Query 028216
Match_columns 212
No_of_seqs 194 out of 535
Neff 5.0
Searched_HMMs 29240
Date Mon Mar 25 13:01:20 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028216.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028216hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4hg6_A Cellulose synthase subu 99.7 9E-17 3.1E-21 157.9 16.4 143 14-162 62-216 (802)
2 2z86_A Chondroitin synthase; G 97.7 2.5E-05 8.5E-10 73.1 4.7 51 85-140 90-140 (625)
3 1xhb_A Polypeptide N-acetylgal 97.7 6.1E-05 2.1E-09 68.2 6.7 57 84-143 25-82 (472)
4 3bcv_A Putative glycosyltransf 97.6 9E-05 3.1E-09 59.7 5.7 52 86-143 3-54 (240)
5 1qg8_A Protein (spore coat pol 97.4 9.4E-05 3.2E-09 60.3 4.0 48 88-141 1-48 (255)
6 2d7i_A Polypeptide N-acetylgal 97.3 0.00026 8.8E-09 66.7 6.5 52 84-138 108-159 (570)
7 2ffu_A Ppgalnact-2, polypeptid 97.3 0.00029 9.8E-09 64.6 6.2 52 84-138 62-113 (501)
8 3ckj_A Putative uncharacterize 97.0 0.00066 2.3E-08 59.1 4.9 54 85-143 45-98 (329)
9 2z86_A Chondroitin synthase; G 96.4 0.0028 9.6E-08 59.2 4.7 52 86-143 373-424 (625)
10 3f1y_A Mannosyl-3-phosphoglyce 96.0 0.0045 1.5E-07 56.1 3.8 54 85-143 91-146 (387)
11 3l7i_A Teichoic acid biosynthe 95.6 0.0019 6.6E-08 62.1 0.0 50 88-143 2-51 (729)
12 4fix_A UDP-galactofuranosyl tr 94.3 0.012 4.2E-07 56.9 1.5 46 86-135 178-224 (657)
13 1fo8_A Alpha-1,3-mannosyl-glyc 93.4 0.066 2.3E-06 48.2 4.4 47 87-138 1-47 (343)
14 2bo4_A Mannosylglycerate synth 87.2 0.7 2.4E-05 42.1 5.2 46 92-144 4-49 (397)
15 2fy7_A Beta-1,4-galactosyltran 84.4 0.4 1.4E-05 41.5 2.0 41 87-133 64-107 (287)
16 2nxv_A ATP synthase subunits r 80.3 2 6.7E-05 35.4 4.7 44 86-135 14-58 (249)
17 2zu9_A Mannosyl-3-phosphoglyce 74.5 3.7 0.00013 37.7 5.1 41 88-137 51-91 (394)
18 2wvl_A Mannosyl-3-phosphoglyce 62.7 9.3 0.00032 35.2 5.1 45 85-138 50-94 (391)
19 3ebr_A Uncharacterized RMLC-li 26.4 48 0.0016 26.0 3.2 36 126-165 119-154 (159)
20 3ni2_A 4-coumarate:COA ligase; 24.2 1E+02 0.0035 27.5 5.4 59 106-170 22-81 (536)
21 2v5c_A O-GLCNACASE NAGJ; glyco 24.0 1.4E+02 0.0049 28.5 6.6 88 103-202 164-258 (594)
22 2jxx_A Nfatc2-interacting prot 23.0 11 0.00038 27.9 -1.1 51 120-171 22-73 (97)
23 2v5d_A O-GLCNACASE NAGJ; famil 21.6 1.4E+02 0.0049 28.9 6.1 88 103-201 164-257 (737)
24 4fuq_A Malonyl COA synthetase; 21.5 1.2E+02 0.004 27.0 5.2 53 112-169 6-59 (503)
No 1
>4hg6_A Cellulose synthase subunit A; membrane translocation, cellulose synthesis, UDP-GLC binding membrane, transferase; HET: BGC UDP LDA; 3.25A {Rhodobacter sphaeroides}
Probab=99.72 E-value=9e-17 Score=157.93 Aligned_cols=143 Identities=20% Similarity=0.266 Sum_probs=115.5
Q ss_pred chhhHHHHHHHH-HHHHHHHHHHhcCCCCCc------hHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCccchhhccCC
Q 028216 14 NTTHRFLDVTIL-FLLLSLLFYRLLSLKHNG------FAWFVAFLCESCFTFVWVLITGTKWTPISYNTYPQRLQERIKE 86 (212)
Q Consensus 14 ~~~~R~~~~~~l-~~l~~yl~wR~~~tl~~~------~~wl~l~~aEl~~~~~wll~~~~~w~Pv~R~~~~drL~~~~~~ 86 (212)
++..|++.++++ ++.++|++||++.|++.. ..+++++++|+++.+.|+++++..++|..|.+.++. .+++
T Consensus 62 ~~~~~~~~~~~~~~~~~~y~~wr~~~tl~~~~~~~~~~~~~~ll~~~~~~~~~~l~~~~~~~~~~~r~~~~~~---~~~~ 138 (802)
T 4hg6_A 62 KMVPRFLLLSAASMLVMRYWFWRLFETLPPPALDASFLFALLLFAVETFSISIFFLNGFLSADPTDRPFPRPL---QPEE 138 (802)
T ss_dssp SHHHHHHHHHHHHHHHHHHHHHHHHHTSCCCSSCHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCCCCCCCCC---CTTT
T ss_pred CcchHHHHHHHHHHHHHHHHHHHhheecCCccchHHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCCCC---CccC
Confidence 344455554444 445679999999999863 246899999999999999999999999999888753 2578
Q ss_pred CCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHh-----HHHHHHHHHHhHHHHHhcCCc
Q 028216 87 LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYS-----LVEASKFAKLWVPFCKKYNIR 161 (212)
Q Consensus 87 lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~a-----l~Eaa~Fa~~wvpfC~k~~V~ 161 (212)
+|.|+|+||||| |+..++.+|+.|+++.|||.+++.|+|.|||+++-|.+. ..++++-.+....+|+++++.
