Your job contains 1 sequence.
>028227
MEIIAGTTATTMATQSITPKGLKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIA
DDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYY
YFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSAN
LYEISGTFKTWNIIMDRRSSRHGSKNGPQRIS
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028227
(212 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2088469 - symbol:SKL1 "shikimate kinase-like 1... 422 1.4e-39 1
UNIPROTKB|Q5NTH3 - symbol:SK2 "Shikimate kinase 2, chloro... 210 4.1e-17 1
UNIPROTKB|Q7X7H9 - symbol:SK3 "Shikimate kinase 3, chloro... 209 5.3e-17 1
UNIPROTKB|Q5NTH4 - symbol:SK1 "Shikimate kinase 1, chloro... 205 1.4e-16 1
TAIR|locus:2052586 - symbol:SK1 "shikimate kinase 1" spec... 192 4.3e-15 1
TIGR_CMR|GSU_2026 - symbol:GSU_2026 "shikimate kinase" sp... 125 1.6e-07 1
UNIPROTKB|Q9KNV1 - symbol:aroK "Shikimate kinase" species... 124 2.2e-07 1
TIGR_CMR|VC_2629 - symbol:VC_2629 "shikimate kinase" spec... 124 2.2e-07 1
TIGR_CMR|CBU_1892 - symbol:CBU_1892 "shikimate kinase" sp... 125 2.9e-07 1
TIGR_CMR|SO_0286 - symbol:SO_0286 "shikimate kinase" spec... 121 6.2e-07 1
TIGR_CMR|CPS_0472 - symbol:CPS_0472 "shikimate kinase" sp... 119 1.8e-06 1
UNIPROTKB|P0A6D7 - symbol:aroK "shikimate kinase I" speci... 112 2.8e-05 1
TIGR_CMR|SPO_1634 - symbol:SPO_1634 "shikimate kinase" sp... 107 0.00025 1
>TAIR|locus:2088469 [details] [associations]
symbol:SKL1 "shikimate kinase-like 1" species:3702
"Arabidopsis thaliana" [GO:0004765 "shikimate kinase activity"
evidence=IEA;IDA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009507 "chloroplast" evidence=ISM;IDA] [GO:0009073 "aromatic
amino acid family biosynthetic process" evidence=RCA;TAS]
[GO:0009570 "chloroplast stroma" evidence=IDA] [GO:0009658
"chloroplast organization" evidence=IMP] [GO:0010027 "thylakoid
membrane organization" evidence=IMP] [GO:0000096 "sulfur amino acid
metabolic process" evidence=RCA] [GO:0006520 "cellular amino acid
metabolic process" evidence=RCA] [GO:0006546 "glycine catabolic
process" evidence=RCA] [GO:0006569 "tryptophan catabolic process"
evidence=RCA] [GO:0006636 "unsaturated fatty acid biosynthetic
process" evidence=RCA] [GO:0006733 "oxidoreduction coenzyme
metabolic process" evidence=RCA] [GO:0006766 "vitamin metabolic
process" evidence=RCA] [GO:0008652 "cellular amino acid
biosynthetic process" evidence=RCA] [GO:0009072 "aromatic amino
acid family metabolic process" evidence=RCA] [GO:0009106 "lipoate
metabolic process" evidence=RCA] [GO:0009108 "coenzyme biosynthetic
process" evidence=RCA] [GO:0009117 "nucleotide metabolic process"
evidence=RCA] [GO:0009684 "indoleacetic acid biosynthetic process"
evidence=RCA] [GO:0009695 "jasmonic acid biosynthetic process"
evidence=RCA] [GO:0009965 "leaf morphogenesis" evidence=RCA]
[GO:0015995 "chlorophyll biosynthetic process" evidence=RCA]
[GO:0016226 "iron-sulfur cluster assembly" evidence=RCA]
[GO:0019288 "isopentenyl diphosphate biosynthetic process,
mevalonate-independent pathway" evidence=RCA] [GO:0019344 "cysteine
