BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028237
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 436 bits (1120), Expect = e-122, Method: Compositional matrix adjust.
Identities = 208/210 (99%), Positives = 209/210 (99%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 210
ESYGIKVGYGGIPGPSGGRDGS+SQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 388 bits (997), Expect = e-107, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 196/210 (93%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NM+IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDLAH+RAVS EEG+QFAKEHGL+F+EASA+TAQNVEEAFI+TAA I + IQDGVFDVSN
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180
Query: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 210
ES GIK+GYG G +GGRDG+ SQ GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 386 bits (991), Expect = e-107, Method: Compositional matrix adjust.
Identities = 185/193 (95%), Positives = 188/193 (97%), Gaps = 1/193 (0%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 ESYGIKVGYGGIP 193
ESYGIKVGY IP
Sbjct: 181 ESYGIKVGY-AIP 192
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 383 bits (984), Expect = e-106, Method: Compositional matrix adjust.
Identities = 182/189 (96%), Positives = 185/189 (97%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI IDNKPIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDL+HRRAVS EEGEQFAKEHGLIFMEASAKTAQNVEEAF+KTA IYKKIQDGVFDVSN
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 ESYGIKVGY 189
ESYGIKVGY
Sbjct: 181 ESYGIKVGY 189
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 378 bits (970), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/213 (85%), Positives = 191/213 (89%), Gaps = 3/213 (1%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 ESYGIKVGYG-GIPGPSGGR--DGSSSQAGGCC 210
ESYGIKVGYG G GP + +G + ++ CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 376 bits (966), Expect = e-104, Method: Compositional matrix adjust.
Identities = 183/213 (85%), Positives = 192/213 (90%), Gaps = 3/213 (1%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMI ID K IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHAN NMTIMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDL HRRAV+TEEGEQFAKEHGLIF+E SA+TA NVEEAFI TA IYKKIQDGVFDVSN
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 ESYGIKVGY-GGIPGPSGGR--DGSSSQAGGCC 210
ESYGIKVGY GG GP + +G ++++ CC
Sbjct: 181 ESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 351 bits (900), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 171/211 (81%), Positives = 183/211 (86%), Gaps = 8/211 (3%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAY FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ ITIDNKPIKLQIW
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHLASWLE+ARQHA+ NMT MLIGNK
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
CDL +R VSTEEGEQFA+EHGLIFMEASAKTA NVEEAF++TAATIYK+IQDGV D +N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180
Query: 181 ESYGIKVGYGGIPGPSGGRDGSSSQA-GGCC 210
E G PGP GG+D SSSQ GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 339 bits (869), Expect = 8e-93, Method: Compositional matrix adjust.
Identities = 162/194 (83%), Positives = 172/194 (88%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQDGVFD++N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 181 ESYGIKVGYGGIPG 194
E+ GIK+G P
Sbjct: 181 EANGIKIGPQHSPA 194
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 338 bits (867), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 165/212 (77%), Positives = 178/212 (83%), Gaps = 2/212 (0%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG--YGGIPGPSGGRDGSSSQAGGCC 210
E+ GIK+G + G G GGCC
Sbjct: 181 EANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 337 bits (863), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 337 bits (863), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 337 bits (863), Expect = 5e-92, Method: Compositional matrix adjust.
Identities = 159/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 335 bits (860), Expect = 9e-92, Method: Compositional matrix adjust.
Identities = 158/188 (84%), Positives = 171/188 (90%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLT+GVEFGARMITID K IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL +WLEDARQH+N+NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ+GVFD++N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 335 bits (858), Expect = 2e-91, Method: Compositional matrix adjust.
Identities = 165/216 (76%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID K IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQH+++NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEAFI TA IY+KIQ G+FDV N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 ESYGIKVG----YGGIPGPSGGRDGSSS--QAGGCC 210
E+ GIK+G GPS + S GCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 331 bits (849), Expect = 2e-90, Method: Compositional matrix adjust.