T Consensus 139 ~P~VSViIPtyN---e~~~lL~~~L~Sl~~q~yp~~~~eIiVVDDgStD~T~~~~d~~i~~~~~~~~~~l~~~~~~~~v~ 215 (802)
T 4hg6_A 139 LPTVDILVPSYN---EPADMLSVTLAAAKNMIYPARLRTVVLCDDGGTDQRCMSPDPELAQKAQERRRELQQLCRELGVV 215 (802)
T ss_dssp CCCEEEEEECTT---CCHHHHHHHHHHHHTSSCCTTCCEEEEESTTCHHHHHTCSSHHHHHHHHHHHHHHHHHHHHHTCE
T ss_pred CCcEEEEEEECC---CCHHHHHHHHHHHHhccCCCCcEEEEEEECCCCccccccCCHHHHHHHHhhhHHHHHHHHhcCcE
Confidence 999999999999 999999999999999999999999999999999998642 333333334566789998876
Q ss_pred c
Q 028216 162 V 162 (212)
Q Consensus 162 ~ 162 (212)
.
T Consensus 216 ~ 216 (802)
T 4hg6_A 216 Y 216 (802)
T ss_dssp E
T ss_pred E
Confidence 3
No 2
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=97.70 E-value=2.5e-05 Score=73.10 Aligned_cols=51 Identities=18% Similarity=0.068 Sum_probs=44.1
Q ss_pred CCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHh
Q 028216 85 KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYS 140 (212)
Q Consensus 85 ~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~a 140 (212)
...|.|+|+||||| |+ ..+.+|+.|+++.+||. .+.|+|.|||+++-|.+.
T Consensus 90 ~~~p~vsviIp~~n---~~-~~l~~~l~sl~~q~~~~-~~eiivvDd~s~d~t~~~ 140 (625)
T 2z86_A 90 LIIDGLSIVIPTYN---RA-KILAITLACLCNQKTIY-DYEVIVADDGSKENIEEI 140 (625)
T ss_dssp CCCCCEEEEEEESS---CH-HHHHHHHHHHHTCCCSS-CEEEEEEEESCSSCHHHH
T ss_pred ccCCcEEEEEecCC---cH-HHHHHHHHHHHhhccCC-CeEEEEEeCCCchhHHHH
Confidence 34699999999999 85 88999999999999885 789999999999876543
No 3
>1xhb_A Polypeptide N-acetylgalactosaminyltransferase 1; glycosyltransferase-A (GT-A); HET: NAG BMA; 2.50A {Mus musculus} SCOP: b.42.2.1 c.68.1.17
Probab=97.67 E-value=6.1e-05 Score=68.19 Aligned_cols=57 Identities=16% Similarity=0.049 Sum_probs=49.1
Q ss_pred cCCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCch-hhHhHHH
Q 028216 84 IKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPL-NFYSLVE 143 (212)
Q Consensus 84 ~~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~-t~~al~E 143 (212)
.+++|.|.|.||||| |+...+.+||.|+++.+||.....|.|.|||.++- |.+.+.+
T Consensus 25 ~~~~p~vSVIIp~yN---~~~~~l~~~l~Sl~~q~~~~~~~EIIvVDd~S~d~~t~~~l~~ 82 (472)
T 1xhb_A 25 PDNLPTTSVVIVFHN---EAWSTLLRTVHSVINRSPRHMIEEIVLVDDASERDFLKRPLES 82 (472)
T ss_dssp CSCCCCEEEEEEESS---CCHHHHHHHHHHHHHSSCGGGEEEEEEEECSCCCGGGTHHHHH
T ss_pred CcCCCCeEEEEEeCC---CCHHHHHHHHHHHHhcCcHhHceEEEEEECCCCcHHHHHHHHH
Confidence 457999999999999 98889999999999999997667999999999984 6555444
No 4
>3bcv_A Putative glycosyltransferase protein; protein structure initiative II, PSI-II NYSGXRC, structural genomics; 2.35A {Bacteroides fragilis}
Probab=97.58 E-value=9e-05 Score=59.73 Aligned_cols=52 Identities=15% Similarity=0.098 Sum_probs=45.5
Q ss_pred CCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHH
Q 028216 86 ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE 143 (212)
Q Consensus 86 ~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E 143 (212)
..|.|.|.||||| ++ ..+.+++.|+++.+|| .+.|.|.|||.++-|.+.+.+
T Consensus 3 ~~p~vsViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiIvvDd~S~d~t~~~~~~ 54 (240)
T 3bcv_A 3 LIPKVSVIVPIYN---VE-KYLDQCVQALLAQTLS--DIEIILIDDESPDNCPKICDD 54 (240)
T ss_dssp CCCSEEEEEEESS---CT-TTHHHHHHHHHTCSSS--SEEEEEEECCCSSSHHHHHHH
T ss_pred CCCcEEEEEecCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECCCCcCHHHHHHH
Confidence 4689999999999 76 7899999999999998 689999999999987665554
No 5
>1qg8_A Protein (spore coat polysaccharide biosynthesis P SPSA); glycosyltransferase, transferase; 1.50A {Bacillus subtilis} SCOP: c.68.1.1 PDB: 1h7q_A* 1h7l_A 1qgq_A* 1qgs_A*
Probab=97.43 E-value=9.4e-05 Score=60.33 Aligned_cols=48 Identities=13% Similarity=0.360 Sum_probs=42.4
Q ss_pred CCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhH
Q 028216 88 PPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSL 141 (212)
