BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028225
(212 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q53YF3|SPC3B_ARATH Signal peptidase complex subunit 3B OS=Arabidopsis thaliana
GN=At5g27430 PE=2 SV=1
Length = 167
Score = 303 bits (777), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 145/167 (86%), Positives = 152/167 (91%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 105
MHSFGYRANALLTFAVTILA +CAIAS SDN + +PSAQI+ILNINWFQKQPHGNDEVS
Sbjct: 1 MHSFGYRANALLTFAVTILAFICAIASFSDNFSNQNPSAQIQILNINWFQKQPHGNDEVS 60
Query: 106 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 165
LTLNITADLQSLFTWNTKQ+F FVAAEYET KNALNQVSLWDAIIP KE AKF I SNK
Sbjct: 61 LTLNITADLQSLFTWNTKQVFAFVAAEYETSKNALNQVSLWDAIIPEKEHAKFWIQISNK 120
Query: 166 YRFIDQGHNLRSKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDYR 212
YRFIDQGHNLR K+FNLTLHWHVMPKTGKMFA+KIVMSGYRLP YR
Sbjct: 121 YRFIDQGHNLRGKDFNLTLHWHVMPKTGKMFADKIVMSGYRLPNAYR 167
>sp|Q9MA96|SPC3A_ARATH Signal peptidase complex subunit 3A OS=Arabidopsis thaliana
GN=At3g05230 PE=2 SV=1
Length = 167
Score = 284 bits (727), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 133/167 (79%), Positives = 149/167 (89%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 105
MH+FGYRANALLTFAVT LA +CAIAS SD + +PSA+I+ILNIN F+KQ HGNDEVS
Sbjct: 1 MHTFGYRANALLTFAVTALAFICAIASFSDKFSNQNPSAEIQILNINRFKKQSHGNDEVS 60
Query: 106 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 165
LTL+I+ADLQSLFTWNTKQ+F+FVAAEYETPKN+LNQVSLWDAIIPAKE AKF I SNK
Sbjct: 61 LTLDISADLQSLFTWNTKQVFVFVAAEYETPKNSLNQVSLWDAIIPAKEHAKFRIQVSNK 120
Query: 166 YRFIDQGHNLRSKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDYR 212
YRFIDQG NLR K+FNLTLHWHVMPKTGKMFA+KIV+ GY LP+ YR
Sbjct: 121 YRFIDQGQNLRGKDFNLTLHWHVMPKTGKMFADKIVLPGYSLPDAYR 167
>sp|Q9LGB4|SPCS3_ORYSJ Probable signal peptidase complex subunit 3 OS=Oryza sativa subsp.
japonica GN=Os01g0131800 PE=3 SV=2
Length = 147
Score = 118 bits (295), Expect = 3e-26, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 89/166 (53%), Gaps = 21/166 (12%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 105
MHS+ R T A +L C AS D + PS AQ + IN F KQ +GND+V
Sbjct: 1 MHSWVQRLLTTATTAALLLLAACCAASALDAFHVPSVQAQAHVTKINRFHKQLNGNDKV- 59
Query: 106 LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSNK 165
F+F+ AEYE KN+LNQVSLWD IIP K+ A + +K
Sbjct: 60 --------------------FVFLTAEYENSKNSLNQVSLWDHIIPDKDKANLQVEVKSK 99
Query: 166 YRFIDQGHNLRSKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDY 211
Y IDQG +LR K+ L LHWHVMPK G M +++ +S + LP+ Y
Sbjct: 100 YPLIDQGSSLRGKKVQLVLHWHVMPKAGVMIRDRMALSEFNLPDSY 145
>sp|P28687|SPCS3_CHICK Signal peptidase complex subunit 3 OS=Gallus gallus GN=SPC22 PE=1
SV=1
Length = 180
Score = 99.4 bits (246), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 58/157 (36%), Positives = 90/157 (57%), Gaps = 7/157 (4%)
