Query 028233
Match_columns 211
No_of_seqs 123 out of 346
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 13:29:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028233.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028233hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fd5a1 a.4.1.9 (A:1-76) Proba 76.6 0.4 2.9E-05 31.3 1.2 37 104-151 40-76 (76)
2 d1pb6a1 a.4.1.9 (A:14-85) Hypo 74.8 0.55 4E-05 30.6 1.5 35 104-149 37-71 (72)
3 d2np5a1 a.4.1.9 (A:9-77) Trans 66.6 1.2 8.6E-05 28.4 1.7 35 104-149 34-68 (69)
4 d1pk6c_ b.22.1.1 (C:) Compleme 62.1 1.1 7.7E-05 32.0 0.8 23 67-89 26-48 (129)
5 d2g7sa1 a.4.1.9 (A:3-76) Putat 60.6 1.2 8.9E-05 28.8 0.8 36 104-150 37-72 (74)
6 d2oi8a1 a.4.1.9 (A:8-86) Putat 57.7 1.5 0.00011 28.7 0.9 32 104-146 42-73 (79)
7 d1pk6b_ b.22.1.1 (B:) Compleme 55.3 1.6 0.00012 30.7 0.8 23 67-89 26-48 (132)
8 d1pk6a_ b.22.1.1 (A:) Compleme 55.0 1.7 0.00012 30.6 0.8 23 67-89 24-46 (133)
9 d1o91a_ b.22.1.1 (A:) Collagen 51.9 2 0.00014 30.5 0.8 23 67-89 24-46 (131)
10 d2iw5b1 a.4.1.3 (B:376-440) RE 51.3 2.2 0.00016 27.3 0.9 28 173-206 1-28 (65)
11 d1v7ba1 a.4.1.9 (A:1-74) Trans 49.6 3.9 0.00028 26.1 1.9 36 104-150 37-72 (74)
12 d1vi0a1 a.4.1.9 (A:6-77) Hypot 48.7 3.6 0.00026 26.1 1.6 32 104-146 34-65 (72)
13 d1gr3a_ b.22.1.1 (A:) Collagen 46.2 2.8 0.0002 29.5 0.8 23 67-89 25-47 (132)
14 d1t33a1 a.4.1.9 (A:1-88) Putat 45.5 5.5 0.0004 26.2 2.3 12 104-115 44-55 (88)
15 d2id6a1 a.4.1.9 (A:1-75) Trans 44.8 6.3 0.00046 25.1 2.5 12 104-115 36-47 (75)
16 d1c3ha_ b.22.1.1 (A:) 30 kDa a 43.5 3.2 0.00023 29.7 0.8 23 67-89 27-49 (137)
17 d2gfna1 a.4.1.9 (A:4-80) Proba 41.9 5.8 0.00042 25.4 1.9 33 104-147 39-71 (77)
18 d2o7ta1 a.4.1.9 (A:1-78) Trans 41.4 3.8 0.00028 26.6 0.9 31 104-145 40-70 (78)
19 d1wpna_ c.107.1.1 (A:) Mangane 40.5 11 0.00081 27.6 3.6 52 82-138 93-146 (187)
20 d1sgma1 a.4.1.9 (A:5-77) Putat 39.6 11 0.00082 23.6 3.1 14 104-117 35-50 (73)
21 d2fbqa1 a.4.1.9 (A:2-80) Trans 39.3 6.5 0.00048 25.2 1.8 32 104-146 37-68 (79)
22 d2d6ya1 a.4.1.9 (A:7-74) Putat 38.9 7.5 0.00054 24.5 2.0 12 104-115 35-46 (68)
23 d1t56a1 a.4.1.9 (A:22-94) Ethr 34.2 8.2 0.0006 24.2 1.6 12 104-115 36-47 (73)
24 d2hyja1 a.4.1.9 (A:8-82) Putat 34.0 5.4 0.00039 25.6 0.7 31 104-145 38-68 (75)
25 d2gena1 a.4.1.9 (A:6-75) Proba 31.5 10 0.00076 23.5 1.8 32 104-146 33-64 (70)
26 d1rkta1 a.4.1.9 (A:2-82) Hypot 29.8 7.2 0.00052 25.2 0.7 33 104-147 44-76 (81)
27 d2hkua1 a.4.1.9 (A:18-87) Puta 28.6 16 0.0012 22.9 2.4 12 104-115 33-44 (70)
28 d3c07a1 a.4.1.9 (A:15-89) Puta 27.9 11 0.00083 23.6 1.5 32 104-146 38-69 (75)
29 d1bdya_ b.7.1.1 (A:) Domain fr 27.4 9.1 0.00066 26.8 1.0 9 174-182 49-57 (123)
30 d1jt6a1 a.4.1.9 (A:2-72) Multi 26.3 18 0.0013 22.5 2.3 12 104-115 34-45 (71)
31 d1z0xa1 a.4.1.9 (A:4-71) Trans 25.5 3.4 0.00025 26.3 -1.6 12 104-115 36-47 (68)
32 d2g3ba1 a.4.1.9 (A:2-73) Putat 22.0 23 0.0017 22.0 2.2 12 104-115 35-46 (72)
33 d2zkmx2 b.7.1.1 (X:678-799) Ph 21.6 13 0.00092 26.0 0.8 9 175-183 47-55 (122)
34 d2id3a1 a.4.1.9 (A:13-80) Puta 20.8 15 0.0011 22.9 0.9 12 104-115 39-50 (68)
