BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028229
(212 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1Z9H|A Chain A, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|B Chain B, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|C Chain C, Microsomal Prostaglandin E Synthase Type-2
pdb|1Z9H|D Chain D, Microsomal Prostaglandin E Synthase Type-2
pdb|2PBJ|A Chain A, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|B Chain B, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|C Chain C, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
pdb|2PBJ|D Chain D, Gsh-Heme Bound Microsomal Prostaglandin E Synthase
Length = 290
Score = 87.8 bits (216), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 42/72 (58%), Positives = 57/72 (79%), Gaps = 4/72 (5%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMV-DGE--- 142
++ LYQY+ CPFC+KV+AFLD++ +PY+VVEVNP+ + EIK+S Y+KVPIL+ +GE
Sbjct: 14 QLTLYQYKTCPFCSKVRAFLDFHALPYQVVEVNPVLRAEIKFSSYRKVPILVAQEGESSQ 73
Query: 143 QLVDSSAIIDQL 154
QL DSS II L
Sbjct: 74 QLNDSSVIISAL 85
>pdb|2E7P|A Chain A, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|B Chain B, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|C Chain C, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
pdb|2E7P|D Chain D, Crystal Structure Of The Holo Form Of Glutaredoxin C1 From
Populus Tremula X Tremuloides
Length = 116
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE------IKWSEYKKVPILMVDG 141
VV++ C +CN+VK L YKVVE++ ++ W+ VP + + G
Sbjct: 22 VVVFSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGG 81
Query: 142 EQLVDSSAIIDQ 153
+Q+ ++++
Sbjct: 82 KQIGGCDTVVEK 93
>pdb|1Z7P|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From Populus
Tremula X Tremuloides
pdb|1Z7R|A Chain A, Solution Structure Of Reduced Glutaredoxin C1 From Populus
Tremula X Tremuloides
Length = 117
Score = 38.1 bits (87), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/72 (25%), Positives = 35/72 (48%), Gaps = 6/72 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE------IKWSEYKKVPILMVDG 141
VV++ C +CN+VK L YKVVE++ ++ W+ VP + + G
Sbjct: 23 VVVFSKTYCGYCNRVKQLLTQVGASYKVVELDELSDGSQLQSALAHWTGRGTVPNVFIGG 82
Query: 142 EQLVDSSAIIDQ 153
+Q+ ++++
Sbjct: 83 KQIGGCDTVVEK 94
>pdb|4G10|A Chain A, Ligg From Sphingobium Sp. Syk-6 Is Related To The
Glutathione Transferase Omega Class
Length = 265
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 42/79 (53%), Gaps = 7/79 (8%)
Query: 85 PKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYK-----KVPILMV 139
P+E+ +Y CPF +V+ L+ + K VE++ I+K W K +P+L V
Sbjct: 4 PQELTIYHIPGCPFSERVEIXLELKGLRXKDVEID-ISKPRPDWLLAKTGGTTALPLLDV 62
Query: 140 D-GEQLVDSSAIIDQLDQK 157
+ GE L +S I+ L+Q+
Sbjct: 63 ENGESLKESXVILRYLEQR 81
>pdb|1G7O|A Chain A, Nmr Solution Structure Of Reduced E. Coli Glutaredoxin 2
Length = 215
Score = 37.4 bits (85), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 49/97 (50%), Gaps = 10/97 (10%)
Query: 90 LYQYEACPFCNKVKAFLDYYDIPYKV-VEVNPINKKEIKWSEYKKVPILMVDGEQLVDSS 148
LY Y+ CP+C K + +IP ++ V +N + + K+VPIL D + + S
Sbjct: 3 LYIYDHCPYCLKARMIFGLKNIPVELHVLLNDDAETPTRMVGQKQVPILQKDDSRYMPES 62
Query: 149 AII----DQLDQK--LTPKRKADSPSGDDEEKKWRGY 179
I D+LD K LT KR SP+ ++ +K GY
Sbjct: 63 MDIVHYVDKLDGKPLLTGKR---SPAIEEWLRKVNGY 96
>pdb|3IR4|A Chain A, 1.2 Angstrom Crystal Structure Of The Glutaredoxin 2
