Query 028240
Match_columns 211
No_of_seqs 125 out of 1256
Neff 8.8
Searched_HMMs 29240
Date Mon Mar 25 13:40:54 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028240.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028240hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3v0s_A Perakine reductase; AKR 100.0 1.5E-53 5E-58 359.9 20.4 202 9-210 1-203 (337)
2 3n2t_A Putative oxidoreductase 100.0 5.3E-53 1.8E-57 357.9 21.8 205 4-210 14-223 (348)
3 1pyf_A IOLS protein; beta-alph 100.0 1E-52 3.4E-57 351.4 21.2 200 9-210 1-202 (312)
4 1pz1_A GSP69, general stress p 100.0 7.3E-52 2.5E-56 349.0 20.8 200 9-210 1-202 (333)
5 3n6q_A YGHZ aldo-keto reductas 100.0 2.1E-51 7.3E-56 347.9 23.3 206 1-210 4-221 (346)
6 1ynp_A Oxidoreductase, AKR11C1 100.0 4E-51 1.4E-55 342.3 21.1 197 6-210 18-215 (317)
7 3eau_A Voltage-gated potassium 100.0 1.6E-50 5.3E-55 340.1 20.9 198 8-210 2-208 (327)
8 1ur3_M Hypothetical oxidoreduc 100.0 2.2E-50 7.7E-55 338.0 21.8 199 9-210 23-229 (319)
9 3erp_A Putative oxidoreductase 100.0 4.3E-50 1.5E-54 340.6 23.3 201 6-210 31-241 (353)
10 4exb_A Putative uncharacterize 100.0 2.4E-50 8.1E-55 334.0 19.7 197 6-210 27-234 (292)
11 3lut_A Voltage-gated potassium 100.0 3.2E-50 1.1E-54 343.1 20.8 198 7-210 36-242 (367)
12 1lqa_A TAS protein; TIM barrel 100.0 5.8E-49 2E-53 332.8 21.4 198 9-210 1-232 (346)
13 3f7j_A YVGN protein; aldo-keto 100.0 1.5E-47 5.3E-52 314.9 20.2 184 1-210 1-188 (276)
14 3ln3_A Dihydrodiol dehydrogena 100.0 2.4E-47 8.1E-52 320.4 20.9 184 7-210 4-216 (324)
15 3up8_A Putative 2,5-diketo-D-g 100.0 3.2E-47 1.1E-51 315.8 19.9 179 8-210 23-205 (298)
16 3o0k_A Aldo/keto reductase; ss 100.0 2.4E-47 8.1E-52 314.6 18.8 183 5-210 22-209 (283)
17 2wzm_A Aldo-keto reductase; ox 100.0 2E-47 6.8E-52 315.2 18.3 183 5-210 7-194 (283)
18 1hw6_A 2,5-diketo-D-gluconic a 100.0 1.5E-47 5.2E-52 315.2 16.8 180 8-210 2-186 (278)
19 1vbj_A Prostaglandin F synthas 100.0 8.3E-47 2.8E-51 311.2 19.8 181 7-210 7-191 (281)
20 1zgd_A Chalcone reductase; pol 100.0 3.1E-47 1E-51 318.2 16.9 187 1-210 1-213 (312)
21 3b3e_A YVGN protein; aldo-keto 100.0 1.3E-46 4.4E-51 313.8 20.2 180 8-210 39-222 (310)
22 1afs_A 3-alpha-HSD, 3-alpha-hy 100.0 8.5E-47 2.9E-51 316.9 18.5 184 7-210 3-215 (323)
23 3buv_A 3-OXO-5-beta-steroid 4- 100.0 1.6E-46 5.6E-51 315.5 20.0 184 8-210 6-218 (326)
24 1mi3_A Xylose reductase, XR; a 100.0 2.4E-46 8.1E-51 314.1 20.7 181 7-210 3-216 (322)
25 4f40_A Prostaglandin F2-alpha 100.0 2.1E-46 7E-51 310.0 19.4 181 8-210 9-200 (288)
26 3o3r_A Aldo-keto reductase fam 100.0 3.6E-46 1.2E-50 312.3 19.8 178 10-210 3-209 (316)
27 1s1p_A Aldo-keto reductase fam 100.0 3.9E-46 1.3E-50 313.8 19.8 184 7-210 3-215 (331)
28 1gve_A Aflatoxin B1 aldehyde r 100.0 2.4E-46 8.2E-51 314.7 18.3 181 20-210 4-192 (327)
29 2bp1_A Aflatoxin B1 aldehyde r 100.0 2.9E-46 9.8E-51 317.9 18.8 187 14-210 31-225 (360)
30 3h7u_A Aldo-keto reductase; st 100.0 2.1E-46 7.2E-51 315.8 17.7 182 6-210 22-225 (335)
31 4gie_A Prostaglandin F synthas 100.0 5.1E-46 1.7E-50 307.8 18.6 182 6-210 10-195 (290)
32 1vp5_A 2,5-diketo-D-gluconic a 100.0 8E-46 2.8E-50 307.4 19.6 176 11-210 16-199 (298)
33 1qwk_A Aldose reductase, aldo- 100.0 5.7E-46 2E-50 311.1 18.4 178 10-210 6-200 (317)
34 1us0_A Aldose reductase; oxido 100.0 1.7E-45 5.7E-50 308.2 20.0 178 10-210 3-209 (316)
35 1mzr_A 2,5-diketo-D-gluconate 100.0 1.2E-45 4.3E-50 306.0 18.8 178 8-210 24-206 (296)
36 3h7r_A Aldo-keto reductase; st 100.0 1.1E-45 3.8E-50 310.9 16.2 178 6-210 22-221 (331)
37 3krb_A Aldose reductase; ssgci 100.0 7.7E-45 2.6E-49 306.2 19.0 177 12-210 16-223 (334)
38 3b3d_A YTBE protein, putative 100.0 2E-44 7E-49 301.3 18.5 180 10-210 41-226 (314)
39 2bgs_A Aldose reductase; holoe 100.0 2.7E-44 9.2E-49 303.7 18.6 178 9-210 36-237 (344)
40 4gac_A Alcohol dehydrogenase [ 100.0 6.2E-43 2.1E-47 293.4 18.8 178 10-210 3-208 (324)
41 3cf4_A Acetyl-COA decarboxylas 97.6 1.8E-05 6.3E-10 73.1 2.3 91 115-211 231-342 (807)
42 1mdl_A Mandelate racemase; iso 94.5 1.2 4E-05 36.9 13.9 147 40-209 144-295 (359)
43 2ovl_A Putative racemase; stru 94.5 1.5 5.1E-05 36.5 14.6 149 40-209 146-297 (371)
44 2pgw_A Muconate cycloisomerase 93.8 2.2 7.6E-05 35.6 14.2 148 40-209 147-296 (384)
45 2o56_A Putative mandelate race 93.4 2.9 0.0001 35.1 14.5 151 39-209 151-321 (407)
46 2qgy_A Enolase from the enviro 93.0 3.6 0.00012 34.4 14.6 149 40-209 149-300 (391)
47 2nql_A AGR_PAT_674P, isomerase 92.9 2.6 9E-05 35.2 13.4 146 40-209 164-313 (388)
48 2og9_A Mandelate racemase/muco 92.8 2.1 7.3E-05 35.8 12.7 149 40-209 162-313 (393)
49 2rdx_A Mandelate racemase/muco 92.6 2.5 8.5E-05 35.2 12.7 146 40-209 145-292 (379)
50 2zad_A Muconate cycloisomerase 92.6 1.6 5.4E-05 35.9 11.3 148 40-209 139-289 (345)
51 2gl5_A Putative dehydratase pr 92.5 4.2 0.00014 34.2 14.6 151 39-209 149-324 (410)
52 3tj4_A Mandelate racemase; eno 92.0 4.6 0.00016 33.6 13.6 150 40-209 151-303 (372)
53 2pp0_A L-talarate/galactarate 91.8 3.3 0.00011 34.7 12.7 147 40-209 175-326 (398)
54 2oz8_A MLL7089 protein; struct 91.7 5.2 0.00018 33.4 16.5 145 40-209 145-294 (389)
55 1rvk_A Isomerase/lactonizing e 91.7 4.8 0.00017 33.4 13.5 151 39-209 148-307 (382)
56 2ox4_A Putative mandelate race 91.2 4 0.00014 34.2 12.6 150 39-209 145-315 (403)
57 1tzz_A Hypothetical protein L1 90.8 6.4 0.00022 32.9 13.4 147 40-207 165-318 (392)
58 2poz_A Putative dehydratase; o 90.7 6.5 0.00022 32.8 13.8 150 39-209 136-305 (392)
59 3bjs_A Mandelate racemase/muco 90.7 3.9 0.00013 34.7 12.1 147 42-209 187-336 (428)
60 3ozy_A Putative mandelate race 90.6 6.7 0.00023 32.8 13.7 149 40-209 151-302 (389)
61 3gd6_A Muconate cycloisomerase 90.6 3.3 0.00011 34.7 11.4 150 40-209 142-293 (391)
62 2hxt_A L-fuconate dehydratase; 90.4 5.2 0.00018 34.0 12.7 150 39-209 197-349 (441)
63 1nu5_A Chloromuconate cycloiso 90.2 5.7 0.00019 32.8 12.5 148 40-209 142-294 (370)
64 2qde_A Mandelate racemase/muco 90.0 3 0.0001 35.0 10.7 149 40-209 145-295 (397)
65 2qq6_A Mandelate racemase/muco 89.9 6.4 0.00022 33.1 12.7 149 40-209 149-316 (410)
66 3dg3_A Muconate cycloisomerase 89.6 7.6 0.00026 32.1 12.8 148 40-209 139-290 (367)
67 1tkk_A Similar to chloromucona 89.5 5 0.00017 33.1 11.6 149 40-209 140-293 (366)
68 1r0m_A N-acylamino acid racema 89.5 8 0.00028 32.0 14.5 145 40-209 148-294 (375)
69 2zc8_A N-acylamino acid racema 89.4 8.1 0.00028 31.9 13.2 144 40-209 141-287 (369)
70 2hzg_A Mandelate racemase/muco 89.0 6.7 0.00023 32.8 12.1 150 40-209 145-302 (401)
71 1sjd_A N-acylamino acid racema 88.8 8.9 0.0003 31.6 14.1 146 40-209 141-288 (368)
72 3stp_A Galactonate dehydratase 88.6 8.6 0.00029 32.5 12.5 150 40-209 179-336 (412)
73 2p8b_A Mandelate racemase/muco 88.6 6.6 0.00022 32.4 11.7 149 40-209 141-292 (369)
74 3eez_A Putative mandelate race 87.7 8.6 0.00029 32.0 11.9 146 40-209 145-292 (378)
75 3mwc_A Mandelate racemase/muco 87.5 12 0.0004 31.5 12.8 143 41-209 164-310 (400)
76 3rr1_A GALD, putative D-galact 87.4 12 0.00041 31.5 14.9 148 39-209 124-284 (405)
77 2qdd_A Mandelate racemase/muco 87.2 9.5 0.00033 31.6 11.9 145 40-209 145-292 (378)
78 2gdq_A YITF; mandelate racemas 87.1 6.6 0.00023 32.7 10.9 148 42-209 141-291 (382)
79 3jva_A Dipeptide epimerase; en 86.9 12 0.0004 30.8 13.2 149 40-209 139-289 (354)
80 3q45_A Mandelate racemase/muco 86.6 10 0.00036 31.3 11.7 149 40-209 140-290 (368)
81 3i4k_A Muconate lactonizing en 86.5 13 0.00045 30.9 15.4 150 40-209 148-300 (383)
82 1ydn_A Hydroxymethylglutaryl-C 86.4 2.4 8.3E-05 34.0 7.5 101 106-209 23-137 (295)
83 3i6e_A Muconate cycloisomerase 86.3 12 0.00042 31.1 12.1 149 40-209 148-298 (385)
84 2ps2_A Putative mandelate race 86.0 7.7 0.00026 32.0 10.6 146 40-209 146-294 (371)
85 3sjn_A Mandelate racemase/muco 85.1 12 0.00042 30.9 11.5 148 41-209 147-300 (374)
86 3ddm_A Putative mandelate race 84.4 6.6 0.00023 32.9 9.5 148 42-209 157-306 (392)