biosynthetic process" evidence=RCA] [GO:0019748 "secondary
metabolic process" evidence=RCA] [GO:0030154 "cell differentiation"
evidence=RCA] [GO:0044272 "sulfur compound biosynthetic process"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009570 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0009658 GO:GO:0010027 GO:GO:0016301 EMBL:AB016889
PRINTS:PR01100 PROSITE:PS01128 eggNOG:COG0703 EMBL:AK318791
EMBL:BT012132 EMBL:BT012407 IPI:IPI00542597 RefSeq:NP_001118711.1
RefSeq:NP_001118712.1 RefSeq:NP_189325.2 UniGene:At.37144
ProteinModelPortal:Q9LW20 SMR:Q9LW20 IntAct:Q9LW20 STRING:Q9LW20
PaxDb:Q9LW20 PRIDE:Q9LW20 EnsemblPlants:AT3G26900.1
EnsemblPlants:AT3G26900.2 EnsemblPlants:AT3G26900.3 GeneID:822306
KEGG:ath:AT3G26900 TAIR:At3g26900 HOGENOM:HOG000077619
InParanoid:Q9LW20 OMA:IWIDVPL PhylomeDB:Q9LW20
ProtClustDB:CLSN2680173 Genevestigator:Q9LW20 Uniprot:Q9LW20
Length = 280
Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
Identities = 88/155 (56%), Positives = 114/155 (73%)
Query: 38 PIRTSLQYSIISRKPRIT-TRSIADDTTSNTVTKVAAEDPSFAVKKKAADISTELKGTSV 96
P+ +S +IS RI +RS+AD + S ++ V DP VK+KA DI+ ELKG S+
Sbjct: 34 PLLSSSSTRLISCHSRIAPSRSLADQSASTGIS-VVDSDPIDVVKRKAMDIAPELKGASI 92
Query: 97 FLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAETEV 156
FLVG+NN+IKT+ GK LA+ALRYYYFDSD+L+ EAAGG +A+A +E+DEK +Q++ETEV
Sbjct: 93 FLVGINNSIKTNTGKLLAEALRYYYFDSDNLITEAAGGNVSAQALKEADEKAFQESETEV 152
Query: 157 LKQLSSMGRLVVCAGNGAVQSSANLYEISGTFKTW 191
LKQLSSMGRLVVCAG+GAVQS NL + W
Sbjct: 153 LKQLSSMGRLVVCAGDGAVQSLRNLALLRHGISIW 187
>UNIPROTKB|Q5NTH3 [details] [associations]
symbol:SK2 "Shikimate kinase 2, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008212 GO:GO:0004765
GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
GO:GO:0019632 KO:K00891 BRENDA:2.7.1.71 EMBL:AB188835 EMBL:AP003513
RefSeq:NP_001057199.2 UniGene:Os.56273 ProteinModelPortal:Q5NTH3
STRING:Q5NTH3 EnsemblPlants:LOC_Os06g12150.1 GeneID:4340547
KEGG:osa:4340547 Gramene:Q5NTH3 OMA:HENSHNS ProtClustDB:CLSN2696071
Uniprot:Q5NTH3
Length = 307
Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
Identities = 50/138 (36%), Positives = 78/138 (56%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ + K LA+ L Y +FDSD LV +A G
Sbjct: 76 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVAKILAEVLGYSFFDSDKLVEQAVGM 135
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLYEISGTFKTW-NI 193
S A+ F+E E ++ E+ VL+ LSSM RLVV G GAV N + W ++
Sbjct: 136 PSVAQIFKEHSEAFFRDNESSVLRDLSSMRRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 195
Query: 194 IMD---RRSSRHGSKNGP 208
+D RR ++ G+ + P
Sbjct: 196 PLDALARRIAQVGTASRP 213
>UNIPROTKB|Q7X7H9 [details] [associations]
symbol:SK3 "Shikimate kinase 3, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008210 EMBL:CM000141
GO:GO:0004765 GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 KO:K00891 BRENDA:2.7.1.71
EMBL:AB188836 EMBL:AL606455 EMBL:AL606649 RefSeq:NP_001054037.2
UniGene:Os.7634 HSSP:P24167 ProteinModelPortal:Q7X7H9 STRING:Q7X7H9
EnsemblPlants:LOC_Os04g54800.1 GeneID:4337165 KEGG:osa:4337165
Gramene:Q7X7H9 OMA:KEDGMAR Uniprot:Q7X7H9