No 1
>d2fd5a1 a.4.1.9 (A:1-76) Probable transcriptional regulator PA3133 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=76.62 E-value=0.4 Score=31.34 Aligned_cols=37 Identities=22% Similarity=0.355 Sum_probs=27.5
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhccC
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDNG 151 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiDNG 151 (211)
|-|.+|+||+.. ++.+..+++.++..+.+.++.+|.|
T Consensus 40 s~~t~Y~~F~~K-----------e~L~~~~~~~~~~~~~~~l~~~~pG 76 (76)
T d2fd5a1 40 TVGGFYAHFQSK-----------DALMLEAFEQLLGKRRELLGELDPG 76 (76)
T ss_dssp CGGGGGGTCSCH-----------HHHHHHHHHHHHHHHHHHHHTSCTT
T ss_pred CccchhhcCCCH-----------HHHHHHHHHHHHHHHHHHHHcCCCC
Confidence 457889998754 2345667788888888888888876
No 2
>d1pb6a1 a.4.1.9 (A:14-85) Hypothetical transcriptional regulator YcdC {Escherichia coli [TaxId: 562]}
Probab=74.79 E-value=0.55 Score=30.57 Aligned_cols=35 Identities=9% Similarity=0.097 Sum_probs=25.6
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhc
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAID 149 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiD 149 (211)
|.|.+|+||+.. ++.+..++....+.+++.+.+++
T Consensus 37 s~~t~y~~F~~K-----------~~l~~~~~~~~~~~~~~~l~a~~ 71 (72)
T d1pb6a1 37 SKTNLLYYFPSK-----------EALYIAVLRQILDIWLAPLKAFR 71 (72)
T ss_dssp CHHHHHHHSSSH-----------HHHHHHHHHHHHHHHTHHHHHCC
T ss_pred ChHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHHHhc
Confidence 678999999754 23456677778888888887754
No 3
>d2np5a1 a.4.1.9 (A:9-77) Transcriptional regulator RHA1_ro04179 {Rhodococcus sp. [TaxId: 1831]}
Probab=66.64 E-value=1.2 Score=28.36 Aligned_cols=35 Identities=14% Similarity=0.300 Sum_probs=24.8
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhc
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAID 149 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiD 149 (211)
|-|.||+||+.. ++.+..++....+.+.+.+++++
T Consensus 34 s~~~iy~~F~sK-----------~~L~~~~~~~~~~~~~~~~~~~~ 68 (69)
T d2np5a1 34 SIGAVQHHFSTK-----------DEMFAFALRTLVDKLLARLSEVE 68 (69)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHHHTSC
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHHHcc
Confidence 457899998754 23456667778888888887764
No 4
>d1pk6c_ b.22.1.1 (C:) Complement c1q globular head, C chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=62.10 E-value=1.1 Score=31.98 Aligned_cols=23 Identities=22% Similarity=0.362 Sum_probs=19.7
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+++|+|+.||++++||==...|
T Consensus 26 ~~~~N~G~~yd~stg~FTaPv~G 48 (129)
T d1pk6c_ 26 AVLTNPQGDYDTSTGKFTCKVPG 48 (129)
T ss_dssp EEEECTTCCEETTTTEEECSSCE
T ss_pred eEEECCCCCccCCCCEEECCcCC
Confidence 47899999999999998776665
No 5
>d2g7sa1 a.4.1.9 (A:3-76) Putative transcriptional regulator Atu0279 {Agrobacterium tumefaciens [TaxId: 358]}
Probab=60.57 E-value=1.2 Score=28.81 Aligned_cols=36 Identities=14% Similarity=0.182 Sum_probs=24.0
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhcc
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDN 150 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiDN 150 (211)
|-|.+|+||+.. ++.+..+...+.+.+.+.+..+++
T Consensus 37 s~~~iY~~F~sK-----------~~L~~~~~~~~~~~~~~~~~~i~~ 72 (74)
T d2g7sa1 37 RNASIHHHFPSK-----------SDLVCKLVSQYRQEAEAGIAELEK 72 (74)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CcchHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHHHHHh
Confidence 567899998855 123455566677777777776654
No 6
>d2oi8a1 a.4.1.9 (A:8-86) Putative regulatory protein Sco4313 {Streptomyces coelicolor [TaxId: 1902]}
Probab=57.68 E-value=1.5 Score=28.68 Aligned_cols=32 Identities=16% Similarity=0.340 Sum_probs=21.7
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAID 146 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~ID 146 (211)
|-|.+|+||+.. ++.+..++..+++.+.+.++
T Consensus 42 s~~~~Y~~F~~k-----------~~L~~~~~~~~~~~~~~~~~ 73 (79)
T d2oi8a1 42 SGPALYRYFDGR-----------DELITELIRDAYRSQADSLR 73 (79)
T ss_dssp CHHHHHTTCSSH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred CCCchhhhcCCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 457889888754 23456667777777777774
No 7
>d1pk6b_ b.22.1.1 (B:) Complement c1q globular head, B chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=55.32 E-value=1.6 Score=30.73 Aligned_cols=23 Identities=13% Similarity=0.432 Sum_probs=19.3
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+++|+|+.||++++||-=--.|
T Consensus 26 ~~~~n~g~~ydtstg~FTaPv~G 48 (132)
T d1pk6b_ 26 HVITNMNNNYEPRSGKFTCKVPG 48 (132)
T ss_dssp EEEEEETSCEETTTTEEECSSCE
T ss_pred EEEECCCCcccCCCCeEEcccCc
Confidence 48999999999999998766544
No 8
>d1pk6a_ b.22.1.1 (A:) Complement c1q globular head, A chain {Human (Homo sapiens) [TaxId: 9606]}
Probab=54.97 E-value=1.7 Score=30.59 Aligned_cols=23 Identities=9% Similarity=0.157 Sum_probs=18.8
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+++|+||-||++++||-=--.|
T Consensus 24 ~~~~n~g~~yntStg~FTaPv~G 46 (133)
T d1pk6a_ 24 TVITNQEEPYQNHSGRFVCTVPG 46 (133)
T ss_dssp EEEEEETCCEETTTTEEECCSCE
T ss_pred eEEECCCCCCcCCCCEEEeeEcc
Confidence 37899999999999998755544
No 9
>d1o91a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Mouse (Mus musculus), isoform VIII [TaxId: 10090]}
Probab=51.91 E-value=2 Score=30.51 Aligned_cols=23 Identities=13% Similarity=0.317 Sum_probs=19.7
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+.+|+|+.||++++||-=-..|
T Consensus 24 ~~~~N~g~~yntstg~FTaPvaG 46 (131)
T d1o91a_ 24 KLLYNGRQNYNPQTGIFTCEVPG 46 (131)
T ss_dssp EEEEEETTCEETTTTEEECCSCE
T ss_pred eEEECCCCCeeCCCCEEEcccce
Confidence 47899999999999999776655
No 10
>d2iw5b1 a.4.1.3 (B:376-440) REST corepressor 1, CoREST {Human (Homo sapiens) [TaxId: 9606]}
Probab=51.33 E-value=2.2 Score=27.33 Aligned_cols=28 Identities=29% Similarity=0.455 Sum_probs=22.2
Q ss_pred hcccCCCCCCCCCChHHHHHHHHHHHHHHHHHHh
Q 028233 173 VGKLNLDWTEPDQSAERENEAFQQGMDLAGKEFL 206 (211)
Q Consensus 173 V~~lNP~W~~~~~~~~~~d~~F~~A~~~~~~ef~ 206 (211)
|.+.|+.|.+ ++++.|.+|+..-|..|.