87 3toy_A Mandelate racemase/muco 84.3 17 0.00058 30.3 13.9 150 40-209 167-319 (383)
88 4dwd_A Mandelate racemase/muco 83.7 18 0.00062 30.2 12.8 149 40-209 139-296 (393)
89 3p3b_A Mandelate racemase/muco 83.6 7 0.00024 32.6 9.4 144 42-209 150-309 (392)
90 3ik4_A Mandelate racemase/muco 83.5 18 0.0006 29.9 14.1 148 40-209 143-294 (365)
91 1kko_A 3-methylaspartate ammon 82.4 16 0.00055 30.7 11.2 100 107-209 250-356 (413)
92 4dye_A Isomerase; enolase fami 82.0 16 0.00055 30.6 11.0 146 40-209 168-316 (398)
93 1z41_A YQJM, probable NADH-dep 81.9 20 0.00067 29.3 13.0 136 43-184 145-306 (338)
94 4h83_A Mandelate racemase/muco 81.2 10 0.00035 31.6 9.5 171 11-209 142-316 (388)
95 3fv9_G Mandelate racemase/muco 81.1 23 0.00077 29.5 12.1 148 40-209 145-298 (386)
96 3my9_A Muconate cycloisomerase 80.7 13 0.00043 30.9 9.8 150 40-209 146-297 (377)
97 4a35_A Mitochondrial enolase s 80.6 26 0.00088 29.8 13.0 150 39-209 200-354 (441)
98 2ftp_A Hydroxymethylglutaryl-C 80.3 4.4 0.00015 32.7 6.7 101 106-209 27-141 (302)
99 4e5t_A Mandelate racemase / mu 79.7 26 0.00089 29.3 13.5 150 40-209 151-314 (404)
100 3u9i_A Mandelate racemase/muco 79.2 13 0.00045 31.1 9.5 148 40-209 165-324 (393)
101 2akz_A Gamma enolase, neural; 78.8 18 0.00061 30.8 10.3 95 106-209 270-367 (439)
102 3ugv_A Enolase; enzyme functio 78.7 24 0.00084 29.3 11.0 150 40-209 171-325 (390)
103 1nsj_A PRAI, phosphoribosyl an 78.6 6.8 0.00023 29.8 6.9 64 120-186 19-84 (205)
104 3go2_A Putative L-alanine-DL-g 78.5 29 0.00098 29.1 11.5 146 39-209 142-316 (409)
105 3rcy_A Mandelate racemase/muco 78.1 31 0.001 29.2 14.0 150 40-209 146-309 (433)
106 2gou_A Oxidoreductase, FMN-bin 77.6 29 0.00098 28.7 11.6 67 113-184 253-321 (365)
107 3ro6_B Putative chloromuconate 77.6 19 0.00065 29.5 10.0 149 40-209 140-291 (356)
108 1nvm_A HOA, 4-hydroxy-2-oxoval 77.5 5.3 0.00018 32.9 6.5 103 106-210 27-138 (345)
109 3s5s_A Mandelate racemase/muco 77.2 30 0.001 28.7 14.8 147 40-209 144-295 (389)
110 3qld_A Mandelate racemase/muco 77.1 31 0.001 28.7 12.5 144 40-209 149-295 (388)
111 3r0u_A Enzyme of enolase super 76.2 32 0.0011 28.5 15.4 151 40-209 142-294 (379)
112 3r4e_A Mandelate racemase/muco 76.1 34 0.0012 28.8 11.2 150 40-209 143-326 (418)
113 1f6y_A 5-methyltetrahydrofolat 76.0 27 0.00092 27.5 10.0 98 107-211 23-122 (262)
114 4e8g_A Enolase, mandelate race 75.9 24 0.00082 29.4 10.2 147 40-209 164-313 (391)
115 3hgj_A Chromate reductase; TIM 75.4 32 0.0011 28.1 12.3 133 46-184 156-317 (349)
116 1ps9_A 2,4-dienoyl-COA reducta 75.3 29 0.001 30.9 11.2 135 43-184 142-309 (671)
117 2yci_X 5-methyltetrahydrofolat 75.2 21 0.00073 28.3 9.2 97 107-211 32-131 (271)
118 3qtp_A Enolase 1; glycolysis, 75.0 36 0.0012 29.0 11.0 95 106-209 279-377 (441)
119 3t6c_A RSPA, putative MAND fam 74.9 38 0.0013 28.7 12.4 84 117-209 261-346 (440)
120 4hnl_A Mandelate racemase/muco 73.8 22 0.00074 29.9 9.4 150 40-209 153-327 (421)
121 3vdg_A Probable glucarate dehy 73.5 30 0.001 29.5 10.3 146 39-209 192-341 (445)
122 1v5x_A PRA isomerase, phosphor 73.1 10 0.00036 28.7 6.6 65 120-187 18-84 (203)
123 3va8_A Probable dehydratase; e 73.0 31 0.001 29.4 10.3 146 39-209 190-339 (445)
124 3mzn_A Glucarate dehydratase; 72.2 21 0.00072 30.4 9.1 153 39-209 181-335 (450)
125 4g8t_A Glucarate dehydratase; 72.2 16 0.00055 31.3 8.3 87 118-209 266-355 (464)
126 3pfr_A Mandelate racemase/muco 71.8 25 0.00085 30.1 9.4 152 39-209 184-338 (455)
127 2r14_A Morphinone reductase; H 71.2 43 0.0015 27.8 11.5 135 42-184 166-327 (377)
128 1aj0_A DHPS, dihydropteroate s 71.2 35 0.0012 27.2 9.6 96 108-211 37-139 (282)
129 1eye_A DHPS 1, dihydropteroate 71.2 37 0.0013 27.0 10.1 98 107-211 27-130 (280)
130 1tx2_A DHPS, dihydropteroate s 71.1 14 0.00049 29.7 7.3 96 109-211 63-165 (297)
131 3p0w_A Mandelate racemase/muco 70.8 26 0.00088 30.1 9.3 151 39-209 199-353 (470)
132 1vyr_A Pentaerythritol tetrani 70.7 43 0.0015 27.6 12.5 68 114-184 255-322 (364)
133 1ydo_A HMG-COA lyase; TIM-barr 70.3 9.8 0.00034 30.8 6.3 101 106-209 25-139 (307)
134 3vc5_A Mandelate racemase/muco 70.2 31 0.0011 29.3 9.6 146 39-209 187-336 (441)
135 3tji_A Mandelate racemase/muco 70.0 38 0.0013 28.6 10.1 150 40-209 154-328 (422)
136 3sbf_A Mandelate racemase / mu 69.2 49 0.0017 27.5 13.6 150 40-209 133-307 (401)
137 3k13_A 5-methyltetrahydrofolat 68.5 41 0.0014 27.1 9.5 99 107-211 35-139 (300)
138 4hpn_A Putative uncharacterize 67.7 50 0.0017 27.1 12.8 144 41-209 145-294 (378)
139 1icp_A OPR1, 12-oxophytodienoa 67.2 53 0.0018 27.2 10.7 135 42-184 167-329 (376)
140 3gr7_A NADPH dehydrogenase; fl 66.9 51 0.0017 26.9 11.9 95 85-184 209-306 (340)
141 1vpq_A Hypothetical protein TM 66.5 39 0.0013 26.7 9.0 136 21-163 13-157 (273)
142 4e4u_A Mandalate racemase/muco 66.4 57 0.002 27.3 15.8 150 40-209 144-307 (412)
143 3l5a_A NADH/flavin oxidoreduct 66.2 50 0.0017 27.9 10.0 97 83-184 240-345 (419)
144 2al1_A Enolase 1, 2-phospho-D- 65.1 48 0.0017 28.1 9.8 95 106-209 273-370 (436)
145 2cw6_A Hydroxymethylglutaryl-C 64.4 10 0.00035 30.4 5.2 101 106-209 24-138 (298)
146 3mkc_A Racemase; metabolic pro 64.1 62 0.0021 26.9 13.8 147 43-209 160-312 (394)
147 1ydo_A HMG-COA lyase; TIM-barr 63.2 51 0.0017 26.5 9.2 26 38-63 24-49 (307)
148 2uyg_A 3-dehydroquinate dehydr 62.7 20 0.00069 25.8 5.9 81 105-192 23-106 (149)
149 3vcn_A Mannonate dehydratase; 62.5 69 0.0024 26.9 12.8 149 40-209 150-333 (425)
150 1olt_A Oxygen-independent copr 62.4 21 0.00072 30.3 7.1 58 107-166 218-291 (457)
151 2ptz_A Enolase; lyase, glycoly 62.3 67 0.0023 27.1 10.2 94 107-209 273-371 (432)
152 2chr_A Chloromuconate cycloiso 61.9 64 0.0022 26.3 11.1 148 40-209 143-294 (370)
153 1wuf_A Hypothetical protein LI 60.8 70 0.0024 26.4 13.2 145 40-209 161-307 (393)
154 4h1z_A Enolase Q92ZS5; dehydra 60.7 73 0.0025 26.6 14.9 147 40-209 188-337 (412)
155 2xvc_A ESCRT-III, SSO0910; cel 60.6 7.6 0.00026 23.2 2.7 22 138-159 36-57 (59)
156 2c4w_A 3-dehydroquinate dehydr 60.5 30 0.001 25.6 6.5 81 105-192 33-118 (176)
157 3k30_A Histamine dehydrogenase 60.0 61 0.0021 29.0 10.0 130 44-183 158-322 (690)
158 1kcz_A Beta-methylaspartase; b 59.8 49 0.0017 27.6 8.9 79 131-209 271-356 (413)
159 3l5l_A Xenobiotic reductase A; 59.7 72 0.0025 26.2 12.9 142 38-184 147-324 (363)
160 2ozt_A TLR1174 protein; struct 59.7 68 0.0023 25.9 12.4 147 41-209 117-269 (332)
161 3v3w_A Starvation sensing prot 59.6 78 0.0027 26.6 13.1 150 40-209 149-332 (424)
162 3mqt_A Mandelate racemase/muco 59.5 75 0.0026 26.3 13.1 146 43-209 155-307 (394)
163 3aty_A Tcoye, prostaglandin F2 59.0 77 0.0026 26.3 12.4 127 46-184 178-335 (379)
164 2dqw_A Dihydropteroate synthas 58.3 31 0.0011 27.7 7.0 84 121-211 63-152 (294)
165 3fcp_A L-Ala-D/L-Glu epimerase 57.6 79 0.0027 26.0 11.2 150 40-209 147-299 (381)
166 3uj2_A Enolase 1; enzyme funct 57.6 59 0.002 27.7 9.0 127 74-209 246-388 (449)
167 3dxi_A Putative aldolase; TIM 57.5 68 0.0023 26.0 9.0 104 106-210 21-132 (320)
168 4djd_D C/Fe-SP, corrinoid/iron 57.1 45 0.0015 27.2 7.8 95 111-211 82-186 (323)
169 2h9a_B CO dehydrogenase/acetyl 56.5 46 0.0016 26.9 7.8 93 111-211 76-179 (310)
170 1h05_A 3-dehydroquinate dehydr 56.3 40 0.0014 24.1 6.5 79 106-191 27-107 (146)
171 3ngj_A Deoxyribose-phosphate a 55.3 9.9 0.00034 29.7 3.4 28 40-67 155-182 (239)
172 3ekg_A Mandelate racemase/muco 55.1 42 0.0014 28.2 7.6 65 145-209 250-318 (404)
173 1vd6_A Glycerophosphoryl diest 55.0 65 0.0022 24.2 10.1 144 41-210 21-191 (224)
174 3rmj_A 2-isopropylmalate synth 54.4 66 0.0022 26.6 8.6 26 38-63 30-55 (370)
175 2y5s_A DHPS, dihydropteroate s 54.3 82 0.0028 25.2 9.3 97 107-211 44-146 (294)
176 1wa3_A 2-keto-3-deoxy-6-phosph 54.1 39 0.0013 24.9 6.7 89 107-210 20-109 (205)
177 3dgb_A Muconate cycloisomerase 53.7 93 0.0032 25.6 11.5 149 41-209 149-300 (382)
