEEEEESCHHHHHHHHHHHHHTTCTTCEEEECC
T ss_pred cCHHHHHHHHHHhC----CCCCCEEEeCCCCcCHHHHHHHHhhCCCceEEEEECCHHHHHHHHHHHHHcCCCceEEEeCC
Confidence 33455555544333 3477899999999999999999863 36899999999999999999999887 79999999
Q ss_pred cccCcCCC-cccEEEEcCCCCCCCCCc------hHHHHHHHHhhc
Q 028214 105 IRNLEWRG-HVDTVVMNPPFGTRKKGV------DMDFLSMALKVA 142 (212)
Q Consensus 105 ~~~~~~~~-~~D~i~~nppy~~~~~~~------~~~~l~~~~~~~ 142 (212)
+.+++... .||+|++||||....... ...+++.+.+..
T Consensus 263 ~~~~~~~~~~~D~Ii~npPyg~r~~~~~~~~~~~~~~~~~~~~~L 307 (354)
T 3tma_A 263 ARHLPRFFPEVDRILANPPHGLRLGRKEGLFHLYWDFLRGALALL 307 (354)
T ss_dssp GGGGGGTCCCCSEEEECCCSCC----CHHHHHHHHHHHHHHHHTS
T ss_pred hhhCccccCCCCEEEECCCCcCccCCcccHHHHHHHHHHHHHHhc
Confidence 99987654 789999999998753211 134555555554
No 18
>3gdh_A Trimethylguanosine synthase homolog; M7G, CAP, dimethyltransferase, usnRNA, snoRNA, telomerase, cytoplasm, methyltransferase, nucleus; HET: MGP SAH; 2.00A {Homo sapiens} PDB: 3egi_A*
Probab=99.61 E-value=4.6e-14 Score=110.24 Aligned_cols=95 Identities=34% Similarity=0.417 Sum_probs=79.5
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccc
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDI 105 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~ 105 (212)
++..+...++..+... .++.+|||+|||+|.+++.+++.+ .+|+|+|+|+.+++.|++|+..++. +++++++|+
T Consensus 61 ~~~~~~~~l~~~~~~~---~~~~~vLD~gcG~G~~~~~la~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~ 136 (241)
T 3gdh_A 61 TPEKIAEHIAGRVSQS---FKCDVVVDAFCGVGGNTIQFALTG-MRVIAIDIDPVKIALARNNAEVYGIADKIEFICGDF 136 (241)
T ss_dssp CCHHHHHHHHHHHHHH---SCCSEEEETTCTTSHHHHHHHHTT-CEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCH
T ss_pred CHHHHHHHHHHHhhhc---cCCCEEEECccccCHHHHHHHHcC-CEEEEEECCHHHHHHHHHHHHHcCCCcCeEEEECCh
Confidence 3344455555444433 267899999999999999999886 6999999999999999999998886 799999999
Q ss_pred ccCcCCCcccEEEEcCCCCCC
Q 028214 106 RNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 106 ~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+++...+||+|++||||++.
T Consensus 137 ~~~~~~~~~D~v~~~~~~~~~ 157 (241)
T 3gdh_A 137 LLLASFLKADVVFLSPPWGGP 157 (241)
T ss_dssp HHHGGGCCCSEEEECCCCSSG
T ss_pred HHhcccCCCCEEEECCCcCCc
Confidence 998765699999999999875
No 19
>2qm3_A Predicted methyltransferase; putative methyltransferase, structural genomics, pyrococcus PSI-2, protein structure initiative; HET: MSE; 2.05A {Pyrococcus furiosus dsm 3638}
Probab=99.61 E-value=2.2e-14 Score=119.41 Aligned_cols=130 Identities=22% Similarity=0.306 Sum_probs=98.6
Q ss_pred HHhccCCCCCCccccccc-CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHH
Q 028214 8 SVLGDLEQFSNPKVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLE 85 (212)
Q Consensus 8 ~~~~~l~~~~~~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~ 85 (212)
.+.+.++.+..+...+.+ |.+.......++.... ....++++|||+| |+|.+++.++..+. .+|+++|+|+.+++
T Consensus 133 ~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~--~~~~~~~~VLDlG-G~G~~~~~la~~~~~~~v~~vDi~~~~l~ 209 (373)
T 2qm3_A 133 QFREIVKDRPEPLHEFDQAYVTPETTVARVILMHT--RGDLENKDIFVLG-DDDLTSIALMLSGLPKRIAVLDIDERLTK 209 (373)
T ss_dssp HHHHHHTTCCCCCGGGTCCCBCHHHHHHHHHHHHH--TTCSTTCEEEEES-CTTCHHHHHHHHTCCSEEEEECSCHHHHH
T ss_pred HHHHHHhcCCccchhcCCeecCHHHHHHHHHHHhh--cCCCCCCEEEEEC-CCCHHHHHHHHhCCCCEEEEEECCHHHHH
Confidence 333334555555556666 6777666666554422 2334688999999 99999999998764 69999999999999
Q ss_pred HHHHHHhhcCC-ceEEEEccccc-CcC--CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 86 LASENAADLEL-DIDFVQCDIRN-LEW--RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 86 ~a~~~~~~~~~-~v~~~~~d~~~-~~~--~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.|++|++.++. +++++++|+.+ ++. ..+||+|++||||+... ...+++++.+.++
T Consensus 210 ~a~~~~~~~g~~~v~~~~~D~~~~l~~~~~~~fD~Vi~~~p~~~~~---~~~~l~~~~~~Lk 268 (373)
T 2qm3_A 210 FIEKAANEIGYEDIEIFTFDLRKPLPDYALHKFDTFITDPPETLEA---IRAFVGRGIATLK 268 (373)
T ss_dssp HHHHHHHHHTCCCEEEECCCTTSCCCTTTSSCBSEEEECCCSSHHH---HHHHHHHHHHTBC
T ss_pred HHHHHHHHcCCCCEEEEEChhhhhchhhccCCccEEEECCCCchHH---HHHHHHHHHHHcc
Confidence 99999998887 89999999998 543 23899999999997642 4677788877764
No 20
>2b3t_A Protein methyltransferase HEMK; translation termination, methylation, conformational changes; HET: SAH; 3.10A {Escherichia coli} SCOP: c.66.1.30 PDB: 1t43_A*
Probab=99.61 E-value=3.1e-14 Score=113.72 Aligned_cols=93 Identities=24% Similarity=0.307 Sum_probs=76.1
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW 110 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~ 110 (212)
...++..+...+. .++.+|||+|||+|.+++.++.. +..+|+++|+|+.+++.|++|+..++. +++++++|+.+...
T Consensus 95 te~l~~~~l~~~~-~~~~~vLDlG~GsG~~~~~la~~~~~~~v~~vD~s~~~l~~a~~n~~~~~~~~v~~~~~d~~~~~~ 173 (276)
T 2b3t_A 95 TECLVEQALARLP-EQPCRILDLGTGTGAIALALASERPDCEIIAVDRMPDAVSLAQRNAQHLAIKNIHILQSDWFSALA 173 (276)
T ss_dssp HHHHHHHHHHHSC-SSCCEEEEETCTTSHHHHHHHHHCTTSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCSTTGGGT
T ss_pred HHHHHHHHHHhcc-cCCCEEEEecCCccHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEcchhhhcc
Confidence 4444444444433 46779999999999999999954 456999999999999999999998876 79999999988654
Q ss_pred CCcccEEEEcCCCCCC
Q 028214 111 RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 111 ~~~~D~i~~nppy~~~ 126 (212)
..+||+|++||||+..
T Consensus 174 ~~~fD~Iv~npPy~~~ 189 (276)
T 2b3t_A 174 GQQFAMIVSNPPYIDE 189 (276)
T ss_dssp TCCEEEEEECCCCBCT
T ss_pred cCCccEEEECCCCCCc
Confidence 4589999999999864
No 21
>3k6r_A Putative transferase PH0793; structural genomics, PSI structure initiative, midwest center for structural genomic unknown function; 2.10A {Pyrococcus horikoshii} PDB: 3a25_A* 3a26_A*
Probab=99.60 E-value=7.3e-15 Score=117.23 Aligned_cols=91 Identities=24% Similarity=0.344 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
.++++|||+|||+|.+++.+++.+.++|+++|+|+.+++.+++|++.|++ +++++++|+.++.....||.|++|||+.
T Consensus 124 ~~g~~VlD~~aG~G~~~i~~a~~g~~~V~avD~np~a~~~~~~N~~~N~v~~~v~~~~~D~~~~~~~~~~D~Vi~~~p~~ 203 (278)
T 3k6r_A 124 KPDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVR 203 (278)
T ss_dssp CTTCEEEETTCTTTTTTHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSS
T ss_pred CCCCEEEEecCcCcHHHHHHHHhcCCeEEEEECCHHHHHHHHHHHHHcCCCCcEEEEeCcHHHhccccCCCEEEECCCCc
Confidence 37899999999999999999988878999999999999999999999998 6999999999988777999999999965
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
. ..+++.+++..+
T Consensus 204 ~------~~~l~~a~~~lk 216 (278)
T 3k6r_A 204 T------HEFIPKALSIAK 216 (278)
T ss_dssp G------GGGHHHHHHHEE
T ss_pred H------HHHHHHHHHHcC
Confidence 3 246666666654
No 22
>2jjq_A Uncharacterized RNA methyltransferase pyrab10780; metal-binding, tRNA methyltransferase, S-adenosyl-L-methionine, iron, 4Fe-4S, iron-sulfur; HET: SAH; 1.8A {Pyrococcus abyssi} PDB: 2vs1_A*
Probab=99.60 E-value=2.9e-14 Score=120.45 Aligned_cols=122 Identities=20% Similarity=0.266 Sum_probs=93.9
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~ 105 (212)
|+.++.....++..+.. ..++.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++|++.++..++++++|+
T Consensus 271 ~q~n~~~~e~l~~~~~~---~~~~~~VLDlgcG~G~~sl~la~~-~~~V~gvD~s~~ai~~A~~n~~~ngl~v~~~~~d~ 346 (425)
T 2jjq_A 271 FQTNSYQAVNLVRKVSE---LVEGEKILDMYSGVGTFGIYLAKR-GFNVKGFDSNEFAIEMARRNVEINNVDAEFEVASD 346 (425)
T ss_dssp CCSBHHHHHHHHHHHHH---HCCSSEEEEETCTTTHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred cccCHHHHHHHHHHhhc---cCCCCEEEEeeccchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh
Confidence 55555555555555444 236789999999999999999986 45999999999999999999998876799999999
Q ss_pred ccCcCCCcccEEEEcCCCCCCCCCchHHHHHHHHhhc-CceEEEEecCchHH
Q 028214 106 RNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVA-SQAVYSLHKTSTRE 156 (212)
Q Consensus 106 ~~~~~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~~~~ 156 (212)
.++... +||+|++|||+. +.....++.+.... ++.+|++|++.+..
T Consensus 347 ~~~~~~-~fD~Vv~dPPr~----g~~~~~~~~l~~l~p~givyvsc~p~tla 393 (425)
T 2jjq_A 347 REVSVK-GFDTVIVDPPRA----GLHPRLVKRLNREKPGVIVYVSCNPETFA 393 (425)
T ss_dssp TTCCCT-TCSEEEECCCTT----CSCHHHHHHHHHHCCSEEEEEESCHHHHH
T ss_pred HHcCcc-CCCEEEEcCCcc----chHHHHHHHHHhcCCCcEEEEECChHHHH
Confidence 988654 899999999963 34444555444433 35888999887643
No 23
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=99.60 E-value=1.3e-14 Score=120.76 Aligned_cols=107 Identities=17% Similarity=0.252 Sum_probs=80.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEcccccCcCCCcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDIRNLEWRGHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~----~v~~~~~d~~~~~~~~~~D~i~~ 119 (212)
...++.+|||+|||+|.+++.+++.+ ..+|+++|+|+.+++.|++|+..++. +++++.+|+.+.....+||+|++
T Consensus 219 ~~~~~~~VLDlGcG~G~~s~~la~~~p~~~V~gvD~s~~al~~Ar~n~~~ngl~~~~~v~~~~~D~~~~~~~~~fD~Ii~ 298 (375)
T 4dcm_A 219 PENLEGEIVDLGCGNGVIGLTLLDKNPQAKVVFVDESPMAVASSRLNVETNMPEALDRCEFMINNALSGVEPFRFNAVLC 298 (375)
T ss_dssp CCSCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGGGEEEEECSTTTTCCTTCEEEEEE
T ss_pred cccCCCeEEEEeCcchHHHHHHHHHCCCCEEEEEECcHHHHHHHHHHHHHcCCCcCceEEEEechhhccCCCCCeeEEEE
Confidence 44466899999999999999999874 56999999999999999999998875 58899999998655458999999
Q ss_pred cCCCCCC---CCCchHHHHHHHHhhcC--ceEEEEec
Q 028214 120 NPPFGTR---KKGVDMDFLSMALKVAS--QAVYSLHK 151 (212)
Q Consensus 120 nppy~~~---~~~~~~~~l~~~~~~~~--~~~~~~~~ 151 (212)
||||++. .......+++++.+.++ +.++++++
T Consensus 299 nppfh~~~~~~~~~~~~~l~~~~~~LkpgG~l~iv~n 335 (375)
T 4dcm_A 299 NPPFHQQHALTDNVAWEMFHHARRCLKINGELYIVAN 335 (375)
T ss_dssp CCCC-------CCHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred CCCcccCcccCHHHHHHHHHHHHHhCCCCcEEEEEEE
Confidence 9999864 23333356666665543 24444443
No 24
>3k0b_A Predicted N6-adenine-specific DNA methylase; methylase,PF01170, putative RNA methylase, PSI,MCSG, structu genomics; 1.50A {Listeria monocytogenes str}
Probab=99.59 E-value=3.6e-15 Score=124.78 Aligned_cols=95 Identities=29% Similarity=0.471 Sum_probs=79.4
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC------------------------------------
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------------------------------------ 71 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~------------------------------------ 71 (212)
..+.+++.++....+ .++..++|++||+|.++++++..+.
T Consensus 185 l~e~lAa~ll~l~~~----~~~~~vlDp~CGSGt~~ieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~ 260 (393)
T 3k0b_A 185 IKETMAAALVLLTSW----HPDRPFYDPVCGSGTIPIEAALIGQNIAPGFNREFVSETWDWMPKQVWADARQEAEDLANY 260 (393)
T ss_dssp CCHHHHHHHHHHSCC----CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHCCT
T ss_pred CcHHHHHHHHHHhCC----CCCCeEEEcCCCCCHHHHHHHHHhcCcCCCccccchhhccccCCHHHHHHHHHHHHHhhcc
Confidence 345666666654443 3678999999999999999997532
Q ss_pred ---CeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 72 ---DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 72 ---~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+|+|+|+|+.+++.|++|+..++. ++++.++|+.+++...+||+|++||||+..
T Consensus 261 ~~~~~V~GvDid~~al~~Ar~Na~~~gl~~~I~~~~~D~~~~~~~~~fD~Iv~NPPYg~r 320 (393)
T 3k0b_A 261 DQPLNIIGGDIDARLIEIAKQNAVEAGLGDLITFRQLQVADFQTEDEYGVVVANPPYGER 320 (393)
T ss_dssp TCCCCEEEEESCHHHHHHHHHHHHHTTCTTCSEEEECCGGGCCCCCCSCEEEECCCCCCS
T ss_pred cCCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChHhCCCCCCCCEEEECCCCccc
Confidence 3599999999999999999999887 599999999998876799999999999865
No 25
>3ldu_A Putative methylase; structural genomics, PSI-2, protein structure initiative, midwest center for structural genomics, MCSG; HET: MSE GTP; 1.70A {Clostridium difficile}
Probab=99.59 E-value=3.5e-15 Score=124.68 Aligned_cols=94 Identities=28% Similarity=0.491 Sum_probs=78.1
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC-------------------------------------
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------------------------------------- 71 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~------------------------------------- 71 (212)
.+.+++.++.... ..++.++||+|||+|.++++++..+.
T Consensus 180 ~e~lAa~ll~~~~----~~~~~~vlDp~CGSGt~lieaa~~~~~~apg~~R~f~f~~w~~~~~~~w~~~~~~a~~~~~~~ 255 (385)
T 3ldu_A 180 RETLAAGLIYLTP----WKAGRVLVDPMCGSGTILIEAAMIGINMAPGLNREFISEKWRTLDKKIWWDVRKDAFNKIDNE 255 (385)
T ss_dssp CHHHHHHHHHTSC----CCTTSCEEETTCTTCHHHHHHHHHHTTCCTTTTSCCGGGGCTTSCHHHHHHHHHHHHHHSCCS
T ss_pred cHHHHHHHHHhhC----CCCCCeEEEcCCCCCHHHHHHHHHHhhhCCCcccccchhhcccCCHHHHHHHHHHHHHHhhcc
Confidence 3455555554333 34678999999999999999987632
Q ss_pred --CeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 72 --DQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 72 --~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+|+|+|+|+.+++.|++|+..++. ++++.++|+.+++.+.+||+|++||||...
T Consensus 256 ~~~~V~GvDid~~ai~~Ar~Na~~~gl~~~i~~~~~D~~~l~~~~~~D~Iv~NPPyg~r 314 (385)
T 3ldu_A 256 SKFKIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYGER 314 (385)
T ss_dssp CCCCEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCGGGCCCSCBSCEEEECCCCCCS
T ss_pred CCceEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhcCcCCCCcEEEECCCCcCc
Confidence 3699999999999999999999987 699999999998876799999999999865
No 26
>3bt7_A TRNA (uracil-5-)-methyltransferase; methyluridine, methyltransferase, TRMA, RUMT; HET: 5MU; 2.43A {Escherichia coli}
Probab=99.59 E-value=1.7e-14 Score=119.98 Aligned_cols=124 Identities=19% Similarity=0.251 Sum_probs=94.8
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d 104 (212)
|+.++.....+...+..... ..+.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|++|++.++. +++++++|
T Consensus 192 ~Q~n~~~~~~l~~~~~~~~~-~~~~~vLDl~cG~G~~~l~la~~-~~~V~gvd~~~~ai~~a~~n~~~ng~~~v~~~~~d 269 (369)
T 3bt7_A 192 TQPNAAMNIQMLEWALDVTK-GSKGDLLELYCGNGNFSLALARN-FDRVLATEIAKPSVAAAQYNIAANHIDNVQIIRMA 269 (369)
T ss_dssp CCSBHHHHHHHHHHHHHHTT-TCCSEEEEESCTTSHHHHHHGGG-SSEEEEECCCHHHHHHHHHHHHHTTCCSEEEECCC
T ss_pred ecCCHHHHHHHHHHHHHHhh-cCCCEEEEccCCCCHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHHcCCCceEEEECC
Confidence 55566666666666655533 24678999999999999999985 56999999999999999999999887 89999999
Q ss_pred cccCcC--C---------------CcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHH
Q 028214 105 IRNLEW--R---------------GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTRE 156 (212)
Q Consensus 105 ~~~~~~--~---------------~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (212)
+.++.. . .+||+|++|||+. +.....++.. +..+..+|++|++.+..
T Consensus 270 ~~~~~~~~~~~~~~~~l~~~~~~~~~fD~Vv~dPPr~----g~~~~~~~~l-~~~g~ivyvsc~p~t~a 333 (369)
T 3bt7_A 270 AEEFTQAMNGVREFNRLQGIDLKSYQCETIFVDPPRS----GLDSETEKMV-QAYPRILYISCNPETLC 333 (369)
T ss_dssp SHHHHHHHSSCCCCTTGGGSCGGGCCEEEEEECCCTT----CCCHHHHHHH-TTSSEEEEEESCHHHHH
T ss_pred HHHHHHHHhhccccccccccccccCCCCEEEECcCcc----ccHHHHHHHH-hCCCEEEEEECCHHHHH
Confidence 987532 1 2699999999975 3444444443 34556899999987754
No 27
>4dzr_A Protein-(glutamine-N5) methyltransferase, release specific; structural genomics, PSI-biology; 2.55A {Alicyclobacillus acidocaldarius subsp}
Probab=99.59 E-value=1.9e-15 Score=115.51 Aligned_cols=96 Identities=23% Similarity=0.280 Sum_probs=59.4
Q ss_pred HHHHHHHHHHHhhcCC-CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC
Q 028214 31 HIASRMLYTAENSFGD-VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~-~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (212)
.....++..+...+.. .++.+|||+|||+|.++..+++.. ..+++|+|+|+.+++.|++++..++.+++++++|+.+.
T Consensus 12 ~~~~~~~~~~~~~l~~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 91 (215)
T 4dzr_A 12 PDTEVLVEEAIRFLKRMPSGTRVIDVGTGSGCIAVSIALACPGVSVTAVDLSMDALAVARRNAERFGAVVDWAAADGIEW 91 (215)
T ss_dssp HHHHHHHHHHHHHHTTCCTTEEEEEEESSBCHHHHHHHHHCTTEEEEEEECC-------------------CCHHHHHHH
T ss_pred ccHHHHHHHHHHHhhhcCCCCEEEEecCCHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhCCceEEEEcchHhh
Confidence 3344444445544433 577899999999999999999874 34899999999999999999988776789999999885
Q ss_pred cCC-----CcccEEEEcCCCCCC
Q 028214 109 EWR-----GHVDTVVMNPPFGTR 126 (212)
Q Consensus 109 ~~~-----~~~D~i~~nppy~~~ 126 (212)
... .+||+|++||||+..
T Consensus 92 ~~~~~~~~~~fD~i~~npp~~~~ 114 (215)
T 4dzr_A 92 LIERAERGRPWHAIVSNPPYIPT 114 (215)
T ss_dssp HHHHHHTTCCBSEEEECCCCCC-
T ss_pred hhhhhhccCcccEEEECCCCCCC
Confidence 443 589999999999765
No 28
>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*
Probab=99.58 E-value=2.2e-14 Score=107.60 Aligned_cols=79 Identities=22% Similarity=0.299 Sum_probs=65.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCc--CCCcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--WRGHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~--~~~~~D~i~~nppy 123 (212)
.++.+|||+|||+|.+++.+++. ..+|+|+|+|+.+++.|+++++.++. +++++++|..++. ...+||+|++|++|
T Consensus 21 ~~~~~vLDiGcG~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~~~~~~l~~~~~~~fD~v~~~~~~ 99 (185)
T 3mti_A 21 DDESIVVDATMGNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELILDGHENLDHYVREPIRAAIFNLGY 99 (185)
T ss_dssp CTTCEEEESCCTTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEESCGGGGGGTCCSCEEEEEEEEC-
T ss_pred CCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCcHHHHHhhccCCcCEEEEeCCC
Confidence 46789999999999999999987 56999999999999999999998876 7999998887743 23489999999888
Q ss_pred CCC
Q 028214 124 GTR 126 (212)
Q Consensus 124 ~~~ 126 (212)
.+.
T Consensus 100 ~~~ 102 (185)
T 3mti_A 100 LPS 102 (185)
T ss_dssp ---
T ss_pred CCC
Confidence 654
No 29
>2b78_A Hypothetical protein SMU.776; structure genomics, methyltransferase, caries, structural genomics, unknown function; 2.00A {Streptococcus mutans} SCOP: b.122.1.9 c.66.1.51 PDB: 3ldf_A*
Probab=99.58 E-value=1.3e-13 Score=115.30 Aligned_cols=126 Identities=17% Similarity=0.218 Sum_probs=89.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcC-----CCcccEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-----RGHVDTVV 118 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~-----~~~~D~i~ 118 (212)
.++++|||+|||+|.+++.+++.+..+|+++|+|+.+++.|++|++.++. +++++++|+.+... ..+||+|+
T Consensus 211 ~~~~~VLDl~cGtG~~sl~la~~ga~~V~~vD~s~~al~~A~~N~~~n~~~~~~v~~~~~D~~~~l~~~~~~~~~fD~Ii 290 (385)
T 2b78_A 211 AAGKTVLNLFSYTAAFSVAAAMGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHLTYDIII 290 (385)
T ss_dssp TBTCEEEEETCTTTHHHHHHHHTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTCCEEEEE
T ss_pred cCCCeEEEEeeccCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHHhCCCccEEE
Confidence 36789999999999999999987777999999999999999999999886 69999999987532 23899999
Q ss_pred EcCCCCCCC----CCch---HHHHHHHHhhcC--ceEEEEecCch--HHHHHHHHHhhcCCccee
Q 028214 119 MNPPFGTRK----KGVD---MDFLSMALKVAS--QAVYSLHKTST--REHVKKAALRDFNASSAE 172 (212)
Q Consensus 119 ~nppy~~~~----~~~~---~~~l~~~~~~~~--~~~~~~~~~~~--~~~~~~~~~r~l~~~~~~ 172 (212)
+|||+.... .... ..++..+.+..+ +.+++++.+.. ++.+.+.........+..
T Consensus 291 ~DPP~~~~~~~~~~~~~~~~~~ll~~~~~~L~pgG~l~~~~~~~~~~~~~~~~~i~~~~~~~g~~ 355 (385)
T 2b78_A 291 IDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNAANMTVSQFKKQIEKGFGKQKHT 355 (385)
T ss_dssp ECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECCTTSCHHHHHHHHHHHHTTCCCE
T ss_pred ECCCCCCCChhhHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCCcCCHHHHHHHHHHHHHHcCCc
Confidence 999996321 1111 123444455543 35566665543 455555444444433444
No 30
>3c0k_A UPF0064 protein YCCW; PUA domain, adoMet dependent methyltransferase fold; 2.00A {Escherichia coli K12}
Probab=99.58 E-value=3.3e-14 Score=119.22 Aligned_cols=106 Identities=24% Similarity=0.325 Sum_probs=84.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcC-----CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-----RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~-----~~~~D~i~~ 119 (212)
++++|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++|++.++. +++++++|+.++.. ..+||+|++
T Consensus 220 ~~~~VLDl~cG~G~~sl~la~~g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~v~~~~~D~~~~~~~~~~~~~~fD~Ii~ 299 (396)
T 3c0k_A 220 ENKRVLNCFSYTGGFAVSALMGGCSQVVSVDTSQEALDIARQNVELNKLDLSKAEFVRDDVFKLLRTYRDRGEKFDVIVM 299 (396)
T ss_dssp TTCEEEEESCTTCSHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred CCCeEEEeeccCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCccceEEEECCHHHHHHHHHhcCCCCCEEEE
Confidence 7789999999999999999998777999999999999999999999887 79999999988643 238999999
Q ss_pred cCCCCCCCC-------CchHHHHHHHHhhcC--ceEEEEecCc
Q 028214 120 NPPFGTRKK-------GVDMDFLSMALKVAS--QAVYSLHKTS 153 (212)
Q Consensus 120 nppy~~~~~-------~~~~~~l~~~~~~~~--~~~~~~~~~~ 153 (212)
|||+..... .....++..+.+..+ +.+++++.+.
T Consensus 300 dpP~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 342 (396)
T 3c0k_A 300 DPPKFVENKSQLMGACRGYKDINMLAIQLLNEGGILLTFSCSG 342 (396)
T ss_dssp CCSSTTTCSSSSSCCCTHHHHHHHHHHHTEEEEEEEEEEECCT
T ss_pred CCCCCCCChhHHHHHHHHHHHHHHHHHHhcCCCcEEEEEeCCC
Confidence 999865422 233456666666654 3556555554
No 31
>2f8l_A Hypothetical protein LMO1582; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE SAM; 2.20A {Listeria monocytogenes} SCOP: c.66.1.45
Probab=99.58 E-value=1.3e-14 Score=119.60 Aligned_cols=106 Identities=19% Similarity=0.165 Sum_probs=80.8
Q ss_pred cccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC------CeEEEEeCChHHHHHHHHHHhhc
Q 028214 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------DQVIAIDIDSDSLELASENAADL 94 (212)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~------~~v~~~D~~~~~~~~a~~~~~~~ 94 (212)
..+.+|.|+..+...+...+.......++.+|||+|||+|.+++.+++... .+++|+|+++.+++.|+.|+...
T Consensus 103 ~~~g~~~TP~~i~~~~~~ll~~l~~~~~~~~VlDp~cGsG~~l~~~~~~~~~~~~~~~~v~GiDi~~~~~~~a~~n~~~~ 182 (344)
T 2f8l_A 103 IQVNHQMTPDSIGFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLISLALVGADLQ 182 (344)
T ss_dssp CCGGGCCCCHHHHHHHHHHHHHHHTTCSEEEEEETTCTTSHHHHHHHHHHHTTSSCEEEEEEEESCHHHHHHHHHHHHHH
T ss_pred cccCcCCChHHHHHHHHHHHHHhcCCCCCCEEEeCCCCccHHHHHHHHHHHHhcCCCceEEEEECCHHHHHHHHHHHHhC
Confidence 345667788766544332222111233567999999999999999986531 58999999999999999999887
Q ss_pred CCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 95 ELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 95 ~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
+.+++++++|........+||+|++||||+..
T Consensus 183 g~~~~i~~~D~l~~~~~~~fD~Ii~NPPfg~~ 214 (344)
T 2f8l_A 183 RQKMTLLHQDGLANLLVDPVDVVISDLPVGYY 214 (344)
T ss_dssp TCCCEEEESCTTSCCCCCCEEEEEEECCCSEE
T ss_pred CCCceEEECCCCCccccCCccEEEECCCCCCc
Confidence 77889999998876554589999999998653
No 32
>1nv8_A HEMK protein; class I adoMet-dependent methyltransferase; HET: SAM MEQ; 2.20A {Thermotoga maritima} SCOP: c.66.1.30 PDB: 1nv9_A* 1vq1_A* 1sg9_A*
Probab=99.57 E-value=4e-14 Score=113.70 Aligned_cols=78 Identities=24% Similarity=0.382 Sum_probs=68.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcc---cEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHV---DTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~---D~i~~npp 122 (212)
++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|++|+..++. +++++++|+.+... .+| |+|++|||
T Consensus 123 ~~~~vLDlG~GsG~~~~~la~~~~~~v~~vDis~~al~~A~~n~~~~~l~~~v~~~~~D~~~~~~-~~f~~~D~IvsnPP 201 (284)
T 1nv8_A 123 GIKTVADIGTGSGAIGVSVAKFSDAIVFATDVSSKAVEIARKNAERHGVSDRFFVRKGEFLEPFK-EKFASIEMILSNPP 201 (284)
T ss_dssp TCCEEEEESCTTSHHHHHHHHHSSCEEEEEESCHHHHHHHHHHHHHTTCTTSEEEEESSTTGGGG-GGTTTCCEEEECCC
T ss_pred CCCEEEEEeCchhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCceEEEECcchhhcc-cccCCCCEEEEcCC
Confidence 5679999999999999999976556999999999999999999998887 49999999988543 378 99999999
Q ss_pred CCCC
Q 028214 123 FGTR 126 (212)
Q Consensus 123 y~~~ 126 (212)
|...
T Consensus 202 yi~~ 205 (284)
T 1nv8_A 202 YVKS 205 (284)
T ss_dssp CBCG
T ss_pred CCCc
Confidence 9854
No 33
>1o9g_A RRNA methyltransferase; antibiotic resistance, Se-MAD; 1.5A {Streptomyces viridochromogenes} SCOP: c.66.1.29 PDB: 1o9h_A
Probab=99.56 E-value=1.2e-14 Score=114.44 Aligned_cols=98 Identities=31% Similarity=0.395 Sum_probs=76.6
Q ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhc---CC--c----
Q 028214 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADL---EL--D---- 97 (212)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~---~~--~---- 97 (212)
..++..++..+...+...++.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|++|+... +. +
T Consensus 33 ~~la~~l~~~~l~~~~~~~~~~vLD~gcGsG~~~~~la~~~~~~~~~v~gvDis~~~l~~A~~~~~~~~~~~~~~~~~~~ 112 (250)
T 1o9g_A 33 VRLATEIFQRALARLPGDGPVTLWDPCCGSGYLLTVLGLLHRRSLRQVIASDVDPAPLELAAKNLALLSPAGLTARELER 112 (250)
T ss_dssp HHHHHHHHHHHHHTSSCCSCEEEEETTCTTSHHHHHHHHHTGGGEEEEEEEESCHHHHHHHHHHHHTTSHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcccCCCCeEEECCCCCCHHHHHHHHHhccCCCeEEEEECCHHHHHHHHHHHHHhhhccccccchhh
Confidence 4445567766666544446779999999999999999875 2458999999999999999988765 33 2
Q ss_pred ---------------------eE-------------EEEcccccCcC-----CC-cccEEEEcCCCCCCC
Q 028214 98 ---------------------ID-------------FVQCDIRNLEW-----RG-HVDTVVMNPPFGTRK 127 (212)
Q Consensus 98 ---------------------v~-------------~~~~d~~~~~~-----~~-~~D~i~~nppy~~~~ 127 (212)
++ +.++|+.+... .. +||+|++||||....
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~fD~Iv~npp~~~~~ 182 (250)
T 1o9g_A 113 REQSERFGKPSYLEAAQAARRLRERLTAEGGALPCAIRTADVFDPRALSAVLAGSAPDVVLTDLPYGERT 182 (250)
T ss_dssp HHHHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCEEEEECCTTCGGGHHHHHTTCCCSEEEEECCGGGSS
T ss_pred hhhhhhcccccchhhhhhhhhhhhhccccccccccceeecccccccccccccCCCCceEEEeCCCeeccc
Confidence 66 99999988652 33 899999999998653
No 34
>2frn_A Hypothetical protein PH0793; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Pyrococcus horikoshii OT3} PDB: 3k6r_A 3a25_A* 3a26_A*
Probab=99.56 E-value=1.5e-14 Score=115.88 Aligned_cols=89 Identities=25% Similarity=0.357 Sum_probs=75.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
++++|||+|||+|.+++.+++.+..+|+|+|+|+.+++.|++|++.++. +++++++|+.++....+||+|++|||+..
T Consensus 125 ~~~~VLDlgcG~G~~~~~la~~~~~~V~~vD~s~~~~~~a~~n~~~n~~~~~v~~~~~D~~~~~~~~~fD~Vi~~~p~~~ 204 (278)
T 2frn_A 125 PDELVVDMFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYVVRT 204 (278)
T ss_dssp TTCEEEETTCTTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCCCSCEEEEEECCCSSG
T ss_pred CCCEEEEecccCCHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECCHHHhcccCCccEEEECCchhH
Confidence 5889999999999999999988765899999999999999999998887 49999999999887559999999999653
Q ss_pred CCCCchHHHHHHHHhhc
Q 028214 126 RKKGVDMDFLSMALKVA 142 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~ 142 (212)
..+++.+.+.+
T Consensus 205 ------~~~l~~~~~~L 215 (278)
T 2frn_A 205 ------HEFIPKALSIA 215 (278)
T ss_dssp ------GGGHHHHHHHE
T ss_pred ------HHHHHHHHHHC
Confidence 23445444444
No 35
>1dus_A MJ0882; hypothetical protein, methanococcus jannaschii, structural genomics, BSGC structure funded by NIH; 1.80A {Methanocaldococcus jannaschii} SCOP: c.66.1.4
Probab=99.56 E-value=8.3e-14 Score=104.54 Aligned_cols=95 Identities=23% Similarity=0.355 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-c--eEEEEcccccCcCCCcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNLEWRGHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~--v~~~~~d~~~~~~~~~~D~i~~nppy 123 (212)
.++.+|||+|||+|.++..+++. ..+++++|+++.+++.+++++..++. + ++++++|+.+.....+||+|++||||
T Consensus 51 ~~~~~vLdiG~G~G~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~~ 129 (194)
T 1dus_A 51 DKDDDILDLGCGYGVIGIALADE-VKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENVKDRKYNKIITNPPI 129 (194)
T ss_dssp CTTCEEEEETCTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTCTTSCEEEEEECCCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHcCCCccceEEEECchhcccccCCceEEEECCCc
Confidence 47789999999999999999987 56999999999999999999988776 4 99999999886555589999999999
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++. ......+++++.+.++
T Consensus 130 ~~~-~~~~~~~l~~~~~~L~ 148 (194)
T 1dus_A 130 RAG-KEVLHRIIEEGKELLK 148 (194)
T ss_dssp TTC-HHHHHHHHHHHHHHEE
T ss_pred ccc-hhHHHHHHHHHHHHcC
Confidence 852 1223356666665554
No 36
>2okc_A Type I restriction enzyme stysji M protein; NP_813429.1, N-6 DNA methylase, type I restriction enzyme ST protein; HET: SAM; 2.20A {Bacteroides thetaiotaomicron vpi-5482} SCOP: c.66.1.45
Probab=99.56 E-value=1.9e-14 Score=122.51 Aligned_cols=119 Identities=25% Similarity=0.263 Sum_probs=93.1
Q ss_pred cccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc--------------CCCeEEEEeCChHHHHH
Q 028214 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------------GADQVIAIDIDSDSLEL 86 (212)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~--------------~~~~v~~~D~~~~~~~~ 86 (212)
....+|.||..+...++..+. ..++.+|+|+|||+|.+++.+++. ...+++|+|+++.+++.
T Consensus 148 ~~~G~fyTP~~v~~~mv~~l~----~~~~~~VlDpacGsG~fl~~~~~~l~~~~~~~~~~~~~~~~~i~G~Ei~~~~~~l 223 (445)
T 2okc_A 148 SGAGQYFTPRPLIQAMVDCIN----PQMGETVCDPACGTGGFLLTAYDYMKGQSASKEKRDFLRDKALHGVDNTPLVVTL 223 (445)
T ss_dssp TCCGGGCCCHHHHHHHHHHHC----CCTTCCEEETTCTTCHHHHHHHHHHHTCC-CCHHHHHHHHTTEEEEESCHHHHHH
T ss_pred ccCCcccCcHHHHHHHHHHhC----CCCCCEEeccCCCcchHHHHHHHHHHHhcCCHHHHHhhcCeEEEEEeCCHHHHHH
Confidence 345678899888777665442 346779999999999999988864 22479999999999999
Q ss_pred HHHHHhhcCC---ceEEEEcccccCcCCCcccEEEEcCCCCCCCCC---------------chHHHHHHHHhhcC
Q 028214 87 ASENAADLEL---DIDFVQCDIRNLEWRGHVDTVVMNPPFGTRKKG---------------VDMDFLSMALKVAS 143 (212)
Q Consensus 87 a~~~~~~~~~---~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~~~---------------~~~~~l~~~~~~~~ 143 (212)
|+.|+...+. ++++.++|....+...+||+|++||||...... ....++.++.+.++
T Consensus 224 A~~nl~l~g~~~~~~~i~~gD~l~~~~~~~fD~Iv~NPPf~~~~~~~~~~~~~~~~~~~~~~~~~fl~~~~~~Lk 298 (445)
T 2okc_A 224 ASMNLYLHGIGTDRSPIVCEDSLEKEPSTLVDVILANPPFGTRPAGSVDINRPDFYVETKNNQLNFLQHMMLMLK 298 (445)
T ss_dssp HHHHHHHTTCCSSCCSEEECCTTTSCCSSCEEEEEECCCSSCCCTTCCCCCCTTSSSCCSCHHHHHHHHHHHHEE
T ss_pred HHHHHHHhCCCcCCCCEeeCCCCCCcccCCcCEEEECCCCCCcccccchhhHhhcCCCCcchHHHHHHHHHHHhc
Confidence 9999988776 678999999887665589999999999875221 12477887776654
No 37
>3gru_A Dimethyladenosine transferase; rossman fold, ribosomal assem adenosyl-L-methionine, rRNA, methyltransferase, RNA-binding processing; HET: AMP; 1.60A {Methanocaldococcus jannaschii} PDB: 3grr_A* 3grv_A* 3gry_A* 3fyd_A 3fyc_A*
Probab=99.55 E-value=1.5e-14 Score=116.56 Aligned_cols=101 Identities=23% Similarity=0.326 Sum_probs=80.1
Q ss_pred ccccccc-CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCc
Q 028214 19 PKVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELD 97 (212)
Q Consensus 19 ~~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~ 97 (212)
+...+.| |.+.+.+...++..+. ..++++|||+|||+|.++..+++. ..+|+++|+|+.+++.+++++...+ +
T Consensus 24 ~~k~~GQnfL~d~~i~~~Iv~~l~----~~~~~~VLEIG~G~G~lT~~La~~-~~~V~aVEid~~li~~a~~~~~~~~-~ 97 (295)
T 3gru_A 24 PKKKLGQCFLIDKNFVNKAVESAN----LTKDDVVLEIGLGKGILTEELAKN-AKKVYVIEIDKSLEPYANKLKELYN-N 97 (295)
T ss_dssp ------CCEECCHHHHHHHHHHTT----CCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCGGGHHHHHHHHHHCS-S
T ss_pred CccccCccccCCHHHHHHHHHhcC----CCCcCEEEEECCCchHHHHHHHhc-CCEEEEEECCHHHHHHHHHHhccCC-C
Confidence 3445555 7777777777665543 347889999999999999999987 4599999999999999999987433 7
Q ss_pred eEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 98 IDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 98 v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
++++++|+.+++.+. .||.|++|+||+.
T Consensus 98 v~vi~gD~l~~~~~~~~fD~Iv~NlPy~i 126 (295)
T 3gru_A 98 IEIIWGDALKVDLNKLDFNKVVANLPYQI 126 (295)
T ss_dssp EEEEESCTTTSCGGGSCCSEEEEECCGGG
T ss_pred eEEEECchhhCCcccCCccEEEEeCcccc
Confidence 999999999887655 7999999999975
No 38
>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}
Probab=99.55 E-value=5.1e-13 Score=102.11 Aligned_cols=91 Identities=15% Similarity=0.141 Sum_probs=73.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC-CcccEEEEcC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNP 121 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~~D~i~~np 121 (212)
...++.+|||+|||+|.+++.+++. ..+|+|+|+++.+++.|+++++.++. +++++++|+.+.... ..||+|++++
T Consensus 52 ~~~~~~~vLDlGcG~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~D~v~~~~ 130 (204)
T 3njr_A 52 APRRGELLWDIGGGSGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALADLPLPEAVFIGG 130 (204)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTTSCCCSEEEECS
T ss_pred CCCCCCEEEEecCCCCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhcccCCCCCEEEECC
Confidence 3347889999999999999999988 56999999999999999999998876 699999999884433 3899999987
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
.. ... +++++.+.++
T Consensus 131 ~~------~~~-~l~~~~~~Lk 145 (204)
T 3njr_A 131 GG------SQA-LYDRLWEWLA 145 (204)
T ss_dssp CC------CHH-HHHHHHHHSC
T ss_pred cc------cHH-HHHHHHHhcC
Confidence 53 122 6666665544
No 39
>4hc4_A Protein arginine N-methyltransferase 6; HRMT1L6, S-adenosyl-L-homocysteine, struc genomics, structural genomics consortium, SGC; HET: SAH; 1.97A {Homo sapiens}
Probab=99.55 E-value=2.7e-14 Score=118.52 Aligned_cols=79 Identities=23% Similarity=0.232 Sum_probs=70.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
.++++|||+|||+|.+++.+++.|+.+|+|+|.++ +++.|+++++.++. +|+++++|+.++..+.+||+|++.+.-.
T Consensus 82 ~~~k~VLDvG~GtGiLs~~Aa~aGA~~V~ave~s~-~~~~a~~~~~~n~~~~~i~~i~~~~~~~~lpe~~DvivsE~~~~ 160 (376)
T 4hc4_A 82 LRGKTVLDVGAGTGILSIFCAQAGARRVYAVEASA-IWQQAREVVRFNGLEDRVHVLPGPVETVELPEQVDAIVSEWMGY 160 (376)
T ss_dssp HTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-THHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCCBT
T ss_pred cCCCEEEEeCCCccHHHHHHHHhCCCEEEEEeChH-HHHHHHHHHHHcCCCceEEEEeeeeeeecCCccccEEEeecccc
Confidence 47899999999999999999999988999999996 88999999999987 7999999999988778999999987643
Q ss_pred CC
Q 028214 125 TR 126 (212)
Q Consensus 125 ~~ 126 (212)
..
T Consensus 161 ~l 162 (376)
T 4hc4_A 161 GL 162 (376)
T ss_dssp TB
T ss_pred cc
Confidence 33
No 40
>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*
Probab=99.55 E-value=9.1e-14 Score=110.27 Aligned_cols=96 Identities=19% Similarity=0.242 Sum_probs=79.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC---CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG---ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNP 121 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~---~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~np 121 (212)
.++.+|||+|||+|..++.+++.. ..+|+|+|+|+.|++.|++++...+. +++++++|+.+++.+ .||+|+++-
T Consensus 69 ~~~~~vLDlGcGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~D~~~~~~~-~~d~v~~~~ 147 (261)
T 4gek_A 69 QPGTQVYDLGCSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEGDIRDIAIE-NASMVVLNF 147 (261)
T ss_dssp CTTCEEEEETCTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCTTTCCCC-SEEEEEEES
T ss_pred CCCCEEEEEeCCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeeccccccccc-ccccceeee
Confidence 478899999999999999999752 34899999999999999999987765 799999999998765 799999998
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+++.........++++.+.++
T Consensus 148 ~l~~~~~~~~~~~l~~i~~~Lk 169 (261)
T 4gek_A 148 TLQFLEPSERQALLDKIYQGLN 169 (261)
T ss_dssp CGGGSCHHHHHHHHHHHHHHEE
T ss_pred eeeecCchhHhHHHHHHHHHcC
Confidence 8877644444456777777765
No 41
>2igt_A SAM dependent methyltransferase; alpha-beta sandwich, beta-barrel, structural genomics, PSI-2 structure initiative; HET: MSE SAM GOL; 1.89A {Agrobacterium tumefaciens str} SCOP: c.66.1.51
Probab=99.55 E-value=1.8e-13 Score=112.17 Aligned_cols=124 Identities=18% Similarity=0.142 Sum_probs=88.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcC-----CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW-----RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~-----~~~~D~i~~ 119 (212)
++.+|||+|||+|.+++.+++.+. +|+++|+|+.+++.|++|++.++. +++++++|+.++.. ..+||+|++
T Consensus 153 ~~~~VLDlgcGtG~~sl~la~~ga-~V~~VD~s~~al~~a~~n~~~~gl~~~~v~~i~~D~~~~l~~~~~~~~~fD~Ii~ 231 (332)
T 2igt_A 153 RPLKVLNLFGYTGVASLVAAAAGA-EVTHVDASKKAIGWAKENQVLAGLEQAPIRWICEDAMKFIQREERRGSTYDIILT 231 (332)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHHHHTCTTSCEEEECSCHHHHHHHHHHHTCCBSEEEE
T ss_pred CCCcEEEcccccCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHcCCCccceEEEECcHHHHHHHHHhcCCCceEEEE
Confidence 567999999999999999998877 999999999999999999998886 39999999988653 348999999
Q ss_pred cCCCCCCC-CC-------chHHHHHHHHhhcC-c-eEEEEecCc---hHHHHHHHHHhhcCCccee
Q 028214 120 NPPFGTRK-KG-------VDMDFLSMALKVAS-Q-AVYSLHKTS---TREHVKKAALRDFNASSAE 172 (212)
Q Consensus 120 nppy~~~~-~~-------~~~~~l~~~~~~~~-~-~~~~~~~~~---~~~~~~~~~~r~l~~~~~~ 172 (212)
|||+.... .. ....+++.+.+.++ + .+++.+... ....+.....+.+...+..
T Consensus 232 dPP~~~~~~~~~~~~~~~~~~~ll~~~~~~LkpgG~lli~~~~~~~~~~~~~~~~l~~a~~~~g~~ 297 (332)
T 2igt_A 232 DPPKFGRGTHGEVWQLFDHLPLMLDICREILSPKALGLVLTAYSIRASFYSMHELMRETMRGAGGV 297 (332)
T ss_dssp CCCSEEECTTCCEEEHHHHHHHHHHHHHHTBCTTCCEEEEEECCTTSCHHHHHHHHHHHTTTSCSE
T ss_pred CCccccCCchHHHHHHHHHHHHHHHHHHHhcCcCcEEEEEECCCCCCCHHHHHHHHHHHHHHcCCe
Confidence 99974432 11 12356666666654 2 334333221 3444444444444423333
No 42
>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36
Probab=99.55 E-value=2.7e-14 Score=109.06 Aligned_cols=98 Identities=13% Similarity=0.076 Sum_probs=79.1
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-------------cCCceEEEEcccccCcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD-------------LELDIDFVQCDIRNLEWR 111 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-------------~~~~v~~~~~d~~~~~~~ 111 (212)
...++.+|||+|||+|..+..+++.+. +|+|+|+|+.|++.|+++... ...+++++++|+.+++..
T Consensus 19 ~~~~~~~vLD~GCG~G~~~~~la~~g~-~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~ 97 (203)
T 1pjz_A 19 NVVPGARVLVPLCGKSQDMSWLSGQGY-HVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR 97 (203)
T ss_dssp CCCTTCEEEETTTCCSHHHHHHHHHCC-EEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred ccCCCCEEEEeCCCCcHhHHHHHHCCC-eEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence 334778999999999999999998866 899999999999999988653 123789999999998865
Q ss_pred --CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 112 --GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 112 --~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+||+|++...+++........+++++.+.++
T Consensus 98 ~~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~Lk 131 (203)
T 1pjz_A 98 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMP 131 (203)
T ss_dssp HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEEECcchhhCCHHHHHHHHHHHHHHcC
Confidence 38999999888877654334457777777765
No 43
>3g89_A Ribosomal RNA small subunit methyltransferase G; 16S rRNA methyltransferase, translation, cytoplasm, rRNA processing; HET: HIC SAM AMP; 1.50A {Thermus thermophilus} PDB: 3g88_A* 3g8a_A* 3g8b_A*
Probab=99.54 E-value=1.1e-13 Score=109.07 Aligned_cols=130 Identities=12% Similarity=0.094 Sum_probs=91.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC----CcccEEEEc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTVVMN 120 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----~~~D~i~~n 120 (212)
.++.+|||+|||+|..++.++.. +..+|+++|+++.+++.|++|++.++. +++++++|+.++... .+||+|+++
T Consensus 79 ~~~~~vLDiG~G~G~~~i~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~l~~v~~~~~d~~~~~~~~~~~~~fD~I~s~ 158 (249)
T 3g89_A 79 QGPLRVLDLGTGAGFPGLPLKIVRPELELVLVDATRKKVAFVERAIEVLGLKGARALWGRAEVLAREAGHREAYARAVAR 158 (249)
T ss_dssp CSSCEEEEETCTTTTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEECCHHHHTTSTTTTTCEEEEEEE
T ss_pred CCCCEEEEEcCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEECcHHHhhcccccCCCceEEEEC
Confidence 46789999999999999999965 566999999999999999999999887 799999999987652 489999996
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC-ceEEEEec-CchHHHHHHHHHhhcCCcceeEEEEEeecCCc
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS-QAVYSLHK-TSTREHVKKAALRDFNASSAEVLCELRYDVPQ 183 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~-~~~~~~~~-~~~~~~~~~~~~r~l~~~~~~~~~~~~~~~~~ 183 (212)
-. ......++.+.+..+ ++.+++.. ....+.+.... ..+...++.......+.+|.
T Consensus 159 a~------~~~~~ll~~~~~~LkpgG~l~~~~g~~~~~e~~~~~-~~l~~~G~~~~~~~~~~~p~ 216 (249)
T 3g89_A 159 AV------APLCVLSELLLPFLEVGGAAVAMKGPRVEEELAPLP-PALERLGGRLGEVLALQLPL 216 (249)
T ss_dssp SS------CCHHHHHHHHGGGEEEEEEEEEEECSCCHHHHTTHH-HHHHHHTEEEEEEEEEECTT
T ss_pred Cc------CCHHHHHHHHHHHcCCCeEEEEEeCCCcHHHHHHHH-HHHHHcCCeEEEEEEeeCCC
Confidence 43 123456666766654 34344333 22333333322 33332355555555566664
No 44
>3m70_A Tellurite resistance protein TEHB homolog; structural genomics, PSI-2, protein ST initiative; 1.95A {Haemophilus influenzae}
Probab=99.54 E-value=1.4e-13 Score=110.24 Aligned_cols=95 Identities=22% Similarity=0.259 Sum_probs=83.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~ 127 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|++++..++.+++++++|+.+.+...+||+|+++.++++..
T Consensus 120 ~~~~vLD~GcG~G~~~~~l~~~g~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~i~~~~~~~~~~ 198 (286)
T 3m70_A 120 SPCKVLDLGCGQGRNSLYLSLLGY-DVTSWDHNENSIAFLNETKEKENLNISTALYDINAANIQENYDFIVSTVVFMFLN 198 (286)
T ss_dssp CSCEEEEESCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCGGGCCCCSCEEEEEECSSGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHHcCCceEEEEeccccccccCCccEEEEccchhhCC
Confidence 788999999999999999998866 9999999999999999999988888999999999987755999999999999876
Q ss_pred CCchHHHHHHHHhhcC
Q 028214 128 KGVDMDFLSMALKVAS 143 (212)
Q Consensus 128 ~~~~~~~l~~~~~~~~ 143 (212)
......+++++.+.++
T Consensus 199 ~~~~~~~l~~~~~~Lk 214 (286)
T 3m70_A 199 RERVPSIIKNMKEHTN 214 (286)
T ss_dssp GGGHHHHHHHHHHTEE
T ss_pred HHHHHHHHHHHHHhcC
Confidence 6666677777776654
No 45
>3fut_A Dimethyladenosine transferase; methyltransferase, dimethyltransferase, dual-specific methyltransferase, 16S rRNA methyltransferase; 1.52A {Thermus thermophilus} PDB: 3fuu_A* 3fuv_A 3fuw_A* 3fux_A*
Probab=99.54 E-value=3.4e-14 Score=113.10 Aligned_cols=113 Identities=20% Similarity=0.226 Sum_probs=86.9
Q ss_pred HHHHHhccCCCCCCcccccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHH
Q 028214 5 QLESVLGDLEQFSNPKVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSL 84 (212)
Q Consensus 5 ~l~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~ 84 (212)
.+.++++... +.......+.|...+.+...++..+.. .++ +|||+|||+|.++..+++.+ .+|+++|+|+.++
T Consensus 9 ~~~~~~~~~~-~~~~k~~GQnfL~d~~i~~~Iv~~~~~----~~~-~VLEIG~G~G~lt~~L~~~~-~~V~avEid~~~~ 81 (271)
T 3fut_A 9 SVRALLERHG-LFADKRFGQNFLVSEAHLRRIVEAARP----FTG-PVFEVGPGLGALTRALLEAG-AEVTAIEKDLRLR 81 (271)
T ss_dssp HHHHHHHHTT-CCCSTTSSCCEECCHHHHHHHHHHHCC----CCS-CEEEECCTTSHHHHHHHHTT-CCEEEEESCGGGH
T ss_pred HHHHHHHhcC-CCccccCCccccCCHHHHHHHHHhcCC----CCC-eEEEEeCchHHHHHHHHHcC-CEEEEEECCHHHH
Confidence 3455554443 222233344477777888777765543 367 99999999999999999886 5899999999999
Q ss_pred HHHHHHHhhcCCceEEEEcccccCcCCC--cccEEEEcCCCCCC
Q 028214 85 ELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFGTR 126 (212)
Q Consensus 85 ~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~D~i~~nppy~~~ 126 (212)
+.+++++.. .+++++++|+.+++.+. .+|.|++|+||+..
T Consensus 82 ~~l~~~~~~--~~v~vi~~D~l~~~~~~~~~~~~iv~NlPy~is 123 (271)
T 3fut_A 82 PVLEETLSG--LPVRLVFQDALLYPWEEVPQGSLLVANLPYHIA 123 (271)
T ss_dssp HHHHHHTTT--SSEEEEESCGGGSCGGGSCTTEEEEEEECSSCC
T ss_pred HHHHHhcCC--CCEEEEECChhhCChhhccCccEEEecCccccc
Confidence 999999874 27999999999987653 79999999999863
No 46
>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0
Probab=99.53 E-value=1.1e-12 Score=99.77 Aligned_cols=107 Identities=14% Similarity=0.142 Sum_probs=83.3
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (212)
+...+...++... ...++.+|||+|||+|.+++.+++.+ ..+|+++|+|+.+++.|+++++.++. +++++++|+
T Consensus 24 ~~~~i~~~~l~~l----~~~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~ 99 (204)
T 3e05_A 24 TKQEVRAVTLSKL----RLQDDLVMWDIGAGSASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFA 99 (204)
T ss_dssp CCHHHHHHHHHHT----TCCTTCEEEEETCTTCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCT
T ss_pred ChHHHHHHHHHHc----CCCCCCEEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCCh
Confidence 4444444444332 34478899999999999999999875 46999999999999999999998876 799999999
Q ss_pred ccCcCC-CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 106 RNLEWR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 106 ~~~~~~-~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+.... .+||+|+++++++ ....+++++.+.++
T Consensus 100 ~~~~~~~~~~D~i~~~~~~~-----~~~~~l~~~~~~Lk 133 (204)
T 3e05_A 100 PEGLDDLPDPDRVFIGGSGG-----MLEEIIDAVDRRLK 133 (204)
T ss_dssp TTTCTTSCCCSEEEESCCTT-----CHHHHHHHHHHHCC
T ss_pred hhhhhcCCCCCEEEECCCCc-----CHHHHHHHHHHhcC
Confidence 766544 4899999998864 34466777766654
No 47
>3a27_A TYW2, uncharacterized protein MJ1557; wybutosine modification, transferase; HET: SAM; 2.00A {Methanocaldococcus jannaschii}
Probab=99.53 E-value=1.6e-13 Score=109.52 Aligned_cols=101 Identities=20% Similarity=0.227 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
.++++|||+|||+|.+++.+++. +..+|+|+|+++.+++.|++|++.++. ++.++++|+.+.+...+||+|++|||+.
T Consensus 118 ~~~~~VLDlgcG~G~~s~~la~~~~~~~V~~vD~s~~av~~a~~n~~~n~l~~~~~~~~d~~~~~~~~~~D~Vi~d~p~~ 197 (272)
T 3a27_A 118 NENEVVVDMFAGIGYFTIPLAKYSKPKLVYAIEKNPTAYHYLCENIKLNKLNNVIPILADNRDVELKDVADRVIMGYVHK 197 (272)
T ss_dssp CTTCEEEETTCTTTTTHHHHHHHTCCSEEEEEECCHHHHHHHHHHHHHTTCSSEEEEESCGGGCCCTTCEEEEEECCCSS
T ss_pred CCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEECChHHcCccCCceEEEECCccc
Confidence 46789999999999999999987 356999999999999999999999987 7899999999883333899999999972
Q ss_pred CCCCCchHHHHHHHHhhcC--ceEEEEecCc
Q 028214 125 TRKKGVDMDFLSMALKVAS--QAVYSLHKTS 153 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~--~~~~~~~~~~ 153 (212)
...++..+.+..+ +.+++++.+.
T Consensus 198 ------~~~~l~~~~~~LkpgG~l~~s~~~~ 222 (272)
T 3a27_A 198 ------THKFLDKTFEFLKDRGVIHYHETVA 222 (272)
T ss_dssp ------GGGGHHHHHHHEEEEEEEEEEEEEE
T ss_pred ------HHHHHHHHHHHcCCCCEEEEEEcCc
Confidence 1234454444432 3566666544
No 48
>2h00_A Methyltransferase 10 domain containing protein; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.54
Probab=99.53 E-value=1.2e-13 Score=108.78 Aligned_cols=80 Identities=20% Similarity=0.243 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccC---cCC----CcccEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL---EWR----GHVDTV 117 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~---~~~----~~~D~i 117 (212)
++.+|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|++|+..++. +++++++|+.+. ... .+||+|
T Consensus 65 ~~~~vLDlG~G~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~fD~i 144 (254)
T 2h00_A 65 TLRRGIDIGTGASCIYPLLGATLNGWYFLATEVDDMCFNYAKKNVEQNNLSDLIKVVKVPQKTLLMDALKEESEIIYDFC 144 (254)
T ss_dssp CCCEEEEESCTTTTHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTCSSTTTSTTCCSCCBSEE
T ss_pred CCCEEEEeCCChhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHcCCCccEEEEEcchhhhhhhhhhcccCCcccEE
Confidence 5679999999999999988865 346999999999999999999998876 499999997652 222 379999
Q ss_pred EEcCCCCCCC
Q 028214 118 VMNPPFGTRK 127 (212)
Q Consensus 118 ~~nppy~~~~ 127 (212)
++||||+...
T Consensus 145 ~~npp~~~~~ 154 (254)
T 2h00_A 145 MCNPPFFANQ 154 (254)
T ss_dssp EECCCCC---
T ss_pred EECCCCccCc
Confidence 9999998653
No 49
>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}
Probab=99.53 E-value=7.1e-14 Score=105.83 Aligned_cols=97 Identities=21% Similarity=0.307 Sum_probs=77.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC--CCcccEEEEc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--RGHVDTVVMN 120 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~~~~D~i~~n 120 (212)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++++.++. +++++++|+.++.. ..+||+|++|
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~ 100 (197)
T 3eey_A 21 KEGDTVVDATCGNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVMFN 100 (197)
T ss_dssp CTTCEEEESCCTTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEEEE
T ss_pred CCCCEEEEcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEEEc
Confidence 36789999999999999999976 346999999999999999999998876 79999999988752 2389999999
Q ss_pred CCCCCCCC-------CchHHHHHHHHhhcC
Q 028214 121 PPFGTRKK-------GVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~-------~~~~~~l~~~~~~~~ 143 (212)
+||..... .....+++++.+.++
T Consensus 101 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 130 (197)
T 3eey_A 101 LGYLPSGDHSISTRPETTIQALSKAMELLV 130 (197)
T ss_dssp ESBCTTSCTTCBCCHHHHHHHHHHHHHHEE
T ss_pred CCcccCcccccccCcccHHHHHHHHHHhCc
Confidence 99943211 122356777776654
No 50
>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*
Probab=99.52 E-value=2.1e-13 Score=108.12 Aligned_cols=94 Identities=19% Similarity=0.188 Sum_probs=81.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
.++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|++++...+. +++++++|+.+++... +||+|+++.++
T Consensus 45 ~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i~~~~~~ 124 (267)
T 3kkz_A 45 TEKSLIADIGCGTGGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEELDLIWSEGAI 124 (267)
T ss_dssp CTTCEEEEETCTTCHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEESSCG
T ss_pred CCCCEEEEeCCCCCHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCEEEEEEcCCc
Confidence 46789999999999999999987666999999999999999999988876 5999999999987554 89999999999
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++. ....+++++.+.++
T Consensus 125 ~~~---~~~~~l~~~~~~Lk 141 (267)
T 3kkz_A 125 YNI---GFERGLNEWRKYLK 141 (267)
T ss_dssp GGT---CHHHHHHHHGGGEE
T ss_pred eec---CHHHHHHHHHHHcC
Confidence 876 24567777777665
No 51
>2yxd_A Probable cobalt-precorrin-6Y C(15)-methyltransfer [decarboxylating]; alpha and beta protein (A/B) class; HET: MES; 2.30A {Methanocaldococcus jannaschii}
Probab=99.52 E-value=6.1e-13 Score=98.93 Aligned_cols=104 Identities=16% Similarity=0.206 Sum_probs=81.1
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc
Q 028214 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI 105 (212)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~ 105 (212)
++.+.+...++... ...++.+|||+|||+|.++..+++ +..+++++|+++.+++.+++++..++. +++++++|+
T Consensus 18 ~~~~~~~~~~~~~~----~~~~~~~vLdiG~G~G~~~~~l~~-~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~ 92 (183)
T 2yxd_A 18 ITKEEIRAVSIGKL----NLNKDDVVVDVGCGSGGMTVEIAK-RCKFVYAIDYLDGAIEVTKQNLAKFNIKNCQIIKGRA 92 (183)
T ss_dssp CCCHHHHHHHHHHH----CCCTTCEEEEESCCCSHHHHHHHT-TSSEEEEEECSHHHHHHHHHHHHHTTCCSEEEEESCH
T ss_pred cCHHHHHHHHHHHc----CCCCCCEEEEeCCCCCHHHHHHHh-cCCeEEEEeCCHHHHHHHHHHHHHcCCCcEEEEECCc
Confidence 44445554444333 334778999999999999999998 566999999999999999999998876 799999999
Q ss_pred ccCcCCCcccEEEEcCCCCCCCCCchHHHHHHHHhh
Q 028214 106 RNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKV 141 (212)
Q Consensus 106 ~~~~~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~ 141 (212)
.+.....+||+|+++++ .....+++.+.+.
T Consensus 93 ~~~~~~~~~D~i~~~~~------~~~~~~l~~~~~~ 122 (183)
T 2yxd_A 93 EDVLDKLEFNKAFIGGT------KNIEKIIEILDKK 122 (183)
T ss_dssp HHHGGGCCCSEEEECSC------SCHHHHHHHHHHT
T ss_pred cccccCCCCcEEEECCc------ccHHHHHHHHhhC
Confidence 88433348999999998 2345666666665
No 52
>2ih2_A Modification methylase TAQI; DNA, DNA methyltransferase, target base partner, 5-methylpyr 2(1H)-ONE, base flipping; HET: 5PY 6MA NEA; 1.61A {Thermus aquaticus} SCOP: c.66.1.27 d.287.1.1 PDB: 2ibs_A* 2ibt_A* 2ih4_A* 2ih5_A* 2jg3_A* 2np6_A* 2np7_A* 1aqj_A* 1aqi_A* 2adm_A* 1g38_A*
Probab=99.51 E-value=6.9e-14 Score=117.86 Aligned_cols=96 Identities=23% Similarity=0.266 Sum_probs=74.6
Q ss_pred ccccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCc
Q 028214 20 KVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELD 97 (212)
Q Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~ 97 (212)
.....+|.|++.++..++..+. ..++.+|||+|||+|.+++.++++ ...+++|+|+++.+++.| .+
T Consensus 15 ~~~~g~~~TP~~l~~~~~~~~~----~~~~~~vLD~gcGtG~~~~~~~~~~~~~~~i~gvDi~~~~~~~a--------~~ 82 (421)
T 2ih2_A 15 PRSLGRVETPPEVVDFMVSLAE----APRGGRVLEPACAHGPFLRAFREAHGTAYRFVGVEIDPKALDLP--------PW 82 (421)
T ss_dssp ------CCCCHHHHHHHHHHCC----CCTTCEEEEETCTTCHHHHHHHHHHCSCSEEEEEESCTTTCCCC--------TT
T ss_pred cccCceEeCCHHHHHHHHHhhc----cCCCCEEEECCCCChHHHHHHHHHhCCCCeEEEEECCHHHHHhC--------CC
Confidence 4557889999888877775543 235679999999999999999975 356999999999999877 26
Q ss_pred eEEEEcccccCcCCCcccEEEEcCCCCCCC
Q 028214 98 IDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (212)
Q Consensus 98 v~~~~~d~~~~~~~~~~D~i~~nppy~~~~ 127 (212)
++++++|+.+.....+||+|++||||....
T Consensus 83 ~~~~~~D~~~~~~~~~fD~Ii~NPPy~~~~ 112 (421)
T 2ih2_A 83 AEGILADFLLWEPGEAFDLILGNPPYGIVG 112 (421)
T ss_dssp EEEEESCGGGCCCSSCEEEEEECCCCCCBS
T ss_pred CcEEeCChhhcCccCCCCEEEECcCccCcc
Confidence 899999999887656899999999997653
No 53
>2xvm_A Tellurite resistance protein TEHB; antibiotic resistance, transferase; HET: SAH; 1.48A {Escherichia coli} PDB: 2xva_A* 4dq0_A* 2i6g_A*
Probab=99.51 E-value=4.1e-13 Score=101.37 Aligned_cols=96 Identities=17% Similarity=0.155 Sum_probs=82.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.++..++..+. +++++|+++.+++.+++++...+. +++++++|+.+.+...+||+|+++.++++
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~ 109 (199)
T 2xvm_A 31 VKPGKTLDLGCGNGRNSLYLAANGY-DVDAWDKNAMSIANVERIKSIENLDNLHTRVVDLNNLTFDRQYDFILSTVVLMF 109 (199)
T ss_dssp SCSCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCTTEEEEECCGGGCCCCCCEEEEEEESCGGG
T ss_pred cCCCeEEEEcCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhCCCCCcEEEEcchhhCCCCCCceEEEEcchhhh
Confidence 4678999999999999999998754 999999999999999999988776 79999999998876458999999999988
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
........+++++.+.++
T Consensus 110 ~~~~~~~~~l~~~~~~L~ 127 (199)
T 2xvm_A 110 LEAKTIPGLIANMQRCTK 127 (199)
T ss_dssp SCGGGHHHHHHHHHHTEE
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 765555677777777664
No 54
>2y1w_A Histone-arginine methyltransferase CARM1; histone modification; HET: SFG 849; 2.10A {Homo sapiens} PDB: 2y1x_A* 3b3f_A* 3b3g_A 2v74_B* 2v7e_A
Probab=99.51 E-value=5.4e-14 Score=116.03 Aligned_cols=97 Identities=22% Similarity=0.264 Sum_probs=80.7
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCC
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy 123 (212)
..++++|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++.++. +++++++|+.+++.+.+||+|++++++
T Consensus 48 ~~~~~~VLDiGcGtG~ls~~la~~g~~~V~~vD~s~-~~~~a~~~~~~~~l~~~v~~~~~d~~~~~~~~~~D~Ivs~~~~ 126 (348)
T 2y1w_A 48 DFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPMG 126 (348)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEEECCCB
T ss_pred cCCcCEEEEcCCCccHHHHHHHhCCCCEEEEECCHH-HHHHHHHHHHHcCCCCcEEEEEcchhhCCCCCceeEEEEeCch
Confidence 347889999999999999999988777999999996 88999999988876 799999999988766689999999998
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++.........+..+.+.++
T Consensus 127 ~~~~~~~~~~~l~~~~~~Lk 146 (348)
T 2y1w_A 127 YMLFNERMLESYLHAKKYLK 146 (348)
T ss_dssp TTBTTTSHHHHHHHGGGGEE
T ss_pred hcCChHHHHHHHHHHHhhcC
Confidence 76655555566666665554
No 55
>1yzh_A TRNA (guanine-N(7)-)-methyltransferase; alpha-beta-alpha sandwich, S-adenosylmeth dependent, structural genomics, PSI; 2.02A {Streptococcus pneumoniae} SCOP: c.66.1.53
Probab=99.51 E-value=4.9e-13 Score=102.68 Aligned_cols=96 Identities=20% Similarity=0.288 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCc--CC-CcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--WR-GHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~--~~-~~~D~i~~npp 122 (212)
++.+|||+|||+|.+++.+++.. ..+++|+|+++.+++.|++++..++. +++++++|+.+++ .. .+||+|++|+|
T Consensus 41 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~D~i~~~~~ 120 (214)
T 1yzh_A 41 DNPIHVEVGSGKGAFVSGMAKQNPDINYIGIDIQKSVLSYALDKVLEVGVPNIKLLWVDGSDLTDYFEDGEIDRLYLNFS 120 (214)
T ss_dssp CCCEEEEESCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCSSEEEEECCSSCGGGTSCTTCCSEEEEESC
T ss_pred CCCeEEEEccCcCHHHHHHHHHCCCCCEEEEEcCHHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCCCCCCEEEEECC
Confidence 57799999999999999999763 46999999999999999999988876 8999999999865 33 38999999988
Q ss_pred CCCCC------CCchHHHHHHHHhhcC
Q 028214 123 FGTRK------KGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~------~~~~~~~l~~~~~~~~ 143 (212)
-.+.. ......+++.+.+.++
T Consensus 121 ~~~~~~~~~~~~~~~~~~l~~~~~~Lk 147 (214)
T 1yzh_A 121 DPWPKKRHEKRRLTYKTFLDTFKRILP 147 (214)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHSC
T ss_pred CCccccchhhhccCCHHHHHHHHHHcC
Confidence 64321 1123467777776654
No 56
>3ofk_A Nodulation protein S; NODS, N-methyltransferase, SAH, SAM, NOD factor, fixation, symbiosis, alpha/beta structure; HET: SAH; 1.85A {Bradyrhizobium SP} PDB: 3ofj_A*
Probab=99.51 E-value=3.2e-13 Score=103.56 Aligned_cols=97 Identities=12% Similarity=0.147 Sum_probs=81.1
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++....+ +++++++|+.+.+...+||+|+++..++
T Consensus 48 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 125 (216)
T 3ofk_A 48 SSGAVSNGLEIGCAAGAFTEKLAPHCK-RLTVIDVMPRAIGRACQRTKRWS-HISWAATDILQFSTAELFDLIVVAEVLY 125 (216)
T ss_dssp TTSSEEEEEEECCTTSHHHHHHGGGEE-EEEEEESCHHHHHHHHHHTTTCS-SEEEEECCTTTCCCSCCEEEEEEESCGG
T ss_pred ccCCCCcEEEEcCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhcccCC-CeEEEEcchhhCCCCCCccEEEEccHHH
Confidence 445678999999999999999998754 89999999999999999987755 8999999999988555999999999998
Q ss_pred CCCC-CchHHHHHHHHhhcC
Q 028214 125 TRKK-GVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~-~~~~~~l~~~~~~~~ 143 (212)
+... .....+++++.+.++
T Consensus 126 ~~~~~~~~~~~l~~~~~~L~ 145 (216)
T 3ofk_A 126 YLEDMTQMRTAIDNMVKMLA 145 (216)
T ss_dssp GSSSHHHHHHHHHHHHHTEE
T ss_pred hCCCHHHHHHHHHHHHHHcC
Confidence 8754 233466777777665
No 57
>3jwg_A HEN1, methyltransferase type 12; 1.90A {Clostridium thermocellum} PDB: 3jwi_A
Probab=99.51 E-value=1.7e-13 Score=105.35 Aligned_cols=97 Identities=21% Similarity=0.220 Sum_probs=79.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccCcCCC-cccEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWRG-HVDTVV 118 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~-~~D~i~ 118 (212)
.++.+|||+|||+|.++..+++.+. .+|+|+|+|+.+++.|++++...+. +++++++|+...+... +||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~ 107 (219)
T 3jwg_A 28 VNAKKVIDLGCGEGNLLSLLLKDKSFEQITGVDVSYSVLERAKDRLKIDRLPEMQRKRISLFQSSLVYRDKRFSGYDAAT 107 (219)
T ss_dssp TTCCEEEEETCTTCHHHHHHHTSTTCCEEEEEESCHHHHHHHHHHHTGGGSCHHHHTTEEEEECCSSSCCGGGTTCSEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHhhccccccCcceEEEeCcccccccccCCCCEEE
Confidence 3678999999999999999998653 6999999999999999999876554 6999999997766533 899999
Q ss_pred EcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
++..+++........+++++.+.++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk 132 (219)
T 3jwg_A 108 VIEVIEHLDENRLQAFEKVLFEFTR 132 (219)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC
T ss_pred EHHHHHhCCHHHHHHHHHHHHHhhC
Confidence 9999887744444567777777765
No 58
>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}
Probab=99.51 E-value=1.9e-13 Score=104.13 Aligned_cols=91 Identities=33% Similarity=0.350 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.+++.+++.+..+|+++|+++.+++.|++++..++. ++++.++|+.+... .+||+|++++++++
T Consensus 59 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~fD~i~~~~~~~~ 137 (205)
T 3grz_A 59 VKPLTVADVGTGSGILAIAAHKLGAKSVLATDISDESMTAAEENAALNGIYDIALQKTSLLADVD-GKFDLIVANILAEI 137 (205)
T ss_dssp SSCCEEEEETCTTSHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEESSTTTTCC-SCEEEEEEESCHHH
T ss_pred cCCCEEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEeccccccCC-CCceEEEECCcHHH
Confidence 36789999999999999999987777999999999999999999998877 49999999988653 48999999998653
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
...+++++.+.++
T Consensus 138 -----~~~~l~~~~~~L~ 150 (205)
T 3grz_A 138 -----LLDLIPQLDSHLN 150 (205)
T ss_dssp -----HHHHGGGSGGGEE
T ss_pred -----HHHHHHHHHHhcC
Confidence 2344555555544
No 59
>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}
Probab=99.50 E-value=4e-13 Score=112.37 Aligned_cols=95 Identities=22% Similarity=0.293 Sum_probs=75.2
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC--CCcccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RGHVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~nppy~~ 125 (212)
++++|||+|||+|.+++.++..+. .|+++|+|+.+++.|++|++.++...++.++|+.++.. ...||+|++|||+..
T Consensus 214 ~g~~VLDlg~GtG~~sl~~a~~ga-~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~f~ 292 (393)
T 4dmg_A 214 PGERVLDVYSYVGGFALRAARKGA-YALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPTLV 292 (393)
T ss_dssp TTCEEEEESCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCCCC
T ss_pred CCCeEEEcccchhHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCcCC
Confidence 488999999999999999999876 49999999999999999999998765678999988642 225999999999865
Q ss_pred CCCCch-------HHHHHHHHhhcC
Q 028214 126 RKKGVD-------MDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~-------~~~l~~~~~~~~ 143 (212)
...... ..++..+.+.++
T Consensus 293 ~~~~~~~~~~~~~~~ll~~a~~~Lk 317 (393)
T 4dmg_A 293 KRPEELPAMKRHLVDLVREALRLLA 317 (393)
T ss_dssp SSGGGHHHHHHHHHHHHHHHHHTEE
T ss_pred CCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 432221 245555555554
No 60
>3jwh_A HEN1; methyltransferase; HET: SAH; 2.20A {Anabaena variabilis} PDB: 3jwj_A
Probab=99.50 E-value=2.3e-13 Score=104.57 Aligned_cols=97 Identities=22% Similarity=0.255 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccCcCCC-cccEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWRG-HVDTVV 118 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~-~~D~i~ 118 (212)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.|++++...+. +++++++|+...+... +||+|+
T Consensus 28 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~ 107 (217)
T 3jwh_A 28 SNARRVIDLGCGQGNLLKILLKDSFFEQITGVDVSYRSLEIAQERLDRLRLPRNQWERLQLIQGALTYQDKRFHGYDAAT 107 (217)
T ss_dssp TTCCEEEEETCTTCHHHHHHHHCTTCSEEEEEESCHHHHHHHHHHHTTCCCCHHHHTTEEEEECCTTSCCGGGCSCSEEE
T ss_pred cCCCEEEEeCCCCCHHHHHHHhhCCCCEEEEEECCHHHHHHHHHHHHHhcCCcccCcceEEEeCCcccccccCCCcCEEe
Confidence 367899999999999999999874 36999999999999999999876654 5999999997665443 899999
Q ss_pred EcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
++..+++........+++++.+.++
T Consensus 108 ~~~~l~~~~~~~~~~~l~~~~~~Lk 132 (217)
T 3jwh_A 108 VIEVIEHLDLSRLGAFERVLFEFAQ 132 (217)
T ss_dssp EESCGGGCCHHHHHHHHHHHHTTTC
T ss_pred eHHHHHcCCHHHHHHHHHHHHHHcC
Confidence 9999988754444677888887765
No 61
>2h1r_A Dimethyladenosine transferase, putative; SGC toronto dimethyladenosine transferase, structural genomics, structural genomics consortium; 1.89A {Plasmodium falciparum}
Probab=99.50 E-value=6.1e-14 Score=113.40 Aligned_cols=95 Identities=24% Similarity=0.400 Sum_probs=75.1
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCD 104 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d 104 (212)
|...+.+...++..+ ...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.+++++...+. +++++++|
T Consensus 24 fl~~~~i~~~i~~~~----~~~~~~~VLDiG~G~G~lt~~La~~~-~~v~~vDi~~~~~~~a~~~~~~~~~~~v~~~~~D 98 (299)
T 2h1r_A 24 LLKNPGILDKIIYAA----KIKSSDIVLEIGCGTGNLTVKLLPLA-KKVITIDIDSRMISEVKKRCLYEGYNNLEVYEGD 98 (299)
T ss_dssp EECCHHHHHHHHHHH----CCCTTCEEEEECCTTSTTHHHHTTTS-SEEEEECSCHHHHHHHHHHHHHTTCCCEEC----
T ss_pred eecCHHHHHHHHHhc----CCCCcCEEEEEcCcCcHHHHHHHhcC-CEEEEEECCHHHHHHHHHHHHHcCCCceEEEECc
Confidence 555666766666543 33477899999999999999999874 5999999999999999999877665 79999999
Q ss_pred cccCcCCCcccEEEEcCCCCCC
Q 028214 105 IRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 105 ~~~~~~~~~~D~i~~nppy~~~ 126 (212)
+.+.+.. +||+|++||||+..
T Consensus 99 ~~~~~~~-~~D~Vv~n~py~~~ 119 (299)
T 2h1r_A 99 AIKTVFP-KFDVCTANIPYKIS 119 (299)
T ss_dssp CCSSCCC-CCSEEEEECCGGGH
T ss_pred hhhCCcc-cCCEEEEcCCcccc
Confidence 9988654 89999999999853
No 62
>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21
Probab=99.50 E-value=5.4e-13 Score=104.86 Aligned_cols=97 Identities=13% Similarity=0.040 Sum_probs=80.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
...++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++...+. ++++.++|+.+.+...+||+|++...
T Consensus 33 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~V~~~~~ 112 (256)
T 1nkv_A 33 RMKPGTRILDLGSGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVANEKCDVAACVGA 112 (256)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCCSSCEEEEEEESC
T ss_pred CCCCCCEEEEECCCCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCcCCCCCEEEECCC
Confidence 4457889999999999999999976445899999999999999999988775 69999999999877448999999887
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++.. .....++++.+.++
T Consensus 113 ~~~~~--~~~~~l~~~~r~Lk 131 (256)
T 1nkv_A 113 TWIAG--GFAGAEELLAQSLK 131 (256)
T ss_dssp GGGTS--SSHHHHHHHTTSEE
T ss_pred hHhcC--CHHHHHHHHHHHcC
Confidence 76653 23566777776655
No 63
>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*
Probab=99.49 E-value=9.8e-13 Score=103.40 Aligned_cols=94 Identities=19% Similarity=0.194 Sum_probs=80.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
.++.+|||+|||+|..+..+++.+..+|+|+|+++.+++.+++++...+. +++++++|+.+++... +||+|+++..+
T Consensus 45 ~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 124 (257)
T 3f4k_A 45 TDDAKIADIGCGTGGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELDLIWSEGAI 124 (257)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEEEEEEESCS
T ss_pred CCCCeEEEeCCCCCHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEEEEEecChH
Confidence 46779999999999999999987655999999999999999999998876 4999999999887654 89999999998
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++. .....++++.+.++
T Consensus 125 ~~~---~~~~~l~~~~~~L~ 141 (257)
T 3f4k_A 125 YNI---GFERGMNEWSKYLK 141 (257)
T ss_dssp CCC---CHHHHHHHHHTTEE
T ss_pred hhc---CHHHHHHHHHHHcC
Confidence 876 24567777776655
No 64
>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}
Probab=99.49 E-value=1.6e-12 Score=103.13 Aligned_cols=111 Identities=19% Similarity=0.198 Sum_probs=89.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccC
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (212)
.....++..+...+...++.+|||+|||+|.++..+++....+|+|+|+++.+++.+++++...+. +++++++|+.++
T Consensus 44 ~~~~~~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~ 123 (273)
T 3bus_A 44 DATDRLTDEMIALLDVRSGDRVLDVGCGIGKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDL 123 (273)
T ss_dssp HHHHHHHHHHHHHSCCCTTCEEEEESCTTSHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSC
T ss_pred HHHHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccC
Confidence 344455556666656667889999999999999999975456999999999999999999988775 699999999998
Q ss_pred cCCC-cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 109 EWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 109 ~~~~-~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+.+. +||+|+++.++++... ...+++++.+.++
T Consensus 124 ~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~ 157 (273)
T 3bus_A 124 PFEDASFDAVWALESLHHMPD--RGRALREMARVLR 157 (273)
T ss_dssp CSCTTCEEEEEEESCTTTSSC--HHHHHHHHHTTEE
T ss_pred CCCCCCccEEEEechhhhCCC--HHHHHHHHHHHcC
Confidence 7655 8999999999887633 3567777776654
No 65
>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*
Probab=99.49 E-value=2.2e-13 Score=107.58 Aligned_cols=111 Identities=24% Similarity=0.257 Sum_probs=81.3
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~ 105 (212)
|.++..-...+........ ..++.+|||+|||+|.+++.+++.+. +|+|+|+|+.+++.|++|+..++..+++.++|+
T Consensus 99 fgtg~~~tt~~~~~~l~~~-~~~~~~VLDiGcG~G~l~~~la~~g~-~v~gvDi~~~~v~~a~~n~~~~~~~v~~~~~d~ 176 (254)
T 2nxc_A 99 FGTGHHETTRLALKALARH-LRPGDKVLDLGTGSGVLAIAAEKLGG-KALGVDIDPMVLPQAEANAKRNGVRPRFLEGSL 176 (254)
T ss_dssp ---CCSHHHHHHHHHHHHH-CCTTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCGGGHHHHHHHHHHTTCCCEEEESCH
T ss_pred ccCCCCHHHHHHHHHHHHh-cCCCCEEEEecCCCcHHHHHHHHhCC-eEEEEECCHHHHHHHHHHHHHcCCcEEEEECCh
Confidence 4444444444444444432 34678999999999999999998877 999999999999999999998876689999998
Q ss_pred ccCcCCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 106 RNLEWRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 106 ~~~~~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+.....+||+|++|++++. ....+..+.+..+
T Consensus 177 ~~~~~~~~fD~Vv~n~~~~~-----~~~~l~~~~~~Lk 209 (254)
T 2nxc_A 177 EAALPFGPFDLLVANLYAEL-----HAALAPRYREALV 209 (254)
T ss_dssp HHHGGGCCEEEEEEECCHHH-----HHHHHHHHHHHEE
T ss_pred hhcCcCCCCCEEEECCcHHH-----HHHHHHHHHHHcC
Confidence 87433348999999987542 2345555555543
No 66
>3tqs_A Ribosomal RNA small subunit methyltransferase A; protein synthesis; 1.98A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.49 E-value=1.1e-13 Score=109.40 Aligned_cols=95 Identities=16% Similarity=0.288 Sum_probs=77.6
Q ss_pred ccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEc
Q 028214 24 EQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQC 103 (212)
Q Consensus 24 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~ 103 (212)
+.|.+.+.+...++..+.. .++++|||+|||+|.++..+++.+ .+|+++|+|+.+++.+++++... .+++++++
T Consensus 9 QnFL~d~~i~~~iv~~~~~----~~~~~VLEIG~G~G~lt~~La~~~-~~V~avEid~~~~~~~~~~~~~~-~~v~~i~~ 82 (255)
T 3tqs_A 9 QHFLHDSFVLQKIVSAIHP----QKTDTLVEIGPGRGALTDYLLTEC-DNLALVEIDRDLVAFLQKKYNQQ-KNITIYQN 82 (255)
T ss_dssp CCEECCHHHHHHHHHHHCC----CTTCEEEEECCTTTTTHHHHTTTS-SEEEEEECCHHHHHHHHHHHTTC-TTEEEEES
T ss_pred cccccCHHHHHHHHHhcCC----CCcCEEEEEcccccHHHHHHHHhC-CEEEEEECCHHHHHHHHHHHhhC-CCcEEEEc
Confidence 3366677777776655433 478899999999999999999875 59999999999999999998752 27999999
Q ss_pred ccccCcCCC-----cccEEEEcCCCCC
Q 028214 104 DIRNLEWRG-----HVDTVVMNPPFGT 125 (212)
Q Consensus 104 d~~~~~~~~-----~~D~i~~nppy~~ 125 (212)
|+.+++... .|| |++||||+.
T Consensus 83 D~~~~~~~~~~~~~~~~-vv~NlPY~i 108 (255)
T 3tqs_A 83 DALQFDFSSVKTDKPLR-VVGNLPYNI 108 (255)
T ss_dssp CTTTCCGGGSCCSSCEE-EEEECCHHH
T ss_pred chHhCCHHHhccCCCeE-EEecCCccc
Confidence 999986532 577 999999974
No 67
>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*
Probab=99.49 E-value=8.5e-13 Score=106.53 Aligned_cols=110 Identities=13% Similarity=0.112 Sum_probs=88.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
......+..+...+...++.+|||+|||+|.++..+++. + .+|+|+|+|+.+++.|++++...+. +++++++|+.+
T Consensus 55 ~a~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (302)
T 3hem_A 55 EAQYAKRKLALDKLNLEPGMTLLDIGCGWGSTMRHAVAEYD-VNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE 133 (302)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEETCTTSHHHHHHHHHHC-CEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG
T ss_pred HHHHHHHHHHHHHcCCCCcCEEEEeeccCcHHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH
Confidence 344445556666656667889999999999999999977 6 5999999999999999999998876 69999999988
Q ss_pred CcCCCcccEEEEcCCCCCCCC-------CchHHHHHHHHhhcC
Q 028214 108 LEWRGHVDTVVMNPPFGTRKK-------GVDMDFLSMALKVAS 143 (212)
Q Consensus 108 ~~~~~~~D~i~~nppy~~~~~-------~~~~~~l~~~~~~~~ 143 (212)
+ ..+||+|+++..+++..+ .....+++++.+.++
T Consensus 134 ~--~~~fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~Lk 174 (302)
T 3hem_A 134 F--DEPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTP 174 (302)
T ss_dssp C--CCCCSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSC
T ss_pred c--CCCccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcC
Confidence 7 458999999999988733 333567777776654
No 68
>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*
Probab=99.49 E-value=4.5e-13 Score=105.73 Aligned_cols=96 Identities=16% Similarity=0.087 Sum_probs=78.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh------------------cCCceEEEEcccccC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD------------------LELDIDFVQCDIRNL 108 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~------------------~~~~v~~~~~d~~~~ 108 (212)
.++.+|||+|||+|..+..+++.|. +|+|+|+|+.+++.|+++... .+.+++++++|+.++
T Consensus 67 ~~~~~vLD~GCG~G~~~~~La~~G~-~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~l 145 (252)
T 2gb4_A 67 QSGLRVFFPLCGKAIEMKWFADRGH-TVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFDL 145 (252)
T ss_dssp CCSCEEEETTCTTCTHHHHHHHTTC-EEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTTG
T ss_pred CCCCeEEEeCCCCcHHHHHHHHCCC-eEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECccccC
Confidence 3678999999999999999999876 899999999999999876531 123799999999998
Q ss_pred cCC--CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 109 EWR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 109 ~~~--~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+.. .+||+|+++..+++........+++++.+.++
T Consensus 146 ~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~Lk 182 (252)
T 2gb4_A 146 PRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLR 182 (252)
T ss_dssp GGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEE
T ss_pred CcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcC
Confidence 865 48999999988887755555567777777665
No 69
>1wxx_A TT1595, hypothetical protein TTHA1280; thermus thermophillus, methyltransferase, adoMet, structural genomics; 1.80A {Thermus thermophilus} SCOP: b.122.1.9 c.66.1.51 PDB: 1wxw_A 2cww_A*
Probab=99.49 E-value=4.8e-13 Score=111.68 Aligned_cols=95 Identities=22% Similarity=0.220 Sum_probs=77.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC-----CCcccEEEEcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-----RGHVDTVVMNP 121 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-----~~~~D~i~~np 121 (212)
++++|||+|||+|.+++.++.. ..+|+++|+++.+++.|++|++.++. +++++++|+.++.. ..+||+|++||
T Consensus 209 ~~~~VLDlg~G~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~n~~~n~~~~~~~~~~d~~~~~~~~~~~~~~fD~Ii~dp 287 (382)
T 1wxx_A 209 RGERALDVFSYAGGFALHLALG-FREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVLDP 287 (382)
T ss_dssp CEEEEEEETCTTTHHHHHHHHH-EEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEECC
T ss_pred CCCeEEEeeeccCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCCceEEECCHHHHHHHHHhcCCCeeEEEECC
Confidence 6789999999999999999987 66899999999999999999999987 69999999988654 34899999999
Q ss_pred CCCCCCCCc-------hHHHHHHHHhhcC
Q 028214 122 PFGTRKKGV-------DMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~-------~~~~l~~~~~~~~ 143 (212)
|+....... ...++..+.+.++
T Consensus 288 P~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 316 (382)
T 1wxx_A 288 PAFAKGKKDVERAYRAYKEVNLRAIKLLK 316 (382)
T ss_dssp CCSCCSTTSHHHHHHHHHHHHHHHHHTEE
T ss_pred CCCCCChhHHHHHHHHHHHHHHHHHHhcC
Confidence 987654322 2345556665554
No 70
>2pjd_A Ribosomal RNA small subunit methyltransferase C; gene duplication, RNA modification, SAM binding; 2.10A {Escherichia coli}
Probab=99.49 E-value=1.5e-13 Score=113.11 Aligned_cols=95 Identities=19% Similarity=0.331 Sum_probs=75.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+.+|||+|||+|.+++.+++.+. .+|+++|+|+.+++.+++++..++..++++.+|+.+.. ..+||+|++||||+..