T Consensus 1 ~~k~~~~WT~------eE~~~f~~~~~~~G~~w~ 28 (65)
T d2iw5b1 1 IQKCNARWTT------EEQLLAVQAIRKYGRDFQ 28 (65)
T ss_dssp CCCCCSSCCH------HHHHHHHHHHHHHSSCHH
T ss_pred CCCCCCCCCH------HHHHHHHHHHHHhCchHH
Confidence 4568899965 679999999998886654
No 11
>d1v7ba1 a.4.1.9 (A:1-74) Transcriptional regulator Cgl2612 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=49.58 E-value=3.9 Score=26.13 Aligned_cols=36 Identities=14% Similarity=0.180 Sum_probs=22.7
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhhhcc
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDAIDN 150 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDaiDN 150 (211)
|-|.+|.||+.. ++.+..+.+.+.+.+.+.+..+.+
T Consensus 37 s~~t~Y~~F~~K-----------~~L~~~~~~~~~~~~~~~l~~~~~ 72 (74)
T d1v7ba1 37 SKSGLIYHFPSR-----------HALLLGMHELLADDWDKELRDITR 72 (74)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHHHHHCS
T ss_pred CcchHhhhCCCH-----------HHHHHHHHHHHHHHHHHHHHHHhC
Confidence 567899999855 123455566666666666655543
No 12
>d1vi0a1 a.4.1.9 (A:6-77) Hypothetical transcriptional regulator YsiA {Bacillus subtilis [TaxId: 1423]}
Probab=48.70 E-value=3.6 Score=26.11 Aligned_cols=32 Identities=22% Similarity=0.420 Sum_probs=20.5
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAID 146 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~ID 146 (211)
|-|.+|+||+.. ++.+..+....+..+.+.++
T Consensus 34 s~~~~y~~F~~K-----------~~L~~~~~~~~~~~~~~~~~ 65 (72)
T d1vi0a1 34 ADGTIYLYFKNK-----------EDILISLFKEKMGQFIERME 65 (72)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 567899999854 12345556666666666654
No 13
>d1gr3a_ b.22.1.1 (A:) Collagen NC1 trimerisation domain {Human (Homo sapiens), isoform X [TaxId: 9606]}
Probab=46.16 E-value=2.8 Score=29.52 Aligned_cols=23 Identities=17% Similarity=0.381 Sum_probs=18.2
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+.+|+|+-||++++||-=--.|
T Consensus 25 ~~~~n~G~~yntstg~FTaPv~G 47 (132)
T d1gr3a_ 25 KILYNRQQHYDPRTGIFTCQIPG 47 (132)
T ss_dssp EEEECTTCCEETTTTEEECSSCE
T ss_pred eEEECCCCCeeCCCCEEEeeEcc
Confidence 37889999999999988654443
No 14
>d1t33a1 a.4.1.9 (A:1-88) Putative transcriptional repressor YbiH {Salmonella typhimurium [TaxId: 90371]}
Probab=45.47 E-value=5.5 Score=26.24 Aligned_cols=12 Identities=17% Similarity=0.313 Sum_probs=9.7
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|.+|+||+..