178 2vp8_A Dihydropteroate synthas 53.6 33 0.0011 27.9 6.4 96 108-211 64-166 (318)
179 3kru_A NADH:flavin oxidoreduct 52.9 93 0.0032 25.4 12.1 137 39-184 133-306 (343)
180 2fym_A Enolase; RNA degradosom 52.4 1E+02 0.0036 25.8 10.3 94 107-209 268-366 (431)
181 2vef_A Dihydropteroate synthas 51.3 95 0.0033 25.0 9.6 95 111-211 32-135 (314)
182 3noy_A 4-hydroxy-3-methylbut-2 51.1 54 0.0019 27.2 7.3 93 107-208 44-136 (366)
183 2pa6_A Enolase; glycolysis, ly 50.5 1.1E+02 0.0037 25.7 9.5 94 107-209 268-364 (427)
184 3tcs_A Racemase, putative; PSI 50.3 1.1E+02 0.0037 25.4 12.6 148 41-209 148-305 (388)
185 3ktc_A Xylose isomerase; putat 48.6 9.2 0.00031 30.8 2.4 60 21-80 7-72 (333)
186 1pii_A N-(5'phosphoribosyl)ant 48.5 40 0.0014 28.8 6.4 64 120-187 272-336 (452)
187 2q5c_A NTRC family transcripti 48.1 56 0.0019 24.2 6.6 65 140-209 79-146 (196)
188 3dip_A Enolase; structural gen 47.7 1.2E+02 0.0041 25.2 9.4 84 117-209 234-320 (410)
189 1gqo_A Dehydroquinase; dehydra 47.3 35 0.0012 24.3 5.0 81 105-192 24-106 (143)
190 1chr_A Chloromuconate cycloiso 46.4 1.2E+02 0.0041 24.8 14.5 77 129-209 216-294 (370)
191 3tqp_A Enolase; energy metabol 46.2 1.3E+02 0.0046 25.3 11.8 127 74-209 224-362 (428)
192 1wue_A Mandelate racemase/muco 46.1 1.2E+02 0.0042 24.8 10.9 144 40-209 161-307 (386)
193 3tr9_A Dihydropteroate synthas 45.9 1.2E+02 0.004 24.6 10.2 98 107-211 47-154 (314)
194 3n8k_A 3-dehydroquinate dehydr 45.7 85 0.0029 23.0 6.9 80 105-191 52-133 (172)
195 3v5c_A Mandelate racemase/muco 45.5 56 0.0019 27.1 6.9 75 127-209 227-309 (392)
196 2xsa_A Ogoga, hyaluronoglucosa 45.1 65 0.0022 27.5 7.1 99 34-163 9-113 (447)
197 1t57_A Conserved protein MTH16 44.7 92 0.0031 23.5 7.1 79 129-209 25-109 (206)
198 3otr_A Enolase; structural gen 43.3 1.6E+02 0.0053 25.2 10.2 95 106-209 281-380 (452)
199 1q7z_A 5-methyltetrahydrofolat 42.8 85 0.0029 27.6 7.8 161 40-211 250-437 (566)
200 1y80_A Predicted cobalamin bin 42.7 92 0.0031 23.1 7.2 22 40-61 15-36 (210)
201 3g8r_A Probable spore coat pol 42.4 1.4E+02 0.0047 24.6 8.6 128 39-188 75-228 (350)
202 3ble_A Citramalate synthase fr 41.7 99 0.0034 25.1 7.7 95 106-209 38-154 (337)
203 3iix_A Biotin synthetase, puta 41.6 73 0.0025 25.4 6.9 119 39-174 84-214 (348)
204 1wv2_A Thiazole moeity, thiazo 41.5 1.3E+02 0.0044 23.7 10.6 104 105-210 83-192 (265)
205 1w6t_A Enolase; bacterial infe 41.5 1.3E+02 0.0046 25.3 8.7 95 106-209 279-378 (444)
206 1o94_A Tmadh, trimethylamine d 41.5 2E+02 0.0067 25.9 11.5 135 43-184 150-320 (729)
207 1vp8_A Hypothetical protein AF 39.9 95 0.0033 23.4 6.5 67 142-209 29-102 (201)
208 2wqp_A Polysialic acid capsule 38.9 1.5E+02 0.0051 24.3 8.3 128 39-188 88-239 (349)
209 2ab1_A Hypothetical protein; H 38.4 61 0.0021 22.2 5.1 46 165-211 49-95 (122)
210 3gka_A N-ethylmaleimide reduct 38.4 1.6E+02 0.0056 24.1 11.7 63 113-184 253-315 (361)
211 2p3z_A L-rhamnonate dehydratas 38.2 1E+02 0.0035 25.8 7.4 77 128-209 249-329 (415)
212 1gtz_A 3-dehydroquinate dehydr 37.4 49 0.0017 23.9 4.5 81 105-192 30-113 (156)
213 4dxk_A Mandelate racemase / mu 37.4 1E+02 0.0036 25.5 7.3 84 117-209 231-316 (400)
214 2pge_A MENC; OSBS, NYSGXRC, PS 37.1 1.3E+02 0.0044 24.6 7.7 148 40-209 162-316 (377)
215 1gk8_I Ribulose bisphosphate c 36.8 1.1E+02 0.0038 21.6 6.5 97 25-133 11-111 (140)
216 3cpk_A Uncharacterized protein 36.7 72 0.0024 22.9 5.3 34 178-211 88-121 (150)
217 3qn3_A Enolase; structural gen 36.6 1.9E+02 0.0065 24.3 9.0 130 71-209 221-360 (417)
218 3ndo_A Deoxyribose-phosphate a 36.2 50 0.0017 25.5 4.7 27 40-66 144-170 (231)
219 3s83_A Ggdef family protein; s 36.2 83 0.0029 23.9 6.2 97 110-210 106-214 (259)
220 2fkn_A Urocanate hydratase; ro 36.0 1.1E+02 0.0038 26.6 7.1 125 48-186 114-263 (552)
221 1p1x_A Deoxyribose-phosphate a 35.6 1.6E+02 0.0054 23.1 8.9 77 40-127 148-229 (260)
222 1ep3_A Dihydroorotate dehydrog 35.5 73 0.0025 25.0 5.9 151 40-206 109-296 (311)
223 1x87_A Urocanase protein; stru 35.2 1.1E+02 0.0038 26.5 7.0 91 82-186 160-262 (551)
224 2ph5_A Homospermidine synthase 35.0 18 0.00063 31.2 2.2 22 42-63 94-115 (480)
225 3cyj_A Mandelate racemase/muco 34.3 1.9E+02 0.0064 23.5 14.8 148 40-209 144-295 (372)
226 3jx9_A Putative phosphoheptose 34.3 1.3E+02 0.0045 21.8 6.6 89 41-164 24-112 (170)
227 2oda_A Hypothetical protein ps 33.8 94 0.0032 22.6 5.9 34 141-175 38-71 (196)
228 3eeg_A 2-isopropylmalate synth 33.7 1.9E+02 0.0064 23.3 8.5 90 114-209 32-139 (325)
229 4h3d_A 3-dehydroquinate dehydr 33.4 1.7E+02 0.0057 22.7 16.4 109 7-131 8-121 (258)
230 3fst_A 5,10-methylenetetrahydr 33.3 1.9E+02 0.0063 23.2 9.6 146 44-207 41-204 (304)
231 3sma_A FRBF; N-acetyl transfer 33.2 68 0.0023 25.7 5.1 53 111-163 23-81 (286)
232 2pju_A Propionate catabolism o 33.1 45 0.0016 25.5 4.0 64 141-209 92-158 (225)
233 1qwg_A PSL synthase;, (2R)-pho 32.9 1.8E+02 0.006 22.8 7.6 97 113-210 26-132 (251)
234 3vni_A Xylose isomerase domain 32.7 1.1E+02 0.0037 23.5 6.4 36 23-63 3-38 (294)
235 2wje_A CPS4B, tyrosine-protein 32.5 1.6E+02 0.0055 22.2 11.6 156 39-209 21-199 (247)
236 3r12_A Deoxyribose-phosphate a 32.0 62 0.0021 25.5 4.7 29 40-68 171-199 (260)
237 1uwk_A Urocanate hydratase; hy 31.5 1.1E+02 0.0038 26.6 6.4 125 48-186 118-267 (557)
238 3bfj_A 1,3-propanediol oxidore 31.2 1.7E+02 0.0058 23.9 7.6 95 65-175 16-112 (387)
239 3ijw_A Aminoglycoside N3-acety 31.0 49 0.0017 26.2 3.9 52 112-163 17-74 (268)
240 3mcm_A 2-amino-4-hydroxy-6-hyd 30.7 1.6E+02 0.0056 25.0 7.4 100 107-211 210-321 (442)
241 3eeg_A 2-isopropylmalate synth 30.6 2.1E+02 0.0072 23.0 9.2 25 39-63 25-49 (325)
242 2p0o_A Hypothetical protein DU 30.5 1.9E+02 0.0067 23.9 7.7 145 40-211 15-177 (372)
243 3dc8_A Dihydropyrimidinase; TI 30.2 2.5E+02 0.0086 23.7 9.7 111 40-160 68-179 (490)
244 2okt_A OSB synthetase, O-succi 30.0 2.1E+02 0.0073 22.9 8.8 78 127-209 191-269 (342)
245 2nx9_A Oxaloacetate decarboxyl 29.7 1.8E+02 0.0062 24.8 7.6 89 117-209 37-144 (464)
246 3fxg_A Rhamnonate dehydratase; 29.7 46 0.0016 28.5 3.8 66 144-209 255-323 (455)
247 1m65_A Hypothetical protein YC 29.5 1.7E+02 0.006 21.7 9.0 149 45-210 21-189 (245)
248 3lab_A Putative KDPG (2-keto-3 29.1 96 0.0033 23.6 5.2 76 115-206 30-107 (217)
249 2i2x_B MTAC, methyltransferase 28.8 1.7E+02 0.0058 22.5 6.8 57 149-206 145-203 (258)
250 3n9r_A Fructose-bisphosphate a 28.5 57 0.0019 26.4 4.0 32 179-210 98-133 (307)
251 3lte_A Response regulator; str 28.0 81 0.0028 20.4 4.3 60 125-187 49-111 (132)
252 4ab4_A Xenobiotic reductase B; 28.0 2.5E+02 0.0085 23.0 11.8 63 112-183 244-306 (362)
253 4a3u_A NCR, NADH\:flavin oxido 27.4 2.5E+02 0.0085 22.8 9.5 23 108-130 239-261 (358)
254 3qc0_A Sugar isomerase; TIM ba 26.7 63 0.0021 24.5 3.9 36 21-63 4-39 (275)
255 2nyg_A YOKD protein; PFAM02522 26.5 71 0.0024 25.3 4.2 52 112-163 15-72 (273)
256 1vpy_A Protein (hypothetical p 26.4 2.4E+02 0.0082 22.3 13.1 124 21-153 13-140 (289)
257 1mzh_A Deoxyribose-phosphate a 26.3 80 0.0027 23.9 4.4 26 40-65 130-155 (225)
258 3ox4_A Alcohol dehydrogenase 2 26.0 2.5E+02 0.0085 23.0 7.7 94 65-174 14-107 (383)
259 3uhj_A Probable glycerol dehyd 26.0 2.1E+02 0.0071 23.6 7.2 103 65-187 36-139 (387)
260 2q02_A Putative cytoplasmic pr 25.9 79 0.0027 23.9 4.4 63 146-209 23-102 (272)
261 4e4f_A Mannonate dehydratase; 25.8 2.9E+02 0.0099 23.0 10.8 93 107-209 240-334 (426)
262 3l23_A Sugar phosphate isomera 25.3 2.4E+02 0.0082 21.9 8.5 52 23-80 14-70 (303)
263 3kip_A 3-dehydroquinase, type 25.1 1.4E+02 0.0048 21.8 5.1 80 105-191 38-122 (167)
264 1gvf_A Tagatose-bisphosphate a 25.0 84 0.0029 25.1 4.4 119 45-210 7-133 (286)
265 2a4a_A Deoxyribose-phosphate a 24.9 2.6E+02 0.0089 22.1 7.3 78 40-128 170-257 (281)
266 3nhm_A Response regulator; pro 24.8 87 0.003 20.3 4.0 60 125-187 46-108 (133)
267 2z61_A Probable aspartate amin 24.7 2.5E+02 0.0087 22.0 11.0 133 41-209 44-187 (370)