Q Consensus 88 P~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al 141 (212)
|.|.|.||||| ++ ..+.+|+.|+++.+|| .+.|.|.|||+++-|...+
T Consensus 1 p~vSViIp~yn---~~-~~l~~~l~Sl~~q~~~--~~eiivvDd~S~d~t~~~~ 48 (255)
T 1qg8_A 1 PKVSVIMTSYN---KS-DYVAKSISSILSQTFS--DFELFIMDDNSNEETLNVI 48 (255)
T ss_dssp CCEEEEEEESS---CT-TTHHHHHHHHHTCSCC--CEEEEEEECSCCHHHHHHH
T ss_pred CeEEEEEEcCC---CH-HHHHHHHHHHHhccCC--ceEEEEEECCCCchHHHHH
Confidence 78999999999 76 8899999999999999 6899999999998765543
No 6
>2d7i_A Polypeptide N-acetylgalactosaminyltransferase 10; beta trefoil, rossmann fold; HET: NAG NGA UDP; 2.50A {Homo sapiens} PDB: 2d7r_A*
Probab=97.35 E-value=0.00026 Score=66.69 Aligned_cols=52 Identities=21% Similarity=0.179 Sum_probs=46.7
Q ss_pred cCCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhh
Q 028216 84 IKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNF 138 (212)
Q Consensus 84 ~~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~ 138 (212)
.+.+|.|.|.||||| |+...+.+||.|+++..||.....|.|.|||.++-|.
T Consensus 108 ~~~~P~vSVIIp~yN---e~~~~L~~~L~Sll~qt~~~~~~EIIVVDDgS~D~tl 159 (570)
T 2d7i_A 108 LETLPNTSIIIPFHN---EGWSSLLRTVHSVLNRSPPELVAEIVLVDDFSDREHL 159 (570)
T ss_dssp ESSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCCCGGG
T ss_pred CCCCCCeEEEEEECC---CCHHHHHHHHHHHHhcCCccCcEEEEEEECCCCcHHH
Confidence 467899999999999 9888999999999999999655699999999999883
No 7
>2ffu_A Ppgalnact-2, polypeptide N-acetylgalactosaminyltransferase 2, protein-UDP; ppgalnact, mucin, glycosyltransferase; HET: UDP; 1.64A {Homo sapiens} PDB: 2ffv_A*
Probab=97.31 E-value=0.00029 Score=64.60 Aligned_cols=52 Identities=21% Similarity=0.186 Sum_probs=46.4
Q ss_pred cCCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhh
Q 028216 84 IKELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNF 138 (212)
Q Consensus 84 ~~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~ 138 (212)
.+.+|.|.|.||||| |+...+.+||.|+++..||.....|.|.|||.++-|.
T Consensus 62 ~~~~p~vSVIIp~yN---~~~~~L~~~l~Sl~~q~~~~~~~EIIvVDDgS~D~t~ 113 (501)
T 2ffu_A 62 RVDLPATSVVITFHN---EARSALLRTVVSVLKKSPPHLIKEIILVDDYSNDPED 113 (501)
T ss_dssp CSSCCCEEEEEEESS---CCHHHHHHHHHHHHHHSCGGGEEEEEEEECSCSCTHH
T ss_pred CcCCCCEEEEEEeCc---CcHHHHHHHHHHHHhhCchhhceeEEEEECCCCchHH
Confidence 457999999999999 9877999999999999999656799999999998774
No 8
>3ckj_A Putative uncharacterized protein; mycobacteria, unknown function; HET: CIT; 1.80A {Mycobacterium paratuberculosis} PDB: 3ckn_A* 3cko_A* 3ckq_A* 3ckv_A* 3e26_A 3e25_A
Probab=96.98 E-value=0.00066 Score=59.08 Aligned_cols=54 Identities=15% Similarity=0.003 Sum_probs=45.4
Q ss_pred CCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHH
Q 028216 85 KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE 143 (212)
Q Consensus 85 ~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E 143 (212)
..-|.|.|.||||| |. ..+..++.|+++..|| ....|+|.|||+++-|.+.+.+
T Consensus 45 ~~~~~vSViIp~yN---~~-~~l~~~l~sl~~q~~~-~~~eiivVDdgS~D~t~~~~~~ 98 (329)
T 3ckj_A 45 KAGRTISVVLPALD---EE-DTIGSVIDSISPLVDG-LVDELIVLDSGSTDDTEIRAVA 98 (329)
T ss_dssp TTTCCEEEEEEESS---CT-TTHHHHHHHHGGGBTT-TBSEEEEEECSCCSSHHHHHHH
T ss_pred ccCCcEEEEEeeCC---CH-HHHHHHHHHHHHhhCC-CCcEEEEEeCCCCchHHHHHHH
Confidence 45699999999999 76 6789999999999998 4479999999999987665443
No 9
>2z86_A Chondroitin synthase; GT-A, glycosyltransferase A, fold; HET: UGA UDP; 2.40A {Escherichia coli} PDB: 2z87_A*
Probab=96.36 E-value=0.0028 Score=59.17 Aligned_cols=52 Identities=23% Similarity=0.310 Sum_probs=45.3
Q ss_pred CCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHH
Q 028216 86 ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE 143 (212)
Q Consensus 86 ~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E 143 (212)
..|.|.|.||||| ++ ..+.+++.|+++.+|| .+.|+|.|||+++-|.+.+.+
T Consensus 373 ~~~~vsiii~~yn---~~-~~l~~~l~s~~~q~~~--~~eiivvdd~S~d~t~~~~~~ 424 (625)