T Consensus 44 s~~~~Y~~F~sK 55 (88)
T d1t33a1 44 NIAAITYYFGSK 55 (88)
T ss_dssp CHHHHHHHHSSH
T ss_pred ChhhhhccCCCH
Confidence 568999999843
No 15
>d2id6a1 a.4.1.9 (A:1-75) Transcriptional regulator TM1030 {Thermotoga maritima [TaxId: 2336]}
Probab=44.80 E-value=6.3 Score=25.14 Aligned_cols=12 Identities=25% Similarity=0.717 Sum_probs=9.7
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|-||.||+..
T Consensus 36 s~~~iY~~F~~k 47 (75)
T d2id6a1 36 AKGLIFHYFKNK 47 (75)
T ss_dssp CTHHHHHHHSSH
T ss_pred CHHHHHHHCCCH
Confidence 568899999865
No 16
>d1c3ha_ b.22.1.1 (A:) 30 kDa adipocyte complement-related protein {Mouse (Mus musculus) [TaxId: 10090]}
Probab=43.47 E-value=3.2 Score=29.75 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=18.7
Q ss_pred cEEEecCCcccCCCCCCCCCCCC
Q 028233 67 DAVLDVGGVYDPSNDCYDHHQKG 89 (211)
Q Consensus 67 DiVvDVGg~YDp~~~rfDHHQr~ 89 (211)
.+.+|+|+-||++++||==-..|
T Consensus 27 ~~~~N~G~~yntStg~FTaPv~G 49 (137)
T d1c3ha_ 27 KIFYNQQNHYDGSTGKFYCNIPG 49 (137)
T ss_dssp EEEECTTCCEETTTTEEECCSCE
T ss_pred eEEECCCCcccCCCCEEEeCcCC
Confidence 37899999999999988655544
No 17
>d2gfna1 a.4.1.9 (A:4-80) Probable transcriptional regulator RHA1_ro04631 {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=41.91 E-value=5.8 Score=25.40 Aligned_cols=33 Identities=15% Similarity=0.126 Sum_probs=19.8
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDA 147 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDa 147 (211)
|-|.+|+||+.. ++.+..++..+.+.+.+.++.
T Consensus 39 s~~~lY~~F~~K-----------~~L~~~~~~~~~~~~~~~~~~ 71 (77)
T d2gfna1 39 STGVLNHYFGSR-----------HELLLAALRRAGDIQGDRYRT 71 (77)
T ss_dssp CHHHHHHHTSSH-----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 567899998755 123444555555555555544
No 18
>d2o7ta1 a.4.1.9 (A:1-78) Transcriptional regulator Cgl1640/Cg1846 {Corynebacterium glutamicum [TaxId: 1718]}
Probab=41.40 E-value=3.8 Score=26.60 Aligned_cols=31 Identities=6% Similarity=0.091 Sum_probs=18.7
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAI 145 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~I 145 (211)
|-|.+|+||+.. ++.+..+++.+++.+++.+
T Consensus 40 s~~t~y~~F~sK-----------e~L~~~~~~~~~~~~~~~~ 70 (78)
T d2o7ta1 40 GVATLYRNFPDR-----------FTLDMACAQYLFNVVISLQ 70 (78)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHH
Confidence 568999999865 1223445555555555544
No 19
>d1wpna_ c.107.1.1 (A:) Manganese-dependent inorganic pyrophosphatase (family II) {Bacillus subtilis [TaxId: 1423]}
Probab=40.50 E-value=11 Score=27.57 Aligned_cols=52 Identities=17% Similarity=0.089 Sum_probs=28.1