Query: 46 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSPSA--QIEILNINWFQKQPHG 100
M++ RAN+L F+++++A + C I + + P A ++ + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKERSVPVSIAVSRVTLRNVEDFTGPRER 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAK-FS 159
+D +T +ITADLQS+F WN KQLF++++AEY T NALNQV LWD II + + F
Sbjct: 61 SDLAFVTFDITADLQSIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIILRGDNPRLFL 120
Query: 160 IHTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTGKM 195
+KY F D G+ L+ + LTL W+V+P G +
Sbjct: 121 KDMKSKYFFFDDGNGLKGNRNVTLTLSWNVVPNAGLL 157
>sp|P61009|SPCS3_HUMAN Signal peptidase complex subunit 3 OS=Homo sapiens GN=SPCS3 PE=1
SV=1
Length = 180
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 46 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSP--SAQIEILNINWFQKQPHG 100
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 161 -HTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTG 193
KY F D G+ L+ + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|P61008|SPCS3_CANFA Signal peptidase complex subunit 3 OS=Canis familiaris GN=SPCS3
PE=1 SV=1
Length = 180
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 46 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSP--SAQIEILNINWFQKQPHG 100
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 161 -HTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTG 193
KY F D G+ L+ + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|Q3SZU5|SPCS3_BOVIN Signal peptidase complex subunit 3 OS=Bos taurus GN=SPCS3 PE=2 SV=1
Length = 180
Score = 94.7 bits (234), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 89/155 (57%), Gaps = 7/155 (4%)
Query: 46 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSP--SAQIEILNINWFQKQPHG 100
M++ RAN+L F+++++A + C I + + + P ++I + N+ F
Sbjct: 1 MNTVLSRANSLFAFSLSVMAALTFGCFITTAFKDRSVPVRLHVSRIMLKNVEDFTGPRER 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T +ITADL+++F WN KQLF++++AEY T NALNQV LWD I+ + K +
Sbjct: 61 SDLGFITFDITADLENIFDWNVKQLFLYLSAEYSTKNNALNQVVLWDKIVLRGDNPKLLL 120
Query: 161 -HTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTG 193
KY F D G+ L+ + LTL W+V+P G
Sbjct: 121 KDMKTKYFFFDDGNGLKGNRNVTLTLSWNVVPNAG 155
>sp|Q9D365|SPCS3_MOUSE Signal peptidase complex subunit 3 OS=Mus musculus GN=Spcs3 PE=2
SV=1
Length = 180
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/155 (35%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 46 MHSFGYRANALLTFAVTILA---LMCAIASLSDNLNTPSP--SAQIEILNINWFQKQPHG 100
M+S RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNSLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 161 -HTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTG 193
+KY F D GH L+ + LTL W V+P G
Sbjct: 121 KDVKSKYFFFDDGHGLKGNRNVTLTLSWQVIPIAG 155