Length = 287
Score = 209 (78.6 bits), Expect = 5.3e-17, P = 5.3e-17
Identities = 53/138 (38%), Positives = 77/138 (55%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+KA D+ L ++LVGM + KT +GK LA+ L Y +FDSD LV +A G
Sbjct: 73 DEALVLKQKAEDVVPYLNDRCIYLVGMMGSGKTTVGKILAEVLGYSFFDSDKLVEKAVGI 132
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLYEISGTFKTW-NI 193
S A+ F+ E ++ E+EVL+ LSSM RLVV G GAV N + W ++
Sbjct: 133 SSVAEIFQLHSEAFFRDNESEVLRDLSSMHRLVVATGGGAVIRPINWSYMKKGSTIWLDV 192
Query: 194 IMD---RRSSRHGSKNGP 208
+D RR + G+ + P
Sbjct: 193 PLDALARRIAAVGTASRP 210
>UNIPROTKB|Q5NTH4 [details] [associations]
symbol:SK1 "Shikimate kinase 1, chloroplastic"
species:39947 "Oryza sativa Japonica Group" [GO:0004765 "shikimate
kinase activity" evidence=IDA] [GO:0009073 "aromatic amino acid
family biosynthetic process" evidence=IDA] [GO:0009507
"chloroplast" evidence=IDA] [GO:0009536 "plastid" evidence=IDA]
[GO:0019632 "shikimate metabolic process" evidence=IDA]
HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009536 EMBL:AP008208 GO:GO:0004765
GO:GO:0009073 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
GO:GO:0019632 KO:K00891 EMBL:AB188834 EMBL:AP005848
RefSeq:NP_001048125.1 ProteinModelPortal:Q5NTH4 STRING:Q5NTH4
GeneID:4330732 KEGG:dosa:Os02t0749300-01 KEGG:dosa:Os06t0225800-01
KEGG:osa:4330732 Gramene:Q5NTH4 OMA:YTMAFSK BRENDA:2.7.1.71
Uniprot:Q5NTH4
Length = 308
Score = 205 (77.2 bits), Expect = 1.4e-16, P = 1.4e-16
Identities = 48/138 (34%), Positives = 78/138 (56%)
Query: 75 DPSFAVKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGG 134
D + +K+K+ ++ L G ++LVGM + K+ +GK +++ L Y +FDSD LV +A G
Sbjct: 78 DEALLLKRKSEEVLFYLNGRCIYLVGMMGSGKSTVGKIMSEVLGYSFFDSDKLVEQAVGM 137
Query: 135 ESAAKAFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSANLYEISGTFKTW-NI 193
S A+ F+ E ++ E+ VL+ LSSM RLVV G GAV N + W ++
Sbjct: 138 PSVAQIFKVHSEAFFRDNESSVLRDLSSMKRLVVATGGGAVIRPVNWKYMKKGLSVWLDV 197
Query: 194 IMD---RRSSRHGSKNGP 208
+D RR ++ G+ + P
Sbjct: 198 PLDALARRIAKVGTASRP 215
>TAIR|locus:2052586 [details] [associations]
symbol:SK1 "shikimate kinase 1" species:3702 "Arabidopsis
thaliana" [GO:0004765 "shikimate kinase activity" evidence=IEA;IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0009507 "chloroplast"
evidence=ISM;TAS] [GO:0019632 "shikimate metabolic process"
evidence=IDA] [GO:0006744 "ubiquinone biosynthetic process"
evidence=RCA] HAMAP:MF_00109 InterPro:IPR000623 Pfam:PF01202
GO:GO:0005524 GO:GO:0009507 EMBL:CP002685 GO:GO:0046872
GO:GO:0004765 GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100
PROSITE:PS01128 InterPro:IPR023000 GO:GO:0019632 KO:K00891
OMA:YTMAFSK UniGene:At.47529 UniGene:At.50089 IPI:IPI00529386
RefSeq:NP_001077937.1 ProteinModelPortal:F4IIJ2 SMR:F4IIJ2
PRIDE:F4IIJ2 EnsemblPlants:AT2G21940.4 GeneID:816730
KEGG:ath:AT2G21940 Uniprot:F4IIJ2
Length = 304
Score = 192 (72.6 bits), Expect = 4.3e-15, P = 4.3e-15
Identities = 52/156 (33%), Positives = 83/156 (53%)
Query: 22 LKFDPPFSLLHSQSYAPIRTSLQYSIISRKPRITTRSIADDTTSNTVTKVAAEDP--SFA 79