Q ss_pred CCCCCCCCccccccCC--CcccccchhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHH
Q 028233 82 CYDHHQKGFEEVFGHG--FSTKLSSAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVY 138 (211)
Q Consensus 82 rfDHHQr~F~~t~~~~--~~~klSSAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy 138 (211)
.+|||..+=...+... ...+.||+..|...+-++ ++.+++.+....||.-|+
T Consensus 93 vIDHH~~~~~~~~~~~~~~~~~~sst~~iv~~l~~~-----~~~~i~~~~A~~L~~gI~ 146 (187)
T d1wpna_ 93 VIDHHRIANFETAEPLYYRAEPVGCTATILNKMYKE-----NNVKIEKEIAGLMLSAII 146 (187)
T ss_dssp EEECSCCCSCCCSSCCEEEECSSSCHHHHHHHHHHH-----TTCCCCHHHHHHHHHHHH
T ss_pred EEecccccccCcccceeeecCccccHHHHHHHHHHH-----hCCCCCHHHHHHHHHHHH
Confidence 3899964311111111 123467777666554332 566667666667666665
No 20
>d1sgma1 a.4.1.9 (A:5-77) Putative transcriptional regulator YxaF {Bacillus subtilis [TaxId: 1423]}
Probab=39.63 E-value=11 Score=23.64 Aligned_cols=14 Identities=36% Similarity=0.686 Sum_probs=10.7
Q ss_pred chhhhHHHH-H-HHHH
Q 028233 104 SAGLVYKHF-G-KELI 117 (211)
Q Consensus 104 SAGLIykhf-G-~eii 117 (211)
|-|.+|+|| + |+-|
T Consensus 35 s~~~iy~~F~~~Ke~L 50 (73)
T d1sgma1 35 PKGSLYHFFPNGKEEL 50 (73)
T ss_dssp CSCHHHHSTTTCHHHH
T ss_pred CHHHHHHHcCCCHHHH
Confidence 567899999 7 6644
No 21
>d2fbqa1 a.4.1.9 (A:2-80) Transcriptional regulator PsrA {Pseudomonas aeruginosa [TaxId: 287]}
Probab=39.26 E-value=6.5 Score=25.20 Aligned_cols=32 Identities=19% Similarity=0.390 Sum_probs=20.2
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAID 146 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~ID 146 (211)
|-|.+|+||+.. ++.+..++..++..++..++
T Consensus 37 s~~s~y~~F~~K-----------~~l~~~~~~~~~~~~~~~~~ 68 (79)
T d2fbqa1 37 NLAAVNYHFGSK-----------KALIQAVFSRFLGPFCASLE 68 (79)
T ss_dssp CHHHHHHHTCSH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred ChhHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 457899999865 12345556666666666654
No 22
>d2d6ya1 a.4.1.9 (A:7-74) Putative regulator SCO4008 {Streptomyces coelicolor [TaxId: 1902]}
Probab=38.91 E-value=7.5 Score=24.52 Aligned_cols=12 Identities=25% Similarity=0.708 Sum_probs=9.8
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|.+|+|||..
T Consensus 35 s~~~~Y~~F~~K 46 (68)
T d2d6ya1 35 NKQLIYAYYGNK 46 (68)
T ss_dssp CHHHHHHHHSSH
T ss_pred chhHHHHHCcCH
Confidence 568999999865
No 23
>d1t56a1 a.4.1.9 (A:22-94) Ethr repressor {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=34.20 E-value=8.2 Score=24.23 Aligned_cols=12 Identities=25% Similarity=0.218 Sum_probs=9.4
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|-+|+||+..