T Consensus 196 ~~~~VLDlGcG~G~~~~~la~~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~~d~~~~~-~~~fD~Iv~~~~~~~g 274 (343)
T 2pjd_A 196 TKGKVLDVGCGAGVLSVAFARHSPKIRLTLCDVSAPAVEASRATLAANGVEGEVFASNVFSEV-KGRFDMIISNPPFHDG 274 (343)
T ss_dssp CCSBCCBTTCTTSHHHHHHHHHCTTCBCEEEESBHHHHHHHHHHHHHTTCCCEEEECSTTTTC-CSCEEEEEECCCCCSS
T ss_pred CCCeEEEecCccCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCEEEEccccccc-cCCeeEEEECCCcccC
Confidence 567999999999999999998753 48999999999999999999988877788999998765 3489999999999863
Q ss_pred C---CCchHHHHHHHHhhcC
Q 028214 127 K---KGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~---~~~~~~~l~~~~~~~~ 143 (212)
. ......+++++.+.++
T Consensus 275 ~~~~~~~~~~~l~~~~~~Lk 294 (343)
T 2pjd_A 275 MQTSLDAAQTLIRGAVRHLN 294 (343)
T ss_dssp SHHHHHHHHHHHHHHGGGEE
T ss_pred ccCCHHHHHHHHHHHHHhCC
Confidence 1 1122345555555543
No 71
>3r0q_C Probable protein arginine N-methyltransferase 4.2; arginine methyltransferase, methylation; HET: SAH; 2.61A {Arabidopsis thaliana}
Probab=99.48 E-value=7.1e-13 Score=110.42 Aligned_cols=98 Identities=16% Similarity=0.156 Sum_probs=79.5
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
...++++|||+|||+|.+++.+++.+..+|+|+|++ .+++.|+++++.++. +++++++|+.++..+.+||+|++++.
T Consensus 60 ~~~~~~~VLDlGcGtG~ls~~la~~g~~~V~gvD~s-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~Iv~~~~ 138 (376)
T 3r0q_C 60 HHFEGKTVLDVGTGSGILAIWSAQAGARKVYAVEAT-KMADHARALVKANNLDHIVEVIEGSVEDISLPEKVDVIISEWM 138 (376)
T ss_dssp TTTTTCEEEEESCTTTHHHHHHHHTTCSEEEEEESS-TTHHHHHHHHHHTTCTTTEEEEESCGGGCCCSSCEEEEEECCC
T ss_pred ccCCCCEEEEeccCcCHHHHHHHhcCCCEEEEEccH-HHHHHHHHHHHHcCCCCeEEEEECchhhcCcCCcceEEEEcCh
Confidence 445789999999999999999999877799999999 999999999998887 59999999999877679999999985
Q ss_pred CCCCC-CCchHHHHHHHHhhcC
Q 028214 123 FGTRK-KGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~-~~~~~~~l~~~~~~~~ 143 (212)
.+... ......+++...+.++
T Consensus 139 ~~~l~~e~~~~~~l~~~~~~Lk 160 (376)
T 3r0q_C 139 GYFLLRESMFDSVISARDRWLK 160 (376)
T ss_dssp BTTBTTTCTHHHHHHHHHHHEE
T ss_pred hhcccchHHHHHHHHHHHhhCC
Confidence 44433 3334445665555544
No 72
>1jsx_A Glucose-inhibited division protein B; methyltransferase fold, structural genomics, PSI, protein structure initiative; 2.40A {Escherichia coli} SCOP: c.66.1.20
Probab=99.48 E-value=1.1e-12 Score=99.99 Aligned_cols=90 Identities=17% Similarity=0.231 Sum_probs=73.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
++.+|||+|||+|.++..++.. +..+++++|+++.+++.+++++...+. +++++++|+.+.+...+||+|+++..
T Consensus 65 ~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~~~~--- 141 (207)
T 1jsx_A 65 QGERFIDVGTGPGLPGIPLSIVRPEAHFTLLDSLGKRVRFLRQVQHELKLENIEPVQSRVEEFPSEPPFDGVISRAF--- 141 (207)
T ss_dssp CSSEEEEETCTTTTTHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCSSEEEEECCTTTSCCCSCEEEEECSCS---
T ss_pred CCCeEEEECCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEecchhhCCccCCcCEEEEecc---
Confidence 4789999999999999999975 456999999999999999999998876 69999999998875558999998752
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
.....+++.+.+..+
T Consensus 142 ---~~~~~~l~~~~~~L~ 156 (207)
T 1jsx_A 142 ---ASLNDMVSWCHHLPG 156 (207)
T ss_dssp ---SSHHHHHHHHTTSEE
T ss_pred ---CCHHHHHHHHHHhcC
Confidence 223456666666554
No 73
>1ve3_A Hypothetical protein PH0226; dimer, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function, NPPSFA; HET: SAM; 2.10A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.48 E-value=7.8e-13 Score=101.95 Aligned_cols=95 Identities=22% Similarity=0.305 Sum_probs=77.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
++.+|||+|||+|.++..+++.+. +++++|+++.+++.|+++...++.+++++++|+.+++... +||+|+++++++..
T Consensus 38 ~~~~vLDlG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~~~~ 116 (227)
T 1ve3_A 38 KRGKVLDLACGVGGFSFLLEDYGF-EVVGVDISEDMIRKAREYAKSRESNVEFIVGDARKLSFEDKTFDYVIFIDSIVHF 116 (227)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTTSCCSCTTCEEEEEEESCGGGC
T ss_pred CCCeEEEEeccCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCceEEECchhcCCCCCCcEEEEEEcCchHhC
Confidence 478999999999999999998766 9999999999999999999877668999999999876544 89999999994332
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
.......+++++.+.++
T Consensus 117 ~~~~~~~~l~~~~~~L~ 133 (227)
T 1ve3_A 117 EPLELNQVFKEVRRVLK 133 (227)
T ss_dssp CHHHHHHHHHHHHHHEE
T ss_pred CHHHHHHHHHHHHHHcC
Confidence 22233456676666655
No 74
>2as0_A Hypothetical protein PH1915; RNA methyltransferase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus horikoshii} SCOP: b.122.1.9 c.66.1.51
Probab=99.48 E-value=1.3e-13 Score=115.54 Aligned_cols=96 Identities=24% Similarity=0.248 Sum_probs=78.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC-----CCcccEEEEc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW-----RGHVDTVVMN 120 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~-----~~~~D~i~~n 120 (212)
++++|||+|||+|.+++.++..+..+|+|+|+++.+++.|++|++.++. +++++++|+.+... ..+||+|++|
T Consensus 217 ~~~~VLDl~~G~G~~~~~la~~g~~~v~~vD~s~~~l~~a~~n~~~n~~~~~v~~~~~d~~~~~~~~~~~~~~fD~Vi~d 296 (396)
T 2as0_A 217 PGDRVLDVFTYTGGFAIHAAIAGADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDIVVLD 296 (396)
T ss_dssp TTCEEEETTCTTTHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEEEEEC
T ss_pred CCCeEEEecCCCCHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEECCHHHHHHHHHhhCCCCCEEEEC
Confidence 6789999999999999999987777999999999999999999999987 79999999987643 2389999999
Q ss_pred CCCCCCCCCc-------hHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGV-------DMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~-------~~~~l~~~~~~~~ 143 (212)
||+....... ...++..+.+..+
T Consensus 297 pP~~~~~~~~~~~~~~~~~~~l~~~~~~Lk 326 (396)
T 2as0_A 297 PPAFVQHEKDLKAGLRAYFNVNFAGLNLVK 326 (396)
T ss_dssp CCCSCSSGGGHHHHHHHHHHHHHHHHTTEE
T ss_pred CCCCCCCHHHHHHHHHHHHHHHHHHHHhcC
Confidence 9987653322 2345556665554
No 75
>3dlc_A Putative S-adenosyl-L-methionine-dependent methyltransferase; structural genomics, joint center for structural genomics; HET: MSE SAM; 1.15A {Methanococcus maripaludis}
Probab=99.48 E-value=6.4e-13 Score=101.63 Aligned_cols=92 Identities=23% Similarity=0.227 Sum_probs=77.8
Q ss_pred CEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
.+|||+|||+|.++..+++.+..+++|+|+++.+++.|++++...+. +++++++|+.+++... +||+|+++.++++.
T Consensus 45 ~~vLdiG~G~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~~l~~~ 124 (219)
T 3dlc_A 45 GTCIDIGSGPGALSIALAKQSDFSIRALDFSKHMNEIALKNIADANLNDRIQIVQGDVHNIPIEDNYADLIVSRGSVFFW 124 (219)
T ss_dssp EEEEEETCTTSHHHHHHHHHSEEEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECBTTBCSSCTTCEEEEEEESCGGGC
T ss_pred CEEEEECCCCCHHHHHHHHcCCCeEEEEECCHHHHHHHHHHHHhccccCceEEEEcCHHHCCCCcccccEEEECchHhhc
Confidence 39999999999999999987445899999999999999999988776 7999999999987654 89999999998876
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
......++++.+.++
T Consensus 125 --~~~~~~l~~~~~~L~ 139 (219)
T 3dlc_A 125 --EDVATAFREIYRILK 139 (219)
T ss_dssp --SCHHHHHHHHHHHEE
T ss_pred --cCHHHHHHHHHHhCC
Confidence 234456777776654
No 76
>1zq9_A Probable dimethyladenosine transferase; SGC, structural genomics, structural genomics consortium; HET: SAM; 1.90A {Homo sapiens} SCOP: c.66.1.24
Probab=99.48 E-value=1.7e-13 Score=110.00 Aligned_cols=95 Identities=18% Similarity=0.264 Sum_probs=78.4
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQC 103 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~ 103 (212)
|...+.+...++..+ ...++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++....+. +++++++
T Consensus 10 fl~d~~i~~~i~~~~----~~~~~~~VLDiG~G~G~lt~~L~~~~~-~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~ 84 (285)
T 1zq9_A 10 ILKNPLIINSIIDKA----ALRPTDVVLEVGPGTGNMTVKLLEKAK-KVVACELDPRLVAELHKRVQGTPVASKLQVLVG 84 (285)
T ss_dssp EECCHHHHHHHHHHT----CCCTTCEEEEECCTTSTTHHHHHHHSS-EEEEEESCHHHHHHHHHHHTTSTTGGGEEEEES
T ss_pred ccCCHHHHHHHHHhc----CCCCCCEEEEEcCcccHHHHHHHhhCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc
Confidence 455666666665443 334778999999999999999998754 899999999999999999876654 7999999
Q ss_pred ccccCcCCCcccEEEEcCCCCCC
Q 028214 104 DIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 104 d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
|+.+.+.+ .||+|++|+||+..
T Consensus 85 D~~~~~~~-~fD~vv~nlpy~~~ 106 (285)
T 1zq9_A 85 DVLKTDLP-FFDTCVANLPYQIS 106 (285)
T ss_dssp CTTTSCCC-CCSEEEEECCGGGH
T ss_pred ceecccch-hhcEEEEecCcccc
Confidence 99987655 89999999999864
No 77
>3dtn_A Putative methyltransferase MM_2633; structural genomics, unknown function, PSI-2, protein structure initiative; 2.09A {Methanosarcina mazei}
Probab=99.47 E-value=6.4e-13 Score=103.13 Aligned_cols=97 Identities=16% Similarity=0.249 Sum_probs=81.3
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
..++.+|||+|||+|.++..++... ..+++|+|+++.+++.|++++...+ +++++++|+.+.+...+||+|+++.+++
T Consensus 42 ~~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~-~~~~~~~d~~~~~~~~~fD~v~~~~~l~ 120 (234)
T 3dtn_A 42 DTENPDILDLGAGTGLLSAFLMEKYPEATFTLVDMSEKMLEIAKNRFRGNL-KVKYIEADYSKYDFEEKYDMVVSALSIH 120 (234)
T ss_dssp SCSSCEEEEETCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTCSCT-TEEEEESCTTTCCCCSCEEEEEEESCGG
T ss_pred CCCCCeEEEecCCCCHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhhccCC-CEEEEeCchhccCCCCCceEEEEeCccc
Confidence 3467899999999999999999763 5699999999999999999987766 8999999999988767999999999998
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
+........+++++.+.++
T Consensus 121 ~~~~~~~~~~l~~~~~~Lk 139 (234)
T 3dtn_A 121 HLEDEDKKELYKRSYSILK 139 (234)
T ss_dssp GSCHHHHHHHHHHHHHHEE
T ss_pred cCCHHHHHHHHHHHHHhcC
Confidence 8744433356777776654
No 78
>4hg2_A Methyltransferase type 11; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MES; 1.60A {Anaeromyxobacter dehalogenans}
Probab=99.47 E-value=1.4e-13 Score=108.98 Aligned_cols=87 Identities=16% Similarity=0.175 Sum_probs=71.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
...+|||+|||+|.++..++..+. +|+|+|+|+.|++.|+++ .+++++++|+++++.++ +||+|++.-.+|+.
T Consensus 39 ~~~~vLDvGcGtG~~~~~l~~~~~-~v~gvD~s~~ml~~a~~~-----~~v~~~~~~~e~~~~~~~sfD~v~~~~~~h~~ 112 (257)
T 4hg2_A 39 ARGDALDCGCGSGQASLGLAEFFE-RVHAVDPGEAQIRQALRH-----PRVTYAVAPAEDTGLPPASVDVAIAAQAMHWF 112 (257)
T ss_dssp CSSEEEEESCTTTTTHHHHHTTCS-EEEEEESCHHHHHTCCCC-----TTEEEEECCTTCCCCCSSCEEEEEECSCCTTC
T ss_pred CCCCEEEEcCCCCHHHHHHHHhCC-EEEEEeCcHHhhhhhhhc-----CCceeehhhhhhhcccCCcccEEEEeeehhHh
Confidence 356899999999999999998754 899999999999887643 27999999999998776 99999999999887
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
. ...+++++.++++
T Consensus 113 ~---~~~~~~e~~rvLk 126 (257)
T 4hg2_A 113 D---LDRFWAELRRVAR 126 (257)
T ss_dssp C---HHHHHHHHHHHEE
T ss_pred h---HHHHHHHHHHHcC
Confidence 4 3356666666654
No 79
>3lcc_A Putative methyl chloride transferase; halide methyltransferase; HET: SAH; 1.80A {Arabidopsis thaliana}
Probab=99.47 E-value=4.4e-13 Score=104.23 Aligned_cols=95 Identities=17% Similarity=0.114 Sum_probs=80.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
++.+|||+|||+|.++..++..+ .+|+|+|+++.+++.|+++....+. +++++++|+.+++...+||+|+++..+++
T Consensus 66 ~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~~ 144 (235)
T 3lcc_A 66 PLGRALVPGCGGGHDVVAMASPE-RFVVGLDISESALAKANETYGSSPKAEYFSFVKEDVFTWRPTELFDLIFDYVFFCA 144 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHCBTT-EEEEEECSCHHHHHHHHHHHTTSGGGGGEEEECCCTTTCCCSSCEEEEEEESSTTT
T ss_pred CCCCEEEeCCCCCHHHHHHHhCC-CeEEEEECCHHHHHHHHHHhhccCCCcceEEEECchhcCCCCCCeeEEEEChhhhc
Confidence 45699999999999999998754 4899999999999999999876432 79999999999876669999999999988
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
........+++++.+.++
T Consensus 145 ~~~~~~~~~l~~~~~~Lk 162 (235)
T 3lcc_A 145 IEPEMRPAWAKSMYELLK 162 (235)
T ss_dssp SCGGGHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHHCC
Confidence 765566677887777665
No 80
>1wzn_A SAM-dependent methyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: SAH; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.43
Probab=99.47 E-value=1.1e-12 Score=102.96 Aligned_cols=108 Identities=19% Similarity=0.260 Sum_probs=81.1
Q ss_pred HHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcc
Q 028214 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHV 114 (212)
Q Consensus 35 ~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~ 114 (212)
..+..........++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.|+++....+.+++++++|+.+++...+|
T Consensus 28 ~~~~~~~~~~~~~~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~f 106 (252)
T 1wzn_A 28 DFVEEIFKEDAKREVRRVLDLACGTGIPTLELAERGY-EVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEIAFKNEF 106 (252)
T ss_dssp HHHHHHHHHTCSSCCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGCCCCSCE
T ss_pred HHHHHHHHHhcccCCCEEEEeCCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEECChhhcccCCCc
Confidence 3444444444445678999999999999999998755 899999999999999999988777899999999988766689
Q ss_pred cEEEEcCC-CCCCCCCchHHHHHHHHhhcC
Q 028214 115 DTVVMNPP-FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 115 D~i~~npp-y~~~~~~~~~~~l~~~~~~~~ 143 (212)
|+|++... +++.........++++.+.++
T Consensus 107 D~v~~~~~~~~~~~~~~~~~~l~~~~~~L~ 136 (252)
T 1wzn_A 107 DAVTMFFSTIMYFDEEDLRKLFSKVAEALK 136 (252)
T ss_dssp EEEEECSSGGGGSCHHHHHHHHHHHHHHEE
T ss_pred cEEEEcCCchhcCCHHHHHHHHHHHHHHcC
Confidence 99997532 222222233456666666554
No 81
>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}
Probab=99.47 E-value=3.2e-12 Score=94.83 Aligned_cols=92 Identities=16% Similarity=0.160 Sum_probs=71.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC--CcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR--GHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~--~~~D~i~~ 119 (212)
...++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|++++..++. ++ ++++|..+.... .+||+|++
T Consensus 22 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~D~i~~ 100 (178)
T 3hm2_A 22 APKPHETLWDIGGGSGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQGAPRAFDDVPDNPDVIFI 100 (178)
T ss_dssp CCCTTEEEEEESTTTTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEECCTTGGGGGCCSCCSEEEE
T ss_pred cccCCCeEEEeCCCCCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEecchHhhhhccCCCCCEEEE
Confidence 3357789999999999999999976 356899999999999999999988876 58 888988553333 48999999
Q ss_pred cCCCCCCCCCchHHHHHHHHhhcC
Q 028214 120 NPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+.++++ ..+++++.+.++
T Consensus 101 ~~~~~~------~~~l~~~~~~L~ 118 (178)
T 3hm2_A 101 GGGLTA------PGVFAAAWKRLP 118 (178)
T ss_dssp CC-TTC------TTHHHHHHHTCC
T ss_pred CCcccH------HHHHHHHHHhcC
Confidence 998875 335555555443
No 82
>2yx1_A Hypothetical protein MJ0883; methyl transferase, tRNA modification enzyme, transferase; HET: SFG; 2.20A {Methanocaldococcus jannaschii} PDB: 2zzn_A* 3ay0_A* 2zzm_A*
Probab=99.47 E-value=1e-12 Score=107.86 Aligned_cols=85 Identities=31% Similarity=0.423 Sum_probs=73.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
++.+|||+|||+|.+++. ++ +..+|+++|+|+.+++.|++|++.++. +++++++|+.++. .+||+|++|||+..
T Consensus 195 ~~~~VLDlg~G~G~~~l~-a~-~~~~V~~vD~s~~ai~~a~~n~~~n~l~~~v~~~~~D~~~~~--~~fD~Vi~dpP~~~ 270 (336)
T 2yx1_A 195 LNDVVVDMFAGVGPFSIA-CK-NAKKIYAIDINPHAIELLKKNIKLNKLEHKIIPILSDVREVD--VKGNRVIMNLPKFA 270 (336)
T ss_dssp TTCEEEETTCTTSHHHHH-TT-TSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCGGGCC--CCEEEEEECCTTTG
T ss_pred CCCEEEEccCccCHHHHh-cc-CCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECChHHhc--CCCcEEEECCcHhH
Confidence 678999999999999999 87 677999999999999999999999986 6999999999887 58999999999763
Q ss_pred CCCCchHHHHHHHHhhc
Q 028214 126 RKKGVDMDFLSMALKVA 142 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~ 142 (212)
. .+++.+.+..
T Consensus 271 ~------~~l~~~~~~L 281 (336)
T 2yx1_A 271 H------KFIDKALDIV 281 (336)
T ss_dssp G------GGHHHHHHHE
T ss_pred H------HHHHHHHHHc
Confidence 2 4555555544
No 83
>3ntv_A MW1564 protein; rossmann fold, putative methyltransferase, transferase; HET: MSE; 1.55A {Staphylococcus aureus}
Probab=99.47 E-value=7.8e-13 Score=102.97 Aligned_cols=112 Identities=9% Similarity=0.124 Sum_probs=85.0
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
......+...... .++.+|||+|||+|..++.++... ..+|+++|+++.+++.|+++++..+. +++++++|+.+
T Consensus 57 ~~~~~~l~~~~~~---~~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 133 (232)
T 3ntv_A 57 RLTLDLIKQLIRM---NNVKNILEIGTAIGYSSMQFASISDDIHVTTIERNETMIQYAKQNLATYHFENQVRIIEGNALE 133 (232)
T ss_dssp HHHHHHHHHHHHH---HTCCEEEEECCSSSHHHHHHHTTCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCGGG
T ss_pred HHHHHHHHHHHhh---cCCCEEEEEeCchhHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 3444444444433 267899999999999999999742 56999999999999999999998876 79999999988
Q ss_pred CcC---CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEe
Q 028214 108 LEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLH 150 (212)
Q Consensus 108 ~~~---~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~ 150 (212)
... ..+||+|+++.+. .....+++.+.+.++.+.++++
T Consensus 134 ~~~~~~~~~fD~V~~~~~~-----~~~~~~l~~~~~~LkpgG~lv~ 174 (232)
T 3ntv_A 134 QFENVNDKVYDMIFIDAAK-----AQSKKFFEIYTPLLKHQGLVIT 174 (232)
T ss_dssp CHHHHTTSCEEEEEEETTS-----SSHHHHHHHHGGGEEEEEEEEE
T ss_pred HHHhhccCCccEEEEcCcH-----HHHHHHHHHHHHhcCCCeEEEE
Confidence 644 3489999999763 3455677888777653333333
No 84
>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*
Probab=99.47 E-value=1.5e-12 Score=105.69 Aligned_cols=104 Identities=14% Similarity=0.180 Sum_probs=84.1
Q ss_pred HHHHHhhcC-CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-
Q 028214 37 LYTAENSFG-DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG- 112 (212)
Q Consensus 37 l~~~~~~~~-~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~- 112 (212)
...+...+. ..++.+|||+|||+|.++..+++....+|+|+|+++.+++.|++++..++. +++++++|+.+++...
T Consensus 105 ~~~l~~~l~~~~~~~~vLDiGcG~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~ 184 (312)
T 3vc1_A 105 AEFLMDHLGQAGPDDTLVDAGCGRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKG 184 (312)
T ss_dssp HHHHHTTSCCCCTTCEEEEESCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTT
T ss_pred HHHHHHHhccCCCCCEEEEecCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCC
Confidence 333445544 456789999999999999999976234899999999999999999998876 6999999999987654
Q ss_pred cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 113 ~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+||+|+++..+++.. ...+++++.+.++
T Consensus 185 ~fD~V~~~~~l~~~~---~~~~l~~~~~~Lk 212 (312)
T 3vc1_A 185 AVTASWNNESTMYVD---LHDLFSEHSRFLK 212 (312)
T ss_dssp CEEEEEEESCGGGSC---HHHHHHHHHHHEE
T ss_pred CEeEEEECCchhhCC---HHHHHHHHHHHcC
Confidence 999999999888763 5566776666654
No 85
>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}
Probab=99.47 E-value=2e-12 Score=98.70 Aligned_cols=81 Identities=15% Similarity=0.087 Sum_probs=70.2
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~npp 122 (212)
...++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|++++...+. +++++++|+.+..... +||+|+++.+
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~D~i~~~~~ 152 (210)
T 3lbf_A 74 ELTPQSRVLEIGTGSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGWQARAPFDAIIVTAA 152 (210)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEESSB
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCCccCCCccEEEEccc
Confidence 3457889999999999999999987 45999999999999999999998776 7999999998865443 8999999887
Q ss_pred CCCC
Q 028214 123 FGTR 126 (212)
Q Consensus 123 y~~~ 126 (212)
+++.
T Consensus 153 ~~~~ 156 (210)
T 3lbf_A 153 PPEI 156 (210)
T ss_dssp CSSC
T ss_pred hhhh
Confidence 7654
No 86
>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*
Probab=99.46 E-value=1.8e-12 Score=103.68 Aligned_cols=108 Identities=17% Similarity=0.205 Sum_probs=86.9
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHH-HcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCc
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAAT-LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~-~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (212)
....+..+...+...++.+|||+|||+|.++..++ ..+. +|+|+|+++.+++.+++++...+. ++++.++|+.+++
T Consensus 49 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~~~-~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~ 127 (287)
T 1kpg_A 49 QIAKIDLALGKLGLQPGMTLLDVGCGWGATMMRAVEKYDV-NVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWEQFD 127 (287)
T ss_dssp HHHHHHHHHTTTTCCTTCEEEEETCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGGGCC
T ss_pred HHHHHHHHHHHcCCCCcCEEEEECCcccHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChhhCC
Confidence 33455555555555678899999999999999999 4455 999999999999999999987765 7999999998876
Q ss_pred CCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 110 WRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 110 ~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+||+|++...+++........+++++.+.++
T Consensus 128 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 159 (287)
T 1kpg_A 128 --EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLP 159 (287)
T ss_dssp --CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSC
T ss_pred --CCeeEEEEeCchhhcChHHHHHHHHHHHHhcC
Confidence 58999999999888755555667777776654
No 87
>3dxy_A TRNA (guanine-N(7)-)-methyltransferase; rossmann fold methyltransferase, tRNA modification, S-adenosyl-L-methionine, TR processing; HET: SAM; 1.50A {Escherichia coli} PDB: 3dxx_A* 3dxz_A*
Probab=99.46 E-value=8.8e-13 Score=101.86 Aligned_cols=96 Identities=15% Similarity=0.185 Sum_probs=75.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccC----cCCCcccEEEEc-
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL----EWRGHVDTVVMN- 120 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~----~~~~~~D~i~~n- 120 (212)
.+.+|||+|||+|.+++.+++.. ...|+|+|+++.+++.|++++...+. +++++++|+.++ ....+||.|+++
T Consensus 34 ~~~~vLDiGcG~G~~~~~lA~~~p~~~v~giD~s~~~l~~a~~~~~~~~l~nv~~~~~Da~~~l~~~~~~~~~d~v~~~~ 113 (218)
T 3dxy_A 34 EAPVTLEIGFGMGASLVAMAKDRPEQDFLGIEVHSPGVGACLASAHEEGLSNLRVMCHDAVEVLHKMIPDNSLRMVQLFF 113 (218)
T ss_dssp CCCEEEEESCTTCHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHTTCSSEEEECSCHHHHHHHHSCTTCEEEEEEES
T ss_pred CCCeEEEEeeeChHHHHHHHHHCCCCeEEEEEecHHHHHHHHHHHHHhCCCcEEEEECCHHHHHHHHcCCCChheEEEeC
Confidence 56799999999999999999763 45899999999999999999998887 899999999885 233489999998
Q ss_pred -CCCCCCCC----CchHHHHHHHHhhcC
Q 028214 121 -PPFGTRKK----GVDMDFLSMALKVAS 143 (212)
Q Consensus 121 -ppy~~~~~----~~~~~~l~~~~~~~~ 143 (212)
+|+..... -....+++++.+.++
T Consensus 114 ~~p~~~~~~~~rr~~~~~~l~~~~r~Lk 141 (218)
T 3dxy_A 114 PDPWHKARHNKRRIVQVPFAELVKSKLQ 141 (218)
T ss_dssp CCCCCSGGGGGGSSCSHHHHHHHHHHEE
T ss_pred CCCccchhhhhhhhhhHHHHHHHHHHcC
Confidence 66543311 122357777776655
No 88
>3lkd_A Type I restriction-modification system methyltransferase subunit; Q5M500_STRT2, STU0711, NESG, SUR80, structural genomics, PSI-2; 2.25A {Streptococcus thermophilus}
Probab=99.46 E-value=5.8e-13 Score=115.50 Aligned_cols=107 Identities=19% Similarity=0.161 Sum_probs=85.3
Q ss_pred ccccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc----CCCeEEEEeCChHHHHHHHHHHhhcC
Q 028214 20 KVELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----GADQVIAIDIDSDSLELASENAADLE 95 (212)
Q Consensus 20 ~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~----~~~~v~~~D~~~~~~~~a~~~~~~~~ 95 (212)
.....+|.||+.++..|+..+.......++.+|+|++||||.+.+.++++ +...++|+|+++.++..|+.|+...+
T Consensus 193 ~k~~G~fyTP~~Vv~lmv~ll~~~~~~~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~i~G~Eid~~~~~lA~~Nl~l~g 272 (542)
T 3lkd_A 193 GKKAGEFYTPQPVAKLMTQIAFLGREDKQGFTLYDATMGSGSLLLNAKRYSRQPQTVVYFGQELNTSTYNLARMNMILHG 272 (542)
T ss_dssp --CCSSCCCCHHHHHHHHHHHHTTCTTCTTCEEEETTCTTSTTGGGHHHHCSCTTTCEEEEEESCHHHHHHHHHHHHHTT
T ss_pred cccCCeecccHHHHHHHHHHHhcccCCCCCCEEeecccchhHHHHHHHHHHHhccCceEEEEECcHHHHHHHHHHHHHcC
Confidence 34578899999988887776664322346789999999999999888865 24589999999999999999998877
Q ss_pred C---ceEEEEcccccC--cC--CCcccEEEEcCCCCCC
Q 028214 96 L---DIDFVQCDIRNL--EW--RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 96 ~---~v~~~~~d~~~~--~~--~~~~D~i~~nppy~~~ 126 (212)
. ++.+.++|.+.. +. ..+||+|++||||...
T Consensus 273 i~~~~~~I~~gDtL~~d~p~~~~~~fD~IvaNPPf~~~ 310 (542)
T 3lkd_A 273 VPIENQFLHNADTLDEDWPTQEPTNFDGVLMNPPYSAK 310 (542)
T ss_dssp CCGGGEEEEESCTTTSCSCCSSCCCBSEEEECCCTTCC
T ss_pred CCcCccceEecceecccccccccccccEEEecCCcCCc
Confidence 6 578999998876 32 2389999999999743
No 89
>2fyt_A Protein arginine N-methyltransferase 3; structural genomics, structural genomics consortium, SGC; HET: SAH; 2.00A {Homo sapiens} SCOP: c.66.1.6 PDB: 3smq_A* 1f3l_A*
Probab=99.46 E-value=1.5e-12 Score=107.03 Aligned_cols=97 Identities=24% Similarity=0.260 Sum_probs=77.6
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC-CcccEEEEcC-
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNP- 121 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~~D~i~~np- 121 (212)
..++++|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++.++. +++++++|+.+++.+ .+||+|++++
T Consensus 62 ~~~~~~VLDiGcGtG~ls~~la~~g~~~v~gvD~s~-~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~ 140 (340)
T 2fyt_A 62 IFKDKVVLDVGCGTGILSMFAAKAGAKKVLGVDQSE-ILYQAMDIIRLNKLEDTITLIKGKIEEVHLPVEKVDVIISEWM 140 (340)
T ss_dssp GTTTCEEEEETCTTSHHHHHHHHTTCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTTTSCCSCSCEEEEEECCC
T ss_pred hcCCCEEEEeeccCcHHHHHHHHcCCCEEEEEChHH-HHHHHHHHHHHcCCCCcEEEEEeeHHHhcCCCCcEEEEEEcCc
Confidence 357889999999999999999988767999999997 99999999988876 799999999998766 4899999998
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|...........++...+.++
T Consensus 141 ~~~l~~~~~~~~~l~~~~~~Lk 162 (340)
T 2fyt_A 141 GYFLLFESMLDSVLYAKNKYLA 162 (340)
T ss_dssp BTTBTTTCHHHHHHHHHHHHEE
T ss_pred hhhccCHHHHHHHHHHHHhhcC
Confidence 4443333333456665555543
No 90
>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41
Probab=99.46 E-value=1.6e-12 Score=102.53 Aligned_cols=96 Identities=21% Similarity=0.254 Sum_probs=79.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~npp 122 (212)
...++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|++++...+. +++++++|+.+++.++ +||+|+++-.
T Consensus 34 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~ 112 (260)
T 1vl5_A 34 ALKGNEEVLDVATGGGHVANAFAPFVK-KVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA 112 (260)
T ss_dssp TCCSCCEEEEETCTTCHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred CCCCCCEEEEEeCCCCHHHHHHHHhCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence 344788999999999999999998765 999999999999999999987775 7999999999987664 8999999988
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++..+ ....++++.+.++
T Consensus 113 l~~~~d--~~~~l~~~~r~Lk 131 (260)
T 1vl5_A 113 AHHFPN--PASFVSEAYRVLK 131 (260)
T ss_dssp GGGCSC--HHHHHHHHHHHEE
T ss_pred hHhcCC--HHHHHHHHHHHcC
Confidence 877642 3456676666654
No 91
>3ajd_A Putative methyltransferase MJ0026; tRNA, M5C, rossmann fold, structural genomics, riken structu genomics/proteomics initiative; 1.27A {Methanocaldococcus jannaschii} PDB: 3a4t_A
Probab=99.45 E-value=5.3e-13 Score=106.54 Aligned_cols=108 Identities=12% Similarity=0.235 Sum_probs=82.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC-----CCcccE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-----RGHVDT 116 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-----~~~~D~ 116 (212)
...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++|++.++. +++++++|+.++.. ..+||+
T Consensus 80 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~avD~~~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~~~fD~ 159 (274)
T 3ajd_A 80 NPREDDFILDMCAAPGGKTTHLAQLMKNKGTIVAVEISKTRTKALKSNINRMGVLNTIIINADMRKYKDYLLKNEIFFDK 159 (274)
T ss_dssp CCCTTCEEEETTCTTCHHHHHHHHHTTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEECCCHHHHHHHHHHHHHhCCCcEEEEeCChHhcchhhhhccccCCE
Confidence 3457889999999999999999864 346999999999999999999998887 89999999988764 348999
Q ss_pred EEEcCCCCCCCC----------------CchHHHHHHHHhhcC---ceEEEEecC
Q 028214 117 VVMNPPFGTRKK----------------GVDMDFLSMALKVAS---QAVYSLHKT 152 (212)
Q Consensus 117 i~~nppy~~~~~----------------~~~~~~l~~~~~~~~---~~~~~~~~~ 152 (212)
|++||||..... .....+++.+.+..+ ..+|..|..
T Consensus 160 Vl~d~Pcs~~g~~~~~p~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~stcs~ 214 (274)
T 3ajd_A 160 ILLDAPCSGNIIKDKNRNVSEEDIKYCSLRQKELIDIGIDLLKKDGELVYSTCSM 214 (274)
T ss_dssp EEEEECCC------------HHHHTGGGTCHHHHHHHHHHHEEEEEEEEEEESCC
T ss_pred EEEcCCCCCCcccccCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEECCC
Confidence 999999964310 233556666665543 345555543
No 92
>3b3j_A Histone-arginine methyltransferase CARM1; protein arginine methyltransferase 4, APO catalytic domain, regulator, mRNA processing; 2.55A {Rattus norvegicus}
Probab=99.45 E-value=3.4e-13 Score=115.55 Aligned_cols=98 Identities=21% Similarity=0.258 Sum_probs=78.5
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
...++.+|||+|||+|.+++.+++.+..+|+|+|+++ +++.|++++..++. +++++++|+.+++.+.+||+|++++|
T Consensus 155 ~~~~~~~VLDiGcGtG~la~~la~~~~~~V~gvD~s~-~l~~A~~~~~~~gl~~~v~~~~~d~~~~~~~~~fD~Ivs~~~ 233 (480)
T 3b3j_A 155 TDFKDKIVLDVGCGSGILSFFAAQAGARKIYAVEAST-MAQHAEVLVKSNNLTDRIVVIPGKVEEVSLPEQVDIIISEPM 233 (480)
T ss_dssp GGTTTCEEEEESCSTTHHHHHHHHTTCSEEEEEECHH-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSCEEEEECCCC
T ss_pred hhcCCCEEEEecCcccHHHHHHHHcCCCEEEEEEcHH-HHHHHHHHHHHcCCCCcEEEEECchhhCccCCCeEEEEEeCc
Confidence 3346789999999999999999988777999999998 99999999998876 79999999998765568999999999
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++.........+..+.+.++
T Consensus 234 ~~~~~~e~~~~~l~~~~~~Lk 254 (480)
T 3b3j_A 234 GYMLFNERMLESYLHAKKYLK 254 (480)
T ss_dssp HHHHTCHHHHHHHHHGGGGEE
T ss_pred hHhcCcHHHHHHHHHHHHhcC
Confidence 544333333445555555544
No 93
>1xdz_A Methyltransferase GIDB; MCSG, protein structure initiative, structural genomics, methyltransferase fold, PSI; 1.60A {Bacillus subtilis} SCOP: c.66.1.20
Probab=99.45 E-value=1.7e-12 Score=101.45 Aligned_cols=90 Identities=14% Similarity=0.180 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC----CcccEEEEcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTVVMNP 121 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----~~~D~i~~np 121 (212)
++.+|||+|||+|..++.++.. +..+|+|+|+++.+++.|+++++.++. +++++++|+.+++.. .+||+|+++.
T Consensus 70 ~~~~vLDiG~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~~~ 149 (240)
T 1xdz_A 70 QVNTICDVGAGAGFPSLPIKICFPHLHVTIVDSLNKRITFLEKLSEALQLENTTFCHDRAETFGQRKDVRESYDIVTARA 149 (240)
T ss_dssp GCCEEEEECSSSCTTHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHTCSSEEEEESCHHHHTTCTTTTTCEEEEEEEC
T ss_pred CCCEEEEecCCCCHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCEEEEeccHHHhcccccccCCccEEEEec
Confidence 6789999999999999999853 456899999999999999999998887 799999999887642 4899999976
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
. .....+++.+.+.++
T Consensus 150 ~------~~~~~~l~~~~~~Lk 165 (240)
T 1xdz_A 150 V------ARLSVLSELCLPLVK 165 (240)
T ss_dssp C------SCHHHHHHHHGGGEE
T ss_pred c------CCHHHHHHHHHHhcC
Confidence 3 234567777776654
No 94
>1xtp_A LMAJ004091AAA; SGPP, structural genomics, PSI, protein structure initiative dependent methyltransferase; HET: SAI; 1.94A {Leishmania major} SCOP: c.66.1.42
Probab=99.45 E-value=9.9e-13 Score=103.12 Aligned_cols=107 Identities=12% Similarity=0.014 Sum_probs=83.8
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cc
Q 028214 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HV 114 (212)
Q Consensus 36 ~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~ 114 (212)
....+...+...++.+|||+|||+|.++..++..+..+|+++|+++.+++.++++.... .+++++++|+.+++... +|
T Consensus 81 ~~~~~l~~l~~~~~~~vLDiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~f 159 (254)
T 1xtp_A 81 GSRNFIASLPGHGTSRALDCGAGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGM-PVGKFILASMETATLPPNTY 159 (254)
T ss_dssp HHHHHHHTSTTCCCSEEEEETCTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTS-SEEEEEESCGGGCCCCSSCE
T ss_pred HHHHHHHhhcccCCCEEEEECCCcCHHHHHHHHhhcCEEEEEeCCHHHHHHHHHHhccC-CceEEEEccHHHCCCCCCCe
Confidence 33444444444578899999999999999998776668999999999999999998754 37999999999887654 89
Q ss_pred cEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 115 DTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 115 D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|+|+++..+++........+++++.+.++
T Consensus 160 D~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 188 (254)
T 1xtp_A 160 DLIVIQWTAIYLTDADFVKFFKHCQQALT 188 (254)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred EEEEEcchhhhCCHHHHHHHHHHHHHhcC
Confidence 99999988877644334566776666654
No 95
>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*
Probab=99.45 E-value=6.8e-13 Score=104.60 Aligned_cols=106 Identities=18% Similarity=0.092 Sum_probs=84.4
Q ss_pred HHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-ccc
Q 028214 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVD 115 (212)
Q Consensus 37 l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D 115 (212)
+..+...+...++.+|||+|||+|.++..+++....+|+|+|+++.+++.|+++.... .+++++++|+.+.+.+. +||
T Consensus 44 ~~~~~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~-~~~~~~~~d~~~~~~~~~~fD 122 (266)
T 3ujc_A 44 TKKILSDIELNENSKVLDIGSGLGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGN-NKIIFEANDILTKEFPENNFD 122 (266)
T ss_dssp HHHHTTTCCCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSC-TTEEEEECCTTTCCCCTTCEE
T ss_pred HHHHHHhcCCCCCCEEEEECCCCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcC-CCeEEEECccccCCCCCCcEE
Confidence 4444555455678899999999999999999763459999999999999999988664 37999999999887654 899
Q ss_pred EEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 116 TVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 116 ~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|+++..+++........+++++.+.++
T Consensus 123 ~v~~~~~l~~~~~~~~~~~l~~~~~~L~ 150 (266)
T 3ujc_A 123 LIYSRDAILALSLENKNKLFQKCYKWLK 150 (266)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEE
T ss_pred EEeHHHHHHhcChHHHHHHHHHHHHHcC
Confidence 9999999887644444566777766654
No 96
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.45 E-value=2.9e-13 Score=120.90 Aligned_cols=96 Identities=27% Similarity=0.366 Sum_probs=78.2
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcC------------------------------------
Q 028214 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG------------------------------------ 70 (212)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~------------------------------------ 70 (212)
|..+.+++.++....+ .++.+++|++||+|.++++++..+
T Consensus 173 pl~e~LAa~ll~~~~~----~~~~~llDP~CGSGt~lIeAa~~a~~~apG~~R~~f~fe~w~~~~~~~w~~~~~ea~~~~ 248 (703)
T 3v97_A 173 PIKETLAAAIVMRSGW----QPGTPLLDPMCGSGTLLIEAAMLATDRAPGLHRGRWGFSGWAQHDEAIWQEVKAEAQTRA 248 (703)
T ss_dssp SSCHHHHHHHHHHTTC----CTTSCEEETTCTTSHHHHHHHHHHTTCCTTTTCCCCTTTTBTTCCHHHHHHHHHHHHHHH
T ss_pred CCcHHHHHHHHHhhCC----CCCCeEEecCCCCcHHHHHHHHHHhhcCCCCCccccchhhcccCCHHHHHHHHHHHHHHh
Confidence 3445677776665544 367899999999999999998642
Q ss_pred -------CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC--C-cccEEEEcCCCCCC
Q 028214 71 -------ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR--G-HVDTVVMNPPFGTR 126 (212)
Q Consensus 71 -------~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~--~-~~D~i~~nppy~~~ 126 (212)
..+++|+|+|+.+++.|+.|+..+|+ .+++.++|+.++..+ . +||+|++||||...
T Consensus 249 ~~~~~~~~~~i~G~Did~~av~~A~~N~~~agv~~~i~~~~~D~~~~~~~~~~~~~d~Iv~NPPYG~R 316 (703)
T 3v97_A 249 RKGLAEYSSHFYGSDSDARVIQRARTNARLAGIGELITFEVKDVAQLTNPLPKGPYGTVLSNPPYGER 316 (703)
T ss_dssp HHHHHHCCCCEEEEESCHHHHHHHHHHHHHTTCGGGEEEEECCGGGCCCSCTTCCCCEEEECCCCCC-
T ss_pred hhccccCCccEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCccccccCCCCEEEeCCCcccc
Confidence 14799999999999999999999998 499999999987543 2 79999999999865
No 97
>3g5l_A Putative S-adenosylmethionine dependent methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.35A {Listeria monocytogenes str}
Probab=99.45 E-value=2.5e-12 Score=100.94 Aligned_cols=100 Identities=20% Similarity=0.212 Sum_probs=81.3
Q ss_pred HHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEE
Q 028214 40 AENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVV 118 (212)
Q Consensus 40 ~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~ 118 (212)
+...+...++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|+++.. ..+++++++|+.+++... +||+|+
T Consensus 36 l~~~~~~~~~~~vLD~GcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~--~~~~~~~~~d~~~~~~~~~~fD~v~ 113 (253)
T 3g5l_A 36 LKKMLPDFNQKTVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTT--SPVVCYEQKAIEDIAIEPDAYNVVL 113 (253)
T ss_dssp HHTTCCCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHCC--CTTEEEEECCGGGCCCCTTCEEEEE
T ss_pred HHHhhhccCCCEEEEECCCCCHHHHHHHHcCCCEEEEEECCHHHHHHHHHhhc--cCCeEEEEcchhhCCCCCCCeEEEE
Confidence 34444555788999999999999999998876699999999999999999876 237999999999887654 899999
Q ss_pred EcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
++..+++.. .....++++.+.++
T Consensus 114 ~~~~l~~~~--~~~~~l~~~~~~Lk 136 (253)
T 3g5l_A 114 SSLALHYIA--SFDDICKKVYINLK 136 (253)
T ss_dssp EESCGGGCS--CHHHHHHHHHHHEE
T ss_pred Echhhhhhh--hHHHHHHHHHHHcC
Confidence 999888762 34566777666654
No 98
>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}
Probab=99.44 E-value=4e-13 Score=108.33 Aligned_cols=94 Identities=16% Similarity=0.148 Sum_probs=78.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHH--cCCCeEEEEeCChHHHHHHHHHHhhc---CCceEEEEcccccCcCC-------Ccc
Q 028214 47 VSNKVVADFGCGCGTLGAAATL--LGADQVIAIDIDSDSLELASENAADL---ELDIDFVQCDIRNLEWR-------GHV 114 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~--~~~~~v~~~D~~~~~~~~a~~~~~~~---~~~v~~~~~d~~~~~~~-------~~~ 114 (212)
.++.+|||+|||+|..+..+++ .+..+|+|+|+++.+++.|++++... ..+++++++|+.+++.. .+|
T Consensus 35 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f 114 (299)
T 3g5t_A 35 GERKLLVDVGCGPGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQKI 114 (299)
T ss_dssp SCCSEEEEETCTTTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSCE
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCCe
Confidence 3788999999999999999995 34679999999999999999998876 33899999999987643 389
Q ss_pred cEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 115 DTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 115 D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|+|+++..+++. ....+++++.+.++
T Consensus 115 D~V~~~~~l~~~---~~~~~l~~~~~~Lk 140 (299)
T 3g5t_A 115 DMITAVECAHWF---DFEKFQRSAYANLR 140 (299)
T ss_dssp EEEEEESCGGGS---CHHHHHHHHHHHEE
T ss_pred eEEeHhhHHHHh---CHHHHHHHHHHhcC
Confidence 999999998887 44566776666654
No 99
>3bzb_A Uncharacterized protein; RED ALGA, protein structure initiat center for eukaryotic structural genomics, CESG, structural genomics; 2.79A {Cyanidioschyzon merolae}
Probab=99.44 E-value=4.8e-12 Score=101.30 Aligned_cols=106 Identities=20% Similarity=0.225 Sum_probs=71.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeC-ChHHHHHHHHHH-----hhcCC------ceEEEEcccccC----c-
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDI-DSDSLELASENA-----ADLEL------DIDFVQCDIRNL----E- 109 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~-----~~~~~------~v~~~~~d~~~~----~- 109 (212)
.++++|||+|||+|.+++.+++.+..+|+++|+ ++.+++.|++|+ +.++. ++++...|+.+. .
T Consensus 78 ~~~~~vLDlG~G~G~~~~~~a~~~~~~v~~~D~s~~~~~~~a~~n~~~N~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~ 157 (281)
T 3bzb_A 78 IAGKTVCELGAGAGLVSIVAFLAGADQVVATDYPDPEILNSLESNIREHTANSCSSETVKRASPKVVPYRWGDSPDSLQR 157 (281)
T ss_dssp TTTCEEEETTCTTSHHHHHHHHTTCSEEEEEECSCHHHHHHHHHHHHTTCC----------CCCEEEECCTTSCTHHHHH
T ss_pred cCCCeEEEecccccHHHHHHHHcCCCEEEEEeCCCHHHHHHHHHHHHHhhhhhcccccCCCCCeEEEEecCCCccHHHHh
Confidence 477899999999999999999887669999999 899999999999 44432 477776665442 1
Q ss_pred --CCCcccEEEE-cCCCCCCCCCchHHHHHHHHh---hc-CceEEEEecC
Q 028214 110 --WRGHVDTVVM-NPPFGTRKKGVDMDFLSMALK---VA-SQAVYSLHKT 152 (212)
Q Consensus 110 --~~~~~D~i~~-nppy~~~~~~~~~~~l~~~~~---~~-~~~~~~~~~~ 152 (212)
...+||+|++ |.+|+..........+.+.++ .. ++.+++++.+
T Consensus 158 ~~~~~~fD~Ii~~dvl~~~~~~~~ll~~l~~~Lk~~~p~~gG~l~v~~~~ 207 (281)
T 3bzb_A 158 CTGLQRFQVVLLADLLSFHQAHDALLRSVKMLLALPANDPTAVALVTFTH 207 (281)
T ss_dssp HHSCSSBSEEEEESCCSCGGGHHHHHHHHHHHBCCTTTCTTCEEEEEECC
T ss_pred hccCCCCCEEEEeCcccChHHHHHHHHHHHHHhcccCCCCCCEEEEEEEe
Confidence 1348999987 777764322223333444444 31 2245555555
No 100
>3q7e_A Protein arginine N-methyltransferase 1; HET: SAH; 2.20A {Rattus norvegicus} PDB: 1orh_A* 1ori_A* 1or8_A*
Probab=99.44 E-value=2.1e-12 Score=106.53 Aligned_cols=96 Identities=23% Similarity=0.211 Sum_probs=77.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC-CcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~~D~i~~nppy 123 (212)
.++++|||+|||+|.++..+++.+..+|+|+|+++ +++.|+++++.++. +++++++|+.+++.+ .+||+|+++++.
T Consensus 65 ~~~~~VLDvGcG~G~~~~~la~~g~~~v~gvD~s~-~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Iis~~~~ 143 (349)
T 3q7e_A 65 FKDKVVLDVGSGTGILCMFAAKAGARKVIGIECSS-ISDYAVKIVKANKLDHVVTIIKGKVEEVELPVEKVDIIISEWMG 143 (349)
T ss_dssp HTTCEEEEESCTTSHHHHHHHHTTCSEEEEEECST-HHHHHHHHHHHTTCTTTEEEEESCTTTCCCSSSCEEEEEECCCB
T ss_pred CCCCEEEEEeccchHHHHHHHHCCCCEEEEECcHH-HHHHHHHHHHHcCCCCcEEEEECcHHHccCCCCceEEEEEcccc
Confidence 37889999999999999999998777999999995 99999999998887 499999999998766 499999999875
Q ss_pred CCC-CCCchHHHHHHHHhhcC
Q 028214 124 GTR-KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~-~~~~~~~~l~~~~~~~~ 143 (212)
+.. ........++...+.++
T Consensus 144 ~~l~~~~~~~~~l~~~~r~Lk 164 (349)
T 3q7e_A 144 YCLFYESMLNTVLHARDKWLA 164 (349)
T ss_dssp BTBTBTCCHHHHHHHHHHHEE
T ss_pred ccccCchhHHHHHHHHHHhCC
Confidence 544 23334455555555443
No 101
>1g6q_1 HnRNP arginine N-methyltransferase; SAM-binding domain, beta-barrel, mixed alpha-beta, hexamer; 2.90A {Saccharomyces cerevisiae} SCOP: c.66.1.6
Probab=99.44 E-value=4e-12 Score=104.02 Aligned_cols=95 Identities=22% Similarity=0.267 Sum_probs=76.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC-CcccEEEEcCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-GHVDTVVMNPPFG 124 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-~~~D~i~~nppy~ 124 (212)
++++|||+|||+|.++..+++.+..+|+|+|++ .+++.|+++++.++. +++++++|+.+++.+ .+||+|+++++.+
T Consensus 38 ~~~~VLDiGcGtG~ls~~la~~g~~~v~~vD~s-~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~Ivs~~~~~ 116 (328)
T 1g6q_1 38 KDKIVLDVGCGTGILSMFAAKHGAKHVIGVDMS-SIIEMAKELVELNGFSDKITLLRGKLEDVHLPFPKVDIIISEWMGY 116 (328)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTCCSEEEEEESS-THHHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCEEEEEECCCBT
T ss_pred CCCEEEEecCccHHHHHHHHHCCCCEEEEEChH-HHHHHHHHHHHHcCCCCCEEEEECchhhccCCCCcccEEEEeCchh
Confidence 678999999999999999998877799999999 599999999998876 699999999988766 4899999998855
Q ss_pred CC-CCCchHHHHHHHHhhcC
Q 028214 125 TR-KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~-~~~~~~~~l~~~~~~~~ 143 (212)
.. ........+....+.++
T Consensus 117 ~l~~~~~~~~~l~~~~~~Lk 136 (328)
T 1g6q_1 117 FLLYESMMDTVLYARDHYLV 136 (328)
T ss_dssp TBSTTCCHHHHHHHHHHHEE
T ss_pred hcccHHHHHHHHHHHHhhcC
Confidence 44 23333455555544443
No 102
>3h2b_A SAM-dependent methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.44 E-value=1.7e-12 Score=98.53 Aligned_cols=101 Identities=17% Similarity=0.159 Sum_probs=82.1
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-
Q 028214 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG- 112 (212)
Q Consensus 34 ~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~- 112 (212)
...+...... .+.+|||+|||+|.++..++..+. +|+|+|+++.+++.++++.. +++++++|+.+++...
T Consensus 31 ~~~l~~~~~~----~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~ 101 (203)
T 3h2b_A 31 RVLIEPWATG----VDGVILDVGSGTGRWTGHLASLGH-QIEGLEPATRLVELARQTHP----SVTFHHGTITDLSDSPK 101 (203)
T ss_dssp HHHHHHHHHH----CCSCEEEETCTTCHHHHHHHHTTC-CEEEECCCHHHHHHHHHHCT----TSEEECCCGGGGGGSCC
T ss_pred HHHHHHHhcc----CCCeEEEecCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHHhCC----CCeEEeCcccccccCCC
Confidence 3444444444 378999999999999999998755 89999999999999998843 6899999999987654
Q ss_pred cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 113 ~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+||+|+++..+++........+++++.+.++
T Consensus 102 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~ 132 (203)
T 3h2b_A 102 RWAGLLAWYSLIHMGPGELPDALVALRMAVE 132 (203)
T ss_dssp CEEEEEEESSSTTCCTTTHHHHHHHHHHTEE
T ss_pred CeEEEEehhhHhcCCHHHHHHHHHHHHHHcC
Confidence 8999999999888765566677887777765
No 103
>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18
Probab=99.44 E-value=3.2e-12 Score=102.70 Aligned_cols=97 Identities=11% Similarity=0.052 Sum_probs=79.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNP 121 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~np 121 (212)
...++.+|||+|||+|.++..+++....+|+|+|+++.+++.|+++....+. +++++++|+.+++.++ +||+|+++.
T Consensus 79 ~~~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~ 158 (297)
T 2o57_A 79 VLQRQAKGLDLGAGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQD 158 (297)
T ss_dssp CCCTTCEEEEETCTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEES
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEecc
Confidence 3457789999999999999999976234899999999999999999987765 6999999999987655 899999998
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+++... ...+++++.+.++
T Consensus 159 ~l~~~~~--~~~~l~~~~~~Lk 178 (297)
T 2o57_A 159 AFLHSPD--KLKVFQECARVLK 178 (297)
T ss_dssp CGGGCSC--HHHHHHHHHHHEE
T ss_pred hhhhcCC--HHHHHHHHHHHcC
Confidence 8877643 4566777666654
No 104
>3ftd_A Dimethyladenosine transferase; KSGA, rossmann-like fold, RNA methyltransferase, mtase, anti resistance, methyltransferase, RNA-binding; 1.44A {Aquifex aeolicus} PDB: 3ftc_A 3fte_A 3ftf_A* 3r9x_B*
Probab=99.44 E-value=2e-13 Score=107.57 Aligned_cols=99 Identities=15% Similarity=0.212 Sum_probs=77.2
Q ss_pred cccccc-CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCce
Q 028214 20 KVELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDI 98 (212)
Q Consensus 20 ~~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v 98 (212)
...+.| |.+.+.+...++..+. ..++++|||+|||+|.++..+++.+..+|+|+|+|+.+++.++++ . ..++
T Consensus 6 ~k~~GQnfl~d~~i~~~iv~~~~----~~~~~~VLDiG~G~G~lt~~L~~~~~~~v~avEid~~~~~~~~~~-~--~~~v 78 (249)
T 3ftd_A 6 KKSFGQHLLVSEGVLKKIAEELN----IEEGNTVVEVGGGTGNLTKVLLQHPLKKLYVIELDREMVENLKSI-G--DERL 78 (249)
T ss_dssp --CCCSSCEECHHHHHHHHHHTT----CCTTCEEEEEESCHHHHHHHHTTSCCSEEEEECCCHHHHHHHTTS-C--CTTE
T ss_pred CCcccccccCCHHHHHHHHHhcC----CCCcCEEEEEcCchHHHHHHHHHcCCCeEEEEECCHHHHHHHHhc-c--CCCe
Confidence 334455 6666777766665433 347889999999999999999988657999999999999999988 3 2379
Q ss_pred EEEEcccccCcCCC--cccEEEEcCCCCC
Q 028214 99 DFVQCDIRNLEWRG--HVDTVVMNPPFGT 125 (212)
Q Consensus 99 ~~~~~d~~~~~~~~--~~D~i~~nppy~~ 125 (212)
+++++|+.+++.+. ....|++||||+.
T Consensus 79 ~~i~~D~~~~~~~~~~~~~~vv~NlPy~i 107 (249)
T 3ftd_A 79 EVINEDASKFPFCSLGKELKVVGNLPYNV 107 (249)
T ss_dssp EEECSCTTTCCGGGSCSSEEEEEECCTTT
T ss_pred EEEEcchhhCChhHccCCcEEEEECchhc
Confidence 99999999987654 2348999999974
No 105
>1qam_A ERMC' methyltransferase; rRNA methyltransferase ERMC', cofactor analogs; 2.20A {Bacillus subtilis} SCOP: c.66.1.24 PDB: 1qan_A* 1qao_A* 1qaq_A* 2erc_A
Probab=99.43 E-value=4.2e-13 Score=105.43 Aligned_cols=93 Identities=16% Similarity=0.267 Sum_probs=74.6
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccc
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDI 105 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~ 105 (212)
|.+.+.+...++. .+...++.+|||+|||+|.++..+++.+ .+|+|+|+|+.+++.++++....+ +++++++|+
T Consensus 12 fl~d~~~~~~i~~----~~~~~~~~~VLDiG~G~G~lt~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~D~ 85 (244)
T 1qam_A 12 FITSKHNIDKIMT----NIRLNEHDNIFEIGSGKGHFTLELVQRC-NFVTAIEIDHKLCKTTENKLVDHD-NFQVLNKDI 85 (244)
T ss_dssp BCCCHHHHHHHHT----TCCCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEECSCHHHHHHHHHHTTTCC-SEEEECCCG
T ss_pred ccCCHHHHHHHHH----hCCCCCCCEEEEEeCCchHHHHHHHHcC-CeEEEEECCHHHHHHHHHhhccCC-CeEEEEChH
Confidence 5566666655543 3333478899999999999999999876 599999999999999999986532 799999999
Q ss_pred ccCcCCC--cccEEEEcCCCCC
Q 028214 106 RNLEWRG--HVDTVVMNPPFGT 125 (212)
Q Consensus 106 ~~~~~~~--~~D~i~~nppy~~ 125 (212)
.+++... .| .|++||||+.
T Consensus 86 ~~~~~~~~~~~-~vv~nlPy~~ 106 (244)
T 1qam_A 86 LQFKFPKNQSY-KIFGNIPYNI 106 (244)
T ss_dssp GGCCCCSSCCC-EEEEECCGGG
T ss_pred HhCCcccCCCe-EEEEeCCccc
Confidence 9987653 34 7999999974
No 106
>2r6z_A UPF0341 protein in RSP 3' region; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 1.80A {Neisseria gonorrhoeae}
Probab=99.43 E-value=1.9e-13 Score=108.26 Aligned_cols=79 Identities=22% Similarity=0.239 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCCh-------HHHHHHHHHHhhcCC--ceEEEEcccccCcC--C---Cc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS-------DSLELASENAADLEL--DIDFVQCDIRNLEW--R---GH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~-------~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~---~~ 113 (212)
++.+|||+|||+|.+++.+++.+. +|+++|+|+ .+++.|++|++.++. +++++++|+.++.. . .+
T Consensus 83 ~~~~VLDlgcG~G~~a~~lA~~g~-~V~~vD~s~~~~~ll~~~l~~a~~n~~~~~~~~ri~~~~~d~~~~l~~~~~~~~~ 161 (258)
T 2r6z_A 83 AHPTVWDATAGLGRDSFVLASLGL-TVTAFEQHPAVACLLSDGIRRALLNPETQDTAARINLHFGNAAEQMPALVKTQGK 161 (258)
T ss_dssp GCCCEEETTCTTCHHHHHHHHTTC-CEEEEECCHHHHHHHHHHHHHHHHSHHHHHHHTTEEEEESCHHHHHHHHHHHHCC
T ss_pred CcCeEEEeeCccCHHHHHHHHhCC-EEEEEECChhhhHHHHHHHHHHHhHHHhhCCccCeEEEECCHHHHHHhhhccCCC
Confidence 567999999999999999998754 899999999 999999999887765 49999999988532 1 47
Q ss_pred ccEEEEcCCCCCCC
Q 028214 114 VDTVVMNPPFGTRK 127 (212)
Q Consensus 114 ~D~i~~nppy~~~~ 127 (212)
||+|++||||.+..
T Consensus 162 fD~V~~dP~~~~~~ 175 (258)
T 2r6z_A 162 PDIVYLDPMYPERR 175 (258)
T ss_dssp CSEEEECCCC----
T ss_pred ccEEEECCCCCCcc
Confidence 99999999997753
No 107
>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*
Probab=99.43 E-value=3.5e-12 Score=100.34 Aligned_cols=92 Identities=23% Similarity=0.258 Sum_probs=75.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~n 120 (212)
...++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|+++++.++. +++++++|+.+.....+||+|++|
T Consensus 90 ~~~~~~~vldiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~ 169 (255)
T 3mb5_A 90 GISPGDFIVEAGVGSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIYEGIEEENVDHVILD 169 (255)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGGGCCCCCSEEEEEEC
T ss_pred CCCCCCEEEEecCCchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchhhccCCCCcCEEEEC
Confidence 4457889999999999999999976 4 56999999999999999999998876 499999999977555589999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|.. ..+++++.+.++
T Consensus 170 ~~~~-------~~~l~~~~~~L~ 185 (255)
T 3mb5_A 170 LPQP-------ERVVEHAAKALK 185 (255)
T ss_dssp SSCG-------GGGHHHHHHHEE
T ss_pred CCCH-------HHHHHHHHHHcC
Confidence 9832 234555555544
No 108
>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*
Probab=99.43 E-value=3.8e-12 Score=95.21 Aligned_cols=107 Identities=20% Similarity=0.270 Sum_probs=83.1
Q ss_pred CCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcc
Q 028214 27 PTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCD 104 (212)
Q Consensus 27 ~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d 104 (212)
++...+...++... ...++.+|||+|||+|.++..+++.+ .+|+++|+++.+++.+++++..++. ++++.++|
T Consensus 16 ~~~~~~~~~~~~~~----~~~~~~~vldiG~G~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d 90 (192)
T 1l3i_A 16 PTAMEVRCLIMCLA----EPGKNDVAVDVGCGTGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD 90 (192)
T ss_dssp CCCHHHHHHHHHHH----CCCTTCEEEEESCTTSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESC
T ss_pred CChHHHHHHHHHhc----CCCCCCEEEEECCCCCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecC
Confidence 44555555444433 33478899999999999999999876 6999999999999999999988776 79999999
Q ss_pred cccCcCC-CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 105 IRNLEWR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 105 ~~~~~~~-~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+.+.... .+||+|++++++++ ...+++.+.+..+
T Consensus 91 ~~~~~~~~~~~D~v~~~~~~~~-----~~~~l~~~~~~l~ 125 (192)
T 1l3i_A 91 APEALCKIPDIDIAVVGGSGGE-----LQEILRIIKDKLK 125 (192)
T ss_dssp HHHHHTTSCCEEEEEESCCTTC-----HHHHHHHHHHTEE
T ss_pred HHHhcccCCCCCEEEECCchHH-----HHHHHHHHHHhcC
Confidence 9873332 48999999988643 3566777776654
No 109
>3uwp_A Histone-lysine N-methyltransferase, H3 lysine-79; epigenetics, tubercidin, structu genomics, structural genomics consortium, SGC; HET: 5ID; 2.05A {Homo sapiens} PDB: 4eqz_A* 3sx0_A* 4er0_A* 4er7_A* 1nw3_A* 4er6_A* 4er5_A* 3qow_A* 3qox_A* 4ek9_A* 4ekg_A* 4eki_A* 4er3_A* 3sr4_A*
Probab=99.43 E-value=1.1e-12 Score=109.15 Aligned_cols=106 Identities=10% Similarity=0.093 Sum_probs=78.1
Q ss_pred HHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHh-------hcC---CceEEEEc
Q 028214 35 RMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAA-------DLE---LDIDFVQC 103 (212)
Q Consensus 35 ~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~-------~~~---~~v~~~~~ 103 (212)
..+..++..+...++.+|||+|||+|.+++.++.. +..+|+|+|+++.+++.|+++.+ .++ .+++++++
T Consensus 160 ~~i~~il~~l~l~~gd~VLDLGCGtG~l~l~lA~~~g~~kVvGIDiS~~~lelAr~n~e~frkr~~~~Gl~~~rVefi~G 239 (438)
T 3uwp_A 160 DLVAQMIDEIKMTDDDLFVDLGSGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERG 239 (438)
T ss_dssp HHHHHHHHHHCCCTTCEEEEESCTTSHHHHHHHHHCCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHHTBCCCEEEEEEC
T ss_pred HHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHHHHHHHHhCCCCCCeEEEEC
Confidence 33344444445568899999999999999999854 55579999999999999988653 233 27999999
Q ss_pred ccccCcCCC---cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 104 DIRNLEWRG---HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 104 d~~~~~~~~---~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|+.+.+... .||+|++|++|+. ......+.+..+.++
T Consensus 240 D~~~lp~~d~~~~aDVVf~Nn~~F~---pdl~~aL~Ei~RvLK 279 (438)
T 3uwp_A 240 DFLSEEWRERIANTSVIFVNNFAFG---PEVDHQLKERFANMK 279 (438)
T ss_dssp CTTSHHHHHHHHTCSEEEECCTTCC---HHHHHHHHHHHTTSC
T ss_pred cccCCccccccCCccEEEEcccccC---chHHHHHHHHHHcCC
Confidence 999887542 7999999998753 233344555555544
No 110
>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}
Probab=99.43 E-value=1.3e-12 Score=100.36 Aligned_cols=92 Identities=21% Similarity=0.244 Sum_probs=77.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~ 127 (212)
++.+|||+|||+|.++..++..+. +++|+|+++.+++.++++.. .+++++++|+.+++...+||+|+++..+++..
T Consensus 45 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~---~~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 120 (220)
T 3hnr_A 45 SFGNVLEFGVGTGNLTNKLLLAGR-TVYGIEPSREMRMIAKEKLP---KEFSITEGDFLSFEVPTSIDTIVSTYAFHHLT 120 (220)
T ss_dssp CCSEEEEECCTTSHHHHHHHHTTC-EEEEECSCHHHHHHHHHHSC---TTCCEESCCSSSCCCCSCCSEEEEESCGGGSC
T ss_pred CCCeEEEeCCCCCHHHHHHHhCCC-eEEEEeCCHHHHHHHHHhCC---CceEEEeCChhhcCCCCCeEEEEECcchhcCC
Confidence 778999999999999999998754 99999999999999999876 26899999999987667999999999988875
Q ss_pred CCchHHHHHHHHhhcC
Q 028214 128 KGVDMDFLSMALKVAS 143 (212)
Q Consensus 128 ~~~~~~~l~~~~~~~~ 143 (212)
.......++++.+.++
T Consensus 121 ~~~~~~~l~~~~~~Lk 136 (220)
T 3hnr_A 121 DDEKNVAIAKYSQLLN 136 (220)
T ss_dssp HHHHHHHHHHHHHHSC
T ss_pred hHHHHHHHHHHHHhcC
Confidence 4443446777666654
No 111
>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.43 E-value=6.4e-13 Score=103.79 Aligned_cols=105 Identities=10% Similarity=0.048 Sum_probs=81.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC--C-CcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--R-GHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--~-~~~D~i~~nppy 123 (212)
.++.+|||+|||+|..+..+++....+++++|+|+.+++.|+++....+.++.++.+|+.+... . .+||.|++|+..
T Consensus 59 ~~G~rVLdiG~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~~ 138 (236)
T 3orh_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred cCCCeEEEECCCccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeeee
Confidence 3788999999999999999998766689999999999999999999888789999999876532 2 289999999875
Q ss_pred CCC---CCCchHHHHHHHHhhcC-ceEEEEec
Q 028214 124 GTR---KKGVDMDFLSMALKVAS-QAVYSLHK 151 (212)
Q Consensus 124 ~~~---~~~~~~~~l~~~~~~~~-~~~~~~~~ 151 (212)
... .......+++++.++++ +++++.++
T Consensus 139 ~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 139 LSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 433 11123356777777765 45555554
No 112
>3dh0_A SAM dependent methyltransferase; cystal structure, PSI-2, NYSGXRC, structural genomics, protein structure initiative; HET: SAM; 2.72A {Aquifex aeolicus}
Probab=99.43 E-value=1.6e-12 Score=99.80 Aligned_cols=97 Identities=23% Similarity=0.316 Sum_probs=80.5
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~n 120 (212)
...++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.+++++...+. +++++++|+.+++... +||+|+++
T Consensus 34 ~~~~~~~vLDiG~G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~ 113 (219)
T 3dh0_A 34 GLKEGMTVLDVGTGAGFYLPYLSKMVGEKGKVYAIDVQEEMVNYAWEKVNKLGLKNVEVLKSEENKIPLPDNTVDFIFMA 113 (219)
T ss_dssp TCCTTCEEEESSCTTCTTHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHTCTTEEEEECBTTBCSSCSSCEEEEEEE
T ss_pred CCCCCCEEEEEecCCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCcEEEEecccccCCCCCCCeeEEEee
Confidence 33477899999999999999999764 35999999999999999999988776 7999999999887655 89999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
..+++.. ....+++++.+.++
T Consensus 114 ~~l~~~~--~~~~~l~~~~~~Lk 134 (219)
T 3dh0_A 114 FTFHELS--EPLKFLEELKRVAK 134 (219)
T ss_dssp SCGGGCS--SHHHHHHHHHHHEE
T ss_pred hhhhhcC--CHHHHHHHHHHHhC
Confidence 9888763 23566777666654
No 113
>3kr9_A SAM-dependent methyltransferase; class I rossmann-like methyltransferase fold; 2.00A {Streptococcus pneumoniae} PDB: 3ku1_A*
Probab=99.43 E-value=7.1e-13 Score=102.52 Aligned_cols=102 Identities=13% Similarity=0.062 Sum_probs=75.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
++.+|+|+|||+|.+++.+++.+ ..+|+|+|+|+.+++.|++|++.++. +++++++|..+..... +||+|+..-.
T Consensus 15 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~i~~~~~d~l~~l~~~~~~D~IviaG~- 93 (225)
T 3kr9_A 15 QGAILLDVGSDHAYLPIELVERGQIKSAIAGEVVEGPYQSAVKNVEAHGLKEKIQVRLANGLAAFEETDQVSVITIAGM- 93 (225)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEeCCCcHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEECchhhhcccCcCCCEEEEcCC-
Confidence 56799999999999999999875 45899999999999999999999988 6999999997654433 6998875311
Q ss_pred CCCCCCchHHHHHHHHhhcCceEEEEecCc
Q 028214 124 GTRKKGVDMDFLSMALKVASQAVYSLHKTS 153 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (212)
.......++...........++++.+.
T Consensus 94 ---Gg~~i~~Il~~~~~~L~~~~~lVlq~~ 120 (225)
T 3kr9_A 94 ---GGRLIARILEEGLGKLANVERLILQPN 120 (225)
T ss_dssp ---CHHHHHHHHHHTGGGCTTCCEEEEEES
T ss_pred ---ChHHHHHHHHHHHHHhCCCCEEEEECC
Confidence 111234566666555543344444443
No 114
>3v97_A Ribosomal RNA large subunit methyltransferase L; YCBY, RNA methyltransferase, ribosome RNA, SAH, RLML; HET: SAH OSU; 2.20A {Escherichia coli} PDB: 3v8v_A*
Probab=99.42 E-value=5.5e-13 Score=119.09 Aligned_cols=79 Identities=22% Similarity=0.209 Sum_probs=69.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcC--CCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEW--RGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~--~~~~D~i~~npp 122 (212)
++++|||+|||+|.+++.++..++.+|+++|+|+.+++.|++|++.++. +++++++|+.++.. ..+||+|++|||
T Consensus 539 ~g~~VLDlg~GtG~~sl~aa~~ga~~V~aVD~s~~al~~a~~N~~~ngl~~~~v~~i~~D~~~~l~~~~~~fD~Ii~DPP 618 (703)
T 3v97_A 539 KGKDFLNLFSYTGSATVHAGLGGARSTTTVDMSRTYLEWAERNLRLNGLTGRAHRLIQADCLAWLREANEQFDLIFIDPP 618 (703)
T ss_dssp TTCEEEEESCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSTTEEEEESCHHHHHHHCCCCEEEEEECCC
T ss_pred CCCcEEEeeechhHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHcCCCccceEEEecCHHHHHHhcCCCccEEEECCc
Confidence 6889999999999999999987777899999999999999999999986 59999999988532 238999999999
Q ss_pred CCCC
Q 028214 123 FGTR 126 (212)
Q Consensus 123 y~~~ 126 (212)
+...
T Consensus 619 ~f~~ 622 (703)
T 3v97_A 619 TFSN 622 (703)
T ss_dssp SBC-
T ss_pred cccC
Confidence 8654
No 115
>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*
Probab=99.42 E-value=4e-12 Score=103.21 Aligned_cols=108 Identities=15% Similarity=0.181 Sum_probs=87.0
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCc
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE 109 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~ 109 (212)
....+..+...+...++.+|||+|||+|.++..+++. +. +|+|+|+++.+++.|+++....+. ++++.++|+.+++
T Consensus 75 ~~~~~~~~~~~~~~~~~~~vLDiGcG~G~~~~~la~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~ 153 (318)
T 2fk8_A 75 QYAKVDLNLDKLDLKPGMTLLDIGCGWGTTMRRAVERFDV-NVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWEDFA 153 (318)
T ss_dssp HHHHHHHHHTTSCCCTTCEEEEESCTTSHHHHHHHHHHCC-EEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGGGCC
T ss_pred HHHHHHHHHHhcCCCCcCEEEEEcccchHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChHHCC
Confidence 3445555565555567889999999999999999976 55 999999999999999999988775 5999999998875
Q ss_pred CCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 110 WRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 110 ~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+||+|+++.++++........+++++.+.++
T Consensus 154 --~~fD~v~~~~~l~~~~~~~~~~~l~~~~~~Lk 185 (318)
T 2fk8_A 154 --EPVDRIVSIEAFEHFGHENYDDFFKRCFNIMP 185 (318)
T ss_dssp --CCCSEEEEESCGGGTCGGGHHHHHHHHHHHSC
T ss_pred --CCcCEEEEeChHHhcCHHHHHHHHHHHHHhcC
Confidence 58999999999887754445567777766654
No 116
>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}
Probab=99.42 E-value=1.6e-12 Score=102.84 Aligned_cols=111 Identities=22% Similarity=0.109 Sum_probs=75.0
Q ss_pred hhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccc-cCcCCCcccEEEEc
Q 028214 42 NSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR-NLEWRGHVDTVVMN 120 (212)
Q Consensus 42 ~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~~~~D~i~~n 120 (212)
..+...++.+|||+|||+|.+++.+++.+. +|+|+|+|+.|++.|++++........+...+.. ......+||+|+++
T Consensus 39 ~~l~l~~g~~VLDlGcGtG~~a~~La~~g~-~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~ 117 (261)
T 3iv6_A 39 FLENIVPGSTVAVIGASTRFLIEKALERGA-SVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLND 117 (261)
T ss_dssp HTTTCCTTCEEEEECTTCHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEE
T ss_pred HhcCCCCcCEEEEEeCcchHHHHHHHhcCC-EEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEh
Confidence 333445788999999999999999998765 8999999999999999998765222333222220 01112389999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhc-CceEEEEecCc
Q 028214 121 PPFGTRKKGVDMDFLSMALKVA-SQAVYSLHKTS 153 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~ 153 (212)
..+++.........+.+..+.. ++.+++++..+
T Consensus 118 ~~l~~~~~~~~~~~l~~l~~lLPGG~l~lS~~~g 151 (261)
T 3iv6_A 118 RLINRFTTEEARRACLGMLSLVGSGTVRASVKLG 151 (261)
T ss_dssp SCGGGSCHHHHHHHHHHHHHHHTTSEEEEEEEBS
T ss_pred hhhHhCCHHHHHHHHHHHHHhCcCcEEEEEeccC
Confidence 9988764333334455444332 34666666554
No 117
>3gnl_A Uncharacterized protein, DUF633, LMOF2365_1472; structural genomics, PSI-2, protein structure initiative; 1.50A {Listeria monocytogenes str}
Probab=99.42 E-value=6.7e-13 Score=103.67 Aligned_cols=107 Identities=16% Similarity=0.094 Sum_probs=78.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
++.+|+|+|||+|.+++.+++.+ ..+|+|+|+|+.+++.|++|++.++. +++++++|..+...+. +||+|++.-.
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~avDi~~~al~~A~~N~~~~gl~~~I~v~~gD~l~~~~~~~~~D~Iviagm- 99 (244)
T 3gnl_A 21 KNERIADIGSDHAYLPCFAVKNQTASFAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGM- 99 (244)
T ss_dssp SSEEEEEETCSTTHHHHHHHHTTSEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEE-
T ss_pred CCCEEEEECCccHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEEecchhhccCccccccEEEEeCC-
Confidence 56899999999999999999876 45899999999999999999999987 5999999999877655 5998875211
Q ss_pred CCCCCCchHHHHHHHHhhcCceEEEEecC-chHHHH
Q 028214 124 GTRKKGVDMDFLSMALKVASQAVYSLHKT-STREHV 158 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~ 158 (212)
.......++...........++++.+ .+.+.+
T Consensus 100 ---Gg~lI~~IL~~~~~~L~~~~~lIlq~~~~~~~l 132 (244)
T 3gnl_A 100 ---GGTLIRTILEEGAAKLAGVTKLILQPNIAAWQL 132 (244)
T ss_dssp ---CHHHHHHHHHHTGGGGTTCCEEEEEESSCHHHH
T ss_pred ---chHHHHHHHHHHHHHhCCCCEEEEEcCCChHHH
Confidence 11123455665555554334444444 334433
No 118
>1xxl_A YCGJ protein; structural genomics, protein structure initiative, PSI, NEW YORK SGX research center for structural genomics, nysgxrc; 2.10A {Bacillus subtilis} SCOP: c.66.1.41 PDB: 2glu_A*
Probab=99.42 E-value=4.6e-12 Score=98.83 Aligned_cols=96 Identities=18% Similarity=0.186 Sum_probs=79.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEcCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~npp 122 (212)
...++.+|||+|||+|.++..++..+. +|+++|+++.+++.+++++...+. +++++++|+.+++... +||+|+++..
T Consensus 18 ~~~~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~~~ 96 (239)
T 1xxl_A 18 ECRAEHRVLDIGAGAGHTALAFSPYVQ-ECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFDIITCRYA 96 (239)
T ss_dssp TCCTTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEEEEEEESC
T ss_pred CcCCCCEEEEEccCcCHHHHHHHHhCC-EEEEEECCHHHHHHHHHHHHHcCCCCeEEEecccccCCCCCCcEEEEEECCc
Confidence 345788999999999999999998755 999999999999999999988775 7999999999887664 8999999988
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++.. .....++++.+.++
T Consensus 97 l~~~~--~~~~~l~~~~~~Lk 115 (239)
T 1xxl_A 97 AHHFS--DVRKAVREVARVLK 115 (239)
T ss_dssp GGGCS--CHHHHHHHHHHHEE
T ss_pred hhhcc--CHHHHHHHHHHHcC
Confidence 77653 23456676666654
No 119
>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*
Probab=99.42 E-value=7.5e-12 Score=100.31 Aligned_cols=94 Identities=12% Similarity=0.071 Sum_probs=73.0
Q ss_pred cCCCCCCEEEEEcCCcChHH-HHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcC
Q 028214 44 FGDVSNKVVADFGCGCGTLG-AAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNP 121 (212)
Q Consensus 44 ~~~~~~~~vlDlg~G~G~~~-~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~np 121 (212)
....++++|||+|||+|.++ +.+++....+|+|+|+|+.+++.|+++++..+. +++++++|+.+++ ..+||+|+++-
T Consensus 118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~l~-d~~FDvV~~~a 196 (298)
T 3fpf_A 118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETVID-GLEFDVLMVAA 196 (298)
T ss_dssp TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGGGG-GCCCSEEEECT
T ss_pred cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhhCC-CCCcCEEEECC
Confidence 35568899999999999765 555664456999999999999999999988776 8999999999986 34899999854
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
. ......+++++.+.++
T Consensus 197 ~-----~~d~~~~l~el~r~Lk 213 (298)
T 3fpf_A 197 L-----AEPKRRVFRNIHRYVD 213 (298)
T ss_dssp T-----CSCHHHHHHHHHHHCC
T ss_pred C-----ccCHHHHHHHHHHHcC
Confidence 2 1233456666665544
No 120
>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}
Probab=99.41 E-value=1.5e-11 Score=96.65 Aligned_cols=78 Identities=18% Similarity=0.219 Sum_probs=67.5
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhc-CC-ceEEEEcccccCcCC-CcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRNLEWR-GHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~-~~-~v~~~~~d~~~~~~~-~~~D~i~~ 119 (212)
...++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|+++++.+ +. ++++.++|+.+.+.. .+||+|++
T Consensus 93 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~~~D~v~~ 172 (258)
T 2pwy_A 93 DLAPGMRVLEAGTGSGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEAELEEAAYDGVAL 172 (258)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGCCCCTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhcCCCCCCcCEEEE
Confidence 4457889999999999999999976 4 469999999999999999999877 54 799999999987444 38999999
Q ss_pred cCC
Q 028214 120 NPP 122 (212)
Q Consensus 120 npp 122 (212)
|+|
T Consensus 173 ~~~ 175 (258)
T 2pwy_A 173 DLM 175 (258)
T ss_dssp ESS
T ss_pred CCc
Confidence 987
No 121
>2ar0_A M.ecoki, type I restriction enzyme ecoki M protein; structural genomics, protein structure initiative, nysgxrc; 2.80A {Escherichia coli} SCOP: c.66.1.45 PDB: 2y7c_B 2y7h_B*
Probab=99.41 E-value=6e-13 Score=115.62 Aligned_cols=119 Identities=16% Similarity=0.156 Sum_probs=88.8
Q ss_pred cccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc----C---------------CCeEEEEeCCh
Q 028214 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G---------------ADQVIAIDIDS 81 (212)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~----~---------------~~~v~~~D~~~ 81 (212)
....+|.||..+...++..+ ...++.+|+|++||+|.+++.+++. + ...++|+|+++
T Consensus 146 ~~~G~fyTP~~iv~~mv~~l----~p~~~~~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~~~~i~GiEid~ 221 (541)
T 2ar0_A 146 SGAGQYFTPRPLIKTIIHLL----KPQPREVVQDPAAGTAGFLIEADRYVKSQTNDLDDLDGDTQDFQIHRAFIGLELVP 221 (541)
T ss_dssp ----CCCCCHHHHHHHHHHH----CCCTTCCEEETTCTTTHHHHHHHHHHHTTTTTTTTSCHHHHHHHHHTSEEEEESCH
T ss_pred ccCCeeeCCHHHHHHHHHHh----ccCCCCeEecCCcccchHHHHHHHHHHHhhcccccCCHHHHhhhhcceEEEEcCCH
Confidence 34677889988877666443 2346789999999999999888753 1 13799999999
Q ss_pred HHHHHHHHHHhhcCC-c-----eEEEEcccccCcC--CCcccEEEEcCCCCCCCC------------CchHHHHHHHHhh
Q 028214 82 DSLELASENAADLEL-D-----IDFVQCDIRNLEW--RGHVDTVVMNPPFGTRKK------------GVDMDFLSMALKV 141 (212)
Q Consensus 82 ~~~~~a~~~~~~~~~-~-----v~~~~~d~~~~~~--~~~~D~i~~nppy~~~~~------------~~~~~~l~~~~~~ 141 (212)
.+++.|+.|+...+. . +.+.++|.+..+. ..+||+|++||||..... .....|+..+++.
T Consensus 222 ~~~~lA~~nl~l~gi~~~~~~~~~I~~gDtL~~~~~~~~~fD~Vv~NPPf~~~~~~~~~~~~~~~~~~~~~~Fl~~~l~~ 301 (541)
T 2ar0_A 222 GTRRLALMNCLLHDIEGNLDHGGAIRLGNTLGSDGENLPKAHIVATNPPFGSAAGTNITRTFVHPTSNKQLCFMQHIIET 301 (541)
T ss_dssp HHHHHHHHHHHTTTCCCBGGGTBSEEESCTTSHHHHTSCCEEEEEECCCCTTCSSCCCCSCCSSCCSCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCCccccccCCeEeCCCcccccccccCCeEEEECCCcccccchhhHhhcCCCCCchHHHHHHHHHHH
Confidence 999999999987776 3 7899999876542 238999999999986532 2345788887776
Q ss_pred cC
Q 028214 142 AS 143 (212)
Q Consensus 142 ~~ 143 (212)
++
T Consensus 302 Lk 303 (541)
T 2ar0_A 302 LH 303 (541)
T ss_dssp EE
T ss_pred hC
Confidence 54
No 122
>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13
Probab=99.41 E-value=5.8e-12 Score=100.43 Aligned_cols=92 Identities=16% Similarity=0.303 Sum_probs=73.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhc-CC-ceEEEEcccccCcCCCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-EL-DIDFVQCDIRNLEWRGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~-~~-~v~~~~~d~~~~~~~~~~D~i~~n 120 (212)
...++.+|||+|||+|.++..+++. +..+|+++|+++.+++.|+++++.+ +. +++++++|+.+.....+||+|++|
T Consensus 107 ~~~~~~~VLD~G~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~~~~~~fD~Vi~~ 186 (275)
T 1yb2_A 107 GLRPGMDILEVGVGSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIADFISDQMYDAVIAD 186 (275)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTTCCCSCCEEEEEEC
T ss_pred CCCCcCEEEEecCCCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhccCcCCCccEEEEc
Confidence 4457789999999999999999976 3469999999999999999999887 65 799999999885444489999998
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|- ...+++++.+.++
T Consensus 187 ~~~-------~~~~l~~~~~~Lk 202 (275)
T 1yb2_A 187 IPD-------PWNHVQKIASMMK 202 (275)
T ss_dssp CSC-------GGGSHHHHHHTEE
T ss_pred CcC-------HHHHHHHHHHHcC
Confidence 872 1245555555544
No 123
>2ex4_A Adrenal gland protein AD-003; methyltransferase, structural genomics, SGC, structural genomics consortium; HET: SAH; 1.75A {Homo sapiens} SCOP: c.66.1.42
Probab=99.41 E-value=1.1e-12 Score=102.47 Aligned_cols=96 Identities=17% Similarity=0.163 Sum_probs=79.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
++.+|||+|||+|.++..+++.+..+|+++|+++.+++.|+++....+. +++++++|+.+++... +||+|+++..+++
T Consensus 79 ~~~~vLDiGcG~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 158 (241)
T 2ex4_A 79 GTSCALDCGAGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWVIGH 158 (241)
T ss_dssp CCSEEEEETCTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHhhhcCCceEEEEEcChhhcCCCCCCEEEEEEcchhhh
Confidence 5789999999999999998877666999999999999999999877632 6899999998887665 8999999988877
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
........+++++.+.++
T Consensus 159 ~~~~~~~~~l~~~~~~Lk 176 (241)
T 2ex4_A 159 LTDQHLAEFLRRCKGSLR 176 (241)
T ss_dssp SCHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 644333466777766654
No 124
>4htf_A S-adenosylmethionine-dependent methyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE SAM; 1.60A {Escherichia coli}
Probab=99.41 E-value=9.1e-12 Score=99.55 Aligned_cols=93 Identities=19% Similarity=0.291 Sum_probs=77.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCc--CCCcccEEEEcCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE--WRGHVDTVVMNPPF 123 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--~~~~~D~i~~nppy 123 (212)
++.+|||+|||+|.++..++..+. +|+|+|+++.+++.|++++...+. +++++++|+.+++ ...+||+|+++.++
T Consensus 68 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~l 146 (285)
T 4htf_A 68 QKLRVLDAGGGEGQTAIKMAERGH-QVILCDLSAQMIDRAKQAAEAKGVSDNMQFIHCAAQDVASHLETPVDLILFHAVL 146 (285)
T ss_dssp SCCEEEEETCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC-CCGGGEEEEESCGGGTGGGCSSCEEEEEEESCG
T ss_pred CCCEEEEeCCcchHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcceEEEEcCHHHhhhhcCCCceEEEECchh
Confidence 467999999999999999998754 999999999999999999988775 7999999999987 33489999999998
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++... ...+++++.+.++
T Consensus 147 ~~~~~--~~~~l~~~~~~Lk 164 (285)
T 4htf_A 147 EWVAD--PRSVLQTLWSVLR 164 (285)
T ss_dssp GGCSC--HHHHHHHHHHTEE
T ss_pred hcccC--HHHHHHHHHHHcC
Confidence 87632 3467777777765
No 125
>1y8c_A S-adenosylmethionine-dependent methyltransferase; structural genomics, protein structure initiative, PSI; 2.50A {Clostridium acetobutylicum} SCOP: c.66.1.43
Probab=99.41 E-value=5.7e-12 Score=98.07 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=80.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcC-CCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNP-PFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~np-py~~~ 126 (212)
++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++....+.+++++++|+.+++...+||+|+++. .+++.