T 2z86_A 373 RVPLVSIYIPAYN---CS-KYIVRCVESALNQTIT--DLEVCICDDGSTDDTLRILQE 424 (625)
T ss_dssp SSCSEEEEEEESS---CT-TTHHHHHHHHHSSSCC--SEEEEEEEESCSSSHHHHHHH
T ss_pred cCCeEEEEEeCCC---CH-HHHHHHHHHHHhCcCC--CeEEEEEECcCChhHHHHHHH
Confidence 4689999999999 75 7899999999999998 689999999999987765554
No 10
>3f1y_A Mannosyl-3-phosphoglycerate synthase; GT-A type glycosyltransferase, GT-81, mannosyl-3-phosphoglyc synthase, GDP-mannose, transferas; 2.20A {Rubrobacter xylanophilus} PDB: 3kia_A* 3o3p_A*
Probab=95.96 E-value=0.0045 Score=56.12 Aligned_cols=54 Identities=7% Similarity=-0.101 Sum_probs=42.1
Q ss_pred CCCCCccEEEeCCCCCCCchHhHHHHHHHhhcC--CCCCCCceEEEcCCCCCchhhHhHHH
Q 028216 85 KELPPLDIFVTTADPYLEPPILTVNTVLSLLAV--DYPAHRLACYVSDDGCSPLNFYSLVE 143 (212)
Q Consensus 85 ~~lP~VDVFI~TydP~~EP~~vv~~TVls~lal--DYP~~Kl~vYv~DDG~s~~t~~al~E 143 (212)
...|.|.|.||||| |. ..+..++-++.+. +||. ...|.|.|||+++-|.+.+.+
T Consensus 91 ~~~p~vSVVIP~yN---e~-~~l~~~l~sl~~~l~~~~~-~~EIIVVDDgStD~T~~i~~~ 146 (387)
T 3f1y_A 91 ELGLTVSAVLPSRN---VA-DTVGGIIDEIHALNERAPL-IDQILVVDADSEDGTAGVAAS 146 (387)
T ss_dssp HHTCCEEEEEEESS---CT-TTHHHHHHHHHHHHHHSCC-CSEEEEEECSCSSSHHHHHHH
T ss_pred cCCCeEEEEEEcCC---CH-HHHHHHHHHHHHHHhcCCC-CeEEEEEcCcCCccHHHHHHH
Confidence 45799999999999 75 6677777777663 6764 369999999999988765444
No 11
>3l7i_A Teichoic acid biosynthesis protein F; GT-B fold, monotopic membrane protein, structural protein; 2.70A {Staphylococcus epidermidis} PDB: 3l7j_A 3l7k_A* 3l7l_A* 3l7m_A*
Probab=95.63 E-value=0.0019 Score=62.08 Aligned_cols=50 Identities=16% Similarity=0.111 Sum_probs=0.0
Q ss_pred CCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHH
Q 028216 88 PPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE 143 (212)
Q Consensus 88 P~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E 143 (212)
|.|.|.||||| ++ ..+..++-|+++.+|| .+.|.|.|||+++-|.+.+.+
T Consensus 2 p~vSVIIp~yN---~~-~~L~~~L~Sll~Qt~~--~~EIIVVDDgStD~t~~il~~ 51 (729)
T 3l7i_A 2 NKLTIIVTYYN---AE-EYITGCLESIKQQRTQ--DFNLIIVNDGSTDQSKKLMDE 51 (729)
T ss_dssp --------------------------------------------------------
T ss_pred ceEEEEEEcCC---CH-HHHHHHHHHHHhCCCC--CeEEEEEECCCCCcHHHHHHH
Confidence 78999999999 76 7889999999999999 789999999999988776555
No 12
>4fix_A UDP-galactofuranosyl transferase GLFT2; CAZY GT-2 family, glycosyltrans carbohydrate binding, membrane; 2.45A {Mycobacterium tuberculosis} PDB: 4fiy_A*
Probab=94.34 E-value=0.012 Score=56.86 Aligned_cols=46 Identities=22% Similarity=0.211 Sum_probs=39.8
Q ss_pred CCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCc-eEEEcCCCCCc
Q 028216 86 ELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRL-ACYVSDDGCSP 135 (212)
Q Consensus 86 ~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl-~vYv~DDG~s~ 135 (212)
.-|.|.|.||||| ++ ..+.+++-|+.+..|+.++. .|+|.|||.++
T Consensus 178 ~~pkVSVVIptYN---~~-~~L~~~L~SL~~qt~~~~~~~EIIVVDNgStD 224 (657)
T 4fix_A 178 GTANIAVGIPTFN---RP-ADCVNALRELTADPLVDQVIGAVIVPDQGERK 224 (657)
T ss_dssp SCCCEEEECCBSS---CH-HHHHHHHHHHTTSHHHHTTEEEEEEEECSSSC
T ss_pred CCCeEEEEEEecC---CH-HHHHHHHHHHHcCccccCCCCEEEEEECcCCC
Confidence 4589999999999 65 68999999999988866555 89999999986
No 13
>1fo8_A Alpha-1,3-mannosyl-glycoprotein beta-1,2-N- acetylglucosaminyltransferase; methylmercury derivative, N- acetylglucosaminyltransferase I; 1.40A {Oryctolagus cuniculus} SCOP: c.68.1.10 PDB: 1fo9_A 1foa_A* 2apc_A* 2am3_A* 2am4_A* 2am5_A*
Probab=93.39 E-value=0.066 Score=48.18 Aligned_cols=47 Identities=21% Similarity=0.152 Sum_probs=40.0
Q ss_pred CCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhh
Q 028216 87 LPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNF 138 (212)
Q Consensus 87 lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~ 138 (212)
++.+=|.|.||| -| + +.+++-|+++...+.++.-++|+|||....+.