(Grxb) From Salmonella Typhimurium In Complex With
Glutathione
Length = 218
Score = 35.8 bits (81), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 47/100 (47%), Gaps = 16/100 (16%)
Query: 90 LYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE----IKWSEYKKVPILMVDGEQLV 145
LY Y+ CPFC K + +IP VE+N + + + K VPIL D + +
Sbjct: 6 LYIYDHCPFCVKARXIFGLKNIP---VELNVLQNDDEATPTRXIGQKXVPILQKDDSRYL 62
Query: 146 DSSAII----DQLDQK--LTPKRKADSPSGDDEEKKWRGY 179
S I D LD K LT KR +P+ ++ +K GY
Sbjct: 63 PESXDIVHYVDNLDGKPLLTGKR---NPAIEEWLRKVNGY 99
>pdb|2X8C|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8C|B Chain B, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
With The Reduced C-Terminal End
pdb|2X8G|A Chain A, Oxidized Thioredoxin Glutathione Reductase From
Schistosoma Mansoni
pdb|2X8H|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Gsh
pdb|2X99|A Chain A, Thioredoxin Glutathione Reductase From Schistosoma Mansoni
In Complex With Nadph
Length = 598
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|2V6O|A Chain A, Structure Of Schistosoma Mansoni Thioredoxin-Glutathione
Reductase (Smtgr)
Length = 596
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|3H4K|A Chain A, Crystal Structure Of The Wild Type Thioredoxin Glutatione
Reductase From Schistosoma Mansoni In Complex With
Auranofin
Length = 598
Score = 35.0 bits (79), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 35/70 (50%), Gaps = 6/70 (8%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVN------PINKKEIKWSEYKKVPILMVDG 141
V+L+ CP+C KVK L I + +E++ I K +S+ + VP + V G
Sbjct: 20 VILFSKTTCPYCKKVKDVLAEAKIKHATIELDQLSNGSAIQKCLASFSKIETVPQMFVRG 79
Query: 142 EQLVDSSAII 151
+ + DS ++
Sbjct: 80 KFIGDSQTVL 89
>pdb|3UBK|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans
pdb|3UBK|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans
pdb|3UBL|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans With Gsh Bound
pdb|3UBL|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501770) From Leptospira Interrogans With Gsh Bound
Length = 242
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 41/73 (56%), Gaps = 3/73 (4%)
Query: 98 FCNKVKAFLDYYDIPYKVVEVNPINKKE-IKWSEYKKVPILMVDGEQLVDSSAIIDQLDQ 156
+ NKVK + + Y+ + + P +++ +K S K+P+L +DG+ + +S AI++ LD
Sbjct: 14 YVNKVKLGILEKGLEYEQIRIAPSQEEDFLKISPMGKIPVLEMDGKFIFESGAILEFLDT 73
Query: 157 KL--TPKRKADSP 167
TPK + P
Sbjct: 74 IFPQTPKLIPEDP 86
>pdb|3NIV|A Chain A, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|B Chain B, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|C Chain C, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
pdb|3NIV|D Chain D, The Crystal Structure Of Glutathione S-Transferase From
Legionella Pneumophila
Length = 222
Score = 34.7 bits (78), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 24/76 (31%), Positives = 41/76 (53%), Gaps = 7/76 (9%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKK------VPILMVD 140
++LY Y C +V+ L+ I Y+ +EV+ +N + S +Y + VP L ++
Sbjct: 3 LILYDYFRSTACYRVRIALNLKKIAYEKIEVHLVNNGGEQHSLQYHQINPQELVPSLDIN 62
Query: 141 GEQLVDSSAIIDQLDQ 156
G+ L S AIID L++
Sbjct: 63 GQILSQSXAIIDYLEE 78
>pdb|1FOV|A Chain A, Glutaredoxin 3 From Escherichia Coli In The Fully Oxidized
Form
Length = 82
Score = 33.9 bits (76), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKV--VEVNPINKKE-IKWSEYKKVPILMVDGEQL 144
V +Y E CP+C++ KA L + ++ ++ N ++E IK S VP + +D + +