T Consensus 37 ~~~~vLdiG~G~G~~~~~l~~~~~-~~~~~D~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~ 115 (246)
T 1y8c_A 37 VFDDYLDLACGTGNLTENLCPKFK-NTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNLNINRKFDLITCCLDSTNYI 115 (246)
T ss_dssp CTTEEEEETCTTSTTHHHHGGGSS-EEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGCCCSCCEEEEEECTTGGGGC
T ss_pred CCCeEEEeCCCCCHHHHHHHHCCC-cEEEEECCHHHHHHHHHHHhhcCCCeEEEecccccCCccCCceEEEEcCcccccc
Confidence 678999999999999999998754 8999999999999999999877667999999999887666899999998 88776
Q ss_pred CC-CchHHHHHHHHhhcCc
Q 028214 127 KK-GVDMDFLSMALKVASQ 144 (212)
Q Consensus 127 ~~-~~~~~~l~~~~~~~~~ 144 (212)
.. .....+++++.+.++.
T Consensus 116 ~~~~~~~~~l~~~~~~L~p 134 (246)
T 1y8c_A 116 IDSDDLKKYFKAVSNHLKE 134 (246)
T ss_dssp CSHHHHHHHHHHHHTTEEE
T ss_pred CCHHHHHHHHHHHHHhcCC
Confidence 32 3445677777777653
No 126
>3lec_A NADB-rossmann superfamily protein; PSI, MCSG, structural genomics, midwest CENT structural genomics, protein structure initiative; 1.80A {Streptococcus agalactiae}
Probab=99.41 E-value=3.7e-12 Score=98.72 Aligned_cols=108 Identities=16% Similarity=0.162 Sum_probs=78.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCC-cccEEEE-cCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRG-HVDTVVM-NPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~-~~D~i~~-npp 122 (212)
++.+|+|+|||+|.+++.+++.+ ..+|+|+|+|+.+++.|++|++.++. +++++++|..+...+. .||+|+. +.-
T Consensus 21 ~g~~VlDIGtGsG~l~i~la~~~~~~~V~AvDi~~~al~~A~~N~~~~gl~~~I~~~~gD~l~~~~~~~~~D~IviaGmG 100 (230)
T 3lec_A 21 KGARLLDVGSDHAYLPIFLLQMGYCDFAIAGEVVNGPYQSALKNVSEHGLTSKIDVRLANGLSAFEEADNIDTITICGMG 100 (230)
T ss_dssp TTEEEEEETCSTTHHHHHHHHTTCEEEEEEEESSHHHHHHHHHHHHHTTCTTTEEEEECSGGGGCCGGGCCCEEEEEEEC
T ss_pred CCCEEEEECCchHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECchhhccccccccCEEEEeCCc
Confidence 67899999999999999999876 45899999999999999999999987 6999999999887665 6998764 321
Q ss_pred CCCCCCCchHHHHHHHHhhcCceEEEEecC-chHHHHHH
Q 028214 123 FGTRKKGVDMDFLSMALKVASQAVYSLHKT-STREHVKK 160 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~~~~~~~~~~-~~~~~~~~ 160 (212)
......++...........++++.+ .+.+.+..
T Consensus 101 -----g~lI~~IL~~~~~~l~~~~~lIlqp~~~~~~lr~ 134 (230)
T 3lec_A 101 -----GRLIADILNNDIDKLQHVKTLVLQPNNREDDLRK 134 (230)
T ss_dssp -----HHHHHHHHHHTGGGGTTCCEEEEEESSCHHHHHH
T ss_pred -----hHHHHHHHHHHHHHhCcCCEEEEECCCChHHHHH
Confidence 1123345555554444333444443 34444433
No 127
>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13
Probab=99.41 E-value=1.4e-11 Score=98.17 Aligned_cols=79 Identities=22% Similarity=0.250 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~n 120 (212)
...++.+|||+|||+|.+++.+++. + ..+|+++|+++.+++.|++|++..+. +++++++|+.+.....+||+|++|
T Consensus 109 ~~~~~~~VLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~V~~~ 188 (277)
T 1o54_A 109 DVKEGDRIIDTGVGSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEGFDEKDVDALFLD 188 (277)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGCCSCCSEEEEEEC
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHcccCCccCEEEEC
Confidence 4457889999999999999999976 4 56999999999999999999988775 799999999887444489999999
Q ss_pred CCC
Q 028214 121 PPF 123 (212)
Q Consensus 121 ppy 123 (212)
+|.
T Consensus 189 ~~~ 191 (277)
T 1o54_A 189 VPD 191 (277)
T ss_dssp CSC
T ss_pred CcC
Confidence 984
No 128
>2fca_A TRNA (guanine-N(7)-)-methyltransferase; 2.10A {Bacillus subtilis} SCOP: c.66.1.53
Probab=99.41 E-value=4.3e-12 Score=97.51 Aligned_cols=96 Identities=20% Similarity=0.217 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCc--C-CCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--W-RGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~--~-~~~~D~i~~npp 122 (212)
.+.+|||+|||+|.+++.+++. +..+++|+|+++.+++.|++++...+. +++++++|+.+++ . ..+||.|+++.|
T Consensus 38 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~giD~s~~~l~~a~~~~~~~~~~nv~~~~~d~~~l~~~~~~~~~d~v~~~~~ 117 (213)
T 2fca_A 38 DNPIHIEVGTGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS 117 (213)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred CCceEEEEecCCCHHHHHHHHHCCCCCEEEEEechHHHHHHHHHHHHcCCCCEEEEeCCHHHHHhhcCcCCcCEEEEECC
Confidence 5679999999999999999976 356899999999999999999998876 8999999998864 2 338999998765
Q ss_pred CCCCC------CCchHHHHHHHHhhcC
Q 028214 123 FGTRK------KGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~------~~~~~~~l~~~~~~~~ 143 (212)
-.+.. .-....+++++.+.++
T Consensus 118 ~p~~~~~~~~~rl~~~~~l~~~~~~Lk 144 (213)
T 2fca_A 118 DPWPKKRHEKRRLTYSHFLKKYEEVMG 144 (213)
T ss_dssp CCCCSGGGGGGSTTSHHHHHHHHHHHT
T ss_pred CCCcCccccccccCcHHHHHHHHHHcC
Confidence 43221 1113456666665543
No 129
>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}
Probab=99.40 E-value=3.1e-12 Score=99.43 Aligned_cols=116 Identities=11% Similarity=0.023 Sum_probs=84.9
Q ss_pred cccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEE
Q 028214 23 LEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDF 100 (212)
Q Consensus 23 ~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~ 100 (212)
++.|....+-.++.+...+..+...++++|||+|||+|.++..+++. | ..+|+|+|+++.+++.++++++..+ ++..
T Consensus 52 ~r~w~p~rsklaa~i~~gl~~l~ikpG~~VldlG~G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~-ni~~ 130 (233)
T 4df3_A 52 YREWNAYRSKLAAALLKGLIELPVKEGDRILYLGIASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRR-NIFP 130 (233)
T ss_dssp EEECCTTTCHHHHHHHTTCSCCCCCTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCT-TEEE
T ss_pred eeeECCCchHHHHHHHhchhhcCCCCCCEEEEecCcCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhc-CeeE
Confidence 33343333333444445555566779999999999999999999976 4 5689999999999999999887655 7889
Q ss_pred EEcccccCcCC----CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 101 VQCDIRNLEWR----GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 101 ~~~d~~~~~~~----~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+.+|..+.... ..+|+|+++.+++ .....++.++.+.++
T Consensus 131 V~~d~~~p~~~~~~~~~vDvVf~d~~~~----~~~~~~l~~~~r~LK 173 (233)
T 4df3_A 131 ILGDARFPEKYRHLVEGVDGLYADVAQP----EQAAIVVRNARFFLR 173 (233)
T ss_dssp EESCTTCGGGGTTTCCCEEEEEECCCCT----THHHHHHHHHHHHEE
T ss_pred EEEeccCccccccccceEEEEEEeccCC----hhHHHHHHHHHHhcc
Confidence 99988764321 2899999998765 234456666666654
No 130
>2pxx_A Uncharacterized protein MGC2408; structural genomics consortium, SGC, methyltransferase, LOC84291, transferase; HET: SAH; 1.30A {Homo sapiens}
Probab=99.40 E-value=8.5e-13 Score=100.75 Aligned_cols=106 Identities=17% Similarity=0.209 Sum_probs=79.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.++..+++.+..+++++|+++.+++.++++.... .+++++++|+.+++... +||+|++++++++
T Consensus 41 ~~~~~vLdiGcG~G~~~~~l~~~~~~~v~~~D~s~~~~~~a~~~~~~~-~~i~~~~~d~~~~~~~~~~fD~v~~~~~~~~ 119 (215)
T 2pxx_A 41 RPEDRILVLGCGNSALSYELFLGGFPNVTSVDYSSVVVAAMQACYAHV-PQLRWETMDVRKLDFPSASFDVVLEKGTLDA 119 (215)
T ss_dssp CTTCCEEEETCTTCSHHHHHHHTTCCCEEEEESCHHHHHHHHHHTTTC-TTCEEEECCTTSCCSCSSCEEEEEEESHHHH
T ss_pred CCCCeEEEECCCCcHHHHHHHHcCCCcEEEEeCCHHHHHHHHHhcccC-CCcEEEEcchhcCCCCCCcccEEEECcchhh
Confidence 367899999999999999999886668999999999999999998652 27899999999876554 8999999998854
Q ss_pred CCC-------------CchHHHHHHHHhhcC-ceEEEEecCc
Q 028214 126 RKK-------------GVDMDFLSMALKVAS-QAVYSLHKTS 153 (212)
Q Consensus 126 ~~~-------------~~~~~~l~~~~~~~~-~~~~~~~~~~ 153 (212)
... .....+++++.+.++ ++.+++..+.
T Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~ 161 (215)
T 2pxx_A 120 LLAGERDPWTVSSEGVHTVDQVLSEVSRVLVPGGRFISMTSA 161 (215)
T ss_dssp HTTTCSCTTSCCHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred hccccccccccccchhHHHHHHHHHHHHhCcCCCEEEEEeCC
Confidence 321 122456666666654 3333333333
No 131
>3gu3_A Methyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; HET: SAH; 2.30A {Bacillus cereus} SCOP: c.66.1.49 PDB: 2gh1_A
Probab=99.40 E-value=3.4e-12 Score=102.19 Aligned_cols=95 Identities=21% Similarity=0.282 Sum_probs=80.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
.++.+|||+|||+|..+..++.. + ..+|+|+|+++.+++.|++++...+.+++++++|+.+++...+||+|+++..++
T Consensus 21 ~~~~~vLDiGcG~G~~~~~l~~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~l~ 100 (284)
T 3gu3_A 21 TKPVHIVDYGCGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEIELNDKYDIAICHAFLL 100 (284)
T ss_dssp CSCCEEEEETCTTTHHHHHHTTTSCTTCEEEEEESCHHHHHHHHHHHHSSSSEEEEEESCTTTCCCSSCEEEEEEESCGG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEcchhhcCcCCCeeEEEECChhh
Confidence 47789999999999999999976 3 369999999999999999999887778999999999988766999999999887
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
+..+ ....++++.+.++
T Consensus 101 ~~~~--~~~~l~~~~~~Lk 117 (284)
T 3gu3_A 101 HMTT--PETMLQKMIHSVK 117 (284)
T ss_dssp GCSS--HHHHHHHHHHTEE
T ss_pred cCCC--HHHHHHHHHHHcC
Confidence 7632 2467777777665
No 132
>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}
Probab=99.40 E-value=6.2e-12 Score=97.27 Aligned_cols=119 Identities=10% Similarity=0.023 Sum_probs=88.7
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC---ceEE
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL---DIDF 100 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~ 100 (212)
.+........++..+....+..++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. ++++
T Consensus 34 ~p~i~~~~~~~l~~l~~~~~~~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~ 113 (221)
T 3dr5_A 34 LPAPDEMTGQLLTTLAATTNGNGSTGAIAITPAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRF 113 (221)
T ss_dssp CCCCCHHHHHHHHHHHHHSCCTTCCEEEEESTTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEE
T ss_pred CCCCCHHHHHHHHHHHHhhCCCCCCCEEEEcCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEE
Confidence 34445556666666666543334459999999999999999974 2 46999999999999999999998775 5999
Q ss_pred EEcccccCcC---CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEE
Q 028214 101 VQCDIRNLEW---RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSL 149 (212)
Q Consensus 101 ~~~d~~~~~~---~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~ 149 (212)
+++|+.+... ..+||+|+++.+. .....+++.+.+.++.+.+++
T Consensus 114 ~~gda~~~l~~~~~~~fD~V~~d~~~-----~~~~~~l~~~~~~LkpGG~lv 160 (221)
T 3dr5_A 114 LLSRPLDVMSRLANDSYQLVFGQVSP-----MDLKALVDAAWPLLRRGGALV 160 (221)
T ss_dssp ECSCHHHHGGGSCTTCEEEEEECCCT-----TTHHHHHHHHHHHEEEEEEEE
T ss_pred EEcCHHHHHHHhcCCCcCeEEEcCcH-----HHHHHHHHHHHHHcCCCcEEE
Confidence 9999887643 2489999999763 344567888877766433333
No 133
>3thr_A Glycine N-methyltransferase; GNMT, folate, methyltransferase binding, liver cytosol, transferase-transferase inhibitor C; HET: C2F TAM; 2.00A {Rattus norvegicus} SCOP: c.66.1.5 PDB: 3ths_A* 1xva_A* 1d2c_A 1kia_A* 1nbh_A* 1bhj_A* 2idj_A 2idk_A* 1d2g_A 1d2h_A* 1nbi_A* 1r8x_A 1r8y_A 1r74_A* 2azt_A*
Probab=99.40 E-value=5.7e-12 Score=101.01 Aligned_cols=112 Identities=13% Similarity=0.090 Sum_probs=86.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-----ceEEEEcccccCc---CC-CcccEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-----DIDFVQCDIRNLE---WR-GHVDTVV 118 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-----~v~~~~~d~~~~~---~~-~~~D~i~ 118 (212)
++.+|||+|||+|..+..++..+. +|+|+|+|+.+++.|+++....+. ++.+..+|+.+++ .. .+||+|+
T Consensus 57 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~fD~V~ 135 (293)
T 3thr_A 57 GCHRVLDVACGTGVDSIMLVEEGF-SVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDAVI 135 (293)
T ss_dssp TCCEEEETTCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEEEE
T ss_pred CCCEEEEecCCCCHHHHHHHHCCC-eEEEEECCHHHHHHHHHhhhhcccccccceeeEeecChhhCccccccCCCeEEEE
Confidence 678999999999999999998866 999999999999999988744322 6889999998876 33 4899999
Q ss_pred Ec-CCCCCCCC-----CchHHHHHHHHhhcCceEEEEecCchHHHHHH
Q 028214 119 MN-PPFGTRKK-----GVDMDFLSMALKVASQAVYSLHKTSTREHVKK 160 (212)
Q Consensus 119 ~n-ppy~~~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (212)
++ ..+++... .....+++++.+.++.+.++++...+...+..
T Consensus 136 ~~g~~l~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~~~~~~~ 183 (293)
T 3thr_A 136 CLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVIDHRNYDYILS 183 (293)
T ss_dssp ECTTCGGGSCCSSSSSHHHHHHHHHHHHTEEEEEEEEEEEECHHHHHH
T ss_pred EcChHHhhcCccccCHHHHHHHHHHHHHHcCCCeEEEEEeCCHHHHhh
Confidence 98 67777644 33557788888877654455555555555544
No 134
>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*
Probab=99.40 E-value=1.7e-12 Score=101.06 Aligned_cols=97 Identities=10% Similarity=0.087 Sum_probs=73.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC--cCCC-cccEEEEc-CC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWRG-HVDTVVMN-PP 122 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~~~~-~~D~i~~n-pp 122 (212)
.++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|+++....+.+++++++|+.++ +..+ +||+|++| -+
T Consensus 59 ~~~~~vLDiGcGtG~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~~ 138 (236)
T 1zx0_A 59 SKGGRVLEVGFGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTYP 138 (236)
T ss_dssp TTCEEEEEECCTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCCC
T ss_pred CCCCeEEEEeccCCHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCcc
Confidence 36789999999999999999876656899999999999999999987777899999999987 5544 89999994 22
Q ss_pred CCCC--CCCchHHHHHHHHhhcC
Q 028214 123 FGTR--KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~--~~~~~~~~l~~~~~~~~ 143 (212)
.+.. .......+++++.+.++
T Consensus 139 ~~~~~~~~~~~~~~l~~~~r~Lk 161 (236)
T 1zx0_A 139 LSEETWHTHQFNFIKNHAFRLLK 161 (236)
T ss_dssp CBGGGTTTHHHHHHHHTHHHHEE
T ss_pred cchhhhhhhhHHHHHHHHHHhcC
Confidence 1111 11111244666666665
No 135
>2p8j_A S-adenosylmethionine-dependent methyltransferase; NP_349143.1; HET: PGE GOL; 2.00A {Clostridium acetobutylicum}
Probab=99.40 E-value=4e-12 Score=96.79 Aligned_cols=95 Identities=17% Similarity=0.156 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCcChHHHH-HHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAA-ATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~-~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
++.+|||+|||+|..+.. ++.. ..+|+|+|+|+.+++.+++++...+.+++++++|+.+++.+. +||+|+++.++++
T Consensus 23 ~~~~vLDiGcG~G~~~~~~~~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 101 (209)
T 2p8j_A 23 LDKTVLDCGAGGDLPPLSIFVED-GYKTYGIEISDLQLKKAENFSRENNFKLNISKGDIRKLPFKDESMSFVYSYGTIFH 101 (209)
T ss_dssp SCSEEEEESCCSSSCTHHHHHHT-TCEEEEEECCHHHHHHHHHHHHHHTCCCCEEECCTTSCCSCTTCEEEEEECSCGGG
T ss_pred CCCEEEEECCCCCHHHHHHHHhC-CCEEEEEECCHHHHHHHHHHHHhcCCceEEEECchhhCCCCCCceeEEEEcChHHh
Confidence 578999999999997544 4444 449999999999999999998876667899999999887654 8999999887776
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
.........++++.+.++
T Consensus 102 ~~~~~~~~~l~~~~~~Lk 119 (209)
T 2p8j_A 102 MRKNDVKEAIDEIKRVLK 119 (209)
T ss_dssp SCHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 543344456666666654
No 136
>1qyr_A KSGA, high level kasugamycin resistance protein, S-adenosylMet; adenosine dimethyltransferase, rRNA modification, transferase, translation; 2.10A {Escherichia coli} SCOP: c.66.1.24 PDB: 4adv_V 3tpz_A
Probab=99.40 E-value=3.5e-13 Score=106.28 Aligned_cols=93 Identities=12% Similarity=0.161 Sum_probs=72.9
Q ss_pred cCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCe--EEEEeCChHHHHHHHHHHhhcCCceEEEE
Q 028214 25 QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQ 102 (212)
Q Consensus 25 ~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~--v~~~D~~~~~~~~a~~~~~~~~~~v~~~~ 102 (212)
.|-+.+.+...++..+. ..++++|||+|||+|.++. +.+ + .+ |+++|+|+.+++.++++....+ ++++++
T Consensus 2 nfL~d~~i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~-l~~-~-~~~~v~avEid~~~~~~a~~~~~~~~-~v~~i~ 73 (252)
T 1qyr_A 2 NFLNDQFVIDSIVSAIN----PQKGQAMVEIGPGLAALTE-PVG-E-RLDQLTVIELDRDLAARLQTHPFLGP-KLTIYQ 73 (252)
T ss_dssp CEECCHHHHHHHHHHHC----CCTTCCEEEECCTTTTTHH-HHH-T-TCSCEEEECCCHHHHHHHHTCTTTGG-GEEEEC
T ss_pred CCcCCHHHHHHHHHhcC----CCCcCEEEEECCCCcHHHH-hhh-C-CCCeEEEEECCHHHHHHHHHHhccCC-ceEEEE
Confidence 35566677777665543 3477899999999999999 655 3 36 9999999999999999876432 799999
Q ss_pred cccccCcCCC------cccEEEEcCCCCC
Q 028214 103 CDIRNLEWRG------HVDTVVMNPPFGT 125 (212)
Q Consensus 103 ~d~~~~~~~~------~~D~i~~nppy~~ 125 (212)
+|+.+++... ..|.|++|+||+.
T Consensus 74 ~D~~~~~~~~~~~~~~~~~~vvsNlPY~i 102 (252)
T 1qyr_A 74 QDAMTFNFGELAEKMGQPLRVFGNLPYNI 102 (252)
T ss_dssp SCGGGCCHHHHHHHHTSCEEEEEECCTTT
T ss_pred CchhhCCHHHhhcccCCceEEEECCCCCc
Confidence 9999876432 2479999999975
No 137
>3uzu_A Ribosomal RNA small subunit methyltransferase A; ssgcid, seattle structural genomics center for infectio disease; 1.75A {Burkholderia pseudomallei}
Probab=99.39 E-value=9e-13 Score=105.39 Aligned_cols=98 Identities=12% Similarity=0.186 Sum_probs=76.6
Q ss_pred ccccc-CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCC---eEEEEeCChHHHHHHHHHHhhcCC
Q 028214 21 VELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGAD---QVIAIDIDSDSLELASENAADLEL 96 (212)
Q Consensus 21 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~---~v~~~D~~~~~~~~a~~~~~~~~~ 96 (212)
..+.| |.+.+.+...++..+. ..++.+|||+|||+|.++..++..+.. +|+|+|+|+.+++.++++. ..
T Consensus 18 k~~GQ~fL~d~~i~~~iv~~~~----~~~~~~VLEIG~G~G~lt~~La~~~~~~~~~V~avDid~~~l~~a~~~~---~~ 90 (279)
T 3uzu_A 18 KRFGQNFLVDHGVIDAIVAAIR----PERGERMVEIGPGLGALTGPVIARLATPGSPLHAVELDRDLIGRLEQRF---GE 90 (279)
T ss_dssp CCCSCCEECCHHHHHHHHHHHC----CCTTCEEEEECCTTSTTHHHHHHHHCBTTBCEEEEECCHHHHHHHHHHH---GG
T ss_pred ccCCccccCCHHHHHHHHHhcC----CCCcCEEEEEccccHHHHHHHHHhCCCcCCeEEEEECCHHHHHHHHHhc---CC
Confidence 34444 6777777777665543 347889999999999999999987442 2999999999999999984 22
Q ss_pred ceEEEEcccccCcCCCc-------ccEEEEcCCCCC
Q 028214 97 DIDFVQCDIRNLEWRGH-------VDTVVMNPPFGT 125 (212)
Q Consensus 97 ~v~~~~~d~~~~~~~~~-------~D~i~~nppy~~ 125 (212)
+++++++|+.+++.+.. .+.|++|+||+.
T Consensus 91 ~v~~i~~D~~~~~~~~~~~~~~~~~~~vv~NlPY~i 126 (279)
T 3uzu_A 91 LLELHAGDALTFDFGSIARPGDEPSLRIIGNLPYNI 126 (279)
T ss_dssp GEEEEESCGGGCCGGGGSCSSSSCCEEEEEECCHHH
T ss_pred CcEEEECChhcCChhHhcccccCCceEEEEccCccc
Confidence 79999999999876542 347999999974
No 138
>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1
Probab=99.39 E-value=3.6e-12 Score=103.73 Aligned_cols=83 Identities=18% Similarity=0.145 Sum_probs=70.8
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC-CCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-RGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-~~~~D~i~~n 120 (212)
...++.+|||+|||+|.++..+++.+. .+|+++|+++.+++.|++++...+. ++++.++|+.+... ..+||+|+++
T Consensus 72 ~~~~~~~VLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~Iv~~ 151 (317)
T 1dl5_A 72 GLDKGMRVLEIGGGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVIFVT 151 (317)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEEC
T ss_pred CCCCcCEEEEecCCchHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEEEEc
Confidence 445788999999999999999997643 4699999999999999999988876 79999999988554 3489999999
Q ss_pred CCCCCCC
Q 028214 121 PPFGTRK 127 (212)
Q Consensus 121 ppy~~~~ 127 (212)
+++++..
T Consensus 152 ~~~~~~~ 158 (317)
T 1dl5_A 152 VGVDEVP 158 (317)
T ss_dssp SBBSCCC
T ss_pred CCHHHHH
Confidence 9987653
No 139
>3ocj_A Putative exported protein; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: PLM; 1.39A {Bordetella parapertussis}
Probab=99.39 E-value=9.8e-13 Score=106.40 Aligned_cols=97 Identities=22% Similarity=0.154 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCcChHHHHHH--HcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 47 VSNKVVADFGCGCGTLGAAAT--LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~--~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
.++.+|||+|||+|.++..++ ..+..+|+|+|+++.+++.|++++...+. +++++++|+.+++...+||+|+++.+
T Consensus 117 ~~~~~vLDiGcG~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~ 196 (305)
T 3ocj_A 117 RPGCVVASVPCGWMSELLALDYSACPGVQLVGIDYDPEALDGATRLAAGHALAGQITLHRQDAWKLDTREGYDLLTSNGL 196 (305)
T ss_dssp CTTCEEEETTCTTCHHHHTSCCTTCTTCEEEEEESCHHHHHHHHHHHTTSTTGGGEEEEECCGGGCCCCSCEEEEECCSS
T ss_pred CCCCEEEEecCCCCHHHHHHHHhcCCCCeEEEEECCHHHHHHHHHHHHhcCCCCceEEEECchhcCCccCCeEEEEECCh
Confidence 477899999999999999985 33456999999999999999999988776 59999999999876679999999999
Q ss_pred CCCCCCCc-hHHHHHHHHhhcC
Q 028214 123 FGTRKKGV-DMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~-~~~~l~~~~~~~~ 143 (212)
+++..... ...+++++.+.++
T Consensus 197 ~~~~~~~~~~~~~l~~~~~~Lk 218 (305)
T 3ocj_A 197 NIYEPDDARVTELYRRFWQALK 218 (305)
T ss_dssp GGGCCCHHHHHHHHHHHHHHEE
T ss_pred hhhcCCHHHHHHHHHHHHHhcC
Confidence 98764332 2346777666654
No 140
>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A
Probab=99.39 E-value=6.9e-12 Score=97.36 Aligned_cols=94 Identities=13% Similarity=0.057 Sum_probs=73.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEccccc----CcCCCcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRN----LEWRGHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~----~~~~~~~D~i~~ 119 (212)
...++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.++++++.+ .++.++++|+.+ .+...+||+|+.
T Consensus 71 ~~~~~~~VLDlGcG~G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (230)
T 1fbn_A 71 PIKRDSKILYLGASAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAER-ENIIPILGDANKPQEYANIVEKVDVIYE 149 (230)
T ss_dssp CCCTTCEEEEESCCSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTC-TTEEEEECCTTCGGGGTTTSCCEEEEEE
T ss_pred CCCCCCEEEEEcccCCHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcC-CCeEEEECCCCCcccccccCccEEEEEE
Confidence 3446789999999999999999976 5469999999999999999998765 479999999987 544458999997
Q ss_pred cCCCCCCCCCchHHHHHHHHhhcC
Q 028214 120 NPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
++| ..+....+++++.+.++
T Consensus 150 ~~~----~~~~~~~~l~~~~~~Lk 169 (230)
T 1fbn_A 150 DVA----QPNQAEILIKNAKWFLK 169 (230)
T ss_dssp CCC----STTHHHHHHHHHHHHEE
T ss_pred ecC----ChhHHHHHHHHHHHhCC
Confidence 765 23333455676665554
No 141
>1ri5_A MRNA capping enzyme; methyltransferase, M7G, messenger RNA CAP, structural genomics, PSI, protein structure initiative; 2.10A {Encephalitozoon cuniculi} SCOP: c.66.1.34 PDB: 1ri2_A* 1ri3_A* 1ri1_A* 1ri4_A 1z3c_A* 2hv9_A*
Probab=99.39 E-value=5e-12 Score=101.31 Aligned_cols=104 Identities=16% Similarity=0.094 Sum_probs=81.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC--CCcccEEEEcCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--RGHVDTVVMNPP 122 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~~~~D~i~~npp 122 (212)
.++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.|+++....+. +++++++|+.+.+. ..+||+|+++..
T Consensus 63 ~~~~~vLDiGcG~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~~~~~ 142 (298)
T 1ri5_A 63 KRGDSVLDLGCGKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQFS 142 (298)
T ss_dssp CTTCEEEEETCTTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEESC
T ss_pred CCCCeEEEECCCCCHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCCccEEEEECCccccccCCCCCcCEEEECch
Confidence 46789999999999999998887766999999999999999999987765 68999999998765 238999999988
Q ss_pred CCCC--CCCchHHHHHHHHhhcCceEEEEe
Q 028214 123 FGTR--KKGVDMDFLSMALKVASQAVYSLH 150 (212)
Q Consensus 123 y~~~--~~~~~~~~l~~~~~~~~~~~~~~~ 150 (212)
+++. .......+++++.+.++.+.++++
T Consensus 143 l~~~~~~~~~~~~~l~~~~~~LkpgG~l~~ 172 (298)
T 1ri5_A 143 FHYAFSTSESLDIAQRNIARHLRPGGYFIM 172 (298)
T ss_dssp GGGGGSSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred hhhhcCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 7652 223344677777777654333333
No 142
>3ll7_A Putative methyltransferase; methytransferase, structural genomics, MCSG, PSI-2, protein initiative; HET: MSE; 1.80A {Porphyromonas gingivalis}
Probab=99.39 E-value=4.5e-13 Score=112.07 Aligned_cols=78 Identities=22% Similarity=0.172 Sum_probs=67.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc--CC-ceEEEEcccccCcCC---CcccEEEEcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL--EL-DIDFVQCDIRNLEWR---GHVDTVVMNP 121 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~-~v~~~~~d~~~~~~~---~~~D~i~~np 121 (212)
++.+|||+|||+|..++.+++.+ .+|+++|+|+.+++.|++|++.+ +. +++++++|+.+.... .+||+|++||
T Consensus 93 ~g~~VLDLgcG~G~~al~LA~~g-~~V~~VD~s~~~l~~Ar~N~~~~~~gl~~i~~i~~Da~~~L~~~~~~~fDvV~lDP 171 (410)
T 3ll7_A 93 EGTKVVDLTGGLGIDFIALMSKA-SQGIYIERNDETAVAARHNIPLLLNEGKDVNILTGDFKEYLPLIKTFHPDYIYVDP 171 (410)
T ss_dssp TTCEEEESSCSSSHHHHHHHTTC-SEEEEEESCHHHHHHHHHHHHHHSCTTCEEEEEESCGGGSHHHHHHHCCSEEEECC
T ss_pred CCCEEEEeCCCchHHHHHHHhcC-CEEEEEECCHHHHHHHHHhHHHhccCCCcEEEEECcHHHhhhhccCCCceEEEECC
Confidence 37899999999999999999875 49999999999999999999987 76 899999999986322 2799999999
Q ss_pred CCCCC
Q 028214 122 PFGTR 126 (212)
Q Consensus 122 py~~~ 126 (212)
||...
T Consensus 172 Prr~~ 176 (410)
T 3ll7_A 172 ARRSG 176 (410)
T ss_dssp EEC--
T ss_pred CCcCC
Confidence 99763
No 143
>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A
Probab=99.38 E-value=1.4e-11 Score=96.98 Aligned_cols=111 Identities=21% Similarity=0.299 Sum_probs=82.6
Q ss_pred hHHHHHHHHHHHh-hcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC
Q 028214 30 PHIASRMLYTAEN-SFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (212)
Q Consensus 30 ~~~~~~~l~~~~~-~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (212)
......++..+.. .....++.+|||+|||+|.++..+++.+ .+|+|+|+++.+++.+++++.....+++++++|+.++
T Consensus 20 ~~~~~~~~~~l~~~~~~~~~~~~vLDiG~G~G~~~~~l~~~~-~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~ 98 (263)
T 2yqz_A 20 PEVAGQIATAMASAVHPKGEEPVFLELGVGTGRIALPLIARG-YRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAI 98 (263)
T ss_dssp HHHHHHHHHHHHHHCCCSSSCCEEEEETCTTSTTHHHHHTTT-CEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSC
T ss_pred hHHHHHHHHHHHHhhcCCCCCCEEEEeCCcCCHHHHHHHHCC-CEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccC
Confidence 3444444444422 1123467899999999999999999875 5899999999999999999832223799999999988
Q ss_pred cCCC-cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 109 EWRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 109 ~~~~-~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+... +||+|+++..+++..+ ....++++.+.++
T Consensus 99 ~~~~~~fD~v~~~~~l~~~~~--~~~~l~~~~~~L~ 132 (263)
T 2yqz_A 99 PLPDESVHGVIVVHLWHLVPD--WPKVLAEAIRVLK 132 (263)
T ss_dssp CSCTTCEEEEEEESCGGGCTT--HHHHHHHHHHHEE
T ss_pred CCCCCCeeEEEECCchhhcCC--HHHHHHHHHHHCC
Confidence 7554 8999999999887642 3456666666654
No 144
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=99.38 E-value=2.7e-12 Score=114.42 Aligned_cols=99 Identities=19% Similarity=0.240 Sum_probs=82.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhh------cCC-ceEEEEcccccCcCCC-cccE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAAD------LEL-DIDFVQCDIRNLEWRG-HVDT 116 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~------~~~-~v~~~~~d~~~~~~~~-~~D~ 116 (212)
.++.+|||+|||+|.+++.+++.+. .+|+|+|+++.+++.|++++.. .+. +++++++|+.+++... +||+
T Consensus 720 ~~g~rVLDVGCGTG~lai~LAr~g~p~a~VtGVDIS~emLe~AReRLa~~lnAkr~gl~nVefiqGDa~dLp~~d~sFDl 799 (950)
T 3htx_A 720 SSASTLVDFGCGSGSLLDSLLDYPTSLQTIIGVDISPKGLARAAKMLHVKLNKEACNVKSATLYDGSILEFDSRLHDVDI 799 (950)
T ss_dssp SCCSEEEEETCSSSHHHHHHTSSCCCCCEEEEEESCHHHHHHHHHHHHHHTTTTCSSCSEEEEEESCTTSCCTTSCSCCE
T ss_pred cCCCEEEEECCCCCHHHHHHHHhCCCCCeEEEEECCHHHHHHHHHHhhhccchhhcCCCceEEEECchHhCCcccCCeeE
Confidence 4788999999999999999998752 5999999999999999986653 233 7999999999988765 8999
Q ss_pred EEEcCCCCCCCCCchHHHHHHHHhhcCce
Q 028214 117 VVMNPPFGTRKKGVDMDFLSMALKVASQA 145 (212)
Q Consensus 117 i~~nppy~~~~~~~~~~~l~~~~~~~~~~ 145 (212)
|+++..+++........+++++.+.++.+
T Consensus 800 VV~~eVLeHL~dp~l~~~L~eI~RvLKPG 828 (950)
T 3htx_A 800 GTCLEVIEHMEEDQACEFGEKVLSLFHPK 828 (950)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTTCCS
T ss_pred EEEeCchhhCChHHHHHHHHHHHHHcCCC
Confidence 99999998876555456777877777644
No 145
>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}
Probab=99.38 E-value=5.1e-12 Score=99.30 Aligned_cols=101 Identities=21% Similarity=0.194 Sum_probs=79.9
Q ss_pred HHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCccc
Q 028214 37 LYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVD 115 (212)
Q Consensus 37 l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D 115 (212)
...+...+...++.+|||+|||+|.++..++.. +..+++++|+++.+++.++++.. +++++++|+.+++...+||
T Consensus 22 ~~~l~~~~~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~fD 97 (259)
T 2p35_A 22 ARDLLAQVPLERVLNGYDLGCGPGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLP----NTNFGKADLATWKPAQKAD 97 (259)
T ss_dssp HHHHHTTCCCSCCSSEEEETCTTTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHST----TSEEEECCTTTCCCSSCEE
T ss_pred HHHHHHhcCCCCCCEEEEecCcCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCC----CcEEEECChhhcCccCCcC
Confidence 334445445557789999999999999999976 34589999999999999998832 6899999999887444899
Q ss_pred EEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 116 TVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 116 ~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|+++..+++.. .....++++.+.++
T Consensus 98 ~v~~~~~l~~~~--~~~~~l~~~~~~L~ 123 (259)
T 2p35_A 98 LLYANAVFQWVP--DHLAVLSQLMDQLE 123 (259)
T ss_dssp EEEEESCGGGST--THHHHHHHHGGGEE
T ss_pred EEEEeCchhhCC--CHHHHHHHHHHhcC
Confidence 999999998863 24467777777765
No 146
>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}
Probab=99.38 E-value=3.9e-12 Score=98.31 Aligned_cols=95 Identities=22% Similarity=0.366 Sum_probs=78.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccCcCCC-cccEEEEc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWRG-HVDTVVMN 120 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~~-~~D~i~~n 120 (212)
++.+|||+|||+|.++..++..+. +|+|+|+++.+++.++++....+. ++++.++|+.+++... +||+|+++
T Consensus 30 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~ 108 (235)
T 3sm3_A 30 EDDEILDIGCGSGKISLELASKGY-SVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVENASSLSFHDSSFDFAVMQ 108 (235)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEECCTTSCCSCTTCEEEEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEecccccCCCCCceeEEEEc
Confidence 678999999999999999998855 999999999999999999987765 5899999999887654 89999999
Q ss_pred CCCCCCCCCc-hHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGV-DMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~-~~~~l~~~~~~~~ 143 (212)
.++++..... ...+++++.+.++
T Consensus 109 ~~l~~~~~~~~~~~~l~~~~~~L~ 132 (235)
T 3sm3_A 109 AFLTSVPDPKERSRIIKEVFRVLK 132 (235)
T ss_dssp SCGGGCCCHHHHHHHHHHHHHHEE
T ss_pred chhhcCCCHHHHHHHHHHHHHHcC
Confidence 9988774322 2356676666654
No 147
>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7
Probab=99.37 E-value=9.2e-12 Score=96.41 Aligned_cols=80 Identities=20% Similarity=0.156 Sum_probs=68.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC-CCcccEEEEcCCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-RGHVDTVVMNPPF 123 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-~~~~D~i~~nppy 123 (212)
...++.+|||+|||+|.++..++..+ .+|+++|+++.+++.++++....+ +++++++|+.+... ..+||+|+++.++
T Consensus 67 ~~~~~~~vLdiG~G~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~-~v~~~~~d~~~~~~~~~~fD~v~~~~~~ 144 (231)
T 1vbf_A 67 DLHKGQKVLEIGTGIGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYN-NIKLILGDGTLGYEEEKPYDRVVVWATA 144 (231)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCS-SEEEEESCGGGCCGGGCCEEEEEESSBB
T ss_pred CCCCCCEEEEEcCCCCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcC-CeEEEECCcccccccCCCccEEEECCcH
Confidence 34577899999999999999999876 699999999999999999998777 89999999987333 3489999999887
Q ss_pred CCC
Q 028214 124 GTR 126 (212)
Q Consensus 124 ~~~ 126 (212)
++.
T Consensus 145 ~~~ 147 (231)
T 1vbf_A 145 PTL 147 (231)
T ss_dssp SSC
T ss_pred HHH
Confidence 654
No 148
>3mgg_A Methyltransferase; NYSGXRC, PSI-II, protein structure initiative, structural genomics, NEW YORK SGX research center for structural genomics; 1.86A {Methanosarcina mazei}
Probab=99.37 E-value=8.9e-12 Score=99.03 Aligned_cols=95 Identities=23% Similarity=0.331 Sum_probs=79.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
.++.+|||+|||+|.++..+++.+ ..+|+|+|+++.+++.+++++...+. +++++++|+.+++... +||+|+++..+
T Consensus 36 ~~~~~vLDiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l 115 (276)
T 3mgg_A 36 PPGAKVLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKNVKFLQANIFSLPFEDSSFDHIFVCFVL 115 (276)
T ss_dssp CTTCEEEETTCTTSHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGCCSCTTCEEEEEEESCG
T ss_pred CCCCeEEEecCCCCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEcccccCCCCCCCeeEEEEechh
Confidence 477899999999999999999774 46999999999999999999988876 7999999999987654 89999999998
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++..+ ...+++++.+.++
T Consensus 116 ~~~~~--~~~~l~~~~~~L~ 133 (276)
T 3mgg_A 116 EHLQS--PEEALKSLKKVLK 133 (276)
T ss_dssp GGCSC--HHHHHHHHHHHEE
T ss_pred hhcCC--HHHHHHHHHHHcC
Confidence 87643 2356666666654
No 149
>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}
Probab=99.37 E-value=1e-11 Score=96.60 Aligned_cols=95 Identities=20% Similarity=0.275 Sum_probs=78.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPF 123 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy 123 (212)
...++.+|||+|||+|.++..+++.+..+|+|+|+++.+++.++++.... +++++++|+.+.+... +||+|+++.++
T Consensus 40 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l 117 (243)
T 3bkw_A 40 PEVGGLRIVDLGCGFGWFCRWAHEHGASYVLGLDLSEKMLARARAAGPDT--GITYERADLDKLHLPQDSFDLAYSSLAL 117 (243)
T ss_dssp CCCTTCEEEEETCTTCHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCSS--SEEEEECCGGGCCCCTTCEEEEEEESCG
T ss_pred cccCCCEEEEEcCcCCHHHHHHHHCCCCeEEEEcCCHHHHHHHHHhcccC--CceEEEcChhhccCCCCCceEEEEeccc
Confidence 34578899999999999999999876559999999999999999987654 6899999999877544 89999999988
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++.. .....++++.+.++
T Consensus 118 ~~~~--~~~~~l~~~~~~L~ 135 (243)
T 3bkw_A 118 HYVE--DVARLFRTVHQALS 135 (243)
T ss_dssp GGCS--CHHHHHHHHHHHEE
T ss_pred cccc--hHHHHHHHHHHhcC
Confidence 7763 34466777666654
No 150
>3d2l_A SAM-dependent methyltransferase; ZP_00538691.1, structural G joint center for structural genomics, JCSG; HET: MSE; 1.90A {Exiguobacterium sibiricum 255-15}
Probab=99.37 E-value=4.3e-12 Score=98.74 Aligned_cols=94 Identities=26% Similarity=0.365 Sum_probs=76.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcC-CCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNP-PFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~np-py~~~ 126 (212)
++.+|||+|||+|.++..+++. .+++|+|+++.+++.|+++....+.+++++++|+.+.+...+||+|+++. ++++.
T Consensus 33 ~~~~vLdiG~G~G~~~~~l~~~--~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~fD~v~~~~~~~~~~ 110 (243)
T 3d2l_A 33 PGKRIADIGCGTGTATLLLADH--YEVTGVDLSEEMLEIAQEKAMETNRHVDFWVQDMRELELPEPVDAITILCDSLNYL 110 (243)
T ss_dssp TTCEEEEESCTTCHHHHHHTTT--SEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCGGGCCCSSCEEEEEECTTGGGGC
T ss_pred CCCeEEEecCCCCHHHHHHhhC--CeEEEEECCHHHHHHHHHhhhhcCCceEEEEcChhhcCCCCCcCEEEEeCCchhhc
Confidence 4689999999999999999986 59999999999999999999877667999999999887666899999986 66655
Q ss_pred CC-CchHHHHHHHHhhcC
Q 028214 127 KK-GVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~-~~~~~~l~~~~~~~~ 143 (212)
.. ......++++.+.++
T Consensus 111 ~~~~~~~~~l~~~~~~L~ 128 (243)
T 3d2l_A 111 QTEADVKQTFDSAARLLT 128 (243)
T ss_dssp CSHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 22 333456677666654
No 151
>3g07_A 7SK snRNA methylphosphate capping enzyme; structural genomics consortium (SGC), methyltransferase, phosphoprotein, S-adenosyl-L-methionine; HET: SAM; 2.65A {Homo sapiens}
Probab=99.37 E-value=1.7e-12 Score=104.48 Aligned_cols=105 Identities=16% Similarity=0.141 Sum_probs=76.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcC-------------------------------
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLE------------------------------- 95 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~------------------------------- 95 (212)
++++|||+|||+|.+++.++.. +..+|+|+|+|+.+++.|++++...+
T Consensus 46 ~~~~VLDiGCG~G~~~~~la~~~~~~~v~gvDis~~~i~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 125 (292)
T 3g07_A 46 RGRDVLDLGCNVGHLTLSIACKWGPSRMVGLDIDSRLIHSARQNIRHYLSEELRLPPQTLEGDPGAEGEEGTTTVRKRSC 125 (292)
T ss_dssp TTSEEEEESCTTCHHHHHHHHHTCCSEEEEEESCHHHHHHHHHTC-----------------------------------
T ss_pred CCCcEEEeCCCCCHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhhhhhcccccccccccccccccccccccccccc
Confidence 6789999999999999999976 55699999999999999999876532
Q ss_pred ----------------------------CceEEEEcccccCc------CCCcccEEEEcCCCCCC----CCCchHHHHHH
Q 028214 96 ----------------------------LDIDFVQCDIRNLE------WRGHVDTVVMNPPFGTR----KKGVDMDFLSM 137 (212)
Q Consensus 96 ----------------------------~~v~~~~~d~~~~~------~~~~~D~i~~nppy~~~----~~~~~~~~l~~ 137 (212)
.+++++++|+.... ...+||+|++....++. .......++++
T Consensus 126 ~p~~~~~~~g~~~~p~~~~~~~~~~~~p~~v~f~~~d~~~~~~~~~~~~~~~fD~I~~~~vl~~ihl~~~~~~~~~~l~~ 205 (292)
T 3g07_A 126 FPASLTASRGPIAAPQVPLDGADTSVFPNNVVFVTGNYVLDRDDLVEAQTPEYDVVLCLSLTKWVHLNWGDEGLKRMFRR 205 (292)
T ss_dssp ----------------CCSSTTCCSSTTTTEEEEECCCCCSSHHHHTTCCCCEEEEEEESCHHHHHHHHHHHHHHHHHHH
T ss_pred ccchhhhccCccccccccccccccccccccceEEecccccCccccccccCCCcCEEEEChHHHHhhhcCCHHHHHHHHHH
Confidence 26999999998654 23489999998776432 12233456777
Q ss_pred HHhhcCceEEEEecC
Q 028214 138 ALKVASQAVYSLHKT 152 (212)
Q Consensus 138 ~~~~~~~~~~~~~~~ 152 (212)
+.+.++.+.++++.+
T Consensus 206 ~~~~LkpGG~lil~~ 220 (292)
T 3g07_A 206 IYRHLRPGGILVLEP 220 (292)
T ss_dssp HHHHEEEEEEEEEEC
T ss_pred HHHHhCCCcEEEEec
Confidence 777766444444443
No 152
>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38
Probab=99.37 E-value=7.5e-12 Score=101.84 Aligned_cols=81 Identities=16% Similarity=0.251 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC-CCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-RGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-~~~~D~i~~n 120 (212)
...++.+|||+|||+|..+..++.. +..+|+|+|+++.+++.+++|++.++. +++++++|+.+++. ..+||+|++|
T Consensus 115 ~~~~g~~VLDlg~G~G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d 194 (315)
T 1ixk_A 115 DPKPGEIVADMAAAPGGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD 194 (315)
T ss_dssp CCCTTCEEEECCSSCSHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred CCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence 3457889999999999999999965 246899999999999999999998887 89999999998764 3389999999
Q ss_pred CCCCC
Q 028214 121 PPFGT 125 (212)
Q Consensus 121 ppy~~ 125 (212)
||+..
T Consensus 195 ~Pcsg 199 (315)
T 1ixk_A 195 APCTG 199 (315)
T ss_dssp CCTTS
T ss_pred CCCCC
Confidence 99753
No 153
>3axs_A Probable N(2),N(2)-dimethylguanosine tRNA methylt TRM1; structural genomics, riken structural genomics/proteomics in RSGI; HET: SFG; 2.16A {Aquifex aeolicus} PDB: 3axt_A*
Probab=99.37 E-value=2.4e-12 Score=107.40 Aligned_cols=98 Identities=18% Similarity=0.149 Sum_probs=79.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-c--eEEEEcccccCcC-C--CcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-D--IDFVQCDIRNLEW-R--GHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~--v~~~~~d~~~~~~-~--~~~D~i~~ 119 (212)
++.+|||++||+|.+++.+++. ++.+|+++|+|+.+++.+++|++.+++ + ++++++|+.++.. . .+||+|++
T Consensus 52 ~g~~VLDlfaGtG~~sl~aa~~~~ga~~V~avDi~~~av~~~~~N~~~Ngl~~~~v~v~~~Da~~~l~~~~~~~fD~V~l 131 (392)
T 3axs_A 52 RPVKVADPLSASGIRAIRFLLETSCVEKAYANDISSKAIEIMKENFKLNNIPEDRYEIHGMEANFFLRKEWGFGFDYVDL 131 (392)
T ss_dssp SCEEEEESSCTTSHHHHHHHHHCSCEEEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHHHSCCSSCEEEEEE
T ss_pred CCCEEEECCCcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHhCCCCceEEEEeCCHHHHHHHhhCCCCcEEEE
Confidence 5789999999999999999974 446899999999999999999999998 4 9999999987654 2 37999999
Q ss_pred cCCCCCCCCCchHHHHHHHHhhcC--ceEEEEec
Q 028214 120 NPPFGTRKKGVDMDFLSMALKVAS--QAVYSLHK 151 (212)
Q Consensus 120 nppy~~~~~~~~~~~l~~~~~~~~--~~~~~~~~ 151 (212)
|| |. ....+++.+.+..+ +.+|+++.
T Consensus 132 DP-~g-----~~~~~l~~a~~~Lk~gGll~~t~t 159 (392)
T 3axs_A 132 DP-FG-----TPVPFIESVALSMKRGGILSLTAT 159 (392)
T ss_dssp CC-SS-----CCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred CC-Cc-----CHHHHHHHHHHHhCCCCEEEEEec
Confidence 99 32 23457777776543 46666663
No 154
>3g2m_A PCZA361.24; SAM-dependent methyltransferase, glycopeptide antibiotics biosynthesis, structural genomics; 2.00A {Amycolatopsis orientalis} PDB: 3g2o_A* 3g2p_A* 3g2q_A*
Probab=99.37 E-value=2.4e-12 Score=103.76 Aligned_cols=95 Identities=17% Similarity=0.184 Sum_probs=75.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC----CceEEEEcccccCcCCCcccEEEEc-CC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----LDIDFVQCDIRNLEWRGHVDTVVMN-PP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~~~~D~i~~n-pp 122 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|++++...+ .+++++++|+.+++...+||+|++. ..
T Consensus 82 ~~~~vLDlGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~fD~v~~~~~~ 160 (299)
T 3g2m_A 82 VSGPVLELAAGMGRLTFPFLDLGW-EVTALELSTSVLAAFRKRLAEAPADVRDRCTLVQGDMSAFALDKRFGTVVISSGS 160 (299)
T ss_dssp CCSCEEEETCTTTTTHHHHHTTTC-CEEEEESCHHHHHHHHHHHHTSCHHHHTTEEEEECBTTBCCCSCCEEEEEECHHH
T ss_pred CCCcEEEEeccCCHHHHHHHHcCC-eEEEEECCHHHHHHHHHHHhhcccccccceEEEeCchhcCCcCCCcCEEEECCcc
Confidence 445999999999999999998754 89999999999999999998765 4799999999998876699988864 44
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++........+++++.+.++
T Consensus 161 ~~~~~~~~~~~~l~~~~~~L~ 181 (299)
T 3g2m_A 161 INELDEADRRGLYASVREHLE 181 (299)
T ss_dssp HTTSCHHHHHHHHHHHHHHEE
T ss_pred cccCCHHHHHHHHHHHHHHcC
Confidence 554433334566776666654
No 155
>1yub_A Ermam, rRNA methyltransferase; MLS antibiotics; NMR {Streptococcus pneumoniae} SCOP: c.66.1.24
Probab=99.37 E-value=8.5e-14 Score=109.38 Aligned_cols=99 Identities=20% Similarity=0.349 Sum_probs=78.8
Q ss_pred ccccc-CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceE
Q 028214 21 VELEQ-YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDID 99 (212)
Q Consensus 21 ~~~~~-~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~ 99 (212)
..+.| |.+.+.+...++..+ ...++.+|||+|||+|.++..++..+ .+|+|+|+|+.+++.++++... ..+++
T Consensus 5 k~~gq~fl~~~~~~~~i~~~~----~~~~~~~VLDiG~G~G~~~~~l~~~~-~~v~~id~~~~~~~~a~~~~~~-~~~v~ 78 (245)
T 1yub_A 5 IKYSQNFLTSEKVLNQIIKQL----NLKETDTVYEIGTGKGHLTTKLAKIS-KQVTSIELDSHLFNLSSEKLKL-NTRVT 78 (245)
T ss_dssp CCSCCCBCCCTTTHHHHHHHC----CCCSSEEEEECSCCCSSCSHHHHHHS-SEEEESSSSCSSSSSSSCTTTT-CSEEE
T ss_pred cccCCCCCCCHHHHHHHHHhc----CCCCCCEEEEEeCCCCHHHHHHHHhC-CeEEEEECCHHHHHHHHHHhcc-CCceE
Confidence 34555 677777776666443 33477899999999999999999876 6999999999999999888762 22799
Q ss_pred EEEcccccCcCC--CcccEEEEcCCCCCC
Q 028214 100 FVQCDIRNLEWR--GHVDTVVMNPPFGTR 126 (212)
Q Consensus 100 ~~~~d~~~~~~~--~~~D~i~~nppy~~~ 126 (212)
++++|+.+++.. .+| .|++||||+..
T Consensus 79 ~~~~D~~~~~~~~~~~f-~vv~n~Py~~~ 106 (245)
T 1yub_A 79 LIHQDILQFQFPNKQRY-KIVGNIPYHLS 106 (245)
T ss_dssp ECCSCCTTTTCCCSSEE-EEEEECCSSSC
T ss_pred EEECChhhcCcccCCCc-EEEEeCCcccc
Confidence 999999998755 378 89999999864
No 156
>2dul_A N(2),N(2)-dimethylguanosine tRNA methyltransferas; tRNA modification enzyme, guanine 26, N(2),N(2)-dimethyltran structural genomics; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.58 PDB: 2ejt_A* 2eju_A* 2ytz_A*
Probab=99.36 E-value=4.5e-12 Score=105.52 Aligned_cols=97 Identities=25% Similarity=0.188 Sum_probs=79.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc---------------CC-ceEEEEcccccCcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL---------------EL-DIDFVQCDIRNLEW 110 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~---------------~~-~v~~~~~d~~~~~~ 110 (212)
++.+|||+|||+|.+++.+++. +..+|+++|+|+.+++.+++|++.+ +. +++++++|+.++..
T Consensus 47 ~~~~VLDl~aGtG~~~l~~a~~~~~~~V~avDi~~~av~~a~~N~~~n~~~~~~~~~~~~~~~gl~~i~v~~~Da~~~~~ 126 (378)
T 2dul_A 47 NPKIVLDALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMA 126 (378)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHH
T ss_pred CCCEEEECCCchhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHHHHhcccccccccccccccCCCceEEEcCcHHHHHH
Confidence 6789999999999999999976 5568999999999999999999998 76 59999999987653
Q ss_pred C--CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC--ceEEEEe
Q 028214 111 R--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS--QAVYSLH 150 (212)
Q Consensus 111 ~--~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~--~~~~~~~ 150 (212)
. .+||+|+.|||+. ...+++.+.+..+ +.+|+.+
T Consensus 127 ~~~~~fD~I~lDP~~~------~~~~l~~a~~~lk~gG~l~vt~ 164 (378)
T 2dul_A 127 ERHRYFHFIDLDPFGS------PMEFLDTALRSAKRRGILGVTA 164 (378)
T ss_dssp HSTTCEEEEEECCSSC------CHHHHHHHHHHEEEEEEEEEEE
T ss_pred hccCCCCEEEeCCCCC------HHHHHHHHHHhcCCCCEEEEEe
Confidence 2 3799999998743 3567777776654 3555555
No 157
>3c3p_A Methyltransferase; NP_951602.1, structural genomics, joint for structural genomics, JCSG, protein structure initiative transferase; 1.90A {Geobacter sulfurreducens pca}
Probab=99.36 E-value=7.5e-12 Score=95.69 Aligned_cols=133 Identities=20% Similarity=0.201 Sum_probs=93.2
Q ss_pred chHHHHHHhccCCCCCCcc-cccc------cCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CC
Q 028214 2 KLKQLESVLGDLEQFSNPK-VELE------QYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-AD 72 (212)
Q Consensus 2 ~~~~l~~~~~~l~~~~~~~-~~~~------~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~ 72 (212)
..+.+++++.+......+. ...+ .++........++...... .++.+|||+|||+|..++.+++. + ..
T Consensus 6 ~~~~~~~y~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~ 82 (210)
T 3c3p_A 6 VDSRIGAYLDGLLPEADPVVAAMEQIARERNIPIVDRQTGRLLYLLARI---KQPQLVVVPGDGLGCASWWFARAISISS 82 (210)
T ss_dssp BCHHHHHHHHHTSCSCCHHHHHHHHHHHHTTCCCCCHHHHHHHHHHHHH---HCCSEEEEESCGGGHHHHHHHTTSCTTC
T ss_pred hHHHHHHHHHHhcCCCCHHHHHHHHHHHHcCCCCcCHHHHHHHHHHHHh---hCCCEEEEEcCCccHHHHHHHHhCCCCC
Confidence 4566777776655433321 1111 1344445555555554433 25689999999999999999975 2 46
Q ss_pred eEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC--CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 73 QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW--RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 73 ~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~--~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|+++|+++.+++.|+++++..+. +++++++|+.+... .. ||+|+++.+ ......+++.+.+.++
T Consensus 83 ~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~-fD~v~~~~~-----~~~~~~~l~~~~~~Lk 151 (210)
T 3c3p_A 83 RVVMIDPDRDNVEHARRMLHDNGLIDRVELQVGDPLGIAAGQRD-IDILFMDCD-----VFNGADVLERMNRCLA 151 (210)
T ss_dssp EEEEEESCHHHHHHHHHHHHHHSGGGGEEEEESCHHHHHTTCCS-EEEEEEETT-----TSCHHHHHHHHGGGEE
T ss_pred EEEEEECCHHHHHHHHHHHHHCCCCceEEEEEecHHHHhccCCC-CCEEEEcCC-----hhhhHHHHHHHHHhcC
Confidence 999999999999999999988776 69999999976522 34 999999865 2344567777776665
No 158
>2p7i_A Hypothetical protein; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; 1.74A {Pectobacterium atrosepticum SCRI1043} SCOP: c.66.1.41 PDB: 2p7h_A
Probab=99.36 E-value=4.3e-12 Score=98.82 Aligned_cols=91 Identities=9% Similarity=0.152 Sum_probs=76.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++... +++++++|+.+.....+||+|+++-.+++.
T Consensus 41 ~~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~~---~v~~~~~d~~~~~~~~~fD~v~~~~~l~~~ 116 (250)
T 2p7i_A 41 FRPGNLLELGSFKGDFTSRLQEHFN-DITCVEASEEAISHAQGRLKD---GITYIHSRFEDAQLPRRYDNIVLTHVLEHI 116 (250)
T ss_dssp CCSSCEEEESCTTSHHHHHHTTTCS-CEEEEESCHHHHHHHHHHSCS---CEEEEESCGGGCCCSSCEEEEEEESCGGGC
T ss_pred cCCCcEEEECCCCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhhhC---CeEEEEccHHHcCcCCcccEEEEhhHHHhh
Confidence 3677899999999999999998765 899999999999999998764 689999999988554589999999888776
Q ss_pred CCCchHHHHHHHH-hhcC
Q 028214 127 KKGVDMDFLSMAL-KVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~-~~~~ 143 (212)
.+ ....++++. +.++
T Consensus 117 ~~--~~~~l~~~~~~~Lk 132 (250)
T 2p7i_A 117 DD--PVALLKRINDDWLA 132 (250)
T ss_dssp SS--HHHHHHHHHHTTEE
T ss_pred cC--HHHHHHHHHHHhcC
Confidence 42 356777777 6664
No 159
>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}
Probab=99.36 E-value=2.9e-12 Score=97.92 Aligned_cols=90 Identities=18% Similarity=0.147 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTRK 127 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~~ 127 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++. ++++.++|+.+++...+||+|+++..+++..
T Consensus 43 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~fD~v~~~~~l~~~~ 116 (211)
T 3e23_A 43 AGAKILELGCGAGYQAEAMLAAGF-DVDATDGSPELAAEASRRL-----GRPVRTMLFHQLDAIDAYDAVWAHACLLHVP 116 (211)
T ss_dssp TTCEEEESSCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH-----TSCCEECCGGGCCCCSCEEEEEECSCGGGSC
T ss_pred CCCcEEEECCCCCHHHHHHHHcCC-eEEEECCCHHHHHHHHHhc-----CCceEEeeeccCCCCCcEEEEEecCchhhcC
Confidence 578999999999999999998755 9999999999999999987 4678899999888555999999999988775
Q ss_pred CCchHHHHHHHHhhcC
Q 028214 128 KGVDMDFLSMALKVAS 143 (212)
Q Consensus 128 ~~~~~~~l~~~~~~~~ 143 (212)
......+++++.+.++
T Consensus 117 ~~~~~~~l~~~~~~Lk 132 (211)
T 3e23_A 117 RDELADVLKLIWRALK 132 (211)
T ss_dssp HHHHHHHHHHHHHHEE
T ss_pred HHHHHHHHHHHHHhcC
Confidence 4444567777776654
No 160
>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}
Probab=99.36 E-value=5.9e-11 Score=92.67 Aligned_cols=77 Identities=22% Similarity=0.340 Sum_probs=67.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCc-CCCcccEEEEcC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE-WRGHVDTVVMNP 121 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~-~~~~~D~i~~np 121 (212)
...++.+|||+|||+|.++..+++. ..+|+++|+++.+++.|+++....+. ++++.++|+.+.. ....||+|++|+
T Consensus 88 ~~~~~~~vldiG~G~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v~~~~ 166 (248)
T 2yvl_A 88 NLNKEKRVLEFGTGSGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNVDFKDAEVPEGIFHAAFVDV 166 (248)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECSCTTTSCCCTTCBSEEEECS
T ss_pred CCCCCCEEEEeCCCccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEcChhhcccCCCcccEEEECC
Confidence 3357889999999999999999987 56999999999999999999988775 7999999998876 444899999998
Q ss_pred C
Q 028214 122 P 122 (212)
Q Consensus 122 p 122 (212)
|
T Consensus 167 ~ 167 (248)
T 2yvl_A 167 R 167 (248)
T ss_dssp S
T ss_pred c
Confidence 7
No 161
>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0
Probab=99.36 E-value=1.2e-11 Score=95.40 Aligned_cols=103 Identities=19% Similarity=0.160 Sum_probs=79.1
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccC
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (212)
...++...... .++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. +++++++|+.+.
T Consensus 52 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 128 (225)
T 3tr6_A 52 QAQLLALLVKL---MQAKKVIDIGTFTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDT 128 (225)
T ss_dssp HHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHH
T ss_pred HHHHHHHHHHh---hCCCEEEEeCCcchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHH
Confidence 34444444433 26789999999999999999975 2 56999999999999999999998876 599999999765
Q ss_pred cCC-------CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 109 EWR-------GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 109 ~~~-------~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
... .+||+|+++++. .....+++.+.+.++
T Consensus 129 ~~~~~~~~~~~~fD~v~~~~~~-----~~~~~~l~~~~~~L~ 165 (225)
T 3tr6_A 129 LAELIHAGQAWQYDLIYIDADK-----ANTDLYYEESLKLLR 165 (225)
T ss_dssp HHHHHTTTCTTCEEEEEECSCG-----GGHHHHHHHHHHHEE
T ss_pred HHHhhhccCCCCccEEEECCCH-----HHHHHHHHHHHHhcC
Confidence 321 489999999872 234556777766655
No 162
>3ege_A Putative methyltransferase from antibiotic biosyn pathway; YP_324569.1, putative methyltransferase from antibiotic BIOS pathway; 2.40A {Anabaena variabilis atcc 29413}
Probab=99.35 E-value=2.4e-12 Score=101.77 Aligned_cols=90 Identities=18% Similarity=0.130 Sum_probs=72.2
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCC
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFG 124 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~ 124 (212)
..++.+|||+|||+|..+..+++.+ .+|+|+|+++.+++.++++. +++++++|+.+++.+. +||+|+++..++
T Consensus 32 ~~~~~~vLDiGcG~G~~~~~l~~~~-~~v~gvD~s~~~~~~a~~~~-----~~~~~~~d~~~~~~~~~~fD~v~~~~~l~ 105 (261)
T 3ege_A 32 LPKGSVIADIGAGTGGYSVALANQG-LFVYAVEPSIVMRQQAVVHP-----QVEWFTGYAENLALPDKSVDGVISILAIH 105 (261)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHTTT-CEEEEECSCHHHHHSSCCCT-----TEEEECCCTTSCCSCTTCBSEEEEESCGG
T ss_pred CCCCCEEEEEcCcccHHHHHHHhCC-CEEEEEeCCHHHHHHHHhcc-----CCEEEECchhhCCCCCCCEeEEEEcchHh
Confidence 3478899999999999999999854 59999999999998887765 6999999999987654 899999999887
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
+.. .....++++.+.++
T Consensus 106 ~~~--~~~~~l~~~~~~Lk 122 (261)
T 3ege_A 106 HFS--HLEKSFQEMQRIIR 122 (261)
T ss_dssp GCS--SHHHHHHHHHHHBC
T ss_pred hcc--CHHHHHHHHHHHhC
Confidence 762 23345555554433
No 163
>3khk_A Type I restriction-modification system methylation subunit; structural genomics, PSI-2, protein structure initiative; 2.55A {Methanosarcina mazei}
Probab=99.35 E-value=3.4e-12 Score=110.85 Aligned_cols=100 Identities=20% Similarity=0.157 Sum_probs=78.5
Q ss_pred cccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc--------C--------CCeEEEEeCChHHH
Q 028214 21 VELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--------G--------ADQVIAIDIDSDSL 84 (212)
Q Consensus 21 ~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~--------~--------~~~v~~~D~~~~~~ 84 (212)
....+|.||+.++..|+..+.. .++ +|+|++||||.+.+.+++. . ...++|+|+++.++
T Consensus 222 k~~G~fyTP~~Vv~lmv~ll~p----~~~-~VlDPaCGSG~fLi~a~~~l~~~~~~~~~~~~~~~~~~~i~G~Eid~~~~ 296 (544)
T 3khk_A 222 KQGGQYYTPKSIVTLIVEMLEP----YKG-RVYDPAMGSGGFFVSSDKFIEKHANVKHYNASEQKKQISVYGQESNPTTW 296 (544)
T ss_dssp CCSTTTCCCHHHHHHHHHHHCC----CSE-EEEESSCTTCHHHHHHHHHHHHHHHHHTSCHHHHGGGEEEEECCCCHHHH
T ss_pred ccCCeEeCCHHHHHHHHHHHhc----CCC-eEeCcccCcCcHHHHHHHHHHHhccccccchHHHhhhceEEEEeCCHHHH
Confidence 4567899999888877765432 233 9999999999998887642 0 34799999999999
Q ss_pred HHHHHHHhhcCC--ceEEEEcccccCcCC--CcccEEEEcCCCCC
Q 028214 85 ELASENAADLEL--DIDFVQCDIRNLEWR--GHVDTVVMNPPFGT 125 (212)
Q Consensus 85 ~~a~~~~~~~~~--~v~~~~~d~~~~~~~--~~~D~i~~nppy~~ 125 (212)
+.|+.|+...+. ++.+.++|.+..+.. .+||+|++||||..
T Consensus 297 ~lA~~Nl~l~gi~~~i~i~~gDtL~~~~~~~~~fD~Iv~NPPf~~ 341 (544)
T 3khk_A 297 KLAAMNMVIRGIDFNFGKKNADSFLDDQHPDLRADFVMTNPPFNM 341 (544)
T ss_dssp HHHHHHHHHTTCCCBCCSSSCCTTTSCSCTTCCEEEEEECCCSSC
T ss_pred HHHHHHHHHhCCCcccceeccchhcCcccccccccEEEECCCcCC
Confidence 999999988876 334488998766532 38999999999985
No 164
>2ipx_A RRNA 2'-O-methyltransferase fibrillarin; FBL, structural genomics, structural genomics consortium, SGC; HET: MTA; 1.82A {Homo sapiens}
Probab=99.35 E-value=1.2e-11 Score=96.17 Aligned_cols=103 Identities=16% Similarity=-0.005 Sum_probs=74.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc---C-CCcccEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---W-RGHVDTVV 118 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~---~-~~~~D~i~ 118 (212)
...++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.+.++++.+ .+++++++|+.+.. . ..+||+|+
T Consensus 74 ~~~~~~~vLDlG~G~G~~~~~la~~~g~~~~v~gvD~s~~~i~~~~~~a~~~-~~v~~~~~d~~~~~~~~~~~~~~D~V~ 152 (233)
T 2ipx_A 74 HIKPGAKVLYLGAASGTTVSHVSDIVGPDGLVYAVEFSHRSGRDLINLAKKR-TNIIPVIEDARHPHKYRMLIAMVDVIF 152 (233)
T ss_dssp CCCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHC-TTEEEECSCTTCGGGGGGGCCCEEEEE
T ss_pred cCCCCCEEEEEcccCCHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHhhcc-CCeEEEEcccCChhhhcccCCcEEEEE
Confidence 3456789999999999999999976 3469999999999888887777765 37999999998742 2 23899999
Q ss_pred EcCCCCCCCCCchHHHHHHHHhhcC--ceEEEEecC
Q 028214 119 MNPPFGTRKKGVDMDFLSMALKVAS--QAVYSLHKT 152 (212)
Q Consensus 119 ~nppy~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~ 152 (212)
+|+| .......++.++.+.++ +.+++.+.+
T Consensus 153 ~~~~----~~~~~~~~~~~~~~~LkpgG~l~i~~~~ 184 (233)
T 2ipx_A 153 ADVA----QPDQTRIVALNAHTFLRNGGHFVISIKA 184 (233)
T ss_dssp ECCC----CTTHHHHHHHHHHHHEEEEEEEEEEEEH
T ss_pred EcCC----CccHHHHHHHHHHHHcCCCeEEEEEEcc
Confidence 9998 22233334555555543 244444443
No 165
>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}
Probab=99.35 E-value=1.6e-11 Score=94.00 Aligned_cols=82 Identities=16% Similarity=0.086 Sum_probs=68.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC-CCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW-RGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~-~~~~D~i~~n 120 (212)
...++.+|||+|||+|.++..+++... .+|+++|+++.+++.+++++...+. ++++.++|+..... ..+||+|+++
T Consensus 74 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~v~~~ 153 (215)
T 2yxe_A 74 DLKPGMKVLEIGTGCGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGYEPLAPYDRIYTT 153 (215)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCCGGGCCEEEEEES
T ss_pred CCCCCCEEEEECCCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCCCCCCCeeEEEEC
Confidence 345788999999999999999997642 6999999999999999999987776 79999999865443 3389999999
Q ss_pred CCCCCC
Q 028214 121 PPFGTR 126 (212)
Q Consensus 121 ppy~~~ 126 (212)
.++++.
T Consensus 154 ~~~~~~ 159 (215)
T 2yxe_A 154 AAGPKI 159 (215)
T ss_dssp SBBSSC
T ss_pred CchHHH
Confidence 887654
No 166
>3pfg_A N-methyltransferase; N,N-dimethyltransferase, SAM binding, DTDP-linked sugar BIND transferase; HET: SAM TLO; 1.35A {Streptomyces fradiae} PDB: 3pfh_A* 3px3_A* 3px2_A*
Probab=99.35 E-value=1.1e-11 Score=97.91 Aligned_cols=92 Identities=15% Similarity=0.120 Sum_probs=75.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcC-CCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNP-PFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~np-py~~~ 126 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++.. +++++++|+.+++...+||+|+++. ++++.
T Consensus 50 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~fD~v~~~~~~l~~~ 124 (263)
T 3pfg_A 50 KAASLLDVACGTGMHLRHLADSFG-TVEGLELSADMLAIARRRNP----DAVLHHGDMRDFSLGRRFSAVTCMFSSIGHL 124 (263)
T ss_dssp TCCEEEEETCTTSHHHHHHTTTSS-EEEEEESCHHHHHHHHHHCT----TSEEEECCTTTCCCSCCEEEEEECTTGGGGS
T ss_pred CCCcEEEeCCcCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhCC----CCEEEECChHHCCccCCcCEEEEcCchhhhc
Confidence 568999999999999999998755 89999999999999999865 6899999999987766999999987 77765
Q ss_pred CC-CchHHHHHHHHhhcCc
Q 028214 127 KK-GVDMDFLSMALKVASQ 144 (212)
Q Consensus 127 ~~-~~~~~~l~~~~~~~~~ 144 (212)
.. .....+++++.+.++.
T Consensus 125 ~~~~~~~~~l~~~~~~L~p 143 (263)
T 3pfg_A 125 AGQAELDAALERFAAHVLP 143 (263)
T ss_dssp CHHHHHHHHHHHHHHTEEE
T ss_pred CCHHHHHHHHHHHHHhcCC
Confidence 32 2333566666666553
No 167
>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13
Probab=99.34 E-value=2.4e-11 Score=96.77 Aligned_cols=78 Identities=26% Similarity=0.298 Sum_probs=67.2
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhc-C--C-ceEEEEcccccCcCCC-cccEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADL-E--L-DIDFVQCDIRNLEWRG-HVDTV 117 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~-~--~-~v~~~~~d~~~~~~~~-~~D~i 117 (212)
...++.+|||+|||+|.++..+++. + ..+|+++|+++.+++.|++++... + . +++++++|+.+.+... +||+|
T Consensus 96 ~~~~~~~vLdiG~G~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~D~v 175 (280)
T 1i9g_A 96 DIFPGARVLEAGAGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSVDRA 175 (280)
T ss_dssp TCCTTCEEEEECCTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCEEEE
T ss_pred CCCCCCEEEEEcccccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCceeEE
Confidence 3457889999999999999999975 3 569999999999999999999877 5 2 8999999999876543 89999
Q ss_pred EEcCC
Q 028214 118 VMNPP 122 (212)
Q Consensus 118 ~~npp 122 (212)
++|+|
T Consensus 176 ~~~~~ 180 (280)
T 1i9g_A 176 VLDML 180 (280)
T ss_dssp EEESS
T ss_pred EECCc
Confidence 99987
No 168
>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*
Probab=99.34 E-value=2.3e-11 Score=93.68 Aligned_cols=111 Identities=11% Similarity=0.089 Sum_probs=82.7
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccc
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR 106 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~ 106 (212)
.....++...... .++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|++++...+. +++++++|+.
T Consensus 44 ~~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~ 120 (223)
T 3duw_A 44 PTQGKFLQLLVQI---QGARNILEIGTLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLAL 120 (223)
T ss_dssp HHHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCCCEEEEecCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHH
Confidence 3444455554433 26789999999999999999976 2 45999999999999999999998877 5999999997
Q ss_pred cCcCC------CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEE
Q 028214 107 NLEWR------GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 107 ~~~~~------~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~ 149 (212)
+.... .+||+|+++++. .....+++.+.+.++ ++++++
T Consensus 121 ~~~~~~~~~~~~~fD~v~~d~~~-----~~~~~~l~~~~~~L~pgG~lv~ 165 (223)
T 3duw_A 121 DSLQQIENEKYEPFDFIFIDADK-----QNNPAYFEWALKLSRPGTVIIG 165 (223)
T ss_dssp HHHHHHHHTTCCCCSEEEECSCG-----GGHHHHHHHHHHTCCTTCEEEE
T ss_pred HHHHHHHhcCCCCcCEEEEcCCc-----HHHHHHHHHHHHhcCCCcEEEE
Confidence 65332 369999999872 234566777766654 344433
No 169
>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*
Probab=99.34 E-value=1.1e-11 Score=94.79 Aligned_cols=92 Identities=15% Similarity=0.103 Sum_probs=74.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC-CceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.++..++..+. +|+|+|+++.+++.+++ .+ .+++++++|+.++....+||+|+++..+++
T Consensus 45 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~----~~~~~~~~~~~d~~~~~~~~~~D~v~~~~~l~~ 119 (218)
T 3ou2_A 45 NIRGDVLELASGTGYWTRHLSGLAD-RVTALDGSAEMIAEAGR----HGLDNVEFRQQDLFDWTPDRQWDAVFFAHWLAH 119 (218)
T ss_dssp TSCSEEEEESCTTSHHHHHHHHHSS-EEEEEESCHHHHHHHGG----GCCTTEEEEECCTTSCCCSSCEEEEEEESCGGG
T ss_pred CCCCeEEEECCCCCHHHHHHHhcCC-eEEEEeCCHHHHHHHHh----cCCCCeEEEecccccCCCCCceeEEEEechhhc
Confidence 3567999999999999999998755 99999999999999988 23 279999999998844459999999998887
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
........+++++.+.++
T Consensus 120 ~~~~~~~~~l~~~~~~L~ 137 (218)
T 3ou2_A 120 VPDDRFEAFWESVRSAVA 137 (218)
T ss_dssp SCHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 754333566776666654
No 170
>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3
Probab=99.34 E-value=1.5e-11 Score=94.41 Aligned_cols=94 Identities=14% Similarity=0.025 Sum_probs=67.7
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC----cCCCcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL----EWRGHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~----~~~~~~D~i~~ 119 (212)
...++.+|||+|||+|..+..+++. +..+|+|+|+|+.+++.+.++++... ++.++++|+... +...+||+|++
T Consensus 54 ~~~~g~~VLDlGcGtG~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~-~v~~~~~d~~~~~~~~~~~~~fD~V~~ 132 (210)
T 1nt2_A 54 KLRGDERVLYLGAASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERN-NIIPLLFDASKPWKYSGIVEKVDLIYQ 132 (210)
T ss_dssp CCCSSCEEEEETCTTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCS-SEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred CCCCCCEEEEECCcCCHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCC-CeEEEEcCCCCchhhcccccceeEEEE
Confidence 3457889999999999999998876 34589999999998877766665432 788899998774 23358999999
Q ss_pred cCCCCCCCCCchHHHHHHHHhhcC
Q 028214 120 NPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|.+. ......+++++.+.++
T Consensus 133 ~~~~----~~~~~~~l~~~~r~Lk 152 (210)
T 1nt2_A 133 DIAQ----KNQIEILKANAEFFLK 152 (210)
T ss_dssp CCCS----TTHHHHHHHHHHHHEE
T ss_pred eccC----hhHHHHHHHHHHHHhC
Confidence 9542 1222233566655544
No 171
>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A
Probab=99.34 E-value=9.5e-12 Score=94.32 Aligned_cols=92 Identities=16% Similarity=0.131 Sum_probs=74.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
++ +|||+|||+|.++..+++.+. +|+++|+++.+++.|+++....+.+++++++|+.+.+... +||+|+++.. +.
T Consensus 30 ~~-~vLdiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~--~~ 105 (202)
T 2kw5_A 30 QG-KILCLAEGEGRNACFLASLGY-EVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFC--HL 105 (202)
T ss_dssp SS-EEEECCCSCTHHHHHHHTTTC-EEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECC--CC
T ss_pred CC-CEEEECCCCCHhHHHHHhCCC-eEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhh--cC
Confidence 45 999999999999999998755 9999999999999999999887778999999999887554 8999999643 22
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
.......+++++.+.++
T Consensus 106 ~~~~~~~~l~~~~~~L~ 122 (202)
T 2kw5_A 106 PSSLRQQLYPKVYQGLK 122 (202)
T ss_dssp CHHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 22334466777777665
No 172
>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}
Probab=99.34 E-value=1.3e-11 Score=96.06 Aligned_cols=91 Identities=18% Similarity=0.309 Sum_probs=75.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
++.+|||+|||+|.++..++..+. +|+|+|+++.+++.++++.... +++++++|+.+++... +||+|+++..+++.
T Consensus 53 ~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 129 (242)
T 3l8d_A 53 KEAEVLDVGCGDGYGTYKLSRTGY-KAVGVDISEVMIQKGKERGEGP--DLSFIKGDLSSLPFENEQFEAIMAINSLEWT 129 (242)
T ss_dssp TTCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHTTTCBT--TEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred CCCeEEEEcCCCCHHHHHHHHcCC-eEEEEECCHHHHHHHHhhcccC--CceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence 678999999999999999998855 8999999999999999886332 7999999999987654 89999999998876
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
. .....++++.+.++
T Consensus 130 ~--~~~~~l~~~~~~L~ 144 (242)
T 3l8d_A 130 E--EPLRALNEIKRVLK 144 (242)
T ss_dssp S--CHHHHHHHHHHHEE
T ss_pred c--CHHHHHHHHHHHhC
Confidence 3 33456676666654
No 173
>1m6y_A S-adenosyl-methyltransferase MRAW; SAM-dependent methyltransferase fold, protein-cofactor product complex, structural genomics, PSI; HET: SAH; 1.90A {Thermotoga maritima} SCOP: a.60.13.1 c.66.1.23 PDB: 1n2x_A*
Probab=99.34 E-value=3.4e-12 Score=103.06 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=68.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC-----C-CcccEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----R-GHVDTV 117 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-----~-~~~D~i 117 (212)
...++.++||+|||+|.+++.+++.. ..+|+|+|+|+.+++.|++|+..++.+++++++|+.+++. . .+||.|
T Consensus 23 ~~~~g~~vLD~g~G~G~~s~~la~~~~~~~VigvD~d~~al~~A~~~~~~~g~~v~~v~~d~~~l~~~l~~~g~~~~D~V 102 (301)
T 1m6y_A 23 KPEDEKIILDCTVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDGI 102 (301)
T ss_dssp CCCTTCEEEETTCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEEE
T ss_pred CCCCCCEEEEEeCCcCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCHHHHHHHHHhcCCCCCCEE
Confidence 33478899999999999999999763 4699999999999999999998876689999999988642 1 379999
Q ss_pred EEcCCCC
Q 028214 118 VMNPPFG 124 (212)
Q Consensus 118 ~~nppy~ 124 (212)
++|||+.
T Consensus 103 l~D~gvS 109 (301)
T 1m6y_A 103 LMDLGVS 109 (301)
T ss_dssp EEECSCC
T ss_pred EEcCccc
Confidence 9999974
No 174
>3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ...
Probab=99.34 E-value=1.3e-11 Score=95.13 Aligned_cols=89 Identities=13% Similarity=0.225 Sum_probs=70.5
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccC
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL 108 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~ 108 (212)
...++...... .++.+|||+|||+|..++.+++. ...+|+++|+++.+++.|++|++..+. +++++++|+.+.
T Consensus 46 ~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~ 122 (221)
T 3u81_A 46 KGQIMDAVIRE---YSPSLVLELGAYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNGASQDL 122 (221)
T ss_dssp HHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHH
T ss_pred HHHHHHHHHHh---cCCCEEEEECCCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEECCHHHH
Confidence 34444444433 26789999999999999999974 246999999999999999999998887 599999998664
Q ss_pred cCC-------CcccEEEEcCCCC
Q 028214 109 EWR-------GHVDTVVMNPPFG 124 (212)
Q Consensus 109 ~~~-------~~~D~i~~nppy~ 124 (212)
... .+||+|+++.+.+
T Consensus 123 l~~~~~~~~~~~fD~V~~d~~~~ 145 (221)
T 3u81_A 123 IPQLKKKYDVDTLDMVFLDHWKD 145 (221)
T ss_dssp GGGTTTTSCCCCCSEEEECSCGG
T ss_pred HHHHHHhcCCCceEEEEEcCCcc
Confidence 221 3799999998654
No 175
>3ccf_A Cyclopropane-fatty-acyl-phospholipid synthase; YP_321342.1, putative methyltransferase; 1.90A {Anabaena variabilis atcc 29413}
Probab=99.33 E-value=2.1e-12 Score=103.00 Aligned_cols=91 Identities=21% Similarity=0.291 Sum_probs=74.5
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
..++.+|||+|||+|.++..++.. ..+|+|+|+++.+++.++++.. ++++.++|+.+++...+||+|+++..+++
T Consensus 55 ~~~~~~vLDiGcG~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~fD~v~~~~~l~~ 129 (279)
T 3ccf_A 55 PQPGEFILDLGCGTGQLTEKIAQS-GAEVLGTDNAATMIEKARQNYP----HLHFDVADARNFRVDKPLDAVFSNAMLHW 129 (279)
T ss_dssp CCTTCEEEEETCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHCT----TSCEEECCTTTCCCSSCEEEEEEESCGGG
T ss_pred CCCCCEEEEecCCCCHHHHHHHhC-CCeEEEEECCHHHHHHHHhhCC----CCEEEECChhhCCcCCCcCEEEEcchhhh
Confidence 347789999999999999999984 4599999999999999998762 68899999999877569999999999887
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
..+ ....++++.+.++
T Consensus 130 ~~d--~~~~l~~~~~~Lk 145 (279)
T 3ccf_A 130 VKE--PEAAIASIHQALK 145 (279)
T ss_dssp CSC--HHHHHHHHHHHEE
T ss_pred CcC--HHHHHHHHHHhcC
Confidence 632 3356666666654
No 176
>3bgv_A MRNA CAP guanine-N7 methyltransferase; alternative splicing, mRNA capping, mRNA processing, nucleus, phosphoprotein, RNA-binding; HET: SAH; 2.30A {Homo sapiens} PDB: 3epp_A*
Probab=99.33 E-value=1.7e-11 Score=99.31 Aligned_cols=113 Identities=16% Similarity=0.151 Sum_probs=83.2
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC--------CceEEEEcccccCc----C---CC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE--------LDIDFVQCDIRNLE----W---RG 112 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--------~~v~~~~~d~~~~~----~---~~ 112 (212)
++.+|||+|||+|.++..+++.+..+++++|+++.+++.|+++....+ .+++++++|+.+.+ . ..
T Consensus 34 ~~~~VLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~ 113 (313)
T 3bgv_A 34 RDITVLDLGCGKGGDLLKWKKGRINKLVCTDIADVSVKQCQQRYEDMKNRRDSEYIFSAEFITADSSKELLIDKFRDPQM 113 (313)
T ss_dssp -CCEEEEETCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHHSSSCC-CCCEEEEEECCTTTSCSTTTCSSTTC
T ss_pred CCCEEEEECCCCcHHHHHHHhcCCCEEEEEeCCHHHHHHHHHHHHHhhhcccccccceEEEEEecccccchhhhcccCCC
Confidence 677999999999999999997666799999999999999999887542 26899999999875 2 22
Q ss_pred cccEEEEcCCCCCC-CC-CchHHHHHHHHhhcCceEEEEecCchHHHHHH
Q 028214 113 HVDTVVMNPPFGTR-KK-GVDMDFLSMALKVASQAVYSLHKTSTREHVKK 160 (212)
Q Consensus 113 ~~D~i~~nppy~~~-~~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (212)
+||+|+++..+|+. .. .....+++++.+.++.+.+++....+...+..