T Consensus 1 ~~~~pViI~~yN---Rp-~-l~~~L~sL~~~~p~~~~~~iivsdDgs~~~~~ 47 (343)
T 1fo8_A 1 LAVIPILVIACD---RS-T-VRRCLDKLLHYRPSAELFPIIVSQDCGHEETA 47 (343)
T ss_dssp CCCCCEEEEESS---CT-T-HHHHHHHHHHHCSCTTTSCEEEEECTTCHHHH
T ss_pred CCcccEEEEECC---cH-H-HHHHHHHHHhcCCCcCCcEEEEEECCCCHHHH
Confidence 456789999999 88 6 99999999999977788899999999875443
No 14
>2bo4_A Mannosylglycerate synthase; catalysis, glycosyltransferase, mannose, transferase, stereoselectivity; HET: FLC; 1.95A {Rhodothermus marinus} SCOP: c.68.1.18 PDB: 2bo6_A 2bo7_A* 2bo8_A* 2xw2_A 2y4j_A 2xw3_A* 2xw4_A* 2xw5_A* 2y4k_A* 2y4l_A* 2y4m_A*
Probab=87.17 E-value=0.7 Score=42.11 Aligned_cols=46 Identities=13% Similarity=0.093 Sum_probs=30.1
Q ss_pred EEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHHH
Q 028216 92 IFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVEA 144 (212)
Q Consensus 92 VFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~Ea 144 (212)
|.||++| |-..-+...+..+. .+| ...|.|.|||+++-|.+.+.+.
T Consensus 4 VIiP~~e---E~I~~vl~~l~~~~--~~~--~~EIIVVDDGStD~T~eia~~l 49 (397)
T 2bo4_A 4 VVFPFKH---EHPEVLLHNVRVAA--AHP--RVHEVLCIGYERDQTYEAVERA 49 (397)
T ss_dssp EEEECCS---SCHHHHHHHHHHHH--HST--TCCEEEEEESSCCHHHHHHHHH
T ss_pred EEEeCCc---cCHHHHHHHHHHhc--cCC--CeEEEEEECcCCccHHHHHHHh
Confidence 5677666 54334444443332 245 4689999999999999877653
No 15
>2fy7_A Beta-1,4-galactosyltransferase 1; M339H mutant, APO enzyme; HET: PGE; 1.70A {Homo sapiens} PDB: 2aec_A* 2aes_A* 2ae7_A* 2ah9_A* 2agd_A* 2fya_A* 2fyb_A* 3ee5_A* 2fyc_B* 1tw1_A* 1tw5_A* 1tvy_A* 1nmm_B* 1o0r_A* 1yro_B* 1nf5_B* 1nhe_B* 1nkh_B* 1nqi_B* 1nwg_B* ...
Probab=84.38 E-value=0.4 Score=41.53 Aligned_cols=41 Identities=10% Similarity=-0.001 Sum_probs=33.3
Q ss_pred CCCccEEEeCCCCCCCchHhHHHHHHHhh---cCCCCCCCceEEEcCCCC
Q 028216 87 LPPLDIFVTTADPYLEPPILTVNTVLSLL---AVDYPAHRLACYVSDDGC 133 (212)
Q Consensus 87 lP~VDVFI~TydP~~EP~~vv~~TVls~l---alDYP~~Kl~vYv~DDG~ 133 (212)
.|.|-|.||||| ++ ..+..++-|++ +-.|+ .+.|+|.||+.