Sbjct: 3 VEIYTKETCPYCHRAKALLSSKGVSFQELPIDGNAAKREEMIKRSGRTTVPQIFIDAQHI 62
>pdb|4J2F|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Ricinus Communis, Target Efi-501866
Length = 223
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/63 (31%), Positives = 35/63 (55%), Gaps = 3/63 (4%)
Query: 97 PFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE---YKKVPILMVDGEQLVDSSAIIDQ 153
PF +V L IPY+ VE + NK + +KK+P+L+ G+ + +S+ I++
Sbjct: 14 PFSCRVIWALKLKGIPYEYVEEDLFNKSPLLLQYNPVHKKIPVLVHGGKPICESTIILEY 73
Query: 154 LDQ 156
LD+
Sbjct: 74 LDE 76
>pdb|3RBT|A Chain A, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|B Chain B, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|C Chain C, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
pdb|3RBT|D Chain D, Crystal Structure Of Glutathione S-Transferase Omega 3
From The Silkworm Bombyx Mori
Length = 246
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 44/89 (49%), Gaps = 10/89 (11%)
Query: 79 LPTDLVPKEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYK----KV 134
+P + ++ LY + P+ ++V L+ I Y+V ++P+ E W K K+
Sbjct: 18 IPPPALTDKLRLYHVDMNPYGHRVLLVLEAKRIKYEVYRLDPLRLPE--WFRAKNPRLKI 75
Query: 135 PILMVDGEQ----LVDSSAIIDQLDQKLT 159
P+L + +Q L +S I D LD+K T
Sbjct: 76 PVLEIPTDQGDRFLFESVVICDYLDEKYT 104
>pdb|2M46|A Chain A, Solution Nmr Structure Of Sacol0876 From Staphylococcus
Aureus Col, Nesg Target Zr353 And Csgid Target Idp00841
Length = 142
Score = 32.0 bits (71), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 18/31 (58%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV 118
+ YQY+ C C K FLD Y + Y+ +++
Sbjct: 26 IKFYQYKNCTTCKKAAKFLDEYGVSYEPIDI 56
>pdb|1WJK|A Chain A, Solution Structure Of Hypothetical Protein C330018d20rik
From Mus Musculus
Length = 100
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 39/83 (46%), Gaps = 5/83 (6%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKK--VPILMVDGEQLV 145
+ L+ CP C++ K L Y + + EV+ + W E K +P+ ++G+ L+
Sbjct: 19 LTLFTKAPCPLCDEAKEVLQPYKDRFILQEVDITLPENSTWYERYKFDIPVFHLNGQFLM 78
Query: 146 DSSAIIDQLDQKLTPKRKADSPS 168
+L+++L RK PS
Sbjct: 79 MHRVNTSKLEKQL---RKLSGPS 98
>pdb|2KLX|A Chain A, Solution Structure Of Glutaredoxin From Bartonella
Henselae Str. Houston
Length = 89
Score = 30.8 bits (68), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 23/41 (56%)
Query: 86 KEVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEI 126
KE++LY CP+C + + LD + Y ++ + ++E+
Sbjct: 6 KEIILYTRPNCPYCKRARDLLDKKGVKYTDIDASTSLRQEM 46
>pdb|1FW1|A Chain A, Glutathione Transferase ZetaMALEYLACETOACETATE ISOMERASE
Length = 216
Score = 30.8 bits (68), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 41/87 (47%), Gaps = 8/87 (9%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE-------YKKVPILMVDG 141
+LY Y +V+ L I YK V +N I ++S+ K+VP L +DG
Sbjct: 7 ILYSYFRSSCSWRVRIALALKGIDYKTVPINLIKDGGQQFSKDFQALNPMKQVPTLKIDG 66
Query: 142 EQLVDSSAIIDQLDQ-KLTPKRKADSP 167
+ S AII+ L++ + TP+ P
Sbjct: 67 ITIHQSLAIIEYLEETRPTPRLLPQDP 93
>pdb|2CZ2|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-1
Crystal)
pdb|2CZ3|A Chain A, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
pdb|2CZ3|B Chain B, Crystal Structure Of Glutathione Transferase Zeta 1-1
(Maleylacetoacetate Isomerase) From Mus Musculus (Form-2
Crystal)
Length = 223
Score = 30.4 bits (67), Expect = 0.72, Method: Compositional matrix adjust.
Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE-------YKKVPILMVDG 141
+LY Y +V+ L I Y++V +N I +++E K+VP L +DG
Sbjct: 14 ILYSYFRSSCSWRVRIALALKGIDYEIVPINLIKDGGQQFTEEFQTLNPXKQVPALKIDG 73
Query: 142 EQLVDSSAIIDQLDQ 156
+V S AI + L++
Sbjct: 74 ITIVQSLAIXEYLEE 88
>pdb|2HT9|A Chain A, The Structure Of Dimeric Human Glutaredoxin 2
pdb|2HT9|B Chain B, The Structure Of Dimeric Human Glutaredoxin 2
Length = 146
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 51 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 110
>pdb|3BBY|A Chain A, Crystal Structure Of Glutathione S-Transferase
(Np_416804.1) From Escherichia Coli K12 At 1.85 A
Resolution
Length = 215
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 14/50 (28%), Positives = 28/50 (56%), Gaps = 3/50 (6%)
Query: 114 KVVEVNPINKKEIKWSEY---KKVPILMVDGEQLVDSSAIIDQLDQKLTP 160
K ++++ + W Y ++VP+L +D +L +SSAI + L+ + P
Sbjct: 37 KTIDLDSGEHLQPTWQGYGQTRRVPLLQIDDFELSESSAIAEYLEDRFAP 86
>pdb|3IC8|A Chain A, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|B Chain B, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|C Chain C, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
pdb|3IC8|D Chain D, The Crystal Structure Of A Gst-Like Protein From
Pseudomonas Syringae To 2.4a
Length = 310
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 16/74 (21%), Positives = 34/74 (45%), Gaps = 3/74 (4%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKK---EIKWSEYKKVPILMVDGEQ 143
E++L+ Y F K + L + + ++ V + I K Y+K P+L + +
Sbjct: 3 ELILHHYPTSLFAEKARLXLGFKGVNWRSVTIPSIXPKPDLTALTGGYRKTPVLQIGADI 62
Query: 144 LVDSSAIIDQLDQK 157
D++ +L+Q+
Sbjct: 63 YCDTALXARRLEQE 76
>pdb|1GWC|A Chain A, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|B Chain B, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
pdb|1GWC|C Chain C, The Structure Of A Tau Class Glutathione S-Transferase
From Wheat, Active In Herbicide Detoxification
Length = 230
Score = 29.6 bits (65), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/63 (28%), Positives = 33/63 (52%), Gaps = 3/63 (4%)
Query: 97 PFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSE---YKKVPILMVDGEQLVDSSAIIDQ 153
PF +VK L + Y+ VE + K E+ +KK+P+L+ +G + +S I+
Sbjct: 16 PFVTRVKLALALKGLSYEDVEEDLYKKSELLLKSNPVHKKIPVLIHNGAPVCESMIILQY 75
Query: 154 LDQ 156
+D+
Sbjct: 76 IDE 78
>pdb|1R7H|A Chain A, Nrdh-Redoxin Of Corynebacterium Ammoniagenes Forms A
Domain- Swapped Dimer
pdb|1R7H|B Chain B, Nrdh-Redoxin Of Corynebacterium Ammoniagenes Forms A
Domain- Swapped Dimer
Length = 75
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 16/58 (27%), Positives = 27/58 (46%), Gaps = 2/58 (3%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE--IKWSEYKKVPILMVDGEQ 143
+ LY AC C K LD + Y V+++ ++ + Y + P++ VDGE
Sbjct: 3 ITLYTKPACVQCTATKKALDRAGLAYNTVDISLDDEARDYVMALGYVQAPVVEVDGEH 60
>pdb|1Z3E|A Chain A, Crystal Structure Of Spx In Complex With The C-Terminal
Domain Of The Rna Polymerase Alpha Subunit
Length = 132
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG 141
V LY +C C K +A+L+ ++IP+ VE N I + + E K++ + DG
Sbjct: 3 VTLYTSPSCTSCRKARAWLEEHEIPF--VERN-IFSEPLSIDEIKQILRMTEDG 53
>pdb|2CQ9|A Chain A, Solution Structure Of Rsgi Ruh-044, An N-Terminal Domain
Of Glutaredoxin 2 From Human Cdna
Length = 130
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 29 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 88
>pdb|3GFK|A Chain A, Crystal Structure Of Bacillus Subtilis SpxRNA POLYMERASE
Alpha Subunit C-Terminal Domain Complex
Length = 131
Score = 29.3 bits (64), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 30/54 (55%), Gaps = 3/54 (5%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDG 141
V LY +C C K +A+L+ ++IP+ VE N I + + E K++ + DG
Sbjct: 2 VTLYTSPSCTSCRKARAWLEEHEIPF--VERN-IFSEPLSIDEIKQILRMTEDG 52
>pdb|2FLS|A Chain A, Crystal Structure Of Human Glutaredoxin 2 Complexed With
Glutathione
Length = 132
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 16/60 (26%), Positives = 27/60 (45%), Gaps = 6/60 (10%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV------NPINKKEIKWSEYKKVPILMVDG 141
VV++ +C +C K ++ YKVVE+ N K + + VP + V+G
Sbjct: 37 VVIFSKTSCSYCTMAKKLFHDMNVNYKVVELDLLEYGNQFQDALYKMTGERTVPRIFVNG 96
>pdb|3TOT|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOT|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000
pdb|3TOU|A Chain A, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
pdb|3TOU|B Chain B, Crystal Structure Of Glutathione Transferase (Target
Efi-501058) From Ralstonia Solanacearum Gmi1000 With Gsh
Bound
Length = 226
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 4/78 (5%)
