Query 028228
Match_columns 212
No_of_seqs 251 out of 1331
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 13:21:26 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028228.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028228hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 4eld_A MJ16.5-P1, small heat s 100.0 8.4E-28 2.9E-32 193.4 13.3 104 82-187 55-161 (161)
2 1gme_A Heat shock protein 16.9 100.0 1.7E-28 5.8E-33 195.9 9.0 105 81-187 41-150 (151)
3 3gla_A Low molecular weight he 99.9 4.5E-27 1.6E-31 174.6 13.8 98 81-180 2-99 (100)
4 4fei_A Heat shock protein-rela 99.9 7.1E-26 2.4E-30 169.3 12.1 96 81-183 4-99 (102)
5 2klr_A Alpha-crystallin B chai 99.9 1.5E-25 5.1E-30 183.0 11.2 99 83-190 63-165 (175)
6 3aab_A Putative uncharacterize 99.9 1.6E-25 5.3E-30 172.6 10.2 97 83-186 24-122 (123)
7 3l1e_A Alpha-crystallin A chai 99.9 3.7E-24 1.3E-28 161.2 14.8 96 83-187 2-105 (106)
8 2wj5_A Heat shock protein beta 99.9 1.1E-23 3.8E-28 157.3 12.4 95 84-187 2-99 (101)
9 3q9p_A Heat shock protein beta 99.9 4.1E-23 1.4E-27 149.6 11.1 83 88-179 2-85 (85)
10 2bol_A TSP36, small heat shock 99.9 6.3E-22 2.2E-26 174.7 11.8 99 82-190 97-201 (314)
11 2y1y_A Alpha-crystallin B chai 99.9 2.7E-21 9.1E-26 141.3 12.0 83 90-181 3-86 (90)
12 2bol_A TSP36, small heat shock 99.8 8.7E-20 3E-24 161.0 11.4 89 84-178 221-313 (314)
13 1rl1_A Suppressor of G2 allele 99.1 7.9E-10 2.7E-14 83.1 9.8 82 82-180 8-89 (114)
14 2xcm_C SGT1-like protein, cyto 99.0 1.1E-09 3.7E-14 79.0 9.1 81 83-180 2-82 (92)
15 3eud_A Protein SHQ1; CS domain 98.0 8.2E-05 2.8E-09 56.0 11.3 80 81-181 15-98 (115)
16 2k8q_A Protein SHQ1; beta-sand 98.0 1.2E-05 4.2E-10 62.3 6.6 77 83-180 3-83 (134)
17 1x5m_A Calcyclin-binding prote 97.9 0.00024 8.3E-09 54.0 11.7 81 83-180 20-104 (127)
18 1wh0_A Ubiquitin carboxyl-term 97.8 0.00012 4.2E-09 56.6 9.9 89 82-180 18-112 (134)
19 1wgv_A KIAA1068 protein; CS do 97.7 0.00072 2.5E-08 51.2 12.7 83 82-180 18-102 (124)
20 2o30_A Nuclear movement protei 97.6 0.00045 1.5E-08 52.9 10.2 77 83-180 4-81 (131)
21 3igf_A ALL4481 protein; two-do 97.6 0.0002 6.8E-09 64.1 9.4 72 83-178 297-369 (374)
22 1ejf_A Progesterone receptor P 97.6 0.00053 1.8E-08 52.0 9.5 78 85-180 5-82 (125)
23 2rh0_A NUDC domain-containing 97.5 0.0011 3.8E-08 52.4 11.0 79 82-180 12-91 (157)
24 1wfi_A Nuclear distribution ge 97.5 0.0012 4.2E-08 50.3 10.5 80 82-180 6-88 (131)
25 3qor_A Nuclear migration prote 97.4 0.0014 4.8E-08 49.5 10.1 81 81-180 14-97 (121)
26 2kmw_A Uncharacterized protein 97.3 0.00091 3.1E-08 52.5 7.9 78 83-180 4-82 (150)
27 2cg9_X CO-chaperone protein SB 97.0 0.00037 1.3E-08 53.7 3.5 83 83-179 6-97 (134)
28 4fei_A Heat shock protein-rela 79.5 6.8 0.00023 27.7 6.9 35 94-129 62-97 (102)
29 3q9p_A Heat shock protein beta 74.1 6.2 0.00021 27.1 5.2 34 144-179 7-40 (85)
30 3gla_A Low molecular weight he 71.6 7.2 0.00025 27.2 5.2 34 93-127 64-98 (100)
31 3l1e_A Alpha-crystallin A chai 67.1 8.4 0.00029 27.5 4.8 35 94-129 56-92 (106)
32 4eld_A MJ16.5-P1, small heat s 66.8 11 0.00038 28.9 5.7 34 94-128 118-152 (161)
33 2wj5_A Heat shock protein beta 65.0 10 0.00034 26.9 4.8 33 95-128 56-90 (101)
34 2y1y_A Alpha-crystallin B chai 64.6 11 0.00039 25.9 4.9 33 144-178 6-38 (90)
35 3aab_A Putative uncharacterize 59.1 20 0.00067 26.1 5.6 34 145-180 35-69 (123)
36 1gme_A Heat shock protein 16.9 58.9 21 0.00071 27.1 5.9 34 94-128 105-139 (151)
37 2klr_A Alpha-crystallin B chai 52.7 15 0.00051 28.9 4.2 32 95-127 118-151 (175)
38 2cql_A OK/SW-CL.103, 60S ribos 47.7 33 0.0011 24.4 5.0 19 106-125 20-38 (100)
39 1rl6_A Protein (ribosomal prot 39.6 59 0.002 25.6 5.8 46 106-178 11-56 (177)
40 1nkw_E 50S ribosomal protein L 38.4 69 0.0024 26.1 6.1 46 106-178 39-84 (212)
41 3oeq_A Frataxin homolog, mitoc 35.3 54 0.0018 24.4 4.6 28 161-192 49-76 (123)
42 1vq8_E 50S ribosomal protein L 35.0 73 0.0025 25.1 5.6 46 106-177 9-54 (178)
43 3j21_F 50S ribosomal protein L 33.1 66 0.0023 25.5 5.1 19 106-125 14-32 (184)
44 2kgs_A Uncharacterized protein 32.0 35 0.0012 25.3 3.2 26 101-127 2-27 (132)
45 1rl1_A Suppressor of G2 allele 31.5 61 0.0021 22.8 4.3 35 92-127 53-88 (114)
46 1ew4_A CYAY protein; friedreic 29.7 34 0.0012 24.7 2.7 25 160-188 29-53 (106)
47 2nwt_A UPF0165 protein AF_2212 29.7 35 0.0012 22.9 2.5 14 159-173 3-16 (69)
48 2ks0_A Uncharacterized protein 29.1 32 0.0011 23.2 2.2 23 103-126 17-39 (71)
49 2uwa_A Cellulase; glycoside hy 27.5 1.2E+02 0.004 25.3 6.0 44 105-155 31-74 (274)
50 2o30_A Nuclear movement protei 27.4 75 0.0026 23.2 4.3 31 145-176 15-45 (131)
51 3v2d_H 50S ribosomal protein L 25.7 1.3E+02 0.0044 23.6 5.6 43 106-175 12-54 (180)
52 3h0x_A 78 kDa glucose-regulate 24.6 2.2E+02 0.0075 21.2 6.7 40 85-125 48-101 (152)
53 3iz5_F 60S ribosomal protein L 23.6 1.7E+02 0.0058 23.2 6.0 19 106-125 13-31 (190)
54 3iln_A Laminarinase; jelly ROW 23.3 2E+02 0.0068 23.2 6.6 41 111-155 49-97 (251)
55 2op6_A Heat shock 70 kDa prote 22.2 2.4E+02 0.0081 20.8 6.4 40 84-124 47-100 (152)
56 2zkr_e 60S ribosomal protein L 21.6 1.3E+02 0.0043 24.0 4.9 19 106-125 13-31 (192)
57 3bbo_I Ribosomal protein L6; l 20.7 43 0.0015 27.5 1.9 47 106-178 54-100 (223)
58 1wgv_A KIAA1068 protein; CS do 20.7 1.2E+02 0.004 21.8 4.2 32 144-176 29-61 (124)
59 4awd_A Beta-porphyranase; hydr 20.5 1.3E+02 0.0043 25.8 5.0 48 105-155 85-145 (324)
60 1q5l_A Chaperone protein DNAK; 20.5 2.5E+02 0.0087 20.4 7.1 43 84-126 64-119 (135)
61 3jx8_A Putative lipoprotein; s 20.2 1.1E+02 0.0037 24.7 4.3 43 83-126 31-73 (250)
62 3dob_A Heat shock 70 kDa prote 20.1 2E+02 0.007 21.5 5.7 40 85-125 48-101 (152)
63 2w39_A Putative laminarinase; 20.1 2.1E+02 0.0073 24.0 6.3 13 143-155 82-95 (298)
No 1
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=99.95 E-value=8.4e-28 Score=193.40 Aligned_cols=104 Identities=21% Similarity=0.257 Sum_probs=93.1
Q ss_pred CCCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEE-EeeeEEEEEECCCCcccCC
Q 028228 82 GQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHW-WEHGFVRRLELPEDADWRK 160 (212)
Q Consensus 82 ~~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~-~~g~F~R~~~LP~~vd~~~ 160 (212)
..+++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+...++..|++.|+ .+|.|.|+|.||.+||.++
T Consensus 55 ~~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~~LP~~vd~~~ 133 (161)
T 4eld_A 55 GFMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGD-TLEIRAKRSPLMITESERIIYSEIPEEEEIYRTIKLPATVKEEN 133 (161)
T ss_dssp SCCCEEEEECSSEEEEEEECTTCCGGGEEEEEETT-EEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEEECSSCBCGGG
T ss_pred cccceeEEEeCCEEEEEEECCCCChHhEEEEEECC-EEEEEEEEcccccCCCceEEEEEeeccccEEEEEECCCCccccc
Confidence 34559999999999999999999999999999998 899999998765445557888888 8899999999999999999
Q ss_pred eEEEEeCCCEEEEEEeCCCC--Cceeecc
Q 028228 161 TEAYLSNDVFLEIRIPKNPS--TCDISHG 187 (212)
Q Consensus 161 i~A~~~nGgvL~I~lPK~~~--~r~I~I~ 187 (212)
|+|+|+|| ||+|++||.+. +++|+|+
T Consensus 134 i~A~~~nG-vL~I~lpK~~~~~~r~I~Ie 161 (161)
T 4eld_A 134 ASAKFENG-VLSVILPKAESSIKKGINIE 161 (161)
T ss_dssp CEEEEETT-EEEEEEEBCGGGSCCCCCCC
T ss_pred EEEEEECC-EEEEEEEcCCCCCCcEeecC
Confidence 99999999 99999999875 6778774
No 2
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=99.95 E-value=1.7e-28 Score=195.85 Aligned_cols=105 Identities=32% Similarity=0.543 Sum_probs=94.1
Q ss_pred CCCCceeEEEcCceEEEEEecCCCCcCcEEEEEe-CCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccC
Q 028228 81 TGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVE-NGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWR 159 (212)
Q Consensus 81 ~~~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~ 159 (212)
.+.|++||+|++++|+|.++|||++++||+|++. ++ .|+|+|+++.+.+.++..|++.|+.+|+|.|+|.||.+||.+
T Consensus 41 ~~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~-~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~~LP~~vd~~ 119 (151)
T 1gme_A 41 FANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGN-VLVVSGERTKEKEDKNDKWHRVERSSGKFVRRFRLLEDAKVE 119 (151)
T ss_dssp HGGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTT-EEEEEECCCCCCCCTTCEEEECCCCCCCEEEEEECSSCCCGG
T ss_pred ccCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCC-EEEEEEEEccccccCCceEEEEeEeccEEEEEEECCCCcccc
Confidence 4569999999999999999999999999999996 55 899999998876666678999999999999999999999999
Q ss_pred CeEEEEeCCCEEEEEEeCCCC----Cceeecc
Q 028228 160 KTEAYLSNDVFLEIRIPKNPS----TCDISHG 187 (212)
Q Consensus 160 ~i~A~~~nGgvL~I~lPK~~~----~r~I~I~ 187 (212)
+|+|+|+|| ||+|++||.+. .++|+|+
T Consensus 120 ~i~A~~~nG-vL~I~lPK~~~~~~~~~~I~I~ 150 (151)
T 1gme_A 120 EVKAGLENG-VLTVTVPKAEVKKPEVKAIQIS 150 (151)
T ss_dssp GCEEEEETT-EEEEEEECCCCCTTCCCCCCCC
T ss_pred ceEEEEECC-EEEEEEEccCcCCCCCeEeeeC
Confidence 999999999 99999999875 2566664
No 3
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=99.95 E-value=4.5e-27 Score=174.62 Aligned_cols=98 Identities=33% Similarity=0.497 Sum_probs=89.7
Q ss_pred CCCCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCC
Q 028228 81 TGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRK 160 (212)
Q Consensus 81 ~~~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~ 160 (212)
.+.|++||+|++++|+|.++|||++++||+|++.++ .|+|+|+++.+.+.+...|++.|+.+|+|.|+|.||.+||.++
T Consensus 2 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~~LP~~vd~~~ 80 (100)
T 3gla_A 2 QWVPRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKG-ILSIRGERKSESSTETERFSRIERRYGSFHRRFALPDSADADG 80 (100)
T ss_dssp CSCCCEEEEECSSEEEEEEECTTSCGGGCEEEEETT-EEEEEEEECCGGGSSGGGEEEECCCCEEEEEEEECCTTBCTTS
T ss_pred CccCcEEEEECCCEEEEEEECCCCCHHHEEEEEECC-EEEEEEEEcCcCccCCccEEEEeecceEEEEEEECCCCcChHH
Confidence 356999999999999999999999999999999998 8999999988766566678888999999999999999999999
Q ss_pred eEEEEeCCCEEEEEEeCCCC
Q 028228 161 TEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 161 i~A~~~nGgvL~I~lPK~~~ 180 (212)
|+|+|+|| +|+|++||.+.