T Consensus 64 ~~~VSIIIP~yN---~~-~~L~~~L~sl~~~l~q~~~--~~EIiVVdds~ 107 (287)
T 2fy7_A 64 PHKVAIIIPFRN---RQ-EHLKYWLYYLHPVLQRQQL--DYGIYVINQAG 107 (287)
T ss_dssp SCEEEEEEEESS---CH-HHHHHHHHHHHHHHHHTTC--EEEEEEEEECS
T ss_pred CCcEEEEEeeCC---CH-HHHHHHHHHHHHHHHHhcC--CceEEEEEeCC
Confidence 578999999999 76 67788888877 56777 67899988843
No 16
>2nxv_A ATP synthase subunits region ORF 6; majastridin, ATPase operon, glycosyl transferase, rossmann F sulphur SAD, transferase; 1.10A {Rhodobacter blasticus} PDB: 2qgi_A*
Probab=80.30 E-value=2 Score=35.39 Aligned_cols=44 Identities=7% Similarity=-0.062 Sum_probs=31.5
Q ss_pred CCCCccEEEeCCCCCCCchHhHHHHHHHhh-cCCCCCCCceEEEcCCCCCc
Q 028216 86 ELPPLDIFVTTADPYLEPPILTVNTVLSLL-AVDYPAHRLACYVSDDGCSP 135 (212)
Q Consensus 86 ~lP~VDVFI~TydP~~EP~~vv~~TVls~l-alDYP~~Kl~vYv~DDG~s~ 135 (212)
.-|.|-| |++|| + ...+.+++.|+. ++..+.. ..|.|.|+|.++
T Consensus 14 ~~~~iSI-I~~yN---~-~~~l~~~l~sl~~sl~~q~~-~EiIVVDn~s~d 58 (249)
T 2nxv_A 14 STLMFSV-CSLVR---D-QAKYDRLLESFERFGFTPDK-AEFLAADNREGN 58 (249)
T ss_dssp CCCSEEE-EEEES---C-HHHHHHHHHHHHHTTCCTTT-EEEEEEECTTSC
T ss_pred CcceEEE-EEeeC---C-HHHHHHHHHHHHHhccCCCc-EEEEEEECCCCC
Confidence 3456776 67899 5 478889998665 3333433 789999999877
No 17
>2zu9_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, glycosyltransferase, GT55, GDP, cytoplasm, magnesium, transferase; HET: GDP; 2.00A {Pyrococcus horikoshii} PDB: 2zu7_A* 2zu8_A*
Probab=74.48 E-value=3.7 Score=37.71 Aligned_cols=41 Identities=12% Similarity=0.101 Sum_probs=28.5
Q ss_pred CCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchh
Q 028216 88 PPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLN 137 (212)
Q Consensus 88 P~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t 137 (212)
..+-|.||.|| |-.. +..++++.+..+ ..|.|.|||.++-|
T Consensus 51 ~~iSVVIP~yN---EE~~-lI~~vL~~i~~~-----~eIIvVDDgSrD~t 91 (394)
T 2zu9_A 51 GKMAVIVPMKN---EKLH-LVDGVLKAIPHK-----CPIIIVSNSKREGP 91 (394)
T ss_dssp TTEEEEEEESS---CCHH-HHHHHHHHSCTT-----SCEEEEECCCCSSS
T ss_pred CCEEEEEecCc---ccHH-HHHHHHHcCCCC-----cEEEEEECcCcccc
Confidence 57999999999 8743 355555554322 45888899996655
No 18
>2wvl_A Mannosyl-3-phosphoglycerate synthase; GT-A fold, transferase, glycosyltransferase, retaining mecha glucosyl transferase; HET: GDD; 2.81A {Thermus thermophilus} PDB: 2wvk_A* 2wvm_A*
Probab=62.74 E-value=9.3 Score=35.24 Aligned_cols=45 Identities=16% Similarity=0.006 Sum_probs=32.7
Q ss_pred CCCCCccEEEeCCCCCCCchHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhh
Q 028216 85 KELPPLDIFVTTADPYLEPPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNF 138 (212)
Q Consensus 85 ~~lP~VDVFI~TydP~~EP~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~ 138 (212)
+....+-|.||+|| |..- ++-++++--+. ...|.|.|||..+-+.
T Consensus 50 ~i~~klSIVVPvYN---Ee~~----lLesVl~qi~~--d~eIIlVdDGS~D~s~ 94 (391)
T 2wvl_A 50 DVLEQTAIVVPTRN---ERLK----LLEGVLSGIPH--EALILVASNSSPDRFQ 94 (391)
T ss_dssp HHHTTEEEEEEESS---CCHH----HHHHHHHTSCT--TSEEEEEECCCHHHHH
T ss_pred hHHhceEEEEeccC---cHHH----HHHHHHhcCCC--CceEEEEECCCCCChH
Confidence 45677899999999 8753 34444444444 6789999999977653
No 19
>3ebr_A Uncharacterized RMLC-like cupin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; 2.60A {Ralstonia eutropha JMP134}
Probab=26.44 E-value=48 Score=26.03 Aligned_cols=36 Identities=17% Similarity=0.190 Sum_probs=23.7
Q ss_pred EEEcCCCCCchhhHhHHHHHHHHHHhHHHHHhcCCcccCc
Q 028216 126 CYVSDDGCSPLNFYSLVEASKFAKLWVPFCKKYNIRVRAP 165 (212)
Q Consensus 126 vYv~DDG~s~~t~~al~Eaa~Fa~~wvpfC~k~~V~~r~P 165 (212)
.++-+||.-..+.+. ..+...|..+|+++|+.|+.=
T Consensus 119 ~~~~~~g~~~~~~d~----~~~~~~~~~~~~~~g~~~~~~ 154 (159)
T 3ebr_A 119 LYLDDKDNIIAVENW----KTSMDRYLNYCKAHGIRPKDL 154 (159)
T ss_dssp EEECTTCCEEEEECH----HHHHHHHHHHHHHTTCCCCCC
T ss_pred EecCCCCCEEEEcCH----HHHHHHHHHHHHHcCCCcccc
Confidence 456666655444442 234457889999999998764
No 20
>3ni2_A 4-coumarate:COA ligase; 4CL, phenylpropanoid biosynthesis; HET: AYL EPE; 1.90A {Populus tomentosa} PDB: 3a9v_A* 3a9u_A*
Probab=24.17 E-value=1e+02 Score=27.54 Aligned_cols=59 Identities=12% Similarity=0.104 Sum_probs=36.2
Q ss_pred hHHHHHHHhhcCCCCCCCceEEEcCCCCCchhhHhHHH-HHHHHHHhHHHHHhcCCcccCccchhc
Q 028216 106 LTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE-ASKFAKLWVPFCKKYNIRVRAPFRYFL 170 (212)
Q Consensus 106 vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E-aa~Fa~~wvpfC~k~~V~~r~P~~YF~ 170 (212)
.+...++.-.+-.+| ++..+ +.+++++.+|+..+.+ +.++|..+ ++.||.+...-+.+.
