BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028238
(211 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3IIR|A Chain A, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
pdb|3IIR|B Chain B, Crystal Structure Of Miraculin Like Protein From Seeds Of
Mu Koenigii
Length = 190
Score = 204 bits (520), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 111/190 (58%), Positives = 133/190 (70%), Gaps = 6/190 (3%)
Query: 26 LHDINGDDVRADQEYY---VLESGNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKA 82
L DING+ V A ++YY V+ G GLT R R + CPLDV Q++ G L+F A
Sbjct: 3 LLDINGNVVEASRDYYLVSVIGGAGGGGLTLYRGRNELCPLDVIQLSPDLHKGTRLRFAA 62
Query: 83 YNSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNW 142
YN++ I+EAVDLNVKFS SC++ VW+VDNYD RGKWFITTGG EG+PGA+TL NW
Sbjct: 63 YNNTSIIHEAVDLNVKFSTETSCNEPTVWRVDNYDPSRGKWFITTGGVEGNPGAQTLKNW 122
Query: 143 FKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVLKADYEPVFPVVIFP 202
FK ER+GT D TY IV+CPSVC SC+FLC +VGVS+ D RRL L A E VF VVI P
Sbjct: 123 FKLERVGT-DQGTYEIVHCPSVCKSCVFLCNDVGVSY-DYRRRLALTAGNERVFGVVIVP 180
Query: 203 A-EGAAKCES 211
A EG+A C S
Sbjct: 181 ANEGSASCVS 190
>pdb|3S8J|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8J|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 2.6a Resolution
pdb|3S8K|A Chain A, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
pdb|3S8K|B Chain B, Crystal Structure Of A Papaya Latex Serine Protease
Inhibitor (Ppi) At 1.7a Resolution
Length = 184
Score = 87.4 bits (215), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 97/182 (53%), Gaps = 17/182 (9%)
Query: 17 AAKPLVGSRLHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDS--CPLDVAQVTSAP 72
A KP+V DI+G V +Y+V+ + G G G T+ G+ CPL V Q
Sbjct: 2 APKPIV-----DIDGKPVLYGVDYFVVSAIWGAGGGGLTVYGPGNKKKCPLSVVQ--DPF 54
Query: 73 RTGKPLKFKAYNSSR--FIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGN 130
G+P+ F A + + + E+VDLNVKF+I +C+++ WKVD + G W +T GG
Sbjct: 55 DNGEPIIFSAIKNVKDNIVRESVDLNVKFNITINCNETTAWKVDRFPGVIG-WTVTLGGE 113
Query: 131 EGDPGAKTLLNWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFED-SARRLVLK 189
+G G ++ + FK ++ G P +Y+ +CPS + L C NV + F+ RRL+L
Sbjct: 114 KGYHGFESTHSMFKIKKAGL--PFSYKFHFCPSYPRTRLIPCNNVDIFFDKYRIRRLILT 171
Query: 190 AD 191
D
Sbjct: 172 ND 173
>pdb|1AVA|C Chain C, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|1AVA|D Chain D, Amy2BASI PROTEIN-Protein Complex From Barley Seed
pdb|3BX1|D Chain D, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
pdb|3BX1|C Chain C, Complex Between The Barley Alpha-AmylaseSUBTILISIN
Inhibitor And The Subtilisin Savinase
Length = 181
Score = 70.1 bits (170), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 53/181 (29%), Positives = 85/181 (46%), Gaps = 16/181 (8%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
+HD +G ++RAD YYVL + +G GLT G CPL V+Q + G P++ Y
Sbjct: 6 VHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVRITPY 65
Query: 84 N---SSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLL 140
S + I + D+ + F +C S W +D+ + G+ + TG + DP
Sbjct: 66 GVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHIDS-ELAAGRRHVITGPVK-DPSPSGRE 123