T Consensus 81 i~A~~~~G-vL~I~~pK~~~ 99 (100)
T 3gla_A 81 ITAAGRNG-VLEIRIPKRPA 99 (100)
T ss_dssp CEEEEETT-EEEEEEEBC--
T ss_pred eEEEEeCC-EEEEEEecCCC
Confidence 99999999 99999999864
No 4
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=99.93 E-value=7.1e-26 Score=169.26 Aligned_cols=96 Identities=23% Similarity=0.334 Sum_probs=86.7
Q ss_pred CCCCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCC
Q 028228 81 TGQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRK 160 (212)
Q Consensus 81 ~~~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~ 160 (212)
.+.|++||+|++++|+|.++|||++++||+|+++++ .|+|+|+++.+ ..|+..|+.+|.|.|+|.||.+||.++
T Consensus 4 ~~~P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~-~L~I~g~~~~~-----~~~~~~er~~g~f~R~~~LP~~vd~~~ 77 (102)
T 4fei_A 4 PWTPAADWRDAGTHLDLLLDVPGVDAGTLALAEDGG-QLTVSGERPGT-----EHLLRSERPSGRFVRELAFPEPVRPAS 77 (102)
T ss_dssp ECCCCEEEEEETTEEEEEEECTTCCGGGCEEEEETT-EEEEEEEECCC-----SSCSSCCSEEEEEEEEEECSSCBCTTC
T ss_pred cccCcEEEEEcCCEEEEEEECCCCchHhEEEEEECC-EEEEEEEEecC-----CCEEEEEEeccEEEEEEECCCCcchhH
Confidence 467999999999999999999999999999999998 89999998542 356667778899999999999999999
Q ss_pred eEEEEeCCCEEEEEEeCCCCCce
Q 028228 161 TEAYLSNDVFLEIRIPKNPSTCD 183 (212)
Q Consensus 161 i~A~~~nGgvL~I~lPK~~~~r~ 183 (212)
|+|+|+|| +|+|++||.++...
T Consensus 78 i~A~~~~G-vL~I~lpK~~~~~d 99 (102)
T 4fei_A 78 GVASLAGG-VLTVRFEKLRPTID 99 (102)
T ss_dssp CEEEEETT-EEEEEEEBSSCCCC
T ss_pred cEEEEECC-EEEEEEEccCcccc
Confidence 99999999 99999999887544
No 5
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=99.93 E-value=1.5e-25 Score=182.99 Aligned_cols=99 Identities=17% Similarity=0.312 Sum_probs=72.6
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeE
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTE 162 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~ 162 (212)
...+||+|++++|+|.+|||||++|||+|++.+| .|+|+|+++.+.++ ..|+++ +|.|+|.||.+||.++|+
T Consensus 63 ~~~~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~--~~~~~r-----eF~R~~~LP~~Vd~~~i~ 134 (175)
T 2klr_A 63 TGLSEMRLEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQDE--HGFISR-----EFHRKYRIPADVDPLTIT 134 (175)
T ss_dssp ------CCCCSEEEEEECCSSCCGGGEEEEEETT-EEEEEEEEEEEEET--TEEEEE-----EEEEEEECTTTCCTTTCE
T ss_pred CCceEEEEcCCeEEEEEECCCCChHHEEEEEECC-EEEEEEEEcccccC--CceEEE-----EEEEEEECCCCcChhHeE
Confidence 3458999999999999999999999999999998 89999998765432 245443 499999999999999999
Q ss_pred EEE-eCCCEEEEEEeCCCC---CceeeccCCC
Q 028228 163 AYL-SNDVFLEIRIPKNPS---TCDISHGNGA 190 (212)
Q Consensus 163 A~~-~nGgvL~I~lPK~~~---~r~I~I~~~~ 190 (212)
|+| +|| ||+|++||++. .|+|+|+.+.
T Consensus 135 A~~s~dG-vL~I~lPK~~~~~~~r~I~I~~~~ 165 (175)
T 2klr_A 135 SSLSSDG-VLTVNGPRKQVSGPERTIPITREE 165 (175)
T ss_dssp EEECTTS-CEEEEEECC---------------
T ss_pred EEEcCCC-EEEEEEECCCCCCCCeEEEEecCC
Confidence 999 699 99999999875 4899998653
No 6
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=99.92 E-value=1.6e-25 Score=172.58 Aligned_cols=97 Identities=18% Similarity=0.189 Sum_probs=88.5
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeC-CeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCe
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVEN-GKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKT 161 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~-~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i 161 (212)
.|++||++++++|+|.++|||++++||+|++.+ + .|+|+|+++.+. +..|+..|+.+ +|.|+|.||.+||.++|
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~-~L~I~g~~~~~~---~~~~~~~Er~~-~f~R~~~LP~~vd~~~i 98 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQN-ELIIEAEREITE---PGVKYLTQRPK-YVRKVIRLPYNVAKDAE 98 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTT-EEEEEEECCCCC---CSCEEEECSCS-EEEEEEECSSEECTTCC
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCC-EEEEEEEEeccC---CCeEEEEEEeE-EEEEEEECCCCcCcchh
Confidence 489999999999999999999999999999999 8 899999987754 34677888888 99999999999999999
Q ss_pred -EEEEeCCCEEEEEEeCCCCCceeec
Q 028228 162 -EAYLSNDVFLEIRIPKNPSTCDISH 186 (212)
Q Consensus 162 -~A~~~nGgvL~I~lPK~~~~r~I~I 186 (212)
+|+|+|| +|+|++||.+..+ |+|
T Consensus 99 ~~A~~~~G-vL~I~lPK~~~~~-I~I 122 (123)
T 3aab_A 99 ISGKYENG-VLTIRIPIAGTSV-FKF 122 (123)
T ss_dssp CEEEEETT-EEEEEEEGGGEEC-SCC
T ss_pred CeeEEcCC-EEEEEEEcCCCCc-ccc
Confidence 9999999 9999999988765 666
No 7
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=99.92 E-value=3.7e-24 Score=161.21 Aligned_cols=96 Identities=24% Similarity=0.378 Sum_probs=83.0
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeE
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTE 162 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~ 162 (212)
.+..||+|++++|+|.++||||+++||+|++.++ .|+|+|+++...++ ..|+. ++|.|+|.||.+||.++|+
T Consensus 2 sg~~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~--~~~~~-----~eF~R~~~LP~~vd~~~i~ 73 (106)
T 3l1e_A 2 SGISEVRSDRDKFVIFLDVKHFSPEDLTVKVQED-FVEIHGKHNERQDD--HGYIS-----REFHRRYRLPSNVDQSALS 73 (106)
T ss_dssp CCSEEEEECSSEEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEETT--TEEEE-----EEEEEEEECCTTBCTTSCE
T ss_pred CCceEEEEcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCC--CCEEE-----EEEEEEEECCCCcChhHcE
Confidence 3568999999999999999999999999999998 89999998765432 24443 3599999999999999999
Q ss_pred EEE-eCCCEEEEEEeCCCC-------Cceeecc
Q 028228 163 AYL-SNDVFLEIRIPKNPS-------TCDISHG 187 (212)
Q Consensus 163 A~~-~nGgvL~I~lPK~~~-------~r~I~I~ 187 (212)
|+| +|| +|+|++||.+. +|+|+|+
T Consensus 74 A~~s~~G-vL~I~~PK~~~~~~~~~~~r~I~I~ 105 (106)
T 3l1e_A 74 CSLSADG-MLTFSGPKIPSGVDAGHSERAIPVS 105 (106)
T ss_dssp EEECTTS-EEEEEEEBCCCCTTTTSSSCCCCCC
T ss_pred EEECCCC-EEEEEEEccCcccccCCCCeEeeec
Confidence 999 799 99999999765 4778876
No 8
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=99.91 E-value=1.1e-23 Score=157.26 Aligned_cols=95 Identities=16% Similarity=0.226 Sum_probs=79.8
Q ss_pred CceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEE
Q 028228 84 SSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEA 163 (212)
Q Consensus 84 p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A 163 (212)
..+||+|++++|+|.++||||+++||+|++.++ .|+|+|+++.+.++ ..|++. +|.|+|.||.+||.++|+|
T Consensus 2 ~~vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~-~L~I~g~~~~~~~~--~~~~~~-----eF~R~~~LP~~vd~~~i~A 73 (101)
T 2wj5_A 2 AMAQVPTDPGYFSVLLDVKHFSPEEISVKVVGD-HVEVHARHEERPDE--HGFIAR-----EFHRRYRLPPGVDPAAVTS 73 (101)
T ss_dssp CCCCCCCCSSCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEECSST--TCCEEE-----EEEEEEECCTTBCTTCCEE
T ss_pred CcEEEEEeCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccCC--CCEEEE-----EEEEEEECCCCcChhHCEE
Confidence 357999999999999999999999999999998 89999999765432 245443 3999999999999999999
Q ss_pred EE-eCCCEEEEEEeCCCC--Cceeecc
Q 028228 164 YL-SNDVFLEIRIPKNPS--TCDISHG 187 (212)
Q Consensus 164 ~~-~nGgvL~I~lPK~~~--~r~I~I~ 187 (212)
+| +|| +|+|++||.+. ++.++|.