T Consensus 22 ~~l~~~l~~~a~~~p-~~~a~-~~~~~~~~~Ty~el~~~~~~lA~~L----~~~Gv~~gd~V~i~~ 81 (536)
T 3ni2_A 22 LPLHSYVLENLSNHS-SKPCL-INGANGDVYTYADVELTARRVASGL----NKIGIQQGDVIMLFL 81 (536)
T ss_dssp CCHHHHHTTTGGGST-TSEEE-EETTTCCEEEHHHHHHHHHHHHHHH----HHTTCCTTCEEEEEC
T ss_pred CcHHHHHHHHhhcCC-CceEE-EECCCCCEEEHHHHHHHHHHHHHHH----HHcCCCCCCEEEEEc
Confidence 344455555566788 44443 3444567899998776 66666655 668887655444443
No 21
>2v5c_A O-GLCNACASE NAGJ; glycosidase, GH84, GH84C, hydrolase, coiled coil, family 84 glycoside hydrolase, carbohydrate binding module; 2.10A {Clostridium perfringens} PDB: 2cbj_A* 2cbi_A 2vur_A* 2x0y_A* 2j62_A* 2wb5_A* 2xpk_A* 2yds_A* 2ydr_A* 2ydq_A*
Probab=24.04 E-value=1.4e+02 Score=28.47 Aligned_cols=88 Identities=7% Similarity=-0.044 Sum_probs=51.4
Q ss_pred chHhHHHHHHHhhcCCCCCCCceEEEcCCC----CCchhhHhHHHHHHHHHHhHHHHHhcCCccc---CccchhccCCCC
Q 028216 103 PPILTVNTVLSLLAVDYPAHRLACYVSDDG----CSPLNFYSLVEASKFAKLWVPFCKKYNIRVR---APFRYFLRESDE 175 (212)
Q Consensus 103 P~~vv~~TVls~lalDYP~~Kl~vYv~DDG----~s~~t~~al~Eaa~Fa~~wvpfC~k~~V~~r---~P~~YF~~~~~~ 175 (212)
|.+.+.+.+-..-. |=-+.++.++.||- +-.. .+...|..++ +..+.+|+++||+.- .|+-++--.
T Consensus 164 ~~~~ik~~id~ma~--~KlN~~h~Hl~DDq~~~~~wr~-~Yp~~~~~~i-~elv~yA~~rgI~vv~~i~Pe~d~~~~--- 236 (594)
T 2v5c_A 164 THQDRLDQIKFYGE--NKLNTYIYAPKDDPYHREKWRE-PYPESEMQRM-QELINASAENKVDFVFGISPGIDIRFD--- 236 (594)
T ss_dssp CHHHHHHHHHHHHH--TTCCEEEECCTTCGGGTTTTTS-CCCGGGHHHH-HHHHHHHHHTTCEEEEEECGGGTCCCS---
T ss_pred CHHHHHHHHHHHHH--hCCcEEEEecccCcccccccCC-CCCHHHHHHH-HHHHHHHHHCCcEEEEecCCCccccCC---
Confidence 34556666543322 22346778899993 2211 1222222233 346789999999974 566544211
Q ss_pred CCCCCChhhHHHHHHHHHHHHHHHccc
Q 028216 176 PPCASSWEFQQDWEKMKSTRDFAETLK 202 (212)
Q Consensus 176 ~~~~~~~~f~~e~~~~k~~Yee~k~~~ 202 (212)
..+-.+++..|+++|+++.+.+
T Consensus 237 -----~~~~~~~~~~l~~k~~~l~~~G 258 (594)
T 2v5c_A 237 -----GDAGEEDFNHLITKAESLYDMG 258 (594)
T ss_dssp -----THHHHHHHHHHHHHHHHHHTTT
T ss_pred -----CcchHHHHHHHHHHHHHHHhcC
Confidence 1334678899999999988733
No 22
>2jxx_A Nfatc2-interacting protein; nuclear factor of activated T-cells, cytoplasmic 2- interacting protein, ubiquitin like homologue; NMR {Homo sapiens}
Probab=22.97 E-value=11 Score=27.89 Aligned_cols=51 Identities=16% Similarity=0.138 Sum_probs=34.8
Q ss_pred CCCCceEEEcCCCCC-chhhHhHHHHHHHHHHhHHHHHhcCCcccCccchhcc
Q 028216 120 PAHRLACYVSDDGCS-PLNFYSLVEASKFAKLWVPFCKKYNIRVRAPFRYFLR 171 (212)
Q Consensus 120 P~~Kl~vYv~DDG~s-~~t~~al~Eaa~Fa~~wvpfC~k~~V~~r~P~~YF~~ 171 (212)
+.+++++-|.|..|+ .+.|. +.....|.+.--.||++.|+.+.+-..+|..