Query: 141 NWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVLKADYEPVFPVVI 200
N F+ E+ ++ Y+++ SC CQ++GV F D EP + VV+
Sbjct: 124 NAFRIEKYSGAEVHEYKLM-------SCGDWCQDLGV-FRDLKGGAWFLGATEP-YHVVV 174
Query: 201 F 201
F
Sbjct: 175 F 175
>pdb|2IWT|B Chain B, Thioredoxin H2 (Hvtrxh2) In A Mixed Disulfide Complex With
The Target Protein Basi
Length = 189
Score = 66.6 bits (161), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 16/181 (8%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
+HD +G ++RAD YYVL + +G GLT G CPL V+Q + G P++ Y
Sbjct: 14 VHDTDGHELRADANYYVLSANRAHGGGLTMAPGHGRHCPLFVSQDPNGQHDGFPVRITPY 73
Query: 84 N---SSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLL 140
S + I + D+ + F +C S W +D+ + G+ + TG + DP
Sbjct: 74 GVAPSDKIIRLSTDVRISFRAYTTCLQSTEWHIDS-ELAAGRRHVITGPVK-DPSPSGRE 131
Query: 141 NWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVLKADYEPVFPVVI 200
N F+ E+ ++ Y+++ S CQ++GV F D EP + VV+
Sbjct: 132 NAFRIEKYSGAEVHEYKLM-------SSGDWCQDLGV-FRDLKGGAWFLGATEP-YHVVV 182
Query: 201 F 201
F
Sbjct: 183 F 183
>pdb|1R8N|A Chain A, The Crystal Structure Of The Kunitz (Sti) Type Inhibitor
From Seeds Of Delonix Regia
Length = 185
Score = 64.7 bits (156), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/191 (26%), Positives = 93/191 (48%), Gaps = 14/191 (7%)
Query: 25 RLHDINGDDVRADQEYYVLESGNGRGLTTLRHRGDS---CPLDVAQVTSAPRTGKPLKFK 81
+++DI G V EYY++ + G G +R CP+ + Q S + G P++F
Sbjct: 5 KVYDIEGYPVFLGSEYYIVSAIIGAGGGGVRPGRTRGSMCPMSIIQEQSDLQMGLPVRFS 64
Query: 82 AYNSSR-FIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLL 140
+ + IY +L ++F C++S W + + G+ + GG+E P + +
Sbjct: 65 SPEEKQGKIYTDTELEIEFVEKPDCAESSKWVIVK---DSGEARVAIGGSEDHPQGELVR 121
Query: 141 NWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVLKADYEPVFPVVI 200
+FK E++G+ Y++V+CP + C ++G+++E R LVLK+ + F VV
Sbjct: 122 GFFKIEKLGS---LAYKLVFCPKSDSGS---CSDIGINYE-GRRSLVLKSSDDVPFRVVF 174
Query: 201 FPAEGAAKCES 211
++ ES
Sbjct: 175 VKPRSGSETES 185
>pdb|2QN4|A Chain A, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
pdb|2QN4|B Chain B, Structure And Function Study Of Rice Bifunctional Alpha-
AmylaseSUBTILISIN INHIBITOR FROM ORYZA SATIVA
Length = 200
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/184 (33%), Positives = 86/184 (46%), Gaps = 28/184 (15%)
Query: 8 AISFLLLAFAAKPLVGSRLHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDV 65
AISF AA P V +D G ++ AD YYVL + G+G GLT + R CPL V
Sbjct: 15 AISFSC--SAAPPPV----YDTEGHELSADGSYYVLPASPGHGGGLT-MAPRVLPCPLLV 67
Query: 66 AQVTSAPRTGKPLKFKAYNSS-----RFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEER 120
AQ T R G P++F + + R I + D+ ++F+ C S W V + +
Sbjct: 68 AQETDERRKGFPVRFTPWGGAAAPEDRTIRVSTDVRIRFNAATICVQSTEWHVGD-EPLT 126
Query: 121 GKWFITTGGNEGDPGAKTLLNWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFE 180
G + TG G P N F+ E+ G Y++V SC CQ++GVS
Sbjct: 127 GARRVVTGPLIG-PSPSGRENAFRVEKYG----GGYKLV-------SCRDSCQDLGVS-R 173
Query: 181 DSAR 184
D AR
Sbjct: 174 DGAR 177
>pdb|3TC2|A Chain A, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|B Chain B, Crystal Structure Of Potato Serine Protease Inhibitor.