T Consensus 74 ~~s~nG-vL~I~lPK~~~~~~~~~~i~ 99 (101)
T 2wj5_A 74 ALSPEG-VLSIQATPASAQASLPSPPA 99 (101)
T ss_dssp EECTTS-EEEEEECBCCCCCSSCC---
T ss_pred EECCCC-EEEEEEECCCcCCCCCCccc
Confidence 99 799 99999999876 5566554
No 9
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=99.89 E-value=4.1e-23 Score=149.64 Aligned_cols=83 Identities=20% Similarity=0.385 Sum_probs=69.7
Q ss_pred EEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEe-
Q 028228 88 WLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLS- 166 (212)
Q Consensus 88 i~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~- 166 (212)
+.|++++|.|.++||||+++||+|++.++ .|+|+|+++.+.++. .| .+|+|.|+|.||.+||.++|+|+|+
T Consensus 2 ~~E~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~~~--~~-----~~~~F~R~~~LP~~vd~~~i~A~~~~ 73 (85)
T 3q9p_A 2 GSHTADRWRVSLDVNHFAPDELTVKTKDG-VVEITGKHAARQDEH--GY-----ISRCFTRKYTLPPGVDPTQVSSSLSP 73 (85)
T ss_dssp -CCCCCEEEEEEECTTTCCSEEEEEEETT-EEEEEEEEC---------C-----CCEEEEEEEECCTTCCGGGCEEEECT
T ss_pred ccCcCCEEEEEEECCCCChHHEEEEEECC-EEEEEEEEccccCCC--CE-----EEEEEEEEEECCCCcChHHcEEEECC
Confidence 46899999999999999999999999998 899999987654322 22 3478999999999999999999998
Q ss_pred CCCEEEEEEeCCC
Q 028228 167 NDVFLEIRIPKNP 179 (212)
Q Consensus 167 nGgvL~I~lPK~~ 179 (212)
|| ||+|++||.+
T Consensus 74 ~G-vL~I~lPK~k 85 (85)
T 3q9p_A 74 EG-TLTVEAPMPK 85 (85)
T ss_dssp TS-EEEEEEECCC
T ss_pred CC-EEEEEEEcCC
Confidence 99 9999999963
No 10
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.87 E-value=6.3e-22 Score=174.66 Aligned_cols=99 Identities=13% Similarity=0.146 Sum_probs=86.7
Q ss_pred CCCceeEEEcCc----eEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcc
Q 028228 82 GQSSVDWLQTDQ----AYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDAD 157 (212)
Q Consensus 82 ~~p~~di~e~~~----~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd 157 (212)
+.|++||+|+++ +|+|.++||||+|+||+|++++| .|+|+|+++.+.+++ +.+|+|.|+|.||.+||
T Consensus 97 ~~p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~-~L~I~ge~~~~~e~~--------r~~g~F~R~~~LP~~Vd 167 (314)
T 2bol_A 97 LDFLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKN-KLVVRAQKSVACGDA--------AMSESVGRSIPLPPSVD 167 (314)
T ss_dssp TGGGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETT-EEEEEECCBSSTTCC--------CBCCCEEEEEECCTTBC
T ss_pred CCCccceEEcCCCCceEEEEEEECCCCchHHeEEEEECC-EEEEEEEEeccCCCC--------EEEEEEEEEEECCCCcc
Confidence 568999999999 99999999999999999999998 899999987543321 56699999999999999
Q ss_pred cCCeEEEEe-CCCEEEEEEeCCCC-CceeeccCCC
Q 028228 158 WRKTEAYLS-NDVFLEIRIPKNPS-TCDISHGNGA 190 (212)
Q Consensus 158 ~~~i~A~~~-nGgvL~I~lPK~~~-~r~I~I~~~~ 190 (212)
.++|+|+|+ || ||+|++||.++ .+.|+|+...
T Consensus 168 ~e~i~A~~~~nG-VL~I~lPK~~~~~~~I~it~~~ 201 (314)
T 2bol_A 168 RNHIQATITTDD-VLVIEAPVNEPNYKAIKLSPEK 201 (314)
T ss_dssp GGGCEEEECSSS-EEEEEEEBSSCCTTTEEEETTT
T ss_pred ccccEEEEeCCC-EEEEEEeccCcccceeecccCC
Confidence 999999999 99 99999999876 5667776443
No 11
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=99.86 E-value=2.7e-21 Score=141.33 Aligned_cols=83 Identities=18% Similarity=0.397 Sum_probs=68.6
Q ss_pred EcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEE-eCC
Q 028228 90 QTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYL-SND 168 (212)
Q Consensus 90 e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~-~nG 168 (212)
+++++|+|.++||||+++||+|++.++ .|+|+|+++.+.+ +..|++. +|.|+|.||.+||.++|+|+| +||
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~-~L~I~g~~~~~~~--~~~~~~~-----ef~R~~~LP~~vd~~~i~A~~~~~G 74 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGD-VIEVHGKHEERQD--EHGFISR-----EFHRKYRIPADVDPLTITSSMSSDG 74 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETT-EEEEEEEEEEEEC--SSSEEEE-----EEEEEEECCTTBCGGGCEEEECTTS
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECC-EEEEEEEEecccC--CCCEEEE-----EEEEEEECCCCcChhHcEEEECCCC
Confidence 678999999999999999999999998 8999999876532 2345543 499999999999999999999 899
Q ss_pred CEEEEEEeCCCCC
Q 028228 169 VFLEIRIPKNPST 181 (212)
Q Consensus 169 gvL~I~lPK~~~~ 181 (212)
+|+|++||.+..
T Consensus 75 -vL~I~~pK~~~~ 86 (90)
T 2y1y_A 75 -VLTVNGPRKQVS 86 (90)
T ss_dssp -EEEEEECBC---
T ss_pred -EEEEEEEcCCCC
Confidence 999999998753
No 12
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=99.81 E-value=8.7e-20 Score=161.00 Aligned_cols=89 Identities=17% Similarity=0.249 Sum_probs=71.2
Q ss_pred CceeEEEcC---ceEEEEEec-CCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccC
Q 028228 84 SSVDWLQTD---QAYVLKAEL-PGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWR 159 (212)
Q Consensus 84 p~~di~e~~---~~y~v~~dl-PG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~ 159 (212)
..++|.+++ +.|.|.++| ||++|+||+|++++| .|+|+|+++.+.+ .+++.|+++|+|.|+|.||++||.+
T Consensus 221 ~~~~i~e~~~~~~~~~v~~~ldPG~~~edi~V~v~~~-~LtI~ge~~~~~~----~~~~~Er~~g~F~R~~~LP~~vd~~ 295 (314)
T 2bol_A 221 EGLEIVTAEDGSKKIHLELKVDPHFAPKDVKVWAKGN-KVYVHGVTGKEEK----TENASHSEHREFYKAFVTPEVVDAS 295 (314)
T ss_dssp CEEEEEECTTSCEEEEEEEECCTTCCGGGEEEEESSS-EEEEEEEEC----------------CEEEEEEEECSSEECGG
T ss_pred CCCcEEEecCCCcEEEEEEEcCCCCChHHeEEEEECC-EEEEEEEEeccCC----ceEEEEEeeeEEEEEEECCCCcChH
Confidence 447777755 689999999 999999999999998 8999999887543 4577789999999999999999999
Q ss_pred CeEEEEeCCCEEEEEEeCC
Q 028228 160 KTEAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 160 ~i~A~~~nGgvL~I~lPK~ 178 (212)
+|+|+|+|| ||+|++||.
T Consensus 296 ~i~A~~~dG-vL~i~~Pk~ 313 (314)
T 2bol_A 296 KTQAEIVDG-LMVVEAPLF 313 (314)
T ss_dssp GCEEEEETT-EEEEEEEEE
T ss_pred HeEEEEeCC-EEEEEEecC
Confidence 999999999 999999985
No 13
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.07 E-value=7.9e-10 Score=83.05 Aligned_cols=82 Identities=20% Similarity=0.241 Sum_probs=72.6
Q ss_pred CCCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCe
Q 028228 82 GQSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKT 161 (212)
Q Consensus 82 ~~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i 161 (212)
..+.++|+++++.+.|.+.+||++++++.|.+.++ .|.|++.... + ..|...+.|+..|+++..
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~-~l~v~~~~~~----~-----------~~y~~~~~L~~~I~~e~s 71 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEK-ELSALVKLPS----G-----------EDYNLKLELLHPIIPEQS 71 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSS-CEEEEEECTT----S-----------SEEEEEECBSSCCCGGGE
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcC-EEEEEEEeCC----C-----------cEEEEEeeCCCcCCcccc
Confidence 45789999999999999999999999999999988 7999986421 1 247788999999999999
Q ss_pred EEEEeCCCEEEEEEeCCCC
Q 028228 162 EAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 162 ~A~~~nGgvL~I~lPK~~~ 180 (212)
++++.+| .|.|+|+|.+.
T Consensus 72 ~~~~~~~-~l~i~L~K~~~ 89 (114)
T 1rl1_A 72 TFKVLST-KIEIKLKKPEA 89 (114)
T ss_dssp EEEECSS-SEEEEEECSSC
T ss_pred EEEEECC-EEEEEEEcCCC
Confidence 9999998 99999999876
No 14
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.04 E-value=1.1e-09 Score=78.96 Aligned_cols=81 Identities=14% Similarity=0.118 Sum_probs=71.2
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeE
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTE 162 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~ 162 (212)
.+.++++++++.+.|.+.+||+.++++.|.+.++ .|.|++.... + ..|...+.|+..|+++..+
T Consensus 2 ~~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~-~l~v~~~~~~----~-----------~~y~~~~~L~~~I~~~~s~ 65 (92)
T 2xcm_C 2 KYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQ-ILSVVIEVPG----E-----------DAYYLQPRLFGKIIPDKCK 65 (92)
T ss_dssp CSEEEEEEETTEEEEEEECCSCCGGGEEEEECSS-BEEEEECCTT----S-----------CCEEECCBBSSCBCGGGCE
T ss_pred CccccEEeCCCEEEEEEEECCCChHHeEEEEECC-EEEEEEEcCC----C-----------cEEEEeeEcCCccCchhEE
Confidence 4789999999999999999999999999999998 7999986421 1 2477788999999999999
Q ss_pred EEEeCCCEEEEEEeCCCC
Q 028228 163 AYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 163 A~~~nGgvL~I~lPK~~~ 180 (212)
+++.+| .|.|+|+|.++
T Consensus 66 ~~~~~~-~l~i~L~K~~~ 82 (92)
T 2xcm_C 66 YEVLST-KIEICLAKADI 82 (92)
T ss_dssp EEECSS-CEEEEEEBSSS
T ss_pred EEEECC-EEEEEEEcCCC
Confidence 999999 99999999865
No 15
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=98.02 E-value=8.2e-05 Score=56.03 Aligned_cols=80 Identities=11% Similarity=0.207 Sum_probs=66.7
Q ss_pred CCCCceeEEEcCceEEEEEecCCCC--cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCc-c
Q 028228 81 TGQSSVDWLQTDQAYVLKAELPGVG--KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDA-D 157 (212)
Q Consensus 81 ~~~p~~di~e~~~~y~v~~dlPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~v-d 157 (212)
+..|...|.++++...|.+.+|.++ ..++++.+++. .+....+ .|.-++.||..| +
T Consensus 15 ~iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~-~F~F~~~--------------------PYyLRL~lP~~vve 73 (115)
T 3eud_A 15 MITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHLS--------------------PYYLRLRFPHELID 73 (115)
T ss_dssp CBCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETT-EEEEEET--------------------TEEEEEECSSCEEC
T ss_pred EeCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCC-EEEEecC--------------------CeEEEEecCcceec
Confidence 3458889999999999999999977 88999999988 7777753 366679999987 7
Q ss_pred cCCeEEEEeCC-CEEEEEEeCCCCC
Q 028228 158 WRKTEAYLSND-VFLEIRIPKNPST 181 (212)
Q Consensus 158 ~~~i~A~~~nG-gvL~I~lPK~~~~ 181 (212)
.+.-+|+|.-. |.++|++||..+.
T Consensus 74 d~~~~A~YD~d~g~~~v~lpK~~~G 98 (115)
T 3eud_A 74 DERSTAQYDSKDECINVKVAKLNKN 98 (115)
T ss_dssp STTCEEEEETTTTEEEEEEEESSTT
T ss_pred CCCcceEEeCCCcEEEEEEcCCcCC
Confidence 78889999732 5999999998764
No 16
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=97.99 E-value=1.2e-05 Score=62.26 Aligned_cols=77 Identities=13% Similarity=0.253 Sum_probs=65.4
Q ss_pred CCceeEEEcCceEEEEEecCCCC--cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCc-ccC
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVG--KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDA-DWR 159 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~--~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~v-d~~ 159 (212)
.|...|.++++..+|.+.+|..+ ..+++|.+++. .+..... .|.-++.||..| |.+
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~-~F~F~~~--------------------PYyLRL~LP~~V~e~~ 61 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQEN-MIIFHLS--------------------PYYLRLRFPHELIDDE 61 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSS-SEEECSS--------------------SSCEEECCSSCEECCS
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCC-EEEEecC--------------------CeEEEecCCCeeecCC
Confidence 47788999999999999999999 89999999987 7776653 255569999998 889
Q ss_pred CeEEEEeC-CCEEEEEEeCCCC
Q 028228 160 KTEAYLSN-DVFLEIRIPKNPS 180 (212)
Q Consensus 160 ~i~A~~~n-GgvL~I~lPK~~~ 180 (212)
..+|+|.- -|.|+|+|||...