Query: 95 ACPFCNKVKAFLDYYDIPYKVV--EVNPINKKEIKWSEYKKVPILMV-DGEQLVDSSAII 151
A P+ KV+ L I Y+ V +V + + +++ KVP L++ DG L DS I
Sbjct: 10 ASPYTRKVRVVLAEKKIDYQFVLEDVWNADTQIHQFNPLGKVPCLVMDDGGALFDSRVIA 69
Query: 152 DQLDQKLTPKRKADSPSG 169
+ D L+P + PSG
Sbjct: 70 EYAD-TLSPVARLIPPSG 86
>pdb|4IBP|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound Glutathione
pdb|4ID0|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound Glutathione Sulfinic Acid (Gso2h)
And Acetate
pdb|4ID0|B Chain B, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound Glutathione Sulfinic Acid (Gso2h)
And Acetate
pdb|4IJI|A Chain A, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|B Chain B, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|C Chain C, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|D Chain D, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|E Chain E, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|F Chain F, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|G Chain G, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
pdb|4IJI|H Chain H, Crystal Structure Of A Glutathione Transferase Family
Member From Psuedomonas Fluorescens Pf-5, Target
Efi-900011, With Bound S- (propanoic Acid)-glutathione
Length = 214
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 47/109 (43%), Gaps = 21/109 (19%)
Query: 88 VVLYQYEACPFCNKVKAFL----DYYDIPYKVVEVNPINKKEI--KWSEYKKVPILMVD- 140
+ L+ A P+ KV L + + +++P+ + + K+P L +D
Sbjct: 3 LTLFHNPASPYVRKVXVLLHETGQLNRVALQASQLSPVAPDAALNQDNPLGKIPALRLDN 62
Query: 141 GEQLVDSSAIIDQLDQK-----LTPKRKADSPSGDDEEKKWRGYDLSSI 184
G+ L DS I+D LDQ+ L P+ D +WR L+++
Sbjct: 63 GQVLYDSRVILDYLDQQHVGNPLIPR---------DGSARWRRLTLAAL 102
>pdb|4HI7|A Chain A, Crystal Structure Of Glutathione Transferase Homolog From
Drosophilia Mojavensis, Target Efi-501819, With Bound
Glutathione
pdb|4HI7|B Chain B, Crystal Structure Of Glutathione Transferase Homolog From
Drosophilia Mojavensis, Target Efi-501819, With Bound
Glutathione
Length = 228
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 37/84 (44%), Gaps = 11/84 (13%)
Query: 89 VLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKE-----IKWSEYKKVPILMVDGEQ 143
+LY +A P VK L +PY VN +NK++ +K + VP+L
Sbjct: 5 ILYGIDASPPVRAVKLTLAALQLPYDYKIVNLMNKEQHSEEYLKKNPQHTVPLLEDGDAN 64
Query: 144 LVDSSAIIDQL------DQKLTPK 161
+ DS AI+ L D L PK
Sbjct: 65 IADSHAIMAYLVSKYGKDDSLYPK 88
>pdb|4FIW|A Chain A, X-ray Crystal Structure Of Corynebacterium Glutamicum
Nrdh-redoxin At 1.5a
Length = 77
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/56 (25%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Query: 88 VVLYQYEACPFCNKVKAFLDYYDIPYKVVEV--NPINKKEIKWSEYKKVPILMVDG 141
+ +Y AC CN K LD + Y +V++ + ++ + Y + P+++ DG
Sbjct: 3 ITVYTKPACVQCNATKKALDRAGLEYDLVDISLDEEAREYVLALGYLQAPVVVADG 58
>pdb|2WS2|A Chain A, The 2 Angstrom Structure Of A Nu-Class Gst From Haemonchus
Contortus
pdb|2WS2|B Chain B, The 2 Angstrom Structure Of A Nu-Class Gst From Haemonchus
Contortus
Length = 204
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 12/28 (42%), Positives = 19/28 (67%)
Query: 131 YKKVPILMVDGEQLVDSSAIIDQLDQKL 158
+ ++P+L VDG+QL S AI+ L +K
Sbjct: 48 FGQLPVLEVDGKQLPQSVAIVRYLARKF 75
>pdb|3KXO|A Chain A, An Orally Active Inhibitor Bound At The Active Site Of
Hpgds
pdb|3KXO|B Chain B, An Orally Active Inhibitor Bound At The Active Site Of
Hpgds
Length = 202
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 21 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 70
>pdb|4EE0|A Chain A, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EE0|B Chain B, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EDY|A Chain A, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EDY|B Chain B, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
Length = 199
Score = 27.3 bits (59), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 18 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 67
>pdb|4EC0|A Chain A, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EC0|B Chain B, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
Length = 200
Score = 27.3 bits (59), Expect = 6.2, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 19 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 68
>pdb|2VCQ|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCQ|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCQ|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCQ|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCW|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCW|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCW|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCW|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCX|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 2.1a.