pdb|3TC2|C Chain C, Crystal Structure Of Potato Serine Protease Inhibitor
Length = 187
Score = 61.6 bits (148), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/123 (34%), Positives = 61/123 (49%), Gaps = 13/123 (10%)
Query: 74 TGKPLKFKAYNSSRF---IYEAVDLNVKFSIVDS--CSDSLVWKVDNYDEERGKWFITTG 128
+G P++F +SS F I+E LN++F+I S C +WKV +YD G + TG
Sbjct: 62 SGTPVRFIG-SSSHFGQGIFEDELLNIQFAISTSKMCVSYTIWKVGDYDASLGTMLLETG 120
Query: 129 GNEGDPGAKTLLNWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVL 188
G G + +WFK + S Y ++YCP +S C VGV ++ RRL L
Sbjct: 121 GTIGQADS----SWFKIVK---SSQFGYNLLYCPVTTSSDDQFCLKVGVVHQNGKRRLAL 173
Query: 189 KAD 191
D
Sbjct: 174 VKD 176
>pdb|1TIE|A Chain A, Crystal Structure Of A Kunitz-Type Trypsin Inhibitor From
Erythrina Caffra Seeds
Length = 172
Score = 53.5 bits (127), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 46/171 (26%), Positives = 83/171 (48%), Gaps = 16/171 (9%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D NG+ V+ YY+L G G+ + ++CPL V Q + GKP++ ++
Sbjct: 2 LLDGNGEVVQNGGTYYLLPQVWAQGGGVQLAKTGEETCPLTVVQSPNELSDGKPIRIESR 61
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNW- 142
S FI + + + F+ C+ S W V DE+ G ++ +E + T ++
Sbjct: 62 LRSAFIPDDDKVRIGFAYAPKCAPSPWWTVVE-DEQEG---LSVKLSEDE---STQFDYP 114
Query: 143 FKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSA-RRLVLKADY 192
FKFE++ + +Y+++YC C ++G++ + RRLV+ DY
Sbjct: 115 FKFEQV-SDQLHSYKLLYCEGKHEKCA----SIGINRDQKGYRRLVVTEDY 160
>pdb|1R8O|A Chain A, Crystal Structure Of An Unusual Kunitz-Type Trypsin
Inhibitor From Copaifera Langsdorffii Seeds
Length = 96
Score = 51.2 bits (121), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 47/95 (49%), Gaps = 4/95 (4%)
Query: 25 RLHDINGDDVRAD-QEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFK 81
RL D +G + D EYY+L S G G GL + G+ CPL V Q S G P++FK
Sbjct: 1 RLVDTDGKPIENDGAEYYILPSVRGKGGGLVLAKSGGEKCPLSVVQSPSELSNGLPVRFK 60
Query: 82 AYNSSRFIYEAVDLNVKFSIVDSCS-DSLVWKVDN 115
A S++I + L ++ C+ +W V +
Sbjct: 61 ASPRSKYISVGMLLGIEVIESPECAPKPSMWSVKS 95
>pdb|4AN7|B Chain B, Kunitz Type Trypsin Inhibitor Complex With Porcine Trypsin
Length = 185
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 26 LHDINGDDVRADQ-EYYVLESGNGRGLTTLRHRGD--SCPLDVAQVTSAPRTGKPLKFKA 82
+HD +G V + +YY+L + G+G D +CPL V+Q G P++F +
Sbjct: 4 VHDTDGKPVLNNAGQYYILPAKQGKGGGLGLSNDDDGNCPLTVSQTPIDIPIGLPVRFSS 63
Query: 83 YNSSRFIYEAVDLNVKFSIVDSCSDSLV-WKVDNYDEERGKWFITTGGNEGDPGAKTLLN 141
I A+ LN++F+I +C+ W++ +DE+ + T D +
Sbjct: 64 RARISHITTALSLNIEFTIAPACAPKPARWRI--FDEQSSEKGYTPVKISDDFSSAAPFQ 121
Query: 142 WFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSA-RRLVLK 189
KFE Y++VYC S S C ++G+ ++ RRLVLK
Sbjct: 122 IKKFEE-------DYKLVYC-SKSESGERKCVDLGIKIDNEKNRRLVLK 162
>pdb|4AN6|A Chain A, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
pdb|4AN6|B Chain B, Kuntiz Type Trypsin Inhibitor With Factor Xa Inhibitory
Activity
Length = 185
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 47/169 (27%), Positives = 78/169 (46%), Gaps = 15/169 (8%)
Query: 26 LHDINGDDVRADQ-EYYVLESGNGRGLTTLRHRGD--SCPLDVAQVTSAPRTGKPLKFKA 82
+HD +G V + +YY+L + G+G D +CPL V+Q G P++F +