268 3oa3_A Aldolase; structural ge 24.6 1E+02 0.0034 24.7 4.7 28 40-67 186-213 (288)
269 3qxb_A Putative xylose isomera 24.3 77 0.0026 24.9 4.1 39 172-210 42-88 (316)
270 3u80_A 3-dehydroquinate dehydr 24.1 1.9E+02 0.0065 20.7 5.6 78 107-191 30-112 (151)
271 1n7k_A Deoxyribose-phosphate a 24.1 2E+02 0.0067 22.1 6.2 33 40-72 146-180 (234)
272 3ghf_A Septum site-determining 23.8 1.7E+02 0.0059 19.7 6.2 31 122-154 10-40 (120)
273 4e38_A Keto-hydroxyglutarate-a 23.6 2E+02 0.0068 22.0 6.2 57 144-209 72-131 (232)
274 2zvr_A Uncharacterized protein 23.5 57 0.002 25.2 3.2 12 197-208 73-84 (290)
275 3qy7_A Tyrosine-protein phosph 23.4 96 0.0033 24.1 4.4 157 38-208 16-189 (262)
276 3ftb_A Histidinol-phosphate am 23.4 2.6E+02 0.009 21.7 11.9 85 114-209 90-181 (361)
277 3apt_A Methylenetetrahydrofola 23.0 2.9E+02 0.0098 22.0 10.6 146 44-207 31-201 (310)
278 3vnd_A TSA, tryptophan synthas 23.0 2.7E+02 0.0093 21.7 7.6 66 142-209 80-152 (267)
279 3o9z_A Lipopolysaccaride biosy 22.7 2E+02 0.0069 22.6 6.4 60 107-175 55-117 (312)
280 1ub3_A Aldolase protein; schif 22.6 2.5E+02 0.0086 21.2 10.1 133 38-186 15-154 (220)
281 3v7e_A Ribosome-associated pro 22.5 1.5E+02 0.005 18.5 5.1 15 195-209 43-57 (82)
282 2w6k_A COBE; biosynthetic prot 22.3 1.3E+02 0.0046 21.1 4.6 46 106-151 22-67 (145)
283 3fvs_A Kynurenine--oxoglutarat 22.3 3E+02 0.01 22.0 10.5 140 40-209 42-211 (422)
284 1itu_A Renal dipeptidase; glyc 22.3 2.1E+02 0.0072 23.6 6.4 110 42-164 178-287 (369)
285 4ggi_A UDP-2,3-diacylglucosami 22.3 97 0.0033 24.5 4.3 43 167-211 234-277 (283)
286 2q3l_A Uncharacterized protein 22.2 1.9E+02 0.0064 19.5 5.7 61 108-168 35-96 (126)
287 1uqr_A 3-dehydroquinate dehydr 22.1 44 0.0015 24.1 2.0 80 105-191 25-106 (154)
288 2hsa_B 12-oxophytodienoate red 22.1 3.4E+02 0.012 22.5 14.6 135 42-184 171-347 (402)
289 1t57_A Conserved protein MTH16 22.0 1.3E+02 0.0044 22.7 4.6 71 40-124 36-106 (206)
290 1ub3_A Aldolase protein; schif 21.9 1.7E+02 0.0059 22.1 5.5 28 40-67 131-158 (220)
291 1vp8_A Hypothetical protein AF 21.9 1.1E+02 0.0037 23.1 4.1 71 40-124 28-99 (201)
292 3kht_A Response regulator; PSI 21.8 1.8E+02 0.006 19.1 5.7 65 119-186 44-112 (144)
293 2gax_A Hypothetical protein AT 21.8 1.6E+02 0.0055 20.4 4.9 49 40-88 64-112 (135)
294 2b0l_A GTP-sensing transcripti 21.7 1.6E+02 0.0056 19.1 4.7 36 140-175 56-98 (102)
295 2oqx_A Tryptophanase; lyase, p 21.5 1E+02 0.0035 25.4 4.5 45 166-210 168-222 (467)
296 3ec1_A YQEH GTPase; atnos1, at 21.4 3.3E+02 0.011 22.1 10.0 119 40-170 57-178 (369)
297 4eiv_A Deoxyribose-phosphate a 21.4 2E+02 0.0068 23.1 5.8 40 40-79 164-207 (297)
298 2r6o_A Putative diguanylate cy 21.3 3E+02 0.01 21.5 7.5 98 108-210 128-238 (294)
299 3l8h_A Putative haloacid dehal 21.2 1.3E+02 0.0045 20.9 4.6 16 141-156 29-44 (179)
300 3lwz_A 3-dehydroquinate dehydr 21.2 96 0.0033 22.3 3.6 78 105-191 31-112 (153)
301 3rys_A Adenosine deaminase 1; 21.2 3.3E+02 0.011 22.0 12.4 154 44-209 83-245 (343)
302 2gwg_A 4-oxalomesaconate hydra 21.1 3.1E+02 0.011 21.7 8.4 66 144-209 92-176 (350)
303 3lmz_A Putative sugar isomeras 21.1 1.2E+02 0.0039 22.9 4.4 15 195-209 92-106 (257)
304 2cw6_A Hydroxymethylglutaryl-C 20.9 3E+02 0.01 21.5 10.1 26 38-63 23-48 (298)
305 3sfw_A Dihydropyrimidinase; hy 20.6 3.6E+02 0.012 22.2 9.9 109 42-161 72-183 (461)
306 2olj_A Amino acid ABC transpor 20.4 3E+02 0.01 21.2 9.1 47 126-174 177-226 (263)
307 1vlj_A NADH-dependent butanol 20.3 3.1E+02 0.011 22.6 7.3 95 65-175 26-121 (407)
308 3rmj_A 2-isopropylmalate synth 20.1 2.3E+02 0.0077 23.3 6.2 56 37-92 152-211 (370)
309 3en0_A Cyanophycinase; serine 20.1 1.2E+02 0.0042 24.1 4.5 57 108-164 69-153 (291)
310 1vi6_A 30S ribosomal protein S 20.1 92 0.0032 23.6 3.5 22 190-211 123-144 (208)
311 4h62_V Mediator of RNA polymer 20.0 52 0.0018 16.2 1.4 17 160-176 4-20 (31)
No 1
>3v0s_A Perakine reductase; AKR superfamily, oxidoreductase; HET: MLZ M3L MLY ATR; 1.77A {Rauvolfia serpentina} PDB: 3v0u_A 3v0t_A* 3uyi_A*
Probab=100.00 E-value=1.5e-53 Score=359.94 Aligned_cols=202 Identities=71% Similarity=1.185 Sum_probs=181.2
Q ss_pred CCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEE
Q 028240 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQ 87 (211)
Q Consensus 9 ~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~ 87 (211)
|+|++||++|++||+||||||++|+.|+...+++++.++|++|++.||||||||+.||. |.+|+.+|++|++.+|++++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~G~sE~~lG~al~~~~R~~~~ 80 (337)
T 3v0s_A 1 MPRVKLGTQGLEVSKLGFGCMGLSGDYNDALPEEQGIAVIKEAFNCGITFFDTSDIYGENGSNEELLGKALKQLPREXIQ 80 (337)
T ss_dssp CCEEECSSSSCEEESSCEECGGGC-------CHHHHHHHHHHHHHTTCCEEECCTTSSSTTHHHHHHHHHHTTSCGGGCE
T ss_pred CCeeecCCCCceecCeeecccccCCCCCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCcHHHHHHHHHhhcCCcceE
Confidence 78999999999999999999999987776678899999999999999999999999997 68999999999976799999
Q ss_pred EEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCH
Q 028240 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASP 167 (211)
Q Consensus 88 i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~ 167 (211)
|+||++......+....+.+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||||||++
T Consensus 81 i~TK~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~ 160 (337)
T 3v0s_A 81 VGTKFGIHEIGFSGVKAXGTPDYVRSCCEASLKRLDVDYIDLFYIHRIDTTVPIEITMGELXXLVEEGKIXYVGLSEASP 160 (337)
T ss_dssp EEEEECEEEEETTEEEECCCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCH
T ss_pred EEeeeccccCCCCcccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCeeEEeccCCCH
Confidence 99999865322222334668999999999999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 168 DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++++++++..+++++|++||++++..+.+++++|+++||+|+|
T Consensus 161 ~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a 203 (337)
T 3v0s_A 161 DTIRRAHAVHPVTALQIEYSLWTRDIEDEIVPLCRQLGIGIVP 203 (337)
T ss_dssp HHHHHHHHHSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEE
T ss_pred HHHHHHhccCCceEEEeeccccccchhHHHHHHHHHcCceEEE
Confidence 9999999999999999999999998777899999999999987
No 2
>3n2t_A Putative oxidoreductase; aldo/keto reductase superfamily, AKR, AKR11B4, TIM barrel; 2.00A {Gluconobacter oxydans} SCOP: c.1.7.0
Probab=100.00 E-value=5.3e-53 Score=357.93 Aligned_cols=205 Identities=30% Similarity=0.488 Sum_probs=185.1
Q ss_pred CcCCCCCeeecCCCCcccccceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCC
Q 028240 4 DKKLQVPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELP 82 (211)
Q Consensus 4 ~~~~~~~~~~lg~~g~~vs~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~ 82 (211)
+.|+.|+|++||++|++||+||||||++++. |+ ..+++++.++|+.|++.|||+||||+.||.|.+|+.+|++|+. +
T Consensus 14 ~~~m~M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~ 91 (348)
T 3n2t_A 14 GSHMASDTIRIPGIDTPLSRVALGTWAIGGWMWG-GPDDDNGVRTIHAALDEGINLIDTAPVYGFGHSEEIVGRALAE-K 91 (348)
T ss_dssp ---CTTSEECCTTCSSCEESEEEECTTSSCSSSC-STTHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHH-S
T ss_pred CCCCCceeeecCCCCCccCCEeEeCccccCCCCC-CCCHHHHHHHHHHHHHcCCCEEEChhhcCCChHHHHHHHHHhh-C
Confidence 4466799999999999999999999999863 54 4688999999999999999999999999999999999999998 8
Q ss_pred CCcEEEEeccccccC-CCc---ccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc
Q 028240 83 RENIQVATKFGFVEL-GFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (211)
Q Consensus 83 r~~~~i~tK~~~~~~-~~~---~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (211)
|++++|+||++.... .++ ....+.+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||
T Consensus 92 R~~v~I~TK~g~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir 171 (348)
T 3n2t_A 92 PNKAHVATKLGLHWVGEDEKNMKVFRDSRPARIRKEVEDSLRRLRVETIDLEQIHWPDDKTPIDESARELQKLHQDGKIR 171 (348)
T ss_dssp CCCCEEEEEECEEEESSSTTTCEEEECCCHHHHHHHHHHHHHHHTCSSEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEE
T ss_pred CCeEEEEEeecCCCcCCCcccccccCCCCHHHHHHHHHHHHHHhCCCcEEEEEecCCCCCCCHHHHHHHHHHHHHhCcce
Confidence 999999999975321 111 2234578999999999999999999999999999999999999999999999999999
Q ss_pred EEEeCCCCHHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 159 YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+||||||++++++++++..+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 172 ~iGvSn~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a 223 (348)
T 3n2t_A 172 ALGVSNFSPEQMDIFREVAPLATIQPPLNLFERTIEKDILPYAEKHNAVVLA 223 (348)
T ss_dssp EEEEESCCHHHHHHHHHHSCCCEEECBCBTTBCGGGGTHHHHHHHHTCEEEE
T ss_pred EEecCCCCHHHHHHHHHhCCccEEEeeecCccCchHHHHHHHHHHcCCeEEE
Confidence 9999999999999999999999999999999998778899999999999997
No 3
>1pyf_A IOLS protein; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; 1.80A {Bacillus subtilis} SCOP: c.1.7.1 PDB: 1pz0_A*
Probab=100.00 E-value=1e-52 Score=351.43 Aligned_cols=200 Identities=30% Similarity=0.551 Sum_probs=180.7
Q ss_pred CCeeecCCCCcccccceeccccCCCC--CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcE
Q 028240 9 VPRVKLGTQGLEVSKLGYGCMSLSGC--YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENI 86 (211)
Q Consensus 9 ~~~~~lg~~g~~vs~lg~G~~~~~~~--~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~ 86 (211)
|+|++||++|++||+||||||++++. |+ ..+++++.++|+.|++.||||||||+.||+|.+|+.+|++|+..+|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~R~~~ 79 (312)
T 1pyf_A 1 MKKAKLGKSDLQVFPIGLGTNAVGGHNLYP-NLNEETGKELVREAIRNGVTMLDTAYIYGIGRSEELIGEVLREFNREDV 79 (312)
T ss_dssp -CCEECTTSCCEECSBCEECTTSSCTTTCS-SCCHHHHHHHHHHHHHTTCCEEECCTTTTTTHHHHHHHHHHTTSCGGGC
T ss_pred CCeeecCCCCCcccCEeEeccccCCCCCCC-CCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHhhhcCCCeE
Confidence 78999999999999999999999864 43 3688999999999999999999999999999999999999997679999
Q ss_pred EEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCC
Q 028240 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (211)
Q Consensus 87 ~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (211)
+|+||++... ..+....+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~g~~~-~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (312)
T 1pyf_A 80 VIATKAAHRK-QGNDFVFDNSPDFLKKSVDESLKRLNTDYIDLFYIHFPDEHTPKDEAVNALNEMKKAGKIRSIGVSNFS 158 (312)
T ss_dssp EEEEEECEEE-ETTEEEECCCHHHHHHHHHHHHHHHTSSCBSEEEECSCCSSSCHHHHHHHHHHHHHTTSBSCEEEESCC
T ss_pred EEEEEeCCCC-CCCCCCCCCCHHHHHHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHHCCCcCEEEecCCC
Confidence 9999986321 111112356899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+++++++++..+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a 202 (312)
T 1pyf_A 159 LEQLKEANKDGLVDVLQGEYNLLNREAEKTFFPYTKEHNISFIP 202 (312)
T ss_dssp HHHHHHHTTTSCCCEEEEECBTTBCGGGTTHHHHHHHHTCEEEE
T ss_pred HHHHHHHHhhCCceEEeccCCccccchHHHHHHHHHHcCCeEEE
Confidence 99999999999999999999999998777899999999999987
No 4
>1pz1_A GSP69, general stress protein 69; beta-alpha barrel, aldo-keto reductase, TIM barrel, oxidoreductase; HET: NAP; 2.20A {Bacillus subtilis} SCOP: c.1.7.1
Probab=100.00 E-value=7.3e-52 Score=349.04 Aligned_cols=200 Identities=32% Similarity=0.519 Sum_probs=181.4
Q ss_pred CCeeecCCCCcccccceeccccCCCC-CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcC-CCCcE
Q 028240 9 VPRVKLGTQGLEVSKLGYGCMSLSGC-YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL-PRENI 86 (211)
Q Consensus 9 ~~~~~lg~~g~~vs~lg~G~~~~~~~-~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~-~r~~~ 86 (211)
|++++||++|++||+||||||++++. |+ ..+++++.++|++|++.||||||||+.||+|.+|+.+|++|++. +|+++
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~~~~g-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~R~~~ 79 (333)
T 1pz1_A 1 MEYTSIADTGIEASRIGLGTWAIGGTMWG-GTDEKTSIETIRAALDQGITLIDTAPAYGFGQSEEIVGKAIKEYMKRDQV 79 (333)
T ss_dssp CCEEECTTSSCEEESEEEECTGGGCTTTT-CCCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHHHHHHHTCGGGC
T ss_pred CCceecCCCCCcccCEeEechhhcCCcCC-CCCHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhcCCCcCeE
Confidence 78999999999999999999999864 54 46889999999999999999999999999999999999999864 69999
Q ss_pred EEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCC
Q 028240 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEAS 166 (211)
Q Consensus 87 ~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~ 166 (211)
+|+||++.... .+....+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++||||+||||||+
T Consensus 80 ~i~TK~~~~~~-~~~~~~~~~~~~i~~~~~~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~ 158 (333)
T 1pz1_A 80 ILATKTALDWK-NNQLFRHANRARIVEEVENSLKRLQTDYIDLYQVHWPDPLVPIEETAEVMKELYDAGKIRAIGVSNFS 158 (333)
T ss_dssp EEEEEECEEES-SSCEEECCCHHHHHHHHHHHHHHTTSSCBSEEEECSCCTTSCHHHHHHHHHHHHHTTSBSCEEECSCC
T ss_pred EEEEeeCccCC-CCCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCCCCCCCHHHHHHHHHHHHHCCcCCEEEecCCC
Confidence 99999973211 11111245899999999999999999999999999999888899999999999999999999999999
Q ss_pred HHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 167 PDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+++++++++..+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 159 ~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~~l~~~~~~~gi~v~a 202 (333)
T 1pz1_A 159 IEQMDTFRAVAPLHTIQPPYNLFEREMEESVLPYAKDNKITTLL 202 (333)
T ss_dssp HHHHHHHHTTSCCCEECCBCBTTBCGGGGTHHHHHHHTTCEEEE
T ss_pred HHHHHHHHhcCCcEEEeccccCccCchHHHHHHHHHHcCceEEE
Confidence 99999999999999999999999998777899999999999997
No 5
>3n6q_A YGHZ aldo-keto reductase; TIM barrel, oxidoreductase; 1.80A {Escherichia coli} SCOP: c.1.7.0 PDB: 4ast_A 4aub_A*
Probab=100.00 E-value=2.1e-51 Score=347.86 Aligned_cols=206 Identities=27% Similarity=0.479 Sum_probs=181.7
Q ss_pred CCCCcCCC-CCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CcHHHHHHHH
Q 028240 1 MAEDKKLQ-VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKA 77 (211)
Q Consensus 1 m~~~~~~~-~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~~E~~lG~~ 77 (211)
||++...+ |+|++||++|++||+||||||+. ++...+++++.++|+.|++.||||||||+.||+ |++|+.+|++
T Consensus 4 ~~~~~~~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~a 80 (346)
T 3n6q_A 4 LANPERYGQMQYRYCGKSGLRLPALSLGLWHN---FGHVNALESQRAILRKAFDLGITHFDLANNYGPPPGSAEENFGRL 80 (346)
T ss_dssp CCCTTTTSSCCEEECTTSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHH
T ss_pred ccCCCcccCceeEecCCCCCeecCeeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCCCcHHHHHHHH
Confidence 67777775 99999999999999999999863 334568899999999999999999999999998 9999999999
Q ss_pred Hhc--CC-CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc
Q 028240 78 LKE--LP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (211)
Q Consensus 78 l~~--~~-r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (211)
|++ .+ |+++||+||++....+. ......+++.+++++++||++||+||||+|++|+|++..+++++|++|++|+++
T Consensus 81 l~~~~~~~R~~~~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~ 159 (346)
T 3n6q_A 81 LREDFAAYRDELIISTKAGYDMWPG-PYGSGGSRKYLLASLDQSLKRMGLEYVDIFYSHRVDENTPMEETASALAHAVQS 159 (346)
T ss_dssp HHHHCTTTGGGCEEEEEECSCCSSS-TTSSSSCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHT
T ss_pred HHhhcccccccEEEEEEecccCCCC-CCCCCCCHHHHHHHHHHHHHHhCCCcEeEEEEeCCCCCCCHHHHHHHHHHHHHc
Confidence 986 34 99999999987543221 111234899999999999999999999999999999999999999999999999
Q ss_pred CcccEEEeCCCCHHHHHHHhcc-----CCceEEeccCCccccCchh-hHHHHHHHcCCeeee
Q 028240 155 GKIKYIGLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIEN-EIVPLCRFVRLAVKS 210 (211)
Q Consensus 155 G~ir~iGvs~~~~~~l~~~~~~-----~~~~~~q~~~~~~~~~~~~-~~~~~~~~~gi~v~a 210 (211)
|+||+||||||++++++++++. .+++++|++||++++..+. +++++|+++||+|+|
T Consensus 160 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~~l~~~~~~~gi~v~a 221 (346)