>sp|Q568Z4|SPCS3_RAT Signal peptidase complex subunit 3 OS=Rattus norvegicus GN=Spcs3
PE=2 SV=1
Length = 180
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 54/155 (34%), Positives = 86/155 (55%), Gaps = 7/155 (4%)
Query: 46 MHSFGYRANALLTFAVTILA---LMCAIASLSDNLNTPSP--SAQIEILNINWFQKQPHG 100
M++ RAN+L F ++++A L C + + + + P ++I + + F
Sbjct: 1 MNTLLSRANSLFAFTLSVMAALTLGCILTTAFKDRSAPVRLHVSRILLKKVEDFTGPRKK 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T +I+ADL+ F WN KQLF++++AEY T NA+NQV LWD I+ E K ++
Sbjct: 61 SDLGFITFHISADLEKTFDWNVKQLFLYLSAEYSTKSNAVNQVVLWDKILLRGENPKLNL 120
Query: 161 -HTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTG 193
+KY F D GH L+ + LTL W V+P G
Sbjct: 121 KDVKSKYFFFDDGHGLKGNRNVTLTLSWQVIPIAG 155
>sp|Q60MW2|SPCS3_CAEBR Probable signal peptidase complex subunit 3 OS=Caenorhabditis
briggsae GN=CBG22979 PE=3 SV=1
Length = 180
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDE-- 103
MH+ RAN+LL F + ++A + A LS + S +E+ +I + + D+
Sbjct: 1 MHNLLSRANSLLAFTLWVMAAVTAACFLSTVFLDYTVSNHLEVNDIKIRNVRDYATDDKQ 60
Query: 104 ---VSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 159
+L N+ D LF WN KQLF+++ AEY++ +NA+NQV +WD I+ A+
Sbjct: 61 ADLATLAFNLKVDFSRLFNWNVKQLFVYLVAEYKSAENAVNQVVIWDRIVERAERVVMDE 120
Query: 160 IHTSNKYRFIDQG-HNLRSKEFNLTLHWHVMPKTGKM 195
I KY F+D G H L+ L ++V+P G +
Sbjct: 121 IGVKTKYYFLDDGAHLLKHDNVTFVLRYNVIPNAGYL 157
>sp|B0G180|SPCS3_DICDI Signal peptidase complex subunit 3 OS=Dictyostelium discoideum
GN=spcs3 PE=3 SV=1
Length = 170
Score = 89.0 bits (219), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 55/167 (32%), Positives = 92/167 (55%), Gaps = 3/167 (1%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDNLNTPSPSAQIEILNINWFQKQPHGNDEVS 105
MHS RAN ++ F +L + + LS + I++ I+ F Q N E S
Sbjct: 1 MHSLSQRANTIVCFGGIVLVGVLLLNVLSRAFFSDHVDVDIKLNEIHRFNTQ--RNFEYS 58
Query: 106 -LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSIHTSN 164
+++++ A+L+ LF WNTK LF++V AEY T +N L+QV +WD I+ K A +
Sbjct: 59 FISIDLDANLEPLFNWNTKMLFLYVTAEYRTKQNVLSQVVVWDHILTEKSKANIHEKRLS 118
Query: 165 KYRFIDQGHNLRSKEFNLTLHWHVMPKTGKMFANKIVMSGYRLPEDY 211
KY I+QG L++ LT +++V+P +G + +++ S ++ P Y
Sbjct: 119 KYPIINQGLGLKNNTIKLTFNYNVVPISGILTRHQVGTSEFKFPTTY 165
>sp|P34525|SPCS3_CAEEL Probable signal peptidase complex subunit 3 OS=Caenorhabditis
elegans GN=K12H4.4 PE=1 SV=1
Length = 180
Score = 88.6 bits (218), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 46 MHSFGYRANALLTFAVTILALMCAIASLSDN-LNTPSPSA----QIEILNINWFQKQPHG 100
MH+ RANALL F + ++A + A LS L+ P+ +++ N+ +
Sbjct: 1 MHNLLSRANALLAFTLWVMAAVTAACFLSTVFLDYTVPTKLTVNDVKVRNVVDYATDEQQ 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIP-AKEFAKFS 159
D +L N+ D +F WN KQLF+++ AEY++ N +NQV LWD I+ A
Sbjct: 61 ADLATLNFNLKVDFSKIFNWNVKQLFVYLVAEYKSKVNEVNQVVLWDRIVERADRVVMDE 120