Sbjct: 4 VHDTDGKPVLNNAGQYYILPAKQGKGGGLGLSNDDDGNCPLTVSQTPIDLPIGLPVRFSS 63
Query: 83 YNSSRFIYEAVDLNVKFSIVDSCSDSLV-WKVDNYDEERGKWFITTGGNEGDPGAKTLLN 141
I A+ LN++F+I +C+ W++ ++E+ + T D +
Sbjct: 64 RARISHITTALSLNIEFTIAPACAPKPARWRI--FNEQSSEKGYTPVKISDDFSSAAPFQ 121
Query: 142 WFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSA-RRLVLK 189
KFE Y++VYC S S C ++G+ +D RRLVLK
Sbjct: 122 IKKFEE-------DYKLVYC-SKSESGERKCVDLGIKIDDEKNRRLVLK 162
>pdb|2ET2|A Chain A, Crystal Structure Of An Asn To Ala Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 48.1 bits (113), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/138 (27%), Positives = 64/138 (46%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V A YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVEAGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|2BEA|A Chain A, Crystal Structure Of Asn14 To Gly Mutant Of Wci
pdb|2BEA|B Chain B, Crystal Structure Of Asn14 To Gly Mutant Of Wci
Length = 186
Score = 47.0 bits (110), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVEGGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|3I2A|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
pdb|3I2A|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Protein
St Wci(S)
Length = 187
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 8 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSP 67
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
RFI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 68 YRIRFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 121
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 122 KFEKVSHSNIHVYKLLYC 139
>pdb|2BEB|A Chain A, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
pdb|2BEB|B Chain B, X-Ray Structure Of Asn To Thr Mutant Of Winged Bean
Chymotrypsin Inhibitor
Length = 186
Score = 46.6 bits (109), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVETGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|3I29|B Chain B, Crystal Structure Of A Binary Complex Between An Mutant
Tryp Inhibitor With Bovine Trypsin
Length = 187
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 8 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 67
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 68 YRSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 121
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 122 KFEKVSHSNIHVYKLLYC 139
>pdb|2ESU|A Chain A, Crystal Structure Of Asn To Gln Mutant Of Winged Bean
Chymotrypsin Inhibitor Protein
Length = 186
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVEQGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|1FMZ|A Chain A, Crystal Structure Of A Mutant Winged Bean Chymotrypsin
Inhibitor Protein, N14k
Length = 186
Score = 46.6 bits (109), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVEKGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|2QYI|B Chain B, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|2QYI|D Chain D, Crystal Structure Of A Binary Complex Between An
Engineered Trypsin Inhibitor And Bovine Trypsin
pdb|3VEQ|A Chain A, A Binary Complex Betwwen Bovine Pancreatic Trypsin And A
Engineered Mutant Trypsin Inhibitor