T 3n6q_A 160 GKALYVGISSYSPERTQKMVELLREWKIPLLIHQPSYNLLNRWVDKSGLLDTLQNNGVGCIA 221 (346)
T ss_dssp TSEEEEEEESCCHHHHHHHHHHHHTTTCCCCEEECBCBTTBCHHHHTTHHHHHHHHTCEEEE
T ss_pred CCeeEEEeCCCCHHHHHHHHHHHHHcCCCeEEEeccCchhhcCcchhhHHHHHHHcCCeEEE
Confidence 9999999999999999987653 5789999999999998665 799999999999997
No 6
>1ynp_A Oxidoreductase, AKR11C1; aldo-keto reductase, NADPH; HET: SUC; 1.25A {Bacillus halodurans} PDB: 1ynq_A*
Probab=100.00 E-value=4e-51 Score=342.31 Aligned_cols=197 Identities=35% Similarity=0.527 Sum_probs=172.5
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCc
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPREN 85 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~ 85 (211)
...|+|+++|++|++||+||||||+++. +.+++.++|+.|++.|||+||||+.||.|.+|+.+|++|+. +|++
T Consensus 18 ~~~M~~r~lg~tg~~vs~lglGt~~~g~------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~-~R~~ 90 (317)
T 1ynp_A 18 GSHMKKRQLGTSDLHVSELGFGCMSLGT------DETKARRIMDEVLELGINYLDTADLYNQGLNEQFVGKALKG-RRQD 90 (317)
T ss_dssp --CCCEEECTTSSCEEESBCBCSCCCCS------CHHHHHHHHHHHHHTTCCEEECSCBTTBCCCHHHHHHHHTT-CGGG
T ss_pred cCCcceeecCCCCCcccCEeEcCcccCC------CHHHHHHHHHHHHHcCCCeEECccccCCCchHHHHHHHHhc-CCCe
Confidence 3458999999999999999999998863 45889999999999999999999999999999999999997 7999
Q ss_pred EEEEeccccccCCC-cccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 86 IQVATKFGFVELGF-TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 86 ~~i~tK~~~~~~~~-~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
++|+||++...... ..+..+.+++.+++++++||++||+||||+|++|||+...+.+++|++|++|+++|+||+|||||
T Consensus 91 v~I~TK~~~~~~~~~~~~~~~~~~~~v~~~~e~SL~rL~~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn 170 (317)
T 1ynp_A 91 IILATKVGNRFEQGKEGWWWDPSKAYIKEAVKDSLRRLQTDYIDLYQLHGGTIDDPIDETIEAFEELKQEGVIRYYGISS 170 (317)
T ss_dssp CEEEEEC---------------CHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHHTSEEEEEEEC
T ss_pred EEEEeeeCCCcCCCCccccCCCCHHHHHHHHHHHHHHHCCCcEeEEEecCCCCCCChHHHHHHHHHHHhCCceEEEEecC
Confidence 99999998643211 11123568999999999999999999999999999998888999999999999999999999999
Q ss_pred CCHHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++++++++++..+|+++|++||++++..+. ++++|+++||+|+|
T Consensus 171 ~~~~~l~~~~~~~~~~~~Q~~~nl~~~~~e~-l~~~~~~~gI~v~a 215 (317)
T 1ynp_A 171 IRPNVIKEYLKRSNIVSIMMQYSILDRRPEE-WFPLIQEHGVSVVV 215 (317)
T ss_dssp CCHHHHHHHHHHSCCCEEEEECBTTBCGGGG-GHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHhcCCCEEEeccCCchhCCHHH-HHHHHHHcCCeEEE
Confidence 9999999999988999999999999997654 99999999999987
No 7
>3eau_A Voltage-gated potassium channel subunit beta-2; kvbeta, cortisone, NADPH, cytoplasm, ION transport, ionic channel, NADP, phosphoprotein; HET: NDP PDN; 1.82A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2r9r_A* 2a79_A* 3lnm_A* 1exb_A* 3eb4_A* 3eb3_A* 1qrq_A* 1zsx_A*
Probab=100.00 E-value=1.6e-50 Score=340.15 Aligned_cols=198 Identities=27% Similarity=0.429 Sum_probs=177.0
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
.|.||+||++|++||+||||||.. ||...+++++.++|++|++.||||||||+.||+|.+|+.+|++|++ .+|++
T Consensus 2 ~m~yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~ 78 (327)
T 3eau_A 2 LQFYRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRSS 78 (327)
T ss_dssp CCSEEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGGG
T ss_pred cchhcccCCCCCcccceeecCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHHhcCCccCe
Confidence 589999999999999999999842 3445788999999999999999999999999999999999999996 47999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCC
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (211)
++|+||+++.... ....+++++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+||||||
T Consensus 79 v~I~TK~~~~~~~--~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 156 (327)
T 3eau_A 79 LVITTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSRW 156 (327)
T ss_dssp CEEEEEESBCCSS--GGGBSSSHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEEeecCCCCC--CCCCCCCHHHHHHHHHHHHHHhCCCccceEEEeCCCCCCCHHHHHHHHHHHHHcCCeeEEeecCC
Confidence 9999998643221 12345789999999999999999999999999999999999999999999999999999999999
Q ss_pred CHHHHHHHhcc------CCceEEeccCCccccC-chhhHHHHHHHcCCeeee
Q 028240 166 SPDTIRRAHAV------HPITAVQLEWSLWARD-IENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 166 ~~~~l~~~~~~------~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~a 210 (211)
++++++++... .+|+++|++||++++. .+.+++++|+++||+|+|
T Consensus 157 ~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~l~~~~~~~gi~v~a 208 (327)
T 3eau_A 157 SSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMT 208 (327)
T ss_dssp CHHHHHHHHHHHHHTTCCCCCEEEEECBTTBCHHHHHHHHHHHHHHCCEEEE
T ss_pred CHHHHHHHHHHHHHcCCCCceeecccccccccchhHhhHHHHHHHcCCeEEE
Confidence 99999988653 5899999999999986 345799999999999987
No 8
>1ur3_M Hypothetical oxidoreductase YDHF; NADP binding, aldo-keto reductase; 2.57A {Escherichia coli} SCOP: c.1.7.1 PDB: 1og6_A*
Probab=100.00 E-value=2.2e-50 Score=338.02 Aligned_cols=199 Identities=25% Similarity=0.342 Sum_probs=178.6
Q ss_pred CCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcC--CCCcE
Q 028240 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL--PRENI 86 (211)
Q Consensus 9 ~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~--~r~~~ 86 (211)
|++++||+++++||+||||||++|+ | ..+++++.++|+.|++.|||+||||+.||.|.+|+.+|++|++. +|+++
T Consensus 23 M~~~~Lg~~~~~vs~lglGt~~~g~-~--~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~~v 99 (319)
T 1ur3_M 23 VQRITIAPQGPEFSRFVMGYWRLMD-W--NMSARQLVSFIEEHLDLGVTTVDHADIYGGYQCEAAFGEALKLAPHLRERM 99 (319)
T ss_dssp CCEEECSTTCCEEESSEEECTTTTT-T--TCCHHHHHHHHHHHHHHTCCEEECCSSTTTTTHHHHHHHHHHHCGGGTTTC
T ss_pred CceEECCCCCcccccccEeccccCC-C--CCCHHHHHHHHHHHHHcCCCeEEcccccCCCcHHHHHHHHHHhCCCCCCeE
Confidence 7999999999999999999999986 5 35789999999999999999999999999999999999999863 69999
Q ss_pred EEEeccccccCCCc---ccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC
Q 028240 87 QVATKFGFVELGFT---SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (211)
Q Consensus 87 ~i~tK~~~~~~~~~---~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (211)
+|+||++......+ ....+.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++|+||+||||
T Consensus 100 ~I~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvS 179 (319)
T 1ur3_M 100 EIVSKCGIATTAREENVIGHYITDRDHIIKSAEQSLINLATDHLDLLLIHRPDPLMDADEVADAFKHLHQSGKVRHFGVS 179 (319)
T ss_dssp EEEEEECEECTTSTTCSSCEECCCHHHHHHHHHHHHHHHTCSCBSEEEECSCCTTCCHHHHHHHHHHHHHTTSBCCEEEE
T ss_pred EEEEeeccCCCCCcccccccCCCCHHHHHHHHHHHHHHhCCCCeeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEec
Confidence 99999986322111 012356899999999999999999999999999999888899999999999999999999999
Q ss_pred CCCHHHHHHHhccC--CceEEeccCCccccCc-hhhHHHHHHHcCCeeee
Q 028240 164 EASPDTIRRAHAVH--PITAVQLEWSLWARDI-ENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 164 ~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~-~~~~~~~~~~~gi~v~a 210 (211)
||++++++++.+.. +|+++|++||++++.. +.+++++|+++||+|+|
T Consensus 180 n~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~~~~~~ll~~~~~~gi~v~a 229 (319)
T 1ur3_M 180 NFTPAQFALLQSRLPFTLATNQVEISPVHQPLLLDGTLDQLQQLRVRPMA 229 (319)
T ss_dssp SCCHHHHHHHHTTCSSCCCCEEEECBTTBCGGGTSSHHHHHHHHTCCCEE
T ss_pred CCCHHHHHHHHHhcCCCcEEEEccCchhhCchhhHHHHHHHHHcCCeEEE
Confidence 99999999998764 7999999999999974 46799999999999987
No 9
>3erp_A Putative oxidoreductase; funded by the national institute of allergy and infectious D of NIH contract number HHSN272200700058C; 1.55A {Salmonella enterica subsp}
Probab=100.00 E-value=4.3e-50 Score=340.64 Aligned_cols=201 Identities=27% Similarity=0.501 Sum_probs=178.1
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCC--CcHHHHHHHHHhc-CC
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGP--YTNEILLGKALKE-LP 82 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~~E~~lG~~l~~-~~ 82 (211)