Query: 160 IHTSNKYRFIDQGHNLRS-KEFNLTLHWHVMPKTGKM 195
I +KY F+D G NL + K L ++V+P +G +
Sbjct: 121 IGVKSKYYFLDDGTNLLNHKNVTFVLRYNVIPNSGYL 157
>sp|Q9VCA9|SPCS3_DROME Signal peptidase complex subunit 3 OS=Drosophila melanogaster
GN=Spase22-23 PE=2 SV=1
Length = 179
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 94/176 (53%), Gaps = 12/176 (6%)
Query: 46 MHSFGYRANALLTFAVTILALM---CAIASLSDNLNTPSPSAQIEIL--NINWFQKQPHG 100
MH+ R NA + + +++LA + C ++++ + T + + +L N+ +
Sbjct: 1 MHTVLTRGNATVAYTLSVLACLTFSCFLSTVFLDYRTDANINTVRVLVKNVPDYGASREK 60
Query: 101 NDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEFAKFSI 160
+D +T ++ +L +F WN KQLF+++ AEY+TP N LNQV LWD II + A
Sbjct: 61 HDLGFVTFDLQTNLTGIFNWNVKQLFLYLTAEYQTPANQLNQVVLWDKIILRGDNAVLDF 120
Query: 161 HTSN-KYRFIDQGHNLR-SKEFNLTLHWHVMPKTGKMFANKIVMSG---YRLPEDY 211
N KY F D G+ L+ ++ +L L W+++P G + + +G ++ P DY
Sbjct: 121 KNMNTKYYFWDDGNGLKDNRNVSLYLSWNIIPNAGLL--PSVQATGKHLFKFPADY 174
>sp|Q6CRY8|SCP3_KLULA Microsomal signal peptidase subunit 3 OS=Kluyveromyces lactis
(strain ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 /
NRRL Y-1140 / WM37) GN=SPC3 PE=3 SV=1
Length = 189
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 103 EVS-LTLNITADLQSLFTWNTKQLFIFVAAEYETPKN--ALNQVSLWDAIIPAKEFAKFS 159
EVS + N D LF WNTKQ+F +V AEYE +N +N++++WD IIP+++ A F+
Sbjct: 70 EVSKIRFNADFDFSRLFNWNTKQVFAYVTAEYEGDENPHTMNEITIWDKIIPSRDNATFT 129
Query: 160 IHTSN-KYRFIDQGHNLRSKEFNLTLHWHVMPKTG 193
+ + KY+ D + + LHW++ P G
Sbjct: 130 LSDIDAKYQLWDLESKITERPLTFKLHWNIQPWFG 164
>sp|Q6C4R5|SPC3_YARLI Microsomal signal peptidase subunit 3 OS=Yarrowia lipolytica
(strain CLIB 122 / E 150) GN=SPC3 PE=3 SV=1
Length = 185
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 56/96 (58%), Gaps = 2/96 (2%)
Query: 100 GNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNAL-NQVSLWDAIIPAKEFAKF 158
G + V+L ++ ADL LF WNTK +F ++ A Y+ ++ + N++++WD II K+ +
Sbjct: 70 GKENVALKFDLDADLSPLFNWNTKLVFAYLTATYDGKRDDIVNEITIWDQIITDKDDSHI 129
Query: 159 SIHTSN-KYRFIDQGHNLRSKEFNLTLHWHVMPKTG 193
+ +N KY D + R++ + LHW++ P G
Sbjct: 130 KLKGANSKYSLYDVEESFRNRNATVKLHWNIQPHVG 165
>sp|Q6BPD6|SPC3_DEBHA Microsomal signal peptidase subunit 3 OS=Debaryomyces hansenii
(strain ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 /
IGC 2968) GN=SPC3 PE=3 SV=2
Length = 190
Score = 66.2 bits (160), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 52/162 (32%), Positives = 83/162 (51%), Gaps = 18/162 (11%)
Query: 49 FGYRANALLTFAVTILALMCAIASL----SDN---LNTPSPS---AQIEI---LNINWFQ 95
F Y AN LT ++ I+A + ++SL S+N L T S S Q+ + N
Sbjct: 8 FQYAANQALTSSI-IIAGIVIVSSLLQLYSNNAWSLGTTSISNIKPQVSLKHSFNYGSVN 66
Query: 96 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKN-ALNQVSLWDAIIPAKE 154
++P N + L DL LF WNTKQLF+++ AEY + + N+++ WD II +KE