Length = 183
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 63
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 64 FRSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 117
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 118 KFEKVSHSNIHVYKLLYC 135
>pdb|3I2X|A Chain A, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
pdb|3I2X|B Chain B, Crystal Structure Of A Chimeric Trypsin Inhibitor Having
Rea Loop Of Eti On The Scaffold Of Wci
Length = 187
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 8 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSR 67
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 68 LRSAFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 121
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 122 KFEKVSHSNIHVYKLLYC 139
>pdb|1XG6|A Chain A, The Crystal Structure Of The P1 Mutant (Leu To Arg)of A
Winged Bean Chymotrypsin Inhibitor(Kunitz)solved At
2.15a Resolution
Length = 187
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 8 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 67
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 68 FRSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 121
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 122 KFEKVSHSNIHVYKLLYC 139
>pdb|1EYL|A Chain A, Structure Of A Recombinant Winged Bean Chymotrypsin
Inhibitor
Length = 186
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|4WBC|A Chain A, 2.13 A Structure Of A Kunitz-Type Winged Bean Chymotrypsin
Inhibitor Protein
pdb|1WBC|A Chain A, Crystallization And Preliminary X-Ray Studies Of
Psophocarpin B1, A Chymotrypsin Inhibitor From Winged
Bean Seeds
pdb|2WBC|A Chain A, Refined Crystal Structure (2.3 Angstrom) Of A Winged Bean
Chymotrypsin Inhibitor And Location Of Its Second
Reactive Site
Length = 183
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 4 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 63
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 64 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 117
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 118 KFEKVSHSNIHVYKLLYC 135
>pdb|1FN0|A Chain A, Structure Of A Mutant Winged Bean Chymotrypsin Inhibitor
Protein, N14d
Length = 186
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 7 LVDAEGNLVEDGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSQ 66
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V D +G + + P L+ F
Sbjct: 67 FLSLFIPRGSLVALGFANPPSCAASPWWTV--VDSPQGPAVKLS--QQKLPEKDILV--F 120
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 121 KFEKVSHSNIHVYKLLYC 138
>pdb|3QYD|A Chain A, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|C Chain C, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
pdb|3QYD|B Chain B, Crystal Structure Of A Recombinant Chimeric Trypsin
Inhibitor
Length = 181
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/138 (25%), Positives = 60/138 (43%), Gaps = 8/138 (5%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
L D G+ V YY+L +G G+ T + + CPL V + + G+P++ +
Sbjct: 8 LVDAEGNLVENGGTYYLLPHIWAHGGGIETAKTGNEPCPLTVVRSPNEVSKGEPIRISSR 67
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWF 143