T Consensus 114 ~fD~V~~~~~l~~~~~~~~~~~~~l~~~~~~LkpgG~li~~~~~~~~l~~ 163 (313)
T 3bgv_A 114 CFDICSCQFVCHYSFESYEQADMMLRNACERLSPGGYFIGTTPNSFELIR 163 (313)
T ss_dssp CEEEEEEETCGGGGGGSHHHHHHHHHHHHTTEEEEEEEEEEEECHHHHHH
T ss_pred CEEEEEEecchhhccCCHHHHHHHHHHHHHHhCCCcEEEEecCChHHHHH
Confidence 89999999988775 22 22346778887776543333333333333333
No 177
>3m4x_A NOL1/NOP2/SUN family protein; mtase domain, PUA domain, RRM motif, transferase; 2.28A {Enterococcus faecium}
Probab=99.33 E-value=7.1e-12 Score=106.45 Aligned_cols=81 Identities=16% Similarity=0.184 Sum_probs=70.0
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC--CCcccEEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--RGHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~--~~~~D~i~~ 119 (212)
...++.+|||+|||+|..++.++.. +...|+++|+++.+++.+++|++.++. ++.++++|..++.. ..+||+|++
T Consensus 102 ~~~~g~~VLDlcaGpGgkt~~lA~~~~~~g~V~AvDis~~rl~~~~~n~~r~g~~nv~v~~~Da~~l~~~~~~~FD~Il~ 181 (456)
T 3m4x_A 102 AAKPGEKVLDLCAAPGGKSTQLAAQMKGKGLLVTNEIFPKRAKILSENIERWGVSNAIVTNHAPAELVPHFSGFFDRIVV 181 (456)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHTCSSEEEECCCHHHHHHHHTTCEEEEEE
T ss_pred CCCCCCEEEEECCCcCHHHHHHHHHcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCceEEEeCCHHHhhhhccccCCEEEE
Confidence 3457899999999999999999865 346899999999999999999999988 79999999988752 348999999
Q ss_pred cCCCCC
Q 028214 120 NPPFGT 125 (212)
Q Consensus 120 nppy~~ 125 (212)
|||+..
T Consensus 182 DaPCSg 187 (456)
T 3m4x_A 182 DAPCSG 187 (456)
T ss_dssp ECCCCC
T ss_pred CCCCCC
Confidence 999754
No 178
>3bkx_A SAM-dependent methyltransferase; YP_807781.1, cyclopropane-fatty-acyl-phospholipid synthase-L protein, methyltransferase domain; 1.85A {Lactobacillus casei}
Probab=99.33 E-value=2.5e-11 Score=96.26 Aligned_cols=93 Identities=20% Similarity=0.186 Sum_probs=73.1
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CC-CeEEEEeCChH------HHHHHHHHHhhcCC--ceEEEEcc-
Q 028214 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSD------SLELASENAADLEL--DIDFVQCD- 104 (212)
Q Consensus 36 ~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~-~~v~~~D~~~~------~~~~a~~~~~~~~~--~v~~~~~d- 104 (212)
....+...+...++.+|||+|||+|.++..+++. +. .+|+|+|+++. +++.|++++...+. +++++++|
T Consensus 31 ~~~~l~~~~~~~~~~~vLDiGcG~G~~~~~l~~~~g~~~~v~gvD~s~~~~~~~~~~~~a~~~~~~~~~~~~v~~~~~d~ 110 (275)
T 3bkx_A 31 HRLAIAEAWQVKPGEKILEIGCGQGDLSAVLADQVGSSGHVTGIDIASPDYGAPLTLGQAWNHLLAGPLGDRLTVHFNTN 110 (275)
T ss_dssp HHHHHHHHHTCCTTCEEEEESCTTSHHHHHHHHHHCTTCEEEEECSSCTTCCSSSCHHHHHHHHHTSTTGGGEEEECSCC
T ss_pred HHHHHHHHcCCCCCCEEEEeCCCCCHHHHHHHHHhCCCCEEEEEECCccccccHHHHHHHHHHHHhcCCCCceEEEECCh
Confidence 3344444445568889999999999999999976 33 69999999997 99999999987765 79999998
Q ss_pred --cccCcCC-CcccEEEEcCCCCCCCC
Q 028214 105 --IRNLEWR-GHVDTVVMNPPFGTRKK 128 (212)
Q Consensus 105 --~~~~~~~-~~~D~i~~nppy~~~~~ 128 (212)
....+.. .+||+|+++.++++...
T Consensus 111 ~~~~~~~~~~~~fD~v~~~~~l~~~~~ 137 (275)
T 3bkx_A 111 LSDDLGPIADQHFDRVVLAHSLWYFAS 137 (275)
T ss_dssp TTTCCGGGTTCCCSEEEEESCGGGSSC
T ss_pred hhhccCCCCCCCEEEEEEccchhhCCC
Confidence 3343433 38999999999987744
No 179
>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}
Probab=99.33 E-value=1.9e-11 Score=96.02 Aligned_cols=110 Identities=13% Similarity=0.079 Sum_probs=82.7
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 32 ~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
....++...... .++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|++++...+. +++++++|+.+
T Consensus 50 ~~~~~l~~l~~~---~~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~ 126 (248)
T 3tfw_A 50 NQGQFLALLVRL---TQAKRILEIGTLGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQ 126 (248)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEECCTTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCCCEEEEecCCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444332 26789999999999999999976 2 56999999999999999999998876 69999999877
Q ss_pred CcC----CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEE
Q 028214 108 LEW----RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 108 ~~~----~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~ 149 (212)
... ..+||+|+++.+ ......+++++.+.++ ++++++
T Consensus 127 ~l~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~LkpGG~lv~ 168 (248)
T 3tfw_A 127 SLESLGECPAFDLIFIDAD-----KPNNPHYLRWALRYSRPGTLIIG 168 (248)
T ss_dssp HHHTCCSCCCCSEEEECSC-----GGGHHHHHHHHHHTCCTTCEEEE
T ss_pred HHHhcCCCCCeEEEEECCc-----hHHHHHHHHHHHHhcCCCeEEEE
Confidence 432 128999999876 2344567887777765 344443
No 180
>2gs9_A Hypothetical protein TT1324; methyl transferase, structural genomics, NPPSFA, national PR protein structural and functional analyses; HET: SAH; 2.60A {Thermus thermophilus}
Probab=99.33 E-value=4.2e-11 Score=91.30 Aligned_cols=87 Identities=16% Similarity=0.166 Sum_probs=71.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
++.+|||+|||+|.++..+ +..+++|+|+++.+++.++++. .+++++++|+.+++... +||+|+++..+++.
T Consensus 36 ~~~~vLdiG~G~G~~~~~l---~~~~v~~vD~s~~~~~~a~~~~----~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~ 108 (211)
T 2gs9_A 36 PGESLLEVGAGTGYWLRRL---PYPQKVGVEPSEAMLAVGRRRA----PEATWVRAWGEALPFPGESFDVVLLFTTLEFV 108 (211)
T ss_dssp CCSEEEEETCTTCHHHHHC---CCSEEEEECCCHHHHHHHHHHC----TTSEEECCCTTSCCSCSSCEEEEEEESCTTTC
T ss_pred CCCeEEEECCCCCHhHHhC---CCCeEEEEeCCHHHHHHHHHhC----CCcEEEEcccccCCCCCCcEEEEEEcChhhhc
Confidence 7789999999999998877 4448999999999999999887 26889999999887655 89999999988876
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
. .....++++.+.++
T Consensus 109 ~--~~~~~l~~~~~~L~ 123 (211)
T 2gs9_A 109 E--DVERVLLEARRVLR 123 (211)
T ss_dssp S--CHHHHHHHHHHHEE
T ss_pred C--CHHHHHHHHHHHcC
Confidence 4 23456666666654
No 181
>4fsd_A Arsenic methyltransferase; rossmann fold; 1.75A {Cyanidioschyzon SP} PDB: 4fr0_A* 4fs8_A 3p7e_A 3qnh_A 3qhu_A
Probab=99.32 E-value=1.4e-11 Score=102.81 Aligned_cols=95 Identities=24% Similarity=0.324 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhc-----C----CceEEEEcccccC------c
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIRNL------E 109 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~-----~----~~v~~~~~d~~~~------~ 109 (212)
.++.+|||+|||+|..+..+++. ...+|+|+|+++.+++.|+++++.+ | .+++++++|+.++ +
T Consensus 82 ~~~~~VLDlGcG~G~~~~~la~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~g~~~~~~v~~~~~d~~~l~~~~~~~ 161 (383)
T 4fsd_A 82 LEGATVLDLGCGTGRDVYLASKLVGEHGKVIGVDMLDNQLEVARKYVEYHAEKFFGSPSRSNVRFLKGFIENLATAEPEG 161 (383)
T ss_dssp GTTCEEEEESCTTSHHHHHHHHHHTTTCEEEEEECCHHHHHHHHHTHHHHHHHHHSSTTCCCEEEEESCTTCGGGCBSCC
T ss_pred CCCCEEEEecCccCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhhhhcccccCCCceEEEEccHHHhhhcccCC
Confidence 46789999999999999999875 3459999999999999999998754 3 3899999999986 5
Q ss_pred CCC-cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 110 WRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 110 ~~~-~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+. +||+|+++.++++..+ ...+++++.+.++
T Consensus 162 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~Lk 194 (383)
T 4fsd_A 162 VPDSSVDIVISNCVCNLSTN--KLALFKEIHRVLR 194 (383)
T ss_dssp CCTTCEEEEEEESCGGGCSC--HHHHHHHHHHHEE
T ss_pred CCCCCEEEEEEccchhcCCC--HHHHHHHHHHHcC
Confidence 444 8999999999987643 4567777776665
No 182
>3m6w_A RRNA methylase; rRNA methyltransferase, 5-methylcytidine, RSMF, adoMet, MULT specific, methyltransferase, transferase; HET: CXM SAM; 1.30A {Thermus thermophilus} PDB: 3m6v_A* 3m6u_A* 3m6x_A*
Probab=99.32 E-value=7.6e-12 Score=106.41 Aligned_cols=81 Identities=16% Similarity=0.170 Sum_probs=69.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC--CCcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--RGHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--~~~~D~i~~n 120 (212)
...++.+|||+|||+|..++.++.. +...|+++|+++.+++.+++|++.+|..+.++++|+.++.. ..+||+|++|
T Consensus 98 ~~~~g~~VLDlgaGpG~kt~~LA~~~~~~g~V~AvDis~~~l~~a~~n~~r~G~~v~~~~~Da~~l~~~~~~~FD~Il~D 177 (464)
T 3m6w_A 98 DPKPGERVLDLAAAPGGKTTHLAARMGGKGLLLANEVDGKRVRGLLENVERWGAPLAVTQAPPRALAEAFGTYFHRVLLD 177 (464)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHCCCCEEECSCHHHHHHHHCSCEEEEEEE
T ss_pred CcCCCCEEEEEcCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCeEEEEECCHHHhhhhccccCCEEEEC
Confidence 3457899999999999999999965 23589999999999999999999988778999999988762 3489999999
Q ss_pred CCCCC
Q 028214 121 PPFGT 125 (212)
Q Consensus 121 ppy~~ 125 (212)
|||..
T Consensus 178 ~PcSg 182 (464)
T 3m6w_A 178 APCSG 182 (464)
T ss_dssp CCCCC
T ss_pred CCcCC
Confidence 99853
No 183
>3adn_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, polyamine biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli} PDB: 3o4f_A
Probab=99.32 E-value=1.3e-11 Score=99.44 Aligned_cols=96 Identities=14% Similarity=0.133 Sum_probs=70.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc------CCceEEEEcccccCcCC--CcccEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL------ELDIDFVQCDIRNLEWR--GHVDTVV 118 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~------~~~v~~~~~d~~~~~~~--~~~D~i~ 118 (212)
++++|||+|||+|.+++++++. +..+|+++|+|+.+++.|++++... ..+++++++|+.++... .+||+|+
T Consensus 83 ~~~~VLdiG~G~G~~~~~l~~~~~~~~V~~VDid~~vi~~ar~~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fDvIi 162 (294)
T 3adn_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp TCCEEEEESCTTCHHHHHHHTCTTCCEEEEECSCTTHHHHHHHHCHHHHSSCTTCTTCCEECSCSCC---CCCCCEEEEE
T ss_pred CCCEEEEEeCChhHHHHHHHhCCCCCEEEEEECCHHHHHHHHHhhhhcccccccCCceEEEEChHHHHHhhcCCCccEEE
Confidence 5689999999999999999987 4568999999999999999998754 22799999999887543 3899999
Q ss_pred EcCCCCCCCCC--chHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKG--VDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~--~~~~~l~~~~~~~~ 143 (212)
+|++-...... ....+++.+.+.++
T Consensus 163 ~D~~~p~~~~~~l~~~~f~~~~~~~Lk 189 (294)
T 3adn_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLN 189 (294)
T ss_dssp ECC----------CCHHHHHHHHHTEE
T ss_pred ECCCCccCcchhccHHHHHHHHHHhcC
Confidence 98875332111 12567777777765
No 184
>2oyr_A UPF0341 protein YHIQ; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAH; 2.00A {Shigella flexneri 2A} SCOP: c.66.1.55 PDB: 2pgx_A 2pkw_A
Probab=99.32 E-value=7.2e-12 Score=98.93 Aligned_cols=79 Identities=15% Similarity=0.188 Sum_probs=63.7
Q ss_pred CC--CEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-------cC-C--ceEEEEcccccCcCC--Cc
Q 028214 48 SN--KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAAD-------LE-L--DIDFVQCDIRNLEWR--GH 113 (212)
Q Consensus 48 ~~--~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-------~~-~--~v~~~~~d~~~~~~~--~~ 113 (212)
++ .+|||+|||+|..++.+++.+. +|+++|+++.+++.++.+++. ++ . +++++++|..++... .+
T Consensus 86 ~g~~~~VLDl~~G~G~dal~lA~~g~-~V~~vE~~~~~~~l~~~~l~~a~~~~~~~~~l~~~i~~~~~D~~~~L~~~~~~ 164 (258)
T 2oyr_A 86 GDYLPDVVDATAGLGRDAFVLASVGC-RVRMLERNPVVAALLDDGLARGYADAEIGGWLQERLQLIHASSLTALTDITPR 164 (258)
T ss_dssp TTBCCCEEETTCTTCHHHHHHHHHTC-CEEEEECCHHHHHHHHHHHHHHHHCTTTHHHHHHHEEEEESCHHHHSTTCSSC
T ss_pred CCCCCEEEEcCCcCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHHHHhhHhhhhhhhcCEEEEECCHHHHHHhCccc
Confidence 45 7999999999999999998866 799999999887776666532 22 2 699999999885432 37
Q ss_pred ccEEEEcCCCCCCC
Q 028214 114 VDTVVMNPPFGTRK 127 (212)
Q Consensus 114 ~D~i~~nppy~~~~ 127 (212)
||+|++||||....
T Consensus 165 fDvV~lDP~y~~~~ 178 (258)
T 2oyr_A 165 PQVVYLDPMFPHKQ 178 (258)
T ss_dssp CSEEEECCCCCCCC
T ss_pred CCEEEEcCCCCCcc
Confidence 99999999997653
No 185
>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17
Probab=99.32 E-value=2.6e-11 Score=96.82 Aligned_cols=102 Identities=13% Similarity=0.104 Sum_probs=77.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC--CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i~~ 119 (212)
.+++|||+|||+|.++++++++ +..+|+++|+|+.+++.|++++... ..+++++++|+.+... ..+||+|++
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~Ii~ 154 (275)
T 1iy9_A 75 NPEHVLVVGGGDGGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVIMV 154 (275)
T ss_dssp SCCEEEEESCTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEEEE
T ss_pred CCCEEEEECCchHHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEEEE
Confidence 5689999999999999999987 5679999999999999999988531 1279999999887532 238999999
Q ss_pred cCCCCCCCCC--chHHHHHHHHhhcC-ceEEEE
Q 028214 120 NPPFGTRKKG--VDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 120 nppy~~~~~~--~~~~~l~~~~~~~~-~~~~~~ 149 (212)
|+|....... ....+++.+.+.++ ++++++
T Consensus 155 d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~ 187 (275)
T 1iy9_A 155 DSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVA 187 (275)
T ss_dssp SCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEE
T ss_pred CCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 9987543211 13567777777765 344433
No 186
>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A
Probab=99.31 E-value=3.4e-11 Score=93.05 Aligned_cols=93 Identities=15% Similarity=0.100 Sum_probs=71.5
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc----CCCcccEEEE
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE----WRGHVDTVVM 119 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~----~~~~~D~i~~ 119 (212)
..++.+|||+|||+|.++..+++. + ..+|+|+|+++.+++.++++++.+ .+++++++|+.+.. ...+||+|++
T Consensus 71 ~~~~~~vLDlG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~-~~v~~~~~d~~~~~~~~~~~~~~D~v~~ 149 (227)
T 1g8a_A 71 IKPGKSVLYLGIASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEER-RNIVPILGDATKPEEYRALVPKVDVIFE 149 (227)
T ss_dssp CCTTCEEEEETTTSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSC-TTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred CCCCCEEEEEeccCCHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhcc-CCCEEEEccCCCcchhhcccCCceEEEE
Confidence 457789999999999999999965 3 369999999999999999998765 37999999998732 2238999999
Q ss_pred cCCCCCCCCCchHHHHHHHHhhcC
Q 028214 120 NPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
++|. ......++.++.+.++
T Consensus 150 ~~~~----~~~~~~~l~~~~~~Lk 169 (227)
T 1g8a_A 150 DVAQ----PTQAKILIDNAEVYLK 169 (227)
T ss_dssp CCCS----TTHHHHHHHHHHHHEE
T ss_pred CCCC----HhHHHHHHHHHHHhcC
Confidence 9881 2222233666655544
No 187
>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}
Probab=99.31 E-value=5.8e-11 Score=92.16 Aligned_cols=106 Identities=15% Similarity=0.159 Sum_probs=81.6
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
......+...... .++.+|||+|||+|..++.+++.. ..+|+++|+++.+++.|++++...+. +++++++|+.+
T Consensus 40 ~~~~~~l~~~~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~ 116 (233)
T 2gpy_A 40 LLGMESLLHLLKM---AAPARILEIGTAIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQ 116 (233)
T ss_dssp HHHHHHHHHHHHH---HCCSEEEEECCTTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGG
T ss_pred HHHHHHHHHHHhc---cCCCEEEEecCCCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHH
Confidence 3344444444433 267899999999999999999763 46999999999999999999988876 69999999987
Q ss_pred CcC----CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCc
Q 028214 108 LEW----RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 108 ~~~----~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~ 144 (212)
... ..+||+|+++++.. ....+++.+.+.++.
T Consensus 117 ~~~~~~~~~~fD~I~~~~~~~-----~~~~~l~~~~~~L~p 152 (233)
T 2gpy_A 117 LGEKLELYPLFDVLFIDAAKG-----QYRRFFDMYSPMVRP 152 (233)
T ss_dssp SHHHHTTSCCEEEEEEEGGGS-----CHHHHHHHHGGGEEE
T ss_pred HHHhcccCCCccEEEECCCHH-----HHHHHHHHHHHHcCC
Confidence 522 24899999998843 445677777777653
No 188
>3ufb_A Type I restriction-modification system methyltran subunit; methyltransferase activity, transferase; 1.80A {Vibrio vulnificus}
Probab=99.30 E-value=4e-12 Score=110.15 Aligned_cols=101 Identities=20% Similarity=0.200 Sum_probs=80.5
Q ss_pred ccccCCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc----C----------CCeEEEEeCChHHHHHH
Q 028214 22 ELEQYPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G----------ADQVIAIDIDSDSLELA 87 (212)
Q Consensus 22 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~----~----------~~~v~~~D~~~~~~~~a 87 (212)
...+|.||+.+...|+..+. ..++.+|+|++||||.+.+.+.++ . ...++|.|+++.++..|
T Consensus 195 ~~GqfyTP~~Vv~lmv~l~~----p~~~~~I~DPacGsGgfL~~a~~~l~~~~~~~~~~~~~~~~~i~G~E~~~~~~~la 270 (530)
T 3ufb_A 195 DSGEFYTPRPVVRFMVEVMD----PQLGESVLDPACGTGGFLVEAFEHLERQCKTVEDREVLQESSIFGGEAKSLPYLLV 270 (530)
T ss_dssp SCCCCCCCHHHHHHHHHHHC----CCTTCCEEETTCTTTHHHHHHHHHHHTTCCSHHHHHHHHTCCEEEECCSHHHHHHH
T ss_pred cCceECCcHHHHHHHHHhhc----cCCCCEEEeCCCCcchHHHHHHHHHHHhccchhHHHHHhhhhhhhhhccHHHHHHH
Confidence 56889999998877765543 346789999999999999887653 1 23699999999999999
Q ss_pred HHHHhhcCC-ceEEEEcccccCcCC-----CcccEEEEcCCCCCC
Q 028214 88 SENAADLEL-DIDFVQCDIRNLEWR-----GHVDTVVMNPPFGTR 126 (212)
Q Consensus 88 ~~~~~~~~~-~v~~~~~d~~~~~~~-----~~~D~i~~nppy~~~ 126 (212)
+.|+-..+. ...+.++|....+.. .+||+|++||||...
T Consensus 271 ~mNl~lhg~~~~~I~~~dtL~~~~~~~~~~~~fD~Il~NPPf~~~ 315 (530)
T 3ufb_A 271 QMNLLLHGLEYPRIDPENSLRFPLREMGDKDRVDVILTNPPFGGE 315 (530)
T ss_dssp HHHHHHHTCSCCEEECSCTTCSCGGGCCGGGCBSEEEECCCSSCB
T ss_pred HHHHHhcCCccccccccccccCchhhhcccccceEEEecCCCCcc
Confidence 999988877 567888998765432 179999999999743
No 189
>3cgg_A SAM-dependent methyltransferase; NP_600671.1, methyltransferase domain, structural genomics; HET: NHE CIT; 2.00A {Corynebacterium glutamicum atcc 13032}
Probab=99.30 E-value=1.8e-11 Score=91.69 Aligned_cols=91 Identities=19% Similarity=0.274 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCC-CCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPP-FGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~npp-y~~ 125 (212)
++.+|||+|||+|.++..++..+. +++++|+++.+++.++++.. +++++++|+.+.+.+. +||+|+++++ +++
T Consensus 46 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~~~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~~D~i~~~~~~~~~ 120 (195)
T 3cgg_A 46 RGAKILDAGCGQGRIGGYLSKQGH-DVLGTDLDPILIDYAKQDFP----EARWVVGDLSVDQISETDFDLIVSAGNVMGF 120 (195)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHCT----TSEEEECCTTTSCCCCCCEEEEEECCCCGGG
T ss_pred CCCeEEEECCCCCHHHHHHHHCCC-cEEEEcCCHHHHHHHHHhCC----CCcEEEcccccCCCCCCceeEEEECCcHHhh
Confidence 678999999999999999998754 99999999999999998874 5889999999876543 8999999955 444
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
........+++++.+..+
T Consensus 121 ~~~~~~~~~l~~~~~~l~ 138 (195)
T 3cgg_A 121 LAEDGREPALANIHRALG 138 (195)
T ss_dssp SCHHHHHHHHHHHHHHEE
T ss_pred cChHHHHHHHHHHHHHhC
Confidence 332333566776666654
No 190
>3id6_C Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; C/D guide RNA, 2'-O-methylation, coiled-coil, methyltransfer binding, rRNA processing; HET: SAM; 2.60A {Sulfolobus solfataricus} SCOP: c.66.1.0 PDB: 3id5_B* 3pla_E*
Probab=99.30 E-value=5.1e-11 Score=92.63 Aligned_cols=84 Identities=12% Similarity=0.015 Sum_probs=63.3
Q ss_pred HHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC----CC
Q 028214 39 TAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW----RG 112 (212)
Q Consensus 39 ~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~----~~ 112 (212)
..+..+...++.+|||+|||+|..+..++.. + ..+|+|+|+++.+++.+.+.++.. .++.++++|+..... ..
T Consensus 67 ~~l~~~~l~~g~~VLDlG~GtG~~t~~la~~v~~~G~V~avD~s~~~l~~l~~~a~~r-~nv~~i~~Da~~~~~~~~~~~ 145 (232)
T 3id6_C 67 KGLKTNPIRKGTKVLYLGAASGTTISHVSDIIELNGKAYGVEFSPRVVRELLLVAQRR-PNIFPLLADARFPQSYKSVVE 145 (232)
T ss_dssp TTCSCCSCCTTCEEEEETCTTSHHHHHHHHHHTTTSEEEEEECCHHHHHHHHHHHHHC-TTEEEEECCTTCGGGTTTTCC
T ss_pred hhhhhcCCCCCCEEEEEeecCCHHHHHHHHHhCCCCEEEEEECcHHHHHHHHHHhhhc-CCeEEEEcccccchhhhcccc
Confidence 3333334668899999999999999999865 3 569999999999876554444332 279999999986432 23
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
+||+|++|.+.
T Consensus 146 ~~D~I~~d~a~ 156 (232)
T 3id6_C 146 NVDVLYVDIAQ 156 (232)
T ss_dssp CEEEEEECCCC
T ss_pred ceEEEEecCCC
Confidence 89999999874
No 191
>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*
Probab=99.30 E-value=1.6e-11 Score=95.57 Aligned_cols=93 Identities=17% Similarity=0.165 Sum_probs=71.6
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccccc
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRN 107 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~ 107 (212)
.+.+...++..+ ...++.+|||+|||+|.++..+++....+|+++|+++.+++.|++++...+. +++++++|+..
T Consensus 76 ~~~~~~~~~~~l----~~~~~~~vLdiG~G~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~ 151 (235)
T 1jg1_A 76 APHMVAIMLEIA----NLKPGMNILEVGTGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSK 151 (235)
T ss_dssp CHHHHHHHHHHH----TCCTTCCEEEECCTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGG
T ss_pred cHHHHHHHHHhc----CCCCCCEEEEEeCCcCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCccc
Confidence 344444444433 3347789999999999999999976426899999999999999999988876 79999999733
Q ss_pred CcCCC-cccEEEEcCCCCC
Q 028214 108 LEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 108 ~~~~~-~~D~i~~nppy~~ 125 (212)
..... .||+|+++.++++
T Consensus 152 ~~~~~~~fD~Ii~~~~~~~ 170 (235)
T 1jg1_A 152 GFPPKAPYDVIIVTAGAPK 170 (235)
T ss_dssp CCGGGCCEEEEEECSBBSS
T ss_pred CCCCCCCccEEEECCcHHH
Confidence 22222 5999999988654
No 192
>3s1s_A Restriction endonuclease bpusi; PD--(D/E)XK catalytic motif, gamma-N6M-adenosine methyltrans S-adenosyl-methionine binding, hydrolase; HET: SAH; 2.35A {Bacillus pumilus}
Probab=99.30 E-value=9.6e-12 Score=110.69 Aligned_cols=107 Identities=23% Similarity=0.218 Sum_probs=79.4
Q ss_pred cccccccCCCChHHHHHHHHHHHhhcC--CCCCCEEEEEcCCcChHHHHHHHcC----CCeEEEEeCChHHHHHH--HHH
Q 028214 19 PKVELEQYPTGPHIASRMLYTAENSFG--DVSNKVVADFGCGCGTLGAAATLLG----ADQVIAIDIDSDSLELA--SEN 90 (212)
Q Consensus 19 ~~~~~~~~~~~~~~~~~~l~~~~~~~~--~~~~~~vlDlg~G~G~~~~~~~~~~----~~~v~~~D~~~~~~~~a--~~~ 90 (212)
.+....+|.|++.++..|+..+....+ ..++.+|+|+|||+|.+++.+++.. ..+++|+|+++.+++.| +.|
T Consensus 290 ~Rkk~GqFYTP~eLA~lMVeLA~ill~~~l~~g~rVLDPaCGSG~FLIaaA~~l~ei~~~~IyGvEIDp~Al~LAK~RlN 369 (878)
T 3s1s_A 290 GRGHEGVVPTDIELGKVLSIISQHILGRPLTEDEVISDPAAGSGNLLATVSAGFNNVMPRQIWANDIETLFLELLSIRLG 369 (878)
T ss_dssp SCCCCBSSSCCHHHHHHHHHHHHHHHCSCCCTTCEEEETTCTTSHHHHHHHHTSTTCCGGGEEEECSCGGGHHHHHHHHH
T ss_pred hCCcCceEcCCHHHHHHHHHHHhhhccccCCCCCEEEECCCCccHHHHHHHHHhcccCCCeEEEEECCHHHHHHHHHHHH
Confidence 345678899999999888876322222 2357899999999999999998753 24799999999999999 667
Q ss_pred Hhhc----CC-ceEEEEcccccCc--CCCcccEEEEcCCCCC
Q 028214 91 AADL----EL-DIDFVQCDIRNLE--WRGHVDTVVMNPPFGT 125 (212)
Q Consensus 91 ~~~~----~~-~v~~~~~d~~~~~--~~~~~D~i~~nppy~~ 125 (212)
+..+ +. ...+...|+.... ...+||+|++||||..
T Consensus 370 L~lN~LlhGi~~~~I~~dD~L~~~~~~~~kFDVVIgNPPYg~ 411 (878)
T 3s1s_A 370 LLFPQLVSSNNAPTITGEDVCSLNPEDFANVSVVVMNPPYVS 411 (878)
T ss_dssp TTSTTTCBTTBCCEEECCCGGGCCGGGGTTEEEEEECCBCCS
T ss_pred HHHhhhhcCCCcceEEecchhcccccccCCCCEEEECCCccc
Confidence 6553 22 2366677776632 2238999999999964
No 193
>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*
Probab=99.30 E-value=2.1e-11 Score=97.57 Aligned_cols=95 Identities=15% Similarity=0.140 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc------------CCceEEEEcccccCcC-CCcc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL------------ELDIDFVQCDIRNLEW-RGHV 114 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~------------~~~v~~~~~d~~~~~~-~~~~ 114 (212)
.+.+|||+|||+|.+++.+++.+..+|+++|+|+.+++.|++++ .. ..+++++++|+.++.. ..+|
T Consensus 75 ~~~~VLdiG~G~G~~~~~l~~~~~~~v~~vDid~~~i~~ar~~~-~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~~~~f 153 (281)
T 1mjf_A 75 KPKRVLVIGGGDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLI-KIDNGLLEAMLNGKHEKAKLTIGDGFEFIKNNRGF 153 (281)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHT-CTTTTHHHHHHTTCCSSEEEEESCHHHHHHHCCCE
T ss_pred CCCeEEEEcCCcCHHHHHHHhCCCCEEEEEECCHHHHHHHHHHH-hhccccccccccCCCCcEEEEECchHHHhcccCCe
Confidence 56899999999999999999876679999999999999999988 22 2379999999876532 3489
Q ss_pred cEEEEcCCCCCCCC-C-chHHHHHHHHhhcC
Q 028214 115 DTVVMNPPFGTRKK-G-VDMDFLSMALKVAS 143 (212)
Q Consensus 115 D~i~~nppy~~~~~-~-~~~~~l~~~~~~~~ 143 (212)
|+|++|+|.+.... . ....+++.+.+.++
T Consensus 154 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~ 184 (281)
T 1mjf_A 154 DVIIADSTDPVGPAKVLFSEEFYRYVYDALN 184 (281)
T ss_dssp EEEEEECCCCC-----TTSHHHHHHHHHHEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHHhcC
Confidence 99999998743321 1 13567777777765
No 194
>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13
Probab=99.29 E-value=6.8e-11 Score=96.85 Aligned_cols=91 Identities=20% Similarity=0.274 Sum_probs=70.5
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcC------------CceEEEEcccccCc--
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLE------------LDIDFVQCDIRNLE-- 109 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~------------~~v~~~~~d~~~~~-- 109 (212)
..++.+|||+|||+|.+++.+++. +. .+|+++|+++.+++.|++|+...+ .+++++++|+.+..
T Consensus 103 ~~~g~~VLDiG~G~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~~~ 182 (336)
T 2b25_A 103 INPGDTVLEAGSGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGATED 182 (336)
T ss_dssp CCTTCEEEEECCTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC--
T ss_pred CCCCCEEEEeCCCcCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcccc
Confidence 457889999999999999999976 44 699999999999999999988532 27999999998863
Q ss_pred CCC-cccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 110 WRG-HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 110 ~~~-~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
... +||+|++|+|-.+ ..++++.+.++
T Consensus 183 ~~~~~fD~V~~~~~~~~-------~~l~~~~~~Lk 210 (336)
T 2b25_A 183 IKSLTFDAVALDMLNPH-------VTLPVFYPHLK 210 (336)
T ss_dssp -----EEEEEECSSSTT-------TTHHHHGGGEE
T ss_pred cCCCCeeEEEECCCCHH-------HHHHHHHHhcC
Confidence 222 7999999987332 14566666654
No 195
>3ggd_A SAM-dependent methyltransferase; YP_325210.1, structural GEN joint center for structural genomics, JCSG; HET: SAH; 2.11A {Anabaena variabilis atcc 29413}
Probab=99.29 E-value=7e-12 Score=97.94 Aligned_cols=94 Identities=18% Similarity=0.168 Sum_probs=77.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC------cccEEEEc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG------HVDTVVMN 120 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~------~~D~i~~n 120 (212)
.++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++.... +++++++|+.+.+... .||+|+++
T Consensus 55 ~~~~~vLD~GcG~G~~~~~la~~~~-~v~gvD~s~~~~~~a~~~~~~~--~~~~~~~d~~~~~~~~~~~~~~~~d~v~~~ 131 (245)
T 3ggd_A 55 NPELPLIDFACGNGTQTKFLSQFFP-RVIGLDVSKSALEIAAKENTAA--NISYRLLDGLVPEQAAQIHSEIGDANIYMR 131 (245)
T ss_dssp CTTSCEEEETCTTSHHHHHHHHHSS-CEEEEESCHHHHHHHHHHSCCT--TEEEEECCTTCHHHHHHHHHHHCSCEEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHHhCC-CEEEEECCHHHHHHHHHhCccc--CceEEECcccccccccccccccCccEEEEc
Confidence 4678999999999999999998866 8999999999999999987432 7999999998865432 38999999
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
..+++........+++++.+.++
T Consensus 132 ~~~~~~~~~~~~~~l~~~~~~Lk 154 (245)
T 3ggd_A 132 TGFHHIPVEKRELLGQSLRILLG 154 (245)
T ss_dssp SSSTTSCGGGHHHHHHHHHHHHT
T ss_pred chhhcCCHHHHHHHHHHHHHHcC
Confidence 99998865555667776666554
No 196
>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1
Probab=99.29 E-value=5e-11 Score=92.13 Aligned_cols=97 Identities=19% Similarity=0.189 Sum_probs=76.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC-------CcccE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR-------GHVDT 116 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~-------~~~D~ 116 (212)
++.+|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. +++++++|+.+.... .+||+
T Consensus 69 ~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~D~ 148 (229)
T 2avd_A 69 QAKKALDLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTFDV 148 (229)
T ss_dssp TCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCccE
Confidence 6789999999999999999975 2 46999999999999999999988876 799999998764221 47999
Q ss_pred EEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEE
Q 028214 117 VVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 117 i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~ 149 (212)
|++|++ ......+++.+.+..+ ++++++
T Consensus 149 v~~d~~-----~~~~~~~l~~~~~~L~pgG~lv~ 177 (229)
T 2avd_A 149 AVVDAD-----KENCSAYYERCLQLLRPGGILAV 177 (229)
T ss_dssp EEECSC-----STTHHHHHHHHHHHEEEEEEEEE
T ss_pred EEECCC-----HHHHHHHHHHHHHHcCCCeEEEE
Confidence 999987 2334567777776655 334433
No 197
>3r3h_A O-methyltransferase, SAM-dependent; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.65A {Legionella pneumophila subsp}
Probab=99.29 E-value=9.7e-12 Score=97.48 Aligned_cols=105 Identities=17% Similarity=0.165 Sum_probs=81.5
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 32 ~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
....++...... .++++|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. +++++++|+.+
T Consensus 47 ~~~~~l~~l~~~---~~~~~VLDiG~G~G~~t~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 123 (242)
T 3r3h_A 47 EQAQFMQMLIRL---TRAKKVLELGTFTGYSALAMSLALPDDGQVITCDINEGWTKHAHPYWREAKQEHKIKLRLGPALD 123 (242)
T ss_dssp HHHHHHHHHHHH---HTCSEEEEEESCCSHHHHHHHHTSCTTCEEEEEECCCSSCCCSHHHHHHTTCTTTEEEEESCHHH
T ss_pred HHHHHHHHHHhh---cCcCEEEEeeCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444433 26789999999999999999975 2 46999999999999999999998876 79999999987
Q ss_pred CcC-------CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCc
Q 028214 108 LEW-------RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 108 ~~~-------~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~ 144 (212)
... ..+||+|+++.+ ......+++.+.+.++.
T Consensus 124 ~l~~~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~Lkp 162 (242)
T 3r3h_A 124 TLHSLLNEGGEHQFDFIFIDAD-----KTNYLNYYELALKLVTP 162 (242)
T ss_dssp HHHHHHHHHCSSCEEEEEEESC-----GGGHHHHHHHHHHHEEE
T ss_pred HHHHHhhccCCCCEeEEEEcCC-----hHHhHHHHHHHHHhcCC
Confidence 543 248999999986 23455678877777653
No 198
>3fzg_A 16S rRNA methylase; methyltransferase, plasmid, transferase; HET: SAM; 2.00A {Escherichia coli}
Probab=99.29 E-value=2.9e-12 Score=96.02 Aligned_cols=102 Identities=19% Similarity=0.146 Sum_probs=75.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
++.+|||+|||+|.+++.++.. +..+++|+|+|+.+++.+++|+..+|...++...|..+...+..||+|++.-.+|..
T Consensus 49 ~~~~VLDlGCG~GplAl~l~~~~p~a~~~A~Di~~~~leiar~~~~~~g~~~~v~~~d~~~~~~~~~~DvVLa~k~LHlL 128 (200)
T 3fzg_A 49 HVSSILDFGCGFNPLALYQWNENEKIIYHAYDIDRAEIAFLSSIIGKLKTTIKYRFLNKESDVYKGTYDVVFLLKMLPVL 128 (200)
T ss_dssp CCSEEEEETCTTHHHHHHHHCSSCCCEEEEECSCHHHHHHHHHHHHHSCCSSEEEEECCHHHHTTSEEEEEEEETCHHHH
T ss_pred CCCeEEEecCCCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCccEEEecccccCCCCCcChhhHhhHHHhh
Confidence 5789999999999999999865 344999999999999999999999887434444676665555689999998888776
Q ss_pred CCCchHHHHHHHHhhcC-ceEEEEec
Q 028214 127 KKGVDMDFLSMALKVAS-QAVYSLHK 151 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~-~~~~~~~~ 151 (212)
++.. ..+.+++...+ ++++++..
T Consensus 129 ~~~~--~al~~v~~~L~pggvfISfp 152 (200)
T 3fzg_A 129 KQQD--VNILDFLQLFHTQNFVISFP 152 (200)
T ss_dssp HHTT--CCHHHHHHTCEEEEEEEEEE
T ss_pred hhhH--HHHHHHHHHhCCCCEEEEeC
Confidence 2111 12224444443 56776665
No 199
>2b9e_A NOL1/NOP2/SUN domain family, member 5 isoform 2; methytransferase, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.65A {Homo sapiens} SCOP: c.66.1.38
Probab=99.29 E-value=2.8e-11 Score=98.15 Aligned_cols=81 Identities=15% Similarity=0.179 Sum_probs=70.5
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC----CcccEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----GHVDTV 117 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----~~~D~i 117 (212)
...++.+|||+|||+|..+..++.. +..+|+++|+++.+++.+++|++.++. +++++++|+.++... .+||.|
T Consensus 99 ~~~~g~~VLDlcaG~G~kt~~la~~~~~~g~V~a~D~~~~~l~~~~~n~~r~g~~~v~~~~~D~~~~~~~~~~~~~fD~V 178 (309)
T 2b9e_A 99 DPPPGSHVIDACAAPGNKTSHLAALLKNQGKIFAFDLDAKRLASMATLLARAGVSCCELAEEDFLAVSPSDPRYHEVHYI 178 (309)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCGGGSCTTCGGGTTEEEE
T ss_pred CCCCCCEEEEeCCChhHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCeEEEEeCChHhcCccccccCCCCEE
Confidence 3457889999999999999999864 346999999999999999999999887 899999999887643 379999
Q ss_pred EEcCCCCC
Q 028214 118 VMNPPFGT 125 (212)
Q Consensus 118 ~~nppy~~ 125 (212)
++|||+..
T Consensus 179 l~D~PcSg 186 (309)
T 2b9e_A 179 LLDPSCSG 186 (309)
T ss_dssp EECCCCCC
T ss_pred EEcCCcCC
Confidence 99999953
No 200
>3ckk_A TRNA (guanine-N(7)-)-methyltransferase; mettl1, S-adenosyl-L-methionine, tRNA Pro structural genomics, structural genomics consortium, SGC; HET: SAM; 1.55A {Homo sapiens}
Probab=99.28 E-value=5.7e-11 Score=92.68 Aligned_cols=97 Identities=15% Similarity=0.230 Sum_probs=71.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh------cCC-ceEEEEccccc-Cc--C-CCccc
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD------LEL-DIDFVQCDIRN-LE--W-RGHVD 115 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~------~~~-~v~~~~~d~~~-~~--~-~~~~D 115 (212)
++.+|||+|||+|.+++.+++. +...|+|+|+++.+++.|++++.. .+. +++++++|+.+ ++ . ..+||
T Consensus 46 ~~~~vLDiGcG~G~~~~~la~~~p~~~v~GiDis~~~l~~A~~~~~~l~~~~~~~~~nv~~~~~d~~~~l~~~~~~~~~D 125 (235)
T 3ckk_A 46 AQVEFADIGCGYGGLLVELSPLFPDTLILGLEIRVKVSDYVQDRIRALRAAPAGGFQNIACLRSNAMKHLPNFFYKGQLT 125 (235)
T ss_dssp CCEEEEEETCTTCHHHHHHGGGSTTSEEEEEESCHHHHHHHHHHHHHHHHSTTCCCTTEEEEECCTTTCHHHHCCTTCEE
T ss_pred CCCeEEEEccCCcHHHHHHHHHCCCCeEEEEECCHHHHHHHHHHHHHHHHHHhcCCCeEEEEECcHHHhhhhhCCCcCee
Confidence 5668999999999999999976 356899999999999999988764 233 89999999987 43 2 33899
Q ss_pred EEEEcCCCCCC------CCCchHHHHHHHHhhcCc
Q 028214 116 TVVMNPPFGTR------KKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 116 ~i~~nppy~~~------~~~~~~~~l~~~~~~~~~ 144 (212)
.|+++.|-.+. +.-....+++++.+.++.
T Consensus 126 ~v~~~~~dp~~k~~h~krr~~~~~~l~~~~~~Lkp 160 (235)
T 3ckk_A 126 KMFFLFPDPHFKRTKHKWRIISPTLLAEYAYVLRV 160 (235)
T ss_dssp EEEEESCC-----------CCCHHHHHHHHHHEEE
T ss_pred EEEEeCCCchhhhhhhhhhhhhHHHHHHHHHHCCC
Confidence 99987553221 111224577777766653
No 201
>2vdw_A Vaccinia virus capping enzyme D1 subunit; nucleotidyltransferase, S-adenosyl-L-methionine, RNA metabolism, mRNA processing, methyltransferase, poxvirus; HET: SAH; 2.70A {Vaccinia virus}
Probab=99.28 E-value=3.7e-11 Score=97.17 Aligned_cols=109 Identities=14% Similarity=0.134 Sum_probs=76.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-------ceEEEEccc------ccCc---CC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDI------RNLE---WR 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-------~v~~~~~d~------~~~~---~~ 111 (212)
++.+|||+|||+|..+..++..+..+|+|+|+|+.+++.|+++....+. ++++.+.|+ .++. ..
T Consensus 48 ~~~~VLDlGCG~G~~l~~~~~~~~~~v~GiD~S~~~l~~A~~~~~~~~~~~~~~~~~~~f~~~d~~~d~~~~~l~~~~~~ 127 (302)
T 2vdw_A 48 NKRKVLAIDFGNGADLEKYFYGEIALLVATDPDADAIARGNERYNKLNSGIKTKYYKFDYIQETIRSDTFVSSVREVFYF 127 (302)
T ss_dssp SCCEEEETTCTTTTTHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCC----CCCEEEEEECCTTSSSHHHHHHTTCCS
T ss_pred CCCeEEEEecCCcHhHHHHHhcCCCeEEEEECCHHHHHHHHHHHHhccccccccccccchhhhhcccchhhhhhhccccC
Confidence 4689999999999877666665556999999999999999998876543 267888887 3221 22
Q ss_pred CcccEEEEcCCCCCC-CCCchHHHHHHHHhhcCceEEEEecCchHH
Q 028214 112 GHVDTVVMNPPFGTR-KKGVDMDFLSMALKVASQAVYSLHKTSTRE 156 (212)
Q Consensus 112 ~~~D~i~~nppy~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~ 156 (212)
.+||+|++.-.+|+. ........++++.+.++.+.+++.......
T Consensus 128 ~~FD~V~~~~~lhy~~~~~~~~~~l~~~~r~LkpGG~~i~~~~~~~ 173 (302)
T 2vdw_A 128 GKFNIIDWQFAIHYSFHPRHYATVMNNLSELTASGGKVLITTMDGD 173 (302)
T ss_dssp SCEEEEEEESCGGGTCSTTTHHHHHHHHHHHEEEEEEEEEEEECHH
T ss_pred CCeeEEEECchHHHhCCHHHHHHHHHHHHHHcCCCCEEEEEeCCHH
Confidence 389999988776653 222335777877777764444444444433
No 202
>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*
Probab=99.28 E-value=4.3e-11 Score=94.07 Aligned_cols=105 Identities=16% Similarity=0.202 Sum_probs=80.2
Q ss_pred HHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccc
Q 028214 31 HIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIR 106 (212)
Q Consensus 31 ~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~ 106 (212)
.....++...... .++++|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. +++++++|+.
T Consensus 65 ~~~~~ll~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~ 141 (247)
T 1sui_A 65 ADEGQFLSMLLKL---INAKNTMEIGVYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPAL 141 (247)
T ss_dssp HHHHHHHHHHHHH---TTCCEEEEECCGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHH
T ss_pred HHHHHHHHHHHHh---hCcCEEEEeCCCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHH
Confidence 3444455444443 36789999999999999999975 3 46999999999999999999998876 7999999997
Q ss_pred cCcC--------CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 107 NLEW--------RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 107 ~~~~--------~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+... ..+||+|+++.+ ......+++.+.+.++
T Consensus 142 ~~l~~l~~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~Lk 181 (247)
T 1sui_A 142 PVLDEMIKDEKNHGSYDFIFVDAD-----KDNYLNYHKRLIDLVK 181 (247)
T ss_dssp HHHHHHHHSGGGTTCBSEEEECSC-----STTHHHHHHHHHHHBC
T ss_pred HHHHHHHhccCCCCCEEEEEEcCc-----hHHHHHHHHHHHHhCC
Confidence 6522 348999999875 2334566777666654
No 203
>2frx_A Hypothetical protein YEBU; rossmann-type S-adenosylmethionine-dependent methyltransfera domain; 2.90A {Escherichia coli}
Probab=99.28 E-value=3.2e-11 Score=103.29 Aligned_cols=78 Identities=12% Similarity=0.231 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC--CCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--RGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~--~~~~D~i~~npp 122 (212)
++.+|||+|||+|..+..++.. + ...|+++|+++.+++.+++|++.++. +++++++|+.++.. ..+||.|++|||
T Consensus 117 ~g~~VLDl~aGpG~kt~~lA~~~~~~g~V~avDis~~~l~~~~~n~~r~g~~nv~~~~~D~~~~~~~~~~~fD~Il~D~P 196 (479)
T 2frx_A 117 APQRVMDVAAAPGSKTTQISARMNNEGAILANEFSASRVKVLHANISRCGISNVALTHFDGRVFGAAVPEMFDAILLDAP 196 (479)
T ss_dssp CCSEEEESSCTTSHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHHHHHTCCSEEEECCCSTTHHHHSTTCEEEEEEECC
T ss_pred CCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCCHHHhhhhccccCCEEEECCC
Confidence 7889999999999999999975 2 46899999999999999999998887 89999999988753 348999999999
Q ss_pred CCC
Q 028214 123 FGT 125 (212)
Q Consensus 123 y~~ 125 (212)
|..
T Consensus 197 cSg 199 (479)
T 2frx_A 197 CSG 199 (479)
T ss_dssp CCC
T ss_pred cCC
Confidence 853
No 204
>2vdv_E TRNA (guanine-N(7)-)-methyltransferase; S-adenosyl-L-methionine, phosphorylation, M7G, spout MT, tRNA processing; HET: SAM; 2.30A {Saccharomyces cerevisiae} PDB: 2vdu_E
Probab=99.28 E-value=9.3e-11 Score=91.89 Aligned_cols=96 Identities=17% Similarity=0.279 Sum_probs=72.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc--------CC-ceEEEEcccccC-c--C-CCc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL--------EL-DIDFVQCDIRNL-E--W-RGH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~--------~~-~v~~~~~d~~~~-~--~-~~~ 113 (212)
++.+|||+|||+|.+++.++..+ ..+|+|+|+++.+++.|+++++.+ +. +++++++|+.+. + . ...
T Consensus 49 ~~~~vLDiGcG~G~~~~~la~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~nv~~~~~D~~~~l~~~~~~~~ 128 (246)
T 2vdv_E 49 KKVTIADIGCGFGGLMIDLSPAFPEDLILGMEIRVQVTNYVEDRIIALRNNTASKHGFQNINVLRGNAMKFLPNFFEKGQ 128 (246)
T ss_dssp CCEEEEEETCTTSHHHHHHHHHSTTSEEEEEESCHHHHHHHHHHHHHHHHTC-CCSTTTTEEEEECCTTSCGGGTSCTTC
T ss_pred CCCEEEEEcCCCCHHHHHHHHhCCCCCEEEEEcCHHHHHHHHHHHHHHhhccccccCCCcEEEEeccHHHHHHHhccccc
Confidence 56799999999999999999875 348999999999999999998765 55 899999999873 3 2 237
Q ss_pred ccEEEEcCCCCCC------CCCchHHHHHHHHhhcC
Q 028214 114 VDTVVMNPPFGTR------KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 114 ~D~i~~nppy~~~------~~~~~~~~l~~~~~~~~ 143 (212)
+|.|+.+.|-.+. .......+++++.+.++
T Consensus 129 ~d~v~~~~p~p~~k~~~~~~r~~~~~~l~~~~~~Lk 164 (246)
T 2vdv_E 129 LSKMFFCFPDPHFKQRKHKARIITNTLLSEYAYVLK 164 (246)
T ss_dssp EEEEEEESCCCC------CSSCCCHHHHHHHHHHEE
T ss_pred cCEEEEECCCcccccchhHHhhccHHHHHHHHHHcC
Confidence 8988765432221 11222467777777665
No 205
>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*
Probab=99.28 E-value=6.5e-11 Score=96.50 Aligned_cols=96 Identities=11% Similarity=0.138 Sum_probs=73.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC--CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i~~ 119 (212)
++.+|||+|||+|.+++.+++. +..+|+++|+|+.+++.|++++... ..+++++++|+.+... ..+||+|++
T Consensus 116 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvIi~ 195 (321)
T 2pt6_A 116 EPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVIIV 195 (321)
T ss_dssp SCCEEEEEECTTCHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEEE
T ss_pred CCCEEEEEcCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEEEE
Confidence 5689999999999999999987 4579999999999999999998752 2279999999877532 348999999
Q ss_pred cCCCCC--CCCCchHHHHHHHHhhcC
Q 028214 120 NPPFGT--RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~--~~~~~~~~~l~~~~~~~~ 143 (212)
|++-.. ...-....+++.+.+.++
T Consensus 196 d~~~p~~~~~~l~~~~~l~~~~~~Lk 221 (321)
T 2pt6_A 196 DSSDPIGPAETLFNQNFYEKIYNALK 221 (321)
T ss_dssp ECCCSSSGGGGGSSHHHHHHHHHHEE
T ss_pred CCcCCCCcchhhhHHHHHHHHHHhcC
Confidence 985221 111112577777777765
No 206
>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}
Probab=99.26 E-value=8.5e-11 Score=91.73 Aligned_cols=104 Identities=17% Similarity=0.193 Sum_probs=79.9
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 32 ~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
....++...... .++++|||+|||+|..++.+++. + ..+++++|+++.+++.|+++++..+. +++++++|+.+
T Consensus 57 ~~~~~l~~l~~~---~~~~~VLeiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~ 133 (237)
T 3c3y_A 57 LAGQLMSFVLKL---VNAKKTIEVGVFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAML 133 (237)
T ss_dssp HHHHHHHHHHHH---TTCCEEEEECCTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---hCCCEEEEeCCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344455544443 36789999999999999999975 3 46999999999999999999998887 69999999987
Q ss_pred CcC--------CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 108 LEW--------RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 108 ~~~--------~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
... ..+||+|++|.+ ......+++.+.+.++
T Consensus 134 ~l~~l~~~~~~~~~fD~I~~d~~-----~~~~~~~l~~~~~~L~ 172 (237)
T 3c3y_A 134 ALDNLLQGQESEGSYDFGFVDAD-----KPNYIKYHERLMKLVK 172 (237)
T ss_dssp HHHHHHHSTTCTTCEEEEEECSC-----GGGHHHHHHHHHHHEE
T ss_pred HHHHHHhccCCCCCcCEEEECCc-----hHHHHHHHHHHHHhcC
Confidence 532 348999999865 2344566777766655
No 207
>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*
Probab=99.26 E-value=1.2e-10 Score=94.15 Aligned_cols=103 Identities=13% Similarity=0.125 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC---CCcccEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW---RGHVDTV 117 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~---~~~~D~i 117 (212)
.++.+|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++... ..+++++++|+.++.. ..+||+|
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDvI 173 (304)
T 3bwc_A 94 PKPERVLIIGGGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDVV 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEEE
T ss_pred CCCCeEEEEcCCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeEE
Confidence 36689999999999999999977 3569999999999999999987421 2279999999988764 3489999
Q ss_pred EEcCCCCCCCCC--chHHHHHHHHhhcC-ceEEEE
Q 028214 118 VMNPPFGTRKKG--VDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 118 ~~nppy~~~~~~--~~~~~l~~~~~~~~-~~~~~~ 149 (212)
++|++....... ....+++.+.+.++ ++++++
T Consensus 174 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~ 208 (304)
T 3bwc_A 174 IIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCN 208 (304)
T ss_dssp EEECC---------CCHHHHHHHHHHEEEEEEEEE
T ss_pred EECCCCccccchhhhHHHHHHHHHHhcCCCcEEEE
Confidence 999987543211 12567777777765 334433
No 208
>1sqg_A SUN protein, FMU protein; rossmann-fold, mixed beta sheet, methyltransferase-fold, RNA-binding domain; 1.65A {Escherichia coli} SCOP: a.79.1.3 c.66.1.38 PDB: 1sqf_A
Probab=99.26 E-value=4.7e-11 Score=101.05 Aligned_cols=81 Identities=20% Similarity=0.262 Sum_probs=70.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc--CC-CcccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE--WR-GHVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--~~-~~~D~i~~n 120 (212)
...++.+|||+|||+|..+..++... ..+|+++|+++.+++.+++|++.++.+++++++|+.+.+ .. .+||+|++|
T Consensus 243 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~v~a~D~~~~~l~~~~~~~~~~g~~~~~~~~D~~~~~~~~~~~~fD~Vl~D 322 (429)
T 1sqg_A 243 APQNGEHILDLCAAPGGKTTHILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRILLD 322 (429)
T ss_dssp CCCTTCEEEEESCTTCHHHHHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEEEE
T ss_pred CCCCcCeEEEECCCchHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHHcCCCeEEEeCchhhchhhcccCCCCEEEEe
Confidence 34578899999999999999999764 369999999999999999999988888899999998875 22 389999999
Q ss_pred CCCCC
Q 028214 121 PPFGT 125 (212)
Q Consensus 121 ppy~~ 125 (212)
|||..
T Consensus 323 ~Pcsg 327 (429)
T 1sqg_A 323 APCSA 327 (429)
T ss_dssp CCCCC
T ss_pred CCCCc
Confidence 99864
No 209
>3frh_A 16S rRNA methylase; methyltransferase domain, helical N-terminal domain, methyltransferase, plasmid, transferase; HET: SAH; 1.20A {Escherichia coli} PDB: 3fri_A* 3b89_A*
Probab=99.26 E-value=1.3e-10 Score=90.11 Aligned_cols=100 Identities=17% Similarity=0.185 Sum_probs=80.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
..+.+|||+|||+|.+++.+. +...++|+|+|+.+++.+++++..++.+..+..+|....+.+.+||+|+++-.+++.
T Consensus 104 ~~p~~VLDlGCG~gpLal~~~--~~~~y~a~DId~~~i~~ar~~~~~~g~~~~~~v~D~~~~~~~~~~DvvLllk~lh~L 181 (253)
T 3frh_A 104 ETPRRVLDIACGLNPLALYER--GIASVWGCDIHQGLGDVITPFAREKDWDFTFALQDVLCAPPAEAGDLALIFKLLPLL 181 (253)
T ss_dssp CCCSEEEEETCTTTHHHHHHT--TCSEEEEEESBHHHHHHHHHHHHHTTCEEEEEECCTTTSCCCCBCSEEEEESCHHHH
T ss_pred CCCCeEEEecCCccHHHHHhc--cCCeEEEEeCCHHHHHHHHHHHHhcCCCceEEEeecccCCCCCCcchHHHHHHHHHh
Confidence 467899999999999999988 567999999999999999999998888889999999988888899999998777665
Q ss_pred ---CCCchHHHHHHHHhhcCceEEEEec
Q 028214 127 ---KKGVDMDFLSMALKVASQAVYSLHK 151 (212)
Q Consensus 127 ---~~~~~~~~l~~~~~~~~~~~~~~~~ 151 (212)
.++.....++ +...+.++++..
T Consensus 182 E~q~~~~~~~ll~---aL~~~~vvVsfP 206 (253)
T 3frh_A 182 EREQAGSAMALLQ---SLNTPRMAVSFP 206 (253)
T ss_dssp HHHSTTHHHHHHH---HCBCSEEEEEEE
T ss_pred hhhchhhHHHHHH---HhcCCCEEEEcC
Confidence 2232222222 334457776665
No 210
>3e8s_A Putative SAM dependent methyltransferase; NP_744700.1, structural genomics, joint center for structural genom JCSG; HET: SAH; 2.10A {Pseudomonas putida KT2440}
Probab=99.26 E-value=7.5e-11 Score=90.46 Aligned_cols=87 Identities=20% Similarity=0.172 Sum_probs=69.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC---cCC--CcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL---EWR--GHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~---~~~--~~~D~i~~npp 122 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++ .++++.++|+.++ +.. .+||+|+++.+
T Consensus 52 ~~~~vLdiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~-----~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~~~ 125 (227)
T 3e8s_A 52 QPERVLDLGCGEGWLLRALADRGI-EAVGVDGDRTLVDAARAA-----GAGEVHLASYAQLAEAKVPVGKDYDLICANFA 125 (227)
T ss_dssp CCSEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHT-----CSSCEEECCHHHHHTTCSCCCCCEEEEEEESC
T ss_pred CCCEEEEeCCCCCHHHHHHHHCCC-EEEEEcCCHHHHHHHHHh-----cccccchhhHHhhcccccccCCCccEEEECch
Confidence 678999999999999999998755 899999999999999988 1577888888876 322 26999999999
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
++. .....+++++.+.++
T Consensus 126 l~~---~~~~~~l~~~~~~L~ 143 (227)
T 3e8s_A 126 LLH---QDIIELLSAMRTLLV 143 (227)
T ss_dssp CCS---SCCHHHHHHHHHTEE
T ss_pred hhh---hhHHHHHHHHHHHhC
Confidence 882 233456666666654
No 211
>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}
Probab=99.25 E-value=7e-11 Score=91.21 Aligned_cols=95 Identities=18% Similarity=0.236 Sum_probs=73.3
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCC------CeEEEEeCChHHHHHHHHHHhhcC-----C-
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGA------DQVIAIDIDSDSLELASENAADLE-----L- 96 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~------~~v~~~D~~~~~~~~a~~~~~~~~-----~- 96 (212)
.+.....++..+.. ...++.+|||+|||+|.++..+++... .+|+++|+++.+++.|++++...+ .
T Consensus 63 ~p~~~~~~~~~l~~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~ 140 (227)
T 2pbf_A 63 APHMHALSLKRLIN--VLKPGSRAIDVGSGSGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKID 140 (227)
T ss_dssp CHHHHHHHHHHHTT--TSCTTCEEEEESCTTSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSST
T ss_pred ChHHHHHHHHHHHh--hCCCCCEEEEECCCCCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccC
Confidence 34445444444321 234678999999999999999997632 499999999999999999998776 3
Q ss_pred ceEEEEcccccCc----C-CCcccEEEEcCCCCC
Q 028214 97 DIDFVQCDIRNLE----W-RGHVDTVVMNPPFGT 125 (212)
Q Consensus 97 ~v~~~~~d~~~~~----~-~~~~D~i~~nppy~~ 125 (212)
+++++++|+.+.. . ..+||+|+++.++++
T Consensus 141 ~v~~~~~d~~~~~~~~~~~~~~fD~I~~~~~~~~ 174 (227)
T 2pbf_A 141 NFKIIHKNIYQVNEEEKKELGLFDAIHVGASASE 174 (227)
T ss_dssp TEEEEECCGGGCCHHHHHHHCCEEEEEECSBBSS
T ss_pred CEEEEECChHhcccccCccCCCcCEEEECCchHH
Confidence 7999999998754 2 238999999988763
No 212
>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}
Probab=99.25 E-value=1.7e-11 Score=95.60 Aligned_cols=88 Identities=19% Similarity=0.309 Sum_probs=71.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC--cCC-CcccEEEEcCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWR-GHVDTVVMNPPFG 124 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~~~-~~~D~i~~nppy~ 124 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+|+.+++.++++ ++++++|+.+. +.. .+||+|+++-.++
T Consensus 41 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~~~~a~~~-------~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~ 112 (240)
T 3dli_A 41 GCRRVLDIGCGRGEFLELCKEEGI-ESIGVDINEDMIKFCEGK-------FNVVKSDAIEYLKSLPDKYLDGVMISHFVE 112 (240)
T ss_dssp TCSCEEEETCTTTHHHHHHHHHTC-CEEEECSCHHHHHHHHTT-------SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred CCCeEEEEeCCCCHHHHHHHhCCC-cEEEEECCHHHHHHHHhh-------cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence 568999999999999999998755 799999999999999887 67889998875 333 3899999999988
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
+........+++++.+.++
T Consensus 113 ~~~~~~~~~~l~~~~~~Lk 131 (240)
T 3dli_A 113 HLDPERLFELLSLCYSKMK 131 (240)
T ss_dssp GSCGGGHHHHHHHHHHHBC
T ss_pred hCCcHHHHHHHHHHHHHcC
Confidence 8765444567776666654
No 213
>1u2z_A Histone-lysine N-methyltransferase, H3 lysine-79 specific; histone methyltransferase, nucleosome; HET: SAH; 2.20A {Saccharomyces cerevisiae} SCOP: c.66.1.31
Probab=99.25 E-value=1.4e-10 Score=97.70 Aligned_cols=107 Identities=17% Similarity=0.153 Sum_probs=76.5
Q ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHH-------HHHHhhcC--C-ce
Q 028214 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELA-------SENAADLE--L-DI 98 (212)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a-------~~~~~~~~--~-~v 98 (212)
+.+...++.. +...++.+|||+|||+|.+++.+++. +..+|+|+|+++.+++.| ++++...+ . ++
T Consensus 228 p~~v~~ml~~----l~l~~g~~VLDLGCGsG~la~~LA~~~g~~~V~GVDis~~~l~~A~~Ml~~ar~~~~~~Gl~~~nV 303 (433)
T 1u2z_A 228 PNFLSDVYQQ----CQLKKGDTFMDLGSGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNV 303 (433)
T ss_dssp HHHHHHHHHH----TTCCTTCEEEEESCTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCE
T ss_pred HHHHHHHHHh----cCCCCCCEEEEeCCCcCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHhHHHHHHHHHHcCCCCCce
Confidence 4555555543 23457889999999999999999975 566899999999999999 88888777 3 79
Q ss_pred EEEEcccccC--c---CCCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 99 DFVQCDIRNL--E---WRGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 99 ~~~~~d~~~~--~---~~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++++|.... + ....||+|++|..... ......++++.+.++
T Consensus 304 ~~i~gD~~~~~~~~~~~~~~FDvIvvn~~l~~---~d~~~~L~el~r~LK 350 (433)
T 1u2z_A 304 EFSLKKSFVDNNRVAELIPQCDVILVNNFLFD---EDLNKKVEKILQTAK 350 (433)
T ss_dssp EEEESSCSTTCHHHHHHGGGCSEEEECCTTCC---HHHHHHHHHHHTTCC
T ss_pred EEEEcCccccccccccccCCCCEEEEeCcccc---ccHHHHHHHHHHhCC
Confidence 9999865432 1 1238999999865421 122345566666654
No 214
>4azs_A Methyltransferase WBDD; kinase; HET: AMP SAM; 2.15A {Escherichia coli} PDB: 4azt_A* 4azv_A* 4azw_A*
Probab=99.24 E-value=3.8e-11 Score=105.02 Aligned_cols=78 Identities=19% Similarity=0.291 Sum_probs=69.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCc--C-CCcccEEEEcCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLE--W-RGHVDTVVMNPPF 123 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~--~-~~~~D~i~~nppy 123 (212)
++.+|||+|||.|.++..+|+.|+ .|+|+|.++.+++.|+..+...+. ++++.+++++++. . ..+||+|++.-++
T Consensus 66 ~~~~vLDvGCG~G~~~~~la~~ga-~V~giD~~~~~i~~a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~fD~v~~~e~~ 144 (569)
T 4azs_A 66 RPLNVLDLGCAQGFFSLSLASKGA-TIVGIDFQQENINVCRALAEENPDFAAEFRVGRIEEVIAALEEGEFDLAIGLSVF 144 (569)
T ss_dssp SCCEEEEETCTTSHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTSTTSEEEEEECCHHHHHHHCCTTSCSEEEEESCH
T ss_pred CCCeEEEECCCCcHHHHHHHhCCC-EEEEECCCHHHHHHHHHHHHhcCCCceEEEECCHHHHhhhccCCCccEEEECcch
Confidence 567999999999999999999877 899999999999999999988774 8999999999873 2 2389999998888
Q ss_pred CCC
Q 028214 124 GTR 126 (212)
Q Consensus 124 ~~~ 126 (212)
+|.
T Consensus 145 ehv 147 (569)
T 4azs_A 145 HHI 147 (569)
T ss_dssp HHH
T ss_pred hcC
Confidence 776
No 215
>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}
Probab=99.24 E-value=1.6e-10 Score=89.99 Aligned_cols=91 Identities=11% Similarity=0.084 Sum_probs=72.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC-------------
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW------------- 110 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~------------- 110 (212)
++.+|||+|||+|..++.+++.. ..+|+++|+++.+++.|++++...+. +++++++|+.+...
T Consensus 60 ~~~~VLdiG~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~~~ 139 (239)
T 2hnk_A 60 GAKRIIEIGTFTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSWAS 139 (239)
T ss_dssp TCSEEEEECCTTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGGGT
T ss_pred CcCEEEEEeCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccccc
Confidence 67899999999999999999763 46999999999999999999988776 49999999876321
Q ss_pred ----C-CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 111 ----R-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 111 ----~-~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
. .+||+|+++... .....+++.+.+.++
T Consensus 140 ~f~~~~~~fD~I~~~~~~-----~~~~~~l~~~~~~L~ 172 (239)
T 2hnk_A 140 DFAFGPSSIDLFFLDADK-----ENYPNYYPLILKLLK 172 (239)
T ss_dssp TTCCSTTCEEEEEECSCG-----GGHHHHHHHHHHHEE
T ss_pred cccCCCCCcCEEEEeCCH-----HHHHHHHHHHHHHcC
Confidence 1 579999998542 233456677766654
No 216
>1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A
Probab=99.24 E-value=1.2e-10 Score=95.46 Aligned_cols=98 Identities=16% Similarity=0.176 Sum_probs=75.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC---CCcccEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW---RGHVDTV 117 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~---~~~~D~i 117 (212)
..+.+|||+|||+|.+++.+++.. ..+|+++|+|+.+++.|++++... ..+++++++|+.++.. ..+||+|
T Consensus 119 ~~~~~VLdIG~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~D~~~~l~~~~~~~fDlI 198 (334)
T 1xj5_A 119 PNPKKVLVIGGGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV 198 (334)
T ss_dssp SCCCEEEEETCSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred CCCCEEEEECCCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEECCHHHHHHhccCCCccEE
Confidence 356899999999999999999873 569999999999999999998642 2279999999887532 2389999
Q ss_pred EEcCCCCCC--CCCchHHHHHHHHhhcCc
Q 028214 118 VMNPPFGTR--KKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 118 ~~nppy~~~--~~~~~~~~l~~~~~~~~~ 144 (212)
++|++-... ..-....+++.+.+.++.
T Consensus 199 i~d~~~p~~~~~~l~~~~~l~~~~~~Lkp 227 (334)
T 1xj5_A 199 IVDSSDPIGPAKELFEKPFFQSVARALRP 227 (334)
T ss_dssp EECCCCTTSGGGGGGSHHHHHHHHHHEEE
T ss_pred EECCCCccCcchhhhHHHHHHHHHHhcCC
Confidence 999863221 111135778887777653
No 217
>3bxo_A N,N-dimethyltransferase; desosamine, sugar, carbohydrate, antibiotic, SAM, adoMet; HET: SAM UPP; 2.00A {Streptomyces venezuelae}
Probab=99.23 E-value=1.1e-10 Score=90.45 Aligned_cols=99 Identities=17% Similarity=0.131 Sum_probs=74.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEE-cCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVM-NPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~-nppy~~ 125 (212)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++.. +++++++|+.+.+...+||+|++ ...+++
T Consensus 39 ~~~~~vLdiG~G~G~~~~~l~~~~~-~v~~~D~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~D~v~~~~~~~~~ 113 (239)
T 3bxo_A 39 PEASSLLDVACGTGTHLEHFTKEFG-DTAGLELSEDMLTHARKRLP----DATLHQGDMRDFRLGRKFSAVVSMFSSVGY 113 (239)
T ss_dssp TTCCEEEEETCTTSHHHHHHHHHHS-EEEEEESCHHHHHHHHHHCT----TCEEEECCTTTCCCSSCEEEEEECTTGGGG
T ss_pred CCCCeEEEecccCCHHHHHHHHhCC-cEEEEeCCHHHHHHHHHhCC----CCEEEECCHHHcccCCCCcEEEEcCchHhh
Confidence 3678999999999999999998755 89999999999999998753 58999999998876558999995 445555
Q ss_pred CCC-CchHHHHHHHHhhcCceEEEEe
Q 028214 126 RKK-GVDMDFLSMALKVASQAVYSLH 150 (212)
Q Consensus 126 ~~~-~~~~~~l~~~~~~~~~~~~~~~ 150 (212)
... .....+++++.+.++.+..+++
T Consensus 114 ~~~~~~~~~~l~~~~~~L~pgG~l~~ 139 (239)
T 3bxo_A 114 LKTTEELGAAVASFAEHLEPGGVVVV 139 (239)
T ss_dssp CCSHHHHHHHHHHHHHTEEEEEEEEE
T ss_pred cCCHHHHHHHHHHHHHhcCCCeEEEE
Confidence 432 3334566766666553333333
No 218
>2yxl_A PH0851 protein, 450AA long hypothetical FMU protein; FMU-homolog, methyltransferase, structural genomics, NPPSFA; HET: SFG; 2.55A {Pyrococcus horikoshii}
Probab=99.23 E-value=1.5e-10 Score=98.53 Aligned_cols=82 Identities=15% Similarity=0.191 Sum_probs=70.6
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC--C-CcccEEE
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW--R-GHVDTVV 118 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~--~-~~~D~i~ 118 (212)
...++.+|||+|||+|..+..++.. +. .+|+++|+++.+++.+++|++..+. +++++++|+.+.+. . .+||+|+
T Consensus 256 ~~~~g~~VLDlgaG~G~~t~~la~~~~~~~~v~a~D~s~~~l~~~~~~~~~~g~~~v~~~~~D~~~~~~~~~~~~fD~Vl 335 (450)
T 2yxl_A 256 DPKPGETVVDLAAAPGGKTTHLAELMKNKGKIYAFDVDKMRMKRLKDFVKRMGIKIVKPLVKDARKAPEIIGEEVADKVL 335 (450)
T ss_dssp CCCTTCEEEESSCTTCHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHTTCCSEEEECSCTTCCSSSSCSSCEEEEE
T ss_pred CCCCcCEEEEeCCCccHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEEEcChhhcchhhccCCCCEEE
Confidence 3457889999999999999999975 32 6899999999999999999998887 89999999988763 3 3799999
Q ss_pred EcCCCCCC
Q 028214 119 MNPPFGTR 126 (212)
Q Consensus 119 ~nppy~~~ 126 (212)
+|||+...
T Consensus 336 ~D~Pcsg~ 343 (450)
T 2yxl_A 336 LDAPCTSS 343 (450)
T ss_dssp EECCCCCG
T ss_pred EcCCCCCC
Confidence 99998543
No 219
>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*
Probab=99.22 E-value=4.2e-11 Score=96.56 Aligned_cols=96 Identities=14% Similarity=0.145 Sum_probs=71.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh----c-CCceEEEEcccccCcC--CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD----L-ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~----~-~~~v~~~~~d~~~~~~--~~~~D~i~~ 119 (212)
.+.+|||+|||+|.+++.+++. +..+|+++|+|+.+++.|++++.. . ..+++++++|+.+... ..+||+|++
T Consensus 90 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii~ 169 (296)
T 1inl_A 90 NPKKVLIIGGGDGGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVIII 169 (296)
T ss_dssp SCCEEEEEECTTCHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEEEE
Confidence 5689999999999999999987 457999999999999999999854 1 2279999999877532 238999999
Q ss_pred cCCCCCCC---CCchHHHHHHHHhhcC
Q 028214 120 NPPFGTRK---KGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~---~~~~~~~l~~~~~~~~ 143 (212)
|+|..+.. .-....+++.+.+.++
T Consensus 170 d~~~~~~~~~~~l~~~~~l~~~~~~Lk 196 (296)
T 1inl_A 170 DSTDPTAGQGGHLFTEEFYQACYDALK 196 (296)
T ss_dssp EC----------CCSHHHHHHHHHHEE
T ss_pred cCCCcccCchhhhhHHHHHHHHHHhcC
Confidence 98754111 1123567777777665
No 220
>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*
Probab=99.22 E-value=2.1e-10 Score=91.93 Aligned_cols=98 Identities=11% Similarity=0.127 Sum_probs=76.1
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC--CCcccEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVV 118 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i~ 118 (212)
.++++|||+|||+|..+..+++.. ..+|+++|+|+.+++.|++++... ..+++++++|+.+... ..+||+|+
T Consensus 77 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (283)
T 2i7c_A 77 KEPKNVLVVGGGDGGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVII 156 (283)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEEE
T ss_pred CCCCeEEEEeCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEEE
Confidence 356899999999999999999774 569999999999999999998653 2379999999987542 34899999
Q ss_pred EcCCCCCCCCC--chHHHHHHHHhhcCc
Q 028214 119 MNPPFGTRKKG--VDMDFLSMALKVASQ 144 (212)
Q Consensus 119 ~nppy~~~~~~--~~~~~l~~~~~~~~~ 144 (212)
+|++.+..... ....+++.+.+.++.
T Consensus 157 ~d~~~~~~~~~~l~~~~~l~~~~~~L~p 184 (283)
T 2i7c_A 157 VDSSDPIGPAETLFNQNFYEKIYNALKP 184 (283)
T ss_dssp EECCCTTTGGGGGSSHHHHHHHHHHEEE
T ss_pred EcCCCCCCcchhhhHHHHHHHHHHhcCC
Confidence 99875432211 125778877777653
No 221
>2avn_A Ubiquinone/menaquinone biosynthesis methyltransfe related protein; ubiquinone/menaquinone biosynthesis methyltransferase-relate protein; HET: SAI; 2.35A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.22 E-value=2.1e-10 Score=90.51 Aligned_cols=89 Identities=19% Similarity=0.225 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~ 126 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++... .++++|+.+++... +||+|++..++.+.
T Consensus 54 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~gvD~s~~~l~~a~~~~~~-----~~~~~d~~~~~~~~~~fD~v~~~~~~~~~ 127 (260)
T 2avn_A 54 NPCRVLDLGGGTGKWSLFLQERGF-EVVLVDPSKEMLEVAREKGVK-----NVVEAKAEDLPFPSGAFEAVLALGDVLSY 127 (260)
T ss_dssp SCCEEEEETCTTCHHHHHHHTTTC-EEEEEESCHHHHHHHHHHTCS-----CEEECCTTSCCSCTTCEEEEEECSSHHHH
T ss_pred CCCeEEEeCCCcCHHHHHHHHcCC-eEEEEeCCHHHHHHHHhhcCC-----CEEECcHHHCCCCCCCEEEEEEcchhhhc
Confidence 678999999999999999998754 899999999999999988651 28899998887654 89999997654433
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
... ....++++.+.++
T Consensus 128 ~~~-~~~~l~~~~~~Lk 143 (260)
T 2avn_A 128 VEN-KDKAFSEIRRVLV 143 (260)
T ss_dssp CSC-HHHHHHHHHHHEE
T ss_pred ccc-HHHHHHHHHHHcC
Confidence 222 5567777776665
No 222
>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*
Probab=99.22 E-value=8.2e-11 Score=95.20 Aligned_cols=97 Identities=10% Similarity=0.122 Sum_probs=71.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC--CCcccEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVV 118 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i~ 118 (212)
..+++|||+|||+|.+++.+++++ ..+|+++|+|+.+++.|++++... ..+++++++|+.++.. ..+||+|+
T Consensus 94 ~~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~Ii 173 (304)
T 2o07_A 94 PNPRKVLIIGGGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVII 173 (304)
T ss_dssp SSCCEEEEEECTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEEE
T ss_pred CCCCEEEEECCCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEEE
Confidence 366899999999999999999874 469999999999999999998651 2379999999977432 23899999
Q ss_pred EcCCCCCCCCC--chHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKG--VDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~--~~~~~l~~~~~~~~ 143 (212)
+|+|.+..... ....+++.+.+.++
T Consensus 174 ~d~~~~~~~~~~l~~~~~l~~~~~~Lk 200 (304)
T 2o07_A 174 TDSSDPMGPAESLFKESYYQLMKTALK 200 (304)
T ss_dssp EECC-----------CHHHHHHHHHEE
T ss_pred ECCCCCCCcchhhhHHHHHHHHHhccC
Confidence 99986532111 12356777776665
No 223
>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}
Probab=99.21 E-value=6.4e-11 Score=87.26 Aligned_cols=88 Identities=17% Similarity=0.245 Sum_probs=69.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.++.+|||+|||+|.++..+++.+. +++|+|+++.+++.++++. .++++.++| ..+ ...+||+|+++.++++.
T Consensus 16 ~~~~~vLDiG~G~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~----~~v~~~~~d-~~~-~~~~~D~v~~~~~l~~~ 88 (170)
T 3i9f_A 16 GKKGVIVDYGCGNGFYCKYLLEFAT-KLYCIDINVIALKEVKEKF----DSVITLSDP-KEI-PDNSVDFILFANSFHDM 88 (170)
T ss_dssp SCCEEEEEETCTTCTTHHHHHTTEE-EEEEECSCHHHHHHHHHHC----TTSEEESSG-GGS-CTTCEEEEEEESCSTTC
T ss_pred CCCCeEEEECCCCCHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhC----CCcEEEeCC-CCC-CCCceEEEEEccchhcc
Confidence 3678999999999999999998765 9999999999999999882 278999999 222 22389999999999876
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
. ....+++++.+.++
T Consensus 89 ~--~~~~~l~~~~~~L~ 103 (170)
T 3i9f_A 89 D--DKQHVISEVKRILK 103 (170)
T ss_dssp S--CHHHHHHHHHHHEE
T ss_pred c--CHHHHHHHHHHhcC
Confidence 3 23456666666654
No 224
>2r3s_A Uncharacterized protein; methyltransferase domain, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE; 2.15A {Nostoc punctiforme}
Probab=99.21 E-value=1.7e-10 Score=94.18 Aligned_cols=96 Identities=16% Similarity=0.167 Sum_probs=77.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy 123 (212)
.++.+|||+|||+|.++..+++. +..+++++|++ .+++.|++++...+. ++++.++|+.+.+.+..||+|++.-++
T Consensus 164 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~D~v~~~~~l 242 (335)
T 2r3s_A 164 IEPLKVLDISASHGLFGIAVAQHNPNAEIFGVDWA-SVLEVAKENARIQGVASRYHTIAGSAFEVDYGNDYDLVLLPNFL 242 (335)
T ss_dssp CCCSEEEEETCTTCHHHHHHHHHCTTCEEEEEECH-HHHHHHHHHHHHHTCGGGEEEEESCTTTSCCCSCEEEEEEESCG
T ss_pred CCCCEEEEECCCcCHHHHHHHHHCCCCeEEEEecH-HHHHHHHHHHHhcCCCcceEEEecccccCCCCCCCcEEEEcchh
Confidence 46789999999999999999976 34599999999 999999999987766 699999999886555579999998787
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++.........++++.+..+
T Consensus 243 ~~~~~~~~~~~l~~~~~~L~ 262 (335)
T 2r3s_A 243 HHFDVATCEQLLRKIKTALA 262 (335)
T ss_dssp GGSCHHHHHHHHHHHHHHEE
T ss_pred ccCCHHHHHHHHHHHHHhCC
Confidence 76544444566777766654
No 225
>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}
Probab=99.20 E-value=2.2e-10 Score=89.00 Aligned_cols=105 Identities=16% Similarity=0.130 Sum_probs=79.0
Q ss_pred HHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEccccc
Q 028214 32 IASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRN 107 (212)
Q Consensus 32 ~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~ 107 (212)
....++...... .++++|||+|||+|..++.+++. + ..+|+++|+++.+++.|+++++..+. +++++++|+.+
T Consensus 59 ~~~~~l~~l~~~---~~~~~vLdiG~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~ 135 (232)
T 3cbg_A 59 EQAQFLGLLISL---TGAKQVLEIGVFRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALA 135 (232)
T ss_dssp HHHHHHHHHHHH---HTCCEEEEECCTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHH
T ss_pred HHHHHHHHHHHh---cCCCEEEEecCCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHH
Confidence 344444444432 26789999999999999999975 2 45999999999999999999988776 69999999865
Q ss_pred CcC-----C--CcccEEEEcCCCCCCCCCchHHHHHHHHhhcCc
Q 028214 108 LEW-----R--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 108 ~~~-----~--~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~ 144 (212)
... . .+||+|+++.+ ......+++.+.+.++.
T Consensus 136 ~l~~l~~~~~~~~fD~V~~d~~-----~~~~~~~l~~~~~~Lkp 174 (232)
T 3cbg_A 136 TLEQLTQGKPLPEFDLIFIDAD-----KRNYPRYYEIGLNLLRR 174 (232)
T ss_dssp HHHHHHTSSSCCCEEEEEECSC-----GGGHHHHHHHHHHTEEE
T ss_pred HHHHHHhcCCCCCcCEEEECCC-----HHHHHHHHHHHHHHcCC
Confidence 321 1 47999999876 23445677777776653
No 226
>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}
Probab=99.20 E-value=1.3e-10 Score=94.13 Aligned_cols=95 Identities=12% Similarity=0.102 Sum_probs=74.0
Q ss_pred CCEEEEEcCCcChHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcC---CCcccEEEEcCCC
Q 028214 49 NKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEW---RGHVDTVVMNPPF 123 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~---~~~~D~i~~nppy 123 (212)
..+|||+|||+|.++..+++ .+..+|+++|+|+.+++.|++++..... +++++++|+.++.. ..+||+|++|.+.
T Consensus 90 ~~rVLdIG~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~ 169 (317)
T 3gjy_A 90 KLRITHLGGGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA 169 (317)
T ss_dssp GCEEEEESCGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred CCEEEEEECCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence 34999999999999999998 4555899999999999999999865432 79999999988643 2389999998765
Q ss_pred CCCCC--CchHHHHHHHHhhcC
Q 028214 124 GTRKK--GVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~--~~~~~~l~~~~~~~~ 143 (212)
+.... -....+++.+.+.++
T Consensus 170 ~~~~~~~L~t~efl~~~~r~Lk 191 (317)
T 3gjy_A 170 GAITPQNFTTVEFFEHCHRGLA 191 (317)
T ss_dssp TSCCCGGGSBHHHHHHHHHHEE
T ss_pred ccccchhhhHHHHHHHHHHhcC
Confidence 43211 123577887777765
No 227
>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7
Probab=99.20 E-value=7.5e-11 Score=91.19 Aligned_cols=95 Identities=16% Similarity=0.154 Sum_probs=72.2
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CC------CeEEEEeCChHHHHHHHHHHhhcC-----C
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GA------DQVIAIDIDSDSLELASENAADLE-----L 96 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~------~~v~~~D~~~~~~~~a~~~~~~~~-----~ 96 (212)
.+.+...++..+.. ...++.+|||+|||+|.++..+++. +. .+|+++|+++.+++.|++++...+ .
T Consensus 67 ~p~~~~~~~~~l~~--~~~~~~~VLdiG~G~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~ 144 (227)
T 1r18_A 67 APHMHAFALEYLRD--HLKPGARILDVGSGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDS 144 (227)
T ss_dssp CHHHHHHHHHHTTT--TCCTTCEEEEESCTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHH
T ss_pred ChHHHHHHHHHHHh--hCCCCCEEEEECCCccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCC
Confidence 44555555544322 1246789999999999999999874 32 489999999999999999987654 2
Q ss_pred -ceEEEEcccccCcCC-CcccEEEEcCCCCC
Q 028214 97 -DIDFVQCDIRNLEWR-GHVDTVVMNPPFGT 125 (212)
Q Consensus 97 -~v~~~~~d~~~~~~~-~~~D~i~~nppy~~ 125 (212)
+++++++|+.+.... ..||+|+++.++++
T Consensus 145 ~~v~~~~~d~~~~~~~~~~fD~I~~~~~~~~ 175 (227)
T 1r18_A 145 GQLLIVEGDGRKGYPPNAPYNAIHVGAAAPD 175 (227)
T ss_dssp TSEEEEESCGGGCCGGGCSEEEEEECSCBSS
T ss_pred CceEEEECCcccCCCcCCCccEEEECCchHH
Confidence 799999999874333 48999999988754
No 228
>3p2e_A 16S rRNA methylase; methyltransferase, transferase, NPMA; HET: SAH; 1.68A {Escherichia coli} PDB: 3p2i_A 3p2k_A* 3pb3_A* 3mte_A*
Probab=99.19 E-value=4.5e-11 Score=92.67 Aligned_cols=96 Identities=21% Similarity=0.257 Sum_probs=71.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCC-hHHHHHH---HHHHhhcCC-ceEEEEcccccCcCC--CcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDID-SDSLELA---SENAADLEL-DIDFVQCDIRNLEWR--GHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~-~~~~~~a---~~~~~~~~~-~v~~~~~d~~~~~~~--~~~D~i~~ 119 (212)
++.+|||+|||+|.++..+++. +..+|+|+|+| +.+++.| ++++...+. +++++++|+.+++.. +.+|.|.+
T Consensus 24 ~~~~vLDiGCG~G~~~~~la~~~~~~~v~GvD~s~~~ml~~A~~A~~~~~~~~~~~v~~~~~d~~~l~~~~~d~v~~i~~ 103 (225)
T 3p2e_A 24 FDRVHIDLGTGDGRNIYKLAINDQNTFYIGIDPVKENLFDISKKIIKKPSKGGLSNVVFVIAAAESLPFELKNIADSISI 103 (225)
T ss_dssp CSEEEEEETCTTSHHHHHHHHTCTTEEEEEECSCCGGGHHHHHHHTSCGGGTCCSSEEEECCBTTBCCGGGTTCEEEEEE
T ss_pred CCCEEEEEeccCcHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHHHHHcCCCCeEEEEcCHHHhhhhccCeEEEEEE
Confidence 6789999999999999999854 45589999999 6666665 888877776 799999999988642 37888899
Q ss_pred cCCCCCC---CCCchHHHHHHHHhhcC
Q 028214 120 NPPFGTR---KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~---~~~~~~~~l~~~~~~~~ 143 (212)
++|+... .......+++++.+.++
T Consensus 104 ~~~~~~~~~~~~~~~~~~l~~~~r~Lk 130 (225)
T 3p2e_A 104 LFPWGTLLEYVIKPNRDILSNVADLAK 130 (225)
T ss_dssp ESCCHHHHHHHHTTCHHHHHHHHTTEE
T ss_pred eCCCcHHhhhhhcchHHHHHHHHHhcC
Confidence 9886532 00112345666666665
No 229
>3lcv_B Sisomicin-gentamicin resistance methylase SGM; antibiotic resistance, methyltransferase, transferase; HET: SAM; 2.00A {Micromonospora zionensis} PDB: 3lcu_A*
Probab=99.19 E-value=2.5e-11 Score=95.00 Aligned_cols=104 Identities=16% Similarity=0.153 Sum_probs=83.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
...+|||+|||+|.+++.++.. +..+++++|+|+.+++.++.|+..+|...++.+.|....+++..||+++++-.+++.
T Consensus 132 ~p~~VLDLGCG~GpLAl~~~~~~p~a~y~a~DId~~~le~a~~~l~~~g~~~~~~v~D~~~~~p~~~~DvaL~lkti~~L 211 (281)
T 3lcv_B 132 RPNTLRDLACGLNPLAAPWMGLPAETVYIASDIDARLVGFVDEALTRLNVPHRTNVADLLEDRLDEPADVTLLLKTLPCL 211 (281)
T ss_dssp CCSEEEETTCTTGGGCCTTTTCCTTCEEEEEESBHHHHHHHHHHHHHTTCCEEEEECCTTTSCCCSCCSEEEETTCHHHH
T ss_pred CCceeeeeccCccHHHHHHHhhCCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEeeecccCCCCCcchHHHHHHHHHh
Confidence 4679999999999999999876 567999999999999999999999998899999999988877799999999887766
Q ss_pred CCCchHHHHHHHHhhc-CceEEEEecC
Q 028214 127 KKGVDMDFLSMALKVA-SQAVYSLHKT 152 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~-~~~~~~~~~~ 152 (212)
.+...-.-+ +.+... .+.++++...