pdb|2VCX|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 2.1a.
pdb|2VCX|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 2.1a.
pdb|2VCX|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 2.1a.
pdb|2VCZ|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCZ|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCZ|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VCZ|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 1.95a.
pdb|2VD0|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 2.2a.
pdb|2VD0|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 2.2a.
pdb|2VD0|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 2.2a.
pdb|2VD0|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 2.2a.
pdb|2VD1|A Chain A, Complex Structure Of Prostaglandin D2 Synthase At 2.25a.
pdb|2VD1|B Chain B, Complex Structure Of Prostaglandin D2 Synthase At 2.25a.
pdb|2VD1|C Chain C, Complex Structure Of Prostaglandin D2 Synthase At 2.25a.
pdb|2VD1|D Chain D, Complex Structure Of Prostaglandin D2 Synthase At 2.25a
Length = 199
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 18 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 67
>pdb|3EE2|A Chain A, Structure Of Human Prostaglandin D-Synthase (Hgsts1-1) In
Complex With Nocodazole
pdb|3EE2|B Chain B, Structure Of Human Prostaglandin D-Synthase (Hgsts1-1) In
Complex With Nocodazole
Length = 199
Score = 27.3 bits (59), Expect = 6.4, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 18 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 67
>pdb|4EDZ|A Chain A, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EDZ|B Chain B, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EDZ|C Chain C, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
pdb|4EDZ|D Chain D, Crystal Structure Of Hh-Pgds With Water Displacing
Inhibitor
Length = 199
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 18 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 67
>pdb|1IYH|A Chain A, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYH|B Chain B, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYH|C Chain C, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYH|D Chain D, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYI|A Chain A, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYI|B Chain B, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYI|C Chain C, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1IYI|D Chain D, Crystal Structure Of Hematopoietic Prostaglandin D
Synthase
pdb|1V40|A Chain A, First Inhibitor Complex Structure Of Human Hematopoietic
Prostaglandin D Synthase
pdb|1V40|B Chain B, First Inhibitor Complex Structure Of Human Hematopoietic
Prostaglandin D Synthase
pdb|1V40|C Chain C, First Inhibitor Complex Structure Of Human Hematopoietic
Prostaglandin D Synthase
pdb|1V40|D Chain D, First Inhibitor Complex Structure Of Human Hematopoietic
Prostaglandin D Synthase
pdb|2CVD|A Chain A, Crystal Structure Analysis Of Human Hematopoietic
Prostaglandin D Synthase Complexed With Hql-79
pdb|2CVD|B Chain B, Crystal Structure Analysis Of Human Hematopoietic
Prostaglandin D Synthase Complexed With Hql-79
pdb|2CVD|C Chain C, Crystal Structure Analysis Of Human Hematopoietic
Prostaglandin D Synthase Complexed With Hql-79
pdb|2CVD|D Chain D, Crystal Structure Analysis Of Human Hematopoietic
Prostaglandin D Synthase Complexed With Hql-79
pdb|3VI5|A Chain A, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI5|B Chain B, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI5|C Chain C, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI5|D Chain D, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI7|A Chain A, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI7|B Chain B, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI7|C Chain C, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
pdb|3VI7|D Chain D, Human Hematopoietic Prostaglandin D Synthase Inhibitor
Complex Structures
Length = 198
Score = 27.3 bits (59), Expect = 6.6, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 26/50 (52%), Gaps = 1/50 (2%)
Query: 102 VKAFLDYYDIPYKVVEVNPINKKEIKWS-EYKKVPILMVDGEQLVDSSAI 150
++ Y DI Y+ + + EIK + + K+PIL VDG L S AI
Sbjct: 17 IRYIFAYLDIQYEDHRIEQADWPEIKSTLPFGKIPILEVDGLTLHQSLAI 66
>pdb|3IC4|A Chain A, The Crystal Structure Of The Glutaredoxin(Grx-1) From
Archaeoglobus Fulgidus
Length = 92
Score = 27.3 bits (59), Expect = 6.7, Method: Compositional matrix adjust.