Identities = 158/210 (75%), Positives = 181/210 (86%), Gaps = 7/210 (3%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y++LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNK IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQESFRSITRSYYRG+AGALLVYDITRR+TFNHL WL+DAR +AN+NMTI+LIGNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSD 121
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
+ +RAVS EEG QFA E+GLIF+E SAKTA NVEEAF+ TA+ IY+KIQ G FD++NES
Sbjct: 122 MESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNES 181
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQ--AGGCC 210
+GIK+G P+ +DG+ + GGCC
Sbjct: 182 FGIKLG-----APTSKQDGTDQKPAGGGCC 206
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 330 bits (845), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 157/188 (83%), Positives = 168/188 (89%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
M+YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID K IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQH+++NM IMLIGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
DL RR V EEGE FA+EHGLIFME SAKTA NVEEA+I TA IY+KIQ G+FDV N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHN 180
Query: 181 ESYGIKVG 188
E+ GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 154/210 (73%), Gaps = 5/210 (2%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+I + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL+SWL DAR N N I+LIGNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL +R V+ EE +QFA+E+GL+F+EASAKT +NVE+AF++ A IY+ IQDG D++
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAG--GC 209
G++ P GGR S Q GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 245 bits (626), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 115/178 (64%), Positives = 140/178 (78%)
Query: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Y Y+FKYIIIGD GVGKSCLL QFT+ +F P TIGVEFG R++ ++NK IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL +WL DAR N N IMLIGNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDV 178
DL +R V+ EE FAK++GLIF+E+SAKT +NVEEAF++TA I++ +Q+G D+
Sbjct: 123 KDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDL 180
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 138/180 (76%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
SY +LFKYI++GD+ VGKS LLLQF DKRF P D TIGVEFG+R I I++K IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRSITR+YYRGA A++VYDITRR++F L SWL D R+ ++ ++T +LIGNK
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKA 139
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R VST E ++FA+++GL+F E SAKTA NV+EAF K+ I KK++ +SNE
Sbjct: 140 DLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLESNPGLLSNE 199
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 220 bits (561), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 144/210 (68%), Gaps = 2/210 (0%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG+++I++ NK +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 SYGIKVGYGGIPGPSGGR--DGSSSQAGGC 209
GI+ G + R S Q GC
Sbjct: 184 GSGIQYGDAALRQLRSPRRAQAESIQECGC 213
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 135/187 (72%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + K +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A TI KI G D
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 SYGIKVG 188
GI+ G
Sbjct: 184 GSGIQYG 190
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 135/187 (72%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + K +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A TI KI G D
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 SYGIKVG 188
GI+ G
Sbjct: 184 GSGIQYG 190
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 135/187 (72%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + K +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A TI KI G D
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 SYGIKVG 188
GI+ G
Sbjct: 184 GSGIQYG 190
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 105/187 (56%), Positives = 135/187 (72%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + K +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LA+WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A TI KI G D
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 SYGIKVG 188
GI+ G
Sbjct: 184 GSGIQYG 190
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 217 bits (552), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 SYGIKVGYGGIPGPSGGR--DGSSSQAGGC 209
GI+ G + R S+Q GC
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPSAQECGC 218
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 216 bits (551), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 141/208 (67%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAGGC 209
GI+ G + R + A C
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPNAQEC 216
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 216 bits (550), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 SYGIKVGYGGIPGPSGGR--DGSSSQAGGC 209
GI+ G + R S+Q GC
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECGC 218