Sbjct: 67 RKPKENSRIQFDLE--TDLSPLFNWNTKQLFVYLTAEYPGKSDGSSNKITYWDKIITSKE 124
Query: 155 FAKFSI-HTSNKYRFIDQGHNLRSKEFNLTLHWHVMPKTGKM 195
A S+ + +KY D + R ++ + L W++ P G +
Sbjct: 125 DAVLSLKNQKSKYSVWDIEPSFRQRDAVVKLEWNLQPHIGPL 166
>sp|Q10259|SPC3_SCHPO Probable microsomal signal peptidase subunit 3
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=spc3 PE=3 SV=1
Length = 185
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 41/158 (25%), Positives = 72/158 (45%), Gaps = 12/158 (7%)
Query: 48 SFGYRANALLTFAVTILALMCAIASLSD-------NLNTPSPSAQIEILNINWFQKQPHG 100
+F R + + T+L +CA+ + L+TP + + ++ +
Sbjct: 5 TFTNRGSTFFSKLSTVLFFLCAVITFQGVIQRREVELDTPVYVHYAKYRSARFYHAFRNV 64
Query: 101 NDEVS-LTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKE----F 155
+ + + N+ ADL L+ WNTK + +++ A Y T K+ NQV +WD I+ + E F
Sbjct: 65 RQQYAQVKFNMDADLSELWDWNTKHVVVYLVASYSTEKHEKNQVVVWDKILSSPEESKMF 124
Query: 156 AKFSIHTSNKYRFIDQGHNLRSKEFNLTLHWHVMPKTG 193
K ++ + F + + K TLHW V PK G
Sbjct: 125 MKDTLSNIQAHPFNEYSNQFEGKNATYTLHWTVSPKMG 162
>sp|Q12133|SPC3_YEAST Signal peptidase complex subunit SPC3 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=SPC3 PE=1 SV=1
Length = 184
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 54/100 (54%), Gaps = 2/100 (2%)
Query: 96 KQPHGNDEVSLTLNITADLQSLFTWNTKQLFIFVAAEYETPKNALNQVSLWDAIIPAKEF 155
++ + + + ++ DL LF WNTKQ+F+++ AEY + + ++V+ WD II +K+
Sbjct: 64 QRGKAKENMKIKFDLNTDLTPLFNWNTKQVFVYLTAEYNSTEKITSEVTFWDKIIKSKDD 123
Query: 156 AKFSIHT-SNKYRFID-QGHNLRSKEFNLTLHWHVMPKTG 193
A ++ +KY D + K+ LHW+V P G
Sbjct: 124 AVIDVNDLRSKYSIWDIEDGKFEGKDLVFKLHWNVQPWVG 163
>sp|P96712|BMR3_BACSU Multidrug resistance protein 3 OS=Bacillus subtilis (strain 168)
GN=bmr3 PE=1 SV=1
Length = 512
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 22/63 (34%), Positives = 28/63 (44%), Gaps = 10/63 (15%)
Query: 7 IWQNSFIFIS---VDFNFSLRPKIKRQQLQQR-QGTKTGKKKKMHSFGYRANALLTFAVT 62
+W F+ IS V FNFSL P L+ R +GT + SFG +T VT
Sbjct: 358 VWLTVFMMISGFGVGFNFSLLPAASMNDLEPRFRGTANSTNSFLRSFG------MTLGVT 411
Query: 63 ILA 65
I
Sbjct: 412 IFG 414
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.133 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 74,571,238
Number of Sequences: 539616
Number of extensions: 2799092
Number of successful extensions: 5855
Number of sequences better than 100.0: 24
Number of HSP's better than 100.0 without gapping: 19
Number of HSP's successfully gapped in prelim test: 5
Number of HSP's that attempted gapping in prelim test: 5817
Number of HSP's gapped (non-prelim): 24
length of query: 212
length of database: 191,569,459
effective HSP length: 112
effective length of query: 100
effective length of database: 131,132,467
effective search space: 13113246700
effective search space used: 13113246700
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)