T Consensus 62 ~~kA~YD~d~~~~~VtLpK~~~ 83 (134)
T 2k8q_A 62 RSTAQYDSKDECINVKVAKLNK 83 (134)
T ss_dssp SCEEEEETTTTEEEEEEEESST
T ss_pred CcceeEeccCCEEEEEEeCCCC
Confidence 99999973 2599999999765
No 17
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.85 E-value=0.00024 Score=54.05 Aligned_cols=81 Identities=17% Similarity=0.175 Sum_probs=67.4
Q ss_pred CCceeEEEcCceEEEEEecCCC---CcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEE-CCCCccc
Q 028228 83 QSSVDWLQTDQAYVLKAELPGV---GKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLE-LPEDADW 158 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~---~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~-LP~~vd~ 158 (212)
.+.++|+++.+...|.+.++|+ .++++.|.+..+ .|.|+..... .. .|.-.+. |-..|++
T Consensus 20 ~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~-~l~v~~~~~~---~~------------~y~~~~~~L~~~I~~ 83 (127)
T 1x5m_A 20 ISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTER-SFDLLVKNLN---GK------------SYSMIVNNLLKPISV 83 (127)
T ss_dssp CCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSS-EEEEEECSCS---SS------------CEEEEEECBSSCCCT
T ss_pred ccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcC-EEEEEEEcCC---CC------------cEEEEhHHhcCccCc
Confidence 4579999999999999999999 899999999988 7999874211 11 2555674 8899999
Q ss_pred CCeEEEEeCCCEEEEEEeCCCC
Q 028228 159 RKTEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 159 ~~i~A~~~nGgvL~I~lPK~~~ 180 (212)
++-+.....+ .|.|+|-|.+.
T Consensus 84 e~S~~~v~~~-kVei~L~K~~~ 104 (127)
T 1x5m_A 84 EGSSKKVKTD-TVLILCRKKVE 104 (127)
T ss_dssp TTCEEEEETT-EEEEEEECSSS
T ss_pred ccCEEEEeCC-EEEEEEEECCC
Confidence 9988899888 99999999874
No 18
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=97.84 E-value=0.00012 Score=56.62 Aligned_cols=89 Identities=10% Similarity=0.073 Sum_probs=70.4
Q ss_pred CCCceeEEEc-CceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeeccc-----CCCCCceEEeEEEeeeEEEEEECCCC
Q 028228 82 GQSSVDWLQT-DQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQR-----DPRAKDWRSGHWWEHGFVRRLELPED 155 (212)
Q Consensus 82 ~~p~~di~e~-~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~-----~~~~~~~~~~e~~~g~F~R~~~LP~~ 155 (212)
..+.++|+++ .+...|.+.++++.++++.|.+..+ .|.|+....... ...+.. -.|.-.+.|-..
T Consensus 18 ~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~-~l~v~~~~~~~~~l~~~~a~g~~--------~~y~~~~~L~~~ 88 (134)
T 1wh0_A 18 AFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQ-DFTLIFQTRDGNFLRLHPGCGPH--------TTFRWQVKLRNL 88 (134)
T ss_dssp SCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSS-EEEEEECBCCHHHHHHSTTCCTT--------SCEEEEEEBSSC
T ss_pred cCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECC-EEEEEEEcCCCcccccccccCcc--------eeEEEecccccc
Confidence 4688999999 9999999999999999999999988 799987532211 000000 036666889999
Q ss_pred cccCCeEEEEeCCCEEEEEEeCCCC
Q 028228 156 ADWRKTEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 156 vd~~~i~A~~~nGgvL~I~lPK~~~ 180 (212)
|++++-+.+...+ .|.|+|.|++.
T Consensus 89 I~pe~S~~~v~~~-kIeI~L~K~e~ 112 (134)
T 1wh0_A 89 IEPEQCTFCFTAS-RIDICLRKRQS 112 (134)
T ss_dssp EEEEEEEEEECSS-EEEEEEEESSS
T ss_pred CCchhCEEEEeCC-EEEEEEEECCC
Confidence 9999988888888 99999999865
No 19
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=97.74 E-value=0.00072 Score=51.18 Aligned_cols=83 Identities=12% Similarity=0.136 Sum_probs=67.1
Q ss_pred CCCceeEEEcCceEEEEEecC-CC-CcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccC
Q 028228 82 GQSSVDWLQTDQAYVLKAELP-GV-GKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWR 159 (212)
Q Consensus 82 ~~p~~di~e~~~~y~v~~dlP-G~-~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~ 159 (212)
..|.+.++++.++..|++.|| |+ +++||.|.+..+ .|.|..+... . ..+.-...|...|+++
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~~~~----~-----------~~~~~~~~L~~~I~~e 81 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAMLEEN----G-----------ERVLMEGKLTHKINTE 81 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEECSS----S-----------EEEEEEEEBSSCBCTT
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEEccC----C-----------CceEEcccccCcCCCc
Confidence 457899999999999999999 88 899999999988 7999875310 1 0122346788999999
Q ss_pred CeEEEEeCCCEEEEEEeCCCC
Q 028228 160 KTEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 160 ~i~A~~~nGgvL~I~lPK~~~ 180 (212)
.-+..++++..|.|+|-|.+.
T Consensus 82 ~S~w~i~~~k~v~i~L~K~~~ 102 (124)
T 1wgv_A 82 SSLWSLEPGKCVLVNLSKVGE 102 (124)
T ss_dssp TCEEEECTTSEEEEEECBSSS
T ss_pred CCEEEEeCCCEEEEEEEECCC
Confidence 999999988349999999864
No 20
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=97.64 E-value=0.00045 Score=52.88 Aligned_cols=77 Identities=12% Similarity=0.172 Sum_probs=61.9
Q ss_pred CCceeEEEcCceEEEEEecC-CCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCe
Q 028228 83 QSSVDWLQTDQAYVLKAELP-GVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKT 161 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i 161 (212)
.|.+.++++.+...|.+.|| |+++++|.|.+..+ .|.|..+ +. . .-...|...|+++.-
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~------g~--~-----------~~~~~L~~~I~~e~S 63 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGK-KICVKNQ------GE--I-----------VIDGELLHEVDVSSL 63 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETT-EEEEEET------TE--E-----------EEEEEBSSCEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECC-EEEEEEC------CE--e-----------eEccccccccccccC
Confidence 37799999999999999996 89999999999998 7999863 00 0 122578889999999
Q ss_pred EEEEeCCCEEEEEEeCCCC
Q 028228 162 EAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 162 ~A~~~nGgvL~I~lPK~~~ 180 (212)
+..+.++ .|.|+|-|...
T Consensus 64 ~w~i~~~-kv~i~L~K~~~ 81 (131)
T 2o30_A 64 WWVINGD-VVDVNVTKKRN 81 (131)
T ss_dssp EEEEETT-EEEEEEEESSC
T ss_pred EEEEeCC-EEEEEEEECCC
Confidence 9999999 89999999743
No 21
>3igf_A ALL4481 protein; two-domained protein consisting of the N-terminal alpha-beta the C-terminal all beta domain., structural genomics; 2.00A {Nostoc SP}
Probab=97.63 E-value=0.0002 Score=64.14 Aligned_cols=72 Identities=22% Similarity=0.250 Sum_probs=59.1
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccC-Ce
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWR-KT 161 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~-~i 161 (212)
.+++.|... .|.+++.|||++|++|++.-.++ .|+|+. |.|.|.+.||...--- -.
T Consensus 297 ~~~~~i~~~--~~~~~l~lP~~~~~~~~l~~~gd-eL~v~~--------------------g~~rR~i~LP~~L~~~~v~ 353 (374)
T 3igf_A 297 PKPITIDTH--NRQVRLFLPGFDKKQVKLTQYGP-EVTVEA--------------------GDQRRNIFLPPALSGRPIT 353 (374)
T ss_dssp CCSEEEETT--TTEEEEECTTCCGGGCEEEEETT-EEEEEE--------------------TTEEEEEECCTTTTTCCEE
T ss_pred CCCEEEEec--cEEEEEECCCCCHHHeEEEEECC-eEEEEE--------------------CCEeecccCCHHHcCCCcc
Confidence 355666444 89999999999999999999988 899986 4699999999875544 34
Q ss_pred EEEEeCCCEEEEEEeCC
Q 028228 162 EAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 162 ~A~~~nGgvL~I~lPK~ 178 (212)
.|+|+|| .|+|++-..
T Consensus 354 ~A~~~~~-~L~i~~~~~ 369 (374)
T 3igf_A 354 GAKFQNN-YLIISFLEH 369 (374)
T ss_dssp EEEEETT-EEEEEECCC
T ss_pred ccEEECC-EEEEEEehh
Confidence 5999999 999998543
No 22
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=97.56 E-value=0.00053 Score=52.03 Aligned_cols=78 Identities=13% Similarity=0.133 Sum_probs=65.1
Q ss_pred ceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEE
Q 028228 85 SVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAY 164 (212)
Q Consensus 85 ~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~ 164 (212)
.++++++.+...|++.+|+. +++.|.+..+ .|.+++..... + ..|.-.+.|-..|+++..+.+
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~-~l~~~~~~~~~---~-----------~~y~~~l~L~~~I~~e~S~~~ 67 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKS-KLTFSCLGGSD---N-----------FKHLNEIDLFHCIDPNDSKHK 67 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETT-EEEEEEEETTT---T-----------EEEEEEEEBSSCEEEEEEEEE
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECC-EEEEEEEeCCC---C-----------ceEEEEEEccceeccccCEEE
Confidence 79999999999999999995 7999999988 89999863111 1 136666889999999998888
Q ss_pred EeCCCEEEEEEeCCCC
Q 028228 165 LSNDVFLEIRIPKNPS 180 (212)
Q Consensus 165 ~~nGgvL~I~lPK~~~ 180 (212)
..++ .|.|+|.|+++
T Consensus 68 v~~~-kiei~L~K~~~ 82 (125)
T 1ejf_A 68 RTDR-SILCCLRKGES 82 (125)
T ss_dssp ECSS-CEEEEEEESST
T ss_pred ECCC-EEEEEEEECCC
Confidence 8887 99999999864
No 23
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=97.49 E-value=0.0011 Score=52.36 Aligned_cols=79 Identities=16% Similarity=0.248 Sum_probs=65.4
Q ss_pred CCCceeEEEcCceEEEEEecC-CCCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCC
Q 028228 82 GQSSVDWLQTDQAYVLKAELP-GVGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRK 160 (212)
Q Consensus 82 ~~p~~di~e~~~~y~v~~dlP-G~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~ 160 (212)
..|.+.|+++.++..|++.|| |+++++|.|.+..+ .|.|..+. . . + -...|...|+++.
T Consensus 12 ~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~-~L~v~~kg------~--~----------~-l~g~L~~~I~~ee 71 (157)
T 2rh0_A 12 GTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSR-HVALAVGG------R--E----------I-LKGKLFDSTIADE 71 (157)
T ss_dssp ECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSS-EEEEEETT------E--E----------E-EEEEBSSCBCGGG
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccceEEEEecC-EEEEEECC------E--E----------E-EeeccccccCccc
Confidence 357899999999999999998 89999999999988 79988630 0 1 1 2357889999999
Q ss_pred eEEEEeCCCEEEEEEeCCCC
Q 028228 161 TEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 161 i~A~~~nGgvL~I~lPK~~~ 180 (212)
-+..++++.+|.|+|-|.+.