S FI + + F+ SC+ S W V + + E D + F
Sbjct: 68 LRSAFIPRGSLVRLGFANPPSCAASPWWTVVDSPQGPAVKLSQQKLPEKD------IYVF 121
Query: 144 KFERIGTSDPATYRIVYC 161
KFE++ S+ Y+++YC
Sbjct: 122 KFEKVSHSNIHVYKLLYC 139
>pdb|2GO2|A Chain A, Crystal Structure Of Bbki, A Kunitz-Type Kallikrein
Inhibitor
Length = 163
Score = 42.4 bits (98), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/168 (27%), Positives = 69/168 (41%), Gaps = 20/168 (11%)
Query: 28 DINGDDVRADQE-YYVLESGNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAYNSS 86
D NG V + YY++ +G L G+ + R G P++F++
Sbjct: 6 DTNGQPVSNGADAYYLVPVSHGHAGLALAKIGNEAEPRAVVLDPHHRPGLPVRFESPLRI 65
Query: 87 RFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNWFKFE 146
I E+ LN+KF S SDS VW V D +T K+LL FK E
Sbjct: 66 NIIKESYFLNIKFG--PSSSDSGVWDVIQQDPIGLAVKVTD--------TKSLLGPFKVE 115
Query: 147 RIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFEDSARRLVLKADYEP 194
+ G Y+IVY P + L ++G+ + L +K D EP
Sbjct: 116 KEGEG----YKIVYYPERGQTGL----DIGLVHRNDKYYLAVK-DGEP 154
>pdb|1BA7|A Chain A, Soybean Trypsin Inhibitor
pdb|1BA7|B Chain B, Soybean Trypsin Inhibitor
pdb|1AVU|A Chain A, Trypsin Inhibitor From Soybean (Sti)
Length = 181
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 26/176 (14%)
Query: 28 DINGDDVRADQEYYVLES----GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
D G+ + YY+L G R T R CPL V Q + G +
Sbjct: 5 DNEGNPLENGGTYYILSDITAFGGIRAAPTGNER---CPLTVVQSRNELDKGIGTIISSP 61
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLN-- 141
RFI E L++KF S +++ E W + EG P K N
Sbjct: 62 YRIRFIAEGHPLSLKFD-----SFAVIMLCVGIPTE---WSVVEDLPEG-PAVKIGENKD 112
Query: 142 ----WFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSF--EDSARRLVLKAD 191
WF+ ER+ + Y++V+CP C ++G+S +D RRLV+ +
Sbjct: 113 AMDGWFRLERVSDDEFNNYKLVFCPQQAEDD--KCGDIGISIDHDDGTRRLVVSKN 166
>pdb|1AVW|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Orthorhombic Crystal Form
pdb|1AVX|B Chain B, Complex Porcine Pancreatic TrypsinSOYBEAN TRYPSIN
Inhibitor, Tetragonal Crystal Form
Length = 177
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 46/176 (26%), Positives = 69/176 (39%), Gaps = 26/176 (14%)
Query: 28 DINGDDVRADQEYYVLES----GNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAY 83
D G+ + YY+L G R T R CPL V Q + G +
Sbjct: 5 DNEGNPLENGGTYYILSDITAFGGIRAAPTGNER---CPLTVVQSRNELDKGIGTIISSP 61
Query: 84 NSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLN-- 141
RFI E L++KF S +++ E W + EG P K N
Sbjct: 62 YRIRFIAEGHPLSLKFD-----SFAVIMLCVGIPTE---WSVVEDLPEG-PAVKIGENKD 112
Query: 142 ----WFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSF--EDSARRLVLKAD 191
WF+ ER+ + Y++V+CP C ++G+S +D RRLV+ +
Sbjct: 113 AMDGWFRLERVSDDEFNNYKLVFCPQQAEDD--KCGDIGISIDHDDGTRRLVVSKN 166
>pdb|2DRE|A Chain A, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|B Chain B, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|C Chain C, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
pdb|2DRE|D Chain D, Crystal Structure Of Water-Soluble Chlorophyll Protein
From Lepidium Virginicum At 2.00 Angstrom Resolution
Length = 180
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/143 (26%), Positives = 66/143 (46%), Gaps = 21/143 (14%)