T Consensus 36 s~~t~Y~~F~~K 47 (73)
T d1t56a1 36 SRPTFYFYFPSK 47 (73)
T ss_dssp CHHHHHHHCSSH
T ss_pred CHHHHHHHCcCH
Confidence 567899999854
No 24
>d2hyja1 a.4.1.9 (A:8-82) Putative transcriptional regulator SCO4940 {Streptomyces coelicolor [TaxId: 1902]}
Probab=34.04 E-value=5.4 Score=25.58 Aligned_cols=31 Identities=23% Similarity=0.288 Sum_probs=19.1
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAI 145 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~I 145 (211)
|-|.+|.|||.. ++.+..+++...+.|.+.|
T Consensus 38 s~~~~Y~~F~~K-----------~~L~~~~~~~~~~~~~~~v 68 (75)
T d2hyja1 38 SKSGVHKHFGTK-----------ETLQISTLDKAFVDFWHRV 68 (75)
T ss_dssp CHHHHHTTCSSH-----------HHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHH
Confidence 568899998754 1234555556666655544
No 25
>d2gena1 a.4.1.9 (A:6-75) Probable transcriptional regulator PA1836 {Pseudomonas aeruginosa [TaxId: 287]}
Probab=31.53 E-value=10 Score=23.55 Aligned_cols=32 Identities=28% Similarity=0.524 Sum_probs=19.5
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAID 146 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~ID 146 (211)
|-|-+|+||+.. ++.+..+++...+.+.+.++
T Consensus 33 s~~t~Y~~F~sK-----------~~L~~~~~~~~~~~~~~~l~ 64 (70)
T d2gena1 33 SIGSLYHHFGNK-----------ERIHGELYLAGIGQYAALLE 64 (70)
T ss_dssp CHHHHHHHTCSH-----------HHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCCCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 457899998764 12345555556666655554
No 26
>d1rkta1 a.4.1.9 (A:2-82) Hypothetical transcriptional regulator YfiR {Bacillus subtilis [TaxId: 1423]}
Probab=29.79 E-value=7.2 Score=25.18 Aligned_cols=33 Identities=21% Similarity=0.252 Sum_probs=18.6
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAIDA 147 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~IDa 147 (211)
|-|.+|+||+.. ++.+..+.+.....+++.++.
T Consensus 44 s~~t~Y~~F~~K-----------~~L~~~~~~~~~~~~~~~l~~ 76 (81)
T d1rkta1 44 SRGGVYLYFSST-----------EEMFRRIIETGLDEGLRKLDK 76 (81)
T ss_dssp CHHHHHTTCSCH-----------HHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHHH
Confidence 457788888754 123344455555555555543
No 27
>d2hkua1 a.4.1.9 (A:18-87) Putative transcriptional regulator RHA1_ro03468 {Rhodococcus sp. RHA1 [TaxId: 101510]}
Probab=28.59 E-value=16 Score=22.95 Aligned_cols=12 Identities=17% Similarity=0.254 Sum_probs=9.8
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|.|.+|.||+..
T Consensus 33 s~~~~Y~~F~~K 44 (70)
T d2hkua1 33 HPNQVTYYYGSK 44 (70)
T ss_dssp CHHHHHHHHSSH
T ss_pred ChhhHHhcCCCH
Confidence 568999999855
No 28
>d3c07a1 a.4.1.9 (A:15-89) Putative transcriptional regulator SCO4850 {Streptomyces coelicolor [TaxId: 1902]}
Probab=27.85 E-value=11 Score=23.57 Aligned_cols=32 Identities=16% Similarity=0.241 Sum_probs=18.6
Q ss_pred chhhhHHHHHHHHHHHHhCCCCCChhHHHHHHHHHHHHHhhhh
Q 028233 104 SAGLVYKHFGKELIAKELNVDEGHPDVHRLFLAVYKNFMEAID 146 (211)
Q Consensus 104 SAGLIykhfG~eii~~~l~~~~~~~~~~~l~~kvy~~fie~ID 146 (211)
|-|.+|+||+.. ++.+..+++.+...+.+.+.