T Consensus 212 e~q~kg~g~-~ll~aL~~~~vvVSfp~ 237 (281)
T 3lcv_B 212 ETQQRGSGW-EVIDIVNSPNIVVTFPT 237 (281)
T ss_dssp HHHSTTHHH-HHHHHSSCSEEEEEEEC
T ss_pred hhhhhHHHH-HHHHHhCCCCEEEeccc
Confidence 322222222 344443 4677776654
No 230
>2i62_A Nicotinamide N-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAH; 1.80A {Mus musculus} PDB: 2iip_A* 3rod_A*
Probab=99.19 E-value=7.1e-11 Score=92.97 Aligned_cols=99 Identities=13% Similarity=0.096 Sum_probs=75.4
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----------------------------
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---------------------------- 96 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---------------------------- 96 (212)
...++.+|||+|||+|.++..++..+..+|+|+|+++.+++.+++++...+.
T Consensus 53 ~~~~~~~vLDlGcG~G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 132 (265)
T 2i62_A 53 GAVKGELLIDIGSGPTIYQLLSACESFTEIIVSDYTDQNLWELQKWLKKEPGAFDWSPVVTYVCDLEGNRMKGPEKEEKL 132 (265)
T ss_dssp SSCCEEEEEEESCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHTTTCSCHHHHHHHH
T ss_pred cccCCCEEEEECCCccHHHHHHhhcccCeEEEecCCHHHHHHHHHHHhcCCccccchhhhhhhhcccccccchHHHHHHh
Confidence 4457789999999999999999877656899999999999999998865431
Q ss_pred --ce-EEEEcccccCcC--C---CcccEEEEcCCCCCCCCC--chHHHHHHHHhhcC
Q 028214 97 --DI-DFVQCDIRNLEW--R---GHVDTVVMNPPFGTRKKG--VDMDFLSMALKVAS 143 (212)
Q Consensus 97 --~v-~~~~~d~~~~~~--~---~~~D~i~~nppy~~~~~~--~~~~~l~~~~~~~~ 143 (212)
++ ++.++|+.+... . .+||+|+++..+++.... .....++++.+.++
T Consensus 133 ~~~v~~~~~~d~~~~~~~~~~~~~~fD~v~~~~~l~~~~~~~~~~~~~l~~~~~~Lk 189 (265)
T 2i62_A 133 RRAIKQVLKCDVTQSQPLGGVSLPPADCLLSTLCLDAACPDLPAYRTALRNLGSLLK 189 (265)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE
T ss_pred hhhheeEEEeeeccCCCCCccccCCccEEEEhhhhhhhcCChHHHHHHHHHHHhhCC
Confidence 27 899999988643 3 489999998776633222 33456677666654
No 231
>2a14_A Indolethylamine N-methyltransferase; SGC,INMT, structural genomics, structural genomics consortium; HET: SAH; 1.70A {Homo sapiens} SCOP: c.66.1.15
Probab=99.19 E-value=3.5e-11 Score=95.25 Aligned_cols=99 Identities=12% Similarity=0.059 Sum_probs=72.2
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC-----------------------------
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----------------------------- 95 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----------------------------- 95 (212)
...++.+|||+|||+|.+++.++..+..+|+|+|+|+.+++.|+++++...
T Consensus 52 ~~~~g~~vLDiGCG~G~~~~~~~~~~~~~v~g~D~s~~~l~~a~~~~~~~~~~~d~s~~~~~~~~~~~~~~~~~~~~~~~ 131 (263)
T 2a14_A 52 GGLQGDTLIDIGSGPTIYQVLAACDSFQDITLSDFTDRNREELEKWLKKEPGAYDWTPAVKFACELEGNSGRWEEKEEKL 131 (263)
T ss_dssp TSCCEEEEEESSCTTCCGGGTTGGGTEEEEEEEESCHHHHHHHHHHHHTCTTCCCCHHHHHHHHHHTTCGGGHHHHHHHH
T ss_pred CCCCCceEEEeCCCccHHHHHHHHhhhcceeeccccHHHHHHHHHHHhcCCCcccchHHHHHHHhcCCCCcchhhHHHHH
Confidence 445788999999999998888777776689999999999999998765431
Q ss_pred -CceE-EEEcccccCcC-----CCcccEEEEcCCCCCCCC--CchHHHHHHHHhhcC
Q 028214 96 -LDID-FVQCDIRNLEW-----RGHVDTVVMNPPFGTRKK--GVDMDFLSMALKVAS 143 (212)
Q Consensus 96 -~~v~-~~~~d~~~~~~-----~~~~D~i~~nppy~~~~~--~~~~~~l~~~~~~~~ 143 (212)
.++. ++++|+.+..+ ..+||+|+++-.+++... ......++++.+.++
T Consensus 132 ~~~i~~~~~~D~~~~~~~~~~~~~~fD~V~~~~~l~~i~~~~~~~~~~l~~i~r~LK 188 (263)
T 2a14_A 132 RAAVKRVLKCDVHLGNPLAPAVLPLADCVLTLLAMECACCSLDAYRAALCNLASLLK 188 (263)
T ss_dssp HHHEEEEEECCTTSSSTTTTCCCCCEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE
T ss_pred HhhhheEEeccccCCCCCCccccCCCCEeeehHHHHHhcCCHHHHHHHHHHHHHHcC
Confidence 0243 89999988421 238999999877765321 222356666666654
No 232
>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}
Probab=99.19 E-value=2.5e-10 Score=88.18 Aligned_cols=69 Identities=25% Similarity=0.280 Sum_probs=59.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccc-cCcCC--CcccEEEEcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIR-NLEWR--GHVDTVVMNP 121 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~-~~~~~--~~~D~i~~np 121 (212)
++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.++++.. +++++++|+. .++.. .+||+|++++
T Consensus 48 ~~~~vLDiGcG~G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~~~fD~v~~~~ 119 (226)
T 3m33_A 48 PQTRVLEAGCGHGPDAARFGPQAA-RWAAYDFSPELLKLARANAP----HADVYEWNGKGELPAGLGAPFGLIVSRR 119 (226)
T ss_dssp TTCEEEEESCTTSHHHHHHGGGSS-EEEEEESCHHHHHHHHHHCT----TSEEEECCSCSSCCTTCCCCEEEEEEES
T ss_pred CCCeEEEeCCCCCHHHHHHHHcCC-EEEEEECCHHHHHHHHHhCC----CceEEEcchhhccCCcCCCCEEEEEeCC
Confidence 678999999999999999998854 99999999999999999822 6899999994 45544 3899999984
No 233
>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*
Probab=99.18 E-value=2.5e-10 Score=88.00 Aligned_cols=79 Identities=20% Similarity=0.202 Sum_probs=66.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CC-CeEEEEeCChHHHHHHHHHHhhcCC------ceEEEEcccccCcCC-CcccEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GA-DQVIAIDIDSDSLELASENAADLEL------DIDFVQCDIRNLEWR-GHVDTV 117 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~-~~v~~~D~~~~~~~~a~~~~~~~~~------~v~~~~~d~~~~~~~-~~~D~i 117 (212)
.++.+|||+|||+|..+..+++. +. .+|+++|+++.+++.+++++...+. +++++++|+...... ..||+|
T Consensus 76 ~~~~~vLDiG~G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~i 155 (226)
T 1i1n_A 76 HEGAKALDVGSGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYDAI 155 (226)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEEEE
T ss_pred CCCCEEEEEcCCcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcCEE
Confidence 46789999999999999999975 33 5999999999999999999887542 799999999865443 389999
Q ss_pred EEcCCCCC
Q 028214 118 VMNPPFGT 125 (212)
Q Consensus 118 ~~nppy~~ 125 (212)
+++.++++
T Consensus 156 ~~~~~~~~ 163 (226)
T 1i1n_A 156 HVGAAAPV 163 (226)
T ss_dssp EECSBBSS
T ss_pred EECCchHH
Confidence 99988753
No 234
>1qzz_A RDMB, aclacinomycin-10-hydroxylase; anthracycline, methyltransferase, polyketide, tailoring enzymes, structural proteomics in E spine; HET: SAM; 2.10A {Streptomyces purpurascens} SCOP: a.4.5.29 c.66.1.12 PDB: 1r00_A* 1xds_A* 1xdu_A*
Probab=99.17 E-value=3e-10 Score=94.18 Aligned_cols=96 Identities=18% Similarity=0.134 Sum_probs=77.1
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
..++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++++...+. +++++++|+.+.. +..||+|+++..
T Consensus 180 ~~~~~~vlDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~-~~~~D~v~~~~v 257 (374)
T 1qzz_A 180 WSAVRHVLDVGGGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGDFFKPL-PVTADVVLLSFV 257 (374)
T ss_dssp CTTCCEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSCC-SCCEEEEEEESC
T ss_pred CCCCCEEEEECCCcCHHHHHHHHHCCCCEEEEEeC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCcC-CCCCCEEEEecc
Confidence 3467899999999999999999764 458999999 9999999999988775 6999999997632 235999999999
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+++..+......++++.+..+
T Consensus 258 l~~~~~~~~~~~l~~~~~~L~ 278 (374)
T 1qzz_A 258 LLNWSDEDALTILRGCVRALE 278 (374)
T ss_dssp GGGSCHHHHHHHHHHHHHHEE
T ss_pred ccCCCHHHHHHHHHHHHHhcC
Confidence 887644433467777776654
No 235
>1ej0_A FTSJ; methyltransferase, adoMet, adenosyl methionine, heat shock proteins, 23S ribosomal RNA; HET: SAM; 1.50A {Escherichia coli} SCOP: c.66.1.2 PDB: 1eiz_A*
Probab=99.17 E-value=2e-10 Score=84.47 Aligned_cols=70 Identities=21% Similarity=0.272 Sum_probs=57.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc--------CC-Cccc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE--------WR-GHVD 115 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~--------~~-~~~D 115 (212)
.++.+|||+|||+|.++..+++. + ..+++++|+++ +++. .++++.++|+.+.+ .. .+||
T Consensus 21 ~~~~~vLd~G~G~G~~~~~l~~~~~~~~~v~~~D~~~-~~~~---------~~~~~~~~d~~~~~~~~~~~~~~~~~~~D 90 (180)
T 1ej0_A 21 KPGMTVVDLGAAPGGWSQYVVTQIGGKGRIIACDLLP-MDPI---------VGVDFLQGDFRDELVMKALLERVGDSKVQ 90 (180)
T ss_dssp CTTCEEEEESCTTCHHHHHHHHHHCTTCEEEEEESSC-CCCC---------TTEEEEESCTTSHHHHHHHHHHHTTCCEE
T ss_pred CCCCeEEEeCCCCCHHHHHHHHHhCCCCeEEEEECcc-cccc---------CcEEEEEcccccchhhhhhhccCCCCcee
Confidence 46789999999999999999976 4 36999999998 6532 26899999998874 33 3899
Q ss_pred EEEEcCCCCCC
Q 028214 116 TVVMNPPFGTR 126 (212)
Q Consensus 116 ~i~~nppy~~~ 126 (212)
+|++|+|+++.
T Consensus 91 ~i~~~~~~~~~ 101 (180)
T 1ej0_A 91 VVMSDMAPNMS 101 (180)
T ss_dssp EEEECCCCCCC
T ss_pred EEEECCCcccc
Confidence 99999998865
No 236
>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17
Probab=99.17 E-value=7.7e-11 Score=95.73 Aligned_cols=96 Identities=13% Similarity=0.147 Sum_probs=70.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcC--CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEW--RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~--~~~~D~i~~ 119 (212)
.+++|||+|||+|.+++.+++. +..+|+++|+|+.+++.|++++... ..+++++++|+.+... ..+||+|++
T Consensus 108 ~~~~VLdIG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~Ii~ 187 (314)
T 2b2c_A 108 DPKRVLIIGGGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVIIT 187 (314)
T ss_dssp SCCEEEEESCTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEEEE
T ss_pred CCCEEEEEcCCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEEEE
Confidence 5689999999999999999987 3569999999999999999998653 2379999999987532 338999999
Q ss_pred cCCCCCCCC-Cc-hHHHHHHHHhhcC
Q 028214 120 NPPFGTRKK-GV-DMDFLSMALKVAS 143 (212)
Q Consensus 120 nppy~~~~~-~~-~~~~l~~~~~~~~ 143 (212)
|++.+.... .. ...+++.+.+.++
T Consensus 188 d~~~~~~~~~~l~t~~~l~~~~~~Lk 213 (314)
T 2b2c_A 188 DSSDPVGPAESLFGQSYYELLRDALK 213 (314)
T ss_dssp CCC-------------HHHHHHHHEE
T ss_pred cCCCCCCcchhhhHHHHHHHHHhhcC
Confidence 986432211 11 1467777777765
No 237
>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*
Probab=99.16 E-value=1e-10 Score=95.11 Aligned_cols=96 Identities=17% Similarity=0.161 Sum_probs=74.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh--c----CCceEEEEcccccCcC--CCcccEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD--L----ELDIDFVQCDIRNLEW--RGHVDTVV 118 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~--~----~~~v~~~~~d~~~~~~--~~~~D~i~ 118 (212)
.+++|||+|||+|.++..+++. +..+|+++|+|+.+++.|++++.. . ..+++++++|+.++.. ..+||+|+
T Consensus 77 ~~~~VLdiG~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~Ii 156 (314)
T 1uir_A 77 EPKRVLIVGGGEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDVVI 156 (314)
T ss_dssp CCCEEEEEECTTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEEEE
T ss_pred CCCeEEEEcCCcCHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccEEE
Confidence 5689999999999999999987 456999999999999999998764 1 2379999999987532 34899999
Q ss_pred EcCCCCC---CCC-C-chHHHHHHHHhhcC
Q 028214 119 MNPPFGT---RKK-G-VDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~---~~~-~-~~~~~l~~~~~~~~ 143 (212)
+|++.+. ... . ....+++.+.+.++
T Consensus 157 ~d~~~~~~~~~~~~~l~~~~~l~~~~~~Lk 186 (314)
T 1uir_A 157 IDLTDPVGEDNPARLLYTVEFYRLVKAHLN 186 (314)
T ss_dssp EECCCCBSTTCGGGGGSSHHHHHHHHHTEE
T ss_pred ECCCCcccccCcchhccHHHHHHHHHHhcC
Confidence 9998754 110 1 13567777777765
No 238
>2qe6_A Uncharacterized protein TFU_2867; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: NEP SAM; 1.95A {Thermobifida fusca}
Probab=99.15 E-value=1e-09 Score=87.51 Aligned_cols=95 Identities=15% Similarity=0.119 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCc---ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc-----------CC-
Q 028214 48 SNKVVADFGCGC---GTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE-----------WR- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~---G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-----------~~- 111 (212)
...+|||+|||+ |.++..+.+. +..+|+++|+|+.+++.|++++...+ +++++++|+.+.. ..
T Consensus 77 ~~~~vLDlGcG~pt~G~~~~~~~~~~p~~~v~~vD~sp~~l~~Ar~~~~~~~-~v~~~~~D~~~~~~~~~~~~~~~~~d~ 155 (274)
T 2qe6_A 77 GISQFLDLGSGLPTVQNTHEVAQSVNPDARVVYVDIDPMVLTHGRALLAKDP-NTAVFTADVRDPEYILNHPDVRRMIDF 155 (274)
T ss_dssp CCCEEEEETCCSCCSSCHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHTTCT-TEEEEECCTTCHHHHHHSHHHHHHCCT
T ss_pred CCCEEEEECCCCCCCChHHHHHHHhCCCCEEEEEECChHHHHHHHHhcCCCC-CeEEEEeeCCCchhhhccchhhccCCC
Confidence 457999999999 9887666654 34699999999999999999885432 7999999997632 11
Q ss_pred CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 112 GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 112 ~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+||+|+++..+|+..+......++++.+.++
T Consensus 156 ~~~d~v~~~~vlh~~~d~~~~~~l~~~~~~L~ 187 (274)
T 2qe6_A 156 SRPAAIMLVGMLHYLSPDVVDRVVGAYRDALA 187 (274)
T ss_dssp TSCCEEEETTTGGGSCTTTHHHHHHHHHHHSC
T ss_pred CCCEEEEEechhhhCCcHHHHHHHHHHHHhCC
Confidence 27999999999998866556677777777654
No 239
>2g72_A Phenylethanolamine N-methyltransferase; HET: SAM F21; 2.00A {Homo sapiens} SCOP: c.66.1.15 PDB: 1yz3_A* 2an4_A* 2an5_A* 2g70_A* 2g71_A* 2an3_A* 2g8n_A* 2ony_A* 3hcb_A* 3hcc_A* 3hcd_A* 3hcf_A* 3kpj_A* 3kpu_A* 3kpv_A* 3kpw_A* 3kpy_A* 3kqm_A* 3kqo_A* 3kqp_A* ...
Probab=99.15 E-value=3e-09 Score=85.11 Aligned_cols=97 Identities=10% Similarity=-0.006 Sum_probs=70.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----------------C--------------
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----------------E-------------- 95 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----------------~-------------- 95 (212)
.++.+|||+|||+|.....++..+..+|+|+|+++.+++.|+++++.. +
T Consensus 70 ~~~~~vLDiGcG~G~~~~l~~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 149 (289)
T 2g72_A 70 VSGRTLIDIGSGPTVYQLLSACSHFEDITMTDFLEVNRQELGRWLQEEPGAFNWSMYSQHACLIEGKGECWQDKERQLRA 149 (289)
T ss_dssp SCCSEEEEETCTTCCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHTTCTTCCCCHHHHHHHHHHHCSCCCHHHHHHHHHH
T ss_pred CCCCeEEEECCCcChHHHHhhccCCCeEEEeCCCHHHHHHHHHHHhhCcccccchhhhhHHHHhcCcccchhhhHHHHHh
Confidence 467899999999999666555544559999999999999998865421 1
Q ss_pred CceEEEEccccc-CcCC------CcccEEEEcCCCCCCCCC--chHHHHHHHHhhcC
Q 028214 96 LDIDFVQCDIRN-LEWR------GHVDTVVMNPPFGTRKKG--VDMDFLSMALKVAS 143 (212)
Q Consensus 96 ~~v~~~~~d~~~-~~~~------~~~D~i~~nppy~~~~~~--~~~~~l~~~~~~~~ 143 (212)
..++++++|+.+ .+.. .+||+|+++..+++.... .....++++.+.++
T Consensus 150 ~~~~~~~~D~~~~~~~~~~~~~~~~fD~V~~~~~l~~~~~~~~~~~~~l~~~~r~Lk 206 (289)
T 2g72_A 150 RVKRVLPIDVHQPQPLGAGSPAPLPADALVSAFCLEAVSPDLASFQRALDHITTLLR 206 (289)
T ss_dssp HEEEEECCCTTSSSTTCSSCSSCSSEEEEEEESCHHHHCSSHHHHHHHHHHHHTTEE
T ss_pred hhceEEecccCCCCCccccccCCCCCCEEEehhhhhhhcCCHHHHHHHHHHHHHhcC
Confidence 015678889987 4321 259999999888764333 34467777777765
No 240
>3mcz_A O-methyltransferase; adomet_mtases, S-adenosylmethionine-dependent methyltransfer structural genomics, PSI-2; HET: MSE; 1.90A {Burkholderia thailandensis}
Probab=99.15 E-value=3e-10 Score=93.40 Aligned_cols=94 Identities=16% Similarity=0.162 Sum_probs=78.4
Q ss_pred CCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCc--CCCcccEEEEcCCC
Q 028214 49 NKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLE--WRGHVDTVVMNPPF 123 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~--~~~~~D~i~~nppy 123 (212)
+.+|||+|||+|.++..+++. +..+++++|+ +.+++.++++....+. ++++..+|+.+.+ ....||+|++...+
T Consensus 180 ~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~D~v~~~~vl 258 (352)
T 3mcz_A 180 ARTVIDLAGGHGTYLAQVLRRHPQLTGQIWDL-PTTRDAARKTIHAHDLGGRVEFFEKNLLDARNFEGGAADVVMLNDCL 258 (352)
T ss_dssp CCEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCGGGEEEEECCTTCGGGGTTCCEEEEEEESCG
T ss_pred CCEEEEeCCCcCHHHHHHHHhCCCCeEEEEEC-HHHHHHHHHHHHhcCCCCceEEEeCCcccCcccCCCCccEEEEeccc
Confidence 789999999999999999975 4568999999 8899999999988776 6999999999876 55579999999888
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
|+..+......++++.+..+
T Consensus 259 h~~~~~~~~~~l~~~~~~L~ 278 (352)
T 3mcz_A 259 HYFDAREAREVIGHAAGLVK 278 (352)
T ss_dssp GGSCHHHHHHHHHHHHHTEE
T ss_pred ccCCHHHHHHHHHHHHHHcC
Confidence 87654444677777776654
No 241
>3dp7_A SAM-dependent methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research; 2.33A {Bacteroides vulgatus}
Probab=99.15 E-value=7.3e-10 Score=91.72 Aligned_cols=95 Identities=16% Similarity=0.177 Sum_probs=77.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccC--cCCCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNL--EWRGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~--~~~~~~D~i~~npp 122 (212)
...+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...+. ++++..+|+.+. +.+.+||+|++.-.
T Consensus 179 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~p~~~D~v~~~~v 257 (363)
T 3dp7_A 179 HPKRLLDIGGNTGKWATQCVQYNKEVEVTIVDL-PQQLEMMRKQTAGLSGSERIHGHGANLLDRDVPFPTGFDAVWMSQF 257 (363)
T ss_dssp CCSEEEEESCTTCHHHHHHHHHSTTCEEEEEEC-HHHHHHHHHHHTTCTTGGGEEEEECCCCSSSCCCCCCCSEEEEESC
T ss_pred CCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeC-HHHHHHHHHHHHhcCcccceEEEEccccccCCCCCCCcCEEEEech
Confidence 5689999999999999999865 4568999999 9999999999987775 799999999986 23358999999888
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
+|...+......++++.+..+
T Consensus 258 lh~~~~~~~~~~l~~~~~~L~ 278 (363)
T 3dp7_A 258 LDCFSEEEVISILTRVAQSIG 278 (363)
T ss_dssp STTSCHHHHHHHHHHHHHHCC
T ss_pred hhhCCHHHHHHHHHHHHHhcC
Confidence 876554444566777766654
No 242
>3gwz_A MMCR; methyltransferase, mitomycin, S-adenosyl methionine, transferase; HET: MSE SAH; 1.91A {Streptomyces lavendulae} PDB: 3gxo_A*
Probab=99.14 E-value=1.1e-09 Score=90.93 Aligned_cols=102 Identities=14% Similarity=0.066 Sum_probs=80.2
Q ss_pred HHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccE
Q 028214 40 AENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDT 116 (212)
Q Consensus 40 ~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~ 116 (212)
....+...+..+|||+|||+|.++..+++. +..+++++|+ +.+++.|++++...+. ++++..+|+.+.. +..||+
T Consensus 194 l~~~~~~~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~l~~~v~~~~~d~~~~~-p~~~D~ 271 (369)
T 3gwz_A 194 VAAAYDFSGAATAVDIGGGRGSLMAAVLDAFPGLRGTLLER-PPVAEEARELLTGRGLADRCEILPGDFFETI-PDGADV 271 (369)
T ss_dssp HHHHSCCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTTCC-CSSCSE
T ss_pred HHHhCCCccCcEEEEeCCCccHHHHHHHHHCCCCeEEEEcC-HHHHHHHHHhhhhcCcCCceEEeccCCCCCC-CCCceE
Confidence 333434456789999999999999999976 3458999999 9999999999987765 7999999998433 338999
Q ss_pred EEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 117 VVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 117 i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|++...++...+......++++.+..+
T Consensus 272 v~~~~vlh~~~d~~~~~~L~~~~~~L~ 298 (369)
T 3gwz_A 272 YLIKHVLHDWDDDDVVRILRRIATAMK 298 (369)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHTTCC
T ss_pred EEhhhhhccCCHHHHHHHHHHHHHHcC
Confidence 999988877655444467777776654
No 243
>2qfm_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC; HET: SPD MTA; 1.80A {Homo sapiens} PDB: 3c6k_A* 3c6m_A*
Probab=99.13 E-value=2.3e-10 Score=93.93 Aligned_cols=103 Identities=17% Similarity=0.121 Sum_probs=76.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC---------CceEEEEcccccCcC-----CCc
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE---------LDIDFVQCDIRNLEW-----RGH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~---------~~v~~~~~d~~~~~~-----~~~ 113 (212)
.+++||++|||+|.+++++++++..+|+++|+|+.+++.|++++...+ .+++++.+|+.++.. ..+
T Consensus 188 ~pkrVL~IGgG~G~~arellk~~~~~Vt~VEID~~vie~Ar~~~~~l~~~~l~dp~~~rv~vi~~Da~~~L~~~~~~~~~ 267 (364)
T 2qfm_A 188 TGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGRE 267 (364)
T ss_dssp TTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTCC
T ss_pred CCCEEEEEECChhHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhccccccccCCCcEEEEECcHHHHHHhhhccCCC
Confidence 578999999999999999998877799999999999999999976321 158999999998764 248
Q ss_pred ccEEEEcCCCCC---CC-CCchHHHHHHH----HhhcC-ceEEEEe
Q 028214 114 VDTVVMNPPFGT---RK-KGVDMDFLSMA----LKVAS-QAVYSLH 150 (212)
Q Consensus 114 ~D~i~~nppy~~---~~-~~~~~~~l~~~----~~~~~-~~~~~~~ 150 (212)
||+|++|||..+ .. .-....+++.+ .+.+. ++++++.
T Consensus 268 fDvII~D~~d~P~~~~p~~L~t~eFy~~~~~~~~~~L~pgGilv~q 313 (364)
T 2qfm_A 268 FDYVINDLTAVPISTSPEEDSTWEFLRLILDLSMKVLKQDGKYFTQ 313 (364)
T ss_dssp EEEEEEECCSSCCCCC----CHHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred ceEEEECCCCcccCcCchhhhHHHHHHHHHHHHHhhCCCCcEEEEE
Confidence 999999997511 11 11334666665 44443 3444433
No 244
>3dou_A Ribosomal RNA large subunit methyltransferase J; cell division, structural genomics, protein structure initiative, PSI; HET: SAM; 1.45A {Thermoplasma volcanium} SCOP: c.66.1.0
Probab=99.12 E-value=2e-09 Score=81.27 Aligned_cols=68 Identities=25% Similarity=0.369 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC--------C----Ccc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW--------R----GHV 114 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~--------~----~~~ 114 (212)
.++.+|||+|||+|..+..+++. ..+|+|+|+++.. . -.+++++++|+.+... . .+|
T Consensus 24 ~~g~~VLDlG~G~G~~s~~la~~-~~~V~gvD~~~~~------~----~~~v~~~~~D~~~~~~~~~~~~~~~~~~~~~~ 92 (191)
T 3dou_A 24 RKGDAVIEIGSSPGGWTQVLNSL-ARKIISIDLQEME------E----IAGVRFIRCDIFKETIFDDIDRALREEGIEKV 92 (191)
T ss_dssp CTTCEEEEESCTTCHHHHHHTTT-CSEEEEEESSCCC------C----CTTCEEEECCTTSSSHHHHHHHHHHHHTCSSE
T ss_pred CCCCEEEEEeecCCHHHHHHHHc-CCcEEEEeccccc------c----CCCeEEEEccccCHHHHHHHHHHhhcccCCcc
Confidence 46789999999999999999987 5599999999741 0 1168999999987641 0 289
Q ss_pred cEEEEcCCCCC
Q 028214 115 DTVVMNPPFGT 125 (212)
Q Consensus 115 D~i~~nppy~~ 125 (212)
|+|++|++...
T Consensus 93 D~Vlsd~~~~~ 103 (191)
T 3dou_A 93 DDVVSDAMAKV 103 (191)
T ss_dssp EEEEECCCCCC
T ss_pred eEEecCCCcCC
Confidence 99999997654
No 245
>1x19_A CRTF-related protein; methyltransferase, bacteriochllochlorophyll, BCHU, SAM, SAH, adenosylmethyonine, S-adenosylhomocysteine, ADO-Met; 2.27A {Chlorobium tepidum} PDB: 1x1a_A* 1x1b_A* 1x1c_A* 1x1d_A*
Probab=99.12 E-value=9.9e-10 Score=90.66 Aligned_cols=100 Identities=17% Similarity=0.181 Sum_probs=79.8
Q ss_pred hhcCCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEE
Q 028214 42 NSFGDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVV 118 (212)
Q Consensus 42 ~~~~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~ 118 (212)
..+...++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++++...+. +++++.+|+.+.+.+ .+|+|+
T Consensus 184 ~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~-~~D~v~ 261 (359)
T 1x19_A 184 EEAKLDGVKKMIDVGGGIGDISAAMLKHFPELDSTILNL-PGAIDLVNENAAEKGVADRMRGIAVDIYKESYP-EADAVL 261 (359)
T ss_dssp HHCCCTTCCEEEEESCTTCHHHHHHHHHCTTCEEEEEEC-GGGHHHHHHHHHHTTCTTTEEEEECCTTTSCCC-CCSEEE
T ss_pred HhcCCCCCCEEEEECCcccHHHHHHHHHCCCCeEEEEec-HHHHHHHHHHHHhcCCCCCEEEEeCccccCCCC-CCCEEE
Confidence 33344567899999999999999999763 458999999 9999999999987765 599999999987554 459999
Q ss_pred EcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 119 MNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 119 ~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
+...+++..+......++++.+..+
T Consensus 262 ~~~vlh~~~d~~~~~~l~~~~~~L~ 286 (359)
T 1x19_A 262 FCRILYSANEQLSTIMCKKAFDAMR 286 (359)
T ss_dssp EESCGGGSCHHHHHHHHHHHHTTCC
T ss_pred EechhccCCHHHHHHHHHHHHHhcC
Confidence 9988876654445567777776654
No 246
>1tw3_A COMT, carminomycin 4-O-methyltransferase; anthracycline, methylate, tailoring enzyme, polyketide, S-adenosyl-L-homocystein; HET: SAH ERT; 2.35A {Streptomyces peucetius} SCOP: a.4.5.29 c.66.1.12 PDB: 1tw2_A*
Probab=99.12 E-value=7.3e-10 Score=91.36 Aligned_cols=97 Identities=15% Similarity=0.152 Sum_probs=77.2
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcC
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNP 121 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~np 121 (212)
...++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.|++++...+. +++++++|+.+..+ ..||+|+++.
T Consensus 180 ~~~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~D~v~~~~ 257 (360)
T 1tw3_A 180 DWTNVRHVLDVGGGKGGFAAAIARRAPHVSATVLEM-AGTVDTARSYLKDEGLSDRVDVVEGDFFEPLP-RKADAIILSF 257 (360)
T ss_dssp CCTTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-TTHHHHHHHHHHHTTCTTTEEEEECCTTSCCS-SCEEEEEEES
T ss_pred CCccCcEEEEeCCcCcHHHHHHHHhCCCCEEEEecC-HHHHHHHHHHHHhcCCCCceEEEeCCCCCCCC-CCccEEEEcc
Confidence 33467899999999999999999764 458999999 9999999999988776 79999999986332 3699999999
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+++..+.....+++++.+..+
T Consensus 258 vl~~~~~~~~~~~l~~~~~~L~ 279 (360)
T 1tw3_A 258 VLLNWPDHDAVRILTRCAEALE 279 (360)
T ss_dssp CGGGSCHHHHHHHHHHHHHTEE
T ss_pred cccCCCHHHHHHHHHHHHHhcC
Confidence 8876544333467777777654
No 247
>3mq2_A 16S rRNA methyltransferase; methyltranferase, ribosomal, antibiotic resistance, aminoglycoside, S-adenosyl-L-methionine; HET: SAH; 1.69A {Streptomyces SP}
Probab=99.10 E-value=2.1e-10 Score=88.01 Aligned_cols=97 Identities=21% Similarity=0.233 Sum_probs=68.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHH----HHHHhhcCC-ceEEEEcccccCcCCCcccEEEEc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELA----SENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMN 120 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a----~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~n 120 (212)
.++.+|||+|||+|.++..+++.. ..+|+|+|+++.+++.+ +++....+. +++++++|+.+++.....|.|+..
T Consensus 26 ~~~~~vLDiGcG~G~~~~~la~~~p~~~v~gvD~s~~~l~~~~~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~d~v~~~ 105 (218)
T 3mq2_A 26 QYDDVVLDVGTGDGKHPYKVARQNPSRLVVALDADKSRMEKISAKAAAKPAKGGLPNLLYLWATAERLPPLSGVGELHVL 105 (218)
T ss_dssp TSSEEEEEESCTTCHHHHHHHHHCTTEEEEEEESCGGGGHHHHHHHTSCGGGTCCTTEEEEECCSTTCCSCCCEEEEEEE
T ss_pred cCCCEEEEecCCCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhhhhcCCCceEEEecchhhCCCCCCCCEEEEE
Confidence 377899999999999999999764 46999999999988754 333334444 799999999998776522888776
Q ss_pred CCCCCCC---CCchHHHHHHHHhhcC
Q 028214 121 PPFGTRK---KGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~---~~~~~~~l~~~~~~~~ 143 (212)
.++.... -.....+++++.+.++
T Consensus 106 ~~~~~~~~~~~~~~~~~l~~~~~~Lk 131 (218)
T 3mq2_A 106 MPWGSLLRGVLGSSPEMLRGMAAVCR 131 (218)
T ss_dssp SCCHHHHHHHHTSSSHHHHHHHHTEE
T ss_pred ccchhhhhhhhccHHHHHHHHHHHcC
Confidence 6653210 0001345566655544
No 248
>3i53_A O-methyltransferase; CO-complex, rossmann-like fold; HET: SAH; 2.08A {Streptomyces carzinostaticus subsp} PDB: 3i58_A* 3i5u_A* 3i64_A*
Probab=99.09 E-value=7.8e-10 Score=90.31 Aligned_cols=94 Identities=16% Similarity=0.093 Sum_probs=74.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
+..+|||+|||+|..+..+++. +..+++++|+ +.+++.|++++...+. ++++..+|+.+. .+..||+|++.-.+|
T Consensus 169 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~-~p~~~D~v~~~~vlh 246 (332)
T 3i53_A 169 ALGHVVDVGGGSGGLLSALLTAHEDLSGTVLDL-QGPASAAHRRFLDTGLSGRAQVVVGSFFDP-LPAGAGGYVLSAVLH 246 (332)
T ss_dssp GGSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECCTTSC-CCCSCSEEEEESCGG
T ss_pred CCCEEEEeCCChhHHHHHHHHHCCCCeEEEecC-HHHHHHHHHhhhhcCcCcCeEEecCCCCCC-CCCCCcEEEEehhhc
Confidence 4579999999999999999865 4568999999 9999999999987765 799999999743 333899999998888
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
+..+......++++.+..+
T Consensus 247 ~~~~~~~~~~l~~~~~~L~ 265 (332)
T 3i53_A 247 DWDDLSAVAILRRCAEAAG 265 (332)
T ss_dssp GSCHHHHHHHHHHHHHHHT
T ss_pred cCCHHHHHHHHHHHHHhcC
Confidence 7655444566666665543
No 249
>4gqb_A Protein arginine N-methyltransferase 5; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens} PDB: 4g56_A*
Probab=99.09 E-value=8.6e-11 Score=103.04 Aligned_cols=75 Identities=20% Similarity=0.218 Sum_probs=60.8
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc---CCC--eEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL---GAD--QVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVM 119 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~---~~~--~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~ 119 (212)
.++..|+|+|||+|.++..+++. +.. +|+|+|.|+ +...|++..+.++. +|+++++|++++..+.++|+||+
T Consensus 356 ~~~~vVldVGaGrGpLv~~al~A~a~~~~~vkVyAVEknp-~A~~a~~~v~~N~~~dkVtVI~gd~eev~LPEKVDIIVS 434 (637)
T 4gqb_A 356 TNVQVLMVLGAGRGPLVNASLRAAKQADRRIKLYAVEKNP-NAVVTLENWQFEEWGSQVTVVSSDMREWVAPEKADIIVS 434 (637)
T ss_dssp TCEEEEEEESCTTSHHHHHHHHHHHHTTCEEEEEEEESCH-HHHHHHHHHHHHTTGGGEEEEESCTTTCCCSSCEEEEEC
T ss_pred CCCcEEEEECCCCcHHHHHHHHHHHhcCCCcEEEEEECCH-HHHHHHHHHHhccCCCeEEEEeCcceeccCCcccCEEEE
Confidence 34568999999999985555543 332 789999998 56678888888887 79999999999988889999998
Q ss_pred cCC
Q 028214 120 NPP 122 (212)
Q Consensus 120 npp 122 (212)
-..
T Consensus 435 EwM 437 (637)
T 4gqb_A 435 ELL 437 (637)
T ss_dssp CCC
T ss_pred EcC
Confidence 654
No 250
>1af7_A Chemotaxis receptor methyltransferase CHER; chemotaxis receptor methylation; HET: SAH; 2.00A {Salmonella typhimurium} SCOP: a.58.1.1 c.66.1.8 PDB: 1bc5_A*
Probab=99.08 E-value=4.1e-10 Score=89.68 Aligned_cols=109 Identities=16% Similarity=0.171 Sum_probs=74.0
Q ss_pred CCCEEEEEcCCcCh----HHHHHHHc-C----CCeEEEEeCChHHHHHHHHHHhh-----------------------cC
Q 028214 48 SNKVVADFGCGCGT----LGAAATLL-G----ADQVIAIDIDSDSLELASENAAD-----------------------LE 95 (212)
Q Consensus 48 ~~~~vlDlg~G~G~----~~~~~~~~-~----~~~v~~~D~~~~~~~~a~~~~~~-----------------------~~ 95 (212)
++.+|+|+|||||. +++.++.. + ..+|+|+|+|+.+++.|++++-. .+
T Consensus 105 ~~~rIld~GCgTGee~ysiAi~L~e~~~~~~~~~~I~atDis~~~L~~Ar~~~y~~~~~~~~~~~~~~~~f~~~~~~~~~ 184 (274)
T 1af7_A 105 GEYRVWSAAASTGEEPYSIAITLADALGMAPGRWKVFASDIDTEVLEKARSGIYRLSELKTLSPQQLQRYFMRGTGPHEG 184 (274)
T ss_dssp SCEEEEESCCTTTHHHHHHHHHHHHHHCSCTTSEEEEEEESCHHHHHHHHHTEEEGGGGTTSCHHHHHHHEEECCTTSCS
T ss_pred CCcEEEEeeccCChhHHHHHHHHHHhcccCCCCeEEEEEECCHHHHHHHHhcCCchhhhhcCCHHHHHHHhhccccCCCC
Confidence 45799999999998 55556654 3 24899999999999999987510 11
Q ss_pred ---------CceEEEEcccccCcCC--CcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEEEEecCchHHHHHHHHHh
Q 028214 96 ---------LDIDFVQCDIRNLEWR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVYSLHKTSTREHVKKAALR 164 (212)
Q Consensus 96 ---------~~v~~~~~d~~~~~~~--~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~r 164 (212)
.+++|.++|+.+.+.+ .+||+|+|.-.+++..+ .....+.....+
T Consensus 185 ~~~v~~~lr~~V~F~~~dl~~~~~~~~~~fDlI~crnvliyf~~------------------------~~~~~vl~~~~~ 240 (274)
T 1af7_A 185 LVRVRQELANYVEFSSVNLLEKQYNVPGPFDAIFCRNVMIYFDK------------------------TTQEDILRRFVP 240 (274)
T ss_dssp EEEECHHHHTTEEEEECCTTCSSCCCCCCEEEEEECSSGGGSCH------------------------HHHHHHHHHHGG
T ss_pred ceeechhhcccCeEEecccCCCCCCcCCCeeEEEECCchHhCCH------------------------HHHHHHHHHHHH
Confidence 1589999999985433 48999999655443322 223344444446
Q ss_pred hcCCcceeEEEEEeecC
Q 028214 165 DFNASSAEVLCELRYDV 181 (212)
Q Consensus 165 ~l~~~~~~~~~~~~~~~ 181 (212)
.|+ ++|.++..++..+
T Consensus 241 ~L~-pgG~L~lg~sE~~ 256 (274)
T 1af7_A 241 LLK-PDGLLFAGHSENF 256 (274)
T ss_dssp GEE-EEEEEEECTTCCC
T ss_pred HhC-CCcEEEEEecccc
Confidence 666 7777766555443
No 251
>3hp7_A Hemolysin, putative; structural genomics, APC64019, PSI-2, protein STR initiative, midwest center for structural genomics, MCSG; HET: MSE; 1.53A {Streptococcus thermophilus}
Probab=99.07 E-value=5.3e-10 Score=89.58 Aligned_cols=91 Identities=18% Similarity=0.183 Sum_probs=62.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEE-EEcccccCcC---CC-cccEEEEcC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDF-VQCDIRNLEW---RG-HVDTVVMNP 121 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~-~~~d~~~~~~---~~-~~D~i~~np 121 (212)
.++.++||+|||||.++..+++.+..+|+|+|+++.|++.+.++-. ++.. ...|+..+.. +. +||+|++|-
T Consensus 84 ~~g~~vLDiGcGTG~~t~~L~~~ga~~V~aVDvs~~mL~~a~r~~~----rv~~~~~~ni~~l~~~~l~~~~fD~v~~d~ 159 (291)
T 3hp7_A 84 VEDMITIDIGASTGGFTDVMLQNGAKLVYAVDVGTNQLVWKLRQDD----RVRSMEQYNFRYAEPVDFTEGLPSFASIDV 159 (291)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSSSCSCHHHHTCT----TEEEECSCCGGGCCGGGCTTCCCSEEEECC
T ss_pred ccccEEEecCCCccHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCc----ccceecccCceecchhhCCCCCCCEEEEEe
Confidence 4678999999999999999998887899999999999988544321 2222 2334443332 12 599999999
Q ss_pred CCCCCCCCchHHHHHHHHhhcC
Q 028214 122 PFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 122 py~~~~~~~~~~~l~~~~~~~~ 143 (212)
.|+.. ......+.+.++.++
T Consensus 160 sf~sl--~~vL~e~~rvLkpGG 179 (291)
T 3hp7_A 160 SFISL--NLILPALAKILVDGG 179 (291)
T ss_dssp SSSCG--GGTHHHHHHHSCTTC
T ss_pred eHhhH--HHHHHHHHHHcCcCC
Confidence 98754 333444555555444
No 252
>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33
Probab=99.06 E-value=2.7e-09 Score=84.34 Aligned_cols=72 Identities=17% Similarity=0.273 Sum_probs=61.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPP 122 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~npp 122 (212)
.++.+|||+|||+|.++..+++. +..+|+|+|+++.+++.|+++.. ++.+..+|+.+++... +||+|+++.+
T Consensus 84 ~~~~~vLdiG~G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~----~~~~~~~d~~~~~~~~~~fD~v~~~~~ 157 (269)
T 1p91_A 84 DKATAVLDIGCGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYP----QVTFCVASSHRLPFSDTSMDAIIRIYA 157 (269)
T ss_dssp TTCCEEEEETCTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCT----TSEEEECCTTSCSBCTTCEEEEEEESC
T ss_pred CCCCEEEEECCCCCHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCC----CcEEEEcchhhCCCCCCceeEEEEeCC
Confidence 36789999999999999999976 34589999999999999988753 5789999998877554 8999998654
No 253
>2ip2_A Probable phenazine-specific methyltransferase; pyocyanin, phenazine-1-carboxy PHZM; 1.80A {Pseudomonas aeruginosa}
Probab=99.06 E-value=6.9e-10 Score=90.62 Aligned_cols=92 Identities=20% Similarity=0.276 Sum_probs=73.5
Q ss_pred CEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 50 KVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
.+|||+|||+|..+..+++. +..+++++|+ +.+++.+++++...+. +++++.+|+.+ +.+.+||+|++...+|+.
T Consensus 169 ~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~~~~~~~~~~v~~~~~d~~~-~~~~~~D~v~~~~vl~~~ 246 (334)
T 2ip2_A 169 RSFVDVGGGSGELTKAILQAEPSARGVMLDR-EGSLGVARDNLSSLLAGERVSLVGGDMLQ-EVPSNGDIYLLSRIIGDL 246 (334)
T ss_dssp CEEEEETCTTCHHHHHHHHHCTTCEEEEEEC-TTCTHHHHHHTHHHHHTTSEEEEESCTTT-CCCSSCSEEEEESCGGGC
T ss_pred CEEEEeCCCchHHHHHHHHHCCCCEEEEeCc-HHHHHHHHHHHhhcCCCCcEEEecCCCCC-CCCCCCCEEEEchhccCC
Confidence 89999999999999999965 3458999999 9999999998876543 69999999987 334579999999888765
Q ss_pred CCCchHHHHHHHHhhcC
Q 028214 127 KKGVDMDFLSMALKVAS 143 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~~ 143 (212)
.+......++++.+..+
T Consensus 247 ~~~~~~~~l~~~~~~L~ 263 (334)
T 2ip2_A 247 DEAASLRLLGNCREAMA 263 (334)
T ss_dssp CHHHHHHHHHHHHHHSC
T ss_pred CHHHHHHHHHHHHHhcC
Confidence 44443466776666554
No 254
>2cmg_A Spermidine synthase; transferase, putrescine aminopropyltransferase, spermidine biosynthesis, polyamine biosynthesis, SPEE; 2.0A {Helicobacter pylori} PDB: 2cmh_A
Probab=99.06 E-value=8e-10 Score=87.54 Aligned_cols=92 Identities=9% Similarity=-0.058 Sum_probs=73.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----CCceEEEEcccccCcCCCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----ELDIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~~~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
.+++|||+|||+|.++..+++++ .+|+++|+|+.+++.|++++... ..+++++.+|..++. .+||+|++|.+
T Consensus 72 ~~~~VL~iG~G~G~~~~~ll~~~-~~v~~veid~~~i~~ar~~~~~~~~~~~~~rv~~~~~D~~~~~--~~fD~Ii~d~~ 148 (262)
T 2cmg_A 72 ELKEVLIVDGFDLELAHQLFKYD-THIDFVQADEKILDSFISFFPHFHEVKNNKNFTHAKQLLDLDI--KKYDLIFCLQE 148 (262)
T ss_dssp CCCEEEEESSCCHHHHHHHTTSS-CEEEEECSCHHHHGGGTTTSTTHHHHHTCTTEEEESSGGGSCC--CCEEEEEESSC
T ss_pred CCCEEEEEeCCcCHHHHHHHhCC-CEEEEEECCHHHHHHHHHHHHhhccccCCCeEEEEechHHHHH--hhCCEEEECCC
Confidence 56899999999999999999876 89999999999999999876431 227999999998876 58999999964
Q ss_pred CCCCCCCchHHHHHHHHhhcC-ceEEEE
Q 028214 123 FGTRKKGVDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~-~~~~~~ 149 (212)
+ ...+++.+.+.++ ++++++
T Consensus 149 -----d--p~~~~~~~~~~L~pgG~lv~ 169 (262)
T 2cmg_A 149 -----P--DIHRIDGLKRMLKEDGVFIS 169 (262)
T ss_dssp -----C--CHHHHHHHHTTEEEEEEEEE
T ss_pred -----C--hHHHHHHHHHhcCCCcEEEE
Confidence 1 1247787777765 344443
No 255
>3cc8_A Putative methyltransferase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS transferase; 1.64A {Bacillus cereus}
Probab=99.05 E-value=1.3e-09 Score=83.59 Aligned_cols=88 Identities=24% Similarity=0.289 Sum_probs=70.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC--cCC-CcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL--EWR-GHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~--~~~-~~~D~i~~nppy 123 (212)
.++.+|||+|||+|.++..+++.+ .+++++|+++.+++.++++. .+++++|+.+. +.. .+||+|+++..+
T Consensus 31 ~~~~~vLdiG~G~G~~~~~l~~~~-~~~~~~D~~~~~~~~~~~~~------~~~~~~d~~~~~~~~~~~~fD~v~~~~~l 103 (230)
T 3cc8_A 31 KEWKEVLDIGCSSGALGAAIKENG-TRVSGIEAFPEAAEQAKEKL------DHVVLGDIETMDMPYEEEQFDCVIFGDVL 103 (230)
T ss_dssp TTCSEEEEETCTTSHHHHHHHTTT-CEEEEEESSHHHHHHHHTTS------SEEEESCTTTCCCCSCTTCEEEEEEESCG
T ss_pred cCCCcEEEeCCCCCHHHHHHHhcC-CeEEEEeCCHHHHHHHHHhC------CcEEEcchhhcCCCCCCCccCEEEECChh
Confidence 477899999999999999999875 69999999999999998875 36889998763 333 389999999888
Q ss_pred CCCCCCchHHHHHHHHhhcC
Q 028214 124 GTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 124 ~~~~~~~~~~~l~~~~~~~~ 143 (212)
++... ...+++++.+..+
T Consensus 104 ~~~~~--~~~~l~~~~~~L~ 121 (230)
T 3cc8_A 104 EHLFD--PWAVIEKVKPYIK 121 (230)
T ss_dssp GGSSC--HHHHHHHTGGGEE
T ss_pred hhcCC--HHHHHHHHHHHcC
Confidence 77642 2466777776654
No 256
>2bm8_A Cephalosporin hydroxylase CMCI; cephamycin biosynthesis; 2.5A {Streptomyces clavuligerus} SCOP: c.66.1.50 PDB: 2bm9_A* 2br5_A* 2br4_A* 2br3_A*
Probab=99.03 E-value=1.3e-09 Score=84.88 Aligned_cols=93 Identities=18% Similarity=0.200 Sum_probs=68.9
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-----CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC---cC-CC-cccEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-----GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL---EW-RG-HVDTV 117 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-----~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~---~~-~~-~~D~i 117 (212)
++.+|||+|||+|..++.+++. +..+|+|+|+++.+++.|+. . ..+++++++|+.+. +. .. +||+|
T Consensus 81 ~~~~VLDiG~GtG~~t~~la~~~~~~~~~~~V~gvD~s~~~l~~a~~-~---~~~v~~~~gD~~~~~~l~~~~~~~fD~I 156 (236)
T 2bm8_A 81 RPRTIVELGVYNGGSLAWFRDLTKIMGIDCQVIGIDRDLSRCQIPAS-D---MENITLHQGDCSDLTTFEHLREMAHPLI 156 (236)
T ss_dssp CCSEEEEECCTTSHHHHHHHHHHHHTTCCCEEEEEESCCTTCCCCGG-G---CTTEEEEECCSSCSGGGGGGSSSCSSEE
T ss_pred CCCEEEEEeCCCCHHHHHHHHhhhhcCCCCEEEEEeCChHHHHHHhc-c---CCceEEEECcchhHHHHHhhccCCCCEE
Confidence 5689999999999999999875 34699999999999888872 1 23799999999885 32 23 69999
Q ss_pred EEcCCCCCCCCCchHHHHHHHHh-hcC-ceEEEE
Q 028214 118 VMNPPFGTRKKGVDMDFLSMALK-VAS-QAVYSL 149 (212)
Q Consensus 118 ~~nppy~~~~~~~~~~~l~~~~~-~~~-~~~~~~ 149 (212)
+++.. + ......+.++.+ .++ ++.+++
T Consensus 157 ~~d~~-~----~~~~~~l~~~~r~~LkpGG~lv~ 185 (236)
T 2bm8_A 157 FIDNA-H----ANTFNIMKWAVDHLLEEGDYFII 185 (236)
T ss_dssp EEESS-C----SSHHHHHHHHHHHTCCTTCEEEE
T ss_pred EECCc-h----HhHHHHHHHHHHhhCCCCCEEEE
Confidence 99876 2 234567777664 554 344443
No 257
>1vlm_A SAM-dependent methyltransferase; possible histamine methyltransferase, structural genomics, JCSG, protein struc initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.66.1.41
Probab=99.02 E-value=3.9e-09 Score=80.96 Aligned_cols=82 Identities=15% Similarity=0.195 Sum_probs=67.2
Q ss_pred CCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCCCC
Q 028214 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTRK 127 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~~ 127 (212)
+.+|||+|||+|.++..++.. +++|+++.+++.++++ +++++++|+.+++... +||+|+++..+++..
T Consensus 48 ~~~vLDiG~G~G~~~~~l~~~-----~~vD~s~~~~~~a~~~------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~~ 116 (219)
T 1vlm_A 48 EGRGVEIGVGTGRFAVPLKIK-----IGVEPSERMAEIARKR------GVFVLKGTAENLPLKDESFDFALMVTTICFVD 116 (219)
T ss_dssp SSCEEEETCTTSTTHHHHTCC-----EEEESCHHHHHHHHHT------TCEEEECBTTBCCSCTTCEEEEEEESCGGGSS
T ss_pred CCcEEEeCCCCCHHHHHHHHH-----hccCCCHHHHHHHHhc------CCEEEEcccccCCCCCCCeeEEEEcchHhhcc
Confidence 789999999999999888764 9999999999999887 4789999998887654 899999998887763
Q ss_pred CCchHHHHHHHHhhcC
Q 028214 128 KGVDMDFLSMALKVAS 143 (212)
Q Consensus 128 ~~~~~~~l~~~~~~~~ 143 (212)
.....++++.+.++
T Consensus 117 --~~~~~l~~~~~~L~ 130 (219)
T 1vlm_A 117 --DPERALKEAYRILK 130 (219)
T ss_dssp --CHHHHHHHHHHHEE
T ss_pred --CHHHHHHHHHHHcC
Confidence 23456666666654
No 258
>2plw_A Ribosomal RNA methyltransferase, putative; malaria, SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Plasmodium falciparum}
Probab=99.01 E-value=7.4e-09 Score=78.11 Aligned_cols=70 Identities=19% Similarity=0.279 Sum_probs=55.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-C--CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc--------------
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-G--ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE-------------- 109 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~--~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-------------- 109 (212)
.++.+|||+|||+|.++..+++. + ..+|+|+|+++.+ .. .+++++++|+.+..
T Consensus 21 ~~~~~vLDlGcG~G~~~~~l~~~~~~~~~~v~gvD~s~~~--------~~--~~v~~~~~d~~~~~~~~~~~~~~i~~~~ 90 (201)
T 2plw_A 21 KKNKIILDIGCYPGSWCQVILERTKNYKNKIIGIDKKIMD--------PI--PNVYFIQGEIGKDNMNNIKNINYIDNMN 90 (201)
T ss_dssp CTTEEEEEESCTTCHHHHHHHHHTTTSCEEEEEEESSCCC--------CC--TTCEEEECCTTTTSSCCC----------
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHcCCCCceEEEEeCCccC--------CC--CCceEEEccccchhhhhhcccccccccc
Confidence 36679999999999999999975 3 3689999999831 01 16889999998875
Q ss_pred -----------CC-CcccEEEEcCCCCCC
Q 028214 110 -----------WR-GHVDTVVMNPPFGTR 126 (212)
Q Consensus 110 -----------~~-~~~D~i~~nppy~~~ 126 (212)
.. .+||+|++|+++++.
T Consensus 91 ~~~~~~~~~~~~~~~~fD~v~~~~~~~~~ 119 (201)
T 2plw_A 91 NNSVDYKLKEILQDKKIDIILSDAAVPCI 119 (201)
T ss_dssp -CHHHHHHHHHHTTCCEEEEEECCCCCCC
T ss_pred chhhHHHHHhhcCCCcccEEEeCCCcCCC
Confidence 23 389999999887653
No 259
>2oo3_A Protein involved in catabolism of external DNA; structural genomics, unknown function, PSI-2, protein structure initiative; 2.00A {Legionella pneumophila subsp} SCOP: c.66.1.59
Probab=99.00 E-value=3.1e-10 Score=89.92 Aligned_cols=104 Identities=7% Similarity=-0.016 Sum_probs=80.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc-----CCCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE-----WRGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~-----~~~~~D~i~~npp 122 (212)
.+..+||+.+|||.+++++.+. ..+++.+|.++..++..++|++.. .++++++.|..... +..+||+|++|||
T Consensus 91 n~~~~LDlfaGSGaLgiEaLS~-~d~~vfvE~~~~a~~~L~~Nl~~~-~~~~V~~~D~~~~L~~l~~~~~~fdLVfiDPP 168 (283)
T 2oo3_A 91 NLNSTLSYYPGSPYFAINQLRS-QDRLYLCELHPTEYNFLLKLPHFN-KKVYVNHTDGVSKLNALLPPPEKRGLIFIDPS 168 (283)
T ss_dssp SSSSSCCEEECHHHHHHHHSCT-TSEEEEECCSHHHHHHHTTSCCTT-SCEEEECSCHHHHHHHHCSCTTSCEEEEECCC
T ss_pred cCCCceeEeCCcHHHHHHHcCC-CCeEEEEeCCHHHHHHHHHHhCcC-CcEEEEeCcHHHHHHHhcCCCCCccEEEECCC
Confidence 5667899999999999999994 579999999999999999999763 27999999976532 2237999999999
Q ss_pred CCCC-CCCchHHHHHHHHhhcCceEEEEecCc
Q 028214 123 FGTR-KKGVDMDFLSMALKVASQAVYSLHKTS 153 (212)
Q Consensus 123 y~~~-~~~~~~~~l~~~~~~~~~~~~~~~~~~ 153 (212)
|... ........+.+.......++|+++.|-
T Consensus 169 Ye~k~~~~~vl~~L~~~~~r~~~Gi~v~WYPi 200 (283)
T 2oo3_A 169 YERKEEYKEIPYAIKNAYSKFSTGLYCVWYPV 200 (283)
T ss_dssp CCSTTHHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred CCCCcHHHHHHHHHHHhCccCCCeEEEEEEec
Confidence 9853 223334455666666667888887764
No 260
>4e2x_A TCAB9; kijanose, tetronitrose, tetradeoxy sugar, sugar methylation, transferase; HET: SAH TYD; 1.40A {Micromonospora chalcea} PDB: 3ndi_A* 3ndj_A* 4e32_A* 4e33_A* 4e2y_A* 4e31_A* 4e2w_A* 4e2z_A* 4e30_A*
Probab=98.99 E-value=8.2e-10 Score=92.87 Aligned_cols=105 Identities=10% Similarity=0.091 Sum_probs=75.2
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCce---EEEEcccccCc
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDI---DFVQCDIRNLE 109 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v---~~~~~d~~~~~ 109 (212)
...+...+...+...++.+|||+|||+|.++..+++.+. +|+|+|+++.+++.|+++ +... .+...+...++
T Consensus 92 ~~~~~~~l~~~~~~~~~~~VLDiGcG~G~~~~~l~~~g~-~v~gvD~s~~~~~~a~~~----~~~~~~~~~~~~~~~~l~ 166 (416)
T 4e2x_A 92 FAMLARDFLATELTGPDPFIVEIGCNDGIMLRTIQEAGV-RHLGFEPSSGVAAKAREK----GIRVRTDFFEKATADDVR 166 (416)
T ss_dssp HHHHHHHHHHTTTCSSSCEEEEETCTTTTTHHHHHHTTC-EEEEECCCHHHHHHHHTT----TCCEECSCCSHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCCEEEEecCCCCHHHHHHHHcCC-cEEEECCCHHHHHHHHHc----CCCcceeeechhhHhhcc
Confidence 334444555554545788999999999999999998766 999999999999999877 2211 12334444444
Q ss_pred CC-CcccEEEEcCCCCCCCCCchHHHHHHHHhhcCc
Q 028214 110 WR-GHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQ 144 (212)
Q Consensus 110 ~~-~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~ 144 (212)
.. .+||+|+++-.+++.. ....+++++.+.++.
T Consensus 167 ~~~~~fD~I~~~~vl~h~~--d~~~~l~~~~r~Lkp 200 (416)
T 4e2x_A 167 RTEGPANVIYAANTLCHIP--YVQSVLEGVDALLAP 200 (416)
T ss_dssp HHHCCEEEEEEESCGGGCT--THHHHHHHHHHHEEE
T ss_pred cCCCCEEEEEECChHHhcC--CHHHHHHHHHHHcCC
Confidence 33 3899999999998874 345677777777653
No 261
>2wa2_A Non-structural protein 5; transferase, S-adenosyl-L- methionine, virion, membrane, flavivirus, N7-methyltransferase, 2'-O-methyltransferase; HET: SAM; 1.80A {Modoc virus} PDB: 2wa1_A*
Probab=98.97 E-value=9.2e-10 Score=87.80 Aligned_cols=72 Identities=19% Similarity=0.233 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHh---hcCCceEEE--EcccccCcCCCcccEEEEcC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA---DLELDIDFV--QCDIRNLEWRGHVDTVVMNP 121 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~---~~~~~v~~~--~~d~~~~~~~~~~D~i~~np 121 (212)
.++.+|||+|||+|.++..+++. .+|+|+|+++ +...++++.. ..+.+++++ ++|+.+++ ..+||+|++|.
T Consensus 81 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gVD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~Vvsd~ 156 (276)
T 2wa2_A 81 ELKGTVVDLGCGRGSWSYYAASQ--PNVREVKAYT-LGTSGHEKPRLVETFGWNLITFKSKVDVTKME-PFQADTVLCDI 156 (276)
T ss_dssp CCCEEEEEESCTTCHHHHHHHTS--TTEEEEEEEC-CCCTTSCCCCCCCCTTGGGEEEECSCCGGGCC-CCCCSEEEECC
T ss_pred CCCCEEEEeccCCCHHHHHHHHc--CCEEEEECch-hhhhhhhchhhhhhcCCCeEEEeccCcHhhCC-CCCcCEEEECC
Confidence 46789999999999999999987 5899999998 4333322211 111268899 99999876 34899999998
Q ss_pred C
Q 028214 122 P 122 (212)
Q Consensus 122 p 122 (212)
+
T Consensus 157 ~ 157 (276)
T 2wa2_A 157 G 157 (276)
T ss_dssp C
T ss_pred C
Confidence 7
No 262
>2oxt_A Nucleoside-2'-O-methyltransferase; flavivirus, viral enzyme, RNA capping, S-adenosyl-L-methionine, viral protein; HET: SAM; 2.90A {Meaban virus}
Probab=98.95 E-value=1.1e-09 Score=86.90 Aligned_cols=72 Identities=19% Similarity=0.190 Sum_probs=54.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHH---hhcCCceEEE--EcccccCcCCCcccEEEEcC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENA---ADLELDIDFV--QCDIRNLEWRGHVDTVVMNP 121 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~---~~~~~~v~~~--~~d~~~~~~~~~~D~i~~np 121 (212)
.++.+|||+|||+|.++..+++. .+|+|+|+++ +...++++. ...+.++.++ ++|+.+++ ..+||+|++|.
T Consensus 73 ~~g~~VLDlGcGtG~~s~~la~~--~~V~gvD~s~-m~~~a~~~~~~~~~~~~~v~~~~~~~D~~~l~-~~~fD~V~sd~ 148 (265)
T 2oxt_A 73 ELTGRVVDLGCGRGGWSYYAASR--PHVMDVRAYT-LGVGGHEVPRITESYGWNIVKFKSRVDIHTLP-VERTDVIMCDV 148 (265)
T ss_dssp CCCEEEEEESCTTSHHHHHHHTS--TTEEEEEEEC-CCCSSCCCCCCCCBTTGGGEEEECSCCTTTSC-CCCCSEEEECC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHc--CcEEEEECch-hhhhhhhhhhhhhccCCCeEEEecccCHhHCC-CCCCcEEEEeC
Confidence 46789999999999999999987 5899999998 432222111 1112258889 99999876 34899999998
Q ss_pred C
Q 028214 122 P 122 (212)
Q Consensus 122 p 122 (212)
+
T Consensus 149 ~ 149 (265)
T 2oxt_A 149 G 149 (265)
T ss_dssp C
T ss_pred c
Confidence 7
No 263
>2aot_A HMT, histamine N-methyltransferase; classic methyltransferase fold, protein-drug complex; HET: CSO 2PM SAH; 1.90A {Homo sapiens} SCOP: c.66.1.19 PDB: 1jqd_A* 2aou_A* 2aov_A* 2aox_A* 1jqe_A* 2aow_A*
Probab=98.92 E-value=7.9e-09 Score=82.82 Aligned_cols=95 Identities=12% Similarity=0.045 Sum_probs=66.3
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHc-CCCeE--EEEeCChHHHHHHHHHHhhc-CC---ceEEEEcccccCc------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLL-GADQV--IAIDIDSDSLELASENAADL-EL---DIDFVQCDIRNLE------ 109 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~-~~~~v--~~~D~~~~~~~~a~~~~~~~-~~---~v~~~~~d~~~~~------ 109 (212)
.++.+|||+|||+|.++..+ +.. +...| +|+|+|+.|++.|++++... +. ++.+..+++.+++
T Consensus 51 ~~~~~VLDiG~GtG~~~~~~l~~l~~~~~~~~v~~~~vD~S~~ml~~a~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~ 130 (292)
T 2aot_A 51 KSEIKILSIGGGAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKTSNLENVKFAWHKETSSEYQSRMLEK 130 (292)
T ss_dssp CSEEEEEEETCTTSHHHHHHHHHHHHHSTTCEEEEEEECSCHHHHHHHHHHHHTCSSCTTEEEEEECSCHHHHHHHHHTT
T ss_pred CCCCeEEEEcCCCCHHHHHHHHHHHhhCCCceeeEEEEeCCHHHHHHHHHHHHhccCCCcceEEEEecchhhhhhhhccc
Confidence 35679999999999766433 222 23344 99999999999999988653 22 3455677776654
Q ss_pred C-CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 110 W-RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 110 ~-~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
. ..+||+|++.-.+++..+ ....++++.+.++
T Consensus 131 ~~~~~fD~V~~~~~l~~~~d--~~~~l~~~~r~Lk 163 (292)
T 2aot_A 131 KELQKWDFIHMIQMLYYVKD--IPATLKFFHSLLG 163 (292)
T ss_dssp TCCCCEEEEEEESCGGGCSC--HHHHHHHHHHTEE
T ss_pred cCCCceeEEEEeeeeeecCC--HHHHHHHHHHHcC
Confidence 1 348999999999888743 3356666666654
No 264
>3opn_A Putative hemolysin; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics, nysgxrc; 2.05A {Lactococcus lactis subsp}
Probab=98.90 E-value=2.2e-09 Score=83.50 Aligned_cols=46 Identities=22% Similarity=0.349 Sum_probs=40.7
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHh
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAA 92 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~ 92 (212)
.++++|||+|||+|.++..+++.+..+|+|+|+++.+++.++++..
T Consensus 36 ~~g~~VLDiGcGtG~~t~~la~~g~~~V~gvDis~~ml~~a~~~~~ 81 (232)
T 3opn_A 36 INGKTCLDIGSSTGGFTDVMLQNGAKLVYALDVGTNQLAWKIRSDE 81 (232)
T ss_dssp CTTCEEEEETCTTSHHHHHHHHTTCSEEEEECSSCCCCCHHHHTCT
T ss_pred CCCCEEEEEccCCCHHHHHHHhcCCCEEEEEcCCHHHHHHHHHhCc
Confidence 4677999999999999999998876799999999999999877654
No 265
>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}
Probab=98.85 E-value=3e-08 Score=74.41 Aligned_cols=69 Identities=16% Similarity=0.146 Sum_probs=53.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CC---------CeEEEEeCChHHHHHHHHHHhhcCCceEEE-EcccccCcC-----
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GA---------DQVIAIDIDSDSLELASENAADLELDIDFV-QCDIRNLEW----- 110 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~---------~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~-~~d~~~~~~----- 110 (212)
.++.+|||+|||+|.++..+++. +. .+|+|+|+++.+ .. .+++++ ++|+.+...
T Consensus 21 ~~~~~vLDlGcG~G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~----~~~~~~~~~d~~~~~~~~~~~ 90 (196)
T 2nyu_A 21 RPGLRVLDCGAAPGAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PL----EGATFLCPADVTDPRTSQRIL 90 (196)
T ss_dssp CTTCEEEEETCCSCHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CC----TTCEEECSCCTTSHHHHHHHH
T ss_pred CCCCEEEEeCCCCCHHHHHHHHHhccccccccCCCceEEEEechhcc------cC----CCCeEEEeccCCCHHHHHHHH
Confidence 46789999999999999999976 43 689999999831 00 157888 999876431
Q ss_pred ---C-CcccEEEEcCCCCC
Q 028214 111 ---R-GHVDTVVMNPPFGT 125 (212)
Q Consensus 111 ---~-~~~D~i~~nppy~~ 125 (212)
. .+||+|+++++++.
T Consensus 91 ~~~~~~~fD~V~~~~~~~~ 109 (196)
T 2nyu_A 91 EVLPGRRADVILSDMAPNA 109 (196)
T ss_dssp HHSGGGCEEEEEECCCCCC
T ss_pred HhcCCCCCcEEEeCCCCCC
Confidence 1 27999999987654
No 266
>3giw_A Protein of unknown function DUF574; rossmann-fold protein, structural genomics, joint center for structural genomics, JCSG; HET: MSE UNL; 1.45A {Streptomyces avermitilis} PDB: 3go4_A*
Probab=98.82 E-value=2.4e-08 Score=79.15 Aligned_cols=109 Identities=15% Similarity=0.126 Sum_probs=75.3
Q ss_pred HHHHHHHhhcC-CCCCCEEEEEcCCc--ChHHHHHH-H-cCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccC
Q 028214 35 RMLYTAENSFG-DVSNKVVADFGCGC--GTLGAAAT-L-LGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL 108 (212)
Q Consensus 35 ~~l~~~~~~~~-~~~~~~vlDlg~G~--G~~~~~~~-~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~ 108 (212)
..+..+...+. .....++||+|||+ +..+..++ + .+..+|+++|.|+.|++.|+.++...+. +++++++|+.++
T Consensus 64 ~fl~rav~~l~~~~g~~q~LDLGcG~pT~~~~~~la~~~~P~arVv~VD~sp~mLa~Ar~~l~~~~~~~~~~v~aD~~~~ 143 (277)
T 3giw_A 64 DWMNRAVAHLAKEAGIRQFLDIGTGIPTSPNLHEIAQSVAPESRVVYVDNDPIVLTLSQGLLASTPEGRTAYVEADMLDP 143 (277)
T ss_dssp HHHHHHHHHHHHTSCCCEEEEESCCSCCSSCHHHHHHHHCTTCEEEEEECCHHHHHTTHHHHCCCSSSEEEEEECCTTCH
T ss_pred HHHHHHHHHhccccCCCEEEEeCCCCCcccHHHHHHHHHCCCCEEEEEeCChHHHHHHHHHhccCCCCcEEEEEecccCh
Confidence 34444444432 12447899999997 33334433 2 2556999999999999999998876443 699999999886
Q ss_pred cC-------CCccc-----EEEEcCCCCCCCCCch-HHHHHHHHhhcC
Q 028214 109 EW-------RGHVD-----TVVMNPPFGTRKKGVD-MDFLSMALKVAS 143 (212)
Q Consensus 109 ~~-------~~~~D-----~i~~nppy~~~~~~~~-~~~l~~~~~~~~ 143 (212)
.. ...|| .|++|..+|+..+... ...+++..+.++
T Consensus 144 ~~~l~~~~~~~~~D~~~p~av~~~avLH~l~d~~~p~~~l~~l~~~L~ 191 (277)
T 3giw_A 144 ASILDAPELRDTLDLTRPVALTVIAIVHFVLDEDDAVGIVRRLLEPLP 191 (277)
T ss_dssp HHHHTCHHHHTTCCTTSCCEEEEESCGGGSCGGGCHHHHHHHHHTTSC
T ss_pred hhhhcccccccccCcCCcchHHhhhhHhcCCchhhHHHHHHHHHHhCC
Confidence 31 12355 6889999999866543 567777776665
No 267
>1wg8_A Predicted S-adenosylmethionine-dependent methyltransferase; S-adenosyl-methyltransferase, MRAW; HET: SAM; 2.00A {Thermus thermophilus} SCOP: a.60.13.1 c.66.1.23
Probab=98.82 E-value=1.2e-08 Score=80.78 Aligned_cols=76 Identities=18% Similarity=0.184 Sum_probs=64.9
Q ss_pred CCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC------CcccEEEE
Q 028214 46 DVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------GHVDTVVM 119 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~------~~~D~i~~ 119 (212)
..++..++|.+||.|..+..+++. ..+|+|+|.|+.+++.|++ +.. .+++++++|+.++... .++|.|++
T Consensus 20 ~~~gg~~VD~T~G~GGHS~~il~~-~g~VigiD~Dp~Ai~~A~~-L~~--~rv~lv~~~f~~l~~~L~~~g~~~vDgIL~ 95 (285)
T 1wg8_A 20 VRPGGVYVDATLGGAGHARGILER-GGRVIGLDQDPEAVARAKG-LHL--PGLTVVQGNFRHLKRHLAALGVERVDGILA 95 (285)
T ss_dssp CCTTCEEEETTCTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHH-TCC--TTEEEEESCGGGHHHHHHHTTCSCEEEEEE
T ss_pred CCCCCEEEEeCCCCcHHHHHHHHC-CCEEEEEeCCHHHHHHHHh-hcc--CCEEEEECCcchHHHHHHHcCCCCcCEEEe
Confidence 347889999999999999999987 5599999999999999998 654 2799999999887421 27999999
Q ss_pred cCCCCC
Q 028214 120 NPPFGT 125 (212)
Q Consensus 120 nppy~~ 125 (212)
|+.+..
T Consensus 96 DLGvSS 101 (285)
T 1wg8_A 96 DLGVSS 101 (285)
T ss_dssp ECSCCH
T ss_pred CCcccc
Confidence 998765
No 268
>3lst_A CALO1 methyltransferase; calicheamicin, enediyne, SAH, STRU genomics, PSI-2, protein structure initiative; HET: SAH; 2.40A {Micromonospora echinospora}
Probab=98.81 E-value=1.2e-08 Score=83.86 Aligned_cols=99 Identities=15% Similarity=0.099 Sum_probs=70.1
Q ss_pred HHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCCCcccE
Q 028214 40 AENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWRGHVDT 116 (212)
Q Consensus 40 ~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~~~~D~ 116 (212)
....+...++.+|||+|||+|..+..+++. +..+++++|+ +.++. +++....+. ++++..+|+.+. .+ +||+
T Consensus 176 ~~~~~~~~~~~~vLDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~--~~~~~~~~~~~~v~~~~~d~~~~-~p-~~D~ 250 (348)
T 3lst_A 176 LARAGDFPATGTVADVGGGRGGFLLTVLREHPGLQGVLLDR-AEVVA--RHRLDAPDVAGRWKVVEGDFLRE-VP-HADV 250 (348)
T ss_dssp HHHHSCCCSSEEEEEETCTTSHHHHHHHHHCTTEEEEEEEC-HHHHT--TCCCCCGGGTTSEEEEECCTTTC-CC-CCSE
T ss_pred HHHhCCccCCceEEEECCccCHHHHHHHHHCCCCEEEEecC-HHHhh--cccccccCCCCCeEEEecCCCCC-CC-CCcE
Confidence 333434456789999999999999999875 3458999999 44554 333332222 699999999733 33 8999
Q ss_pred EEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 117 VVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 117 i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
|++...+|+..+......++++.+..+
T Consensus 251 v~~~~vlh~~~d~~~~~~L~~~~~~Lk 277 (348)
T 3lst_A 251 HVLKRILHNWGDEDSVRILTNCRRVMP 277 (348)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHTCC
T ss_pred EEEehhccCCCHHHHHHHHHHHHHhcC
Confidence 999998887654444567777776654
No 269
>2zfu_A Nucleomethylin, cerebral protein 1; nucleolar protein, SAM-binding protein, protein structure, N phosphoprotein, nuclear protein; HET: SAH; 2.00A {Homo sapiens}
Probab=98.76 E-value=1.5e-08 Score=77.23 Aligned_cols=76 Identities=30% Similarity=0.399 Sum_probs=59.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.++..++ .+++|+|+++. +++++++|+.+.+... +||+|+++..+|+
T Consensus 66 ~~~~~vLDiG~G~G~~~~~l~----~~v~~~D~s~~--------------~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~ 127 (215)
T 2zfu_A 66 PASLVVADFGCGDCRLASSIR----NPVHCFDLASL--------------DPRVTVCDMAQVPLEDESVDVAVFCLSLMG 127 (215)
T ss_dssp CTTSCEEEETCTTCHHHHHCC----SCEEEEESSCS--------------STTEEESCTTSCSCCTTCEEEEEEESCCCS
T ss_pred CCCCeEEEECCcCCHHHHHhh----ccEEEEeCCCC--------------CceEEEeccccCCCCCCCEeEEEEehhccc
Confidence 366899999999999988773 48999999987 3568899998876654 8999999999874
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
.....+++++.+.++
T Consensus 128 ---~~~~~~l~~~~~~L~ 142 (215)
T 2zfu_A 128 ---TNIRDFLEEANRVLK 142 (215)
T ss_dssp ---SCHHHHHHHHHHHEE
T ss_pred ---cCHHHHHHHHHHhCC
Confidence 334566776666654
No 270
>1fp1_D Isoliquiritigenin 2'-O-methyltransferase; protein-substrate, protein-product complex; HET: SAH HCC; 1.82A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpq_A*
Probab=98.76 E-value=3.8e-08 Score=81.57 Aligned_cols=89 Identities=19% Similarity=0.139 Sum_probs=69.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.++.+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.+ .||+|+++-.+|+
T Consensus 208 ~~~~~vLDvG~G~G~~~~~l~~~~~~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~-~~D~v~~~~~lh~ 279 (372)
T 1fp1_D 208 EGISTLVDVGGGSGRNLELIISKYPLIKGINFDL-PQVIENAPPL-----SGIEHVGGDMFA-SVP-QGDAMILKAVCHN 279 (372)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCC-CEEEEEEESSGGG
T ss_pred CCCCEEEEeCCCCcHHHHHHHHHCCCCeEEEeCh-HHHHHhhhhc-----CCCEEEeCCccc-CCC-CCCEEEEeccccc
Confidence 356899999999999999999764 458899999 8888877652 169999999987 444 3999999998887
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
..+......++++.+..+
T Consensus 280 ~~d~~~~~~l~~~~~~L~ 297 (372)
T 1fp1_D 280 WSDEKCIEFLSNCHKALS 297 (372)
T ss_dssp SCHHHHHHHHHHHHHHEE
T ss_pred CCHHHHHHHHHHHHHhcC
Confidence 654443467777776654
No 271
>4a6d_A Hydroxyindole O-methyltransferase; melatonin, circadian clock; HET: SAM; 2.40A {Homo sapiens} PDB: 4a6e_A*
Probab=98.74 E-value=1e-07 Score=78.47 Aligned_cols=95 Identities=18% Similarity=0.208 Sum_probs=73.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCCCcccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWRGHVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~~~~D~i~~nppy~ 124 (212)
....+|+|+|||+|.+++.+++. +..+++..|. |.+++.|++++...+. +++++.+|+.+.+.+ .+|++++.-.+|
T Consensus 178 ~~~~~v~DvGgG~G~~~~~l~~~~p~~~~~~~dl-p~v~~~a~~~~~~~~~~rv~~~~gD~~~~~~~-~~D~~~~~~vlh 255 (353)
T 4a6d_A 178 SVFPLMCDLGGGAGALAKECMSLYPGCKITVFDI-PEVVWTAKQHFSFQEEEQIDFQEGDFFKDPLP-EADLYILARVLH 255 (353)
T ss_dssp GGCSEEEEETCTTSHHHHHHHHHCSSCEEEEEEC-HHHHHHHHHHSCC--CCSEEEEESCTTTSCCC-CCSEEEEESSGG
T ss_pred ccCCeEEeeCCCCCHHHHHHHHhCCCceeEeccC-HHHHHHHHHhhhhcccCceeeecCccccCCCC-CceEEEeeeecc
Confidence 35679999999999999999966 4557888888 8899999998865544 899999999876544 689999988887
Q ss_pred CCCCCchHHHHHHHHhhcC
Q 028214 125 TRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 125 ~~~~~~~~~~l~~~~~~~~ 143 (212)
...+......++++.+..+
T Consensus 256 ~~~d~~~~~iL~~~~~al~ 274 (353)
T 4a6d_A 256 DWADGKCSHLLERIYHTCK 274 (353)
T ss_dssp GSCHHHHHHHHHHHHHHCC
T ss_pred cCCHHHHHHHHHHHHhhCC
Confidence 6555444566777776654
No 272
>3reo_A (ISO)eugenol O-methyltransferase; directed evolution, saturation mutagenesis, regioselectivity transferase; HET: SAH EUG; 1.90A {Clarkia breweri} PDB: 3tky_A* 1kyz_A* 1kyw_A*
Probab=98.73 E-value=5.7e-08 Score=80.46 Aligned_cols=89 Identities=11% Similarity=0.123 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.+..+|||+|||+|.++..+++. +..+++++|+ +.+++.++++ .+++++.+|+.+ +.+.. |+|++.-.+|+
T Consensus 202 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~p~~-D~v~~~~vlh~ 273 (368)
T 3reo_A 202 EGLTTIVDVGGGTGAVASMIVAKYPSINAINFDL-PHVIQDAPAF-----SGVEHLGGDMFD-GVPKG-DAIFIKWICHD 273 (368)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-SEEEEESCGGG
T ss_pred cCCCEEEEeCCCcCHHHHHHHHhCCCCEEEEEeh-HHHHHhhhhc-----CCCEEEecCCCC-CCCCC-CEEEEechhhc
Confidence 35689999999999999999865 4568999999 8888777643 269999999987 33334 99999988876
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
..+......++++.+..+
T Consensus 274 ~~~~~~~~~l~~~~~~L~ 291 (368)
T 3reo_A 274 WSDEHCLKLLKNCYAALP 291 (368)
T ss_dssp BCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 654444566777766654
No 273
>2p41_A Type II methyltransferase; vizier, viral enzymes involved in replication, dengue virus methyltransferase, structural genomics; HET: G1G SAH CIT; 1.80A {Dengue virus 2} SCOP: c.66.1.25 PDB: 2p1d_A* 1l9k_A* 2p3o_A* 2p3q_A* 2p40_A* 2p3l_A* 1r6a_A*
Probab=98.73 E-value=1.7e-08 Score=81.63 Aligned_cols=73 Identities=16% Similarity=0.134 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeC----ChHHHHHHHHHHhhcCC-ceEEEEc-ccccCcCCCcccEEEEc
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDI----DSDSLELASENAADLEL-DIDFVQC-DIRNLEWRGHVDTVVMN 120 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~----~~~~~~~a~~~~~~~~~-~v~~~~~-d~~~~~~~~~~D~i~~n 120 (212)
.++.+|||+|||+|.++..+++. .+|+|+|+ ++.+++.+ ..+..+. +++++++ |+.+++. .+||+|++|
T Consensus 81 ~~g~~VLDlGcG~G~~s~~la~~--~~V~gvD~~~~~~~~~~~~~--~~~~~~~~~v~~~~~~D~~~l~~-~~fD~V~sd 155 (305)
T 2p41_A 81 TPEGKVVDLGCGRGGWSYYCGGL--KNVREVKGLTKGGPGHEEPI--PMSTYGWNLVRLQSGVDVFFIPP-ERCDTLLCD 155 (305)
T ss_dssp CCCEEEEEETCTTSHHHHHHHTS--TTEEEEEEECCCSTTSCCCC--CCCSTTGGGEEEECSCCTTTSCC-CCCSEEEEC
T ss_pred CCCCEEEEEcCCCCHHHHHHHhc--CCEEEEeccccCchhHHHHH--HhhhcCCCCeEEEeccccccCCc-CCCCEEEEC
Confidence 35789999999999999999987 47999999 45333211 1111111 6899999 9988753 389999999
Q ss_pred CCCC
Q 028214 121 PPFG 124 (212)
Q Consensus 121 ppy~ 124 (212)
.+++
T Consensus 156 ~~~~ 159 (305)
T 2p41_A 156 IGES 159 (305)
T ss_dssp CCCC
T ss_pred Cccc
Confidence 8874
No 274
>1fp2_A Isoflavone O-methyltransferase; protein-product complex; HET: SAH HMO; 1.40A {Medicago sativa} SCOP: a.4.5.29 c.66.1.12 PDB: 1fpx_A* 2qyo_A*
Probab=98.72 E-value=2.1e-08 Score=82.45 Aligned_cols=86 Identities=16% Similarity=0.183 Sum_probs=65.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
+..+|||+|||+|.++..+++. +..+++++|+ +.+++.+++. . +++++.+|+.+ +.+ .||+|++.-.+|+.
T Consensus 188 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~----~-~v~~~~~d~~~-~~p-~~D~v~~~~~lh~~ 259 (352)
T 1fp2_A 188 GLESIVDVGGGTGTTAKIICETFPKLKCIVFDR-PQVVENLSGS----N-NLTYVGGDMFT-SIP-NADAVLLKYILHNW 259 (352)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCB----T-TEEEEECCTTT-CCC-CCSEEEEESCGGGS
T ss_pred cCceEEEeCCCccHHHHHHHHHCCCCeEEEeeC-HHHHhhcccC----C-CcEEEeccccC-CCC-CccEEEeehhhccC
Confidence 5679999999999999999966 4458999999 9998877652 1 59999999976 333 49999999998876
Q ss_pred CCCchHHHHHHHHhh
Q 028214 127 KKGVDMDFLSMALKV 141 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~ 141 (212)
.+......++++.+.
T Consensus 260 ~d~~~~~~l~~~~~~ 274 (352)
T 1fp2_A 260 TDKDCLRILKKCKEA 274 (352)
T ss_dssp CHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHh
Confidence 443333555555444
No 275
>2k4m_A TR8_protein, UPF0146 protein MTH_1000; alpha+beta, rossman fold, structural genomics, PSI-2; NMR {Methanothermobacterthermautotrophicus str}
Probab=98.72 E-value=4.6e-08 Score=69.69 Aligned_cols=76 Identities=16% Similarity=0.213 Sum_probs=57.7
Q ss_pred CCCEEEEEcCCcC-hHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC--CcccEE-EEcCC
Q 028214 48 SNKVVADFGCGCG-TLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR--GHVDTV-VMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G-~~~~~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~--~~~D~i-~~npp 122 (212)
.+.++||+|||+| ..+..+++ .+. .|+++|+++.+++ +++.|+.+.... ..||+| -+|||
T Consensus 35 ~~~rVlEVG~G~g~~vA~~La~~~g~-~V~atDInp~Av~--------------~v~dDiF~P~~~~Y~~~DLIYsirPP 99 (153)
T 2k4m_A 35 PGTRVVEVGAGRFLYVSDYIRKHSKV-DLVLTDIKPSHGG--------------IVRDDITSPRMEIYRGAALIYSIRPP 99 (153)
T ss_dssp SSSEEEEETCTTCCHHHHHHHHHSCC-EEEEECSSCSSTT--------------EECCCSSSCCHHHHTTEEEEEEESCC
T ss_pred CCCcEEEEccCCChHHHHHHHHhCCC-eEEEEECCccccc--------------eEEccCCCCcccccCCcCEEEEcCCC
Confidence 4579999999999 59999997 655 8999999998877 788999885543 289999 67998
Q ss_pred CCCCCCCchHHHHHHHHhhcC
Q 028214 123 FGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 123 y~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+.....++-+.+...
T Consensus 100 -----~El~~~i~~lA~~v~a 115 (153)
T 2k4m_A 100 -----AEIHSSLMRVADAVGA 115 (153)
T ss_dssp -----TTTHHHHHHHHHHHTC
T ss_pred -----HHHHHHHHHHHHHcCC
Confidence 4445445554444433
No 276
>3p9c_A Caffeic acid O-methyltransferase; S-adenosylmethionine dependent O-methyltransferase; HET: SAH; 1.80A {Lolium perenne} PDB: 3p9i_A* 3p9k_A*
Probab=98.69 E-value=1.1e-07 Score=78.72 Aligned_cols=89 Identities=17% Similarity=0.130 Sum_probs=68.2
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
.+..+|||+|||+|..+..+++. +..+++++|+ +.+++.++++ .++++..+|+.+ +.+.. |+|++.-.+|.
T Consensus 200 ~~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~D~~~-~~p~~-D~v~~~~vlh~ 271 (364)
T 3p9c_A 200 EGLGTLVDVGGGVGATVAAIAAHYPTIKGVNFDL-PHVISEAPQF-----PGVTHVGGDMFK-EVPSG-DTILMKWILHD 271 (364)
T ss_dssp TTCSEEEEETCTTSHHHHHHHHHCTTCEEEEEEC-HHHHTTCCCC-----TTEEEEECCTTT-CCCCC-SEEEEESCGGG
T ss_pred cCCCEEEEeCCCCCHHHHHHHHHCCCCeEEEecC-HHHHHhhhhc-----CCeEEEeCCcCC-CCCCC-CEEEehHHhcc
Confidence 45689999999999999999865 4568999999 8888776643 279999999987 44334 99999888876
Q ss_pred CCCCchHHHHHHHHhhcC
Q 028214 126 RKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 126 ~~~~~~~~~l~~~~~~~~ 143 (212)
..+......++++.+..+
T Consensus 272 ~~d~~~~~~L~~~~~~L~ 289 (364)
T 3p9c_A 272 WSDQHCATLLKNCYDALP 289 (364)
T ss_dssp SCHHHHHHHHHHHHHHSC
T ss_pred CCHHHHHHHHHHHHHHcC
Confidence 544444566777766654
No 277
>1i4w_A Mitochondrial replication protein MTF1; mitochondrial transcription factor, transcription initiation; 2.60A {Saccharomyces cerevisiae} SCOP: c.66.1.24
Probab=98.63 E-value=1.5e-07 Score=77.32 Aligned_cols=107 Identities=13% Similarity=0.028 Sum_probs=79.1
Q ss_pred CCccccccc-CCCChHHHHHHHHHHHhhc--CCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHh
Q 028214 17 SNPKVELEQ-YPTGPHIASRMLYTAENSF--GDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAA 92 (212)
Q Consensus 17 ~~~~~~~~~-~~~~~~~~~~~l~~~~~~~--~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~ 92 (212)
..+...+.| |-..+.+...++..+...- +..+++.|||+|.|.|.++..++.. .+.+|+++|+|+..+...++..