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 216 bits (550), Expect = 9e-56, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 144/210 (68%), Gaps = 1/210 (0%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + K +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF+K A +I KI+ G D
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERM 183
Query: 182 SYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
GI+ G + R GS++Q C+
Sbjct: 184 GSGIQYGDASLRQIRQPR-GSAAQTKQQCN 212
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 215 bits (548), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 143/210 (68%), Gaps = 2/210 (0%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
+Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG+++I + K +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L +WL DAR A+ N+ ++L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 128
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
DL R V+ E +FA+E+ L+F+E SA T +NVEEAF++ A I KI+ G D
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 SYGIKVGYGGIPGPSGGR--DGSSSQAGGC 209
GI+ G + R S+Q GC
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECGC 218
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 207 bits (527), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 134/208 (64%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL++FT F TIGVEF R I +DNK IK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+HA++N+ IML+GNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RAVSTEE + FA E+ L F+E SA A NVEEAF I++ + + + ++
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCC 210
G P+ + CC
Sbjct: 187 VHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 100/213 (46%), Positives = 134/213 (62%), Gaps = 11/213 (5%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D+K IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H + N+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H AV TE+ + FA++ L FME SA A NVE AF + I+ + + ++ES
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
Query: 183 YGIKVGYGGIPGPSG----GRDGSSSQAGGCCS 211
+P G+D S+ + GGCCS
Sbjct: 190 -------ANVPSKGDKIDIGKDVSAVKKGGCCS 215
>sp|Q9FJH0|RAA1F_ARATH Ras-related protein RABA1f OS=Arabidopsis thaliana GN=RABA1F PE=2
SV=1
Length = 217
Score = 203 bits (516), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +AN+ IM +GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RAVSTE+ + FA+ FME SA + NVE AF + + IY+ + D+ ++
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
+ G G D S+ + GCCS
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCS 216
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 200 bits (509), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 131/211 (62%), Gaps = 10/211 (4%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
Y+FK ++IGD+ VGK+ LL +F F TIGVEF + + IDNK +K QIWDTAG
Sbjct: 14 YVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTAG 73
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
QE +R++T +YYRGA GA+LVYD+T+R++F+H+A WLE+ R HA+ N+ IMLIGNKCDL
Sbjct: 74 QERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDLG 133
Query: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVF-----DVS 179
RAV TE+ ++FA+ L FME SA A NVE AF+ IY+ I D
Sbjct: 134 SLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDAD 193
Query: 180 NESYGIKVGYGGIPGPSGGRDGSSSQAGGCC 210
S +K IP S + GGCC
Sbjct: 194 GNSSLLKGTRIIIPSEQ-----ESGKRGGCC 219
>sp|O49513|RAA1E_ARATH Ras-related protein RABA1e OS=Arabidopsis thaliana GN=RABA1E PE=2
SV=1
Length = 217
Score = 199 bits (507), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 130/209 (62%), Gaps = 2/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D K IK Q+WDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ R H +AN+ IML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RAV TEE F++ + FME SA A NVE+AF IY+ + D + +
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
+ G G D ++ ++ GCCS
Sbjct: 190 MSLPKGQTIDIGNKD--DVTAVKSSGCCS 216
>sp|Q01111|YPT3_NICPL Ras-related protein YPT3 OS=Nicotiana plumbaginifolia GN=YPT3 PE=2
SV=1
Length = 218
Score = 199 bits (506), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 131/214 (61%), Gaps = 11/214 (5%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDNK IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR T+ ++ WL++ R H + N+ +MLIGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H AVST+E + A+ GL FME SA A NVE AF + IY+ + + +E
Sbjct: 130 LRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEAGDE- 188
Query: 183 YGIKVGYGGIPGPSG-----GRDGSSSQAGGCCS 211
G P G +GSS + GCCS
Sbjct: 189 -----GATSSAPPKGETINIKDEGSSWKKFGCCS 217
>sp|Q9LK99|RAA1G_ARATH Ras-related protein RABA1g OS=Arabidopsis thaliana GN=RABA1G PE=2
SV=1
Length = 217
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 129/209 (61%), Gaps = 2/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y +L+K ++IGD+GVGKS LL +FT F TIGVEF R I +D K +K QIWDT
Sbjct: 10 YDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H AN+ IML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKAD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RAVSTE+ + FA+ FME SA A NVE AF + + IY+ D+ ++