T Consensus 38 s~~~~y~~F~~k-----------~~L~~~~~~~~~~~~~~~~~ 69 (75)
T d3c07a1 38 SVGNAYYYFAGK-----------EHLIQGFYDRIAAEHRAAVR 69 (75)
T ss_dssp CHHHHHHHCSSH-----------HHHHHHHHHHHHHHHHHHTT
T ss_pred CHHHHHHHCcCH-----------HHHHHHHHHHHHHHHHHHHH
Confidence 557899998754 12234455555555555443
No 29
>d1bdya_ b.7.1.1 (A:) Domain from protein kinase C delta {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=27.45 E-value=9.1 Score=26.81 Aligned_cols=9 Identities=11% Similarity=0.549 Sum_probs=7.9
Q ss_pred cccCCCCCC
Q 028233 174 GKLNLDWTE 182 (211)
Q Consensus 174 ~~lNP~W~~ 182 (211)
..+||.|||
T Consensus 49 kT~nP~WnE 57 (123)
T d1bdya_ 49 PTMYPEWKS 57 (123)
T ss_dssp CCBCCCTTC
T ss_pred CCCCcccce
Confidence 578999998
No 30
>d1jt6a1 a.4.1.9 (A:2-72) Multidrug binding protein QacR {Staphylococcus aureus [TaxId: 1280]}
Probab=26.25 E-value=18 Score=22.52 Aligned_cols=12 Identities=42% Similarity=0.725 Sum_probs=9.8
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|.+|.||+..
T Consensus 34 s~~~~y~~F~~K 45 (71)
T d1jt6a1 34 SKGNLYYHFKTK 45 (71)
T ss_dssp CHHHHHHHHSSH
T ss_pred CHhHHHHHCcCH
Confidence 568999999864
No 31
>d1z0xa1 a.4.1.9 (A:4-71) Transcriptional regulator EF0787 {Enterococcus faecalis [TaxId: 1351]}
Probab=25.52 E-value=3.4 Score=26.31 Aligned_cols=12 Identities=25% Similarity=0.360 Sum_probs=9.1
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|.||+||+..
T Consensus 36 s~~~iy~hF~~K 47 (68)
T d1z0xa1 36 QAPAIYWYFKNK 47 (68)
T ss_dssp CHHHHHTTCSSH
T ss_pred chhHHHHhcCCH
Confidence 467899998754
No 32
>d2g3ba1 a.4.1.9 (A:2-73) Putative transcriptional regulator {Rhodococcus sp. rha1 [TaxId: 101510]}
Probab=22.00 E-value=23 Score=22.04 Aligned_cols=12 Identities=50% Similarity=0.927 Sum_probs=9.5
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|-|.+|+||+..
T Consensus 35 s~~~ly~~F~~K 46 (72)
T d2g3ba1 35 SPGLLYYHFKDR 46 (72)
T ss_dssp CHHHHHHHHCSH
T ss_pred CHHHHHHHCcCH
Confidence 568899999864
No 33
>d2zkmx2 b.7.1.1 (X:678-799) Phospholipase C-beta-2 {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.65 E-value=13 Score=26.01 Aligned_cols=9 Identities=33% Similarity=0.700 Sum_probs=7.6
Q ss_pred ccCCCCCCC
Q 028233 175 KLNLDWTEP 183 (211)
Q Consensus 175 ~lNP~W~~~ 183 (211)
.|||.||++
T Consensus 47 ~~nP~wne~ 55 (122)
T d2zkmx2 47 SINPVWKEE 55 (122)
T ss_dssp CSSCBCCCC
T ss_pred eecceEccc
Confidence 599999983
No 34
>d2id3a1 a.4.1.9 (A:13-80) Putative transcriptional regulator SCO5951 {Streptomyces coelicolor [TaxId: 1902]}
Probab=20.79 E-value=15 Score=22.85 Aligned_cols=12 Identities=25% Similarity=0.609 Sum_probs=9.8
Q ss_pred chhhhHHHHHHH
Q 028233 104 SAGLVYKHFGKE 115 (211)
Q Consensus 104 SAGLIykhfG~e 115 (211)
|.|.+|+||+..
T Consensus 39 s~~~iY~~F~~k 50 (68)
T d2id3a1 39 GKTTVYRRWGTP 50 (68)
T ss_dssp CHHHHHHHHCSH
T ss_pred CHHHHHHHCcCH
Confidence 678999999854
Done!