T Consensus 24 ~~~kk~lGQnFL~d~~i~~~Iv~~~~l~~~~~~~~~~~VlEIGPG~G~LT~~Ll~~~~~~~vvavE~D~~l~~~L~~~~- 102 (353)
T 1i4w_A 24 SKLKFFYGFKYLWNPTVYNKIFDKLDLTKTYKHPEELKVLDLYPGVGIQSAIFYNKYCPRQYSLLEKRSSLYKFLNAKF- 102 (353)
T ss_dssp CSSCCGGGCCCBCCHHHHHHHHHHHCGGGTCCCTTTCEEEEESCTTCHHHHHHHHHHCCSEEEEECCCHHHHHHHHHHT-
T ss_pred cCCCCCCCcCccCCHHHHHHHHHhccCCcccCcCCCCEEEEECCCCCHHHHHHHhhCCCCEEEEEecCHHHHHHHHHhc-
Confidence 445555555 7888899988887775321 1114689999999999999999975 3568999999999999998876
Q ss_pred hcCCceEEEEcccccCc-C----CC---------------cccEEEEcCCCCC
Q 028214 93 DLELDIDFVQCDIRNLE-W----RG---------------HVDTVVMNPPFGT 125 (212)
Q Consensus 93 ~~~~~v~~~~~d~~~~~-~----~~---------------~~D~i~~nppy~~ 125 (212)
.. .+++++++|+.++. . .. ..=.|++|.||..
T Consensus 103 ~~-~~l~ii~~D~l~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~vvaNLPYnI 154 (353)
T 1i4w_A 103 EG-SPLQILKRDPYDWSTYSNLIDEERIFVPEVQSSDHINDKFLTVANVTGEG 154 (353)
T ss_dssp TT-SSCEEECSCTTCHHHHHHHTTTTCSSCCCCCCTTSEEEEEEEEEECCSTT
T ss_pred cC-CCEEEEECCccchhhHHHhhcccccccccccccccCCCceEEEEECCCch
Confidence 22 27999999998764 1 10 0117999999965
No 278
>3sso_A Methyltransferase; macrolide, natural product, rossman fold; HET: SAH; 1.90A {Micromonospora griseorubida} PDB: 3ssn_A* 3ssm_A*
Probab=98.61 E-value=1.5e-07 Score=78.19 Aligned_cols=91 Identities=20% Similarity=0.195 Sum_probs=65.1
Q ss_pred CCCEEEEEcCC------cChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-------C
Q 028214 48 SNKVVADFGCG------CGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------G 112 (212)
Q Consensus 48 ~~~~vlDlg~G------~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-------~ 112 (212)
++.+|||+||| +|..++.+++. +..+|+|+|+++.+. . ...+++++++|+.+++.. .
T Consensus 216 ~~~rVLDIGCG~~~~~~TGG~Sl~la~~~fP~a~V~GVDiSp~m~------~--~~~rI~fv~GDa~dlpf~~~l~~~d~ 287 (419)
T 3sso_A 216 QQVRVLEIGVGGYKHPEWGGGSLRMWKSFFPRGQIYGLDIMDKSH------V--DELRIRTIQGDQNDAEFLDRIARRYG 287 (419)
T ss_dssp SCCEEEEECCSCTTCSSCCCHHHHHHHHHCTTCEEEEEESSCCGG------G--CBTTEEEEECCTTCHHHHHHHHHHHC
T ss_pred CCCEEEEEecCCCcCCCCCHHHHHHHHHhCCCCEEEEEECCHHHh------h--cCCCcEEEEecccccchhhhhhcccC
Confidence 57899999999 77777777754 456999999999862 1 122799999999987544 4
Q ss_pred cccEEEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEE
Q 028214 113 HVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSL 149 (212)
Q Consensus 113 ~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~ 149 (212)
+||+|++|-. +.. ......++++.+.++ +++|++
T Consensus 288 sFDlVisdgs-H~~--~d~~~aL~el~rvLKPGGvlVi 322 (419)
T 3sso_A 288 PFDIVIDDGS-HIN--AHVRTSFAALFPHVRPGGLYVI 322 (419)
T ss_dssp CEEEEEECSC-CCH--HHHHHHHHHHGGGEEEEEEEEE
T ss_pred CccEEEECCc-ccc--hhHHHHHHHHHHhcCCCeEEEE
Confidence 8999999853 221 223466777777776 344444
No 279
>2xyq_A Putative 2'-O-methyl transferase; transferase-viral protein complex, rossman fold; HET: SAH; 2.00A {Sars coronavirus} PDB: 2xyv_A* 2xyr_A*
Probab=98.60 E-value=4.6e-07 Score=72.52 Aligned_cols=67 Identities=19% Similarity=0.179 Sum_probs=49.3
Q ss_pred CCCCCCEEEEEcCCc------ChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEE-EEcccccCcCCCcccE
Q 028214 45 GDVSNKVVADFGCGC------GTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDF-VQCDIRNLEWRGHVDT 116 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~------G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~-~~~d~~~~~~~~~~D~ 116 (212)
...++.+|||+|||+ |. ...+...+ ..+|+|+|+++. + . ++++ +++|+.+.+...+||+
T Consensus 60 ~l~~g~~VLDLGcGsg~~~GpGs-~~~a~~~~~~~~V~gvDis~~--------v--~--~v~~~i~gD~~~~~~~~~fD~ 126 (290)
T 2xyq_A 60 AVPYNMRVIHFGAGSDKGVAPGT-AVLRQWLPTGTLLVDSDLNDF--------V--S--DADSTLIGDCATVHTANKWDL 126 (290)
T ss_dssp CCCTTCEEEEESCCCTTSBCHHH-HHHHHHSCTTCEEEEEESSCC--------B--C--SSSEEEESCGGGCCCSSCEEE
T ss_pred CCCCCCEEEEeCCCCCCCCCcHH-HHHHHHcCCCCEEEEEECCCC--------C--C--CCEEEEECccccCCccCcccE
Confidence 345678999999955 66 33333334 368999999987 1 1 5778 9999998776568999
Q ss_pred EEEcCCCC
Q 028214 117 VVMNPPFG 124 (212)
Q Consensus 117 i~~nppy~ 124 (212)
|++|++.+
T Consensus 127 Vvsn~~~~ 134 (290)
T 2xyq_A 127 IISDMYDP 134 (290)
T ss_dssp EEECCCCC
T ss_pred EEEcCCcc
Confidence 99997643
No 280
>3cvo_A Methyltransferase-like protein of unknown functio; rossman fold, structural genomics, joint center for structur genomics, JCSG; HET: MSE PG4; 1.80A {Silicibacter pomeroyi dss-3}
Probab=98.59 E-value=3.4e-06 Score=63.82 Aligned_cols=100 Identities=18% Similarity=0.211 Sum_probs=70.9
Q ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC----ceEEEEccc
Q 028214 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL----DIDFVQCDI 105 (212)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~----~v~~~~~d~ 105 (212)
.....++|..... +.++|||+|| |..++.+++....+|+.+|.|++..+.|+++++..+. +++++.+|+
T Consensus 17 ~~~~~~~L~~~l~-----~a~~VLEiGt--GySTl~lA~~~~g~VvtvE~d~~~~~~ar~~l~~~g~~~~~~I~~~~gda 89 (202)
T 3cvo_A 17 PPAEAEALRMAYE-----EAEVILEYGS--GGSTVVAAELPGKHVTSVESDRAWARMMKAWLAANPPAEGTEVNIVWTDI 89 (202)
T ss_dssp CHHHHHHHHHHHH-----HCSEEEEESC--SHHHHHHHTSTTCEEEEEESCHHHHHHHHHHHHHSCCCTTCEEEEEECCC
T ss_pred CHHHHHHHHHHhh-----CCCEEEEECc--hHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHHHHcCCCCCCceEEEEeCc
Confidence 3444555545332 5689999998 5677777775346999999999999999999998874 799999997
Q ss_pred ccC---------------c--------CC--CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC
Q 028214 106 RNL---------------E--------WR--GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 106 ~~~---------------~--------~~--~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
.+. + .. ..||+|+.|-.+. ...+..++...+
T Consensus 90 ~~~~~wg~p~~~~~~~~l~~~~~~i~~~~~~~~fDlIfIDg~k~-------~~~~~~~l~~l~ 145 (202)
T 3cvo_A 90 GPTGDWGHPVSDAKWRSYPDYPLAVWRTEGFRHPDVVLVDGRFR-------VGCALATAFSIT 145 (202)
T ss_dssp SSBCGGGCBSSSTTGGGTTHHHHGGGGCTTCCCCSEEEECSSSH-------HHHHHHHHHHCS
T ss_pred hhhhcccccccchhhhhHHHHhhhhhccccCCCCCEEEEeCCCc-------hhHHHHHHHhcC
Confidence 543 1 11 3799999986421 244445555544
No 281
>3o4f_A Spermidine synthase; aminopropyltransferase, polyamine synthase, rossmann fold, P biosynthesis, spermidine biosynthesis, transferase; 2.90A {Escherichia coli}
Probab=98.59 E-value=8.3e-07 Score=70.93 Aligned_cols=103 Identities=13% Similarity=0.138 Sum_probs=78.2
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhc------CCceEEEEcccccCcCCC--cccEEE
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADL------ELDIDFVQCDIRNLEWRG--HVDTVV 118 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~------~~~v~~~~~d~~~~~~~~--~~D~i~ 118 (212)
.+++||-+|.|.|....++.++. ..+|+.+|+|+..++.+++.+... ..+++++.+|...+.... +||+|+
T Consensus 83 ~pk~VLIiGgGdG~~~revlk~~~v~~v~~VEID~~Vv~~a~~~lp~~~~~~~~dpRv~v~~~Dg~~~l~~~~~~yDvIi 162 (294)
T 3o4f_A 83 HAKHVLIIGGGDGAMLREVTRHKNVESITMVEIDAGVVSFCRQYLPNHNAGSYDDPRFKLVIDDGVNFVNQTSQTFDVII 162 (294)
T ss_dssp CCCEEEEESCTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCTTTTTSCSSCCEEEEE
T ss_pred CCCeEEEECCCchHHHHHHHHcCCcceEEEEcCCHHHHHHHHhcCccccccccCCCcEEEEechHHHHHhhccccCCEEE
Confidence 57899999999999999999874 579999999999999999876431 127999999999987654 899999
Q ss_pred EcCCCCCC--CCCchHHHHHHHHhhcC-ceEEEEe
Q 028214 119 MNPPFGTR--KKGVDMDFLSMALKVAS-QAVYSLH 150 (212)
Q Consensus 119 ~nppy~~~--~~~~~~~~l~~~~~~~~-~~~~~~~ 150 (212)
.|.+=... ..-....+++.+.+.+. ++++...
T Consensus 163 ~D~~dp~~~~~~L~t~eFy~~~~~~L~p~Gv~v~q 197 (294)
T 3o4f_A 163 SDCTDPIGPGESLFTSAFYEGCKRCLNPGGIFVAQ 197 (294)
T ss_dssp ESCCCCCCTTCCSSCCHHHHHHHHTEEEEEEEEEE
T ss_pred EeCCCcCCCchhhcCHHHHHHHHHHhCCCCEEEEe
Confidence 98753221 11123467777777765 4555443
No 282
>1zg3_A Isoflavanone 4'-O-methyltransferase; rossman fold, plant Pro transferase; HET: 2HI SAH; 2.35A {Medicago truncatula} PDB: 1zga_A* 1zhf_A* 1zgj_A*
Probab=98.59 E-value=7.5e-08 Score=79.35 Aligned_cols=87 Identities=14% Similarity=0.157 Sum_probs=66.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
+..+|||+|||+|.++..+++.. ..+++++|+ +.+++.+++. .+++++.+|+.+ +.+ .||+|+++-.+|+.
T Consensus 193 ~~~~vlDvG~G~G~~~~~l~~~~p~~~~~~~D~-~~~~~~a~~~-----~~v~~~~~d~~~-~~~-~~D~v~~~~vlh~~ 264 (358)
T 1zg3_A 193 GLESLVDVGGGTGGVTKLIHEIFPHLKCTVFDQ-PQVVGNLTGN-----ENLNFVGGDMFK-SIP-SADAVLLKWVLHDW 264 (358)
T ss_dssp TCSEEEEETCTTSHHHHHHHHHCTTSEEEEEEC-HHHHSSCCCC-----SSEEEEECCTTT-CCC-CCSEEEEESCGGGS
T ss_pred CCCEEEEECCCcCHHHHHHHHHCCCCeEEEecc-HHHHhhcccC-----CCcEEEeCccCC-CCC-CceEEEEcccccCC
Confidence 55799999999999999999763 458999999 7888766542 159999999987 444 59999999998876
Q ss_pred CCCchHHHHHHHHhhc
Q 028214 127 KKGVDMDFLSMALKVA 142 (212)
Q Consensus 127 ~~~~~~~~l~~~~~~~ 142 (212)
.+......++++.+..
T Consensus 265 ~d~~~~~~l~~~~~~L 280 (358)
T 1zg3_A 265 NDEQSLKILKNSKEAI 280 (358)
T ss_dssp CHHHHHHHHHHHHHHT
T ss_pred CHHHHHHHHHHHHHhC
Confidence 4443345666555443
No 283
>4fzv_A Putative methyltransferase NSUN4; mterf fold, methyltransferase fold, rRNA methyltransferase, mitochondria, transferase; HET: MSE SAM; 2.00A {Homo sapiens} PDB: 4fp9_A*
Probab=98.51 E-value=1.6e-07 Score=77.31 Aligned_cols=81 Identities=17% Similarity=0.158 Sum_probs=67.8
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcC-CCeEEEEeCChHHHHHHHHHHhhcCC-------ceEEEEcccccCcC--CCcc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLG-ADQVIAIDIDSDSLELASENAADLEL-------DIDFVQCDIRNLEW--RGHV 114 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~-~~~v~~~D~~~~~~~~a~~~~~~~~~-------~v~~~~~d~~~~~~--~~~~ 114 (212)
...++.+|||++||.|.-+..++..+ ...++++|+++..++.+++|++..+. ++.+.+.|...+.. ...|
T Consensus 145 ~~~pg~~VLD~CAaPGGKT~~la~~~~~~~l~A~D~~~~R~~~l~~~l~r~~~~~~~~~~~v~v~~~D~~~~~~~~~~~f 224 (359)
T 4fzv_A 145 GLQPGDIVLDLCAAPGGKTLALLQTGCCRNLAANDLSPSRIARLQKILHSYVPEEIRDGNQVRVTSWDGRKWGELEGDTY 224 (359)
T ss_dssp CCCTTEEEEESSCTTCHHHHHHHHTTCEEEEEEECSCHHHHHHHHHHHHHHSCTTTTTSSSEEEECCCGGGHHHHSTTCE
T ss_pred CCCCCCEEEEecCCccHHHHHHHHhcCCCcEEEEcCCHHHHHHHHHHHHHhhhhhhccCCceEEEeCchhhcchhccccC
Confidence 45688999999999999988888764 34799999999999999999987643 68899999887653 3389
Q ss_pred cEEEEcCCCCC
Q 028214 115 DTVVMNPPFGT 125 (212)
Q Consensus 115 D~i~~nppy~~ 125 (212)
|.|++|+|+..
T Consensus 225 D~VLlDaPCSg 235 (359)
T 4fzv_A 225 DRVLVDVPCTT 235 (359)
T ss_dssp EEEEEECCCCC
T ss_pred CEEEECCccCC
Confidence 99999999864
No 284
>2c7p_A Modification methylase HHAI; DNA methyltransferase, methyltransferase, base flipping, restriction system, transferase; HET: 5CM A1P SAH EPE CIT; 1.7A {Haemophilus haemolyticus} SCOP: c.66.1.26 PDB: 10mh_A* 1m0e_A* 1mht_A* 1hmy_A* 1skm_A* 2c7o_A* 2c7q_A* 2hmy_B* 2hr1_A* 3eeo_A* 3mht_A* 4mht_A* 5mht_A* 6mht_A* 7mht_A* 8mht_A* 9mht_A* 2zcj_A* 2z6u_A* 2z6q_A* ...
Probab=98.47 E-value=4.6e-07 Score=73.86 Aligned_cols=73 Identities=19% Similarity=0.155 Sum_probs=62.4
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC--cccEEEEcCCCCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFGT 125 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~D~i~~nppy~~ 125 (212)
.+.+++|++||+|.+++.+.+.|...|+++|+++.+++..+.|.... . ++|+.++.... .+|+|+.+||+..
T Consensus 10 ~~~~~~dLFaG~Gg~~~g~~~aG~~~v~~~e~d~~a~~t~~~N~~~~---~---~~Di~~~~~~~~~~~D~l~~gpPCQ~ 83 (327)
T 2c7p_A 10 TGLRFIDLFAGLGGFRLALESCGAECVYSNEWDKYAQEVYEMNFGEK---P---EGDITQVNEKTIPDHDILCAGFPCQA 83 (327)
T ss_dssp TTCEEEEETCTTTHHHHHHHHTTCEEEEEECCCHHHHHHHHHHHSCC---C---BSCGGGSCGGGSCCCSEEEEECCCTT
T ss_pred CCCcEEEECCCcCHHHHHHHHCCCeEEEEEeCCHHHHHHHHHHcCCC---C---cCCHHHcCHhhCCCCCEEEECCCCCC
Confidence 45789999999999999999988888999999999999999998543 1 68888876443 6999999999977
Q ss_pred C
Q 028214 126 R 126 (212)
Q Consensus 126 ~ 126 (212)
.
T Consensus 84 f 84 (327)
T 2c7p_A 84 F 84 (327)
T ss_dssp T
T ss_pred c
Confidence 6
No 285
>3ua3_A Protein arginine N-methyltransferase 5; TIM-barrel, rossmann fold, beta-barrel, symmetric arginine dimethylase, SAM binding; HET: SAH; 3.00A {Caenorhabditis elegans} PDB: 3ua4_A
Probab=98.47 E-value=3.6e-07 Score=80.54 Aligned_cols=74 Identities=14% Similarity=0.187 Sum_probs=56.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHc----C----------CCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcC-
Q 028214 48 SNKVVADFGCGCGTLGAAATLL----G----------ADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEW- 110 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~----~----------~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~- 110 (212)
+++.|+|+|||+|.++..++.. + ..+|+|+|.|+.++..++.... ++. +|+++++|++++..
T Consensus 409 ~~~VVldVGaGtGpLs~~al~A~~~a~~~~~~~~~~~~~kVyAVEknp~A~~~l~~~~~-Ng~~d~VtVI~gd~eev~lp 487 (745)
T 3ua3_A 409 KTVVIYLLGGGRGPIGTKILKSEREYNNTFRQGQESLKVKLYIVEKNPNAIVTLKYMNV-RTWKRRVTIIESDMRSLPGI 487 (745)
T ss_dssp SEEEEEEESCTTCHHHHHHHHHHHHHHHHHSTTSCCCEEEEEEEECCHHHHHHHHHHHH-HTTTTCSEEEESCGGGHHHH
T ss_pred CCcEEEEECCCCCHHHHHHHHHHHHhCccccccccccccEEEEEeCChHHHHHHHHHHh-cCCCCeEEEEeCchhhcccc
Confidence 3568999999999996433221 1 2399999999988766655443 554 69999999999876
Q ss_pred -----CCcccEEEEcCC
Q 028214 111 -----RGHVDTVVMNPP 122 (212)
Q Consensus 111 -----~~~~D~i~~npp 122 (212)
..++|+||+-..
T Consensus 488 ~~~~~~ekVDIIVSElm 504 (745)
T 3ua3_A 488 AKDRGFEQPDIIVSELL 504 (745)
T ss_dssp HHHTTCCCCSEEEECCC
T ss_pred cccCCCCcccEEEEecc
Confidence 569999999766
No 286
>1g55_A DNA cytosine methyltransferase DNMT2; human DNA methyltransferase homologue; HET: DNA SAH; 1.80A {Homo sapiens} SCOP: c.66.1.26
Probab=98.45 E-value=1.6e-07 Score=77.04 Aligned_cols=73 Identities=22% Similarity=0.266 Sum_probs=59.2
Q ss_pred CEEEEEcCCcChHHHHHHHcC--CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC----cccEEEEcCCC
Q 028214 50 KVVADFGCGCGTLGAAATLLG--ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNPPF 123 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~--~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~D~i~~nppy 123 (212)
.+++|++||+|.+++.+.+.| ...|+++|+++.+++..+.|... ..++++|+.++.... .+|+++.+||+
T Consensus 3 ~~v~dLFaG~Gg~~~g~~~~G~~~~~v~~~E~d~~a~~~~~~N~~~----~~~~~~Di~~~~~~~~~~~~~D~l~~gpPC 78 (343)
T 1g55_A 3 LRVLELYSGVGGMHHALRESCIPAQVVAAIDVNTVANEVYKYNFPH----TQLLAKTIEGITLEEFDRLSFDMILMSPPC 78 (343)
T ss_dssp EEEEEETCTTCHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECSCGGGCCHHHHHHHCCSEEEECCC-
T ss_pred CeEEEeCcCccHHHHHHHHCCCCceEEEEEeCCHHHHHHHHHhccc----cccccCCHHHccHhHcCcCCcCEEEEcCCC
Confidence 589999999999999999887 45799999999999999999863 457889998875432 59999999997
Q ss_pred CCC
Q 028214 124 GTR 126 (212)
Q Consensus 124 ~~~ 126 (212)
...
T Consensus 79 q~f 81 (343)
T 1g55_A 79 QPF 81 (343)
T ss_dssp ---
T ss_pred cch
Confidence 554
No 287
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=98.44 E-value=1e-06 Score=70.85 Aligned_cols=60 Identities=25% Similarity=0.237 Sum_probs=48.7
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL 94 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~ 94 (212)
+..+...++.... .+++.|||+|||+|.+++++++.+. +++|+|+++.+++.|+++++..
T Consensus 221 p~~l~~~~i~~~~-----~~~~~vlD~f~GsGt~~~~a~~~g~-~~~g~e~~~~~~~~a~~r~~~~ 280 (297)
T 2zig_A 221 PLELAERLVRMFS-----FVGDVVLDPFAGTGTTLIAAARWGR-RALGVELVPRYAQLAKERFARE 280 (297)
T ss_dssp CHHHHHHHHHHHC-----CTTCEEEETTCTTTHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHHh
Confidence 3445555544332 3788999999999999999998865 8999999999999999998764
No 288
>3g7u_A Cytosine-specific methyltransferase; DNA-binding, NAD-binding, structural GENO protein structure initiative, PSI; 1.75A {Escherichia coli O157}
Probab=98.41 E-value=7.6e-07 Score=73.89 Aligned_cols=73 Identities=26% Similarity=0.279 Sum_probs=62.4
Q ss_pred CEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC---------CCcccEEEEc
Q 028214 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---------RGHVDTVVMN 120 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~---------~~~~D~i~~n 120 (212)
.+++|++||+|.+++.+.+.|...|.++|+++.+++..+.|.. +..++++|+.++.. ...+|+|+.+
T Consensus 3 ~~vidLFsG~GGlslG~~~aG~~~v~avE~d~~a~~t~~~N~~----~~~~~~~DI~~~~~~~~~~~~~~~~~~D~i~gg 78 (376)
T 3g7u_A 3 LNVIDLFSGVGGLSLGAARAGFDVKMAVEIDQHAINTHAINFP----RSLHVQEDVSLLNAEIIKGFFKNDMPIDGIIGG 78 (376)
T ss_dssp CEEEEETCTTSHHHHHHHHHTCEEEEEECSCHHHHHHHHHHCT----TSEEECCCGGGCCHHHHHHHHCSCCCCCEEEEC
T ss_pred CeEEEEccCcCHHHHHHHHCCCcEEEEEeCCHHHHHHHHHhCC----CCceEecChhhcCHHHHHhhcccCCCeeEEEec
Confidence 4799999999999999998888788899999999999998875 46788999988742 2379999999
Q ss_pred CCCCCC
Q 028214 121 PPFGTR 126 (212)
Q Consensus 121 ppy~~~ 126 (212)
||+...
T Consensus 79 pPCQ~f 84 (376)
T 3g7u_A 79 PPCQGF 84 (376)
T ss_dssp CCCCTT
T ss_pred CCCCCc
Confidence 998655
No 289
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=98.35 E-value=1.3e-06 Score=68.88 Aligned_cols=60 Identities=25% Similarity=0.344 Sum_probs=47.9
Q ss_pred hHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC
Q 028214 30 PHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE 95 (212)
Q Consensus 30 ~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~ 95 (212)
..+...++.... .+++.|||++||+|..++++.+.+. +++|+|+++.+++.++++++.++
T Consensus 199 ~~l~~~~i~~~~-----~~~~~vlD~f~GsGtt~~~a~~~gr-~~ig~e~~~~~~~~~~~r~~~~~ 258 (260)
T 1g60_A 199 RDLIERIIRASS-----NPNDLVLDCFMGSGTTAIVAKKLGR-NFIGCDMNAEYVNQANFVLNQLE 258 (260)
T ss_dssp HHHHHHHHHHHC-----CTTCEEEESSCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHC--
T ss_pred HHHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCC-eEEEEeCCHHHHHHHHHHHHhcc
Confidence 445555543322 3788999999999999999999865 89999999999999999998664
No 290
>2ld4_A Anamorsin; methyltransferase-like fold, alpha/beta fold, iron-sulfur PR biogenesis, apoptosis; NMR {Homo sapiens} PDB: 2yui_A
Probab=98.32 E-value=8.7e-07 Score=65.29 Aligned_cols=80 Identities=10% Similarity=0.062 Sum_probs=61.9
Q ss_pred CCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC---CC-cccEEEEc
Q 028214 45 GDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---RG-HVDTVVMN 120 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~---~~-~~D~i~~n 120 (212)
+..++.+|||+|||. +++|+++.|++.|+++... ++++.++|+.+++. .+ +||+|+++
T Consensus 9 g~~~g~~vL~~~~g~---------------v~vD~s~~ml~~a~~~~~~---~~~~~~~d~~~~~~~~~~~~~fD~V~~~ 70 (176)
T 2ld4_A 9 GISAGQFVAVVWDKS---------------SPVEALKGLVDKLQALTGN---EGRVSVENIKQLLQSAHKESSFDIILSG 70 (176)
T ss_dssp TCCTTSEEEEEECTT---------------SCHHHHHHHHHHHHHHTTT---TSEEEEEEGGGGGGGCCCSSCEEEEEEC
T ss_pred CCCCCCEEEEecCCc---------------eeeeCCHHHHHHHHHhccc---CcEEEEechhcCccccCCCCCEeEEEEC
Confidence 345789999999986 2399999999999988754 48999999998876 34 89999998
Q ss_pred CCCCCCCCCchHHHHHHHHhhcC
Q 028214 121 PPFGTRKKGVDMDFLSMALKVAS 143 (212)
Q Consensus 121 ppy~~~~~~~~~~~l~~~~~~~~ 143 (212)
-.+++... .....++++.+.++
T Consensus 71 ~~l~~~~~-~~~~~l~~~~r~Lk 92 (176)
T 2ld4_A 71 LVPGSTTL-HSAEILAEIARILR 92 (176)
T ss_dssp CSTTCCCC-CCHHHHHHHHHHEE
T ss_pred Chhhhccc-CHHHHHHHHHHHCC
Confidence 88887611 23567777777665
No 291
>4auk_A Ribosomal RNA large subunit methyltransferase M; YGDE; HET: TLA PGE; 1.90A {Escherichia coli} PDB: 4atn_A* 4b17_A*
Probab=98.24 E-value=5.5e-06 Score=68.09 Aligned_cols=71 Identities=11% Similarity=0.050 Sum_probs=55.9
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFG 124 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~ 124 (212)
.++++++|+||++|..+-.+++++. +|+|+|..+-. . .+...+ +++++++|.....+.. .+|+|+||....
T Consensus 210 ~~G~~vlDLGAaPGGWT~~l~~rg~-~V~aVD~~~l~-~----~l~~~~-~V~~~~~d~~~~~~~~~~~D~vvsDm~~~ 281 (375)
T 4auk_A 210 ANGMWAVDLGACPGGWTYQLVKRNM-WVYSVDNGPMA-Q----SLMDTG-QVTWLREDGFKFRPTRSNISWMVCDMVEK 281 (375)
T ss_dssp CTTCEEEEETCTTCHHHHHHHHTTC-EEEEECSSCCC-H----HHHTTT-CEEEECSCTTTCCCCSSCEEEEEECCSSC
T ss_pred CCCCEEEEeCcCCCHHHHHHHHCCC-EEEEEEhhhcC-h----hhccCC-CeEEEeCccccccCCCCCcCEEEEcCCCC
Confidence 4789999999999999999998865 89999976411 1 111112 7999999999887765 899999998754
No 292
>3ubt_Y Modification methylase HAEIII; protein-DNA complex, DNA cytosine-5 methyltransferase, DNA B S-adenosyl methionine binding; HET: ATP 2PE; 2.50A {Haemophilus aegyptius} PDB: 1dct_A*
Probab=98.20 E-value=2.8e-06 Score=69.08 Aligned_cols=72 Identities=17% Similarity=0.218 Sum_probs=62.5
Q ss_pred CEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC--cccEEEEcCCCCCC
Q 028214 50 KVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFGTR 126 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~D~i~~nppy~~~ 126 (212)
.+++|++||.|.++.-+.+.|...+.++|+|+.+++.-+.|.. ..++.+|+.++.... ..|+++..||+...
T Consensus 1 mkvidLFsG~GG~~~G~~~aG~~~v~a~e~d~~a~~ty~~N~~-----~~~~~~DI~~i~~~~~~~~D~l~ggpPCQ~f 74 (331)
T 3ubt_Y 1 MNLISLFSGAGGLDLGFQKAGFRIICANEYDKSIWKTYESNHS-----AKLIKGDISKISSDEFPKCDGIIGGPPSQSW 74 (331)
T ss_dssp CEEEEESCTTCHHHHHHHHTTCEEEEEEECCTTTHHHHHHHCC-----SEEEESCGGGCCGGGSCCCSEEECCCCGGGT
T ss_pred CeEEEeCcCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHHCC-----CCcccCChhhCCHhhCCcccEEEecCCCCCc
Confidence 3799999999999999988888788999999999999988863 467899999886554 79999999999775
No 293
>3tka_A Ribosomal RNA small subunit methyltransferase H; HET: SAM CTN PG4; 2.25A {Escherichia coli}
Probab=98.19 E-value=5.7e-06 Score=67.02 Aligned_cols=88 Identities=17% Similarity=0.245 Sum_probs=68.7
Q ss_pred HHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-C-CCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC--
Q 028214 36 MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-G-ADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-- 111 (212)
Q Consensus 36 ~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~-~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-- 111 (212)
++......+...++..++|..||.|..+..+++. + ..+|+|+|.|+.+++.|+ ++. ..+++++++++.++...
T Consensus 45 Ll~Evl~~L~i~pggiyVD~TlG~GGHS~~iL~~lg~~GrVig~D~Dp~Al~~A~-rL~--~~Rv~lv~~nF~~l~~~L~ 121 (347)
T 3tka_A 45 LLDEAVNGLNIRPDGIYIDGTFGRGGHSRLILSQLGEEGRLLAIDRDPQAIAVAK-TID--DPRFSIIHGPFSALGEYVA 121 (347)
T ss_dssp TTHHHHHHTCCCTTCEEEESCCTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHT-TCC--CTTEEEEESCGGGHHHHHH
T ss_pred cHHHHHHhhCCCCCCEEEEeCcCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-hhc--CCcEEEEeCCHHHHHHHHH
Confidence 4455555555568899999999999999999975 3 469999999999999994 442 23799999999886321
Q ss_pred -----CcccEEEEcCCCCCC
Q 028214 112 -----GHVDTVVMNPPFGTR 126 (212)
Q Consensus 112 -----~~~D~i~~nppy~~~ 126 (212)
.++|.|++|..+...
T Consensus 122 ~~g~~~~vDgILfDLGVSS~ 141 (347)
T 3tka_A 122 ERDLIGKIDGILLDLGVSSP 141 (347)
T ss_dssp HTTCTTCEEEEEEECSCCHH
T ss_pred hcCCCCcccEEEECCccCHH
Confidence 159999999988754
No 294
>3c6k_A Spermine synthase; spermidine aminopropyltransferase, SPMSY, structural genomics, structural genomics consortium, SGC, phosphoprotein; HET: SPD MTA; 1.95A {Homo sapiens} PDB: 3c6m_A*
Probab=98.19 E-value=4.8e-06 Score=68.65 Aligned_cols=76 Identities=16% Similarity=0.090 Sum_probs=62.6
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc-----C----CceEEEEcccccCcC-----CC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADL-----E----LDIDFVQCDIRNLEW-----RG 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~-----~----~~v~~~~~d~~~~~~-----~~ 112 (212)
.++++||-+|.|.|....++.+++..+|+.+|+|+..++.|++.+... . .+++++.+|...+.. ..
T Consensus 204 ~~pkrVLIIGgGdG~~~revlkh~~~~V~~VEIDp~VVe~ar~yfp~~~~~~~d~pr~~rv~vii~Da~~fl~~~~~~~~ 283 (381)
T 3c6k_A 204 YTGKDVLILGGGDGGILCEIVKLKPKMVTMVEIDQMVIDGCKKYMRKTCGDVLDNLKGDCYQVLIEDCIPVLKRYAKEGR 283 (381)
T ss_dssp CTTCEEEEEECTTCHHHHHHHTTCCSEEEEEESCHHHHHHHHHHCCC----CCSSSEETTEEEEESCHHHHHHHHHHHTC
T ss_pred CCCCeEEEECCCcHHHHHHHHhcCCceeEEEccCHHHHHHHHhhchhhhhhhhccccccceeeehHHHHHHHHhhhhccC
Confidence 356899999999999999999887789999999999999999876421 1 158999999987753 23
Q ss_pred cccEEEEcCC
Q 028214 113 HVDTVVMNPP 122 (212)
Q Consensus 113 ~~D~i~~npp 122 (212)
+||+|+.|.+
T Consensus 284 ~yDvIIvDl~ 293 (381)
T 3c6k_A 284 EFDYVINDLT 293 (381)
T ss_dssp CEEEEEEECC
T ss_pred ceeEEEECCC
Confidence 7999999854
No 295
>2qrv_A DNA (cytosine-5)-methyltransferase 3A; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=98.10 E-value=9.3e-06 Score=65.11 Aligned_cols=76 Identities=18% Similarity=0.100 Sum_probs=62.5
Q ss_pred CCCCEEEEEcCCcChHHHHHHHcCCCe--EEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-----cccEEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATLLGADQ--VIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-----HVDTVVM 119 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~~~~~--v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~D~i~~ 119 (212)
....+++|++||.|.++..+.+.|... |+++|+|+.+++..+.|.. ...++.+|+.++.... .+|+++.
T Consensus 14 ~~~~~vidLFaG~GG~~~g~~~aG~~~~~v~a~E~d~~a~~ty~~N~~----~~~~~~~DI~~i~~~~i~~~~~~Dll~g 89 (295)
T 2qrv_A 14 RKPIRVLSLFDGIATGLLVLKDLGIQVDRYIASEVCEDSITVGMVRHQ----GKIMYVGDVRSVTQKHIQEWGPFDLVIG 89 (295)
T ss_dssp CCCEEEEEETCTTTHHHHHHHHTTBCEEEEEEECCCHHHHHHHHHHTT----TCEEEECCGGGCCHHHHHHTCCCSEEEE
T ss_pred CCCCEEEEeCcCccHHHHHHHHCCCccceEEEEECCHHHHHHHHHhCC----CCceeCCChHHccHHHhcccCCcCEEEe
Confidence 345689999999999999999888655 7999999999998888864 3467889998876432 5999999
Q ss_pred cCCCCCC
Q 028214 120 NPPFGTR 126 (212)
Q Consensus 120 nppy~~~ 126 (212)
.||+...
T Consensus 90 gpPCQ~f 96 (295)
T 2qrv_A 90 GSPCNDL 96 (295)
T ss_dssp CCCCGGG
T ss_pred cCCCccc
Confidence 9999765
No 296
>3evf_A RNA-directed RNA polymerase NS5; NS5 methyltransferase, RNA CAP binding, binding, capsid protein; HET: GTA SAH; 1.45A {Yellow fever virus} SCOP: c.66.1.0 PDB: 3evb_A* 3evc_A* 3evd_A* 3eve_A* 3eva_A*
Probab=98.07 E-value=1.3e-05 Score=63.12 Aligned_cols=91 Identities=16% Similarity=0.056 Sum_probs=54.8
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR 111 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (212)
++..|..+.......++.+|||+|||.|..+-.++.. +...+.|+|+..++....... ...+.++...+.++......
T Consensus 59 aA~KL~ei~ek~~l~~~~~VLDLGaAPGGWSQvAa~~~~~~~v~g~dVGvDl~~~pi~~-~~~g~~ii~~~~~~dv~~l~ 137 (277)
T 3evf_A 59 GTAKLRWFHERGYVKLEGRVIDLGCGRGGWCYYAAAQKEVSGVKGFTLGRDGHEKPMNV-QSLGWNIITFKDKTDIHRLE 137 (277)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTCCCCCCC-CBTTGGGEEEECSCCTTTSC
T ss_pred HHHHHHHHHHhCCCCCCCEEEEecCCCCHHHHHHHHhcCCCcceeEEEeccCccccccc-CcCCCCeEEEeccceehhcC
Confidence 3334444444434456779999999999999988865 566788888874431001110 11122444455654333332
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
..||+|++|...+
T Consensus 138 ~~~~DlVlsD~apn 151 (277)
T 3evf_A 138 PVKCDTLLCDIGES 151 (277)
T ss_dssp CCCCSEEEECCCCC
T ss_pred CCCccEEEecCccC
Confidence 3899999998665
No 297
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=98.06 E-value=1.6e-06 Score=70.53 Aligned_cols=77 Identities=10% Similarity=0.078 Sum_probs=58.9
Q ss_pred ChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC
Q 028214 29 GPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL 108 (212)
Q Consensus 29 ~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~ 108 (212)
+..+...++.... .+++.|||++||+|..++++.+.+. +.+|+|+++..++.++++++..+.....++.|+.++
T Consensus 238 p~~l~~~~i~~~~-----~~~~~VlDpF~GsGtt~~aa~~~gr-~~ig~e~~~~~~~~~~~r~~~~~~~~~~~~~~~~~i 311 (323)
T 1boo_A 238 PAKLPEFFIRMLT-----EPDDLVVDIFGGSNTTGLVAERESR-KWISFEMKPEYVAASAFRFLDNNISEEKITDIYNRI 311 (323)
T ss_dssp CTHHHHHHHHHHC-----CTTCEEEETTCTTCHHHHHHHHTTC-EEEEEESCHHHHHHHHGGGSCSCSCHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhC-----CCCCEEEECCCCCCHHHHHHHHcCC-CEEEEeCCHHHHHHHHHHHHhcccchHHHHHHHHHH
Confidence 3556655553322 3788999999999999999998865 899999999999999999987665555566666555
Q ss_pred cCC
Q 028214 109 EWR 111 (212)
Q Consensus 109 ~~~ 111 (212)
...
T Consensus 312 ~~~ 314 (323)
T 1boo_A 312 LNG 314 (323)
T ss_dssp HTT
T ss_pred HcC
Confidence 443
No 298
>4h0n_A DNMT2; SAH binding, transferase; HET: SAH; 2.71A {Spodoptera frugiperda}
Probab=98.01 E-value=8.4e-06 Score=66.51 Aligned_cols=73 Identities=23% Similarity=0.352 Sum_probs=60.8
Q ss_pred CEEEEEcCCcChHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC----cccEEEEcCCC
Q 028214 50 KVVADFGCGCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNPPF 123 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~D~i~~nppy 123 (212)
-+++|++||.|.++..+.+.|. ..|.++|+|+.+++..+.|... ..++++|+.++.... .+|+++..||+
T Consensus 4 ~~~idLFaG~GG~~~G~~~aG~~~~~v~a~e~d~~a~~ty~~N~~~----~~~~~~DI~~~~~~~~~~~~~D~l~ggpPC 79 (333)
T 4h0n_A 4 HKILELYSGIGGMHCAWKESGLDGEIVAAVDINTVANSVYKHNFPE----TNLLNRNIQQLTPQVIKKWNVDTILMSPPC 79 (333)
T ss_dssp EEEEEETCTTTHHHHHHHHHTCSEEEEEEECCCHHHHHHHHHHCTT----SCEECCCGGGCCHHHHHHTTCCEEEECCCC
T ss_pred CEEEEECcCccHHHHHHHHcCCCceEEEEEeCCHHHHHHHHHhCCC----CceeccccccCCHHHhccCCCCEEEecCCC
Confidence 3799999999999999888774 5789999999999999998753 456788988876432 59999999999
Q ss_pred CCC
Q 028214 124 GTR 126 (212)
Q Consensus 124 ~~~ 126 (212)
...
T Consensus 80 Q~f 82 (333)
T 4h0n_A 80 QPF 82 (333)
T ss_dssp CCS
T ss_pred cch
Confidence 765
No 299
>3qv2_A 5-cytosine DNA methyltransferase; DNMT2, ehmeth; HET: SAH; 2.15A {Entamoeba histolytica}
Probab=97.97 E-value=1.2e-05 Score=65.41 Aligned_cols=73 Identities=19% Similarity=0.254 Sum_probs=59.8
Q ss_pred CCEEEEEcCCcChHHHHHHHcCC--CeE-EEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC----cccEEEEcC
Q 028214 49 NKVVADFGCGCGTLGAAATLLGA--DQV-IAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG----HVDTVVMNP 121 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~~~--~~v-~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~----~~D~i~~np 121 (212)
.-+++|++||.|.++..+.+.|. ..| .++|+|+.+++..+.|.... ++++|+.++.... .+|+++..|
T Consensus 10 ~~~vidLFaG~GG~~~G~~~aG~~~~~v~~a~e~d~~a~~ty~~N~~~~-----~~~~DI~~~~~~~i~~~~~Dil~ggp 84 (327)
T 3qv2_A 10 QVNVIEFFSGIGGLRSSYERSSININATFIPFDINEIANKIYSKNFKEE-----VQVKNLDSISIKQIESLNCNTWFMSP 84 (327)
T ss_dssp CEEEEEETCTTTHHHHHHHHSSCCCCEEEEEECCCHHHHHHHHHHHCCC-----CBCCCTTTCCHHHHHHTCCCEEEECC
T ss_pred CCEEEEECCChhHHHHHHHHcCCCceEEEEEEECCHHHHHHHHHHCCCC-----cccCChhhcCHHHhccCCCCEEEecC
Confidence 45899999999999999988873 567 79999999999999997532 6778888775432 589999999
Q ss_pred CCCCC
Q 028214 122 PFGTR 126 (212)
Q Consensus 122 py~~~ 126 (212)
|+...
T Consensus 85 PCQ~f 89 (327)
T 3qv2_A 85 PCQPY 89 (327)
T ss_dssp CCTTC
T ss_pred CccCc
Confidence 97554
No 300
>2qy6_A UPF0209 protein YFCK; structural genomics, unknown function, PSI-2, protein struct initiative; 2.00A {Escherichia coli}
Probab=97.95 E-value=4.3e-05 Score=60.05 Aligned_cols=105 Identities=19% Similarity=0.186 Sum_probs=66.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-------CC------CeEEEEeCCh---HHH-----------HHHHHHHhh-------
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-------GA------DQVIAIDIDS---DSL-----------ELASENAAD------- 93 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-------~~------~~v~~~D~~~---~~~-----------~~a~~~~~~------- 93 (212)
+..+|||+|+|+|..++.+++. .. .+++++|.+| +.+ +.+++++..
T Consensus 60 ~~~~ILEiGfGtG~n~l~~~~~~~~~~~~~p~~~~~~l~~isiE~~p~~~~~l~~a~~~~p~l~~~a~~l~~~w~~~~~g 139 (257)
T 2qy6_A 60 PLFVVAESGFGTGLNFLTLWQAFDQFREAHPQAQLQRLHFISFEKFPLTRADLALAHQHWPELAPWAEQLQAQWPMPLPG 139 (257)
T ss_dssp SEEEEEESCCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCSCSE
T ss_pred CCCEEEEECCChHHHHHHHHHHHHhhhhhCCCCCcceeEEEEEECCcCCHHHHHHHHhcChhHHHHHHHHHHhccccccc
Confidence 4569999999999877665532 22 3899999886 333 355665543
Q ss_pred -----c--C-CceEEEEcccccCcCC--C----cccEEEEcCCCCCCCC-C-chHHHHHHHHhhcC-ceEEEEecCc
Q 028214 94 -----L--E-LDIDFVQCDIRNLEWR--G----HVDTVVMNPPFGTRKK-G-VDMDFLSMALKVAS-QAVYSLHKTS 153 (212)
Q Consensus 94 -----~--~-~~v~~~~~d~~~~~~~--~----~~D~i~~nppy~~~~~-~-~~~~~l~~~~~~~~-~~~~~~~~~~ 153 (212)
. + .+++++.+|+.+.... . .||+|+.|+ |..... . -...+++...+.++ ++++.++...
T Consensus 140 ~~r~~~~~~~~~l~l~~GDa~~~l~~~~~~~~~~~D~iflD~-fsp~~~p~lw~~~~l~~l~~~L~pGG~l~tysaa 215 (257)
T 2qy6_A 140 CHRLLLDEGRVTLDLWFGDINELISQLDDSLNQKVDAWFLDG-FAPAKNPDMWTQNLFNAMARLARPGGTLATFTSA 215 (257)
T ss_dssp EEEEEEC--CEEEEEEESCHHHHGGGSCGGGTTCEEEEEECS-SCTTTCGGGCCHHHHHHHHHHEEEEEEEEESCCB
T ss_pred hhheeccCCceEEEEEECcHHHHHhhcccccCCeEEEEEECC-CCcccChhhcCHHHHHHHHHHcCCCcEEEEEeCC
Confidence 1 1 2688999998874332 1 699999996 322211 1 13567777777765 3444444433
No 301
>3gcz_A Polyprotein; flavivirus, RNA capping, methyltransferase, viral enzyme STR ATP-binding, nucleotide-binding, RNA replication, structura genomics; HET: SAM; 1.70A {Yokose virus}
Probab=97.89 E-value=2.2e-05 Score=61.86 Aligned_cols=90 Identities=22% Similarity=0.205 Sum_probs=56.1
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHH-cCCCeEEEEeCChHHHHHHHHHHhhcCCce-EEEEc-ccccCc
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATL-LGADQVIAIDIDSDSLELASENAADLELDI-DFVQC-DIRNLE 109 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v-~~~~~-d~~~~~ 109 (212)
++..|..+...+...++.+|||+|||.|..+-.++. .+...|+|+|+..++...+... ...+.++ .+... |+..+.
T Consensus 75 AAfKL~ei~eK~~Lk~~~~VLDLGaAPGGWsQvAa~~~gv~sV~GvdvG~d~~~~pi~~-~~~g~~ii~~~~~~dv~~l~ 153 (282)
T 3gcz_A 75 GSAKLRWMEERGYVKPTGIVVDLGCGRGGWSYYAASLKNVKKVMAFTLGVQGHEKPIMR-TTLGWNLIRFKDKTDVFNME 153 (282)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCCC-CBTTGGGEEEECSCCGGGSC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEeCCCCCHHHHHHHHhcCCCeeeeEEeccCcccccccc-ccCCCceEEeeCCcchhhcC
Confidence 344455555554455778999999999999999885 4666899999976532222110 1112233 33322 444443
Q ss_pred CCCcccEEEEcCCCC
Q 028214 110 WRGHVDTVVMNPPFG 124 (212)
Q Consensus 110 ~~~~~D~i~~nppy~ 124 (212)
. .++|+|++|....
T Consensus 154 ~-~~~DvVLSDmApn 167 (282)
T 3gcz_A 154 V-IPGDTLLCDIGES 167 (282)
T ss_dssp C-CCCSEEEECCCCC
T ss_pred C-CCcCEEEecCccC
Confidence 2 3899999998766
No 302
>3p8z_A Mtase, non-structural protein 5; methyltransferase, RNA, ER, transferase-transferase inhibito; HET: 36A SAH; 1.70A {Dengue virus 3} SCOP: c.66.1.25 PDB: 3p97_A* 2xbm_A* 3evg_A*
Probab=97.77 E-value=2e-05 Score=60.50 Aligned_cols=88 Identities=17% Similarity=0.105 Sum_probs=61.2
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc-ccccCc
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQC-DIRNLE 109 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~-d~~~~~ 109 (212)
....|..+...+...++.+|+|+||++|..+-.++.. +...|+|+|+-..-.+.= ...+..|. .++|.++ |+...+
T Consensus 63 a~~KL~ei~ek~~l~~g~~VvDLGaapGGWSq~~a~~~g~~~V~avdvG~~ghe~P-~~~~s~gwn~v~fk~gvDv~~~~ 141 (267)
T 3p8z_A 63 GSAKLQWFVERNMVIPEGRVIDLGCGRGGWSYYCAGLKKVTEVRGYTKGGPGHEEP-VPMSTYGWNIVKLMSGKDVFYLP 141 (267)
T ss_dssp HHHHHHHHHHTTSSCCCEEEEEESCTTSHHHHHHHTSTTEEEEEEECCCSTTSCCC-CCCCCTTTTSEEEECSCCGGGCC
T ss_pred HHHHHHHHHHhcCCCCCCEEEEcCCCCCcHHHHHHHhcCCCEEEEEecCCCCccCc-chhhhcCcCceEEEeccceeecC
Confidence 3444555555554557889999999999999988754 667899999864322100 11133444 6899999 987666
Q ss_pred CCCcccEEEEcCC
Q 028214 110 WRGHVDTVVMNPP 122 (212)
Q Consensus 110 ~~~~~D~i~~npp 122 (212)
. ..+|.|+||.-
T Consensus 142 ~-~~~DtllcDIg 153 (267)
T 3p8z_A 142 P-EKCDTLLCDIG 153 (267)
T ss_dssp C-CCCSEEEECCC
T ss_pred C-ccccEEEEecC
Confidence 5 47999999865
No 303
>3me5_A Cytosine-specific methyltransferase; structural genomics, protein structure initiative, NEW YORK structural genomix research consortium; 1.75A {Shigella flexneri 2A} PDB: 3lx6_A
Probab=97.72 E-value=3.8e-05 Score=65.55 Aligned_cols=77 Identities=14% Similarity=0.134 Sum_probs=61.1
Q ss_pred CCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------------
Q 028214 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------------- 111 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------------- 111 (212)
.-+++|++||.|.++.-+.+.|...|+++|+|+.+++.-+.|..... ...++++|+.++...
T Consensus 88 ~~~viDLFaG~GGlslG~~~aG~~~v~avE~d~~A~~ty~~N~~~~p-~~~~~~~DI~~i~~~~~~~~~~~~~~~~i~~~ 166 (482)
T 3me5_A 88 AFRFIDLFAGIGGIRRGFESIGGQCVFTSEWNKHAVRTYKANHYCDP-ATHHFNEDIRDITLSHQEGVSDEAAAEHIRQH 166 (482)
T ss_dssp SEEEEEESCTTSHHHHHHHTTTEEEEEEECCCHHHHHHHHHHSCCCT-TTCEEESCTHHHHCTTCTTSCHHHHHHHHHHH
T ss_pred cceEEEecCCccHHHHHHHHCCCEEEEEEeCCHHHHHHHHHhcccCC-CcceeccchhhhhhccccccchhhHHhhhhhc
Confidence 35899999999999999988887779999999999999888873211 345677888776421
Q ss_pred -CcccEEEEcCCCCCC
Q 028214 112 -GHVDTVVMNPPFGTR 126 (212)
Q Consensus 112 -~~~D~i~~nppy~~~ 126 (212)
..+|+++..||+...
T Consensus 167 ~~~~Dvl~gGpPCQ~F 182 (482)
T 3me5_A 167 IPEHDVLLAGFPCQPF 182 (482)
T ss_dssp SCCCSEEEEECCCCCC
T ss_pred CCCCCEEEecCCCcch
Confidence 268999999998765
No 304
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=97.71 E-value=8.1e-05 Score=60.30 Aligned_cols=62 Identities=18% Similarity=0.175 Sum_probs=47.5
Q ss_pred CChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCCh---HHHHHHHHHHhhcC
Q 028214 28 TGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDS---DSLELASENAADLE 95 (212)
Q Consensus 28 ~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~---~~~~~a~~~~~~~~ 95 (212)
.+..+...++.... .+++.|||++||+|..+.++...+. +.+|+|+++ ..++.++++++..+
T Consensus 227 kp~~l~~~~i~~~~-----~~~~~vlDpF~GsGtt~~aa~~~~r-~~ig~e~~~~~~~~~~~~~~Rl~~~~ 291 (319)
T 1eg2_A 227 KPAAVIERLVRALS-----HPGSTVLDFFAGSGVTARVAIQEGR-NSICTDAAPVFKEYYQKQLTFLQDDG 291 (319)
T ss_dssp CCHHHHHHHHHHHS-----CTTCEEEETTCTTCHHHHHHHHHTC-EEEEEESSTHHHHHHHHHHHHC----
T ss_pred CCHHHHHHHHHHhC-----CCCCEEEecCCCCCHHHHHHHHcCC-cEEEEECCccHHHHHHHHHHHHHHcc
Confidence 34555655554432 3788999999999999999998865 899999999 99999999987553
No 305
>3lkz_A Non-structural protein 5; flavivirus, methyltransferase, inhibitor, P nucleotide-binding, RNA replication, viral protein; HET: SFG; 2.00A {West nile virus}
Probab=97.64 E-value=0.00014 Score=57.63 Aligned_cols=87 Identities=14% Similarity=0.010 Sum_probs=58.9
Q ss_pred HHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEc-ccccCcC
Q 028214 34 SRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLEL-DIDFVQC-DIRNLEW 110 (212)
Q Consensus 34 ~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~-d~~~~~~ 110 (212)
...|..+.......++.+|+|+||++|..+-.++.. +...|+|+|+-..-.+.= ...+..+. -+.++.+ |+..+++
T Consensus 80 ~~KL~ei~~~~~l~~~~~VlDLGaapGGwsq~~~~~~gv~~V~avdvG~~~he~P-~~~~ql~w~lV~~~~~~Dv~~l~~ 158 (321)
T 3lkz_A 80 TAKLRWLVERRFLEPVGKVIDLGCGRGGWCYYMATQKRVQEVRGYTKGGPGHEEP-QLVQSYGWNIVTMKSGVDVFYRPS 158 (321)
T ss_dssp HHHHHHHHHTTSCCCCEEEEEETCTTCHHHHHHTTCTTEEEEEEECCCSTTSCCC-CCCCBTTGGGEEEECSCCTTSSCC
T ss_pred HHHHHHHHHhcCCCCCCEEEEeCCCCCcHHHHHHhhcCCCEEEEEEcCCCCccCc-chhhhcCCcceEEEeccCHhhCCC
Confidence 334445555445557789999999999999988754 667899999865311100 00011222 3788888 8877766
Q ss_pred CCcccEEEEcCC
Q 028214 111 RGHVDTVVMNPP 122 (212)
Q Consensus 111 ~~~~D~i~~npp 122 (212)
..+|+|+||.-
T Consensus 159 -~~~D~ivcDig 169 (321)
T 3lkz_A 159 -ECCDTLLCDIG 169 (321)
T ss_dssp -CCCSEEEECCC
T ss_pred -CCCCEEEEECc
Confidence 47999999987
No 306
>2wk1_A NOVP; transferase, O-methyltransferase, novobiocin, TYLF superfamily; HET: SAH; 1.40A {Streptomyces caeruleus}
Probab=97.64 E-value=0.00052 Score=54.52 Aligned_cols=101 Identities=13% Similarity=0.015 Sum_probs=70.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc------CCCeEEEEeCChH--------------------------HHHHHHHHHhhcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL------GADQVIAIDIDSD--------------------------SLELASENAADLE 95 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~------~~~~v~~~D~~~~--------------------------~~~~a~~~~~~~~ 95 (212)
.+..|||+|+..|..++.++.. ...+++++|..+. .++.+++|++..+
T Consensus 106 ~pg~IlEiGv~~G~Sai~ma~~l~~~g~~~~kI~~~DtfeG~pe~~~~~~~~d~~~~~~~~~~~~~~~~~~ar~n~~~~g 185 (282)
T 2wk1_A 106 VPGDLVETGVWRGGACILMRGILRAHDVRDRTVWVADSFQGIPDVGEDGYAGDRKMALHRRNSVLAVSEEEVRRNFRNYD 185 (282)
T ss_dssp CCCEEEEECCTTSHHHHHHHHHHHHTTCCSCCEEEEECSSCSCCCCTTSCHHHHHHCGGGGHHHHCCCHHHHHHHHHHTT
T ss_pred CCCcEEEeecCchHHHHHHHHHhHhcCCCCCEEEEEECCCCCCcccccccccccccccccccccchhHHHHHHHHHHHcC
Confidence 5679999999999988877643 2458999996421 4677899998877
Q ss_pred C---ceEEEEcccccCcCC---CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEEecC
Q 028214 96 L---DIDFVQCDIRNLEWR---GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSLHKT 152 (212)
Q Consensus 96 ~---~v~~~~~d~~~~~~~---~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~~~~ 152 (212)
. +++++.||+.+.... .+||+|+.|.- ........++.+..... +++.++.+.
T Consensus 186 l~~~~I~li~Gda~etL~~~~~~~~d~vfIDaD----~y~~~~~~Le~~~p~L~pGGiIv~DD~ 245 (282)
T 2wk1_A 186 LLDEQVRFLPGWFKDTLPTAPIDTLAVLRMDGD----LYESTWDTLTNLYPKVSVGGYVIVDDY 245 (282)
T ss_dssp CCSTTEEEEESCHHHHSTTCCCCCEEEEEECCC----SHHHHHHHHHHHGGGEEEEEEEEESSC
T ss_pred CCcCceEEEEeCHHHHHhhCCCCCEEEEEEcCC----ccccHHHHHHHHHhhcCCCEEEEEcCC
Confidence 5 699999999875432 27999999852 11223456777666654 344444443
No 307
>2px2_A Genome polyprotein [contains: capsid protein C (core protein); envelope protein M...; methyltransferase, SAH; HET: SAH; 2.00A {Murray valley encephalitis virus} PDB: 2px4_A* 2px5_A* 2pxa_A* 2pxc_A* 2px8_A* 2oy0_A*
Probab=97.20 E-value=0.0016 Score=50.65 Aligned_cols=88 Identities=14% Similarity=0.057 Sum_probs=52.0
Q ss_pred HHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhh-cCCc-eEEEEc-ccccC
Q 028214 33 ASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAAD-LELD-IDFVQC-DIRNL 108 (212)
Q Consensus 33 ~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~-~~~~-v~~~~~-d~~~~ 108 (212)
++.-|..+....-..++.+|+|+||+.|.-+-.++.. +...|.|.++..+. . ....... .|++ +++.++ |+.+.
T Consensus 58 AayKL~EIdeK~likpg~~VVDLGaAPGGWSQvAa~~~~vg~V~G~vig~D~-~-~~P~~~~~~Gv~~i~~~~G~Df~~~ 135 (269)
T 2px2_A 58 GTAKLRWLVERRFVQPIGKVVDLGCGRGGWSYYAATMKNVQEVRGYTKGGPG-H-EEPMLMQSYGWNIVTMKSGVDVFYK 135 (269)
T ss_dssp HHHHHHHHHHTTSCCCCEEEEEETCTTSHHHHHHTTSTTEEEEEEECCCSTT-S-CCCCCCCSTTGGGEEEECSCCGGGS
T ss_pred HHHHHHHHHHcCCCCCCCEEEEcCCCCCHHHHHHhhhcCCCCceeEEEcccc-c-cCCCcccCCCceEEEeeccCCccCC
Confidence 4444555555543446889999999999999999875 22233444443321 0 0000000 2222 456668 99885
Q ss_pred cCCCcccEEEEcCCC
Q 028214 109 EWRGHVDTVVMNPPF 123 (212)
Q Consensus 109 ~~~~~~D~i~~nppy 123 (212)
.. ..+|+|+||..=
T Consensus 136 ~~-~~~DvVLSDMAP 149 (269)
T 2px2_A 136 PS-EISDTLLCDIGE 149 (269)
T ss_dssp CC-CCCSEEEECCCC
T ss_pred CC-CCCCEEEeCCCC
Confidence 43 379999999753
No 308
>3swr_A DNA (cytosine-5)-methyltransferase 1; epigenetics, DNA methyltransferase fold, maintenance methyla transferase; HET: DNA SFG MES; 2.49A {Homo sapiens} PDB: 3pta_A* 3pt6_A* 3pt9_A* 4da4_A*
Probab=97.19 E-value=0.00085 Score=61.92 Aligned_cols=74 Identities=22% Similarity=0.246 Sum_probs=57.6
Q ss_pred CCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC-----------------cC
Q 028214 49 NKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-----------------EW 110 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~-----------------~~ 110 (212)
.-+++|++||.|.++.-+...|. ..+.++|+++.+++.-+.|.. ...++.+|+.++ +.
T Consensus 540 ~l~~iDLFaG~GGlslGl~~AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~~di~~~~~~~lp~ 615 (1002)
T 3swr_A 540 KLRTLDVFSGCGGLSEGFHQAGISDTLWAIEMWDPAAQAFRLNNP----GSTVFTEDCNILLKLVMAGETTNSRGQRLPQ 615 (1002)
T ss_dssp CEEEEEESCTTSHHHHHHHHHTSEEEEEEECSSHHHHHHHHHHCT----TSEEECSCHHHHHHHHHHTCSBCTTCCBCCC
T ss_pred CCeEEEeccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC----CCccccccHHHHhhhccchhhhhhhhhhccc
Confidence 34899999999999999888876 578899999999998888864 345666665322 11
Q ss_pred CCcccEEEEcCCCCCC
Q 028214 111 RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 111 ~~~~D~i~~nppy~~~ 126 (212)
...+|+|+..||....
T Consensus 616 ~~~vDll~GGpPCQ~F 631 (1002)
T 3swr_A 616 KGDVEMLCGGPPCQGF 631 (1002)
T ss_dssp TTTCSEEEECCCCTTC
T ss_pred CCCeeEEEEcCCCcch
Confidence 2268999999998765
No 309
>3eld_A Methyltransferase; flavivirus, RNA capping, guanylyltransfer viral enzyme structure; HET: SFG; 1.90A {Wesselsbron virus} PDB: 3elu_A* 3elw_A* 3ely_A* 3emb_A* 3emd_A*
Probab=97.14 E-value=0.0018 Score=51.45 Aligned_cols=76 Identities=18% Similarity=0.196 Sum_probs=47.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCce-EEEEc-ccccCcCCCcccEEEEcCCC
Q 028214 47 VSNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDI-DFVQC-DIRNLEWRGHVDTVVMNPPF 123 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v-~~~~~-d~~~~~~~~~~D~i~~nppy 123 (212)
.++++|||+||++|..+-.+++. +...|+|+|+.......... ....+.++ .+..+ |+..+. ...+|+|++|..-
T Consensus 80 ~~g~~vlDLGaaPGgWsqva~~~~gv~sV~Gvdlg~~~~~~P~~-~~~~~~~iv~~~~~~di~~l~-~~~~DlVlsD~AP 157 (300)
T 3eld_A 80 RITGRVLDLGCGRGGWSYYAAAQKEVMSVKGYTLGIEGHEKPIH-MQTLGWNIVKFKDKSNVFTMP-TEPSDTLLCDIGE 157 (300)
T ss_dssp CCCEEEEEETCTTCHHHHHHHTSTTEEEEEEECCCCTTSCCCCC-CCBTTGGGEEEECSCCTTTSC-CCCCSEEEECCCC
T ss_pred CCCCEEEEcCCCCCHHHHHHHHhcCCceeeeEEecccccccccc-ccccCCceEEeecCceeeecC-CCCcCEEeecCcC
Confidence 47789999999999999999964 56689999986532110000 00111122 23222 443332 2389999999765
Q ss_pred C
Q 028214 124 G 124 (212)
Q Consensus 124 ~ 124 (212)
.
T Consensus 158 n 158 (300)
T 3eld_A 158 S 158 (300)
T ss_dssp C
T ss_pred C
Confidence 5
No 310
>4ft4_B DNA (cytosine-5)-methyltransferase 1; chromodomain, BAH domain, DNA methyltransferase domain, H3K9 binding, methylation, transferase; HET: DNA MLY SAH; 2.70A {Zea mays} PDB: 4ft2_A* 4fsx_A*
Probab=97.12 E-value=0.0012 Score=59.74 Aligned_cols=45 Identities=20% Similarity=0.276 Sum_probs=37.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHcC------CCeEEEEeCChHHHHHHHHHHh
Q 028214 48 SNKVVADFGCGCGTLGAAATLLG------ADQVIAIDIDSDSLELASENAA 92 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~------~~~v~~~D~~~~~~~~a~~~~~ 92 (212)
+..+++|++||.|.++.-+.+.| ...+.++|+|+.+++.-+.|..
T Consensus 211 k~ltvIDLFAG~GGls~Gfe~AG~~~~~~f~vv~AvE~d~~A~~Ty~~Nhp 261 (784)
T 4ft4_B 211 RTATLLDLYSGCGGMSTGLCLGAALSGLKLETRWAVDFNSFACQSLKYNHP 261 (784)
T ss_dssp EEEEEEEETCTTSHHHHHHHHHHHHHTEEEEEEEEEESCHHHHHHHHHHCT
T ss_pred CCCeEEEeCcCccHHHHHHHHhCcccCCceeEEEEEeCCHHHHHHHHHHCC
Confidence 34589999999999887776654 3578899999999999988864
No 311
>3b5i_A S-adenosyl-L-methionine:salicylic acid carboxyl methyltransferase-like protein; sabath family, indole-3-acetic acid, S-AD methionine; HET: SAH; 2.75A {Arabidopsis thaliana}
Probab=96.90 E-value=0.05 Score=44.82 Aligned_cols=94 Identities=12% Similarity=0.015 Sum_probs=54.7
Q ss_pred HHHHHHHHhhcCCCC-----CCEEEEEcCCcChHHHHHHHc----------------CCCeEEEEeCChHHHHHHHHHHh
Q 028214 34 SRMLYTAENSFGDVS-----NKVVADFGCGCGTLGAAATLL----------------GADQVIAIDIDSDSLELASENAA 92 (212)
Q Consensus 34 ~~~l~~~~~~~~~~~-----~~~vlDlg~G~G~~~~~~~~~----------------~~~~v~~~D~~~~~~~~a~~~~~ 92 (212)
..++..+...+.... ..+|+|+|||+|..++.++.. +.-+|+..|+-..-....=+.+.
T Consensus 33 ~~~~~~ai~~l~~~~~~~~~~~~IaDlGCssG~Nt~~~v~~ii~~i~~~~~~~~~~~pe~~v~~nDLp~NDFn~lF~~L~ 112 (374)
T 3b5i_A 33 LHLLEETLENVHLNSSASPPPFTAVDLGCSSGANTVHIIDFIVKHISKRFDAAGIDPPEFTAFFSDLPSNDFNTLFQLLP 112 (374)
T ss_dssp HHHHHHHHHTSCCCCSSSCCCEEEEEETCCSSHHHHHHHHHHHHHHHHHHHHTTCCCCCEEEEEEECTTSCHHHHHHHSC
T ss_pred HHHHHHHHHHhhccccCCCCceEEEecCCCCChhHHHHHHHHHHHHHHHHhhcCCCCCceeEEecCCCccchHHHHhhhh
Confidence 445555555443322 468999999999987776321 23378888875444322222222
Q ss_pred hc-------------C---CceEEEEcccccCcCCC-cccEEEEcCCCCCCC
Q 028214 93 DL-------------E---LDIDFVQCDIRNLEWRG-HVDTVVMNPPFGTRK 127 (212)
Q Consensus 93 ~~-------------~---~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~~~ 127 (212)
.. + .=+.-+-+.+..-..+. ++|+|+++-.+||..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~f~~gvpgSFy~rlfP~~S~d~v~Ss~aLHWls 164 (374)
T 3b5i_A 113 PLVSNTCMEECLAADGNRSYFVAGVPGSFYRRLFPARTIDFFHSAFSLHWLS 164 (374)
T ss_dssp CBCCCC--CCC---CCCBCSEEEEEESCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred hhhhhcchhhhccccCCCceEEEecChhhhcccCCCcceEEEEecceeeeec
Confidence 11 0 01223444444444444 999999999999974
No 312
>3av4_A DNA (cytosine-5)-methyltransferase 1; CXXC-type zinc finger/C5-methyltransferase family; HET: DNA; 2.75A {Mus musculus} PDB: 3av5_A* 3av6_A*
Probab=96.84 E-value=0.0032 Score=59.66 Aligned_cols=75 Identities=20% Similarity=0.244 Sum_probs=57.6
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCC-CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC-----------------c
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGA-DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL-----------------E 109 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~-----------------~ 109 (212)
+..+++|++||.|.++.-+...|. ..+.++|+++.+++.-+.|.. ...++.+|+.++ +
T Consensus 850 ~~l~viDLFsG~GGlslGfe~AG~~~vv~avEid~~A~~ty~~N~p----~~~~~~~DI~~l~~~~~~gdi~~~~~~~lp 925 (1330)
T 3av4_A 850 PKLRTLDVFSGCGGLSEGFHQAGISETLWAIEMWDPAAQAFRLNNP----GTTVFTEDCNVLLKLVMAGEVTNSLGQRLP 925 (1330)
T ss_dssp CCEEEEEETCTTSHHHHHHHHTTSEEEEEEECCSHHHHHHHHHHCT----TSEEECSCHHHHHHHHTTTCSBCSSCCBCC
T ss_pred CCceEEecccCccHHHHHHHHCCCCceEEEEECCHHHHHHHHHhCC----CCcEeeccHHHHhHhhhccchhhhhhhhcc
Confidence 345899999999999999888875 578999999999999888864 344555554321 1
Q ss_pred CCCcccEEEEcCCCCCC
Q 028214 110 WRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 110 ~~~~~D~i~~nppy~~~ 126 (212)
....+|+|+..||....
T Consensus 926 ~~~~vDvl~GGpPCQ~F 942 (1330)
T 3av4_A 926 QKGDVEMLCGGPPCQGF 942 (1330)
T ss_dssp CTTTCSEEEECCCCTTT
T ss_pred ccCccceEEecCCCccc
Confidence 11268999999999776
No 313
>4dkj_A Cytosine-specific methyltransferase; CG-specificity, DNA intercalation, CPG sequence, cytosine C5 methylation; HET: DNA C37 5CM SAH; 2.15A {Mycoplasma penetrans}
Probab=96.79 E-value=0.0021 Score=53.67 Aligned_cols=77 Identities=12% Similarity=-0.034 Sum_probs=57.3
Q ss_pred CEEEEEcCCcChHHHHHHHcC--CCe----EEEEeCChHHHHHHHHHHhhcCCc--------------------------
Q 028214 50 KVVADFGCGCGTLGAAATLLG--ADQ----VIAIDIDSDSLELASENAADLELD-------------------------- 97 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~~--~~~----v~~~D~~~~~~~~a~~~~~~~~~~-------------------------- 97 (212)
-+++|++||.|.++..+.+.| ... |.++|+|+.+++.-+.|.......
T Consensus 11 lrvldLFsGiGG~~~Gl~~aG~~~~~~~~~v~avEid~~A~~ty~~n~~~~~~~~~~~~~~~l~~~s~d~k~~~~~~~i~ 90 (403)
T 4dkj_A 11 IKVFEAFAGIGSQFKALKNIARSKNWEIQHSGMVEWFVDAIVSYVAIHSKNFNPKIERLDRDILSISNDSKMPISEYGIK 90 (403)
T ss_dssp EEEEEETCTTCHHHHHHHHHHHHHTEEEEEEEEECCBHHHHHHHHHHHCSSCCCCCBCCCTTCCCCBSSSSSCCCHHHHH
T ss_pred ceEEEEecCcCHHHHHHHHhCCccccceeeEEEEecCHHHHHHHHHHcCCCcccchhhhhhhhhhccccccccccccccc
Confidence 489999999999988888765 344 889999999999988887542100
Q ss_pred ------eE----------EEEcccccCcCCC---cccEEEEcCCCCCC
Q 028214 98 ------ID----------FVQCDIRNLEWRG---HVDTVVMNPPFGTR 126 (212)
Q Consensus 98 ------v~----------~~~~d~~~~~~~~---~~D~i~~nppy~~~ 126 (212)
.. ...+|+.++.... .+|+++..||+...
T Consensus 91 ~l~~~~l~~i~~~~~~~~~~~~DI~~i~~~~ip~~vDll~ggpPCQ~f 138 (403)
T 4dkj_A 91 KINNTIKASYLNYAKKHFNNLFDIKKVNKDNFPKNIDIFTYSFPCQDL 138 (403)
T ss_dssp HHTTBHHHHHHHHHHHHSCBCCCGGGCCTTTSCSSCSEEEECCCCTTT
T ss_pred cccHHHHHHHHhhcccCCCcccchhhcCHhhCCCCCcEEEEeCCCCCH
Confidence 00 0347777765544 47999999998665
No 314
>2efj_A 3,7-dimethylxanthine methyltransferase; SAM-dependant methyltransferase, SAH, theobromine; HET: SAH 37T; 2.00A {Coffea canephora} PDB: 2eg5_A*
Probab=96.69 E-value=0.0072 Score=50.00 Aligned_cols=78 Identities=9% Similarity=-0.004 Sum_probs=47.5
Q ss_pred CCEEEEEcCCcChHHHHHHHc------------------CCCeEEEEeCC-----------hHHHHHHHHHHhhcCCceE
Q 028214 49 NKVVADFGCGCGTLGAAATLL------------------GADQVIAIDID-----------SDSLELASENAADLELDID 99 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~------------------~~~~v~~~D~~-----------~~~~~~a~~~~~~~~~~v~ 99 (212)
..+|+|+||++|..++.+... +.-+|+..|+- +...+.+++... ...+.-
T Consensus 53 ~~~IaDlGCssG~NT~~~v~~ii~~i~~~~~~~~~~~~~pe~~v~~nDLp~NDFN~lF~~L~~~~~~~~~~~g-~~~~~~ 131 (384)
T 2efj_A 53 CFKVGDLGCASGPNTFSTVRDIVQSIDKVGQEKKNELERPTIQIFLNDLFQNDFNSVFKLLPSFYRNLEKENG-RKIGSC 131 (384)
T ss_dssp EEEEEEETCCSSHHHHHHHHHHHHHHTCC----------CEEEEEEECCTTSCHHHHHHHHHHHHHHHHHHTC-CCTTSE
T ss_pred ceEEEecCCCCCchHHHHHHHHHHHHHHHhhhcccCCCCCceEEEecCCCccchHHHHhhhhhhHhhhhhhcc-CCCCce
Confidence 468999999999988777653 12367788875 322332222110 001223
Q ss_pred EE---EcccccCcCCC-cccEEEEcCCCCCCC
Q 028214 100 FV---QCDIRNLEWRG-HVDTVVMNPPFGTRK 127 (212)
Q Consensus 100 ~~---~~d~~~~~~~~-~~D~i~~nppy~~~~ 127 (212)
++ .+.+..-..+. ++|+|+++-.+||..
T Consensus 132 f~~gvpgSFy~rlfp~~S~d~v~Ss~aLHWls 163 (384)
T 2efj_A 132 LIGAMPGSFYSRLFPEESMHFLHSCYCLHWLS 163 (384)
T ss_dssp EEEECCSCTTSCCSCTTCEEEEEEESCTTBCS
T ss_pred EEEecchhhhhccCCCCceEEEEecceeeecC
Confidence 33 34444444444 999999999999974
No 315
>2py6_A Methyltransferase FKBM; YP_546752.1, structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; 2.15A {Methylobacillus flagellatus KT} SCOP: c.66.1.56
Probab=96.67 E-value=0.0075 Score=50.39 Aligned_cols=60 Identities=18% Similarity=0.191 Sum_probs=47.5
Q ss_pred CCCCEEEEEcCCcChHHHHHH-Hc-C-CCeEEEEeCChHHHHHHHHHHhh--c-C--CceEEEEcccc
Q 028214 47 VSNKVVADFGCGCGTLGAAAT-LL-G-ADQVIAIDIDSDSLELASENAAD--L-E--LDIDFVQCDIR 106 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~-~~-~-~~~v~~~D~~~~~~~~a~~~~~~--~-~--~~v~~~~~d~~ 106 (212)
.++..++|+||+.|..++.++ +. + ..+|+++|.+|..++.+++|++. | + .++++++.-+.
T Consensus 225 ~~~~~viDvGAn~G~~s~~~a~~~~~~~~~V~afEP~p~~~~~L~~n~~~~~N~~~~~~v~~~~~al~ 292 (409)
T 2py6_A 225 SDSEKMVDCGASIGESLAGLIGVTKGKFERVWMIEPDRINLQTLQNVLRRYTDTNFASRITVHGCGAG 292 (409)
T ss_dssp CSSCEEEEETCTTSHHHHHHHHHHTSCCSEEEEECCCHHHHHHHHHHHHHTTTSTTGGGEEEECSEEC
T ss_pred CCCCEEEECCCCcCHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhhhccCCCCCEEEEEeEEE
Confidence 477899999999999999887 43 3 36999999999999999999987 2 1 25666554443
No 316
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=95.78 E-value=0.029 Score=43.72 Aligned_cols=76 Identities=21% Similarity=0.286 Sum_probs=59.5
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++++|--|+++|+ ++..+++.|+ +|+.+|.+++.++.+.+.++..+.++.+++.|+.+...-
T Consensus 4 sL~gKvalVTGas~GIG~aiA~~la~~Ga-~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 82 (254)
T 4fn4_A 4 SLKNKVVIVTGAGSGIGRAIAKKFALNDS-IVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETY 82 (254)
T ss_dssp GGTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3588999999988875 4555556565 899999999999888888887777889999999875331
Q ss_pred CcccEEEEcCC
Q 028214 112 GHVDTVVMNPP 122 (212)
Q Consensus 112 ~~~D~i~~npp 122 (212)
.+.|+++.|--
T Consensus 83 G~iDiLVNNAG 93 (254)
T 4fn4_A 83 SRIDVLCNNAG 93 (254)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCc
Confidence 17899998864
No 317
>1m6e_X S-adenosyl-L-methionnine:salicylic acid carboxyl methyltransferase; rossmann fold, protein-small molecule complex; HET: SAH SAL; 3.00A {Clarkia breweri} SCOP: c.66.1.35
Probab=95.65 E-value=0.027 Score=46.12 Aligned_cols=79 Identities=13% Similarity=0.063 Sum_probs=53.4
Q ss_pred CCEEEEEcCCcChHHHHHHHc-----------------CCCeEEEEeCChHHHHHHHHHHhhc----CC-ceEEEEcccc
Q 028214 49 NKVVADFGCGCGTLGAAATLL-----------------GADQVIAIDIDSDSLELASENAADL----EL-DIDFVQCDIR 106 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~-----------------~~~~v~~~D~~~~~~~~a~~~~~~~----~~-~v~~~~~d~~ 106 (212)
.-+|+|+||++|..++.+... +.-+|+..|+-..-...+-+++... +. =+.-+.+.+.
T Consensus 52 ~~~IaDlGCs~G~Nt~~~v~~ii~~i~~~~~~~~~~~~pe~~v~~nDLp~NDFntlF~~L~~~~~~~~~~f~~gvpgSFy 131 (359)
T 1m6e_X 52 RLAIADLGCSSGPNALFAVTELIKTVEELRKKMGRENSPEYQIFLNDLPGNDFNAIFRSLPIENDVDGVCFINGVPGSFY 131 (359)
T ss_dssp EECCEEESCCSSTTTTTGGGTTHHHHHHHHHSSSCSSCCEEEEEEEECTTSCHHHHHTTTTTSCSCTTCEEEEEEESCSS
T ss_pred ceEEEecCCCCCcchHHHHHHHHHHHHHHHHhcCCCCCCceEEEecCCCchHHHHHHHhcchhcccCCCEEEEecchhhh
Confidence 357999999999866655432 1237889998777777766665431 11 1233455555
Q ss_pred cCcCCC-cccEEEEcCCCCCCC
Q 028214 107 NLEWRG-HVDTVVMNPPFGTRK 127 (212)
Q Consensus 107 ~~~~~~-~~D~i~~nppy~~~~ 127 (212)
.-..+. ++|+|+++-.+||..
T Consensus 132 ~rlfp~~S~d~v~Ss~aLHWls 153 (359)
T 1m6e_X 132 GRLFPRNTLHFIHSSYSLMWLS 153 (359)
T ss_dssp SCCSCTTCBSCEEEESCTTBCS
T ss_pred hccCCCCceEEEEehhhhhhcc
Confidence 555544 999999999999973
No 318
>2zig_A TTHA0409, putative modification methylase; methyltransferase, S- adenosylmethionine, structural genomics, NPPSFA; 2.10A {Thermus thermophilus} PDB: 2zie_A* 2zif_A
Probab=95.38 E-value=0.025 Score=45.01 Aligned_cols=30 Identities=27% Similarity=0.256 Sum_probs=23.9
Q ss_pred ceEEEEcccccCcC---CCcccEEEEcCCCCCC
Q 028214 97 DIDFVQCDIRNLEW---RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 97 ~v~~~~~d~~~~~~---~~~~D~i~~nppy~~~ 126 (212)
.++++++|+.+... ..+||+|++||||...
T Consensus 21 ~~~i~~gD~~~~l~~l~~~s~DlIvtdPPY~~~ 53 (297)
T 2zig_A 21 VHRLHVGDAREVLASFPEASVHLVVTSPPYWTL 53 (297)
T ss_dssp CEEEEESCHHHHHTTSCTTCEEEEEECCCCCCC
T ss_pred CCEEEECcHHHHHhhCCCCceeEEEECCCCCCc
Confidence 57899999988432 2389999999999754
No 319
>3r24_A NSP16, 2'-O-methyl transferase; methyltransferase, zinc-finger, transferase, viral protein; HET: SAM; 2.00A {Sars coronavirus}
Probab=95.36 E-value=0.018 Score=45.77 Aligned_cols=63 Identities=19% Similarity=0.136 Sum_probs=43.4
Q ss_pred CCCEEEEEcC------CcChHHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEE
Q 028214 48 SNKVVADFGC------GCGTLGAAATLLGA--DQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~------G~G~~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~ 119 (212)
.+++|||+|| ..|. ..+.+.+. ..|+++|+++-.. .. . .++++|+.+.....+||+|++
T Consensus 109 ~gmrVLDLGA~s~kg~APGS--~VLr~~~p~g~~VVavDL~~~~s--------da--~-~~IqGD~~~~~~~~k~DLVIS 175 (344)
T 3r24_A 109 YNMRVIHFGAGSDKGVAPGT--AVLRQWLPTGTLLVDSDLNDFVS--------DA--D-STLIGDCATVHTANKWDLIIS 175 (344)
T ss_dssp TTCEEEEESCCCTTSBCHHH--HHHHHHSCTTCEEEEEESSCCBC--------SS--S-EEEESCGGGEEESSCEEEEEE
T ss_pred CCCEEEeCCCCCCCCCCCcH--HHHHHhCCCCcEEEEeeCccccc--------CC--C-eEEEccccccccCCCCCEEEe
Confidence 5789999997 4555 23333333 3899999987331 11 2 459999877666568999999
Q ss_pred cCCC
Q 028214 120 NPPF 123 (212)
Q Consensus 120 nppy 123 (212)
|..=
T Consensus 176 DMAP 179 (344)
T 3r24_A 176 DMYD 179 (344)
T ss_dssp CCCC
T ss_pred cCCC
Confidence 8753
No 320
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=94.59 E-value=0.12 Score=40.22 Aligned_cols=79 Identities=23% Similarity=0.203 Sum_probs=59.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
++++++|--|++.|+ ++..+++.|. +|+.+|.+++.++.+.+.+...+.++..++.|+.+...- .
T Consensus 7 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 85 (255)
T 4g81_D 7 LTGKTALVTGSARGLGFAYAEGLAAAGA-RVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGI 85 (255)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCC
Confidence 578999998887775 4555555566 899999999988888777777776888899998764321 1
Q ss_pred cccEEEEcCCCCCC
Q 028214 113 HVDTVVMNPPFGTR 126 (212)
Q Consensus 113 ~~D~i~~nppy~~~ 126 (212)
+.|+++.|--....
T Consensus 86 ~iDiLVNNAG~~~~ 99 (255)
T 4g81_D 86 HVDILINNAGIQYR 99 (255)
T ss_dssp CCCEEEECCCCCCC
T ss_pred CCcEEEECCCCCCC
Confidence 78999988765443
No 321
>1g60_A Adenine-specific methyltransferase MBOIIA; structural genomics, DNA methylation, S- adenosylmethionine, PSI, protein structure initiative; HET: SAM; 1.74A {Moraxella bovis} SCOP: c.66.1.11
Probab=92.98 E-value=0.36 Score=37.38 Aligned_cols=29 Identities=17% Similarity=0.255 Sum_probs=21.3
Q ss_pred eEEEEcccccCcC---CCcccEEEEcCCCCCC
Q 028214 98 IDFVQCDIRNLEW---RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 98 v~~~~~d~~~~~~---~~~~D~i~~nppy~~~ 126 (212)
.+++++|+.+... ..+||+|++||||...
T Consensus 5 ~~l~~gD~~~~l~~l~~~~vdlI~~DPPY~~~ 36 (260)
T 1g60_A 5 NKIHQMNCFDFLDQVENKSVQLAVIDPPYNLS 36 (260)
T ss_dssp SSEEECCHHHHHHHSCTTCEEEEEECCCCSSC
T ss_pred CeEEechHHHHHHhccccccCEEEECCCCCCC
Confidence 3578888765432 2389999999999754
No 322
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=92.81 E-value=0.67 Score=35.78 Aligned_cols=76 Identities=13% Similarity=0.073 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC------cccEE
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG------HVDTV 117 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~------~~D~i 117 (212)
++++++|--|+++|+ +...+++.|. +|+..|.+.. +.+.+.++..+.++..++.|+.+...-. +.|++
T Consensus 7 L~GKvalVTGas~GIG~aiA~~la~~Ga-~Vvi~~r~~~--~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiL 83 (247)
T 4hp8_A 7 LEGRKALVTGANTGLGQAIAVGLAAAGA-EVVCAARRAP--DETLDIIAKDGGNASALLIDFADPLAAKDSFTDAGFDIL 83 (247)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCC--HHHHHHHHHTTCCEEEEECCTTSTTTTTTSSTTTCCCEE
T ss_pred CCCCEEEEeCcCCHHHHHHHHHHHHcCC-EEEEEeCCcH--HHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHhCCCCEE
Confidence 578999998988875 4555566666 8999998743 2333444555557888999988754321 78999
Q ss_pred EEcCCCCC
Q 028214 118 VMNPPFGT 125 (212)
Q Consensus 118 ~~nppy~~ 125 (212)
+.|--...
T Consensus 84 VNNAGi~~ 91 (247)
T 4hp8_A 84 VNNAGIIR 91 (247)
T ss_dssp EECCCCCC
T ss_pred EECCCCCC
Confidence 98865433
No 323
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=92.77 E-value=1.1 Score=34.74 Aligned_cols=78 Identities=28% Similarity=0.269 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccCcCC
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.+ ...++.+...+...+.++.++..|+.+...-
T Consensus 8 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 86 (287)
T 3pxx_A 8 VQDKVVLVTGGARGQGRSHAVKLAEEGA-DIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAV 86 (287)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-eEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHH
Confidence 467889988876654 3444445555 89999987 6666666666665555788999998875321
Q ss_pred -----------CcccEEEEcCCCCC
Q 028214 112 -----------GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 -----------~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 87 ~~~~~~~~~~~g~id~lv~nAg~~~ 111 (287)
T 3pxx_A 87 SRELANAVAEFGKLDVVVANAGICP 111 (287)
T ss_dssp HHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCcCc
Confidence 16899998876543
No 324
>1zkd_A DUF185; NESG, RPR58, structural genomics, PSI, protein structure INI northeast structural genomics consortium, unknown function; 2.10A {Rhodopseudomonas palustris} SCOP: c.66.1.52
Probab=92.60 E-value=1.3 Score=36.51 Aligned_cols=46 Identities=20% Similarity=0.123 Sum_probs=33.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHc--------CCCeEEEEeCChHHHHHHHHHHhh
Q 028214 48 SNKVVADFGCGCGTLGAAATLL--------GADQVIAIDIDSDSLELASENAAD 93 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~--------~~~~v~~~D~~~~~~~~a~~~~~~ 93 (212)
.+-.|+|+|+|+|.++.-+.+. ...+++.+|+|+...+.=++++..
T Consensus 80 ~~~~ivElGaG~GtLa~diL~~l~~~p~~~~~~~y~iVE~Sp~Lr~~Q~~~L~~ 133 (387)
T 1zkd_A 80 QTLRLIEIGPGRGTMMADALRALRVLPILYQSLSVHLVEINPVLRQKQQTLLAG 133 (387)
T ss_dssp SSEEEEEECCTTSHHHHHHHHHHTTSHHHHTTEEEEEECCCHHHHHHHHHHSTT
T ss_pred CCcEEEEECCCcchHHHHHHHHHHhCCccccccEEEEEecCHHHHHHHHHHhcC
Confidence 3447999999999987766532 133899999999877755555543
No 325
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=92.33 E-value=1.4 Score=34.54 Aligned_cols=75 Identities=23% Similarity=0.206 Sum_probs=53.8
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++++|--|+++|+ ++..+++.|+ +|+.+|.+++.++.+.+.+ +.++..++.|+.+...-
T Consensus 26 rL~gKvalVTGas~GIG~aiA~~la~~Ga-~V~i~~r~~~~l~~~~~~~---g~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 101 (273)
T 4fgs_A 26 RLNAKIAVITGATSGIGLAAAKRFVAEGA-RVFITGRRKDVLDAAIAEI---GGGAVGIQADSANLAELDRLYEKVKAEA 101 (273)
T ss_dssp TTTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred hhCCCEEEEeCcCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHc---CCCeEEEEecCCCHHHHHHHHHHHHHHc
Confidence 3588999999988875 4555556566 8999999998877665444 33677888998765321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
.+.|+++.|.-..
T Consensus 102 G~iDiLVNNAG~~ 114 (273)
T 4fgs_A 102 GRIDVLFVNAGGG 114 (273)
T ss_dssp SCEEEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1689999887543
No 326
>1boo_A Protein (N-4 cytosine-specific methyltransferase PVU II); type II DNA-(cytosine N4) methyltransferase, amino methylation, selenomethionine; HET: SAH; 2.80A {Proteus vulgaris} SCOP: c.66.1.11
Probab=92.31 E-value=0.15 Score=40.96 Aligned_cols=30 Identities=20% Similarity=0.252 Sum_probs=23.4
Q ss_pred ceEEEEcccccCc---CCCcccEEEEcCCCCCC
Q 028214 97 DIDFVQCDIRNLE---WRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 97 ~v~~~~~d~~~~~---~~~~~D~i~~nppy~~~ 126 (212)
...++++|..+.. ...+||+|++||||...