T Consensus 72 S~w~i~~~k~v~I~L~K~~~ 91 (157)
T 2rh0_A 72 GTWTLEDRKMVRIVLTKTKR 91 (157)
T ss_dssp CEEEEECCCEEEEEEEBSSC
T ss_pred cEEEEcCCcEEEEEEEEcCC
Confidence 99999988349999999864
No 24
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=97.46 E-value=0.0012 Score=50.32 Aligned_cols=80 Identities=11% Similarity=0.137 Sum_probs=64.4
Q ss_pred CCCceeEEEcCceEEEEEecC-C--CCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCccc
Q 028228 82 GQSSVDWLQTDQAYVLKAELP-G--VGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADW 158 (212)
Q Consensus 82 ~~p~~di~e~~~~y~v~~dlP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~ 158 (212)
..|.+.++++.++..|.+.|| | +++++|.|.+..+ .|.|..+.. . .+ + ...|...|++
T Consensus 6 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~-~l~v~~kg~-----~--~~---------~--~~~L~~~I~~ 66 (131)
T 1wfi_A 6 SGPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRR-HLRVGLKGQ-----P--PV---------V--DGELYNEVKV 66 (131)
T ss_dssp SCCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETT-EEEEEETTS-----C--CS---------B--CSCBSSCBCS
T ss_pred CCCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCC-EEEEEECCc-----e--EE---------E--eccccccccc
Confidence 457899999999999999999 6 8999999999988 799986311 0 11 1 1357788999
Q ss_pred CCeEEEEeCCCEEEEEEeCCCC
Q 028228 159 RKTEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 159 ~~i~A~~~nGgvL~I~lPK~~~ 180 (212)
+.-...+++|..|.|+|-|..+
T Consensus 67 e~s~w~i~~~k~v~i~L~K~~~ 88 (131)
T 1wfi_A 67 EESSWLIEDGKVVTVHLEKINK 88 (131)
T ss_dssp TTCEEEEETTTEEEEEEEBSSS
T ss_pred ccCEEEEcCCCEEEEEEEECCC
Confidence 9989999886479999999864
No 25
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=97.40 E-value=0.0014 Score=49.48 Aligned_cols=81 Identities=10% Similarity=0.139 Sum_probs=65.1
Q ss_pred CCCCceeEEEcCceEEEEEecC-C--CCcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcc
Q 028228 81 TGQSSVDWLQTDQAYVLKAELP-G--VGKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDAD 157 (212)
Q Consensus 81 ~~~p~~di~e~~~~y~v~~dlP-G--~~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd 157 (212)
...|.+.+.++.++..|++.|| | ++++||.|.+..+ .|.|..+-. . .+ | ...|...|+
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~-~l~v~~kg~-----~--~~---------~--~g~L~~~I~ 74 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRR-HLRVGLKGQ-----P--AI---------I--DGELYNEVK 74 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETT-EEEEEETTS-----C--CS---------E--EEEBSSCBC
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcC-EEEEEEcCc-----c--eE---------E--ecccccccc
Confidence 3467899999999999999999 4 7999999999998 788865310 0 11 2 246888999
Q ss_pred cCCeEEEEeCCCEEEEEEeCCCC
Q 028228 158 WRKTEAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 158 ~~~i~A~~~nGgvL~I~lPK~~~ 180 (212)
++.-...+++|..|.|+|-|.+.
T Consensus 75 ~deS~w~i~~~~~i~i~L~K~~~ 97 (121)
T 3qor_A 75 VEESSWLIADGAVVTVHLEKINK 97 (121)
T ss_dssp GGGCEEEEETTTEEEEEEEBSSS
T ss_pred ccccEEEEcCCCEEEEEEEECCC
Confidence 99999999986589999999764
No 26
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=97.27 E-value=0.00091 Score=52.55 Aligned_cols=78 Identities=21% Similarity=0.247 Sum_probs=63.8
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEe-CCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCe
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVE-NGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKT 161 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~-~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i 161 (212)
.|.++++++.+...|++.|+++ +++.|.+. .+ .|.+++. .. . + ..|.-.+.|-..|+++ -
T Consensus 4 ~P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~-~l~~~~~-~~--~-~-----------~~y~~~l~L~~~Idpe-S 64 (150)
T 2kmw_A 4 NPEVLWAQRSDKVYLTVALPDA--KDISVKCEPQG-LFSFSAL-GA--Q-G-----------ERFEFSLELYGKIMTE-Y 64 (150)
T ss_dssp CCCEEEEECSSEEEEEECCSSE--EEEEECCCTTE-EEEEEEE-TT--T-T-----------EEEEEEEEBSSCEEEE-E
T ss_pred CCcEEEEeCCCEEEEEEEeCCC--CceEEEEecCC-EEEEEEE-cC--C-C-----------ceEEEEeEhhhccccc-c
Confidence 3889999999999999999997 58999998 66 8999986 11 1 1 1366678898999999 8
Q ss_pred EEEEeCCCEEEEEEeCCCC
Q 028228 162 EAYLSNDVFLEIRIPKNPS 180 (212)
Q Consensus 162 ~A~~~nGgvL~I~lPK~~~ 180 (212)
+.+.... .+.|+|.|++.
T Consensus 65 ~~~v~~~-kIei~L~K~e~ 82 (150)
T 2kmw_A 65 RKNVGLR-NIIFSIQKEER 82 (150)
T ss_dssp EEEEESS-SEEEEEEECCS
T ss_pred eEEecCC-EEEEEEEECCC
Confidence 8888777 89999999775
No 27
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=97.05 E-value=0.00037 Score=53.71 Aligned_cols=83 Identities=14% Similarity=0.255 Sum_probs=59.8
Q ss_pred CCceeEEEcCce-------EEEEEecCCCCcCcEEEEEeCCeEEEEEEEeecccC-CCCCceEEeEEEeeeEEEEEECCC
Q 028228 83 QSSVDWLQTDQA-------YVLKAELPGVGKNQVQVSVENGKIVEISGQWKEQRD-PRAKDWRSGHWWEHGFVRRLELPE 154 (212)
Q Consensus 83 ~p~~di~e~~~~-------y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~~~~~-~~~~~~~~~e~~~g~F~R~~~LP~ 154 (212)
.|.++++++.+. ..|++.+|+++ ++.|.+..+ .|.+++....... ..+ ..|.-.+.|..
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~~--~~~V~~~~~-~l~~~~~~~~~~g~~~~----------~~y~~~l~L~~ 72 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADCD--APELTIKPS-YIELKAQSKPHVGDENV----------HHYQLHIDLYK 72 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSEE--SCCCCBCSS-EEEECCEEC-------C----------EEBCEEEECSS
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCCC--ceEEEEECC-EEEEEEecccccCCccC----------ceEEEEEEChh
Confidence 477888999877 99999999974 888999988 8999876432000 000 13556689999
Q ss_pred CcccCCeEEEEeCCCE-EEEEEeCCC
Q 028228 155 DADWRKTEAYLSNDVF-LEIRIPKNP 179 (212)
Q Consensus 155 ~vd~~~i~A~~~nGgv-L~I~lPK~~ 179 (212)
.|+++..+.++.++ . |.|+|.|++
T Consensus 73 ~Idpe~S~~~v~~~-~~vei~L~K~~ 97 (134)
T 2cg9_X 73 EIIPEKTMHKVANG-QHYFLKLYKKD 97 (134)
T ss_dssp CCCSSSEEEEECCC---CEEEEEECS
T ss_pred hccccccEEEECCC-EEEEEEEEECC
Confidence 99999999999888 7 999999987
No 28
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=79.51 E-value=6.8 Score=27.69 Aligned_cols=35 Identities=14% Similarity=0.195 Sum_probs=28.8
Q ss_pred eEEEEEecC-CCCcCcEEEEEeCCeEEEEEEEeeccc
Q 028228 94 AYVLKAELP-GVGKNQVQVSVENGKIVEISGQWKEQR 129 (212)
Q Consensus 94 ~y~v~~dlP-G~~~edI~V~v~~~~~L~I~g~~~~~~ 129 (212)
.|.-.+.|| +++.+.|+-++.|| +|+|+-.+....
T Consensus 62 ~f~R~~~LP~~vd~~~i~A~~~~G-vL~I~lpK~~~~ 97 (102)
T 4fei_A 62 RFVRELAFPEPVRPASGVASLAGG-VLTVRFEKLRPT 97 (102)
T ss_dssp EEEEEEECSSCBCTTCCEEEEETT-EEEEEEEBSSCC
T ss_pred EEEEEEECCCCcchhHcEEEEECC-EEEEEEEccCcc
Confidence 355577899 68999999999999 999999876643
No 29
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=74.05 E-value=6.2 Score=27.06 Aligned_cols=34 Identities=9% Similarity=0.028 Sum_probs=29.1
Q ss_pred eeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeCCC
Q 028228 144 HGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKNP 179 (212)
Q Consensus 144 g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK~~ 179 (212)
..|.-.+.|| +++.+.|+..+.+| +|+|..-+..
T Consensus 7 ~~~~v~~dlP-G~~~edi~V~v~~~-~L~I~g~~~~ 40 (85)
T 3q9p_A 7 DRWRVSLDVN-HFAPDELTVKTKDG-VVEITGKHAA 40 (85)
T ss_dssp CEEEEEEECT-TTCCSEEEEEEETT-EEEEEEEEC-
T ss_pred CEEEEEEECC-CCChHHEEEEEECC-EEEEEEEEcc
Confidence 3577889998 79999999999999 9999987754
No 30
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=71.57 E-value=7.2 Score=27.21 Aligned_cols=34 Identities=18% Similarity=0.317 Sum_probs=28.5
Q ss_pred ceEEEEEecCC-CCcCcEEEEEeCCeEEEEEEEeec
Q 028228 93 QAYVLKAELPG-VGKNQVQVSVENGKIVEISGQWKE 127 (212)
Q Consensus 93 ~~y~v~~dlPG-~~~edI~V~v~~~~~L~I~g~~~~ 127 (212)
+.|.-.+.||. ++.+.|+-++.|| +|+|+-.+.+
T Consensus 64 g~f~r~~~LP~~vd~~~i~A~~~~G-vL~I~~pK~~ 98 (100)
T 3gla_A 64 GSFHRRFALPDSADADGITAAGRNG-VLEIRIPKRP 98 (100)
T ss_dssp EEEEEEEECCTTBCTTSCEEEEETT-EEEEEEEBC-
T ss_pred eEEEEEEECCCCcChHHeEEEEeCC-EEEEEEecCC
Confidence 36777899994 8999999999999 9999987653
No 31
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=67.07 E-value=8.4 Score=27.54 Aligned_cols=35 Identities=20% Similarity=0.394 Sum_probs=30.4
Q ss_pred eEEEEEecC-CCCcCcEEEEE-eCCeEEEEEEEeeccc
Q 028228 94 AYVLKAELP-GVGKNQVQVSV-ENGKIVEISGQWKEQR 129 (212)
Q Consensus 94 ~y~v~~dlP-G~~~edI~V~v-~~~~~L~I~g~~~~~~ 129 (212)
+|.=.+.|| +++.+.|+-++ .|| +|+|+..+....
T Consensus 56 eF~R~~~LP~~vd~~~i~A~~s~~G-vL~I~~PK~~~~ 92 (106)
T 3l1e_A 56 EFHRRYRLPSNVDQSALSCSLSADG-MLTFSGPKIPSG 92 (106)
T ss_dssp EEEEEEECCTTBCTTSCEEEECTTS-EEEEEEEBCCCC
T ss_pred EEEEEEECCCCcChhHcEEEECCCC-EEEEEEEccCcc
Confidence 378889999 79999999999 788 999999887653
No 32
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=66.79 E-value=11 Score=28.88 Aligned_cols=34 Identities=21% Similarity=0.280 Sum_probs=28.3
Q ss_pred eEEEEEecC-CCCcCcEEEEEeCCeEEEEEEEeecc
Q 028228 94 AYVLKAELP-GVGKNQVQVSVENGKIVEISGQWKEQ 128 (212)
Q Consensus 94 ~y~v~~dlP-G~~~edI~V~v~~~~~L~I~g~~~~~ 128 (212)
.|.-.+.|| +++.+.|+-++.|| +|+|+-.+.+.
T Consensus 118 ~f~R~~~LP~~vd~~~i~A~~~nG-vL~I~lpK~~~ 152 (161)
T 4eld_A 118 EIYRTIKLPATVKEENASAKFENG-VLSVILPKAES 152 (161)
T ss_dssp EEEEEEECSSCBCGGGCEEEEETT-EEEEEEEBCGG
T ss_pred cEEEEEECCCCcccccEEEEEECC-EEEEEEEcCCC
Confidence 455567898 68999999999999 99999987654
No 33
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=65.01 E-value=10 Score=26.85 Aligned_cols=33 Identities=21% Similarity=0.396 Sum_probs=28.9
Q ss_pred EEEEEecC-CCCcCcEEEEE-eCCeEEEEEEEeecc
Q 028228 95 YVLKAELP-GVGKNQVQVSV-ENGKIVEISGQWKEQ 128 (212)
Q Consensus 95 y~v~~dlP-G~~~edI~V~v-~~~~~L~I~g~~~~~ 128 (212)
|.-.+.|| +++.+.|+-++ .|| +|+|+..+...