+K D F L P R + Q +S P + S +D+ +S + + + P
Sbjct: 35 VKVDRRFRGLSLARLQPERRNDQRRAVS--PAV---SCSDNNSSGALLETGSVYPFDEDI 89
Query: 80 VKKKAADISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAK 139
+K+KA ++ L G S++LVGM + KT +GK ++ L Y +FD D+L+ +A G S A+
Sbjct: 90 LKRKAEEVKPYLNGRSMYLVGMMGSGKTTVGKLMSKVLGYTFFDCDTLIEQAMNGTSVAE 149
Query: 140 AFRESDEKGYQQAETEVLKQLSSMGRLVVCAGNGAV 175
F E ++ ET+ LK+LSS ++VV G GAV
Sbjct: 150 IFVHHGENFFRGKETDALKKLSSRYQVVVSTGGGAV 185
>TIGR_CMR|GSU_2026 [details] [associations]
symbol:GSU_2026 "shikimate kinase" species:243231
"Geobacter sulfurreducens PCA" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE017180 GenomeReviews:AE017180_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF RefSeq:NP_953075.2 ProteinModelPortal:Q74BL5
GeneID:2686093 KEGG:gsu:GSU2026 PATRIC:22026913
ProtClustDB:CLSK828692 BioCyc:GSUL243231:GH27-2060-MONOMER
Uniprot:Q74BL5
Length = 175
Score = 125 (49.1 bits), Expect = 1.6e-07, P = 1.6e-07
Identities = 32/94 (34%), Positives = 48/94 (51%)
Query: 87 ISTELKGTSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDE 146
+S G +V L G K+ +GK LA L Y + D D+L+ E AG S + F E
Sbjct: 1 MSVPSDGRNVVLTGFMGTGKSTVGKLLARRLGYRFSDLDALIVERAG-ISINEIFERYGE 59
Query: 147 KGYQQAETEVLKQLSSMGRLVVCAGNGAVQSSAN 180
+ +++ ETE ++ L + VV G GAV + N
Sbjct: 60 QRFRELETEAIRSLGGVSGRVVATGGGAVIAPRN 93
>UNIPROTKB|Q9KNV1 [details] [associations]
symbol:aroK "Shikimate kinase" species:243277 "Vibrio
cholerae O1 biovar El Tor str. N16961" [GO:0004765 "shikimate
kinase activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 KO:K00891 OMA:ADIPWIF
ProtClustDB:PRK05057 PIR:C82053 RefSeq:NP_232257.1
ProteinModelPortal:Q9KNV1 SMR:Q9KNV1 DNASU:2615646 GeneID:2615646
KEGG:vch:VC2629 PATRIC:20084282 Uniprot:Q9KNV1
Length = 174
Score = 124 (48.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLYEIS 185
V+ L+ +V+ G G+V S N +S
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLS 95
>TIGR_CMR|VC_2629 [details] [associations]
symbol:VC_2629 "shikimate kinase" species:686 "Vibrio
cholerae O1 biovar El Tor" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE003852 GenomeReviews:AE003852_GR GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 KO:K00891 OMA:ADIPWIF ProtClustDB:PRK05057
PIR:C82053 RefSeq:NP_232257.1 ProteinModelPortal:Q9KNV1 SMR:Q9KNV1
DNASU:2615646 GeneID:2615646 KEGG:vch:VC2629 PATRIC:20084282
Uniprot:Q9KNV1
Length = 174
Score = 124 (48.7 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 29/91 (31%), Positives = 49/91 (53%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD+++ E G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQQLHMEFIDSDTVIEERTGAD-IAWVFDVEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLYEIS 185
V+ L+ +V+ G G+V S N +S
Sbjct: 65 AVINDLTEQQGIVLATGGGSVISKENRNRLS 95
>TIGR_CMR|CBU_1892 [details] [associations]
symbol:CBU_1892 "shikimate kinase" species:227377
"Coxiella burnetii RSA 493" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 GO:GO:0046872
EMBL:AE016828 GenomeReviews:AE016828_GR GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