T Consensus 14 ~~~ii~gD~~~~l~~l~~~svDlI~tDPPY~~~ 46 (323)
T 1boo_A 14 NGSMYIGDSLELLESFPEESISLVMTSPPFALQ 46 (323)
T ss_dssp SEEEEESCHHHHGGGSCSSCEEEEEECCCCSSS
T ss_pred CceEEeCcHHHHHhhCCCCCeeEEEECCCCCCC
Confidence 5789999987642 22389999999999765
No 327
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=92.30 E-value=1.1 Score=34.45 Aligned_cols=76 Identities=25% Similarity=0.223 Sum_probs=56.3
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+.++.+++.|+.+...- .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 87 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGA-DLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYG 87 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 477899999977664 3444555555 899999999888887777776666889999998875321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
+.|+++.|.-.
T Consensus 88 ~id~lv~nAg~ 98 (264)
T 3ucx_A 88 RVDVVINNAFR 98 (264)
T ss_dssp CCSEEEECCCS
T ss_pred CCcEEEECCCC
Confidence 67999988733
No 328
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=91.95 E-value=1.4 Score=30.15 Aligned_cols=65 Identities=20% Similarity=0.296 Sum_probs=44.1
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC-----CCcccEEEE
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----RGHVDTVVM 119 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~ 119 (212)
.++++-+|+| .++..++ ..|. +|+++|.+++.++.++.. .+.++.+|..+... ...+|+|+.
T Consensus 6 ~~~v~I~G~G--~iG~~la~~L~~~g~-~V~~id~~~~~~~~~~~~------~~~~~~gd~~~~~~l~~~~~~~~d~vi~ 76 (141)
T 3llv_A 6 RYEYIVIGSE--AAGVGLVRELTAAGK-KVLAVDKSKEKIELLEDE------GFDAVIADPTDESFYRSLDLEGVSAVLI 76 (141)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEECCTTCHHHHHHSCCTTCSEEEE
T ss_pred CCEEEEECCC--HHHHHHHHHHHHCCC-eEEEEECCHHHHHHHHHC------CCcEEECCCCCHHHHHhCCcccCCEEEE
Confidence 4578888885 4544444 3344 899999999887776543 36778888766421 127899888
Q ss_pred cCC
Q 028214 120 NPP 122 (212)
Q Consensus 120 npp 122 (212)
..|
T Consensus 77 ~~~ 79 (141)
T 3llv_A 77 TGS 79 (141)
T ss_dssp CCS
T ss_pred ecC
Confidence 665
No 329
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=91.71 E-value=2.1 Score=33.05 Aligned_cols=78 Identities=23% Similarity=0.305 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-------------ChHHHHHHHHHHhhcCCceEEEEcccccCcC
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNLEW 110 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-------------~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|. ++..++...+.+...+.++.++..|+.+...
T Consensus 9 l~~k~~lVTGas~GIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~ 87 (277)
T 3tsc_A 9 LEGRVAFITGAARGQGRAHAVRMAAEGA-DIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDR 87 (277)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred cCCCEEEEECCccHHHHHHHHHHHHcCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 477889988877664 3444455555 8999998 5666666666665555578899999887532
Q ss_pred C-----------CcccEEEEcCCCCC
Q 028214 111 R-----------GHVDTVVMNPPFGT 125 (212)
Q Consensus 111 ~-----------~~~D~i~~nppy~~ 125 (212)
- .+.|+++.|.-...
T Consensus 88 v~~~~~~~~~~~g~id~lvnnAg~~~ 113 (277)
T 3tsc_A 88 LRKVVDDGVAALGRLDIIVANAGVAA 113 (277)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 15899998876543
No 330
>1rjd_A PPM1P, carboxy methyl transferase for protein phosphatase 2A catalytic subunit; SAM dependent methyltransferase; HET: SAM; 1.80A {Saccharomyces cerevisiae} SCOP: c.66.1.37 PDB: 1rje_A* 1rjf_A 1rjg_A* 2ob2_A* 2ob1_A
Probab=91.62 E-value=3.3 Score=33.36 Aligned_cols=99 Identities=14% Similarity=0.202 Sum_probs=66.7
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhc----------------------CCceEEEEcc
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-GADQVIAIDIDSDSLELASENAADL----------------------ELDIDFVQCD 104 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~----------------------~~~v~~~~~d 104 (212)
+...|+.+|||......-+... +...++-+|. |+.++.-++.+... ..+..++..|
T Consensus 97 ~~~qVV~LGaGlDTr~~RL~~~~~~~~~~EvD~-P~vi~~K~~~l~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~v~~D 175 (334)
T 1rjd_A 97 EKVQVVNLGCGSDLRMLPLLQMFPHLAYVDIDY-NESVELKNSILRESEILRISLGLSKEDTAKSPFLIDQGRYKLAACD 175 (334)
T ss_dssp SSEEEEEETCTTCCTHHHHHHHCTTEEEEEEEC-HHHHHHHHHHHHHSHHHHHHHTCCSSCCCCTTEEEECSSEEEEECC
T ss_pred CCcEEEEeCCCCccHHHHhcCcCCCCEEEECCC-HHHHHHHHHHhhhccchhhhcccccccccccccccCCCceEEEecC
Confidence 5679999999999988777753 3346666666 88887777666553 1267888888
Q ss_pred cccCcC----------CCcccEEEEcCCCCCCCCCchHHHHHHHHhhcCceEE
Q 028214 105 IRNLEW----------RGHVDTVVMNPPFGTRKKGVDMDFLSMALKVASQAVY 147 (212)
Q Consensus 105 ~~~~~~----------~~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~~~~~ 147 (212)
+.+... .....++++-..+...........++.+.....+..+
T Consensus 176 L~d~~w~~~ll~~~~d~~~Ptl~iaEgvL~YL~~~~~~~ll~~ia~~~~~~~~ 228 (334)
T 1rjd_A 176 LNDITETTRLLDVCTKREIPTIVISECLLCYMHNNESQLLINTIMSKFSHGLW 228 (334)
T ss_dssp TTCHHHHHHHHHTTCCTTSCEEEEEESCGGGSCHHHHHHHHHHHHHHCSSEEE
T ss_pred CCCcHHHHHHHHhcCCCCCCEEEEEcchhhCCCHHHHHHHHHHHHhhCCCcEE
Confidence 886321 1256788887777666666666677766654444433
No 331
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=91.62 E-value=1.1 Score=34.83 Aligned_cols=77 Identities=19% Similarity=0.293 Sum_probs=53.2
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++. +++..+.....+...+.++.+++.|+.+...-
T Consensus 26 ~~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 104 (280)
T 4da9_A 26 QKARPVAIVTGGRRGIGLGIARALAASGF-DIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAE 104 (280)
T ss_dssp CCCCCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHH
T ss_pred ccCCCEEEEecCCCHHHHHHHHHHHHCCC-eEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3467888988876654 3444445555 8999995 77777666666666566789999999876431
Q ss_pred -CcccEEEEcCCC
Q 028214 112 -GHVDTVVMNPPF 123 (212)
Q Consensus 112 -~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 105 ~g~iD~lvnnAg~ 117 (280)
T 4da9_A 105 FGRIDCLVNNAGI 117 (280)
T ss_dssp HSCCCEEEEECC-
T ss_pred cCCCCEEEECCCc
Confidence 168999988755
No 332
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=91.61 E-value=0.71 Score=35.33 Aligned_cols=78 Identities=18% Similarity=0.081 Sum_probs=56.1
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------Cc
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------~~ 113 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++...+.+...++..+.++.++..|+.+...- ..
T Consensus 5 ~~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~ 83 (252)
T 3h7a_A 5 PRNATVAVIGAGDYIGAEIAKKFAAEGF-TVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAP 83 (252)
T ss_dssp CCSCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCC
Confidence 367888988877664 3444445555 899999998888777777766666789999998765321 15
Q ss_pred ccEEEEcCCCCC
Q 028214 114 VDTVVMNPPFGT 125 (212)
Q Consensus 114 ~D~i~~nppy~~ 125 (212)
.|+++.|.-...
T Consensus 84 id~lv~nAg~~~ 95 (252)
T 3h7a_A 84 LEVTIFNVGANV 95 (252)
T ss_dssp EEEEEECCCCCC
T ss_pred ceEEEECCCcCC
Confidence 799998876543
No 333
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=91.49 E-value=1.1 Score=35.19 Aligned_cols=79 Identities=25% Similarity=0.333 Sum_probs=57.5
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++.++..++.+.+.+...+.++.++..|+.+...-
T Consensus 28 ~l~gk~vlVTGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 106 (301)
T 3tjr_A 28 GFDGRAAVVTGGASGIGLATATEFARRGA-RLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLL 106 (301)
T ss_dssp CSTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhC
Confidence 3577899988877653 3444445555 899999999888888777776666889999998875321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-+..
T Consensus 107 g~id~lvnnAg~~~ 120 (301)
T 3tjr_A 107 GGVDVVFSNAGIVV 120 (301)
T ss_dssp SSCSEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 15899998876543
No 334
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=91.41 E-value=0.87 Score=31.43 Aligned_cols=67 Identities=16% Similarity=0.206 Sum_probs=43.3
Q ss_pred CCEEEEEcCCc-ChH-HHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC---C--CcccEEEEcC
Q 028214 49 NKVVADFGCGC-GTL-GAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW---R--GHVDTVVMNP 121 (212)
Q Consensus 49 ~~~vlDlg~G~-G~~-~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~---~--~~~D~i~~np 121 (212)
..+++=+|+|. |.. ...+...|. .|+++|.+++.++.+++. .+.++.+|..+... . ..+|+++.-.
T Consensus 7 ~~~viIiG~G~~G~~la~~L~~~g~-~v~vid~~~~~~~~~~~~------g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (140)
T 3fwz_A 7 CNHALLVGYGRVGSLLGEKLLASDI-PLVVIETSRTRVDELRER------GVRAVLGNAANEEIMQLAHLECAKWLILTI 79 (140)
T ss_dssp CSCEEEECCSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHT------TCEEEESCTTSHHHHHHTTGGGCSEEEECC
T ss_pred CCCEEEECcCHHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHHc------CCCEEECCCCCHHHHHhcCcccCCEEEEEC
Confidence 34688888764 322 223333344 899999999988877642 46788898765421 1 2789888754
Q ss_pred C
Q 028214 122 P 122 (212)
Q Consensus 122 p 122 (212)
|
T Consensus 80 ~ 80 (140)
T 3fwz_A 80 P 80 (140)
T ss_dssp S
T ss_pred C
Confidence 4
No 335
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=91.25 E-value=1.3 Score=33.63 Aligned_cols=76 Identities=26% Similarity=0.278 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- .
T Consensus 7 ~~~k~vlITGas~giG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 85 (253)
T 3qiv_A 7 FENKVGIVTGSGGGIGQAYAEALAREGA-AVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFG 85 (253)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 367889988866553 3444444455 899999999888887777766665788999998875321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 86 ~id~li~~Ag~ 96 (253)
T 3qiv_A 86 GIDYLVNNAAI 96 (253)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCc
Confidence 68999988754
No 336
>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}
Probab=91.23 E-value=0.85 Score=35.17 Aligned_cols=78 Identities=21% Similarity=0.264 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+.. .+.++.+++.|+.+...-
T Consensus 18 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 96 (266)
T 4egf_A 18 LDGKRALITGATKGIGADIARAFAAAGA-RLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF 96 (266)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 467888888866553 3344444455 899999998887776665544 455789999999876431
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 97 g~id~lv~nAg~~~ 110 (266)
T 4egf_A 97 GGLDVLVNNAGISH 110 (266)
T ss_dssp TSCSEEEEECCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 16899998876543
No 337
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=91.04 E-value=1.1 Score=34.21 Aligned_cols=78 Identities=19% Similarity=0.306 Sum_probs=55.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+...+.+...+.++.++..|+.+...- .
T Consensus 10 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 88 (256)
T 3gaf_A 10 LNDAVAIVTGAAAGIGRAIAGTFAKAGA-SVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFG 88 (256)
T ss_dssp CTTCEEEECSCSSHHHHHHHHHHHHHTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467888888866654 3344444565 899999998888777777766666788999998875321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 89 ~id~lv~nAg~~~ 101 (256)
T 3gaf_A 89 KITVLVNNAGGGG 101 (256)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998876543
No 338
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=91.00 E-value=2.8 Score=32.13 Aligned_cols=78 Identities=21% Similarity=0.152 Sum_probs=54.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhh-cCC-ceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAAD-LEL-DIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~-~v~~~~~d~~~~~~~---------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+.. .+. ++.++..|+.+...-
T Consensus 6 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~ 84 (265)
T 3lf2_A 6 LSEAVAVVTGGSSGIGLATVELLLEAGA-AVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERT 84 (265)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 467889988877664 3444445555 899999998888777666654 333 588999998875321
Q ss_pred -CcccEEEEcCCCCC
Q 028214 112 -GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 -~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 85 ~g~id~lvnnAg~~~ 99 (265)
T 3lf2_A 85 LGCASILVNNAGQGR 99 (265)
T ss_dssp HCSCSEEEECCCCCC
T ss_pred cCCCCEEEECCCCCC
Confidence 16799998876643
No 339
>2uyo_A Hypothetical protein ML2640; putative methyltransferase, transferas; 1.7A {Mycobacterium leprae} SCOP: c.66.1.57 PDB: 2ckd_A 2uyq_A*
Probab=90.94 E-value=1.7 Score=34.71 Aligned_cols=92 Identities=13% Similarity=0.098 Sum_probs=61.8
Q ss_pred CCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC----CceEEEEcccccCcCC----------Ccc
Q 028214 49 NKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLE----LDIDFVQCDIRNLEWR----------GHV 114 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~----~~v~~~~~d~~~~~~~----------~~~ 114 (212)
...|+++|||-=....-+..-....++=+| .|..++..++.+...+ .+..++..|+.+ ... ...
T Consensus 103 ~~QvV~LGaGlDTra~Rl~~~~~~~v~evD-~P~vi~~k~~lL~~~~~~~~~~~~~v~~Dl~d-~~~~~l~~~g~d~~~P 180 (310)
T 2uyo_A 103 IRQFVILASGLDSRAYRLDWPTGTTVYEID-QPKVLAYKSTTLAEHGVTPTADRREVPIDLRQ-DWPPALRSAGFDPSAR 180 (310)
T ss_dssp CCEEEEETCTTCCHHHHSCCCTTCEEEEEE-CHHHHHHHHHHHHHTTCCCSSEEEEEECCTTS-CHHHHHHHTTCCTTSC
T ss_pred CCeEEEeCCCCCchhhhccCCCCcEEEEcC-CHHHHHHHHHHHHhcCCCCCCCeEEEecchHh-hHHHHHHhccCCCCCC
Confidence 467999999988774444321135888888 5999999888887533 267889999886 211 133
Q ss_pred cEEEEcCCCCCCCCCchHHHHHHHHhhc
Q 028214 115 DTVVMNPPFGTRKKGVDMDFLSMALKVA 142 (212)
Q Consensus 115 D~i~~nppy~~~~~~~~~~~l~~~~~~~ 142 (212)
-++++-..++..........++.+....
T Consensus 181 t~~i~Egvl~Yl~~~~~~~ll~~l~~~~ 208 (310)
T 2uyo_A 181 TAWLAEGLLMYLPATAQDGLFTEIGGLS 208 (310)
T ss_dssp EEEEECSCGGGSCHHHHHHHHHHHHHTC
T ss_pred EEEEEechHhhCCHHHHHHHHHHHHHhC
Confidence 4677777766665555566777766554
No 340
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=90.71 E-value=1 Score=34.48 Aligned_cols=76 Identities=26% Similarity=0.277 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++...+.+...++..+.++.++..|+.+...- .
T Consensus 4 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 82 (257)
T 3imf_A 4 MKEKVVIITGGSSGMGKGMATRFAKEGA-RVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFG 82 (257)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 467788888865553 3334444455 899999999888887777765555788999998874321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 83 ~id~lv~nAg~ 93 (257)
T 3imf_A 83 RIDILINNAAG 93 (257)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999988754
No 341
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=90.58 E-value=3.3 Score=31.95 Aligned_cols=79 Identities=19% Similarity=0.156 Sum_probs=53.0
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccCcC
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEW 110 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (212)
...++++|-.|++.|+ +...+++.|. +|+.+|.+ ...++.....+...+.++.++..|+.+...
T Consensus 7 ~l~~k~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 85 (281)
T 3s55_A 7 DFEGKTALITGGARGMGRSHAVALAEAGA-DIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAA 85 (281)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHH
Confidence 3477899998876653 3344444555 89999986 555555555555555578899999887532
Q ss_pred C-----------CcccEEEEcCCCCC
Q 028214 111 R-----------GHVDTVVMNPPFGT 125 (212)
Q Consensus 111 ~-----------~~~D~i~~nppy~~ 125 (212)
- ...|+++.|.-...
T Consensus 86 v~~~~~~~~~~~g~id~lv~nAg~~~ 111 (281)
T 3s55_A 86 LESFVAEAEDTLGGIDIAITNAGIST 111 (281)
T ss_dssp HHHHHHHHHHHHTCCCEEEECCCCCC
T ss_pred HHHHHHHHHHhcCCCCEEEECCCCCC
Confidence 1 16899998876543
No 342
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=90.31 E-value=1.9 Score=33.85 Aligned_cols=78 Identities=28% Similarity=0.351 Sum_probs=54.2
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccCcC
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEW 110 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (212)
...++++|-.|++.|+ +...+++.|. +|+.+|.+ ++.++.+...+...+.++.++..|+.+...
T Consensus 25 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~ 103 (299)
T 3t7c_A 25 KVEGKVAFITGAARGQGRSHAITLAREGA-DIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDA 103 (299)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHH
Confidence 3578899999977664 3444455555 89999987 566666666666656678999999987532
Q ss_pred C-----------CcccEEEEcCCCC
Q 028214 111 R-----------GHVDTVVMNPPFG 124 (212)
Q Consensus 111 ~-----------~~~D~i~~nppy~ 124 (212)
- ...|+++.|.-..
T Consensus 104 v~~~~~~~~~~~g~iD~lv~nAg~~ 128 (299)
T 3t7c_A 104 MQAAVDDGVTQLGRLDIVLANAALA 128 (299)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHhCCCCEEEECCCCC
Confidence 1 1689999887643
No 343
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=90.30 E-value=1.5 Score=33.14 Aligned_cols=77 Identities=19% Similarity=0.173 Sum_probs=54.4
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cc
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~ 113 (212)
.++++|-.|++.|. +...+++.|. +|+.++.++...+.....++..+.++.++..|+.+...- ..
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~-~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGA-TVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLA 82 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 56788888865543 3344444455 899999999888877777776666889999998764321 15
Q ss_pred ccEEEEcCCCCC
Q 028214 114 VDTVVMNPPFGT 125 (212)
Q Consensus 114 ~D~i~~nppy~~ 125 (212)
.|+++.|.-+..
T Consensus 83 id~li~~Ag~~~ 94 (247)
T 3lyl_A 83 IDILVNNAGITR 94 (247)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 799998876543
No 344
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=90.14 E-value=1.5 Score=33.50 Aligned_cols=75 Identities=25% Similarity=0.358 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.| ++..++ +.|. +|+.++.++...+...+.+...+.++.++..|+.+...-
T Consensus 27 l~~k~vlITGas~g-IG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 104 (262)
T 3rkr_A 27 LSGQVAVVTGASRG-IGAAIARKLGSLGA-RVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAH 104 (262)
T ss_dssp TTTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhc
Confidence 46788888886544 444444 4455 899999999888877777766666788999998765321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
.+.|+++.|.-.
T Consensus 105 g~id~lv~~Ag~ 116 (262)
T 3rkr_A 105 GRCDVLVNNAGV 116 (262)
T ss_dssp SCCSEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 158999988765
No 345
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=90.12 E-value=1.5 Score=34.02 Aligned_cols=77 Identities=16% Similarity=0.194 Sum_probs=53.8
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cc
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~ 113 (212)
.++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- ..
T Consensus 23 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 23 RPQTAFVTGVSSGIGLAVARTLAARGI-AVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp --CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56789988866553 3444445555 899999999888877777766666789999998865321 15
Q ss_pred ccEEEEcCCCCC
Q 028214 114 VDTVVMNPPFGT 125 (212)
Q Consensus 114 ~D~i~~nppy~~ 125 (212)
.|+++.|.-...
T Consensus 102 id~lv~nAg~~~ 113 (279)
T 3sju_A 102 IGILVNSAGRNG 113 (279)
T ss_dssp CCEEEECCCCCC
T ss_pred CcEEEECCCCCC
Confidence 799998876543
No 346
>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}
Probab=90.06 E-value=0.76 Score=37.77 Aligned_cols=45 Identities=36% Similarity=0.370 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |.+++.+++. |..+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 2dph_A 182 GVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLLSD 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHH
Confidence 445789999999875 6677777754 65589999999988887764
No 347
>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}
Probab=89.96 E-value=5.3 Score=30.56 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=47.9
Q ss_pred CEEEEEcCCcChHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEEcCCCCC
Q 028214 50 KVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVMNPPFGT 125 (212)
Q Consensus 50 ~~vlDlg~G~G~~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~nppy~~ 125 (212)
++||=.|| |.++..+++. ...+|++++-++........ . +++++.+|+.++. ...+|+|+.......
T Consensus 6 ~~ilVtGa--G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~----~--~~~~~~~D~~d~~-~~~~d~vi~~a~~~~ 75 (286)
T 3ius_A 6 GTLLSFGH--GYTARVLSRALAPQGWRIIGTSRNPDQMEAIRA----S--GAEPLLWPGEEPS-LDGVTHLLISTAPDS 75 (286)
T ss_dssp CEEEEETC--CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHHH----T--TEEEEESSSSCCC-CTTCCEEEECCCCBT
T ss_pred CcEEEECC--cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHhh----C--CCeEEEecccccc-cCCCCEEEECCCccc
Confidence 68999994 8887777643 13489999998765443322 2 5899999998866 448999997766543
No 348
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=89.82 E-value=1.5 Score=33.85 Aligned_cols=76 Identities=17% Similarity=0.154 Sum_probs=53.6
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cc
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~ 113 (212)
.++++|-.|++.|+ +...+++.|. +|+.++.++..++.+.+.+...+.++.++..|+.+...- ..
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 81 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGA-KILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGR 81 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46778888866553 3334444555 899999999888887777766666788899998764321 16
Q ss_pred ccEEEEcCCCC
Q 028214 114 VDTVVMNPPFG 124 (212)
Q Consensus 114 ~D~i~~nppy~ 124 (212)
.|+++.|.-..
T Consensus 82 iD~lVnnAG~~ 92 (264)
T 3tfo_A 82 IDVLVNNAGVM 92 (264)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 89999887654
No 349
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=89.76 E-value=1.3 Score=34.45 Aligned_cols=79 Identities=25% Similarity=0.308 Sum_probs=56.1
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++.++...+...+.+...+.++.+++.|+.+...-
T Consensus 29 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 107 (276)
T 3r1i_A 29 DLSGKRALITGASTGIGKKVALAYAEAGA-QVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGEL 107 (276)
T ss_dssp CCTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 3578899988876554 3444445555 899999998887777777666665788899998865321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 108 g~iD~lvnnAg~~~ 121 (276)
T 3r1i_A 108 GGIDIAVCNAGIVS 121 (276)
T ss_dssp SCCSEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 16899998876543
No 350
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=89.74 E-value=1.7 Score=33.78 Aligned_cols=76 Identities=21% Similarity=0.198 Sum_probs=54.1
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- .
T Consensus 26 ~~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (283)
T 3v8b_A 26 QPSPVALITGAGSGIGRATALALAADGV-TVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFG 104 (283)
T ss_dssp -CCCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 367888988876654 3344445555 899999998888777777666555788999998875321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 105 ~iD~lVnnAg~ 115 (283)
T 3v8b_A 105 HLDIVVANAGI 115 (283)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 68999988765
No 351
>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}
Probab=89.64 E-value=2.2 Score=32.64 Aligned_cols=78 Identities=31% Similarity=0.406 Sum_probs=55.5
Q ss_pred CCCCEEEEEcC-CcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC-CceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGC-GCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~-G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~v~~~~~d~~~~~~~---------- 111 (212)
.+++++|-.|+ |+|. +...+++.|. +|+.++.++...+.+.+.+...+ .++.++..|+.+...-
T Consensus 20 l~~k~vlITGasg~GIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (266)
T 3o38_A 20 LKGKVVLVTAAAGTGIGSTTARRALLEGA-DVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEK 98 (266)
T ss_dssp TTTCEEEESSCSSSSHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCCchHHHHHHHHHHCCC-EEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHH
Confidence 46788998887 5654 4455555555 89999999888777776665443 3789999999875321
Q ss_pred -CcccEEEEcCCCCC
Q 028214 112 -GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 -~~~D~i~~nppy~~ 125 (212)
.+.|+++.|.-...
T Consensus 99 ~g~id~li~~Ag~~~ 113 (266)
T 3o38_A 99 AGRLDVLVNNAGLGG 113 (266)
T ss_dssp HSCCCEEEECCCCCC
T ss_pred hCCCcEEEECCCcCC
Confidence 15799998877643
No 352
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=89.53 E-value=2.3 Score=32.91 Aligned_cols=77 Identities=26% Similarity=0.349 Sum_probs=53.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC----------------hHHHHHHHHHHhhcCCceEEEEccccc
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID----------------SDSLELASENAADLELDIDFVQCDIRN 107 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~----------------~~~~~~a~~~~~~~~~~v~~~~~d~~~ 107 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.+ ++.++.....+...+.++.++..|+.+
T Consensus 9 l~~k~~lVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~ 87 (286)
T 3uve_A 9 VEGKVAFVTGAARGQGRSHAVRLAQEGA-DIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRD 87 (286)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTC
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-eEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCC
Confidence 478899999977664 3444555555 89999987 566666555555555578899999886
Q ss_pred CcCC-----------CcccEEEEcCCCC
Q 028214 108 LEWR-----------GHVDTVVMNPPFG 124 (212)
Q Consensus 108 ~~~~-----------~~~D~i~~nppy~ 124 (212)
...- ...|+++.|.-..
T Consensus 88 ~~~v~~~~~~~~~~~g~id~lv~nAg~~ 115 (286)
T 3uve_A 88 YDALKAAVDSGVEQLGRLDIIVANAGIG 115 (286)
T ss_dssp HHHHHHHHHHHHHHHSCCCEEEECCCCC
T ss_pred HHHHHHHHHHHHHHhCCCCEEEECCccc
Confidence 4321 1689999887653
No 353
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=89.47 E-value=2.3 Score=32.77 Aligned_cols=79 Identities=27% Similarity=0.312 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccCcCC
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEWR 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~ 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.+ ++.++...+.+...+.++.++..|+.+...-
T Consensus 11 l~gk~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v 89 (278)
T 3sx2_A 11 LTGKVAFITGAARGQGRAHAVRLAADGA-DIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESL 89 (278)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHH
T ss_pred CCCCEEEEECCCChHHHHHHHHHHHCCC-eEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHH
Confidence 467889988866553 3444445555 89999987 6666666555555555789999998865321
Q ss_pred -----------CcccEEEEcCCCCCC
Q 028214 112 -----------GHVDTVVMNPPFGTR 126 (212)
Q Consensus 112 -----------~~~D~i~~nppy~~~ 126 (212)
...|+++.|.-....
T Consensus 90 ~~~~~~~~~~~g~id~lv~nAg~~~~ 115 (278)
T 3sx2_A 90 SAALQAGLDELGRLDIVVANAGIAPM 115 (278)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCCCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCCCCC
Confidence 168999988766443
No 354
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=89.46 E-value=2.4 Score=32.75 Aligned_cols=79 Identities=23% Similarity=0.228 Sum_probs=55.0
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-------------ChHHHHHHHHHHhhcCCceEEEEcccccCc
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-------------DSDSLELASENAADLELDIDFVQCDIRNLE 109 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-------------~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~ 109 (212)
...++++|-.|++.|+ +...+++.|. +|+.+|. ++..++.+.+.+...+.++.+++.|+.+..
T Consensus 12 ~l~gk~~lVTGas~gIG~a~a~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 90 (280)
T 3pgx_A 12 SLQGRVAFITGAARGQGRSHAVRLAAEGA-DIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDA 90 (280)
T ss_dssp TTTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred ccCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHH
Confidence 3578899988877664 3444445555 8999997 667777666666666667889999987643
Q ss_pred CC-----------CcccEEEEcCCCCC
Q 028214 110 WR-----------GHVDTVVMNPPFGT 125 (212)
Q Consensus 110 ~~-----------~~~D~i~~nppy~~ 125 (212)
.- .+.|+++.|.-...
T Consensus 91 ~v~~~~~~~~~~~g~id~lvnnAg~~~ 117 (280)
T 3pgx_A 91 ALRELVADGMEQFGRLDVVVANAGVLS 117 (280)
T ss_dssp HHHHHHHHHHHHHCCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 21 16899998876543
No 355
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=89.38 E-value=2.2 Score=33.00 Aligned_cols=76 Identities=24% Similarity=0.275 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcCC---------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~--------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.++...+.+.+.++..+. ++.+++.|+.+...-
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 87 (281)
T 3svt_A 9 FQDRTYLVTGGGSGIGKGVAAGLVAAGA-SVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTA 87 (281)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHH
Confidence 467889988866553 3344444555 899999999888777777765544 688899998875321
Q ss_pred --CcccEEEEcCCC
Q 028214 112 --GHVDTVVMNPPF 123 (212)
Q Consensus 112 --~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 88 ~~g~id~lv~nAg~ 101 (281)
T 3svt_A 88 WHGRLHGVVHCAGG 101 (281)
T ss_dssp HHSCCCEEEECCCC
T ss_pred HcCCCCEEEECCCc
Confidence 157999988764
No 356
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=89.37 E-value=2.1 Score=32.78 Aligned_cols=78 Identities=19% Similarity=0.222 Sum_probs=56.3
Q ss_pred CCCCCEEEEEcCCc--Ch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC--------
Q 028214 46 DVSNKVVADFGCGC--GT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR-------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~--G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~-------- 111 (212)
.++++++|--|+++ |+ ++..+++.|. +|+.++.++...+.+.+.++..+- ++.+++.|+.+...-
T Consensus 3 ~l~gK~alVTGaa~~~GIG~aiA~~la~~Ga-~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (256)
T 4fs3_A 3 NLENKTYVIMGIANKRSIAFGVAKVLDQLGA-KLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIG 81 (256)
T ss_dssp CCTTCEEEEECCCSTTCHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCCchHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHH
Confidence 35889999999643 43 4555556666 899999998888877777766543 788899998764321
Q ss_pred ---CcccEEEEcCCCC
Q 028214 112 ---GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ---~~~D~i~~nppy~ 124 (212)
.+.|+++.|..+.
T Consensus 82 ~~~G~iD~lvnnAg~~ 97 (256)
T 4fs3_A 82 KDVGNIDGVYHSIAFA 97 (256)
T ss_dssp HHHCCCSEEEECCCCC
T ss_pred HHhCCCCEEEeccccc
Confidence 1789999886653
No 357
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=89.19 E-value=2.6 Score=31.90 Aligned_cols=77 Identities=18% Similarity=0.199 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- .
T Consensus 5 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g 83 (247)
T 2jah_A 5 LQGKVALITGASSGIGEATARALAAEGA-AVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALG 83 (247)
T ss_dssp TTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 357788888866553 2333444455 899999998877766666655455788899998764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 84 ~id~lv~nAg~~ 95 (247)
T 2jah_A 84 GLDILVNNAGIM 95 (247)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 589999886543
No 358
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=89.03 E-value=2.6 Score=32.38 Aligned_cols=77 Identities=23% Similarity=0.281 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++ |.++..++ +.|. +|++++.++...+...+.++..+.++.++..|+.+...-
T Consensus 29 l~~k~vlITGas-ggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 106 (272)
T 1yb1_A 29 VTGEIVLITGAG-HGIGRLTAYEFAKLKS-KLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEI 106 (272)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred cCCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHC
Confidence 467888888855 55554444 4454 899999998877766666655555788999998764311
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 107 g~iD~li~~Ag~~~ 120 (272)
T 1yb1_A 107 GDVSILVNNAGVVY 120 (272)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCCcEEEECCCcCC
Confidence 15899998876543
No 359
>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}
Probab=89.02 E-value=1.3 Score=35.90 Aligned_cols=67 Identities=21% Similarity=0.212 Sum_probs=42.3
Q ss_pred CCCEEEEEcCCcChHHHHHHHc--CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----CcccEEEEcC
Q 028214 48 SNKVVADFGCGCGTLGAAATLL--GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----GHVDTVVMNP 121 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~--~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----~~~D~i~~np 121 (212)
+.++|+=+|| |.++..+++. ....|+..|.+...++.++.. ++.+..|+.+...- .+.|+|++-.
T Consensus 15 ~~mkilvlGa--G~vG~~~~~~L~~~~~v~~~~~~~~~~~~~~~~-------~~~~~~d~~d~~~l~~~~~~~DvVi~~~ 85 (365)
T 3abi_A 15 RHMKVLILGA--GNIGRAIAWDLKDEFDVYIGDVNNENLEKVKEF-------ATPLKVDASNFDKLVEVMKEFELVIGAL 85 (365)
T ss_dssp -CCEEEEECC--SHHHHHHHHHHTTTSEEEEEESCHHHHHHHTTT-------SEEEECCTTCHHHHHHHHTTCSEEEECC
T ss_pred CccEEEEECC--CHHHHHHHHHHhcCCCeEEEEcCHHHHHHHhcc-------CCcEEEecCCHHHHHHHHhCCCEEEEec
Confidence 4568999998 5555555432 234799999998877766433 45566676553211 1789988654
Q ss_pred CC
Q 028214 122 PF 123 (212)
Q Consensus 122 py 123 (212)
|+
T Consensus 86 p~ 87 (365)
T 3abi_A 86 PG 87 (365)
T ss_dssp CG
T ss_pred CC
Confidence 43
No 360
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=88.94 E-value=1.7 Score=33.57 Aligned_cols=77 Identities=16% Similarity=0.126 Sum_probs=54.0
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.....+...+.++.++..|+.+...- .
T Consensus 26 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 104 (270)
T 3ftp_A 26 LDKQVAIVTGASRGIGRAIALELARRGA-MVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFG 104 (270)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 467788877765553 3334444555 899999998888777777766666788889998764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 105 ~iD~lvnnAg~~ 116 (270)
T 3ftp_A 105 ALNVLVNNAGIT 116 (270)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 589999887654
No 361
>1eg2_A Modification methylase RSRI; rossmann fold, exocyclic amino DNA methyltransferase RSRI, D binding, DNA modification, DNA methylation; HET: MTA; 1.75A {Rhodobacter sphaeroides} SCOP: c.66.1.11 PDB: 1nw5_A* 1nw6_A* 1nw7_A* 1nw8_A
Probab=88.91 E-value=0.39 Score=38.53 Aligned_cols=30 Identities=17% Similarity=0.350 Sum_probs=22.7
Q ss_pred ceEEE-EcccccCcC---CCcccEEEEcCCCCCC
Q 028214 97 DIDFV-QCDIRNLEW---RGHVDTVVMNPPFGTR 126 (212)
Q Consensus 97 ~v~~~-~~d~~~~~~---~~~~D~i~~nppy~~~ 126 (212)
...++ ++|+.+... ..++|+|++||||...
T Consensus 38 ~~~l~i~gD~l~~L~~l~~~svDlI~tDPPY~~~ 71 (319)
T 1eg2_A 38 TRHVYDVCDCLDTLAKLPDDSVQLIICDPPYNIM 71 (319)
T ss_dssp EEEEEEECCHHHHHHTSCTTCEEEEEECCCSBCC
T ss_pred cceEEECCcHHHHHHhCccCCcCEEEECCCCCCC
Confidence 35677 999876432 2389999999999754
No 362
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=88.89 E-value=1.1 Score=34.69 Aligned_cols=78 Identities=15% Similarity=0.134 Sum_probs=54.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------Cc
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------~~ 113 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- ..
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~ 109 (275)
T 4imr_A 31 LRGRTALVTGSSRGIGAAIAEGLAGAGA-HVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAP 109 (275)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSC
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 367888888866553 3344444555 899999998777777666666566788999999875321 15
Q ss_pred ccEEEEcCCCCC
Q 028214 114 VDTVVMNPPFGT 125 (212)
Q Consensus 114 ~D~i~~nppy~~ 125 (212)
.|+++.|.-...
T Consensus 110 iD~lvnnAg~~~ 121 (275)
T 4imr_A 110 VDILVINASAQI 121 (275)
T ss_dssp CCEEEECCCCCC
T ss_pred CCEEEECCCCCC
Confidence 799998876543
No 363
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=88.77 E-value=2.9 Score=33.16 Aligned_cols=77 Identities=22% Similarity=0.165 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~---------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|++++.++...+.+.+.+...+. ++.++..|+.+...-
T Consensus 6 l~~k~vlVTGas~gIG~~la~~l~~~G~-~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 84 (319)
T 3ioy_A 6 FAGRTAFVTGGANGVGIGLVRQLLNQGC-KVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEAR 84 (319)
T ss_dssp CTTCEEEEETTTSTHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEcCCchHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHh
Confidence 467889988877664 3444444555 899999999888777776665554 688999998874321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 85 ~g~id~lv~nAg~~ 98 (319)
T 3ioy_A 85 FGPVSILCNNAGVN 98 (319)
T ss_dssp TCCEEEEEECCCCC
T ss_pred CCCCCEEEECCCcC
Confidence 1579999887654
No 364
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=88.74 E-value=1.4 Score=28.81 Aligned_cols=69 Identities=20% Similarity=0.257 Sum_probs=45.1
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC----CCcccEEEE
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW----RGHVDTVVM 119 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~----~~~~D~i~~ 119 (212)
..++++-+|+ |.++..++ ..|..+|+++|.++...+.+. .. .+.+...|..+... -..+|+|+.
T Consensus 4 ~~~~v~I~G~--G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~----~~--~~~~~~~d~~~~~~~~~~~~~~d~vi~ 75 (118)
T 3ic5_A 4 MRWNICVVGA--GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN----RM--GVATKQVDAKDEAGLAKALGGFDAVIS 75 (118)
T ss_dssp TCEEEEEECC--SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH----TT--TCEEEECCTTCHHHHHHHTTTCSEEEE
T ss_pred CcCeEEEECC--CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH----hC--CCcEEEecCCCHHHHHHHHcCCCEEEE
Confidence 3468888887 55555444 345358999999987776554 12 46677777765321 126899998
Q ss_pred cCCCC
Q 028214 120 NPPFG 124 (212)
Q Consensus 120 nppy~ 124 (212)
..|+.
T Consensus 76 ~~~~~ 80 (118)
T 3ic5_A 76 AAPFF 80 (118)
T ss_dssp CSCGG
T ss_pred CCCch
Confidence 87753
No 365
>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}
Probab=88.73 E-value=2.9 Score=31.62 Aligned_cols=76 Identities=29% Similarity=0.302 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++ |.++..++ +.|. +|+.++.++...+...+.++..+.++.++..|+.+...-
T Consensus 11 l~~k~vlItGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (260)
T 3awd_A 11 LDNRVAIVTGGA-QNIGLACVTALAEAGA-RVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQE 88 (260)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 357788888854 55554444 3454 899999998776666555555455788999998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 89 ~~id~vi~~Ag~~ 101 (260)
T 3awd_A 89 GRVDILVACAGIC 101 (260)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1579999876543
No 366
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=88.73 E-value=2.9 Score=31.96 Aligned_cols=76 Identities=20% Similarity=0.308 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...- .
T Consensus 5 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 83 (262)
T 1zem_A 5 FNGKVCLVTGAGGNIGLATALRLAEEGT-AIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFG 83 (262)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 367888888866553 2333444455 899999998877766666655455788899998765321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 84 ~id~lv~nAg~ 94 (262)
T 1zem_A 84 KIDFLFNNAGY 94 (262)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999988654
No 367
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=88.66 E-value=2.8 Score=31.91 Aligned_cols=76 Identities=18% Similarity=0.236 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...-
T Consensus 7 l~~k~vlVTGas~g-iG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (260)
T 2ae2_A 7 LEGCTALVTGGSRG-IGYGIVEELASLGA-SVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHF 84 (260)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 35778888886544 44444 44455 899999998877666555555455788899998764210
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 85 ~g~id~lv~~Ag~~ 98 (260)
T 2ae2_A 85 HGKLNILVNNAGIV 98 (260)
T ss_dssp TTCCCEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 2589999887643
No 368
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=88.65 E-value=3.6 Score=31.88 Aligned_cols=75 Identities=24% Similarity=0.321 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.++...+.+.+.+ +.++.++..|+.+...- .
T Consensus 27 l~gk~vlVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (277)
T 3gvc_A 27 LAGKVAIVTGAGAGIGLAVARRLADEGC-HVLCADIDGDAADAAATKI---GCGAAACRVDVSDEQQIIAMVDACVAAFG 102 (277)
T ss_dssp CTTCEEEETTTTSTHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CSSCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCcceEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467888888876664 3444455555 8999999987776655544 33688899998875321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 103 ~iD~lvnnAg~~~ 115 (277)
T 3gvc_A 103 GVDKLVANAGVVH 115 (277)
T ss_dssp SCCEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998876543
No 369
>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}
Probab=88.58 E-value=1.1 Score=34.69 Aligned_cols=77 Identities=16% Similarity=0.203 Sum_probs=54.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.++..+.++.++..|+.+...- .
T Consensus 24 l~gk~~lVTGas~gIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 102 (271)
T 4ibo_A 24 LGGRTALVTGSSRGLGRAMAEGLAVAGA-RILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGI 102 (271)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTC
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 477888888866553 3344444555 899999998888877777766666788999998865321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 103 ~iD~lv~nAg~~ 114 (271)
T 4ibo_A 103 DVDILVNNAGIQ 114 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 589999887654
No 370
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=88.49 E-value=2.3 Score=32.64 Aligned_cols=70 Identities=21% Similarity=0.199 Sum_probs=48.0
Q ss_pred CEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cccc
Q 028214 50 KVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GHVD 115 (212)
Q Consensus 50 ~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~~D 115 (212)
+++|--|+++|+ +...+++.|. +|+.+|.+++..+...+. +.++..++.|+.+...- .+.|
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga-~V~~~~~~~~~~~~~~~~----~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iD 77 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGD-KVCFIDIDEKRSADFAKE----RPNLFYFHGDVADPLTLKKFVEYAMEKLQRID 77 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTT----CTTEEEEECCTTSHHHHHHHHHHHHHHHSCCC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHh----cCCEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 678888877775 3455555565 899999998766544332 22678889998864321 1789
Q ss_pred EEEEcCCCC
Q 028214 116 TVVMNPPFG 124 (212)
Q Consensus 116 ~i~~nppy~ 124 (212)
+++.|--..
T Consensus 78 iLVNNAG~~ 86 (247)
T 3ged_A 78 VLVNNACRG 86 (247)
T ss_dssp EEEECCCCC
T ss_pred EEEECCCCC
Confidence 999887543
No 371
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=88.47 E-value=3.1 Score=32.05 Aligned_cols=77 Identities=19% Similarity=0.212 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC------------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------------ 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~------------ 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...-
T Consensus 19 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 97 (273)
T 1ae1_A 19 LKGTTALVTGGSKGIGYAIVEELAGLGA-RVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFD 97 (273)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTT
T ss_pred CCCCEEEEECCcchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 367888888865543 2333344455 899999998877666555555455788899998764311
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 98 g~id~lv~nAg~~ 110 (273)
T 1ae1_A 98 GKLNILVNNAGVV 110 (273)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCcEEEECCCCC
Confidence 2579999887553
No 372
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=88.41 E-value=3 Score=32.21 Aligned_cols=76 Identities=21% Similarity=0.269 Sum_probs=51.6
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.++..+.++.++..|+.+...-
T Consensus 20 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 97 (277)
T 2rhc_B 20 QDSEVALVTGATSG-IGLEIARRLGKEGL-RVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY 97 (277)
T ss_dssp TTSCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh
Confidence 35678888886554 44443 34455 899999998877766666655455788899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 98 g~iD~lv~~Ag~~ 110 (277)
T 2rhc_B 98 GPVDVLVNNAGRP 110 (277)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1589999887543
No 373
>3vyw_A MNMC2; tRNA wobble uridine, modification enzyme, genetic CODE, 5- methylaminomethyl-2-thiouridine, methyltransferase; HET: SAM; 2.49A {Aquifex aeolicus} PDB: 2e58_A*
Probab=88.22 E-value=4.3 Score=32.34 Aligned_cols=105 Identities=19% Similarity=0.199 Sum_probs=57.1
Q ss_pred CCEEEEEcCCcChHHHHHH----HcC-CC--eEEEEeCCh--------H-HHHHHHHHHhhc----C--CceEEEEcccc
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLG-AD--QVIAIDIDS--------D-SLELASENAADL----E--LDIDFVQCDIR 106 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~-~~--~v~~~D~~~--------~-~~~~a~~~~~~~----~--~~v~~~~~d~~ 106 (212)
.-+|+|+|=|+|.-.+... +.+ .. +.+++|.++ . .-+......... + +..+++.+|+.
T Consensus 97 ~~~IlE~GFGTGLNfl~t~~~~~~~~~~~~L~~iS~Ek~pl~~~~~~~~~~~~l~~~l~~~~p~~~~~~v~L~l~~GDa~ 176 (308)
T 3vyw_A 97 VIRILDVGFGLGYNLAVALKHLWEVNPKLRVEIISFEKELLKEFPILPEPYREIHEFLLERVPEYEGERLSLKVLLGDAR 176 (308)
T ss_dssp EEEEEEECCTTSHHHHHHHHHHHHHCTTCEEEEEEEESSCCSCCCCCCTTSHHHHHHHHHHCSEEECSSEEEEEEESCHH
T ss_pred CcEEEEeCCCccHHHHHHHHHHHHhCCCcceEEEeecHHHHHhhHhchHhHHHHHHHHHHhCccccCCcEEEEEEechHH
Confidence 3589999999997433222 222 22 456777532 1 112222222211 1 15678999987
Q ss_pred cCcCC--C-cccEEEEcCCCCCCCCC--chHHHHHHHHhhcC-ceEEEEecCch
Q 028214 107 NLEWR--G-HVDTVVMNPPFGTRKKG--VDMDFLSMALKVAS-QAVYSLHKTST 154 (212)
Q Consensus 107 ~~~~~--~-~~D~i~~nppy~~~~~~--~~~~~l~~~~~~~~-~~~~~~~~~~~ 154 (212)
+.... . ++|+++.|+ |.+.... =...+++...+..+ ++.+.++...+
T Consensus 177 ~~l~~l~~~~~Da~flDg-FsP~kNPeLWs~e~f~~l~~~~~pgg~laTYtaag 229 (308)
T 3vyw_A 177 KRIKEVENFKADAVFHDA-FSPYKNPELWTLDFLSLIKERIDEKGYWVSYSSSL 229 (308)
T ss_dssp HHGGGCCSCCEEEEEECC-SCTTTSGGGGSHHHHHHHHTTEEEEEEEEESCCCH
T ss_pred HHHhhhcccceeEEEeCC-CCcccCcccCCHHHHHHHHHHhCCCcEEEEEeCcH
Confidence 75432 2 799999997 4443211 12356777766654 45555554443
No 374
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=88.21 E-value=2.3 Score=34.07 Aligned_cols=67 Identities=13% Similarity=0.148 Sum_probs=43.5
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEE
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVM 119 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~ 119 (212)
...++++||-.|+|. |...+.+++....+|++++.+++..+.+++ .|... ++ .+...+.. .+|+|+-
T Consensus 173 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~----lGa~~-v~-~~~~~~~~--~~D~vid 240 (348)
T 3two_A 173 KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS----MGVKH-FY-TDPKQCKE--ELDFIIS 240 (348)
T ss_dssp TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHHHH----TTCSE-EE-SSGGGCCS--CEEEEEE
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHh----cCCCe-ec-CCHHHHhc--CCCEEEE
Confidence 456789999999864 556666665433489999999988887765 33322 22 33332222 6888884
No 375
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=88.15 E-value=2.4 Score=32.51 Aligned_cols=77 Identities=18% Similarity=0.174 Sum_probs=53.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC-CceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.++..+ .++.+++.|+.+...-
T Consensus 8 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 86 (262)
T 3pk0_A 8 LQGRSVVVTGGTKGIGRGIATVFARAGA-NVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEF 86 (262)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 467888888865553 3334444455 89999999988877777666555 3788999998875321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 87 g~id~lvnnAg~~ 99 (262)
T 3pk0_A 87 GGIDVVCANAGVF 99 (262)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1689999887654
No 376
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=88.13 E-value=1.2 Score=34.64 Aligned_cols=76 Identities=17% Similarity=0.182 Sum_probs=53.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++..++.+...+...+.++.++..|+.+...- .
T Consensus 6 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (280)
T 3tox_A 6 LEGKIAIVTGASSGIGRAAALLFAREGA-KVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFG 84 (280)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467888888876553 3444445555 899999998888777776665555788899998864321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 85 ~iD~lvnnAg~ 95 (280)
T 3tox_A 85 GLDTAFNNAGA 95 (280)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 58999988764
No 377
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=87.97 E-value=2.5 Score=32.26 Aligned_cols=72 Identities=25% Similarity=0.317 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC------------C
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW------------R 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~------------~ 111 (212)
.++++|-.|++.| ++..++ +.|. +|+.++.++...+.+.+.+...+.++.++..|+.+... .
T Consensus 4 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~ 81 (260)
T 2qq5_A 4 NGQVCVVTGASRG-IGRGIALQLCKAGA-TVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQ 81 (260)
T ss_dssp TTCEEEESSTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEeCCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 5677887775544 444444 4455 89999999887766665555444468889999876431 1
Q ss_pred CcccEEEEcC
Q 028214 112 GHVDTVVMNP 121 (212)
Q Consensus 112 ~~~D~i~~np 121 (212)
...|+++.|.
T Consensus 82 g~id~lvnnA 91 (260)
T 2qq5_A 82 GRLDVLVNNA 91 (260)
T ss_dssp TCCCEEEECC
T ss_pred CCceEEEECC
Confidence 2569999887
No 378
>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}
Probab=87.93 E-value=1.6 Score=33.64 Aligned_cols=78 Identities=14% Similarity=0.093 Sum_probs=51.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC--CceEEEEcccccCcCC-------Ccc
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLE--LDIDFVQCDIRNLEWR-------GHV 114 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~--~~v~~~~~d~~~~~~~-------~~~ 114 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+ ..+.++..|+.+...- ...
T Consensus 8 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~i 86 (267)
T 3t4x_A 8 LKGKTALVTGSTAGIGKAIATSLVAEGA-NVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKV 86 (267)
T ss_dssp CTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCC
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCC
Confidence 467888888866553 3334444455 89999999887776666555442 2677888888764211 168
Q ss_pred cEEEEcCCCCC
Q 028214 115 DTVVMNPPFGT 125 (212)
Q Consensus 115 D~i~~nppy~~ 125 (212)
|+++.|.-...
T Consensus 87 d~lv~nAg~~~ 97 (267)
T 3t4x_A 87 DILINNLGIFE 97 (267)
T ss_dssp SEEEECCCCCC
T ss_pred CEEEECCCCCC
Confidence 99998876543
No 379
>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1
Probab=87.78 E-value=1.5 Score=35.85 Aligned_cols=45 Identities=33% Similarity=0.336 Sum_probs=34.7
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |.+++.+++. |..+|+++|.+++.++.+++
T Consensus 182 ~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a~~ 228 (398)
T 1kol_A 182 GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHAKA 228 (398)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHH
Confidence 445788999999764 6667777754 56589999999998888865
No 380
>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1
Probab=87.67 E-value=1.2 Score=36.11 Aligned_cols=46 Identities=30% Similarity=0.411 Sum_probs=35.4
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~ 90 (212)
...++++||-.|+|. |...+.+++. |..+|+++|.+++..+.+++.
T Consensus 187 ~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a~~l 234 (371)
T 1f8f_A 187 KVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELAKQL 234 (371)
T ss_dssp CCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHHc
Confidence 445788999999875 6666677754 665799999999988888654
No 381
>3cxt_A Dehydrogenase with different specificities; rossman fold, oxidoreductase; HET: NAP GKR; 1.90A {Streptococcus suis} PDB: 3cxr_A* 3o03_A*
Probab=87.61 E-value=3.1 Score=32.46 Aligned_cols=76 Identities=20% Similarity=0.288 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+...+.++.++..|+.+...-
T Consensus 32 l~~k~vlVTGas~g-IG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (291)
T 3cxt_A 32 LKGKIALVTGASYG-IGFAIASAYAKAGA-TIVFNDINQELVDRGMAAYKAAGINAHGYVCDVTDEDGIQAMVAQIESEV 109 (291)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHHc
Confidence 36788888886544 44444 34455 899999998877666655555454678899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 110 g~iD~lvnnAg~~ 122 (291)
T 3cxt_A 110 GIIDILVNNAGII 122 (291)
T ss_dssp CCCCEEEECCCCC
T ss_pred CCCcEEEECCCcC
Confidence 1489999886543
No 382
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=87.58 E-value=3.5 Score=31.54 Aligned_cols=76 Identities=20% Similarity=0.301 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~v~~~~~d~~~~~~~---------- 111 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+.+.+.+... +.++.++..|+.+...-
T Consensus 11 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 89 (267)
T 1iy8_A 11 FTDRVVLITGGGSGLGRATAVRLAAEGA-KLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTER 89 (267)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence 367888888865543 2333444455 8999999987776665555443 34688899998764321
Q ss_pred -CcccEEEEcCCC
Q 028214 112 -GHVDTVVMNPPF 123 (212)
Q Consensus 112 -~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 90 ~g~id~lv~nAg~ 102 (267)
T 1iy8_A 90 FGRIDGFFNNAGI 102 (267)
T ss_dssp HSCCSEEEECCCC
T ss_pred cCCCCEEEECCCc
Confidence 157999988654
No 383
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=87.53 E-value=3 Score=32.40 Aligned_cols=78 Identities=18% Similarity=0.147 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChH-------HHHHHHHHHhhcCCceEEEEcccccCcCC-----
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSD-------SLELASENAADLELDIDFVQCDIRNLEWR----- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~-------~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----- 111 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++. .++.+.+.+...+.++.+++.|+.+...-
T Consensus 7 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 85 (285)
T 3sc4_A 7 LRGKTMFISGGSRGIGLAIAKRVAADGA-NVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVA 85 (285)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHH
Confidence 367889988877664 3344444455 8999998765 34444444444455788999998875321
Q ss_pred ------CcccEEEEcCCCCC
Q 028214 112 ------GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ------~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 86 ~~~~~~g~id~lvnnAg~~~ 105 (285)
T 3sc4_A 86 KTVEQFGGIDICVNNASAIN 105 (285)
T ss_dssp HHHHHHSCCSEEEECCCCCC
T ss_pred HHHHHcCCCCEEEECCCCCC
Confidence 16899998876543
No 384
>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}
Probab=87.40 E-value=3.1 Score=32.92 Aligned_cols=79 Identities=25% Similarity=0.297 Sum_probs=52.9
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC------------hHHHHHHHHHHhhcCCceEEEEcccccCcC
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID------------SDSLELASENAADLELDIDFVQCDIRNLEW 110 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~------------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~ 110 (212)
...++++|-.|++.|+ +...+++.|. +|+.+|.+ +..++.+.+.+...+.++.++..|+.+...
T Consensus 43 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~ 121 (317)
T 3oec_A 43 RLQGKVAFITGAARGQGRTHAVRLAQDGA-DIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLAS 121 (317)
T ss_dssp TTTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-eEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHH
Confidence 3567888888876654 3444445555 89999876 555655555555555578899999876432
Q ss_pred C-----------CcccEEEEcCCCCC
Q 028214 111 R-----------GHVDTVVMNPPFGT 125 (212)
Q Consensus 111 ~-----------~~~D~i~~nppy~~ 125 (212)
- ...|++|.|.-...
T Consensus 122 v~~~~~~~~~~~g~iD~lVnnAg~~~ 147 (317)
T 3oec_A 122 LQAVVDEALAEFGHIDILVSNVGISN 147 (317)
T ss_dssp HHHHHHHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHHHHHHcCCCCEEEECCCCCC
Confidence 1 16899998876543
No 385
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=87.38 E-value=1.2 Score=34.53 Aligned_cols=75 Identities=15% Similarity=0.162 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
++++++|--|+++|+ ++..+++.|. +|+.++.+++..+.+.+ +...+.++.++..|+.+...- .
T Consensus 5 L~gKvalVTGas~GIG~aia~~la~~Ga-~Vv~~~r~~~~~~~~~~-~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G 82 (258)
T 4gkb_A 5 LQDKVVIVTGGASGIGGAISMRLAEERA-IPVVFARHAPDGAFLDA-LAQRQPRATYLPVELQDDAQCRDAVAQTIATFG 82 (258)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCCCHHHHHH-HHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCC-EEEEEECCcccHHHHHH-HHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhC
Confidence 588999999988886 4555566665 89999987655444433 333344788899998764321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
+.|+++.|--.
T Consensus 83 ~iDiLVNnAGi 93 (258)
T 4gkb_A 83 RLDGLVNNAGV 93 (258)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 78999988644
No 386
>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A
Probab=87.16 E-value=3.1 Score=31.97 Aligned_cols=78 Identities=13% Similarity=0.096 Sum_probs=53.2
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|. +...+++.|. +|+.++. ++...+...+.++..+.++.++..|+.+...-
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 105 (271)
T 4iin_A 27 FTGKNVLITGASKGIGAEIAKTLASMGL-KVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSD 105 (271)
T ss_dssp CSCCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc
Confidence 467888888866553 3344444455 8999988 56666666666666666789999998764321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 106 g~id~li~nAg~~~ 119 (271)
T 4iin_A 106 GGLSYLVNNAGVVR 119 (271)
T ss_dssp SSCCEEEECCCCCC
T ss_pred CCCCEEEECCCcCC
Confidence 16899998876643
No 387
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=87.03 E-value=4 Score=31.05 Aligned_cols=76 Identities=26% Similarity=0.320 Sum_probs=50.3
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhc-CCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~v~~~~~d~~~~~~~---------- 111 (212)
.+++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+... +.++.++..|+.+...-
T Consensus 5 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (263)
T 3ai3_A 5 ISGKVAVITGSSSG-IGLAIAEGFAKEGA-HIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSS 82 (263)
T ss_dssp CTTCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHH
Confidence 35778888886554 44443 44455 8999999987766655544433 44688899998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 83 ~g~id~lv~~Ag~~ 96 (263)
T 3ai3_A 83 FGGADILVNNAGTG 96 (263)
T ss_dssp HSSCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 1589999887553
No 388
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=86.83 E-value=3.2 Score=30.91 Aligned_cols=71 Identities=17% Similarity=0.143 Sum_probs=46.0
Q ss_pred CCCCEEEEEcCCcChHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCce-EEEEcccccCcCCC--cccEEEE
Q 028214 47 VSNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDI-DFVQCDIRNLEWRG--HVDTVVM 119 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v-~~~~~d~~~~~~~~--~~D~i~~ 119 (212)
..+++||=.| |+|.++..+++ .|. +|++++.++...+.... . ++ +++.+|+.+..... ..|+|+.
T Consensus 19 l~~~~ilVtG-atG~iG~~l~~~L~~~G~-~V~~~~R~~~~~~~~~~----~--~~~~~~~~Dl~~~~~~~~~~~D~vi~ 90 (236)
T 3e8x_A 19 FQGMRVLVVG-ANGKVARYLLSELKNKGH-EPVAMVRNEEQGPELRE----R--GASDIVVANLEEDFSHAFASIDAVVF 90 (236)
T ss_dssp --CCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHH----T--TCSEEEECCTTSCCGGGGTTCSEEEE
T ss_pred cCCCeEEEEC-CCChHHHHHHHHHHhCCC-eEEEEECChHHHHHHHh----C--CCceEEEcccHHHHHHHHcCCCEEEE
Confidence 3678899888 55666555553 344 89999998776544332 1 47 88999987211111 7899998
Q ss_pred cCCCCC
Q 028214 120 NPPFGT 125 (212)
Q Consensus 120 nppy~~ 125 (212)
+.....
T Consensus 91 ~ag~~~ 96 (236)
T 3e8x_A 91 AAGSGP 96 (236)
T ss_dssp CCCCCT
T ss_pred CCCCCC
Confidence 876543
No 389
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=86.72 E-value=2.5 Score=33.69 Aligned_cols=46 Identities=26% Similarity=0.242 Sum_probs=35.2
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHcCCCeEEEEeCChHHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~ 90 (212)
...++++||-.|+|. |...+.+++....+|+++|.+++..+.+++.
T Consensus 163 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 209 (340)
T 3s2e_A 163 DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARRL 209 (340)
T ss_dssp TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHc
Confidence 455788999999874 6677777765333999999999988887653
No 390
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=86.72 E-value=4.4 Score=31.06 Aligned_cols=77 Identities=23% Similarity=0.333 Sum_probs=50.8
Q ss_pred CCCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHH-hhcCCceEEEEcccccCcCC---------
Q 028214 46 DVSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~v~~~~~d~~~~~~~--------- 111 (212)
...++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+ ...+.++.++..|+.+...-
T Consensus 18 ~l~~k~~lVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~ 95 (267)
T 1vl8_A 18 DLRGRVALVTGGSRG-LGFGIAQGLAEAGC-SVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKE 95 (267)
T ss_dssp CCTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHH
Confidence 346788888886544 44444 44455 8999999987776555544 33344678889998764321
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 96 ~~g~iD~lvnnAg~~ 110 (267)
T 1vl8_A 96 KFGKLDTVVNAAGIN 110 (267)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HcCCCCEEEECCCcC
Confidence 1589999887654
No 391
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=86.66 E-value=3 Score=32.37 Aligned_cols=76 Identities=18% Similarity=0.160 Sum_probs=52.0
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccC-cCC-----------
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNL-EWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~-~~~----------- 111 (212)
+++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+. ++.++..|+.+. ..-
T Consensus 11 ~~k~vlITGas~GIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 11 KRRCAVVTGGNKGIGFEICKQLSSNGI-MVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp -CCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCcEEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 56788877766553 3333444455 899999998877776666655443 789999999886 210
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 90 g~iD~lv~nAg~~ 102 (311)
T 3o26_A 90 GKLDILVNNAGVA 102 (311)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 1689999987654
No 392
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=86.54 E-value=3.9 Score=31.05 Aligned_cols=75 Identities=23% Similarity=0.282 Sum_probs=50.2
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++ |.++..++ +.|. +|+.++.++...+...+.+...+.++.++..|+.+...-
T Consensus 12 l~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 89 (260)
T 2zat_A 12 LENKVALVTAST-DGIGLAIARRLAQDGA-HVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLH 89 (260)
T ss_dssp TTTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 467788877755 44444444 4455 899999998777666555555455688888998764321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 90 g~iD~lv~~Ag~ 101 (260)
T 2zat_A 90 GGVDILVSNAAV 101 (260)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999988654
No 393
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=86.42 E-value=1 Score=35.45 Aligned_cols=52 Identities=10% Similarity=0.080 Sum_probs=34.7
Q ss_pred CCCChHHHHHHHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHH
Q 028214 26 YPTGPHIASRMLYTAENSFGDVSNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSL 84 (212)
Q Consensus 26 ~~~~~~~~~~~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~ 84 (212)
|+.+..-....+..... . ...+.+|++||+|.++..+. ..+++..|+|++.+
T Consensus 17 y~GgK~~l~~~i~~~lp---~-~~~~yvEpF~GggaV~~~~~---~~~~i~ND~n~~Li 68 (284)
T 2dpm_A 17 WTGGKRQLLPVIRELIP---K-TYNRYFEPFVGGGALFFDLA---PKDAVINDFNAELI 68 (284)
T ss_dssp CTTCCGGGHHHHHHHSC---S-SCSCEEETTCTTCHHHHHHC---CSEEEEEESCHHHH
T ss_pred cCccHHHHHHHHHHHhc---c-ccCEEEeecCCccHHHHhhh---ccceeeeecchHHH
Confidence 55554444333333332 1 24689999999999988663 25899999998775
No 394
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=86.36 E-value=3.1 Score=31.74 Aligned_cols=76 Identities=16% Similarity=0.142 Sum_probs=52.1
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.+ +.++...+.+...++..+.++.++..|+.+...-
T Consensus 6 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (259)
T 3edm_A 6 FTNRTIVVAGAGRDIGRACAIRFAQEGA-NVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKF 84 (259)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHh
Confidence 467899998877664 3444455565 78777 6777777666666665555788999998875321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 85 g~id~lv~nAg~ 96 (259)
T 3edm_A 85 GEIHGLVHVAGG 96 (259)
T ss_dssp CSEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 158999988643
No 395
>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}
Probab=86.35 E-value=2.7 Score=32.76 Aligned_cols=77 Identities=18% Similarity=0.125 Sum_probs=52.6
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCC--CeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccCcCC---------
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGA--DQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~--~~v~~~D~~~~~~~~a~~~~~~~--~~~v~~~~~d~~~~~~~--------- 111 (212)
.++++|-.|++.|+ +...+++.|. .+|+.++.++..++.+.+.+... +.++.++..|+.+...-
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 67889988876554 2333333343 38999999988887776666543 33788899998875421
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 112 ~~g~iD~lVnnAG~~ 126 (287)
T 3rku_A 112 EFKDIDILVNNAGKA 126 (287)
T ss_dssp GGCSCCEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 1689999887653
No 396
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=86.20 E-value=3.7 Score=31.61 Aligned_cols=78 Identities=15% Similarity=0.157 Sum_probs=52.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++. ++...+...+.+...+.++.++..|+.+...-
T Consensus 26 l~~k~vlVTGas~gIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~ 104 (269)
T 4dmm_A 26 LTDRIALVTGASRGIGRAIALELAAAGA-KVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERW 104 (269)
T ss_dssp TTTCEEEETTCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467888888866553 3334444555 8888887 66666666666666555788999998875321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 105 g~id~lv~nAg~~~ 118 (269)
T 4dmm_A 105 GRLDVLVNNAGITR 118 (269)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 16899998876543
No 397
>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=86.10 E-value=3.8 Score=31.62 Aligned_cols=76 Identities=25% Similarity=0.306 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcCC--------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR-------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~-------- 111 (212)
..++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+...+. ++.++..|+.+...-
T Consensus 4 l~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~ 81 (280)
T 1xkq_A 4 FSNKTVIITGSSNG-IGRTTAILFAQEGA-NVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTL 81 (280)
T ss_dssp TTTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHH
Confidence 35678887775544 44444 44455 899999998877766665554443 688899998864321
Q ss_pred ---CcccEEEEcCCCC
Q 028214 112 ---GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ---~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 82 ~~~g~iD~lv~nAg~~ 97 (280)
T 1xkq_A 82 KQFGKIDVLVNNAGAA 97 (280)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCCC
Confidence 1589999887543
No 398
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=86.10 E-value=4.1 Score=31.70 Aligned_cols=76 Identities=16% Similarity=0.172 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChH-HHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSD-SLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~-~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++. ..+.+.+..+..+.++.++..|+.+...-
T Consensus 45 l~gk~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 123 (291)
T 3ijr_A 45 LKGKNVLITGGDSGIGRAVSIAFAKEGA-NIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQL 123 (291)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 467889988876654 3344444555 8999998764 44445555555555788999999875321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 124 g~iD~lvnnAg~ 135 (291)
T 3ijr_A 124 GSLNILVNNVAQ 135 (291)
T ss_dssp SSCCEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999988554
No 399
>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}
Probab=85.92 E-value=7.6 Score=27.69 Aligned_cols=66 Identities=23% Similarity=0.378 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCcChHHHHHH----Hc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccC---cC---CCcccE
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNL---EW---RGHVDT 116 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~---~~---~~~~D~ 116 (212)
.+++++=+|+| .++..++ +. +. +|+++|.+++.++.++.. .+.++.+|..+. .. -..+|+
T Consensus 38 ~~~~v~IiG~G--~~G~~~a~~L~~~~g~-~V~vid~~~~~~~~~~~~------g~~~~~gd~~~~~~l~~~~~~~~ad~ 108 (183)
T 3c85_A 38 GHAQVLILGMG--RIGTGAYDELRARYGK-ISLGIEIREEAAQQHRSE------GRNVISGDATDPDFWERILDTGHVKL 108 (183)
T ss_dssp TTCSEEEECCS--HHHHHHHHHHHHHHCS-CEEEEESCHHHHHHHHHT------TCCEEECCTTCHHHHHTBCSCCCCCE
T ss_pred CCCcEEEECCC--HHHHHHHHHHHhccCC-eEEEEECCHHHHHHHHHC------CCCEEEcCCCCHHHHHhccCCCCCCE
Confidence 45678888875 4433333 34 44 799999999887765532 355677776542 11 126898
Q ss_pred EEEcCC
Q 028214 117 VVMNPP 122 (212)
Q Consensus 117 i~~npp 122 (212)
|+.-.|
T Consensus 109 vi~~~~ 114 (183)
T 3c85_A 109 VLLAMP 114 (183)
T ss_dssp EEECCS
T ss_pred EEEeCC
Confidence 887544
No 400
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=85.91 E-value=4.8 Score=29.97 Aligned_cols=75 Identities=25% Similarity=0.307 Sum_probs=50.3
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHh-hcCCceEEEEcccccCcC-----C------C
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAA-DLELDIDFVQCDIRNLEW-----R------G 112 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~~-----~------~ 112 (212)
++++|-.|++.| ++..++ +.|. +|+.++.++...+.+.+.+. ..+.++.++..|+.+... . .
T Consensus 2 ~k~vlITGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 79 (235)
T 3l77_A 2 MKVAVITGASRG-IGEAIARALARDGY-ALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFG 79 (235)
T ss_dssp CCEEEEESCSSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHS
T ss_pred CCEEEEECCCcH-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcC
Confidence 467787776544 444444 4455 79999999887776655554 445578899999876532 1 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 80 ~id~li~~Ag~~~ 92 (235)
T 3l77_A 80 DVDVVVANAGLGY 92 (235)
T ss_dssp SCSEEEECCCCCC
T ss_pred CCCEEEECCcccc
Confidence 6899998876543
No 401
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=85.71 E-value=0.74 Score=35.41 Aligned_cols=71 Identities=23% Similarity=0.289 Sum_probs=49.0
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-------CcccE
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------GHVDT 116 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-------~~~D~ 116 (212)
+.++++|--|+++|+ +...+++.|. +|+.+|.+++.++.+ .+.++..++.|+.+...- .+.|+
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga-~Vv~~~~~~~~~~~~------~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDi 81 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGA-EVVALGLDADGVHAP------RHPRIRREELDITDSQRLQRLFEALPRLDV 81 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTTSTTSC------CCTTEEEEECCTTCHHHHHHHHHHCSCCSE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHhhh------hcCCeEEEEecCCCHHHHHHHHHhcCCCCE
Confidence 478999999988886 4555556666 899999987654321 122678888888764221 27899
Q ss_pred EEEcCCCC
Q 028214 117 VVMNPPFG 124 (212)
Q Consensus 117 i~~nppy~ 124 (212)
++.|--..
T Consensus 82 LVNNAGi~ 89 (242)
T 4b79_A 82 LVNNAGIS 89 (242)
T ss_dssp EEECCCCC
T ss_pred EEECCCCC
Confidence 99886543
No 402
>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}
Probab=85.51 E-value=2.4 Score=33.27 Aligned_cols=77 Identities=19% Similarity=0.164 Sum_probs=53.3
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcC-CceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLE-LDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~-~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+ .++.++..|+.+...-
T Consensus 39 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 117 (293)
T 3rih_A 39 LSARSVLVTGGTKGIGRGIATVFARAGA-NVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAF 117 (293)
T ss_dssp CTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHc
Confidence 467788888865553 3334444555 89999999887777766666555 3788999999875321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 118 g~iD~lvnnAg~~ 130 (293)
T 3rih_A 118 GALDVVCANAGIF 130 (293)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1579999887654
No 403
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=85.37 E-value=9.2 Score=29.47 Aligned_cols=75 Identities=25% Similarity=0.311 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.++...+...... +.++.++..|+.+...- .
T Consensus 25 l~~k~vlVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 100 (277)
T 4dqx_A 25 LNQRVCIVTGGGSGIGRATAELFAKNGA-YVVVADVNEDAAVRVANEI---GSKAFGVRVDVSSAKDAESMVEKTTAKWG 100 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 467889988876654 3344445555 8999999987665554432 33688899998764321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
+.|+++.|.-+..
T Consensus 101 ~iD~lv~nAg~~~ 113 (277)
T 4dqx_A 101 RVDVLVNNAGFGT 113 (277)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCCcCC
Confidence 6899998876543
No 404
>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}
Probab=85.30 E-value=4.7 Score=32.46 Aligned_cols=79 Identities=18% Similarity=0.149 Sum_probs=51.8
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHH-------HHHHHHHHhhcCCceEEEEcccccCcCC----
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDS-------LELASENAADLELDIDFVQCDIRNLEWR---- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~-------~~~a~~~~~~~~~~v~~~~~d~~~~~~~---- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++.++.. ++.+.+.++..+.++.++..|+.+...-
T Consensus 42 ~l~gk~vlVTGas~GIG~aia~~La~~Ga-~Vvl~~r~~~~~~~l~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~ 120 (346)
T 3kvo_A 42 RLAGCTVFITGASRGIGKAIALKAAKDGA-NIVIAAKTAQPHPKLLGTIYTAAEEIEAVGGKALPCIVDVRDEQQISAAV 120 (346)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCCSCCSSSCCCHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHH
T ss_pred CCCCCEEEEeCCChHHHHHHHHHHHHCCC-EEEEEECChhhhhhhHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHH
Confidence 3467889988876654 3344444455 89999887652 4444445555555788899999875321
Q ss_pred -------CcccEEEEcCCCCC
Q 028214 112 -------GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 -------~~~D~i~~nppy~~ 125 (212)
...|++|.|.-...
T Consensus 121 ~~~~~~~g~iDilVnnAG~~~ 141 (346)
T 3kvo_A 121 EKAIKKFGGIDILVNNASAIS 141 (346)
T ss_dssp HHHHHHHSCCCEEEECCCCCC
T ss_pred HHHHHHcCCCCEEEECCCCCC
Confidence 16899998876543
No 405
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=85.27 E-value=2.3 Score=32.06 Aligned_cols=75 Identities=21% Similarity=0.336 Sum_probs=48.9
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC------C-Cccc
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW------R-GHVD 115 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~------~-~~~D 115 (212)
..+++++|-.|++.|. +...+++.|. +|+.++.++..++...+.+.. ++.+...|+.+... . ...|
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~~~~~~~~~~~id 86 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGS-KVIISGSNEEKLKSLGNALKD---NYTIEVCNLANKEECSNLISKTSNLD 86 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHCS---SEEEEECCTTSHHHHHHHHHTCSCCS
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHhcc---CccEEEcCCCCHHHHHHHHHhcCCCC
Confidence 3477888888865553 2333444454 899999998877766555432 57888888876421 1 1689
Q ss_pred EEEEcCCCC
Q 028214 116 TVVMNPPFG 124 (212)
Q Consensus 116 ~i~~nppy~ 124 (212)
+++.|.-..
T Consensus 87 ~li~~Ag~~ 95 (249)
T 3f9i_A 87 ILVCNAGIT 95 (249)
T ss_dssp EEEECCC--
T ss_pred EEEECCCCC
Confidence 999887654
No 406
>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}
Probab=84.95 E-value=4.8 Score=30.29 Aligned_cols=75 Identities=25% Similarity=0.251 Sum_probs=49.5
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++|-.|++ |.++..++ +.|. +|+.++. ++...+.+.+.++..+.++.++..|+.+...-
T Consensus 3 ~~k~vlVTGas-~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 80 (246)
T 2uvd_A 3 KGKVALVTGAS-RGIGRAIAIDLAKQGA-NVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVF 80 (246)
T ss_dssp TTCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 46778877754 55544444 4454 8999998 77776666555554454788899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 81 g~id~lv~nAg~~ 93 (246)
T 2uvd_A 81 GQVDILVNNAGVT 93 (246)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1589999887654
No 407
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=84.88 E-value=5.4 Score=30.20 Aligned_cols=73 Identities=21% Similarity=0.217 Sum_probs=48.7
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cc
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~ 113 (212)
++++|-.|++ |.++..++ +.|. +|+.++.++...+...+.+...+.++.++..|+.+...- ..
T Consensus 2 ~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 79 (256)
T 1geg_A 2 KKVALVTGAG-QGIGKAIALRLVKDGF-AVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGG 79 (256)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTC
T ss_pred CCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3567777755 44444444 4455 899999998777666555554444688899998764321 16
Q ss_pred ccEEEEcCCC
Q 028214 114 VDTVVMNPPF 123 (212)
Q Consensus 114 ~D~i~~nppy 123 (212)
.|+++.|.-.
T Consensus 80 id~lv~nAg~ 89 (256)
T 1geg_A 80 FDVIVNNAGV 89 (256)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 8999988754
No 408
>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*
Probab=84.72 E-value=4.5 Score=30.37 Aligned_cols=76 Identities=25% Similarity=0.330 Sum_probs=51.3
Q ss_pred CCCCEEEEEcCCcChHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|=.| |+|.++..+++ .|. +|++++.++...+...+.+...+.++.++.+|+.+...-
T Consensus 9 ~~~~~vlVtG-asggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 86 (255)
T 1fmc_A 9 LDGKCAIITG-AGAGIGKEIAITFATAGA-SVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL 86 (255)
T ss_dssp CTTCEEEETT-TTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhc
Confidence 3567888777 55666655554 344 899999998777666665555444788889998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.+....
T Consensus 87 ~~~d~vi~~Ag~~ 99 (255)
T 1fmc_A 87 GKVDILVNNAGGG 99 (255)
T ss_dssp SSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1589999876543
No 409
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=84.67 E-value=4.9 Score=30.45 Aligned_cols=77 Identities=18% Similarity=0.167 Sum_probs=53.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhc--C-CceEEEEcccccCcCC---------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADL--E-LDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~-~~v~~~~~d~~~~~~~--------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+... + .++.++..|+.+...-
T Consensus 5 ~~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 83 (250)
T 3nyw_A 5 KQKGLAIITGASQGIGAVIAAGLATDGY-RVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQ 83 (250)
T ss_dssp CCCCEEEEESTTSHHHHHHHHHHHHHTC-EEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHH
Confidence 367788888876654 3444445566 8999999988887776665543 2 3678899998874321
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 84 ~~g~iD~lvnnAg~~ 98 (250)
T 3nyw_A 84 KYGAVDILVNAAAMF 98 (250)
T ss_dssp HHCCEEEEEECCCCC
T ss_pred hcCCCCEEEECCCcC
Confidence 1589999887654
No 410
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=84.62 E-value=2.7 Score=33.81 Aligned_cols=45 Identities=29% Similarity=0.344 Sum_probs=34.4
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |..++.+++. |..+|+++|.++...+.+++
T Consensus 168 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 214 (356)
T 1pl8_A 168 GVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAKE 214 (356)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHH
Confidence 455789999999864 5666666654 55589999999988888764
No 411
>3nzo_A UDP-N-acetylglucosamine 4,6-dehydratase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG, NAD; HET: MSE NAD; 2.10A {Vibrio fischeri} PDB: 3pvz_A*
Probab=84.50 E-value=3.2 Score=34.03 Aligned_cols=77 Identities=21% Similarity=0.317 Sum_probs=53.0
Q ss_pred CCCEEEEEcCCcChHHHHHHHc----CCCeEEEEeCChHHHHHHHHHHhhc----CCceEEEEcccccCcC------CCc
Q 028214 48 SNKVVADFGCGCGTLGAAATLL----GADQVIAIDIDSDSLELASENAADL----ELDIDFVQCDIRNLEW------RGH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~----~~~~v~~~D~~~~~~~~a~~~~~~~----~~~v~~~~~d~~~~~~------~~~ 113 (212)
++++||-.| |+|.++..+++. |..+|++++.++.........+... +.++.++.+|+.+... ...
T Consensus 34 ~~k~vLVTG-atG~IG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~v~~~~~Dl~d~~~~~~~~~~~~ 112 (399)
T 3nzo_A 34 SQSRFLVLG-GAGSIGQAVTKEIFKRNPQKLHVVDISENNMVELVRDIRSSFGYINGDFQTFALDIGSIEYDAFIKADGQ 112 (399)
T ss_dssp HTCEEEEET-TTSHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHHTCCCSSEEEEECCCTTSHHHHHHHHHCCC
T ss_pred CCCEEEEEc-CChHHHHHHHHHHHHCCCCEEEEEECCcchHHHHHHHHHHhcCCCCCcEEEEEEeCCCHHHHHHHHHhCC
Confidence 467888887 567777666643 5468999999987776655544332 1368899999887531 127
Q ss_pred ccEEEEcCCCCC
Q 028214 114 VDTVVMNPPFGT 125 (212)
Q Consensus 114 ~D~i~~nppy~~ 125 (212)
+|+|+.+..+.+
T Consensus 113 ~D~Vih~Aa~~~ 124 (399)
T 3nzo_A 113 YDYVLNLSALKH 124 (399)
T ss_dssp CSEEEECCCCCC
T ss_pred CCEEEECCCcCC
Confidence 899997766543
No 412
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=84.48 E-value=4.5 Score=31.21 Aligned_cols=78 Identities=22% Similarity=0.252 Sum_probs=50.2
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------C
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------G 112 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------~ 112 (212)
...++++|-.|++.|+ +...+++.|. +|+.++-++.. +...+.+...+.++.++..|+.+...- .
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~-~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g 105 (273)
T 3uf0_A 28 SLAGRTAVVTGAGSGIGRAIAHGYARAGA-HVLAWGRTDGV-KEVADEIADGGGSAEAVVADLADLEGAANVAEELAATR 105 (273)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSTHH-HHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHS
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEcCHHHH-HHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcC
Confidence 3578899999876654 3444445555 89999965443 333344444444788899998875321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 106 ~iD~lv~nAg~~~ 118 (273)
T 3uf0_A 106 RVDVLVNNAGIIA 118 (273)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCcEEEECCCCCC
Confidence 6899998876543
No 413
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=84.46 E-value=2.2 Score=34.21 Aligned_cols=48 Identities=21% Similarity=0.230 Sum_probs=35.4
Q ss_pred hcCCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 028214 43 SFGDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 43 ~~~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~ 90 (212)
.....++++||-.|+|. |..++.+++. |..+|+++|.+++..+.+++.
T Consensus 161 ~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~~l 210 (352)
T 3fpc_A 161 LANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIALEY 210 (352)
T ss_dssp HTTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHHHH
T ss_pred hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHHHh
Confidence 33456788999998764 5566666655 555899999999888887664
No 414
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=84.29 E-value=6 Score=30.63 Aligned_cols=75 Identities=29% Similarity=0.398 Sum_probs=50.0
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhc-CCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADL-ELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~-~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++|=.|++ |.++..++ +.|. +|++++.++...+...+.+... +.++.++.+|+.+...-
T Consensus 25 ~~k~vlITGas-ggiG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (302)
T 1w6u_A 25 QGKVAFITGGG-TGLGKGMTTLLSSLGA-QCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVA 102 (302)
T ss_dssp TTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHc
Confidence 56788888855 44444444 4454 8999999987776655554432 44788999998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 103 g~id~li~~Ag~~ 115 (302)
T 1w6u_A 103 GHPNIVINNAAGN 115 (302)
T ss_dssp CSCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1569999887643
No 415
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=84.27 E-value=4.4 Score=30.91 Aligned_cols=75 Identities=16% Similarity=0.152 Sum_probs=50.3
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
+++++|-.|++.|+ +...+++.|. +|+.+ +.++...+...+.+...+.++.++..|+.+...- .
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~-~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGY-NIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFG 81 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46778877765543 2333444455 77775 7888777777666666666789999998875321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
+.|+++.|.-.
T Consensus 82 ~id~lv~nAg~ 92 (258)
T 3oid_A 82 RLDVFVNNAAS 92 (258)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 56999988754
No 416
>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*
Probab=84.11 E-value=5.1 Score=31.13 Aligned_cols=60 Identities=18% Similarity=0.062 Sum_probs=41.6
Q ss_pred CCCEEEEEcCCcChHHHHH----HHcCCCeEEEEe-CChHHHHHHHHHHh-hcCCceEEEEcccccCc
Q 028214 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D-~~~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~ 109 (212)
.++++|-.|++.| ++..+ ++.|. +|+.++ .++...+.+.+.+. ..+.++.++..|+.+..
T Consensus 8 ~~k~~lVTGas~G-IG~aia~~la~~G~-~V~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~ 73 (291)
T 1e7w_A 8 TVPVALVTGAAKR-LGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 73 (291)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-eEEEEcCCCHHHHHHHHHHHhhhcCCeeEEEEeecCCcc
Confidence 5678887776555 44444 44455 899999 99877776665554 33447889999998765
No 417
>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A
Probab=84.10 E-value=5.3 Score=30.29 Aligned_cols=74 Identities=19% Similarity=0.145 Sum_probs=49.8
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC------------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------------ 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~------------ 111 (212)
.++++|-.|+ +|.++..++ +.|. +|+.++.++...+.....+...+.++.++..|+.+...-
T Consensus 13 ~~k~vlITGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 90 (266)
T 1xq1_A 13 KAKTVLVTGG-TKGIGHAIVEEFAGFGA-VIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFG 90 (266)
T ss_dssp TTCEEEETTT-TSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHT
T ss_pred CCCEEEEECC-CCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhC
Confidence 5677887775 555555444 3454 899999998777666665555455788899998764210
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 91 ~~id~li~~Ag~ 102 (266)
T 1xq1_A 91 GKLDILINNLGA 102 (266)
T ss_dssp TCCSEEEEECCC
T ss_pred CCCcEEEECCCC
Confidence 257999987654
No 418
>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=84.07 E-value=4.8 Score=31.44 Aligned_cols=76 Identities=26% Similarity=0.297 Sum_probs=51.2
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcCC--------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWR-------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~-------- 111 (212)
..++++|-.|++. .++..++ +.|. +|+.++.++...+.+.+.+...+. ++.++..|+.+...-
T Consensus 24 l~~k~vlVTGas~-gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 101 (297)
T 1xhl_A 24 FSGKSVIITGSSN-GIGRSAAVIFAKEGA-QVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTL 101 (297)
T ss_dssp CTTCEEEETTCSS-HHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHH
Confidence 3677888777554 4444444 4455 899999998877766665555444 688899998764321
Q ss_pred ---CcccEEEEcCCCC
Q 028214 112 ---GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ---~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 102 ~~~g~iD~lvnnAG~~ 117 (297)
T 1xhl_A 102 AKFGKIDILVNNAGAN 117 (297)
T ss_dssp HHHSCCCEEEECCCCC
T ss_pred HhcCCCCEEEECCCcC
Confidence 1589999887643
No 419
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=83.97 E-value=4.4 Score=30.66 Aligned_cols=75 Identities=23% Similarity=0.271 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+...... +.++.++..|+.+...- .
T Consensus 4 l~gk~vlVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 79 (247)
T 3rwb_A 4 LAGKTALVTGAAQGIGKAIAARLAADGA-TVIVSDINAEGAKAAAASI---GKKARAIAADISDPGSVKALFAEIQALTG 79 (247)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---CTTEEECCCCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHHCC
Confidence 477889988876654 3444445555 8999999987766655444 33688889998764321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 80 ~id~lv~nAg~~~ 92 (247)
T 3rwb_A 80 GIDILVNNASIVP 92 (247)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 5899998876543
No 420
>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2
Probab=83.89 E-value=7.2 Score=30.23 Aligned_cols=75 Identities=24% Similarity=0.294 Sum_probs=50.7
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhh-----cCCceEEEEcccccCcCC------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAAD-----LELDIDFVQCDIRNLEWR------ 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~-----~~~~v~~~~~d~~~~~~~------ 111 (212)
..++++|-.|++ |.++..++ +.|. +|+.++.++...+.+.+.+.. .+.++.++.+|+.+...-
T Consensus 16 l~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~ 93 (303)
T 1yxm_A 16 LQGQVAIVTGGA-TGIGKAIVKELLELGS-NVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKS 93 (303)
T ss_dssp TTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHH
T ss_pred CCCCEEEEECCC-cHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHH
Confidence 367788888854 55555444 3454 899999998777666555544 234788999998764321
Q ss_pred -----CcccEEEEcCCC
Q 028214 112 -----GHVDTVVMNPPF 123 (212)
Q Consensus 112 -----~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 94 ~~~~~g~id~li~~Ag~ 110 (303)
T 1yxm_A 94 TLDTFGKINFLVNNGGG 110 (303)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 148999988754
No 421
>1yf3_A DNA adenine methylase; T4DAM, methyltransferase, transferase-DNA complex; HET: DNA SAH; 2.29A {Enterobacteria phage T4} SCOP: c.66.1.28 PDB: 1yfj_A* 1yfl_A* 1q0s_A* 1q0t_A*
Probab=83.87 E-value=1.8 Score=33.58 Aligned_cols=29 Identities=21% Similarity=0.331 Sum_probs=24.1
Q ss_pred ceEEEEcccccCcCCCcccEEEEcCCCCCC
Q 028214 97 DIDFVQCDIRNLEWRGHVDTVVMNPPFGTR 126 (212)
Q Consensus 97 ~v~~~~~d~~~~~~~~~~D~i~~nppy~~~ 126 (212)
++++.+.|+.+.. ...=|+|++||||...