T Consensus 56 F~R~~~LP~~vd~~~i~A~~s~nG-vL~I~lPK~~~ 90 (101)
T 2wj5_A 56 FHRRYRLPPGVDPAAVTSALSPEG-VLSIQATPASA 90 (101)
T ss_dssp EEEEEECCTTBCTTCCEEEECTTS-EEEEEECBCCC
T ss_pred EEEEEECCCCcChhHCEEEECCCC-EEEEEEECCCc
Confidence 77889999 78999999999 688 99999987654
No 34
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=64.59 E-value=11 Score=25.88 Aligned_cols=33 Identities=12% Similarity=0.165 Sum_probs=28.6
Q ss_pred eeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeCC
Q 028228 144 HGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 144 g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK~ 178 (212)
..|.-.+.|| +++.+.|+-.+.+| .|+|..-+.
T Consensus 6 ~~~~v~~dlP-G~~~edi~V~v~~~-~L~I~g~~~ 38 (90)
T 2y1y_A 6 DRFSVNLDVK-HFSPEELKVKVLGD-VIEVHGKHE 38 (90)
T ss_dssp CCEEEEEECT-TSCGGGEEEEEETT-EEEEEEEEE
T ss_pred CEEEEEEECC-CCcHHHeEEEEECC-EEEEEEEEe
Confidence 3577789999 89999999999998 999998754
No 35
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=59.14 E-value=20 Score=26.06 Aligned_cols=34 Identities=21% Similarity=0.140 Sum_probs=28.3
Q ss_pred eEEEEEECCCCcccCCeEEEEeC-CCEEEEEEeCCCC
Q 028228 145 GFVRRLELPEDADWRKTEAYLSN-DVFLEIRIPKNPS 180 (212)
Q Consensus 145 ~F~R~~~LP~~vd~~~i~A~~~n-GgvL~I~lPK~~~ 180 (212)
.|.-.+.|| +++.+.|+..+.+ | .|+|+.-+...
T Consensus 35 ~~~v~~~lP-G~~~edi~V~v~~~~-~L~I~g~~~~~ 69 (123)
T 3aab_A 35 YLVVVADLA-GFNKEKIKARVSGQN-ELIIEAEREIT 69 (123)
T ss_dssp EEEEEEECC-SCCGGGCEEEEETTT-EEEEEEECCCC
T ss_pred EEEEEEECC-CCCHHHEEEEEeCCC-EEEEEEEEecc
Confidence 356668888 7899999999999 7 99999987654
No 36
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=58.85 E-value=21 Score=27.11 Aligned_cols=34 Identities=21% Similarity=0.332 Sum_probs=28.9
Q ss_pred eEEEEEecC-CCCcCcEEEEEeCCeEEEEEEEeecc
Q 028228 94 AYVLKAELP-GVGKNQVQVSVENGKIVEISGQWKEQ 128 (212)
Q Consensus 94 ~y~v~~dlP-G~~~edI~V~v~~~~~L~I~g~~~~~ 128 (212)
.|.-.+.|| +++.+.|+-++.|| +|+|+-.+...
T Consensus 105 ~F~R~~~LP~~vd~~~i~A~~~nG-vL~I~lPK~~~ 139 (151)
T 1gme_A 105 KFVRRFRLLEDAKVEEVKAGLENG-VLTVTVPKAEV 139 (151)
T ss_dssp CEEEEEECSSCCCGGGCEEEEETT-EEEEEEECCCC
T ss_pred EEEEEEECCCCccccceEEEEECC-EEEEEEEccCc
Confidence 466678898 78999999999999 99999987654
No 37
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=52.75 E-value=15 Score=28.91 Aligned_cols=32 Identities=22% Similarity=0.483 Sum_probs=26.6
Q ss_pred EEEEEecC-CCCcCcEEEEE-eCCeEEEEEEEeec
Q 028228 95 YVLKAELP-GVGKNQVQVSV-ENGKIVEISGQWKE 127 (212)
Q Consensus 95 y~v~~dlP-G~~~edI~V~v-~~~~~L~I~g~~~~ 127 (212)
|.=.+.|| +++.+.|+-++ .|| +|+|+..+..
T Consensus 118 F~R~~~LP~~Vd~~~i~A~~s~dG-vL~I~lPK~~ 151 (175)
T 2klr_A 118 FHRKYRIPADVDPLTITSSLSSDG-VLTVNGPRKQ 151 (175)
T ss_dssp EEEEEECTTTCCTTTCEEEECTTS-CEEEEEECC-
T ss_pred EEEEEECCCCcChhHeEEEEcCCC-EEEEEEECCC
Confidence 55667898 79999999999 688 9999998754
No 38
>2cql_A OK/SW-CL.103, 60S ribosomal protein L9; N-terminal domain, alpha and beta (A+B), structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: d.141.1.1
Probab=47.66 E-value=33 Score=24.45 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=15.6
Q ss_pred cCcEEEEEeCCeEEEEEEEe
Q 028228 106 KNQVQVSVENGKIVEISGQW 125 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~ 125 (212)
|+.|+|+++++ .|+|+|.+
T Consensus 20 P~gV~V~i~~~-~VtVKGPk 38 (100)
T 2cql_A 20 PENVDITLKGR-TVIVKGPR 38 (100)
T ss_dssp CSSCEEEEETT-EEEEEETT
T ss_pred CCCCEEEEeCC-EEEEECCC
Confidence 47788999987 89999963
No 39
>1rl6_A Protein (ribosomal protein L6); RNA-binding protein, gentamicin resistance, alpha/beta protein; 2.00A {Geobacillus stearothermophilus} SCOP: d.141.1.1 d.141.1.1 PDB: 1giy_H 1ml5_h* 1c04_B 1yl3_H 2b66_H 2b9n_H 2b9p_H 1eg0_J 487d_J
Probab=39.65 E-value=59 Score=25.58 Aligned_cols=46 Identities=17% Similarity=0.321 Sum_probs=31.2
Q ss_pred cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeCC
Q 028228 106 KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK~ 178 (212)
|+.|+|+++++ .++|+|.+ |...+.| +.. |+...+++ .|.|+.+..
T Consensus 11 P~gV~V~i~~~-~VtVkGpk------------------G~L~~~~--~~~-----v~i~~~~~-~l~v~~~~~ 56 (177)
T 1rl6_A 11 PAGVTVTVNGN-TVTVKGPK------------------GELTRTF--HPD-----MTITVEGN-VITVTRPSD 56 (177)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEEC--CTT-----CEEEEETT-EEEEECSCC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEEc--CCC-----EEEEEeCC-EEEEEcCCC
Confidence 57789999987 89999963 3444434 433 44556788 888776543
No 40
>1nkw_E 50S ribosomal protein L6; ribosome, large subunit, X- RAY structure, peptidyl-transferase, peptide bond formation; 3.10A {Deinococcus radiodurans} SCOP: i.1.1.2 PDB: 1sm1_E*
Probab=38.38 E-value=69 Score=26.06 Aligned_cols=46 Identities=15% Similarity=0.271 Sum_probs=30.7
Q ss_pred cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeCC
Q 028228 106 KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK~ 178 (212)
|+.|+|+++++ .|+|+|.+ |...+.| +.. |....++| .|.|+.+..
T Consensus 39 P~gV~V~i~~~-~VtVKGPk------------------G~L~~~~--~~~-----v~i~~e~~-~i~v~~~~~ 84 (212)
T 1nkw_E 39 PSGVTVNAQDG-VFKVKGPK------------------GELTVPY--NTE-----LTVRQDGD-QLLVERPSD 84 (212)
T ss_pred CCCcEEEEeCC-EEEEECCC------------------EEEEEEC--CCC-----eEEEEECC-EEEEEcCCC
Confidence 57788999987 89999964 3344433 433 44556788 888876543
No 41
>3oeq_A Frataxin homolog, mitochondrial; alpha/beta sandwich, metallochaperone, iron-storage, transpo protein; 2.96A {Saccharomyces cerevisiae} SCOP: d.82.2.1 PDB: 2fql_A 3oer_A 2ga5_A
Probab=35.34 E-value=54 Score=24.40 Aligned_cols=28 Identities=14% Similarity=0.217 Sum_probs=19.5
Q ss_pred eEEEEeCCCEEEEEEeCCCCCceeeccCCCCC
Q 028228 161 TEAYLSNDVFLEIRIPKNPSTCDISHGNGAAT 192 (212)
Q Consensus 161 i~A~~~nGgvL~I~lPK~~~~r~I~I~~~~~~ 192 (212)
+.+.+.+| ||+|+++. .-+|-|+.-.+.
T Consensus 49 ~Dve~~~g-VLti~f~~---~~~~VINkQ~P~ 76 (123)
T 3oeq_A 49 PDVELSHG-VMTLEIPA---FGTYVINKQPPN 76 (123)
T ss_dssp CEEEECSS-EEEEECTT---TCCEEEECCCSS
T ss_pred eEEEccCC-EEEEEECC---CCEEEEeCCChh
Confidence 78889888 99999974 335556544333
No 42
>1vq8_E 50S ribosomal protein L6P; ribosome 50S, protein-protein complex, RNA-RNA complex, PROT complex, peptidyl transferase reaction; HET: 1MA OMU OMG UR3 PSU SPS; 2.20A {Haloarcula marismortui} SCOP: d.141.1.1 d.141.1.1 PDB: 1vq4_E* 1vq5_E* 1vq6_E* 1vq7_E* 1s72_E* 1vq9_E* 1vqk_E* 1vql_E* 1vqm_E* 1vqn_E* 1vqo_E* 1vqp_E* 1yhq_E* 1yi2_E* 1yij_E* 1yit_E* 1yj9_E* 1yjn_E* 1yjw_E* 2otj_E* ...
Probab=34.99 E-value=73 Score=25.14 Aligned_cols=46 Identities=15% Similarity=0.175 Sum_probs=30.4
Q ss_pred cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeC
Q 028228 106 KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPK 177 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK 177 (212)
|+.++|+++++ .++|+|.+ |...+.|. +. .++...++| .|.|..+.
T Consensus 9 P~gV~v~i~~~-~vtVkGpk------------------G~L~~~~~-~~-----~v~i~~~~~-~i~v~~~~ 54 (178)
T 1vq8_E 9 PEDVDAEQDHL-DITVEGDN------------------GSVTRRLW-YP-----DIDVSVDGD-TVVIESDE 54 (178)
T ss_dssp CTTCEEEEETT-EEEEEETT------------------EEEEEECC-CT-----TCEEEEETT-EEEEECSC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEEEEE-CC-----eEEEEEECC-EEEEEcCC
Confidence 47789999987 89999963 33444332 22 344556788 88777654
No 43
>3j21_F 50S ribosomal protein L6P; archaea, archaeal, KINK-turn, protein synthe ribosome; 6.60A {Pyrococcus furiosus}
Probab=33.10 E-value=66 Score=25.49 Aligned_cols=19 Identities=32% Similarity=0.375 Sum_probs=15.4
Q ss_pred cCcEEEEEeCCeEEEEEEEe
Q 028228 106 KNQVQVSVENGKIVEISGQW 125 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~ 125 (212)
|+.++|+++++ .++|+|.+
T Consensus 14 P~gV~v~i~~~-~V~VkGpk 32 (184)
T 3j21_F 14 PEGVEVTVEGY-KVKVKGPK 32 (184)
T ss_dssp CSSCEEEESSS-EEEEECSS
T ss_pred CCCcEEEEeCC-EEEEEcCC
Confidence 47889999877 89999863
No 44
>2kgs_A Uncharacterized protein RV0899/MT0922; outer membrane protein A, BON DO cell membrane, membrane, transmembrane, membrane protein; NMR {Mycobacterium tuberculosis} PDB: 2ksm_A
Probab=32.05 E-value=35 Score=25.31 Aligned_cols=26 Identities=12% Similarity=0.288 Sum_probs=22.7
Q ss_pred cCCCCcCcEEEEEeCCeEEEEEEEeec
Q 028228 101 LPGVGKNQVQVSVENGKIVEISGQWKE 127 (212)
Q Consensus 101 lPG~~~edI~V~v~~~~~L~I~g~~~~ 127 (212)
-|.+++-.|.|.+++| .++++|.-..