...|+|++||++|++||+||||||+. ||...+++++.++|++|++.|||+||||+.||+ |.+|+.+|++|++ .+
T Consensus 31 ~~~M~~r~lg~tg~~vs~lglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~G~sE~~lG~al~~~~~ 107 (353)
T 3erp_A 31 YHTMEYRRCGRSGVKLPAISLGLWHN---FGDTTRVENSRALLQRAFDLGITHFDLANNYGPPPGSAECNFGRILQEDFL 107 (353)
T ss_dssp TTSCCEEECSSSSCEEESEEEECSSS---CSTTSCHHHHHHHHHHHHHTTCCEEECCTTCTTTTTHHHHHHHHHHHHHTG
T ss_pred cccceeeecCCCCCccCCeeecChhh---cCCCCCHHHHHHHHHHHHHcCCCEEEChhhhCCCCChHHHHHHHHHHhhcc
Confidence 34599999999999999999999942 233468899999999999999999999999998 9999999999985 33
Q ss_pred --CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE
Q 028240 83 --RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI 160 (211)
Q Consensus 83 --r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i 160 (211)
|+++||+||++...... ......+++.+++++++||++||+||||+|++|||++..+++++|++|++|+++||||+|
T Consensus 108 ~~R~~v~I~TK~g~~~~~~-~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~i 186 (353)
T 3erp_A 108 PWRDELIISTKAGYTMWDG-PYGDWGSRKYLIASLDQSLKRMGLEYVDIFYHHRPDPETPLKETMKALDHLVRHGKALYV 186 (353)
T ss_dssp GGGGGCEEEEEESSCCSSS-TTSSTTCHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEE
T ss_pred CCCCeEEEEeeeccCCCCC-cccCCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEE
Confidence 99999999997542221 111234899999999999999999999999999999999999999999999999999999
Q ss_pred EeCCCCHHHHHHHhcc-----CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 161 GLSEASPDTIRRAHAV-----HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 161 Gvs~~~~~~l~~~~~~-----~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|||||++++++++++. .+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 187 GvSn~~~~~l~~~~~~~~~~~~~~~~~Q~~~~~~~~~~e~~ll~~~~~~gI~v~a 241 (353)
T 3erp_A 187 GISNYPADLARQAIDILEDLGTPCLIHQPKYSLFERWVEDGLLALLQEKGVGSIA 241 (353)
T ss_dssp EEESCCHHHHHHHHHHHHHHTCCEEEEECBCBTTBCGGGGTHHHHHHHHTCEEEE
T ss_pred EecCCCHHHHHHHHHHHHHcCCCeEEeeccccccccchhhHHHHHHHHcCCeEEE
Confidence 9999999999988764 5899999999999998777899999999999997
No 10
>4exb_A Putative uncharacterized protein; aldo-keto reductase, NADP+ binding, oxidoreducta; 2.75A {Pseudomonas aeruginosa} PDB: 4exa_A
Probab=100.00 E-value=2.4e-50 Score=334.02 Aligned_cols=197 Identities=24% Similarity=0.302 Sum_probs=174.4
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCC--------CCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHH
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGC--------YNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA 77 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~--------~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~ 77 (211)
+.+|+|++||++|++||+||||||++++. |+ ..+++++.++|+.|++.|||+||||+.|| .+|+.+|++
T Consensus 27 ~~~m~~r~Lg~tg~~vs~lglGt~~~g~~~~~~~~~~~~-~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg--~sE~~lG~a 103 (292)
T 4exb_A 27 TLHDLHRPLGDTGLAVSPLGLGTVKFGRDQGVKYPSGFT-IPDDREAADLLALARDLGINLIDTAPAYG--RSEERLGPL 103 (292)
T ss_dssp CSTTCCEECTTSSCEECSEEEECSTTTCC---------C-CCCHHHHHHHHHHHHHTTCCEEECCTTST--THHHHHHHH
T ss_pred CCCceeeecCCCCCccCCEeEcccccCCCcccccccccC-CCCHHHHHHHHHHHHHcCCCEEEcCCccc--hHHHHHHHH
Confidence 35689999999999999999999999863 33 36889999999999999999999999999 499999999
Q ss_pred HhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecC--CCCCCHH-HHHHHHHHHHHc
Q 028240 78 LKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--DTSVPIE-ETIGEMKKLVEE 154 (211)
Q Consensus 78 l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~--~~~~~~~-~~~~~l~~l~~~ 154 (211)
|+. +|+++||+||++..... +....+.+++.+++++++||++||+||||+|++||| ++..+.+ ++|++|++|+++
T Consensus 104 l~~-~R~~v~I~TK~~~~~~~-~~~~~~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~d~~~~~~~e~~~al~~l~~~ 181 (292)
T 4exb_A 104 LRG-QREHWVIVSKVGEEFVD-GQSVFDFSAAHTRRSVERSLKRLETDRIELVLVHSDGNDLDILENSEVYPTLAALKRE 181 (292)
T ss_dssp HTT-TGGGCEEEEEESBC--C-CSCCBCCCHHHHHHHHHHHHHHTTSSCEEEEEEECCSCHHHHHHHSSHHHHHHHHHHT
T ss_pred hcc-CCCcEEEEEeeccccCC-CCccCCCCHHHHHHHHHHHHHHhCCCceeEEEEecCCCCccccchHHHHHHHHHHHHC
Confidence 998 89999999999864321 122346789999999999999999999999999999 4444455 899999999999
Q ss_pred CcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 155 GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 155 G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|+||+||||||++++++++++. |+++|++||++++.. .+++++|+++||+|+|
T Consensus 182 Gkir~iGvSn~~~~~l~~~~~~--~~~~Q~~~~~~~~~~-~~l~~~~~~~gi~v~a 234 (292)
T 4exb_A 182 GLIGAYGLSGKTVEGGLRALRE--GDCAMVTYNLNERAE-RPVIEYAAAHAKGILV 234 (292)
T ss_dssp TSEEEEEEECSSHHHHHHHHHH--SSEEEEECSSSCCTT-HHHHHHHHHTTCEEEE
T ss_pred CCceEEEeCCCCHHHHHHHHHh--hcEEeeccccccCCH-HHHHHHHHHCCcEEEE
Confidence 9999999999999999999887 899999999999976 6899999999999987
No 11
>3lut_A Voltage-gated potassium channel subunit beta-2; voltage gating, potassium channel, KV1.2, gating charges, no analysis, ION transport; HET: NAP; 2.90A {Rattus norvegicus}
Probab=100.00 E-value=3.2e-50 Score=343.09 Aligned_cols=198 Identities=28% Similarity=0.444 Sum_probs=177.2
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCC
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~ 84 (211)
..| |++||++|++||+||||||+. ||...+++++.++|++|++.||||||||+.||+|++|+.+|++|++ .+|+
T Consensus 36 ~~m-yr~lG~tg~~vs~iglGt~~~---~g~~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~R~ 111 (367)
T 3lut_A 36 LQF-YRNLGKSGLRVSCLGLGTWVT---FGGQITDEMAEHLMTLAYDNGINLFDTAEVYAAGKAEVVLGNIIKKKGWRRS 111 (367)
T ss_dssp CCS-EEESTTSSCEEESEEEECTTC---CCCCSCHHHHHHHHHHHHHTTCCEEEEETTGGGGHHHHHHHHHHHHHTCCGG
T ss_pred hhc-eeecCCCCCcccceeECCccc---cCCCCCHHHHHHHHHHHHHcCCCEEECccccCCCchHHHHHHHHHhCCCCCc
Confidence 568 999999999999999999842 3445788999999999999999999999999999999999999986 4699
Q ss_pred cEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 85 ~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
+++|+||+++.... ....+++++.+++++++||++||+||||+|++|||++..+++++|++|++|+++|+||+|||||
T Consensus 112 ~v~I~TK~~~~~~~--~~~~~~s~~~i~~~~e~SL~rLg~dyiDl~~lH~pd~~~~~~e~~~al~~l~~~Gkir~iGvSn 189 (367)
T 3lut_A 112 SLVITTKIFWGGKA--ETERGLSRKHIIEGLKASLERLQLEYVDVVFANRPDPNTPMEETVRAMTHVINQGMAMYWGTSR 189 (367)
T ss_dssp GCEEEEEESBCCSS--GGGBSSCHHHHHHHHHHHHHHHTCSCEEEEEESSCCTTSCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred eEEEEeccccCCCC--ccCCCCCHHHHHHHHHHHHHHhCCCccceEEecCCCCCCCHHHHHHHHHHHHHcCCeeEEEecC
Confidence 99999999653221 1234578999999999999999999999999999999999999999999999999999999999
Q ss_pred CCHHHHHHHhcc------CCceEEeccCCccccCc-hhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAV------HPITAVQLEWSLWARDI-ENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~-~~~~~~~~~~~gi~v~a 210 (211)
|+++++++++.. .+|+++|++||++++.. +.+++++|+++||+|+|
T Consensus 190 ~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~~~~~~~~e~~l~~~~~~~gi~v~a 242 (367)
T 3lut_A 190 WSSMEIMEAYSVARQFNLIPPICEQAEYHMFQREKVEVQLPELFHKIGVGAMT 242 (367)
T ss_dssp CCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCHHHHTHHHHHHHHHCCEEEE
T ss_pred CCHHHHHHHHHHHHHcCCCCceeeeccccceecchhHhHHHHHHHHcCCeEEE
Confidence 999999987653 58999999999999975 45899999999999987
No 12
>1lqa_A TAS protein; TIM barrel, structure 2 function project, S2F, structural GE oxidoreductase; HET: NDP; 1.60A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=5.8e-49 Score=332.83 Aligned_cols=198 Identities=25% Similarity=0.378 Sum_probs=172.1
Q ss_pred CCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcC-------CCcHHHHHHHHHhcC
Q 028240 9 VPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYG-------PYTNEILLGKALKEL 81 (211)
Q Consensus 9 ~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-------~g~~E~~lG~~l~~~ 81 (211)
|+|++||++|++||+||||||++|+ ..+++++.++|++|++.|||+||||+.|| .|.+|+.+|++|++.