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDH 189
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
+ G G D S + GCCS
Sbjct: 190 TTLPKGQSINVGSKD--DVSEVKKVGCCS 216
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 199 bits (505), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 130/209 (62%), Gaps = 1/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF R I +D K IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA++N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSD 128
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H R V TE + F + GL F+E SA + NVE+AF + IY + V D +
Sbjct: 129 LKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNR 188
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
I G I + DG + GGCCS
Sbjct: 189 PKIGEGRDVIVIDNAHDDGGKKK-GGCCS 216
>sp|P17609|YPT2_SCHPO GTP-binding protein ypt2 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt2 PE=3 SV=1
Length = 200
Score = 199 bits (505), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 131/187 (70%)
Query: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWD 61
SY YL K ++IGD+GVGKSCLLL+F++ F P TIG++F R I +D K IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKC 121
TAGQE FR+IT +YYRGA G LL+YD+T +++F+++ +W + QHA+ N+ +LIGNKC
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKC 124
Query: 122 DLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNE 181
D +R VS E+G+ A E G+ F+EASAKT NV+EAF A I K+ D + SN+
Sbjct: 125 DCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
Query: 182 SYGIKVG 188
+ + +G
Sbjct: 185 ANNVDLG 191
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/217 (47%), Positives = 132/217 (60%), Gaps = 17/217 (7%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +FT F TIGVEF + + +D K +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + A WL++ R H + N+ +MLIGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDV--SN 180
L H AV TE+G+ FA+ L FME SA A NVE AF + IY+ + + S
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEAGDSG 189
Query: 181 ESYGIKVGYGGIPGPSGGR------DGSSSQAGGCCS 211
S G+ PS G+ D S + GCCS
Sbjct: 190 SSSGL---------PSKGQTINVKEDSSVLKRFGCCS 217
>sp|Q1PEX3|RAA1H_ARATH Ras-related protein RABA1h OS=Arabidopsis thaliana GN=RABA1H PE=2
SV=1
Length = 218
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 129/209 (61%), Gaps = 1/209 (0%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++ GD+GVGKS LL +FT F TIGVEF R I +D+K +K QIWDT
Sbjct: 10 YDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +AN IML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKAD 129
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RA+STEE + FA+ FME SA A NVE AF + IY+ + D ++
Sbjct: 130 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP 189
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
+ G + D S+ + GCC+
Sbjct: 190 -TTALPKGQMINVGSRDDVSAVKKSGCCA 217
>sp|Q54DA7|RAB4_DICDI Ras-related protein Rab-4 OS=Dictyostelium discoideum GN=rab4 PE=3
SV=1
Length = 205
Score = 198 bits (503), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 93/183 (50%), Positives = 128/183 (69%), Gaps = 2/183 (1%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDTAG 64
YL K+IIIG VGKSCLL +F D +F+ TIGV+F +R++ I K +KLQIWDTAG
Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAG 65
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCDLA 124
QE FRS+ SYYRG+AG LVYD+T RE++NH+ +WL D + A+ ++TI+L+GNK DL
Sbjct: 66 QERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLT 125
Query: 125 HRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNESYG 184
+R V+ E + A+E+GL+FME SA T + VEE F+K TI KI G +V+ E G
Sbjct: 126 EQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSG--EVNLEHLG 183
Query: 185 IKV 187
+++
Sbjct: 184 VQI 186
>sp|Q40521|RB11B_TOBAC Ras-related protein Rab11B OS=Nicotiana tabacum GN=RAB11B PE=2 SV=1
Length = 217
Score = 198 bits (503), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 131/209 (62%), Gaps = 3/209 (1%)
Query: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 62
Y YLFK ++IGD+GVGKS LL +F+ F TIGVEF R I +D+K +K QIWDT
Sbjct: 11 YDYLFKLVLIGDSGVGKSNLLSRFSRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDITR TF ++ WL++ R H + N+ IML+GNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALVVYDITRHVTFENVERWLKELRDHTDQNIVIMLVGNKAD 130
Query: 123 LAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSNES 182
L H RAVSTE+ + FA+ FME SA + NVE AF + IYK + +V ++
Sbjct: 131 LRHLRAVSTEDAKAFAERENTFFMETSALESLNVENAFTEVLTEIYKVVCRKALEVGDDP 190
Query: 183 YGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
+ G G D S+ + GCCS
Sbjct: 191 AALPKGQ---TINVGKDDVSAVKKVGCCS 216
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.401
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,091,271
Number of Sequences: 539616
Number of extensions: 2954100
Number of successful extensions: 13706
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1023
Number of HSP's successfully gapped in prelim test: 146
Number of HSP's that attempted gapping in prelim test: 11709
Number of HSP's gapped (non-prelim): 1204
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)