T Consensus 2 ~~~~~p~~i~V~v~~G-~VTLsG~Vp~ 27 (132)
T 2kgs_A 2 ASALSLSLLSISRSGN-TVTLIGDFPD 27 (132)
T ss_dssp CCCCCEEEEEEEECSS-EEEEEEEESC
T ss_pred CCcccceeEEEEEECC-EEEEEEECCC
Confidence 4778888999999999 8999999765
No 45
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=31.54 E-value=61 Score=22.80 Aligned_cols=35 Identities=29% Similarity=0.226 Sum_probs=29.6
Q ss_pred CceEEEEEecCC-CCcCcEEEEEeCCeEEEEEEEeec
Q 028228 92 DQAYVLKAELPG-VGKNQVQVSVENGKIVEISGQWKE 127 (212)
Q Consensus 92 ~~~y~v~~dlPG-~~~edI~V~v~~~~~L~I~g~~~~ 127 (212)
+..|.+.++|++ +.+++-..++.++ .|.|.=.+.+
T Consensus 53 ~~~y~~~~~L~~~I~~e~s~~~~~~~-~l~i~L~K~~ 88 (114)
T 1rl1_A 53 GEDYNLKLELLHPIIPEQSTFKVLST-KIEIKLKKPE 88 (114)
T ss_dssp SSEEEEEECBSSCCCGGGEEEEECSS-SEEEEEECSS
T ss_pred CcEEEEEeeCCCcCCccccEEEEECC-EEEEEEEcCC
Confidence 568999999997 6999999999988 6888876654
No 46
>1ew4_A CYAY protein; friedreich ataxia, frataxin family, iron homeostasis, unknown function; 1.40A {Escherichia coli} SCOP: d.82.2.1 PDB: 2eff_A 2p1x_A 1soy_A
Probab=29.73 E-value=34 Score=24.67 Aligned_cols=25 Identities=12% Similarity=0.187 Sum_probs=18.1
Q ss_pred CeEEEEeCCCEEEEEEeCCCCCceeeccC
Q 028228 160 KTEAYLSNDVFLEIRIPKNPSTCDISHGN 188 (212)
Q Consensus 160 ~i~A~~~nGgvL~I~lPK~~~~r~I~I~~ 188 (212)
.+.+.+.+| ||+|+++. .-+|-|+.
T Consensus 29 d~D~e~~~g-VLti~f~~---~~~~VINk 53 (106)
T 1ew4_A 29 DIDCEINGG-VLTITFEN---GSKIIINR 53 (106)
T ss_dssp CCEEEEETT-EEEEECTT---SCEEEEEE
T ss_pred CEeeeccCC-EEEEEECC---CCEEEEeC
Confidence 477889888 99999974 33555554
No 47
>2nwt_A UPF0165 protein AF_2212; HOMO dimer protein, GFT structural genomics, PSI-2, protein structure initiative; NMR {Archaeoglobus fulgidus} SCOP: b.129.2.2
Probab=29.72 E-value=35 Score=22.93 Aligned_cols=14 Identities=21% Similarity=0.233 Sum_probs=11.7
Q ss_pred CCeEEEEeCCCEEEE
Q 028228 159 RKTEAYLSNDVFLEI 173 (212)
Q Consensus 159 ~~i~A~~~nGgvL~I 173 (212)
..|.|.|+|| ||.-
T Consensus 3 k~IeAiYEnG-VfkP 16 (69)
T 2nwt_A 3 KIIEAVYENG-VFKP 16 (69)
T ss_dssp CCEEEEEETT-EEEE
T ss_pred ceEEEEEECC-EEeE
Confidence 4689999999 8864
No 48
>2ks0_A Uncharacterized protein; YABP family, structural genomi 2, protein structure initiative, northeast structural genom consortium; NMR {Desulfitobacterium hafniense} PDB: 2kyi_A 3ipf_A
Probab=29.15 E-value=32 Score=23.18 Aligned_cols=23 Identities=13% Similarity=0.328 Sum_probs=19.4
Q ss_pred CCCcCcEEEEEeCCeEEEEEEEee
Q 028228 103 GVGKNQVQVSVENGKIVEISGQWK 126 (212)
Q Consensus 103 G~~~edI~V~v~~~~~L~I~g~~~ 126 (212)
-|+.+.|.+...-| .|.|+|+.=
T Consensus 17 sFd~e~i~L~T~~G-~L~IkG~~L 39 (71)
T 2ks0_A 17 SFDPKEILLETIQG-VLSIKGEKL 39 (71)
T ss_dssp EECSSEEEEEETTE-EEEEEEECC
T ss_pred EECCCEEEEEeCce-EEEEEcCCc
Confidence 46789999999988 899999853
No 49
>2uwa_A Cellulase; glycoside hydrolase, xyloglucan-endo-transferase, hydrolase, glycosidase, family GH16, tropaeolum majus xyloglucanase; 1.8A {Tropaeolum majus} PDB: 2uwc_A 2uwb_A 2vh9_A*
Probab=27.48 E-value=1.2e+02 Score=25.27 Aligned_cols=44 Identities=14% Similarity=0.110 Sum_probs=27.4
Q ss_pred CcCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCC
Q 028228 105 GKNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPED 155 (212)
Q Consensus 105 ~~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~ 155 (212)
.++++.| ++| .|.|++.+.. ...........+|.|+-+++||.+
T Consensus 31 ~~~Nv~v--~~G-~L~L~~~k~t----sa~i~Sk~~~~yG~~Ear~Klp~g 74 (274)
T 2uwa_A 31 GPQHQRV--DQG-SLTIWLDSTS----GSGFKSINRYRSGYFGANIKLQSG 74 (274)
T ss_dssp CGGGEEE--ETT-EEEEEECSSC----CEEEEEEEEEEEEEEEEEEECCCS
T ss_pred CCCCEEE--ECC-EEEEEEecCC----CCEEEECceEeeEEEEEEEEeCCC
Confidence 4556665 677 6888875421 111222334567999999999975
No 50
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=27.36 E-value=75 Score=23.21 Aligned_cols=31 Identities=10% Similarity=0.084 Sum_probs=23.9
Q ss_pred eEEEEEECCCCcccCCeEEEEeCCCEEEEEEe
Q 028228 145 GFVRRLELPEDADWRKTEAYLSNDVFLEIRIP 176 (212)
Q Consensus 145 ~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lP 176 (212)
...-+|.||.+++.+.+...+... -|.|.+.
T Consensus 15 ~V~i~I~lp~~~~~kdv~V~i~~~-~l~v~~~ 45 (131)
T 2o30_A 15 EINIQFPVTGDADSSAIKIRMVGK-KICVKNQ 45 (131)
T ss_dssp EEEEEEECC---CCSCEEEEEETT-EEEEEET
T ss_pred EEEEEEECCCCCCccceEEEEECC-EEEEEEC
Confidence 456679999999999999999999 9999873
No 51
>3v2d_H 50S ribosomal protein L6; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_F 2hgj_H 2hgq_H 2hgu_H 1vsa_F 2j03_H 2jl6_H 2jl8_H 2v47_H 2v49_H 2wdi_H 2wdj_H 2wdl_H 2wdn_H 2wh2_H 2wh4_H 2wrj_H 2wrl_H 2wro_H 2wrr_H ...
Probab=25.71 E-value=1.3e+02 Score=23.63 Aligned_cols=43 Identities=14% Similarity=0.222 Sum_probs=29.2
Q ss_pred cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEeCCCEEEEEE
Q 028228 106 KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRI 175 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~l 175 (212)
|+.|+|+++++ .++|+|.+ |...+. |+.. |+-.++++ .|.|..
T Consensus 12 P~gV~v~i~~~-~v~VkGpk------------------G~L~~~--~~~~-----v~i~~~~~-~l~v~~ 54 (180)
T 3v2d_H 12 PKGVSVEVAPG-RVKVKGPK------------------GELEVP--VSPE-----MRVVVEEG-VVRVER 54 (180)
T ss_dssp CTTCEEEEETT-EEEEECSS------------------CEEEEE--CCTT-----SEEEEETT-EEEEEC
T ss_pred CCCcEEEEeCC-EEEEEeCC------------------cEEEEE--eCCC-----EEEEEECC-EEEEEE
Confidence 57899999987 89999863 334443 3433 44456778 888874
No 52
>3h0x_A 78 kDa glucose-regulated protein homolog; structural genomics, APC89502.3, peptide binding, chaperone, BIP, PSI-2; 1.92A {Saccharomyces cerevisiae} PDB: 1ckr_A 7hsc_A
Probab=24.62 E-value=2.2e+02 Score=21.24 Aligned_cols=40 Identities=28% Similarity=0.410 Sum_probs=27.1
Q ss_pred ceeEEEc------CceEEEEEecCCCCcC-----cEEEEEe---CCeEEEEEEEe
Q 028228 85 SVDWLQT------DQAYVLKAELPGVGKN-----QVQVSVE---NGKIVEISGQW 125 (212)
Q Consensus 85 ~~di~e~------~~~y~v~~dlPG~~~e-----dI~V~v~---~~~~L~I~g~~ 125 (212)
.+.|++. ++.++-.+.|.|+.+. .|+|.+. +| .|.|++..
T Consensus 48 ~i~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~I~Vtf~iD~nG-iL~V~a~d 101 (152)
T 3h0x_A 48 MIKVYEGERAMSKDNNLLGKFELTGIPPAPRGVPQIEVTFALDANG-ILKVSATD 101 (152)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTS-EEEEEEEE
T ss_pred eeeEEEcCccccccCcEEEEEEEeCCCCCCCCCceEEEEEEEcCCC-EEEEEEEE
Confidence 4566664 4577778888888642 3555554 56 99999974
No 53
>3iz5_F 60S ribosomal protein L9 (L6P); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum} PDB: 3izr_F
Probab=23.57 E-value=1.7e+02 Score=23.18 Aligned_cols=19 Identities=26% Similarity=0.401 Sum_probs=15.9
Q ss_pred cCcEEEEEeCCeEEEEEEEe
Q 028228 106 KNQVQVSVENGKIVEISGQW 125 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~ 125 (212)
|+.++|++.++ .++|+|.+
T Consensus 13 P~gV~v~i~~~-~V~VkGPk 31 (190)
T 3iz5_F 13 PEGVTVQVAAK-VVTVEGPR 31 (190)
T ss_dssp CTTCEEEEETT-EEEEEETT
T ss_pred CCCCEEEEeCC-EEEEECCC
Confidence 57899999987 89999963
No 54
>3iln_A Laminarinase; jelly ROW, hydrolase, family 16 glycosyl hydrolase; 1.95A {Rhodothermus marinus}
Probab=23.34 E-value=2e+02 Score=23.21 Aligned_cols=41 Identities=22% Similarity=0.437 Sum_probs=25.1
Q ss_pred EEEeCCeEEEEEEEeecccCCCCCceEEeE--------EEeeeEEEEEECCCC
Q 028228 111 VSVENGKIVEISGQWKEQRDPRAKDWRSGH--------WWEHGFVRRLELPED 155 (212)
Q Consensus 111 V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e--------~~~g~F~R~~~LP~~ 155 (212)
|.+.+| .|+|++.+... .+..|.+.+ ..+|.|+-+++||..