T Consensus 22 ~~~~I~LkV~~~dg~~~v~fk-Ik~~t~l~kLm~aY~~~~g~~~~~vrF~FDG 73 (97)
T 2jxx_A 22 TSQQLQLRVQGKEKHQTLEVS-LSRDSPLKTLMSHYEEAMGLSGRKLSFFFDG 73 (97)
T ss_dssp SCSEEEEEEEESSSSCEEEEE-EETTSCHHHHHHHHHHHTTCSSSCCEEEETT
T ss_pred CCCeEEEEEEcCCCCEEEEEE-ECCCChHHHHHHHHHHHHCCCcccEEEEECC
Confidence 347899999875554 54442 2333345556667999999998887777854
No 23
>2v5d_A O-GLCNACASE NAGJ; family 32 carbohydrate binding module, glycosidase, GH84, GH84C, CBM32, hydrolase, coiled coil; 3.30A {Clostridium perfringens}
Probab=21.62 E-value=1.4e+02 Score=28.94 Aligned_cols=88 Identities=7% Similarity=0.011 Sum_probs=51.2
Q ss_pred chHhHHHHHHHhhcCCCCCCCceEEEcCCCCCchhh---HhHHHHHHHHHHhHHHHHhcCCccc---CccchhccCCCCC
Q 028216 103 PPILTVNTVLSLLAVDYPAHRLACYVSDDGCSPLNF---YSLVEASKFAKLWVPFCKKYNIRVR---APFRYFLRESDEP 176 (212)
Q Consensus 103 P~~vv~~TVls~lalDYP~~Kl~vYv~DDG~s~~t~---~al~Eaa~Fa~~wvpfC~k~~V~~r---~P~~YF~~~~~~~ 176 (212)
|.+.+.+.|-..-. |=-+.++.++.||-+-...+ +...|..++ +..+.+|+++||+.- .|+-++--.+
T Consensus 164 ~~~~~~~~id~ma~--~K~N~~h~hl~Dd~~~~~~wr~~y~~~~~~~~-~elv~ya~~rgI~vv~~i~P~~~~~~~~--- 237 (737)
T 2v5d_A 164 THQDRLDQIKFYGE--NKLNTYIYAPKDDPYHREKWREPYPESEMQRM-QELINASAENKVDFVFGISPGIDIRFDG--- 237 (737)
T ss_dssp CHHHHHHHHHHHHH--TTCCEEECCCSCCSTTTTTC-----CTTHHHH-HHHHHHHHHTTCEEEECCCCGGGCCCSS---
T ss_pred CHHHHHHHHHHHHH--hCCeEEEEecccccchhhccCcCCCHHHHHHH-HHHHHHHHHCCCEEEEecCCCccccCCC---
Confidence 34556665543322 22246777899994332221 222222233 347789999999965 5776653221
Q ss_pred CCCCChhhHHHHHHHHHHHHHHHcc
Q 028216 177 PCASSWEFQQDWEKMKSTRDFAETL 201 (212)
Q Consensus 177 ~~~~~~~f~~e~~~~k~~Yee~k~~ 201 (212)
.+-.++...|+++|+++.+.
T Consensus 238 -----~~~~~~~~~l~~~~~~~~~~ 257 (737)
T 2v5d_A 238 -----DAGEEDFNHLITKAESLYDM 257 (737)
T ss_dssp -----BTTHHHHHHHHHHHHHHHHH
T ss_pred -----cccHHHHHHHHHHHHHHHhc
Confidence 22367888999999998773
No 24
>4fuq_A Malonyl COA synthetase; ANL superfamily, methylma malonate, ligase; HET: MSE; 1.70A {Rhodopseudomonas palustris} PDB: 4fut_A* 4gxr_A* 4gxq_A*
Probab=21.52 E-value=1.2e+02 Score=26.96 Aligned_cols=53 Identities=11% Similarity=0.098 Sum_probs=33.7
Q ss_pred HHhhcCCCCCCCceEEEcCCCCCchhhHhHHH-HHHHHHHhHHHHHhcCCcccCccchh
Q 028216 112 LSLLAVDYPAHRLACYVSDDGCSPLNFYSLVE-ASKFAKLWVPFCKKYNIRVRAPFRYF 169 (212)
Q Consensus 112 ls~lalDYP~~Kl~vYv~DDG~s~~t~~al~E-aa~Fa~~wvpfC~k~~V~~r~P~~YF 169 (212)
+.-.+-.+| ++..+.+.+++++.+|+..|.+ +.++|..+ +++||.+-..-+.+
T Consensus 6 ~~~~a~~~p-~~~a~~~~~~~~~~~Ty~eL~~~~~~lA~~L----~~~Gv~~gd~V~i~ 59 (503)
T 4fuq_A 6 FARLFDKLD-DPHKLAIETAAGDKISYAELVARAGRVANVL----VARGLQVGDRVAAQ 59 (503)
T ss_dssp HHHHHSCCS-CTTSEEEEETTCCEEEHHHHHHHHHHHHHHH----HHTTCCTTCEEEEE
T ss_pred HHHHHHhCC-CCceEEEecCCCcEEEHHHHHHHHHHHHHHH----HHcCCCCCCEEEEE
Confidence 344455677 4455666666677899998776 66666655 66788765444433
Done!