Query: 26 LHDINGDDVRADQEYYVLES--GNGRGLTT----LRHRGDSCPLDVAQVTSAPRTGKPLK 79
+ D NG+ ++ + Y++ + NG GL L H CPL + + + + G P+
Sbjct: 7 VKDTNGNPLKIETRYFIQPASDNNGGGLVPANVDLSHL---CPLGIVRTSLPYQPGLPVT 63
Query: 80 FKAYNSSRFIYEAVDLNVKFSI---VDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGA 136
+SS + N+ + + C S W VD+ EE+ +I TG GDP
Sbjct: 64 ISTPSSSEGNDVLTNTNIAITFDAPIWLCPSSKTWTVDSSSEEK---YIITG---GDP-- 115
Query: 137 KTLLNWFKFERIGTSDPATYRIV 159
K+ ++F+ E+ G TY++V
Sbjct: 116 KSGESFFRIEKYGNGK-NTYKLV 137
>pdb|2GZB|A Chain A, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
pdb|2GZB|B Chain B, Bauhinia Bauhinioides Cruzipain Inhibitor (Bbci)
Length = 166
Score = 37.4 bits (85), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 40/147 (27%), Positives = 61/147 (41%), Gaps = 15/147 (10%)
Query: 24 SRLHDINGDDV-RADQEYYVLESGNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKA 82
S + D G+ V A YY++ +G G L G+ + R G ++F+
Sbjct: 3 SVILDTKGEPVSNAADAYYLVPVSHGEGGLALAKVGNEAEPKAVVLDPHHRPGLTVRFET 62
Query: 83 YNSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLLNW 142
+ I E+ LN+KF V S SDS VW V ++ I D K+ +
Sbjct: 63 PLAIAIITESFFLNIKF--VPSSSDSEVWDVSK------QYPIGLAVKVTD--TKSFVGP 112
Query: 143 FKFERIGTSDPATYRIVYCPSVCASCL 169
F+ E+ G Y+IVY P + L
Sbjct: 113 FRVEKEGEG----YKIVYYPDRGQTGL 135
>pdb|1WBA|A Chain A, Winged Bean Albumin 1
Length = 175
Score = 33.5 bits (75), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 37/176 (21%), Positives = 76/176 (43%), Gaps = 21/176 (11%)
Query: 26 LHDINGDDVRADQEYYVLESGNGRGLTTLRHRGDSCPLDVAQVTSAPR-----TGKPLKF 80
++D G+ + +Y ++ +G G+ + G+ P D + + R T +
Sbjct: 5 VYDAEGNKLVNRGKYTIVSFSDGAGIDVVA-TGNENPEDPLSIVKSTRNIMYATSISSED 63
Query: 81 KAYNSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGKWFITTGGNEGDPGAKTLL 140
K R I E + L + F+ D VW V ++ + + + GA T+
Sbjct: 64 KTPPQPRNILENMRLKINFATDPHKGD--VWSVVDFQPDGQQLKLAGRYPNQVKGAFTI- 120
Query: 141 NWFKFERIGTSDPATYRIVYCPSVCASCLFLCQNVGVSFE-DSARRLVLKADYEPV 195
+ G++ P TY++++CP C+N+G+S + + +RLV+ +P+
Sbjct: 121 ------QKGSNTPRTYKLLFCPVGSP-----CKNIGISTDPEGKKRLVVSYQSDPL 165
>pdb|3VUS|A Chain A, Escherichia Coli Pgab N-terminal Domain
pdb|3VUS|B Chain B, Escherichia Coli Pgab N-terminal Domain
Length = 268
Score = 30.0 bits (66), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 30 NGDDVRADQEYYVLESGNGR-GLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKA 82
N +D ADQ + + + R LR G P+ +AQ+ A R GKPL KA
Sbjct: 15 NVEDEAADQRFMSVRTSALREQFAWLRENG-YQPVSIAQIREAHRGGKPLPEKA 67
>pdb|4F9D|A Chain A, Structure Of Escherichia Coli Pgab 42-655 In Complex
With Nickel
pdb|4F9D|B Chain B, Structure Of Escherichia Coli Pgab 42-655 In Complex
With Nickel
Length = 618
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 30 NGDDVRADQEYYVLESGNGR-GLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKA 82
N +D ADQ + + + R LR G P+ +AQ+ A R GKPL KA
Sbjct: 19 NVEDEAADQRFMSVRTSALREQFAWLRENG-YQPVSIAQIREAHRGGKPLPEKA 71
>pdb|4F9J|A Chain A, Structure Of Escherichia Coli Pgab 42-655 In Complex
With Iron
pdb|4F9J|B Chain B, Structure Of Escherichia Coli Pgab 42-655 In Complex
With Iron
Length = 618