RefSeq:NP_820869.1 PDB:3TRF PDBsum:3TRF ProteinModelPortal:Q83AJ3
GeneID:1209805 KEGG:cbu:CBU_1892 PATRIC:17932517
ProtClustDB:CLSK915106 BioCyc:CBUR227377:GJ7S-1867-MONOMER
EvolutionaryTrace:Q83AJ3 Uniprot:Q83AJ3
Length = 179
Score = 125 (49.1 bits), Expect = 2.9e-07, P = 2.9e-07
Identities = 35/121 (28%), Positives = 59/121 (48%)
Query: 94 TSVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAE 153
T+++L+G+ A KT +G LA + +DSD + E G A F E G+++ E
Sbjct: 6 TNIYLIGLMGAGKTSVGSQLAKLTKRILYDSDKEI-EKRTGADIAWIFEMEGEAGFRRRE 64
Query: 154 TEVLKQLSSMGRLVVCAGNGAVQSSANLYEISGT----FKTWNIIMDRRSSRHGSKNGPQ 209
E+++ L + +++ G G V N +IS T + T +I D + R G K +
Sbjct: 65 REMIEALCKLDNIILATGGGVVLDEKNRQQISETGVVIYLTASI--DTQLKRIGQKGEMR 122
Query: 210 R 210
R
Sbjct: 123 R 123
>TIGR_CMR|SO_0286 [details] [associations]
symbol:SO_0286 "shikimate kinase" species:211586
"Shewanella oneidensis MR-1" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:AE014299 GenomeReviews:AE014299_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF ProtClustDB:PRK05057 RefSeq:NP_715926.1
ProteinModelPortal:Q8EK20 SMR:Q8EK20 GeneID:1168168
KEGG:son:SO_0286 PATRIC:23520279 Uniprot:Q8EK20
Length = 171
Score = 121 (47.7 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/83 (33%), Positives = 46/83 (55%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L + DSD + + G + A F E+G+++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRHLAQMLHLEFHDSDQEIEQRTGAD-IAWVFDVEGEEGFRRREA 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS 177
+V+ LS +V+ G G+VQS
Sbjct: 65 QVIADLSEKQGIVLATGGGSVQS 87
>TIGR_CMR|CPS_0472 [details] [associations]
symbol:CPS_0472 "shikimate kinase" species:167879
"Colwellia psychrerythraea 34H" [GO:0004765 "shikimate kinase
activity" evidence=ISS] [GO:0009423 "chorismate biosynthetic
process" evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053
InterPro:IPR000623 Pfam:PF01202 GO:GO:0005524 GO:GO:0005737
GO:GO:0046872 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0004765
GO:GO:0009073 GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128
InterPro:IPR023000 RefSeq:YP_267230.1 ProteinModelPortal:Q489N4
SMR:Q489N4 STRING:Q489N4 GeneID:3520280 KEGG:cps:CPS_0472
PATRIC:21464297 eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891
OMA:ADIPWIF BioCyc:CPSY167879:GI48-567-MONOMER Uniprot:Q489N4
Length = 172
Score = 119 (46.9 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/84 (33%), Positives = 47/84 (55%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FL+G A K+ +G+ +AD L +FDSD + E G A F E+G+++ E
Sbjct: 6 NIFLIGPMGAGKSTIGREIADRLHLEFFDSDQEI-ERRTGADIAWVFDLEGEEGFRKREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSS 178
V++ LS +V+ G G+V S+
Sbjct: 65 TVIEDLSEKHGIVLATGGGSVIST 88
>UNIPROTKB|P0A6D7 [details] [associations]
symbol:aroK "shikimate kinase I" species:83333 "Escherichia
coli K-12" [GO:0016310 "phosphorylation" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016740 "transferase
activity" evidence=IEA] [GO:0016301 "kinase activity" evidence=IEA]
[GO:0009073 "aromatic amino acid family biosynthetic process"