Identities = 11/41 (26%), Positives = 21/41 (51%)
Query: 87 EVVLYQYEACPFCNKVKAFLDYYDIPYKVVEVNPINKKEIK 127
EV+ Y CP C + FL + ++V+ ++ + +E K
Sbjct: 13 EVLXYGLSTCPHCKRTLEFLKREGVDFEVIWIDKLEGEERK 53
>pdb|2ON5|A Chain A, Structure Of Nagst-2
pdb|2ON5|B Chain B, Structure Of Nagst-2
pdb|2ON5|C Chain C, Structure Of Nagst-2
pdb|2ON5|D Chain D, Structure Of Nagst-2
pdb|2ON5|E Chain E, Structure Of Nagst-2
pdb|2ON5|F Chain F, Structure Of Nagst-2
pdb|2ON5|G Chain G, Structure Of Nagst-2
pdb|2ON5|H Chain H, Structure Of Nagst-2
Length = 206
Score = 26.9 bits (58), Expect = 8.2, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 27/51 (52%), Gaps = 4/51 (7%)
Query: 108 YYDIPYKVVEVNPINKKEIKWSEYKKVPILMVDGEQLVDSSAIIDQLDQKL 158
Y D+ Y E P +K E+ + + +P+L DG+QL S AI L +K
Sbjct: 29 YEDVRYTFQEW-PKHKDEMPFGQ---IPVLEEDGKQLAQSFAIARYLSRKF 75
>pdb|3LXT|A Chain A, Crystal Structure Of Glutathione S Transferase From
Pseudomonas Fluorescens
pdb|3LXT|B Chain B, Crystal Structure Of Glutathione S Transferase From
Pseudomonas Fluorescens
pdb|3LXT|C Chain C, Crystal Structure Of Glutathione S Transferase From
Pseudomonas Fluorescens
pdb|3LXT|D Chain D, Crystal Structure Of Glutathione S Transferase From
Pseudomonas Fluorescens
pdb|3M0F|A Chain A, Crystal Structure Of Glutathione S Transferase In Complex
With Glutathione From Pseudomonas Fluorescens
pdb|3M0F|B Chain B, Crystal Structure Of Glutathione S Transferase In Complex
With Glutathione From Pseudomonas Fluorescens
Length = 213
Score = 26.9 bits (58), Expect = 9.0, Method: Compositional matrix adjust.
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 1/31 (3%)
Query: 133 KVPILMVDG-EQLVDSSAIIDQLDQKLTPKR 162
K P L+ +G E L+DSS IID L+ P+R
Sbjct: 50 KAPTLVCEGGEVLMDSSLIIDYLETLAGPQR 80
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.134 0.417
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,524,186
Number of Sequences: 62578
Number of extensions: 209363
Number of successful extensions: 411
Number of sequences better than 100.0: 56
Number of HSP's better than 100.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 34
Number of HSP's that attempted gapping in prelim test: 387
Number of HSP's gapped (non-prelim): 56
length of query: 212
length of database: 14,973,337
effective HSP length: 95
effective length of query: 117
effective length of database: 9,028,427
effective search space: 1056325959
effective search space used: 1056325959
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 49 (23.5 bits)