T Consensus 49 v~v~~G-~L~i~~~~~~~---~~~~~tS~~i~t~~~~~~~yG~~e~r~k~p~g 97 (251)
T 3iln_A 49 ARVGGG-VLIIEARRESY---EGREYTSARLVTRGKASWTYGRFEIRARLPSG 97 (251)
T ss_dssp EEEETT-EEEEEEEEEEE---TTEEEEECEEECTTTCCBSSEEEEEEEECCCS
T ss_pred EEEECC-EEEEEEEeccC---CCCCEEEEEEEECCcccccceEEEEEEEccCC
Confidence 445678 79999876531 111333332 235889999999964
No 55
>2op6_A Heat shock 70 kDa protein D; HSP70/peptide-binding domain, structural genomics, APC90014. 2, protein structure initiative; 1.85A {Caenorhabditis elegans}
Probab=22.21 E-value=2.4e+02 Score=20.76 Aligned_cols=40 Identities=20% Similarity=0.394 Sum_probs=26.0
Q ss_pred CceeEEEcC------ceEEEEEecCCCCc-----CcEEEEE--e-CCeEEEEEEE
Q 028228 84 SSVDWLQTD------QAYVLKAELPGVGK-----NQVQVSV--E-NGKIVEISGQ 124 (212)
Q Consensus 84 p~~di~e~~------~~y~v~~dlPG~~~-----edI~V~v--~-~~~~L~I~g~ 124 (212)
-.+.|++.+ +.+.-.+.|.|+.+ ..|+|.+ + +| .|.|++.
T Consensus 47 v~i~v~qGe~~~~~~n~~lg~~~l~gipp~p~G~~~I~V~f~id~nG-iL~V~a~ 100 (152)
T 2op6_A 47 VSIVIYEGERPMVMDNHKLGNFDVTGIPPAPRGVPQIEVTFEIDVNG-ILHVSAE 100 (152)
T ss_dssp EEEEEEESSCSBGGGSEEEEEEEECCCCCCCTTCSCEEEEEEECTTS-CEEEEEE
T ss_pred EEEEEEEeCCccCccCCEeEEEEEECCCCCCCCCceEEEEEEECCCc-EEEEEEE
Confidence 456777653 56777788887754 1355544 4 55 8999986
No 56
>2zkr_e 60S ribosomal protein L9; protein-RNA complex, 60S ribosomal subunit, ribosomal protein/RNA complex; 8.70A {Canis familiaris}
Probab=21.63 E-value=1.3e+02 Score=23.95 Aligned_cols=19 Identities=16% Similarity=0.359 Sum_probs=16.2
Q ss_pred cCcEEEEEeCCeEEEEEEEe
Q 028228 106 KNQVQVSVENGKIVEISGQW 125 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~ 125 (212)
|+.++|+++++ .++|+|.+
T Consensus 13 P~gV~V~i~~~-~VtVkGpk 31 (192)
T 2zkr_e 13 PENVDITLKGR-TVIVKGPR 31 (192)
T ss_dssp CTTCEEEEETT-EEEEEETT
T ss_pred CCCCEEEEeCC-EEEEECCC
Confidence 67889999987 89999963
No 57
>3bbo_I Ribosomal protein L6; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=20.71 E-value=43 Score=27.49 Aligned_cols=47 Identities=13% Similarity=0.302 Sum_probs=30.1
Q ss_pred cCcEEEEEeCCeEEEEEEEeecccCCCCCceEEeEEEeeeEEEEEECCCCcccCCeEEEEeCCCEEEEEEeCC
Q 028228 106 KNQVQVSVENGKIVEISGQWKEQRDPRAKDWRSGHWWEHGFVRRLELPEDADWRKTEAYLSNDVFLEIRIPKN 178 (212)
Q Consensus 106 ~edI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~e~~~g~F~R~~~LP~~vd~~~i~A~~~nGgvL~I~lPK~ 178 (212)
|+.|+|+++++ .|+|+|.+ |...+ .|+..|+.. ..++| .|.|..+..
T Consensus 54 P~gV~V~i~~~-~VtVKGPk------------------G~L~~--~~~~~v~i~----~~e~~-~i~v~~~~~ 100 (223)
T 3bbo_I 54 PSNVTIALEGQ-DLKVKGPL------------------GELAL--TYPREVELT----KEESG-FLRVKKTVE 100 (223)
T ss_dssp STTSCEEESSS-EEEECCSS------------------CCEEE--ECCSSCEEE----ECSSS-CEEEECSSC
T ss_pred CCCCEEEEeCC-EEEEECCC------------------eEEEE--EcCCCEEEE----EecCC-EEEEEcCCC
Confidence 57788999887 89999963 23433 335444331 45677 888776553
No 58
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=20.71 E-value=1.2e+02 Score=21.83 Aligned_cols=32 Identities=13% Similarity=0.257 Sum_probs=27.1
Q ss_pred eeEEEEEECCCCc-ccCCeEEEEeCCCEEEEEEe
Q 028228 144 HGFVRRLELPEDA-DWRKTEAYLSNDVFLEIRIP 176 (212)
Q Consensus 144 g~F~R~~~LP~~v-d~~~i~A~~~nGgvL~I~lP 176 (212)
....-+|.||.++ +.+.+...++.. -|+|.+.
T Consensus 29 ~~V~i~I~lp~~~~~~kdv~V~i~~~-~l~v~~~ 61 (124)
T 1wgv_A 29 TDLEVRVPVPKHVVKGKQVSVALSSS-SIRVAML 61 (124)
T ss_dssp TEEEEEEECCTTCCSGGGEEEEECSS-EEEEEEE
T ss_pred cEEEEEEEcCCCCCchhheEEEEEcC-EEEEEEE
Confidence 3466779999888 999999999999 9999883
No 59
>4awd_A Beta-porphyranase; hydrolase; 2.40A {Bacteroides plebeius}
Probab=20.54 E-value=1.3e+02 Score=25.85 Aligned_cols=48 Identities=17% Similarity=0.177 Sum_probs=30.0
Q ss_pred CcCcEEEEEeCCeEEEEEEEeeccc---CCC-CCceE-------Ee--EEEeeeEEEEEECCCC
Q 028228 105 GKNQVQVSVENGKIVEISGQWKEQR---DPR-AKDWR-------SG--HWWEHGFVRRLELPED 155 (212)
Q Consensus 105 ~~edI~V~v~~~~~L~I~g~~~~~~---~~~-~~~~~-------~~--e~~~g~F~R~~~LP~~ 155 (212)
+++++.|+ +| .|+|++.+.... ... ...|. .. ...+|.|+-+++||..
T Consensus 85 ~~~Nv~v~--dG-~L~I~a~~~~~~~~~~G~~~~~ytsasg~i~Sk~~~~~yG~~E~r~Klp~~ 145 (324)
T 4awd_A 85 KAENVSVK--KG-CLRIINTVLSPTEGLDGKPGDKYRLAGGAVASVKNQAHYGYYETRMKASLT 145 (324)
T ss_dssp CGGGEEEE--TT-EEEEECEEEEEEECGGGCBSSSEEEEECEEEESCCCBCSEEEEEEEECCSS
T ss_pred cchhEEEE--CC-EEEEEEEeCCCCcccCCcccccEEEEEEEEEECCccccCcEEEEEEECCCC
Confidence 56776654 88 899999876421 110 01232 22 1456899999999975
No 60
>1q5l_A Chaperone protein DNAK; HSP70, chaperone, heat shock protein; NMR {Escherichia coli} SCOP: b.130.1.1
Probab=20.47 E-value=2.5e+02 Score=20.42 Aligned_cols=43 Identities=23% Similarity=0.354 Sum_probs=28.1
Q ss_pred CceeEEEc------CceEEEEEecCCCCcC-----cEEEEEe--CCeEEEEEEEee
Q 028228 84 SSVDWLQT------DQAYVLKAELPGVGKN-----QVQVSVE--NGKIVEISGQWK 126 (212)
Q Consensus 84 p~~di~e~------~~~y~v~~dlPG~~~e-----dI~V~v~--~~~~L~I~g~~~ 126 (212)
-.+.|++. ++.+.-.+.|.|+.+. .|+|.+. .+..|.|+++..
T Consensus 64 v~I~VyqGe~~~~~~n~~Lg~f~l~gipp~p~G~~~IeVtf~iD~nGiL~V~a~d~ 119 (135)
T 1q5l_A 64 VTIHVLQGERKRAADNKSLGQFNLDGINPAPRGMPQIEVTFDIDADGILHVSAKDK 119 (135)
T ss_dssp CEEEEEECCSSSCSSSEEEEEEECCCCCSCCSSSCCEEEEEEECTTSEEEEEEEET
T ss_pred EEEEEEEeCCcccccCcEEEEEEEeCCCCCCCceeEEEEEEEECCCCEEEEEEEEC
Confidence 45677775 3577778888887541 3555554 333899999743
No 61
>3jx8_A Putative lipoprotein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.16A {Parabacteroides distasonis atcc 8503}
Probab=20.21 E-value=1.1e+02 Score=24.73 Aligned_cols=43 Identities=19% Similarity=0.188 Sum_probs=31.2
Q ss_pred CCceeEEEcCceEEEEEecCCCCcCcEEEEEeCCeEEEEEEEee
Q 028228 83 QSSVDWLQTDQAYVLKAELPGVGKNQVQVSVENGKIVEISGQWK 126 (212)
Q Consensus 83 ~p~~di~e~~~~y~v~~dlPG~~~edI~V~v~~~~~L~I~g~~~ 126 (212)
...+.+...++++.|+++-+-=-.+.|++.+.++ +|.|.-+..
T Consensus 31 ~~~V~l~qgd~~~~V~i~~~~nl~~~i~~~v~~g-~L~I~~~~~ 73 (250)
T 3jx8_A 31 SADFEYEQSDKAPYLSVTIDENLFDYLVTEVEGG-TLKIYPKSI 73 (250)
T ss_dssp SCEEEEEECSSCCEEEEEEEGGGGGGEEEEEETT-EEEEEECBC
T ss_pred CEEEEEEECCCCceEEEEECccccceEEEEEECC-EEEEEEcCC
Confidence 3456666665567777776655568899999998 899987643
No 62
>3dob_A Heat shock 70 kDa protein F44E5.5; structural genomics, APC90015.11, peptide-binding domain, HS 2, protein structure initiative; 2.39A {Caenorhabditis elegans}
Probab=20.13 E-value=2e+02 Score=21.49 Aligned_cols=40 Identities=28% Similarity=0.420 Sum_probs=25.9
Q ss_pred ceeEEEc------CceEEEEEecCCCCcC-----cEEEEEe---CCeEEEEEEEe
Q 028228 85 SVDWLQT------DQAYVLKAELPGVGKN-----QVQVSVE---NGKIVEISGQW 125 (212)
Q Consensus 85 ~~di~e~------~~~y~v~~dlPG~~~e-----dI~V~v~---~~~~L~I~g~~ 125 (212)
.+.|++. ++.++-.+.|.|+.+- .|+|.+. +| .|.|++..
T Consensus 48 ~I~VyqGe~~~~~dn~~LG~f~l~gipp~p~G~~~IeVtf~iD~nG-iL~Vsa~d 101 (152)
T 3dob_A 48 SIQVYEGERAMTRDNHRLGTFELSGIPPAPRGVPQIEVTFNIDANG-ILNVSAED 101 (152)
T ss_dssp EEEEEESSCSBGGGSEEEEEEEEECCCCCCTTCCCEEEEEEECTTC-CEEEEEEE
T ss_pred EEEEEEcCccccccCceeEEEEEeCCCCCCCCCceEEEEEEeCCCC-eEEEEEEE
Confidence 4566664 4567777888777542 3555544 55 89999974
No 63
>2w39_A Putative laminarinase; hydrolase, white ROT fungus, glycosyl hydrolase, GH7, GH16, LAM16A, family 16, beta-glucan, basidiomycete; HET: NAG BGC LGC; 1.10A {Phanerochaete chrysosporium} PDB: 2cl2_A* 2w52_A* 2wlq_A* 2wne_A*
Probab=20.12 E-value=2.1e+02 Score=23.98 Aligned_cols=13 Identities=23% Similarity=0.376 Sum_probs=9.7
Q ss_pred eeeEEEEE-ECCCC
Q 028228 143 EHGFVRRL-ELPED 155 (212)
Q Consensus 143 ~g~F~R~~-~LP~~ 155 (212)
+|.|+-++ .||..
T Consensus 82 yG~~e~r~ak~p~g 95 (298)
T 2w39_A 82 THVAVFDVRHMPQG 95 (298)
T ss_dssp SEEEEEEEEECCCS
T ss_pred CEEEEEEEeccCCC
Confidence 47788886 88864
Done!