T Consensus 149 ~v~i~~~Df~~~i-~~~~~fvY~DPPY~~~ 177 (259)
T 1yf3_A 149 KIIFSSLHFKDVK-ILDGDFVYVDPPYLIT 177 (259)
T ss_dssp GEEEECCCGGGCC-CCTTEEEEECCCCTTS
T ss_pred CCEEEcCCHHHHh-CCCCeEEEECCCCCCc
Confidence 6999999999986 3356899999999764
No 422
>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A
Probab=83.86 E-value=10 Score=29.64 Aligned_cols=75 Identities=11% Similarity=-0.019 Sum_probs=48.3
Q ss_pred CCCEEEEEcCCcChHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEE-EcccccCcCCC----cccEE
Q 028214 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAAD-LELDIDFV-QCDIRNLEWRG----HVDTV 117 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~v~~~-~~d~~~~~~~~----~~D~i 117 (212)
++++||-.| |+|.++..+++ .|. +|++++.++...+.....+.. .+.+++++ .+|+.+...-. .+|+|
T Consensus 10 ~~~~vlVTG-atG~iG~~l~~~L~~~g~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~v 87 (342)
T 1y1p_A 10 EGSLVLVTG-ANGFVASHVVEQLLEHGY-KVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGV 87 (342)
T ss_dssp TTCEEEEET-TTSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEE
T ss_pred CCCEEEEEC-CccHHHHHHHHHHHHCCC-EEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEE
Confidence 567888777 56777666654 344 899999987665544333322 12267888 79987654221 68999
Q ss_pred EEcCCCC
Q 028214 118 VMNPPFG 124 (212)
Q Consensus 118 ~~nppy~ 124 (212)
+.+-...
T Consensus 88 ih~A~~~ 94 (342)
T 1y1p_A 88 AHIASVV 94 (342)
T ss_dssp EECCCCC
T ss_pred EEeCCCC
Confidence 9776543
No 423
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=83.70 E-value=7.2 Score=29.61 Aligned_cols=75 Identities=17% Similarity=0.171 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++..++...+.. +.++.++..|+.+...- .
T Consensus 6 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 81 (255)
T 4eso_A 6 YQGKKAIVIGGTHGMGLATVRRLVEGGA-EVLLTGRNESNIARIREEF---GPRVHALRSDIADLNEIAVLGAAAGQTLG 81 (255)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCcceEEEccCCCHHHHHHHHHHHHHHhC
Confidence 477899988876654 3444445555 8999999988776665544 22688999998875321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 82 ~id~lv~nAg~~~ 94 (255)
T 4eso_A 82 AIDLLHINAGVSE 94 (255)
T ss_dssp SEEEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998876543
No 424
>3pvc_A TRNA 5-methylaminomethyl-2-thiouridine biosynthes bifunctional protein MNMC; structural genomics, PSI-biology; HET: FAD; 2.31A {Yersinia pestis} PDB: 3sgl_A*
Probab=83.70 E-value=5.7 Score=35.12 Aligned_cols=96 Identities=14% Similarity=0.092 Sum_probs=55.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc-----------C--CCeEEEEeCCh---HHHHHHHHH-----------Hhhc------
Q 028214 48 SNKVVADFGCGCGTLGAAATLL-----------G--ADQVIAIDIDS---DSLELASEN-----------AADL------ 94 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~-----------~--~~~v~~~D~~~---~~~~~a~~~-----------~~~~------ 94 (212)
+.-+|+|+|-|+|...+.+.+. . .-+++++|..| +-+..+-.. ...+
T Consensus 58 ~~~~i~e~gfG~G~n~l~~~~~~~~~~~~~p~~~~~~l~~~s~E~~p~~~~~l~~~~~~~~~~~~~~~~l~~~~~~~~~~ 137 (689)
T 3pvc_A 58 QSCIFAETGFGTGLNFLTLWRDFALFRQQSPNATLRRLHYISFEKYPLHVADLASAHARWPELASFAEQLRAQWPLPLAG 137 (689)
T ss_dssp SEEEEEEECCTTSHHHHHHHHHHHHHHHHCTTSSCCEEEEEEEESSCCCHHHHHHHHTTCGGGHHHHHHHHHTCCCCCSE
T ss_pred CceEEEEecCchHHHHHHHHHHHHHhhhhCCCCCCceEEEEEeeCCCCCHHHHHHHHHhCcchhHHHHHHHHhCcccCCC
Confidence 3458999999999865554432 0 13689999844 333332211 1111
Q ss_pred ---------CCceEEEEcccccCcCC------CcccEEEEcCCCCCCCC-CchHHHHHHHHhhcC
Q 028214 95 ---------ELDIDFVQCDIRNLEWR------GHVDTVVMNPPFGTRKK-GVDMDFLSMALKVAS 143 (212)
Q Consensus 95 ---------~~~v~~~~~d~~~~~~~------~~~D~i~~nppy~~~~~-~~~~~~l~~~~~~~~ 143 (212)
.+.++++.||+.+.... ..+|.++.|+.-..... -=...++....+..+
T Consensus 138 ~~r~~~~~~~~~l~l~~gd~~~~l~~~~~~~~~~~da~flD~f~p~~np~~w~~~~~~~l~~~~~ 202 (689)
T 3pvc_A 138 CHRILLADGAITLDLWFGDVNTLLPTLDDSLNNQVDAWFLDGFAPAKNPDMWNEQLFNAMARMTR 202 (689)
T ss_dssp EEEEEETTTTEEEEEEESCHHHHGGGCCGGGTTCEEEEEECSSCC--CCTTCSHHHHHHHHHHEE
T ss_pred ceEEEecCCcEEEEEEccCHHHHHhhcccccCCceeEEEECCCCCCCChhhhhHHHHHHHHHHhC
Confidence 12577899998765432 37999999874222211 123456666666654
No 425
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=83.67 E-value=3.3 Score=32.78 Aligned_cols=78 Identities=21% Similarity=0.225 Sum_probs=52.3
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC----------hHHHHHHHHHHhhcCCceEEEEcccccCcCC--
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID----------SDSLELASENAADLELDIDFVQCDIRNLEWR-- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~----------~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.+ ....+.....+...+.++.++..|+.+...-
T Consensus 25 l~gk~vlVTGas~GIG~aia~~la~~G~-~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 103 (322)
T 3qlj_A 25 VDGRVVIVTGAGGGIGRAHALAFAAEGA-RVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAG 103 (322)
T ss_dssp TTTCEEEETTTTSHHHHHHHHHHHHTTC-EEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHH
Confidence 467888888866553 3344445555 89999987 5566666666665555788899998774321
Q ss_pred ---------CcccEEEEcCCCCC
Q 028214 112 ---------GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ---------~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 104 ~~~~~~~~~g~iD~lv~nAg~~~ 126 (322)
T 3qlj_A 104 LIQTAVETFGGLDVLVNNAGIVR 126 (322)
T ss_dssp HHHHHHHHHSCCCEEECCCCCCC
T ss_pred HHHHHHHHcCCCCEEEECCCCCC
Confidence 15799998876543
No 426
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=83.62 E-value=4 Score=31.50 Aligned_cols=75 Identities=16% Similarity=0.210 Sum_probs=50.1
Q ss_pred CCCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.| ++..+ ++.|. +|+.++.++...+...+.+...+ ++.++..|+.+...-
T Consensus 27 l~~k~vlVTGas~g-IG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~l~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~~ 103 (276)
T 2b4q_A 27 LAGRIALVTGGSRG-IGQMIAQGLLEAGA-RVFICARDAEACADTATRLSAYG-DCQAIPADLSSEAGARRLAQALGELS 103 (276)
T ss_dssp CTTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHHTTSS-CEEECCCCTTSHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCh-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcC-ceEEEEeeCCCHHHHHHHHHHHHHhc
Confidence 36778888886544 44443 44454 89999999877766655554444 678888888764311
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 104 g~iD~lvnnAg~~ 116 (276)
T 2b4q_A 104 ARLDILVNNAGTS 116 (276)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1589999887543
No 427
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=83.45 E-value=6.6 Score=29.83 Aligned_cols=77 Identities=17% Similarity=0.201 Sum_probs=53.7
Q ss_pred CCCCEEEEEcCC--cCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC---------
Q 028214 47 VSNKVVADFGCG--CGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G--~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~--------- 111 (212)
.+++++|-.|++ +|+ +...+++.|. +|+.++.++...+.+.+.....+. ++.++..|+.+...-
T Consensus 5 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 83 (266)
T 3oig_A 5 LEGRNIVVMGVANKRSIAWGIARSLHEAGA-RLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKE 83 (266)
T ss_dssp CTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHH
T ss_pred cCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHH
Confidence 467899999976 443 4455555555 899999887666666665555444 688999999875421
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|..+.
T Consensus 84 ~~g~id~li~~Ag~~ 98 (266)
T 3oig_A 84 QVGVIHGIAHCIAFA 98 (266)
T ss_dssp HHSCCCEEEECCCCC
T ss_pred HhCCeeEEEEccccc
Confidence 1579999887654
No 428
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=83.12 E-value=6.9 Score=29.94 Aligned_cols=78 Identities=26% Similarity=0.293 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++. ++...+...+.++..+.++.++..|+.+...-
T Consensus 16 l~~k~~lVTGas~gIG~aia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 94 (270)
T 3is3_A 16 LDGKVALVTGSGRGIGAAVAVHLGRLGA-KVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHF 94 (270)
T ss_dssp CTTCEEEESCTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467888888876554 3444445555 7888775 45556666666666565788999998875321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 95 g~id~lvnnAg~~~ 108 (270)
T 3is3_A 95 GHLDIAVSNSGVVS 108 (270)
T ss_dssp SCCCEEECCCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 15799998876543
No 429
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=83.09 E-value=5 Score=30.95 Aligned_cols=71 Identities=17% Similarity=0.378 Sum_probs=48.4
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----------- 111 (212)
.++++|-.|++ |.++..++ +.|. +|++++.++..++.....+...+. ++.++..|+.+...-
T Consensus 27 ~~k~vlITGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~ 104 (286)
T 1xu9_A 27 QGKKVIVTGAS-KGIGREMAYHLAKMGA-HVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLM 104 (286)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 56788877755 44444444 4455 899999998877766655554443 688899998864211
Q ss_pred CcccEEEEc
Q 028214 112 GHVDTVVMN 120 (212)
Q Consensus 112 ~~~D~i~~n 120 (212)
...|+++.|
T Consensus 105 g~iD~li~n 113 (286)
T 1xu9_A 105 GGLDMLILN 113 (286)
T ss_dssp TSCSEEEEC
T ss_pred CCCCEEEEC
Confidence 158999987
No 430
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=82.87 E-value=5.5 Score=30.18 Aligned_cols=74 Identities=19% Similarity=0.200 Sum_probs=48.1
Q ss_pred CCEEEEEcCCcChHHHH----HHHcCCCeEEEEeCChHH--HHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 49 NKVVADFGCGCGTLGAA----ATLLGADQVIAIDIDSDS--LELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~----~~~~~~~~v~~~D~~~~~--~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
++++|-.|++.| ++.. +++.|. +|+.++.++.. .+...+.++..+.++.++..|+.+...-
T Consensus 2 ~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 79 (258)
T 3a28_C 2 SKVAMVTGGAQG-IGRGISEKLAADGF-DIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKL 79 (258)
T ss_dssp CCEEEEETTTSH-HHHHHHHHHHHHTC-EEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCEEEEeCCCcH-HHHHHHHHHHHCCC-EEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 467787786544 4444 444455 89999988766 5555555544444788899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 80 g~iD~lv~nAg~~ 92 (258)
T 3a28_C 80 GGFDVLVNNAGIA 92 (258)
T ss_dssp TCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1589999887654
No 431
>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}
Probab=82.82 E-value=3.5 Score=31.99 Aligned_cols=77 Identities=19% Similarity=0.234 Sum_probs=49.2
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+. .+.++..|+.+...-
T Consensus 31 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 109 (281)
T 4dry_A 31 GEGRIALVTGGGTGVGRGIAQALSAEGY-SVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF 109 (281)
T ss_dssp ---CEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 367788888865543 2333444455 899999998877766665544332 458899998875321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 110 g~iD~lvnnAG~~ 122 (281)
T 4dry_A 110 ARLDLLVNNAGSN 122 (281)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1579999887653
No 432
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=82.81 E-value=5.6 Score=30.11 Aligned_cols=76 Identities=16% Similarity=0.211 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEccc--ccCcCC---------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDI--RNLEWR--------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~--~~~~~~--------- 111 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+...+. ++.++..|+ .+...-
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 88 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGA-TVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAV 88 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHH
Confidence 467889988876553 3344444555 899999998887776665554332 678888888 332110
Q ss_pred --CcccEEEEcCCC
Q 028214 112 --GHVDTVVMNPPF 123 (212)
Q Consensus 112 --~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 89 ~~g~id~lv~nAg~ 102 (252)
T 3f1l_A 89 NYPRLDGVLHNAGL 102 (252)
T ss_dssp HCSCCSEEEECCCC
T ss_pred hCCCCCEEEECCcc
Confidence 168999988764
No 433
>2dpm_A M.dpnii 1, protein (adenine-specific methyltransferase dpnii 1); DNA adenine methyltransferase, methylase; HET: SAM; 1.80A {Streptococcus pneumoniae} SCOP: c.66.1.28
Probab=82.71 E-value=1.9 Score=33.88 Aligned_cols=41 Identities=15% Similarity=0.118 Sum_probs=29.8
Q ss_pred hHHHHHHHHHHhhcCCceEEE--EcccccCcCCC-cccEEEEcCCCCC
Q 028214 81 SDSLELASENAADLELDIDFV--QCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 81 ~~~~~~a~~~~~~~~~~v~~~--~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
++.+..+.+.++ ++++. ++|+.+..... .=|+|++||||..
T Consensus 156 ~~~l~~~~~~l~----~v~i~~~~~Df~~~i~~~~~~~fvY~DPPY~~ 199 (284)
T 2dpm_A 156 EELISAISVYIN----NNQLEIKVGDFEKAIVDVRTGDFVYFDPPYIP 199 (284)
T ss_dssp HHHHHHHHHHHH----HSEEEEEESCGGGGGTTCCTTCEEEECCCCCC
T ss_pred HHHHHHHHHHhC----CCEEEEeCCCHHHHHHhcCCCCEEEeCCCccc
Confidence 455666666665 46666 99999876543 5589999999975
No 434
>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*
Probab=82.64 E-value=2.6 Score=34.95 Aligned_cols=65 Identities=15% Similarity=0.254 Sum_probs=43.7
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC-----CCcccEEEE
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----RGHVDTVVM 119 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~ 119 (212)
..+|+=+|+| .++..++ ..+. .|+++|.|++.++.++.. .+.++.+|..+... -...|+|++
T Consensus 4 ~~~viIiG~G--r~G~~va~~L~~~g~-~vvvId~d~~~v~~~~~~------g~~vi~GDat~~~~L~~agi~~A~~viv 74 (413)
T 3l9w_A 4 GMRVIIAGFG--RFGQITGRLLLSSGV-KMVVLDHDPDHIETLRKF------GMKVFYGDATRMDLLESAGAAKAEVLIN 74 (413)
T ss_dssp CCSEEEECCS--HHHHHHHHHHHHTTC-CEEEEECCHHHHHHHHHT------TCCCEESCTTCHHHHHHTTTTTCSEEEE
T ss_pred CCeEEEECCC--HHHHHHHHHHHHCCC-CEEEEECCHHHHHHHHhC------CCeEEEcCCCCHHHHHhcCCCccCEEEE
Confidence 4567777775 4444444 3344 899999999998887642 36678999876431 127898887
Q ss_pred cCC
Q 028214 120 NPP 122 (212)
Q Consensus 120 npp 122 (212)
-.+
T Consensus 75 ~~~ 77 (413)
T 3l9w_A 75 AID 77 (413)
T ss_dssp CCS
T ss_pred CCC
Confidence 544
No 435
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=82.59 E-value=8.3 Score=29.21 Aligned_cols=75 Identities=25% Similarity=0.272 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccCcCCC---------
Q 028214 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWRG--------- 112 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~v~~~~~d~~~~~~~~--------- 112 (212)
.++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+... +.++.++..|+.+...-.
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (260)
T 2z1n_A 6 QGKLAVVTAGSSG-LGFASALELARNGA-RLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDL 83 (260)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHT
T ss_pred CCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHh
Confidence 5678888886544 44444 44455 8999999987766655544432 226788899987643210
Q ss_pred -cccEEEEcCCCC
Q 028214 113 -HVDTVVMNPPFG 124 (212)
Q Consensus 113 -~~D~i~~nppy~ 124 (212)
..|+++.|....
T Consensus 84 ~gid~lv~~Ag~~ 96 (260)
T 2z1n_A 84 GGADILVYSTGGP 96 (260)
T ss_dssp TCCSEEEECCCCC
T ss_pred cCCCEEEECCCCC
Confidence 279999887653
No 436
>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*
Probab=82.56 E-value=5.8 Score=29.96 Aligned_cols=75 Identities=24% Similarity=0.238 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcChHHHHHH----H-cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----L-LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~-~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
+++++|-.| |+|.++..++ + .|. +|+.++.++...+.+.+.+...+.++.++..|+.+...-
T Consensus 3 ~~k~vlITG-asggIG~~~a~~L~~~~g~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 80 (276)
T 1wma_A 3 GIHVALVTG-GNKGIGLAIVRDLCRLFSG-DVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY 80 (276)
T ss_dssp CCCEEEESS-CSSHHHHHHHHHHHHHSSS-EEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCcHHHHHHHHHHHHhcCC-eEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhc
Confidence 456777666 5565555554 3 444 899999998777766666655455788899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 81 g~id~li~~Ag~~ 93 (276)
T 1wma_A 81 GGLDVLVNNAGIA 93 (276)
T ss_dssp SSEEEEEECCCCC
T ss_pred CCCCEEEECCccc
Confidence 1589999876543
No 437
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=82.52 E-value=5.7 Score=30.52 Aligned_cols=70 Identities=13% Similarity=0.132 Sum_probs=48.0
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------Cc
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------GH 113 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------~~ 113 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+ +.++.+++.|+.+...- ..
T Consensus 28 l~~k~vlVTGas~GIG~aia~~l~~~G~-~Vi~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~ 103 (281)
T 3ppi_A 28 FEGASAIVSGGAGGLGEATVRRLHADGL-GVVIADLAAEKGKALADEL---GNRAEFVSTNVTSEDSVLAAIEAANQLGR 103 (281)
T ss_dssp GTTEEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHTTSSE
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHh---CCceEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 367788888866553 3444444555 8999999987776665554 33688999998764321 16
Q ss_pred ccEEEEc
Q 028214 114 VDTVVMN 120 (212)
Q Consensus 114 ~D~i~~n 120 (212)
.|+++.|
T Consensus 104 id~lv~~ 110 (281)
T 3ppi_A 104 LRYAVVA 110 (281)
T ss_dssp EEEEEEC
T ss_pred CCeEEEc
Confidence 7888887
No 438
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=82.51 E-value=5.6 Score=30.45 Aligned_cols=75 Identities=12% Similarity=0.055 Sum_probs=49.0
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeC-ChHHHHHHHHHHhhc-CCceEEEEcccccC----cCC------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADL-ELDIDFVQCDIRNL----EWR------ 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~-~~~~~~~a~~~~~~~-~~~v~~~~~d~~~~----~~~------ 111 (212)
.++++|-.|++ |.++..++ +.|. +|+.++. ++...+.+.+.+... +.++.++..|+.+. ..-
T Consensus 10 ~~k~~lVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~ 87 (276)
T 1mxh_A 10 ECPAAVITGGA-RRIGHSIAVRLHQQGF-RVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDC 87 (276)
T ss_dssp -CCEEEETTCS-SHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-cHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHH
Confidence 56778876655 55555444 4454 8999999 887776665555433 44788899999876 211
Q ss_pred -----CcccEEEEcCCCC
Q 028214 112 -----GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -----~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 88 ~~~~~g~id~lv~nAg~~ 105 (276)
T 1mxh_A 88 SFRAFGRCDVLVNNASAY 105 (276)
T ss_dssp HHHHHSCCCEEEECCCCC
T ss_pred HHHhcCCCCEEEECCCCC
Confidence 1579999887543
No 439
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=82.47 E-value=3.6 Score=33.35 Aligned_cols=45 Identities=22% Similarity=0.225 Sum_probs=33.7
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHcCCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |...+.+++....+|++++.+++..+.+++
T Consensus 191 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~~ 236 (369)
T 1uuf_A 191 QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA 236 (369)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH
Confidence 445789999999874 556666665433379999999988888765
No 440
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=82.41 E-value=6.5 Score=30.33 Aligned_cols=76 Identities=21% Similarity=0.229 Sum_probs=50.5
Q ss_pred CCCEEEEEcCCcChHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Cc
Q 028214 48 SNKVVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GH 113 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~ 113 (212)
.++++|-.|++ |.++..+++. ...+|+.++.++...+.+.+.++..+.++.++..|+.+...- ..
T Consensus 43 ~~k~vlITGas-ggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~ 121 (285)
T 2c07_A 43 ENKVALVTGAG-RGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKN 121 (285)
T ss_dssp SSCEEEEESTT-SHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSC
T ss_pred CCCEEEEECCC-cHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 46788877754 5555555532 234888899887777666665555455788899998764321 15
Q ss_pred ccEEEEcCCCC
Q 028214 114 VDTVVMNPPFG 124 (212)
Q Consensus 114 ~D~i~~nppy~ 124 (212)
.|+++.|.-..
T Consensus 122 id~li~~Ag~~ 132 (285)
T 2c07_A 122 VDILVNNAGIT 132 (285)
T ss_dssp CCEEEECCCCC
T ss_pred CCEEEECCCCC
Confidence 79999887654
No 441
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=82.17 E-value=2.9 Score=33.64 Aligned_cols=46 Identities=28% Similarity=0.312 Sum_probs=35.3
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~ 90 (212)
...++++||-.|+|. |..++.+++. |...|+++|.+++..+.+++.
T Consensus 176 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 223 (363)
T 3m6i_A 176 GVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFAKEI 223 (363)
T ss_dssp TCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHh
Confidence 456788999998854 5566666654 565699999999999998876
No 442
>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2
Probab=81.84 E-value=7.2 Score=29.57 Aligned_cols=76 Identities=22% Similarity=0.198 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCcChHHHHHHH----cCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGTLGAAATL----LGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
.+++++|=.| |+|.++..+++ .|. +|++++. ++...+...+.++..+.++.++.+|+.+...-
T Consensus 19 ~~~k~vlItG-asggiG~~la~~l~~~G~-~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 96 (274)
T 1ja9_A 19 LAGKVALTTG-AGRGIGRGIAIELGRRGA-SVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSH 96 (274)
T ss_dssp TTTCEEEETT-TTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeC-CCchHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 3567888777 45665555553 354 8999998 77766666555555455788899998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|....
T Consensus 97 ~~~~d~vi~~Ag~~ 110 (274)
T 1ja9_A 97 FGGLDFVMSNSGME 110 (274)
T ss_dssp HSCEEEEECCCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 1579999876554
No 443
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=81.84 E-value=12 Score=26.99 Aligned_cols=65 Identities=23% Similarity=0.269 Sum_probs=44.0
Q ss_pred EEEEEcCCcChHHHHHHH----cCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC--cccEEEEcCCCC
Q 028214 51 VVADFGCGCGTLGAAATL----LGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFG 124 (212)
Q Consensus 51 ~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~D~i~~nppy~ 124 (212)
+||-.| |+|.++..+++ .| .+|++++-++...+... .+++++.+|+.+..... .+|+|+.+-...
T Consensus 2 kvlVtG-atG~iG~~l~~~L~~~g-~~V~~~~R~~~~~~~~~-------~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIG-ATGRAGSRILEEAKNRG-HEVTAIVRNAGKITQTH-------KDINILQKDIFDLTLSDLSDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTT-CEEEEEESCSHHHHHHC-------SSSEEEECCGGGCCHHHHTTCSEEEECCCSS
T ss_pred eEEEEc-CCchhHHHHHHHHHhCC-CEEEEEEcCchhhhhcc-------CCCeEEeccccChhhhhhcCCCEEEECCcCC
Confidence 566666 56666665553 34 48999999876544322 25889999998765421 789999877654
No 444
>4f3n_A Uncharacterized ACR, COG1565 superfamily; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.75A {Burkholderia thailandensis} PDB: 4g67_A*
Probab=81.81 E-value=2.8 Score=35.07 Aligned_cols=68 Identities=21% Similarity=0.326 Sum_probs=42.7
Q ss_pred cccCCCChHHHHH-------HHHHHHhhcCCCCCCEEEEEcCCcChHHHHHHHc----C--CCeEEEEeCChHHHHHHHH
Q 028214 23 LEQYPTGPHIASR-------MLYTAENSFGDVSNKVVADFGCGCGTLGAAATLL----G--ADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 23 ~~~~~~~~~~~~~-------~l~~~~~~~~~~~~~~vlDlg~G~G~~~~~~~~~----~--~~~v~~~D~~~~~~~~a~~ 89 (212)
..+|.|.+++..- -+...+... ..-.|+|+|+|+|.+..-+.+. + ..+++.+|+|+...+.=++
T Consensus 108 ~GDFiTAPeiS~~FGe~la~~~~~~~~~~---g~~~ivE~GaG~GtLa~DiL~~l~~~~~~~~~y~iVE~Sp~Lr~~Q~~ 184 (432)
T 4f3n_A 108 GSDFVTAPELSPLFAQTLARPVAQALDAS---GTRRVMEFGAGTGKLAAGLLTALAALGVELDEYAIVDLSGELRARQRE 184 (432)
T ss_dssp --CCSSCGGGHHHHHHHHHHHHHHHHHHH---TCCEEEEESCTTSHHHHHHHHHHHHTTCCCSEEEEECTTSSSHHHHHH
T ss_pred CCCccCchhhhHHHHHHHHHHHHHHHHhc---CCCeEEEeCCCccHHHHHHHHHHHhcCCCCceEEEEEcCHHHHHHHHH
Confidence 4578888766321 112222221 2469999999999976666532 2 3479999999987766666
Q ss_pred HHhh
Q 028214 90 NAAD 93 (212)
Q Consensus 90 ~~~~ 93 (212)
++..
T Consensus 185 ~L~~ 188 (432)
T 4f3n_A 185 TLGA 188 (432)
T ss_dssp HHHH
T ss_pred HHhc
Confidence 6543
No 445
>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2
Probab=81.80 E-value=6.8 Score=31.11 Aligned_cols=60 Identities=18% Similarity=0.067 Sum_probs=41.1
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEe-CChHHHHHHHHHHh-hcCCceEEEEcccccCc
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAA-DLELDIDFVQCDIRNLE 109 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D-~~~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~ 109 (212)
.++++|-.|++.| ++..++ +.|. +|+.++ .++...+.+.+.+. ..+.++.++..|+.+..
T Consensus 45 ~~k~~lVTGas~G-IG~aia~~La~~G~-~Vv~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~d~~ 110 (328)
T 2qhx_A 45 TVPVALVTGAAKR-LGRSIAEGLHAEGY-AVCLHYHRSAAEANALSATLNARRPNSAITVQADLSNVA 110 (328)
T ss_dssp CCCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSC
T ss_pred CCCEEEEECCCCH-HHHHHHHHHHHCCC-EEEEEcCCCHHHHHHHHHHHHhhcCCeEEEEEeeCCCch
Confidence 5678887775544 444444 4455 899999 88877776665554 33447889999998765
No 446
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=81.79 E-value=5.2 Score=31.16 Aligned_cols=77 Identities=12% Similarity=0.112 Sum_probs=50.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC--hHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID--SDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~--~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.+ +...+...+..+..+.++.++..|+.+...-
T Consensus 47 l~~k~vlVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 125 (294)
T 3r3s_A 47 LKDRKALVTGGDSGIGRAAAIAYAREGA-DVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREA 125 (294)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 367889988866553 3344444555 89998886 3345555555555555788899998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 126 ~g~iD~lv~nAg~~ 139 (294)
T 3r3s_A 126 LGGLDILALVAGKQ 139 (294)
T ss_dssp HTCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCc
Confidence 1689999887653
No 447
>2g1p_A DNA adenine methylase; DAM methylation, GATC recognition, base flipping, bacterial factor, transferase-DNA complex; HET: DNA SAH; 1.89A {Escherichia coli} PDB: 2ore_D*
Probab=81.72 E-value=1.5 Score=34.41 Aligned_cols=41 Identities=20% Similarity=0.210 Sum_probs=29.3
Q ss_pred hHHHHHHHHHHhhcCCceEEEEcccccCcCCC-cccEEEEcCCCCC
Q 028214 81 SDSLELASENAADLELDIDFVQCDIRNLEWRG-HVDTVVMNPPFGT 125 (212)
Q Consensus 81 ~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-~~D~i~~nppy~~ 125 (212)
.+.+..+.+.++ ++++.++|+.+..... .=|+|++||||..
T Consensus 145 ~~~l~~~~~~l~----~v~i~~~Df~~~i~~~~~~~fvY~DPPY~~ 186 (278)
T 2g1p_A 145 EAELYHFAEKAQ----NAFFYCESYADSMARADDSSVVYCDPPYAP 186 (278)
T ss_dssp HHHHHHHHHHGG----GEEEEECCHHHHHTTCCTTEEEEECCSCCC
T ss_pred HHHHHHHHHHcC----CcEEEeCCHHHHHHhcCCCCEEEeCCcccc
Confidence 445555545443 6999999998865432 5589999999964
No 448
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=81.69 E-value=6.1 Score=30.57 Aligned_cols=75 Identities=19% Similarity=0.196 Sum_probs=50.5
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-------Cccc
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-------GHVD 115 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-------~~~D 115 (212)
..+++++|-.|++.|+ +...+++.|. +|+.++.++...+.+.+.+ +.++.++..|+.+...- ...|
T Consensus 13 ~l~gk~vlVTGas~gIG~~~a~~L~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dl~d~~~v~~~~~~~~~iD 88 (291)
T 3rd5_A 13 SFAQRTVVITGANSGLGAVTARELARRGA-TVIMAVRDTRKGEAAARTM---AGQVEVRELDLQDLSSVRRFADGVSGAD 88 (291)
T ss_dssp CCTTCEEEEECCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHTTS---SSEEEEEECCTTCHHHHHHHHHTCCCEE
T ss_pred CCCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHh---cCCeeEEEcCCCCHHHHHHHHHhcCCCC
Confidence 4578889988866553 3334444455 8999999987766655443 33688999998764321 1579
Q ss_pred EEEEcCCCC
Q 028214 116 TVVMNPPFG 124 (212)
Q Consensus 116 ~i~~nppy~ 124 (212)
+++.|.-..
T Consensus 89 ~lv~nAg~~ 97 (291)
T 3rd5_A 89 VLINNAGIM 97 (291)
T ss_dssp EEEECCCCC
T ss_pred EEEECCcCC
Confidence 999886553
No 449
>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*
Probab=81.55 E-value=5.5 Score=32.21 Aligned_cols=46 Identities=33% Similarity=0.338 Sum_probs=34.8
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~ 90 (212)
...++++||-.|+|. |..++.+++. |..+|+++|.++...+.+++.
T Consensus 179 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~l 226 (370)
T 4ej6_A 179 GIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLAEEV 226 (370)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHc
Confidence 456789999999864 5566666654 566899999999888887663
No 450
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=81.45 E-value=6.1 Score=29.82 Aligned_cols=76 Identities=18% Similarity=0.148 Sum_probs=46.9
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcC-------CceEEEEcccccCcCCC---
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLE-------LDIDFVQCDIRNLEWRG--- 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~-------~~v~~~~~d~~~~~~~~--- 112 (212)
..++++|=.|++ |.++..++ +.|. +|+.++.++...+...+.+...+ .++.++..|+.+...-.
T Consensus 5 ~~~k~vlITGas-ggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~ 82 (264)
T 2pd6_A 5 LRSALALVTGAG-SGIGRAVSVRLAGEGA-TVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLL 82 (264)
T ss_dssp CTTCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHH
T ss_pred cCCCEEEEECCC-ChHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHH
Confidence 356788888755 44444444 4454 89999999877665554443322 25788899987643211
Q ss_pred --------cc-cEEEEcCCCC
Q 028214 113 --------HV-DTVVMNPPFG 124 (212)
Q Consensus 113 --------~~-D~i~~nppy~ 124 (212)
.. |+++.|.-..
T Consensus 83 ~~~~~~~g~i~d~vi~~Ag~~ 103 (264)
T 2pd6_A 83 EQVQACFSRPPSVVVSCAGIT 103 (264)
T ss_dssp HHHHHHHSSCCSEEEECCCCC
T ss_pred HHHHHHhCCCCeEEEECCCcC
Confidence 23 9999887654
No 451
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=81.37 E-value=6.7 Score=30.18 Aligned_cols=76 Identities=16% Similarity=0.115 Sum_probs=50.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHh-hcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAA-DLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~-~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.+....+.+...+. ..+.++.++..|+.+...-
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 103 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGC-HTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEF 103 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTC-EEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc
Confidence 467889988876553 3333444455 89999999876655544443 2344788999998875321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 104 g~id~lv~nAg~ 115 (277)
T 4fc7_A 104 GRIDILINCAAG 115 (277)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCcC
Confidence 168999988754
No 452
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=81.36 E-value=7.3 Score=29.12 Aligned_cols=77 Identities=18% Similarity=0.223 Sum_probs=50.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC-ceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLEL-DIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~-~v~~~~~d~~~~~~~----------- 111 (212)
.+++++|-.|++.|. +...+++.|. +|+.++.++...+.+.+.+...+. ++.++..|+......
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~ 90 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGA-SVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEH 90 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCC-EEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHH
Confidence 467888888865543 2333444455 899999999888877777766543 667777776221111
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 91 ~~g~id~lv~nAg~~ 105 (247)
T 3i1j_A 91 EFGRLDGLLHNASII 105 (247)
T ss_dssp HHSCCSEEEECCCCC
T ss_pred hCCCCCEEEECCccC
Confidence 1689999887653
No 453
>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*
Probab=80.94 E-value=5.2 Score=30.31 Aligned_cols=76 Identities=13% Similarity=0.126 Sum_probs=48.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHH---cCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccCcCC-------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATL---LGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~---~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~v~~~~~d~~~~~~~------- 111 (212)
.+++++|-.|++.|+ +...+++ .|. +|+.++.++...+.+.+.+... +.++.++..|+.+...-
T Consensus 4 l~~k~~lVTGas~gIG~~ia~~l~~~~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 82 (259)
T 1oaa_A 4 LGCAVCVLTGASRGFGRALAPQLARLLSPGS-VMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAV 82 (259)
T ss_dssp CBSEEEEESSCSSHHHHHHHHHHHTTBCTTC-EEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCCcEEEEeCCCChHHHHHHHHHHHhhcCCC-eEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHH
Confidence 356778877765553 2333344 344 8999999988777666555443 33688899998764210
Q ss_pred ------Cccc--EEEEcCCC
Q 028214 112 ------GHVD--TVVMNPPF 123 (212)
Q Consensus 112 ------~~~D--~i~~nppy 123 (212)
..+| +++.|.-.
T Consensus 83 ~~~~~~g~~d~~~lvnnAg~ 102 (259)
T 1oaa_A 83 RELPRPEGLQRLLLINNAAT 102 (259)
T ss_dssp HHSCCCTTCCEEEEEECCCC
T ss_pred HhccccccCCccEEEECCcc
Confidence 1467 88887654
No 454
>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*
Probab=80.92 E-value=7.1 Score=29.43 Aligned_cols=75 Identities=20% Similarity=0.151 Sum_probs=49.4
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
+++++|-.|+ +|.++..++ +.|. +|+.++. ++...+...+.+...+.++.++..|+.+...-
T Consensus 6 ~~k~vlITGa-sggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (261)
T 1gee_A 6 EGKVVVITGS-STGLGKSMAIRFATEKA-KVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEF 83 (261)
T ss_dssp TTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCC-CChHHHHHHHHHHHCCC-EEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 5677887775 455555544 3454 8999998 77666655555554444688899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 84 g~id~li~~Ag~~ 96 (261)
T 1gee_A 84 GKLDVMINNAGLE 96 (261)
T ss_dssp SCCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1579999886543
No 455
>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2
Probab=80.85 E-value=7.2 Score=29.06 Aligned_cols=75 Identities=21% Similarity=0.249 Sum_probs=49.6
Q ss_pred CCEEEEEcCCcChHHHHHHH----cCCC------eEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-------
Q 028214 49 NKVVADFGCGCGTLGAAATL----LGAD------QVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR------- 111 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~----~~~~------~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~------- 111 (212)
++++|=.| |+|.++..+++ .|.. +|+.++.++...+.....+...+.++.++..|+.+...-
T Consensus 2 ~k~vlITG-asggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~ 80 (244)
T 2bd0_A 2 KHILLITG-AGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHI 80 (244)
T ss_dssp CEEEEEET-TTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHH
T ss_pred CCEEEEEC-CCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHH
Confidence 35677666 45555555543 3443 799999998777766665554444788999998764321
Q ss_pred ----CcccEEEEcCCCC
Q 028214 112 ----GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ----~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 81 ~~~~g~id~li~~Ag~~ 97 (244)
T 2bd0_A 81 VERYGHIDCLVNNAGVG 97 (244)
T ss_dssp HHHTSCCSEEEECCCCC
T ss_pred HHhCCCCCEEEEcCCcC
Confidence 1589999876543
No 456
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=80.73 E-value=8.4 Score=29.71 Aligned_cols=79 Identities=16% Similarity=0.193 Sum_probs=52.4
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeC-ChHHHHHHHHHHhhc-CCceEEEEcccccCcCC---------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDI-DSDSLELASENAADL-ELDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~-~~~~~~~a~~~~~~~-~~~v~~~~~d~~~~~~~--------- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++. ++...+...+.+... +.++.++..|+.+...-
T Consensus 22 ~l~~k~~lVTGas~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 100 (281)
T 3v2h_A 22 SMMTKTAVITGSTSGIGLAIARTLAKAGA-NIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVAD 100 (281)
T ss_dssp CCTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHH
Confidence 3467889998876654 3444445555 8999998 666666655555443 33788899998764321
Q ss_pred --CcccEEEEcCCCCC
Q 028214 112 --GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 --~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 101 ~~g~iD~lv~nAg~~~ 116 (281)
T 3v2h_A 101 RFGGADILVNNAGVQF 116 (281)
T ss_dssp HTSSCSEEEECCCCCC
T ss_pred HCCCCCEEEECCCCCC
Confidence 16899998876543
No 457
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=80.72 E-value=12 Score=29.06 Aligned_cols=76 Identities=18% Similarity=0.159 Sum_probs=51.8
Q ss_pred CCCCEEEEEcCCcC--h---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCG--T---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G--~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
..++++|-.|++.| + +...+++.|. +|+.++.++...+.+++.....+ ++.++..|+.+...-
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGA-ELAFTYQGDALKKRVEPLAEELG-AFVAGHCDVADAASIDAVFETLEKK 106 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTC-EEEEEECSHHHHHHHHHHHHHHT-CEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHHHhcC-CceEEECCCCCHHHHHHHHHHHHHh
Confidence 57889999997733 3 3444555555 89999998766655555544444 578899998865321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 107 ~g~iD~lVnnAG~~ 120 (293)
T 3grk_A 107 WGKLDFLVHAIGFS 120 (293)
T ss_dssp TSCCSEEEECCCCC
T ss_pred cCCCCEEEECCccC
Confidence 1689999887654
No 458
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=80.72 E-value=9.9 Score=29.16 Aligned_cols=78 Identities=17% Similarity=0.152 Sum_probs=52.1
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCC-hHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~-~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
...++++|-.|++.|+ +...+++.|. +|+.++.+ ....+.....++..+.++.++..|+.+...-
T Consensus 28 ~l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~ 106 (271)
T 3v2g_A 28 SLAGKTAFVTGGSRGIGAAIAKRLALEGA-AVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEA 106 (271)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCcHHHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence 3578899999977664 3444455555 78888654 4555555555555555788999998875321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 107 ~g~iD~lvnnAg~~ 120 (271)
T 3v2g_A 107 LGGLDILVNSAGIW 120 (271)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCcEEEECCCCC
Confidence 1689999887654
No 459
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=80.70 E-value=9.5 Score=29.20 Aligned_cols=75 Identities=20% Similarity=0.277 Sum_probs=50.4
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCC--ceEEEEcccccCcCC----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLEL--DIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~--~v~~~~~d~~~~~~~---------- 111 (212)
+++++|-.|++ |.++..++ +.|. +|++++.++...+.....+...+. ++.++.+|+.+...-
T Consensus 31 ~~k~vlVTGas-ggIG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 108 (279)
T 1xg5_A 31 RDRLALVTGAS-GGIGAAVARALVQQGL-KVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQ 108 (279)
T ss_dssp TTCEEEEESTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHh
Confidence 56788888854 55544444 3454 899999998777666655554442 578889998765321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
..+|+++.|..+.
T Consensus 109 ~g~iD~vi~~Ag~~ 122 (279)
T 1xg5_A 109 HSGVDICINNAGLA 122 (279)
T ss_dssp HCCCSEEEECCCCC
T ss_pred CCCCCEEEECCCCC
Confidence 1589999887654
No 460
>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*
Probab=80.67 E-value=8.2 Score=28.99 Aligned_cols=76 Identities=18% Similarity=0.181 Sum_probs=49.3
Q ss_pred CCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeC-ChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDI-DSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~-~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++|-.|++.| ++..+ ++.|. +|+.++. ++...+...+.++..+.++.+++.|+.+...-
T Consensus 3 ~~k~~lVTGas~g-IG~~ia~~l~~~G~-~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 80 (246)
T 3osu_A 3 MTKSALVTGASRG-IGRSIALQLAEEGY-NVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQF 80 (246)
T ss_dssp CSCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCh-HHHHHHHHHHHCCC-EEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc
Confidence 4567777775544 44444 44455 7888876 55666666666666565788999998764321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 81 g~id~lv~nAg~~~ 94 (246)
T 3osu_A 81 GSLDVLVNNAGITR 94 (246)
T ss_dssp SCCCEEEECCCCCC
T ss_pred CCCCEEEECCCCCC
Confidence 16899998876543
No 461
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=80.66 E-value=3.4 Score=33.03 Aligned_cols=45 Identities=33% Similarity=0.423 Sum_probs=34.7
Q ss_pred CCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHHH
Q 028214 46 DVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 46 ~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~ 90 (212)
..++++|+-.|+|. |..++.+++. +..+|+++|.+++..+.+++.
T Consensus 169 ~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~~l 215 (345)
T 3jv7_A 169 LGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALAREV 215 (345)
T ss_dssp CCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHHHT
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHc
Confidence 45788999999864 5666667654 567999999999988888653
No 462
>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*
Probab=80.62 E-value=8.2 Score=28.73 Aligned_cols=76 Identities=20% Similarity=0.215 Sum_probs=49.7
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhh-cCCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAAD-LELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~-~~~~v~~~~~d~~~~~~~---------- 111 (212)
.+++++|-.|+ +|.++..++ +.|. +|+.++.++...+.....+.. .+.++.++..|+.+...-
T Consensus 5 ~~~~~vlVtGa-sggiG~~la~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 82 (248)
T 2pnf_A 5 LQGKVSLVTGS-TRGIGRAIAEKLASAGS-TVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNL 82 (248)
T ss_dssp CTTCEEEETTC-SSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECC-CchHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHh
Confidence 35677887775 555555554 3454 899999998777665554433 344688899998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|....
T Consensus 83 ~~~~d~vi~~Ag~~ 96 (248)
T 2pnf_A 83 VDGIDILVNNAGIT 96 (248)
T ss_dssp SSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 1589999887654
No 463
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=80.59 E-value=5.3 Score=29.24 Aligned_cols=67 Identities=19% Similarity=0.130 Sum_probs=44.6
Q ss_pred EEEEEcCCcChHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC--cccEEEEcCCCC
Q 028214 51 VVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG--HVDTVVMNPPFG 124 (212)
Q Consensus 51 ~vlDlg~G~G~~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~--~~D~i~~nppy~ 124 (212)
+||=.| |+|.++..+++. ...+|++++.++....... ..+++++.+|+.+..... .+|+|+.+....
T Consensus 2 kilVtG-atG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~------~~~~~~~~~D~~d~~~~~~~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLG-ATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL------GATVATLVKEPLVLTEADLDSVDAVVDALSVP 73 (224)
T ss_dssp EEEEET-TTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT------CTTSEEEECCGGGCCHHHHTTCSEEEECCCCC
T ss_pred EEEEEc-CCCHHHHHHHHHHHHCCCEEEEEEeccccccccc------CCCceEEecccccccHhhcccCCEEEECCccC
Confidence 566666 567766665543 2348999999876544221 126889999998765421 789999877654
No 464
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=80.53 E-value=5.5 Score=31.18 Aligned_cols=77 Identities=21% Similarity=0.269 Sum_probs=42.5
Q ss_pred CCCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-CcccEEEEcC
Q 028214 46 DVSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-GHVDTVVMNP 121 (212)
Q Consensus 46 ~~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-~~~D~i~~np 121 (212)
...+++++=+|+| |. ....++..|..+|+.++.+++..+...+.+......+.+...+..++... ..+|+|+.--
T Consensus 124 ~l~~k~vlVlGaG-G~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l~~~l~~~DiVInaT 202 (283)
T 3jyo_A 124 NAKLDSVVQVGAG-GVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGIEDVIAAADGVVNAT 202 (283)
T ss_dssp TCCCSEEEEECCS-HHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTHHHHHHHSSEEEECS
T ss_pred CcCCCEEEEECCc-HHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHHHHHHhcCCEEEECC
Confidence 4578899999987 32 23334455776899999987766555444433211122222222222111 1578888655
Q ss_pred CC
Q 028214 122 PF 123 (212)
Q Consensus 122 py 123 (212)
|.
T Consensus 203 p~ 204 (283)
T 3jyo_A 203 PM 204 (283)
T ss_dssp ST
T ss_pred CC
Confidence 54
No 465
>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...
Probab=80.41 E-value=6.2 Score=30.49 Aligned_cols=76 Identities=14% Similarity=0.082 Sum_probs=48.8
Q ss_pred CCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCCh-HHHHHHHHHHh-hcCCceEEEEccccc----CcCC-------
Q 028214 48 SNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDS-DSLELASENAA-DLELDIDFVQCDIRN----LEWR------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~-~~~~~a~~~~~-~~~~~v~~~~~d~~~----~~~~------- 111 (212)
.++++|-.|++.|+ +...+++.|. +|+.++.++ ...+.+.+.+. ..+.++.++..|+.+ ...-
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~-~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~ 100 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGY-RVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSC 100 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTC-EEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCC-eEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHH
Confidence 56788887765543 2333444455 899999987 66655554443 334478889999987 2210
Q ss_pred ----CcccEEEEcCCCC
Q 028214 112 ----GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ----~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 101 ~~~~g~iD~lvnnAG~~ 117 (288)
T 2x9g_A 101 FRAFGRCDVLVNNASAF 117 (288)
T ss_dssp HHHHSCCCEEEECCCCC
T ss_pred HHhcCCCCEEEECCCCC
Confidence 1589999887543
No 466
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=80.29 E-value=5.5 Score=30.63 Aligned_cols=77 Identities=22% Similarity=0.191 Sum_probs=50.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHH-------HHHHHHHHhhcCCceEEEEcccccCcCC-----
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDS-------LELASENAADLELDIDFVQCDIRNLEWR----- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~-------~~~a~~~~~~~~~~v~~~~~d~~~~~~~----- 111 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.+... ++.....+...+.++.++..|+.+...-
T Consensus 4 l~~k~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~ 82 (274)
T 3e03_A 4 LSGKTLFITGASRGIGLAIALRAARDGA-NVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVA 82 (274)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHH
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCC-EEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHH
Confidence 467889988877664 3444555565 89999987542 3444444444455788999998865321
Q ss_pred ------CcccEEEEcCCCC
Q 028214 112 ------GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ------~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 83 ~~~~~~g~iD~lvnnAG~~ 101 (274)
T 3e03_A 83 ATVDTFGGIDILVNNASAI 101 (274)
T ss_dssp HHHHHHSCCCEEEECCCCC
T ss_pred HHHHHcCCCCEEEECCCcc
Confidence 1689999887654
No 467
>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}
Probab=80.26 E-value=8.6 Score=30.15 Aligned_cols=68 Identities=15% Similarity=0.056 Sum_probs=43.2
Q ss_pred hhcCCCCCCEEEEEcCC-cChHHHHHHHc-CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCCcccEEEE
Q 028214 42 NSFGDVSNKVVADFGCG-CGTLGAAATLL-GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRGHVDTVVM 119 (212)
Q Consensus 42 ~~~~~~~~~~vlDlg~G-~G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~D~i~~ 119 (212)
......++++||-.|+| .|...+.+++. |. +|++++ +++..+.+++. | .+.+..|...+ ...+|+|+-
T Consensus 136 ~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga-~Vi~~~-~~~~~~~~~~l----G--a~~v~~d~~~v--~~g~Dvv~d 205 (315)
T 3goh_A 136 EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGY-VVDLVS-ASLSQALAAKR----G--VRHLYREPSQV--TQKYFAIFD 205 (315)
T ss_dssp TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTC-EEEEEC-SSCCHHHHHHH----T--EEEEESSGGGC--CSCEEEEEC
T ss_pred hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEE-ChhhHHHHHHc----C--CCEEEcCHHHh--CCCccEEEE
Confidence 33345578999999995 35566666654 56 999999 88888887653 3 22221242222 337888873
No 468
>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*
Probab=80.19 E-value=5.4 Score=30.27 Aligned_cols=75 Identities=20% Similarity=0.280 Sum_probs=48.0
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHH-HHHHHHHHhhc-CCceEEEEcccccCcCC----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDS-LELASENAADL-ELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~-~~~a~~~~~~~-~~~v~~~~~d~~~~~~~---------- 111 (212)
+++++|-.|++.| ++..++ +.|. +|+.++.++.. .+.+.+.+... +.++.++..|+.+...-
T Consensus 3 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 80 (260)
T 1x1t_A 3 KGKVAVVTGSTSG-IGLGIATALAAQGA-DIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQ 80 (260)
T ss_dssp TTCEEEETTCSSH-HHHHHHHHHHHTTC-EEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcH-HHHHHHHHHHHcCC-EEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHh
Confidence 5677887775544 444444 4455 89999988766 55554444332 44688888998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 81 ~g~iD~lv~~Ag~~ 94 (260)
T 1x1t_A 81 MGRIDILVNNAGIQ 94 (260)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 1589999887543
No 469
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=80.02 E-value=5.1 Score=32.05 Aligned_cols=44 Identities=27% Similarity=0.311 Sum_probs=32.9
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |...+.+++. |. +|+++|.+++..+.+++
T Consensus 165 ~~~~g~~VlV~GaG~vG~~a~qla~~~Ga-~Vi~~~~~~~~~~~~~~ 210 (352)
T 1e3j_A 165 GVQLGTTVLVIGAGPIGLVSVLAAKAYGA-FVVCTARSPRRLEVAKN 210 (352)
T ss_dssp TCCTTCEEEEECCSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCC-EEEEEcCCHHHHHHHHH
Confidence 445789999999763 5556666654 55 69999999988888764
No 470
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=79.77 E-value=9.2 Score=28.81 Aligned_cols=75 Identities=23% Similarity=0.226 Sum_probs=50.5
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
.+++++|-.|++.|+ +...+++.|. +|+.++.++...+...+.+.. +..++..|+.+...- .
T Consensus 7 l~gk~~lVTGas~gIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~Dv~d~~~v~~~~~~~~~~~g 82 (248)
T 3op4_A 7 LEGKVALVTGASRGIGKAIAELLAERGA-KVIGTATSESGAQAISDYLGD---NGKGMALNVTNPESIEAVLKAITDEFG 82 (248)
T ss_dssp CTTCEEEESSCSSHHHHHHHHHHHHTTC-EEEEEESSHHHHHHHHHHHGG---GEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHhcc---cceEEEEeCCCHHHHHHHHHHHHHHcC
Confidence 467888888866553 3344444555 899999998877666555433 467888888765321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 83 ~iD~lv~nAg~~~ 95 (248)
T 3op4_A 83 GVDILVNNAGITR 95 (248)
T ss_dssp CCSEEEECCCCCC
T ss_pred CCCEEEECCCCCC
Confidence 6899998876543
No 471
>3tos_A CALS11; methyltransferase, calicheamicin, structural genomic protein structure initiative, PSI, natPro; HET: MSE SAH GLU; 1.55A {Micromonospora echinospora} PDB: 4gf5_A*
Probab=79.75 E-value=19 Score=27.76 Aligned_cols=99 Identities=14% Similarity=0.143 Sum_probs=58.7
Q ss_pred CCEEEEEcCCcChHHHHHHHc--------CCCeEEEEeC-----Ch----------------------HHHHHH---HHH
Q 028214 49 NKVVADFGCGCGTLGAAATLL--------GADQVIAIDI-----DS----------------------DSLELA---SEN 90 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~~~--------~~~~v~~~D~-----~~----------------------~~~~~a---~~~ 90 (212)
+..++|+|+-.|..++.++.. ...+|++.|. .+ +.++.. ..+
T Consensus 70 pG~ivE~GV~rG~S~~~~a~~~~~l~~~~~~r~v~~fDTFeG~P~~~~~D~~~~~~~~G~~~~~~~~~~~l~~~l~~~~~ 149 (257)
T 3tos_A 70 PGVIMEFGVRFGRHLGTFAALRGVYEPYNPLRRIVGFDTFTGFPDVNDVDRVGPTAYQGRFAVPGGYPAYLKEVLDAHEC 149 (257)
T ss_dssp CSEEEEECCTTCHHHHHHHHHHHHHCTTCTTCCEEEEECSSCCCSCCGGGTTSTTCSTTTTCCCTTHHHHHHHHHHHHHT
T ss_pred CCeEEEEecccCHHHHHHHHHHHHhcccCCCCEEEEEECCCCCCCCccccccccccccCcccccchhHHHHHHHHHHHhh
Confidence 447999999999987776542 2468999992 21 001111 112
Q ss_pred HhhcCC---ceEEEEcccccCcCC-------CcccEEEEcCCCCCCCCCchHHHHHHHHhhcC-ceEEEEec
Q 028214 91 AADLEL---DIDFVQCDIRNLEWR-------GHVDTVVMNPPFGTRKKGVDMDFLSMALKVAS-QAVYSLHK 151 (212)
Q Consensus 91 ~~~~~~---~v~~~~~d~~~~~~~-------~~~D~i~~nppy~~~~~~~~~~~l~~~~~~~~-~~~~~~~~ 151 (212)
.+..+. +++++.|++.+..+. .++|++..|.-. .......++.+..... +++.+..+
T Consensus 150 ~~~~g~~~~~i~li~G~~~dTL~~~l~~~~~~~~dlv~ID~D~----Y~~t~~~le~~~p~l~~GGvIv~DD 217 (257)
T 3tos_A 150 SDFFGHVTQRSVLVEGDVRETVPRYLAENPQTVIALAYFDLDL----YEPTKAVLEAIRPYLTKGSIVAFDE 217 (257)
T ss_dssp TSTTTTSCCSEEEEESCHHHHHHHHHHHCTTCCEEEEEECCCC----HHHHHHHHHHHGGGEEEEEEEEESS
T ss_pred hhhcCCCCCcEEEEEecHHHHHHHHHHhCCCCceEEEEEcCcc----cchHHHHHHHHHHHhCCCcEEEEcC
Confidence 222332 799999999875422 269999998631 1233445666665544 34444444
No 472
>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=79.72 E-value=6.6 Score=30.07 Aligned_cols=74 Identities=23% Similarity=0.266 Sum_probs=47.6
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHH---hhcCCceEEEEcccccCcCC---------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA---ADLELDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~---~~~~~~v~~~~~d~~~~~~~--------- 111 (212)
.++++|-.|++ |.++..++ +.|. +|+.++.++...+.+.+.+ ...+.++.++..|+.+...-
T Consensus 5 ~~k~vlVTGas-~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~ 82 (278)
T 1spx_A 5 AEKVAIITGSS-NGIGRATAVLFAREGA-KVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLG 82 (278)
T ss_dssp TTCEEEETTTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHH
Confidence 56778877755 44444444 4455 8999999987776665554 21222688899998764321
Q ss_pred --CcccEEEEcCCC
Q 028214 112 --GHVDTVVMNPPF 123 (212)
Q Consensus 112 --~~~D~i~~nppy 123 (212)
...|+++.|.-.
T Consensus 83 ~~g~id~lv~~Ag~ 96 (278)
T 1spx_A 83 KFGKLDILVNNAGA 96 (278)
T ss_dssp HHSCCCEEEECCC-
T ss_pred HcCCCCEEEECCCC
Confidence 158999988654
No 473
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=79.72 E-value=12 Score=28.40 Aligned_cols=74 Identities=24% Similarity=0.209 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.++...+.....+ +.++.+++.|+.+...- .
T Consensus 6 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 81 (259)
T 4e6p_A 6 LEGKSALITGSARGIGRAFAEAYVREGA-TVAIADIDIERARQAAAEI---GPAAYAVQMDVTRQDSIDAAIAATVEHAG 81 (259)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTCHHHHHHHHHHHHHHSS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCCceEEEeeCCCHHHHHHHHHHHHHHcC
Confidence 467889988866553 3334444455 8999999987766555444 23678899998764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 82 ~id~lv~~Ag~~ 93 (259)
T 4e6p_A 82 GLDILVNNAALF 93 (259)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 689999887654
No 474
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=79.71 E-value=2.9 Score=33.83 Aligned_cols=45 Identities=24% Similarity=0.313 Sum_probs=33.4
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |...+.+++. |..+|+++|.+++..+.+++
T Consensus 188 ~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~~ 234 (373)
T 1p0f_A 188 KVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE 234 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHHH
Confidence 445788999999763 4556666643 55589999999988888764
No 475
>3h8v_A Ubiquitin-like modifier-activating enzyme 5; rossman fold, ATP-binding, UBL conjugation pathway, transfer structural genomics consortium, SGC; HET: ATP; 2.00A {Homo sapiens} PDB: 3guc_A*
Probab=79.52 E-value=6 Score=31.22 Aligned_cols=61 Identities=18% Similarity=0.291 Sum_probs=40.5
Q ss_pred CCCCCEEEEEcCC-cCh-HHHHHHHcCCCeEEEEeCCh------------------HHHHHHHHHHhhcCC--ceEEEEc
Q 028214 46 DVSNKVVADFGCG-CGT-LGAAATLLGADQVIAIDIDS------------------DSLELASENAADLEL--DIDFVQC 103 (212)
Q Consensus 46 ~~~~~~vlDlg~G-~G~-~~~~~~~~~~~~v~~~D~~~------------------~~~~~a~~~~~~~~~--~v~~~~~ 103 (212)
..+..+|+=+||| .|. ++..+++.|..+++.+|-|. .-.+.+++++...+. +++.+..
T Consensus 33 kL~~~~VlVvGaGGlGs~va~~La~aGVG~i~lvD~D~Ve~sNL~Rq~~~~~diG~~Ka~aa~~~L~~iNP~v~v~~~~~ 112 (292)
T 3h8v_A 33 KIRTFAVAIVGVGGVGSVTAEMLTRCGIGKLLLFDYDKVELANMNRLFFQPHQAGLSKVQAAEHTLRNINPDVLFEVHNY 112 (292)
T ss_dssp GGGGCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBC------------CCTTSBHHHHHHHHHHHHCTTSEEEEECC
T ss_pred HHhCCeEEEECcCHHHHHHHHHHHHcCCCEEEEECCCccChhhcccccCChhhcCchHHHHHHHHHHhhCCCcEEEEecc
Confidence 3467899999998 454 45566677888999999764 334556666655433 5666665
Q ss_pred ccc
Q 028214 104 DIR 106 (212)
Q Consensus 104 d~~ 106 (212)
++.
T Consensus 113 ~l~ 115 (292)
T 3h8v_A 113 NIT 115 (292)
T ss_dssp CTT
T ss_pred cCC
Confidence 543
No 476
>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}
Probab=79.52 E-value=8.6 Score=28.70 Aligned_cols=73 Identities=22% Similarity=0.276 Sum_probs=47.2
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHH-hhcCCceEEEEcccccCcCC-----------C
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENA-ADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~-~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
++++|-.|++ |.++..++ +.|. +|+.++.++...+...+.+ ...+.++.++..|+.+...- .
T Consensus 2 ~k~vlItGas-ggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 79 (250)
T 2cfc_A 2 SRVAIVTGAS-SGNGLAIATRFLARGD-RVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFG 79 (250)
T ss_dssp CCEEEEETTT-SHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCEEEEeCCC-chHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhC
Confidence 4577777754 55555444 3454 8999999987766555444 22233688899998764321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 80 ~id~li~~Ag~ 90 (250)
T 2cfc_A 80 AIDVLVNNAGI 90 (250)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 57999988654
No 477
>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*
Probab=79.27 E-value=5.4 Score=29.95 Aligned_cols=74 Identities=20% Similarity=0.161 Sum_probs=48.9
Q ss_pred CCCEEEEEcCCcChHHHHHHH----cCCCeEEEEeCC-hHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAATL----LGADQVIAIDID-SDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~----~~~~~v~~~D~~-~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++|-.| |+|.++..+++ .|. +|++++.+ +...+.+.+.+...+.++.++.+|+.+...-
T Consensus 6 ~~k~vlVTG-asggiG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 83 (258)
T 3afn_B 6 KGKRVLITG-SSQGIGLATARLFARAGA-KVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKF 83 (258)
T ss_dssp TTCEEEETT-CSSHHHHHHHHHHHHTTC-EEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeC-CCChHHHHHHHHHHHCCC-EEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHc
Confidence 567888666 45655555553 354 89999987 6655555555544444788999998865321
Q ss_pred CcccEEEEcCCC
Q 028214 112 GHVDTVVMNPPF 123 (212)
Q Consensus 112 ~~~D~i~~nppy 123 (212)
...|+++.|...
T Consensus 84 g~id~vi~~Ag~ 95 (258)
T 3afn_B 84 GGIDVLINNAGG 95 (258)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 158999988764
No 478
>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}
Probab=79.10 E-value=5.4 Score=30.54 Aligned_cols=77 Identities=21% Similarity=0.211 Sum_probs=48.2
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+...+.....+.++.++..|+.+...- .
T Consensus 32 l~~k~vlITGasggIG~~la~~L~~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 110 (279)
T 3ctm_A 32 LKGKVASVTGSSGGIGWAVAEAYAQAGA-DVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFG 110 (279)
T ss_dssp CTTCEEEETTTTSSHHHHHHHHHHHHTC-EEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhC
Confidence 367788888765443 2333344455 899999876555444444444444688899998764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|..+.
T Consensus 111 ~id~li~~Ag~~ 122 (279)
T 3ctm_A 111 TIDVFVANAGVT 122 (279)
T ss_dssp CCSEEEECGGGS
T ss_pred CCCEEEECCccc
Confidence 489999886543
No 479
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=79.06 E-value=7.1 Score=29.73 Aligned_cols=78 Identities=15% Similarity=0.075 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEE-EeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIA-IDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~-~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++.|. +...+++.|. +|+. ...++...+...+.+...+.++.++..|+.+...-
T Consensus 24 l~~k~vlVTGas~gIG~~la~~l~~~G~-~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 102 (267)
T 4iiu_A 24 AMSRSVLVTGASKGIGRAIARQLAADGF-NIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQH 102 (267)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHHTTC-EEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCC-EEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHh
Confidence 356788888865553 3333444455 6644 55666666666666655555789999998874321
Q ss_pred CcccEEEEcCCCCC
Q 028214 112 GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ~~~D~i~~nppy~~ 125 (212)
...|.++.|.-...
T Consensus 103 g~id~li~nAg~~~ 116 (267)
T 4iiu_A 103 GAWYGVVSNAGIAR 116 (267)
T ss_dssp CCCSEEEECCCCCC
T ss_pred CCccEEEECCCCCC
Confidence 16899998876543
No 480
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=78.99 E-value=12 Score=28.10 Aligned_cols=75 Identities=27% Similarity=0.267 Sum_probs=51.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+...+.. +.++.++..|+.+...- .
T Consensus 7 l~~k~vlITGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 82 (261)
T 3n74_A 7 LEGKVALITGAGSGFGEGMAKRFAKGGA-KVVIVDRDKAGAERVAGEI---GDAALAVAADISKEADVDAAVEAALSKFG 82 (261)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHH---CTTEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCchHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---CCceEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 367889988877653 3444445555 8999999987776665543 33688899998765321 1
Q ss_pred cccEEEEcCCCCC
Q 028214 113 HVDTVVMNPPFGT 125 (212)
Q Consensus 113 ~~D~i~~nppy~~ 125 (212)
..|+++.|.-...
T Consensus 83 ~id~li~~Ag~~~ 95 (261)
T 3n74_A 83 KVDILVNNAGIGH 95 (261)
T ss_dssp CCCEEEECCCCCC
T ss_pred CCCEEEECCccCC
Confidence 5799998876543
No 481
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=78.94 E-value=10 Score=29.24 Aligned_cols=73 Identities=23% Similarity=0.241 Sum_probs=49.4
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.++.++..++...... +.++.++..|+.+...- .
T Consensus 3 l~gk~~lVTGas~GIG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 78 (281)
T 3zv4_A 3 LTGEVALITGGASGLGRALVDRFVAEGA-RVAVLDKSAERLRELEVAH---GGNAVGVVGDVRSLQDQKRAAERCLAAFG 78 (281)
T ss_dssp TTTCEEEEETCSSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHT---BTTEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCcC-EEEEEeCCHHHHHHHHHHc---CCcEEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 367889988876654 3444445555 8999999987766554432 33688899998865321 1
Q ss_pred cccEEEEcCCC
Q 028214 113 HVDTVVMNPPF 123 (212)
Q Consensus 113 ~~D~i~~nppy 123 (212)
..|+++.|.-.
T Consensus 79 ~iD~lvnnAg~ 89 (281)
T 3zv4_A 79 KIDTLIPNAGI 89 (281)
T ss_dssp CCCEEECCCCC
T ss_pred CCCEEEECCCc
Confidence 57999988654
No 482
>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}
Probab=78.90 E-value=7.6 Score=28.94 Aligned_cols=75 Identities=24% Similarity=0.307 Sum_probs=46.4
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEE-eCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAI-DIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~-D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
+++++|=.|++ |.++..++ +.|. +|+.+ +.++...+...+.+...+.++.++..|+.+...-
T Consensus 4 ~~~~vlItGas-ggiG~~~a~~l~~~G~-~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 81 (247)
T 2hq1_A 4 KGKTAIVTGSS-RGLGKAIAWKLGNMGA-NIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAF 81 (247)
T ss_dssp TTCEEEESSCS-SHHHHHHHHHHHHTTC-EEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHH
T ss_pred CCcEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhc
Confidence 56778877754 55554444 4454 88888 5666555555555554455788999998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 82 ~~~d~vi~~Ag~~ 94 (247)
T 2hq1_A 82 GRIDILVNNAGIT 94 (247)
T ss_dssp SCCCEEEECC---
T ss_pred CCCCEEEECCCCC
Confidence 1589999886543
No 483
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=78.83 E-value=11 Score=28.04 Aligned_cols=72 Identities=18% Similarity=0.106 Sum_probs=48.9
Q ss_pred CCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------Ccc
Q 028214 49 NKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------GHV 114 (212)
Q Consensus 49 ~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~~~ 114 (212)
++++|-.|++.|+ +...+++.|. +|+.++.++..++...+.... ++.++..|+.+...- ...
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~---~~~~~~~D~~~~~~v~~~~~~~~~~~g~i 78 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGH-QVSMMGRRYQRLQQQELLLGN---AVIGIVADLAHHEDVDVAFAAAVEWGGLP 78 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHGG---GEEEEECCTTSHHHHHHHHHHHHHHHCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHhcC---CceEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678888866553 3344444555 899999998877766655532 588899998764321 157
Q ss_pred cEEEEcCCCC
Q 028214 115 DTVVMNPPFG 124 (212)
Q Consensus 115 D~i~~nppy~ 124 (212)
|+++.|.-..
T Consensus 79 d~lvnnAg~~ 88 (235)
T 3l6e_A 79 ELVLHCAGTG 88 (235)
T ss_dssp SEEEEECCCC
T ss_pred cEEEECCCCC
Confidence 9999887653
No 484
>4dcm_A Ribosomal RNA large subunit methyltransferase G; 23S rRNA (guanine1835-N2)-methyltransferase; HET: SAM; 2.30A {Escherichia coli}
Probab=78.79 E-value=12 Score=30.43 Aligned_cols=69 Identities=17% Similarity=0.104 Sum_probs=48.1
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCC---ceEEEEcccccCcCCCcccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLEL---DIDFVQCDIRNLEWRGHVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~---~v~~~~~d~~~~~~~~~~D~i~~npp 122 (212)
.+.+|+.++.+.|.++..++.. .++.+.-|--+...++.|+..++. .+++. +..+. ....+|+|+.-.|
T Consensus 38 ~~~~~~~~~d~~gal~~~~~~~---~~~~~~ds~~~~~~~~~n~~~~~~~~~~~~~~--~~~~~-~~~~~~~v~~~lp 109 (375)
T 4dcm_A 38 IRGPVLILNDAFGALSCALAEH---KPYSIGDSYISELATRENLRLNGIDESSVKFL--DSTAD-YPQQPGVVLIKVP 109 (375)
T ss_dssp CCSCEEEECCSSSHHHHHTGGG---CCEEEESCHHHHHHHHHHHHHTTCCGGGSEEE--ETTSC-CCSSCSEEEEECC
T ss_pred CCCCEEEECCCCCHHHHhhccC---CceEEEhHHHHHHHHHHHHHHcCCCccceEec--ccccc-cccCCCEEEEEcC
Confidence 4468999999999999988754 334554466666788899999887 24443 22221 2237999998777
No 485
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=78.61 E-value=7.3 Score=29.69 Aligned_cols=77 Identities=23% Similarity=0.200 Sum_probs=49.8
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCC---hHHHHHHHHHHhhcCCceEEEEcccccCcCC--------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDID---SDSLELASENAADLELDIDFVQCDIRNLEWR-------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~---~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-------- 111 (212)
..++++|-.|++.| ++..++ +.|. +|+.++.+ ....+.+.+.+...+.++.++..|+.+...-
T Consensus 9 l~~k~vlVTGas~G-IG~aia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 86 (262)
T 3ksu_A 9 LKNKVIVIAGGIKN-LGALTAKTFALESV-NLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAE 86 (262)
T ss_dssp CTTCEEEEETCSSH-HHHHHHHHHTTSSC-EEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHH
T ss_pred CCCCEEEEECCCch-HHHHHHHHHHHCCC-EEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHH
Confidence 46788998887655 444433 4444 78888654 3455555555555555788999998875321
Q ss_pred ---CcccEEEEcCCCCC
Q 028214 112 ---GHVDTVVMNPPFGT 125 (212)
Q Consensus 112 ---~~~D~i~~nppy~~ 125 (212)
...|+++.|.-...
T Consensus 87 ~~~g~iD~lvnnAg~~~ 103 (262)
T 3ksu_A 87 KEFGKVDIAINTVGKVL 103 (262)
T ss_dssp HHHCSEEEEEECCCCCC
T ss_pred HHcCCCCEEEECCCCCC
Confidence 16899998876543
No 486
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=78.23 E-value=6.5 Score=29.16 Aligned_cols=71 Identities=14% Similarity=0.117 Sum_probs=45.2
Q ss_pred EEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC--------CcccEEEE
Q 028214 51 VVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR--------GHVDTVVM 119 (212)
Q Consensus 51 ~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~--------~~~D~i~~ 119 (212)
++|-.|++.|. +...+++.|. +|+.++.++..++.+...+ +.++.++..|+.+...- ..+|+++.
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~ 78 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGK-ATYLTGRSESKLSTVTNCL---SNNVGYRARDLASHQEVEQLFEQLDSIPSTVVH 78 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTC-CEEEEESCHHHHHHHHHTC---SSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEE
T ss_pred EEEEecCCchHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHH---hhccCeEeecCCCHHHHHHHHHHHhhcCCEEEE
Confidence 46667765443 2333444455 7999999988776655544 33677888888764321 14699998
Q ss_pred cCCCCC
Q 028214 120 NPPFGT 125 (212)
Q Consensus 120 nppy~~ 125 (212)
|.-...
T Consensus 79 ~Ag~~~ 84 (230)
T 3guy_A 79 SAGSGY 84 (230)
T ss_dssp CCCCCC
T ss_pred eCCcCC
Confidence 876543
No 487
>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}
Probab=78.17 E-value=2.5 Score=31.41 Aligned_cols=65 Identities=20% Similarity=0.117 Sum_probs=41.6
Q ss_pred EEEEEcCCcChHHHHHHHc---CCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcC-----CCcccEEEEcCC
Q 028214 51 VVADFGCGCGTLGAAATLL---GADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEW-----RGHVDTVVMNPP 122 (212)
Q Consensus 51 ~vlDlg~G~G~~~~~~~~~---~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~-----~~~~D~i~~npp 122 (212)
+|+=+|+ |.++..+++. ....|+.+|.+++.++...+.. .+.++.+|..+... -..+|+|++-.+
T Consensus 2 ~iiIiG~--G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~-----~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~ 74 (218)
T 3l4b_C 2 KVIIIGG--ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKL-----KATIIHGDGSHKEILRDAEVSKNDVVVILTP 74 (218)
T ss_dssp CEEEECC--HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHS-----SSEEEESCTTSHHHHHHHTCCTTCEEEECCS
T ss_pred EEEEECC--CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHc-----CCeEEEcCCCCHHHHHhcCcccCCEEEEecC
Confidence 3555664 6666555532 2348999999998877654332 36789999876421 127898887544
No 488
>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*
Probab=78.17 E-value=3.5 Score=33.34 Aligned_cols=45 Identities=31% Similarity=0.415 Sum_probs=33.2
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |...+.+++. |..+|+++|.+++..+.+++
T Consensus 187 ~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~~~ 233 (373)
T 2fzw_A 187 KLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARAKE 233 (373)
T ss_dssp CCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 445788999999753 4555666643 55589999999988888764
No 489
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=78.13 E-value=8.4 Score=29.16 Aligned_cols=77 Identities=17% Similarity=0.121 Sum_probs=50.7
Q ss_pred CCCCCEEEEEcCC-cChHHH----HHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC---------
Q 028214 46 DVSNKVVADFGCG-CGTLGA----AATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR--------- 111 (212)
Q Consensus 46 ~~~~~~vlDlg~G-~G~~~~----~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~--------- 111 (212)
..+++++|-.|++ +|.++. .+++.|. +|+.++.+....+.+++.....+ ++.++..|+.+...-
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~~~~~v~~~~~~~~~ 88 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGA-ELAFTYVGDRFKDRITEFAAEFG-SELVFPCDVADDAQIDALFASLKT 88 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHTT-CCCEEECCTTCHHHHHHHHHHHHH
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCC-CEEEEecchhhHHHHHHHHHHcC-CcEEEECCCCCHHHHHHHHHHHHH
Confidence 4578899999975 244444 4444455 89999988665555555544444 477889998764321
Q ss_pred --CcccEEEEcCCCC
Q 028214 112 --GHVDTVVMNPPFG 124 (212)
Q Consensus 112 --~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 89 ~~g~id~lv~nAg~~ 103 (271)
T 3ek2_A 89 HWDSLDGLVHSIGFA 103 (271)
T ss_dssp HCSCEEEEEECCCCC
T ss_pred HcCCCCEEEECCccC
Confidence 1579999887654
No 490
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=77.92 E-value=11 Score=29.34 Aligned_cols=76 Identities=22% Similarity=0.203 Sum_probs=51.1
Q ss_pred CCCCEEEEEcCCc--Ch---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC----------
Q 028214 47 VSNKVVADFGCGC--GT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~--G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~---------- 111 (212)
..++++|-.|+++ |+ +...+++.|. +|+.++.++...+.+.+.....+ .+.+++.|+.+...-
T Consensus 28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~-~V~~~~r~~~~~~~~~~~~~~~~-~~~~~~~Dv~d~~~v~~~~~~~~~~ 105 (296)
T 3k31_A 28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGA-EVALTYLSETFKKRVDPLAESLG-VKLTVPCDVSDAESVDNMFKVLAEE 105 (296)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHHTTC-EEEEEESSGGGHHHHHHHHHHHT-CCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEEeCCCCCCHHHHHHHHHHHCCC-EEEEEeCChHHHHHHHHHHHhcC-CeEEEEcCCCCHHHHHHHHHHHHHH
Confidence 4678999999754 33 3444555555 89999998766655555544444 467889998775321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 106 ~g~iD~lVnnAG~~ 119 (296)
T 3k31_A 106 WGSLDFVVHAVAFS 119 (296)
T ss_dssp HSCCSEEEECCCCC
T ss_pred cCCCCEEEECCCcC
Confidence 1579999887654
No 491
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=77.82 E-value=7.2 Score=29.88 Aligned_cols=74 Identities=23% Similarity=0.196 Sum_probs=49.9
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|+ +...+++.|. +|+.+|.++..++.+.+.+ +.++.++..|+.+...- .
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 84 (271)
T 3tzq_B 9 LENKVAIITGACGGIGLETSRVLARAGA-RVVLADLPETDLAGAAASV---GRGAVHHVVDLTNEVSVRALIDFTIDTFG 84 (271)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTC-EEEEEECTTSCHHHHHHHH---CTTCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEcCCHHHHHHHHHHh---CCCeEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 467889988876553 3444445555 8999999877665554443 33678888998764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 85 ~id~lv~nAg~~ 96 (271)
T 3tzq_B 85 RLDIVDNNAAHS 96 (271)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 689999887654
No 492
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=77.80 E-value=3.6 Score=33.36 Aligned_cols=45 Identities=38% Similarity=0.436 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHc-CCCeEEEEeCChHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLL-GADQVIAIDIDSDSLELASE 89 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~-~~~~v~~~D~~~~~~~~a~~ 89 (212)
...++++||-.|+|. |..++.+++. |..+|+++|.+++.++.+++
T Consensus 190 ~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a~~ 236 (378)
T 3uko_A 190 KVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKK 236 (378)
T ss_dssp CCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHHHT
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHHH
Confidence 445788999999863 5566666644 66689999999988887764
No 493
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=77.67 E-value=11 Score=28.67 Aligned_cols=75 Identities=25% Similarity=0.349 Sum_probs=48.2
Q ss_pred CCCEEEEEcCCcChHHHHH----HHcCCCeEEEEeCChHHHHHHHHHHhhc--CCceEEEEcccccCcCC----------
Q 028214 48 SNKVVADFGCGCGTLGAAA----TLLGADQVIAIDIDSDSLELASENAADL--ELDIDFVQCDIRNLEWR---------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~----~~~~~~~v~~~D~~~~~~~~a~~~~~~~--~~~v~~~~~d~~~~~~~---------- 111 (212)
.++++|-.|++.| ++..+ ++.|. +|+.++.++...+.+.+.+... +.++.++..|+.+...-
T Consensus 6 ~~k~vlVTGas~g-IG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~ 83 (267)
T 2gdz_A 6 NGKVALVTGAAQG-IGRAFAEALLLKGA-KVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDH 83 (267)
T ss_dssp TTCEEEEETTTSH-HHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCc-HHHHHHHHHHHCCC-EEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHH
Confidence 5678888886544 44444 44454 8999999987665554444321 22688899998764321
Q ss_pred -CcccEEEEcCCCC
Q 028214 112 -GHVDTVVMNPPFG 124 (212)
Q Consensus 112 -~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 84 ~g~id~lv~~Ag~~ 97 (267)
T 2gdz_A 84 FGRLDILVNNAGVN 97 (267)
T ss_dssp HSCCCEEEECCCCC
T ss_pred cCCCCEEEECCCCC
Confidence 1479999887654
No 494
>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2
Probab=77.65 E-value=9.1 Score=28.88 Aligned_cols=73 Identities=21% Similarity=0.168 Sum_probs=47.4
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
..++++|-.|++. .++..++ +.|. +|+.++.++...+...+.+ +.++.++..|+.+...-
T Consensus 4 l~~k~vlVTGas~-giG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 78 (253)
T 1hxh_A 4 LQGKVALVTGGAS-GVGLEVVKLLLGEGA-KVAFSDINEAAGQQLAAEL---GERSMFVRHDVSSEADWTLVMAAVQRRL 78 (253)
T ss_dssp TTTCEEEETTTTS-HHHHHHHHHHHHTTC-EEEEECSCHHHHHHHHHHH---CTTEEEECCCTTCHHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCc-HHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHc---CCceEEEEccCCCHHHHHHHHHHHHHHc
Confidence 3567888777554 4444444 4455 8999999987665544433 33688899998764321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-..
T Consensus 79 g~id~lv~~Ag~~ 91 (253)
T 1hxh_A 79 GTLNVLVNNAGIL 91 (253)
T ss_dssp CSCCEEEECCCCC
T ss_pred CCCCEEEECCCCC
Confidence 1469999887654
No 495
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=77.57 E-value=8.7 Score=29.28 Aligned_cols=75 Identities=24% Similarity=0.243 Sum_probs=47.8
Q ss_pred CCCEEEEEcCCcChHHHHHH----HcCCCeEEEEe-CChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------
Q 028214 48 SNKVVADFGCGCGTLGAAAT----LLGADQVIAID-IDSDSLELASENAADLELDIDFVQCDIRNLEWR----------- 111 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D-~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~----------- 111 (212)
.++++|-.|++ |.++..++ +.|. +|+.++ -+....+.........+.++.++..|+.+...-
T Consensus 24 ~~k~vlITGas-~gIG~~~a~~l~~~G~-~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 101 (269)
T 3gk3_A 24 AKRVAFVTGGM-GGLGAAISRRLHDAGM-AVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADF 101 (269)
T ss_dssp CCCEEEETTTT-SHHHHHHHHHHHTTTC-EEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred cCCEEEEECCC-chHHHHHHHHHHHCCC-EEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHc
Confidence 56677777755 44444444 3454 888888 555555555444444445788999998875321
Q ss_pred CcccEEEEcCCCC
Q 028214 112 GHVDTVVMNPPFG 124 (212)
Q Consensus 112 ~~~D~i~~nppy~ 124 (212)
...|+++.|.-+.
T Consensus 102 g~id~li~nAg~~ 114 (269)
T 3gk3_A 102 GKVDVLINNAGIT 114 (269)
T ss_dssp SCCSEEEECCCCC
T ss_pred CCCCEEEECCCcC
Confidence 1689999887654
No 496
>2qrv_B DNA (cytosine-5)-methyltransferase 3-like; DNA methyltransferase 3A (DNMT3A) and ITS regulatory factor; HET: DNA SAH; 2.89A {Homo sapiens}
Probab=77.56 E-value=1.5 Score=33.43 Aligned_cols=58 Identities=16% Similarity=-0.064 Sum_probs=36.8
Q ss_pred CCCEEEEEcCCcChHHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCCC-----cccEEEEcCC
Q 028214 48 SNKVVADFGCGCGTLGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWRG-----HVDTVVMNPP 122 (212)
Q Consensus 48 ~~~~vlDlg~G~G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~~-----~~D~i~~npp 122 (212)
+..+++|++||.|. + +.+.|.. + +.|.. ...++.+|+.++...+ .+|+|+..||
T Consensus 32 ~~~~vidLFaGig~-G--l~~aGf~-~-------------~~N~~----~~~~~~~DI~~i~~~~i~~~~~~DlliGG~P 90 (230)
T 2qrv_B 32 QPVRVLSLFEDIKK-E--LTSLGFL-E-------------SGSDP----GQLKHVVDVTDTVRKDVEEWGPFDLVYGATP 90 (230)
T ss_dssp CCCCEEEESSCCTT-T--TTTTTSC-C----------------------CCEEEESCCTTCCHHHHHHTCCCSEEEEECC
T ss_pred CCceEEEeccChhH-H--HHHCCCc-h-------------hhcCC----CCcEecCChhhCCHhHhcccCCCCEEEECCC
Confidence 34589999999886 2 2333442 2 12221 2346789998875432 6899999999
Q ss_pred CCCC
Q 028214 123 FGTR 126 (212)
Q Consensus 123 y~~~ 126 (212)
....
T Consensus 91 CQ~F 94 (230)
T 2qrv_B 91 PLGH 94 (230)
T ss_dssp CTTT
T ss_pred CCcc
Confidence 9765
No 497
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=77.43 E-value=10 Score=28.59 Aligned_cols=74 Identities=23% Similarity=0.207 Sum_probs=47.6
Q ss_pred CCCCEEEEEcCCcCh---HHHHHHHcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCcCC-----------C
Q 028214 47 VSNKVVADFGCGCGT---LGAAATLLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLEWR-----------G 112 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~---~~~~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~~~-----------~ 112 (212)
..++++|-.|++.|. +...+++.|. +|+.++.++...+...+.+ +.++.++..|+.+...- .
T Consensus 3 l~~k~vlVTGas~gIG~~ia~~l~~~G~-~V~~~~r~~~~~~~~~~~~---~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 78 (254)
T 1hdc_A 3 LSGKTVIITGGARGLGAEAARQAVAAGA-RVVLADVLDEEGAATAREL---GDAARYQHLDVTIEEDWQRVVAYAREEFG 78 (254)
T ss_dssp CCCSEEEEETTTSHHHHHHHHHHHHTTC-EEEEEESCHHHHHHHHHTT---GGGEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCC-EEEEEeCCHHHHHHHHHHh---CCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 367788888865543 2333444455 8999999987665544433 22578888898764321 1
Q ss_pred cccEEEEcCCCC
Q 028214 113 HVDTVVMNPPFG 124 (212)
Q Consensus 113 ~~D~i~~nppy~ 124 (212)
..|+++.|.-..
T Consensus 79 ~iD~lv~nAg~~ 90 (254)
T 1hdc_A 79 SVDGLVNNAGIS 90 (254)
T ss_dssp CCCEEEECCCCC
T ss_pred CCCEEEECCCCC
Confidence 589999887654
No 498
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=77.18 E-value=11 Score=26.03 Aligned_cols=68 Identities=22% Similarity=0.285 Sum_probs=40.2
Q ss_pred CCCCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc---CC--CcccEE
Q 028214 47 VSNKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE---WR--GHVDTV 117 (212)
Q Consensus 47 ~~~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~---~~--~~~D~i 117 (212)
..+++|+=+|+| .++..++ ..|. +|+++|.++..++.++. .. .+.++.+|..+.. .. ..+|+|
T Consensus 17 ~~~~~v~IiG~G--~iG~~la~~L~~~g~-~V~vid~~~~~~~~~~~---~~--g~~~~~~d~~~~~~l~~~~~~~ad~V 88 (155)
T 2g1u_A 17 QKSKYIVIFGCG--RLGSLIANLASSSGH-SVVVVDKNEYAFHRLNS---EF--SGFTVVGDAAEFETLKECGMEKADMV 88 (155)
T ss_dssp CCCCEEEEECCS--HHHHHHHHHHHHTTC-EEEEEESCGGGGGGSCT---TC--CSEEEESCTTSHHHHHTTTGGGCSEE
T ss_pred cCCCcEEEECCC--HHHHHHHHHHHhCCC-eEEEEECCHHHHHHHHh---cC--CCcEEEecCCCHHHHHHcCcccCCEE
Confidence 467889999875 4433333 3344 89999999866543321 22 3456667654311 11 268988
Q ss_pred EEcCC
Q 028214 118 VMNPP 122 (212)
Q Consensus 118 ~~npp 122 (212)
+.-.|
T Consensus 89 i~~~~ 93 (155)
T 2g1u_A 89 FAFTN 93 (155)
T ss_dssp EECSS
T ss_pred EEEeC
Confidence 87544
No 499
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=77.12 E-value=5.3 Score=32.19 Aligned_cols=46 Identities=17% Similarity=0.110 Sum_probs=33.6
Q ss_pred CCCCCCEEEEEcCCc-ChHHHHHHHcCCCeEEEEeCChHHHHHHHHH
Q 028214 45 GDVSNKVVADFGCGC-GTLGAAATLLGADQVIAIDIDSDSLELASEN 90 (212)
Q Consensus 45 ~~~~~~~vlDlg~G~-G~~~~~~~~~~~~~v~~~D~~~~~~~~a~~~ 90 (212)
...++++||-.|+|. |..++.+++....+|+++|.+++..+.+++.
T Consensus 186 ~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~~l 232 (363)
T 3uog_A 186 HLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRAFAL 232 (363)
T ss_dssp CCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHH
T ss_pred CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHHHHc
Confidence 445788999999764 5566666654334999999999888887653
No 500
>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9
Probab=77.01 E-value=14 Score=24.59 Aligned_cols=66 Identities=21% Similarity=0.246 Sum_probs=40.4
Q ss_pred CCEEEEEcCCcChHHHHHH----HcCCCeEEEEeCChHHHHHHHHHHhhcCCceEEEEcccccCc----C-CCcccEEEE
Q 028214 49 NKVVADFGCGCGTLGAAAT----LLGADQVIAIDIDSDSLELASENAADLELDIDFVQCDIRNLE----W-RGHVDTVVM 119 (212)
Q Consensus 49 ~~~vlDlg~G~G~~~~~~~----~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~v~~~~~d~~~~~----~-~~~~D~i~~ 119 (212)
+++++=+|+ |.++..++ +.+ .+|+.+|.++..++.+.+.. .+.++.+|..+.. . -..+|+|+.
T Consensus 4 ~m~i~IiG~--G~iG~~~a~~L~~~g-~~v~~~d~~~~~~~~~~~~~-----~~~~~~~d~~~~~~l~~~~~~~~d~vi~ 75 (140)
T 1lss_A 4 GMYIIIAGI--GRVGYTLAKSLSEKG-HDIVLIDIDKDICKKASAEI-----DALVINGDCTKIKTLEDAGIEDADMYIA 75 (140)
T ss_dssp -CEEEEECC--SHHHHHHHHHHHHTT-CEEEEEESCHHHHHHHHHHC-----SSEEEESCTTSHHHHHHTTTTTCSEEEE
T ss_pred CCEEEEECC--CHHHHHHHHHHHhCC-CeEEEEECCHHHHHHHHHhc-----CcEEEEcCCCCHHHHHHcCcccCCEEEE
Confidence 467888876 55544444 334 48999999988766554321 3456777764321 1 126899888
Q ss_pred cCC
Q 028214 120 NPP 122 (212)
Q Consensus 120 npp 122 (212)
-.|
T Consensus 76 ~~~ 78 (140)
T 1lss_A 76 VTG 78 (140)
T ss_dssp CCS
T ss_pred eeC
Confidence 665
Done!