Score = 29.6 bits (65), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 27/54 (50%), Gaps = 2/54 (3%)
Query: 30 NGDDVRADQEYYVLESGNGR-GLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKA 82
N +D ADQ + + + R LR G P+ +AQ+ A R GKPL KA
Sbjct: 19 NVEDEAADQRFXSVRTSALREQFAWLRENG-YQPVSIAQIREAHRGGKPLPEKA 71
>pdb|4HOJ|A Chain A, Crystal Structure Of Glutathione Transferase Homolog From
Neisseria Gonorrhoeae, Target Efi-501841, With Bound
Glutathione
Length = 210
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 30/57 (52%), Gaps = 5/57 (8%)
Query: 66 AQVTSAPRTGKPLKFKAYNSSRFIYEAVDLNVKFSIVDSCSDSLVWKVDNYDEERGK 122
A+ A G + +++ S++I L FS++D L+W++D+YD + GK
Sbjct: 121 AKAREAIGNGLTMLSPSFSKSKYI-----LGEDFSMIDVALAPLLWRLDHYDVKLGK 172
>pdb|1JKG|B Chain B, Structural Basis For The Recognition Of A Nucleoporin Fg-
Repeat By The Ntf2-Like Domain Of Tap-P15 Mrna Nuclear
Export Factor
pdb|1JN5|B Chain B, Structural Basis For The Recognition Of A Nucleoporin Fg-
Repeat By The Ntf2-Like Domain Of Tap-P15 Mrna Export
Factor
Length = 250
Score = 26.9 bits (58), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 16/66 (24%), Positives = 32/66 (48%), Gaps = 3/66 (4%)
Query: 38 QEYY-VLESGNGRGLTTLRHRGDSCPLDVAQVTSAPRTGKPLKFKAYNSSRFIYEAVDLN 96
Q+YY + +SG+ +GL H G C L + + P ++ + SR + + D
Sbjct: 23 QQYYAIYDSGDRQGLLDAYHDGACCSLSIPFIPQNPARSSLAEY--FKDSRNVKKLKDPT 80
Query: 97 VKFSIV 102
++F ++
Sbjct: 81 LRFRLL 86
>pdb|3EIF|A Chain A, 1.9 Angstrom Crystal Structure Of The Active Form Of The
C5a Peptidase From Streptococcus Pyogenes (Scpa)
Length = 936
Score = 26.9 bits (58), Expect = 7.4, Method: Composition-based stats.
Identities = 24/96 (25%), Positives = 42/96 (43%), Gaps = 16/96 (16%)
Query: 82 AYNSSRFIYEAVDLNVKFSIVDSCSDSLVW--------KVDNYDEERGKWFITTGGNEGD 133
A N ++ I +AV+L K + + +L + K +Y + +G +T+ GN+
Sbjct: 143 ARNYAQAIRDAVNLGAKVINMSFGNAALAYANLPDETKKAFDYAKSKGVSIVTSAGNDSS 202
Query: 134 PGAKTLLNWFKFERIGTSDPATYRIVYCPSVCASCL 169
G KT R+ +D Y +V P+ S L
Sbjct: 203 FGGKT--------RLPLADHPDYGVVGTPAAADSTL 230
>pdb|1RC9|A Chain A, Crystal Structure Of Stecrisp, A Member Of Crisp Family
From Trimeresurus Stejnegeri Refined At 1.6 Angstroms
Resolution: Structual Relationship Of The Two Domains
Length = 221
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 6/39 (15%)
Query: 135 GAKTLLNWFKFERIGTSDPATYRIVYCPSVCASCLFLCQ 173
G T + W+K RIG + YCPS S F+CQ
Sbjct: 114 GHYTQIVWYKSYRIGCA------AAYCPSSPYSYFFVCQ 146
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.321 0.138 0.426
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,667,152
Number of Sequences: 62578
Number of extensions: 283659
Number of successful extensions: 587
Number of sequences better than 100.0: 40
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 12
Number of HSP's that attempted gapping in prelim test: 530
Number of HSP's gapped (non-prelim): 42
length of query: 211
length of database: 14,973,337
effective HSP length: 95
effective length of query: 116
effective length of database: 9,028,427
effective search space: 1047297532
effective search space used: 1047297532
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 49 (23.5 bits)