evidence=IEA] [GO:0008652 "cellular amino acid biosynthetic
process" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0004765 "shikimate kinase activity"
evidence=IEA] [GO:0009423 "chorismate biosynthetic process"
evidence=IEA] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0046872
EMBL:U18997 GO:GO:0004765 GO:GO:0009073 GO:GO:0009423
PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000 EMBL:Z19601
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
EMBL:M76389 EMBL:X80167 EMBL:L39822 PIR:A65134 RefSeq:YP_026215.2
RefSeq:YP_492042.1 PDB:1KAG PDBsum:1KAG ProteinModelPortal:P0A6D7
SMR:P0A6D7 DIP:DIP-48271N IntAct:P0A6D7 MINT:MINT-1299909
SWISS-2DPAGE:P0A6D7 PRIDE:P0A6D7 EnsemblBacteria:EBESCT00000004465
EnsemblBacteria:EBESCT00000004466 EnsemblBacteria:EBESCT00000018087
GeneID:12930303 GeneID:2847759 KEGG:ecj:Y75_p3786 KEGG:eco:b3390
PATRIC:32122212 EchoBASE:EB0079 EcoGene:EG10081
ProtClustDB:PRK05057 BioCyc:EcoCyc:AROK-MONOMER
BioCyc:ECOL316407:JW5947-MONOMER BioCyc:MetaCyc:AROK-MONOMER
EvolutionaryTrace:P0A6D7 Genevestigator:P0A6D7 Uniprot:P0A6D7
Length = 173
Score = 112 (44.5 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 26/83 (31%), Positives = 45/83 (54%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
++FLVG A K+ +G+ LA L ++DSD + E G F E+G++ E
Sbjct: 6 NIFLVGPMGAGKSTIGRQLAQQLNMEFYDSDQEI-EKRTGADVGWVFDLEGEEGFRDREE 64
Query: 155 EVLKQLSSMGRLVVCAGNGAVQS 177
+V+ +L+ +V+ G G+V+S
Sbjct: 65 KVINELTEKQGIVLATGGGSVKS 87
>TIGR_CMR|SPO_1634 [details] [associations]
symbol:SPO_1634 "shikimate kinase" species:246200
"Ruegeria pomeroyi DSS-3" [GO:0004765 "shikimate kinase activity"
evidence=ISS] [GO:0009423 "chorismate biosynthetic process"
evidence=ISS] HAMAP:MF_00109 UniPathway:UPA00053 InterPro:IPR000623
Pfam:PF01202 GO:GO:0005524 GO:GO:0005737 EMBL:CP000031
GenomeReviews:CP000031_GR GO:GO:0046872 GO:GO:0004765 GO:GO:0009073
GO:GO:0009423 PRINTS:PR01100 PROSITE:PS01128 InterPro:IPR023000
eggNOG:COG0703 HOGENOM:HOG000032568 KO:K00891 OMA:ADIPWIF
RefSeq:YP_166875.1 ProteinModelPortal:Q5LSY0 GeneID:3194890
KEGG:sil:SPO1634 PATRIC:23376593 ProtClustDB:PRK13946
Uniprot:Q5LSY0
Length = 195
Score = 107 (42.7 bits), Expect = 0.00025, P = 0.00025
Identities = 30/91 (32%), Positives = 46/91 (50%)
Query: 95 SVFLVGMNNAIKTHLGKFLADALRYYYFDSDSLVFEAAGGESAAKAFRESDEKGYQQAET 154
+V +VGM A KT +G+ LA L + DSD+ + E+A S + F E ++ E+
Sbjct: 22 TVVMVGMMGAGKTAVGRALAQRLGVPFLDSDAEI-ESAANMSIPEIFERDGEAFFRDRES 80
Query: 155 EVLKQLSSMGRLVVCAGNGAVQSSANLYEIS 185
V+ +L V+ G GA + AN IS
Sbjct: 81 RVIARLLEGAPCVLSTGGGAFLAEANRRMIS 111
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.314 0.128 0.355 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 212 196 0.00080 111 3 11 23 0.37 33
31 0.44 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 13
No. of states in DFA: 592 (63 KB)
Total size of DFA: 144 KB (2088 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.51u 0.08s 17.59t Elapsed: 00:00:03
Total cpu time: 17.51u 0.08s 17.59t Elapsed: 00:00:03
Start: Fri May 10 08:25:31 2013 End: Fri May 10 08:25:34 2013