T Consensus 1 M~~~~lg~tg~~vs~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~~~~~~~~G~sE~~lG~al~~~ 76 (346)
T 1lqa_A 1 MQYHRIPHSSLEVSTLGLGTMTFGE----QNSEADAHAQLDYAVAQGINLIDVAEMYPVPPRPETQGLTETYVGNWLAKH 76 (346)
T ss_dssp CCEEECTTSSCEEESEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTCSSSCCTTTTTHHHHHHHHHHHHH
T ss_pred CCeeecCCCCCeecCeeEEccccCC----CCCHHHHHHHHHHHHHcCCCEEEChhhcCCCccCCCCCccHHHHHHHHhhc
Confidence 7899999999999999999998753 35789999999999999999999999996 688999999999864
Q ss_pred -CCCcEEEEeccccccCCCccc---ccCCChHHHHHHHHHHHhhcCCCceeEEEeecCC---------------C--CCC
Q 028240 82 -PRENIQVATKFGFVELGFTSV---IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---------------T--SVP 140 (211)
Q Consensus 82 -~r~~~~i~tK~~~~~~~~~~~---~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~---------------~--~~~ 140 (211)
+|++++|+||++........+ ..+.+++.+++++++||++||+||||+|++|||+ + ..+
T Consensus 77 ~~R~~~~i~TK~~~~~~~~~~~~~~~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~d~~~~~~ 156 (346)
T 1lqa_A 77 GSREKLIIASKVSGPSRNNDKGIRPDQALDRKNIREALHDSLKRLQTDYLDLYQVHWPQRPTNCFGKLGYSWTDSAPAVS 156 (346)
T ss_dssp CCGGGCEEEEEECCSCCTTCCCSSTTCCSSHHHHHHHHHHHHHHHTSSCEEEEEECSCSSCCSCTTCCSCCCCSSCCSSC
T ss_pred CCCceEEEEEeECCCcCCcccccCCCCCCCHHHHHHHHHHHHHHhCCCceeEEEecCccccccccccccccccccccCCC
Confidence 699999999997531100000 1246899999999999999999999999999993 3 456
Q ss_pred HHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc------CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV------HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~------~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++++|++|++|+++|+||+||||||+++++++++.. .+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 157 ~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~~~~~Q~~~~l~~~~~~~~l~~~~~~~gi~v~a 232 (346)
T 1lqa_A 157 LLDTLDALAEYQRAGKIRYIGVSNETAFGVMRYLHLADKHDLPRIVTIQNPYSLLNRSFEVGLAEVSQYEGVELLA 232 (346)
T ss_dssp HHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHHHHHTCCCCCEEEEECBTTBCTHHHHHHHHHHHHCCEEEE
T ss_pred HHHHHHHHHHHHHcCCeEEEEecCCCHHHHHHHHHHHHHcCCCCceEEeccCChhhchhHHHHHHHHHHcCCeEEE
Confidence 889999999999999999999999999988776542 4799999999999998777899999999999987
No 13
>3f7j_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.70A {Bacillus subtilis} PDB: 3d3f_A*
Probab=100.00 E-value=1.5e-47 Score=314.88 Aligned_cols=184 Identities=26% Similarity=0.368 Sum_probs=167.2
Q ss_pred CCCCcCCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc
Q 028240 1 MAEDKKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE 80 (211)
Q Consensus 1 m~~~~~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~ 80 (211)
|.++. |++++|| +|++||+||||||+++ +++++.+++++|++.||||||||+.|| +|+.+|++|++
T Consensus 1 m~~~~---m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~G~~~~DTA~~Yg---~E~~lG~al~~ 66 (276)
T 3f7j_A 1 MPTSL---KDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKE 66 (276)
T ss_dssp CCSST---TCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHH
T ss_pred CCcCC---cceEECC-CCCEecceeecCCcCC-------CHHHHHHHHHHHHHcCCCEEECcCccc---CHHHHHHHHhh
Confidence 66655 9999997 8999999999999863 458899999999999999999999999 79999999994
Q ss_pred --CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc
Q 028240 81 --LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK 158 (211)
Q Consensus 81 --~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir 158 (211)
.+|++++|+||++.. +.+++.+++++++||++||+||||+|++|||++.. .+++|++|++|+++|+||
T Consensus 67 ~~~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~~lH~p~~~~-~~~~~~~l~~l~~~Gkir 136 (276)
T 3f7j_A 67 SGVAREELFITSKVWNE---------DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIR 136 (276)
T ss_dssp HCSCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSS-HHHHHHHHHHHHHTTSEE
T ss_pred cCCCcccEEEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCeeEEEEEecCCCCc-HHHHHHHHHHHHHcCCcc
Confidence 579999999999764 34799999999999999999999999999998754 889999999999999999
Q ss_pred EEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 159 YIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+||||||++++++++++.. ++.++|++||++.+ +.+++++|+++||+|+|
T Consensus 137 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a 188 (276)
T 3f7j_A 137 AIGVSNFQVHHLEELLKDAEIKPMVNQVEFHPRLT--QKELRDYCKGQGIQLEA 188 (276)
T ss_dssp EEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBC--CHHHHHHHHHHTCEEEE
T ss_pred EEEeccCCHHHHHHHHHhcCCCceeeeeeeccccC--CHHHHHHHHHCCCEEEE
Confidence 9999999999999998764 57899999999887 45899999999999987
No 14
>3ln3_A Dihydrodiol dehydrogenase; putative reductase, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MLY MSE NAD; 1.18A {Mus musculus} SCOP: c.1.7.1
Probab=100.00 E-value=2.4e-47 Score=320.42 Aligned_cols=184 Identities=23% Similarity=0.356 Sum_probs=166.4
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------ 80 (211)
..|++++| ++|++||+||||||+++ ..+++++.+++++|++.||||||||+.|| +|+.+|++|++
T Consensus 4 ~~m~~~~L-~tg~~v~~lglGt~~~~-----~~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~ 74 (324)
T 3ln3_A 4 SXQHCVXL-NDGHLIPALGFGTYXPX-----EVPXSXSLEAACLALDVGYRHVDTAYAYQ---VEEEIGQAIQSXIXAGV 74 (324)
T ss_dssp --CCEEEC-TTSCEEESSEEECCCCT-----TSCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred cCCceEEC-CCCCCcCCeeecCCccc-----CCChHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHhhccCC
Confidence 35899999 89999999999999864 35789999999999999999999999999 89999999986
Q ss_pred CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCH
Q 028240 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (211)
Q Consensus 81 ~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~ 141 (211)
.+|+++||+||++.. ..+++.+++++++||++||+||||+|++|||++ ..++
T Consensus 75 ~~R~~~~I~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~ 145 (324)
T 3ln3_A 75 VXREDLFVTTKLWCT---------CFRPELVXPALEXSLXXLQLDYVDLYIMHYPVPMXSGDNDFPVNEQGXSLLDTVDF 145 (324)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCH
T ss_pred cccceeEEEeeeCCc---------cCCHHHHHHHHHHHHHHhCCCcceEEEEecCccccccccccccccccccccccCCH
Confidence 479999999999754 347999999999999999999999999999975 3468
Q ss_pred HHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--C--ceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+++|++|++|+++|+||+||||||++++++++++.. + |.++|++||++.+ +.+++++|+++||+|+|
T Consensus 146 ~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a 216 (324)
T 3ln3_A 146 CDTWERLEECXDAGLVXSIGVSNFNHRQLERILNXPGLXYXPVCNQVECHLYLN--QRXLLDYCESXDIVLVA 216 (324)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHhcCCeeEEEecCCcHHHHHHHHHhcCccCCceeeEeeeCcccc--hHHHHHHHHHcCCEEEE
Confidence 899999999999999999999999999999998864 2 7799999999887 46899999999999987
No 15
>3up8_A Putative 2,5-diketo-D-gluconic acid reductase B; nysgrc, PSI-biology, structural genomics; 1.96A {Sinorhizobium meliloti}
Probab=100.00 E-value=3.2e-47 Score=315.82 Aligned_cols=179 Identities=26% Similarity=0.482 Sum_probs=166.3
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
-|++++|| |++||.||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 23 ~m~~~~l~--g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 89 (298)
T 3up8_A 23 MMHAVSSN--GANIPALGFGTFRM--------SGAEVLRILPQALKLGFRHVDTAQIYG---NEAEVGEAIQKSGIPRAD 89 (298)
T ss_dssp SCCEECCT--TCCEESEEEECTTC--------CHHHHHHHHHHHHHHTCCEEECCTTTT---CHHHHHHHHHHHTCCGGG
T ss_pred cCceEEeC--CeecCCeeEECCcC--------CHHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHcCCChHH
Confidence 37999997 99999999999975 358899999999999999999999999 89999999986 47999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCC
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (211)
+||+||++.. +.+++.+++++++||++||+||||+|++|||++..+.+++|++|++|+++|+||+||||||
T Consensus 90 v~I~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~ 160 (298)
T 3up8_A 90 VFLTTKVWVD---------NYRHDAFIASVDESLRKLRTDHVDLLLLHWPGSDVPMAERIGALNEVRNAGKVRHIGISNF 160 (298)
T ss_dssp CEEEEEECGG---------GCSHHHHHHHHHHHHHHHTSSCEEEEEESCSCCSSCHHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEccCCCCCCHHHHHHHHHHHHHcCCccEEEEcCC
Confidence 9999999753 3479999999999999999999999999999988889999999999999999999999999
Q ss_pred CHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 166 SPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 166 ~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++++++++++.. +|+++|++||++.+ +.+++++|+++||+|+|
T Consensus 161 ~~~~l~~~~~~~~~~~~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a 205 (298)
T 3up8_A 161 NTTQMEEAARLSDAPIATNQVEYHPYLD--QTKVLQTARRLGMSLTS 205 (298)
T ss_dssp CHHHHHHHHHHCSSCEEEEEEECBTTBC--CHHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHhCCCCceEEEEecccccc--cHHHHHHHHHCCCEEEE
Confidence 999999998764 79999999999988 46899999999999987
No 16
>3o0k_A Aldo/keto reductase; ssgcid, ALS collaborative crystallography; 1.80A {Brucella melitensis biovar}
Probab=100.00 E-value=2.4e-47 Score=314.64 Aligned_cols=183 Identities=30% Similarity=0.406 Sum_probs=166.3
Q ss_pred cCCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CC
Q 028240 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LP 82 (211)
Q Consensus 5 ~~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~ 82 (211)
.+..|++++| ++|++||+||||||++ +++++.++++.|++.|||+||||+.|| +|+.+|++|++ .+
T Consensus 22 ~~~~m~~~~L-~~g~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~ 89 (283)
T 3o0k_A 22 MIMTVPTVKL-NDGNHIPQLGYGVWQI--------SNDEAVSAVSEALKAGYRHIDTATIYG---NEEGVGKAINGSGIA 89 (283)
T ss_dssp EECCCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHTSSSC
T ss_pred ccCCCceEEC-CCCCEECCeeEECccC--------CHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCC
Confidence 3467899999 7899999999999974 568999999999999999999999999 79999999996 47
Q ss_pred CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCcccEEE
Q 028240 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIG 161 (211)
Q Consensus 83 r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iG 161 (211)
|+++||+||++.. +.+++.+++++++||++||+||||+|++|||++. .+.+++|++|++|+++|+||+||
T Consensus 90 R~~~~i~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~~e~~~al~~l~~~Gkir~iG 160 (283)
T 3o0k_A 90 RADIFLTTKLWNS---------DQGYESTLKAFDTSLKKLGTDYVDLYLIHWPMPSKDLFMETWRAFIKLKEEGRVKSIG 160 (283)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTSSCEEEEEECCSCSCHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred cccEEEEEccCCC---------CCCHHHHHHHHHHHHHHhCCCceeEEEECCCCCCcccHHHHHHHHHHHHHCCCcceEE
Confidence 9999999999864 2378999999999999999999999999999876 45789999999999999999999
Q ss_pred eCCCCHHHHHHHhcc--CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 162 LSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 162 vs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
||||++++++++++. .++.++|++||++.+ +.+++++|+++||+|+|
T Consensus 161 vSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a 209 (283)
T 3o0k_A 161 VSNFRTADLERLIKESGVTPVLNQIELHPQFQ--QDELRLFHGKHDIATEA 209 (283)
T ss_dssp EESCCHHHHHHHHHHHSCCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEE
T ss_pred eccCcHHHHHHHHHhCCCCeEEEEeecCcccC--cHHHHHHHHHCCcEEEE
Confidence 999999999998765 467899999999987 45799999999999987
No 17
>2wzm_A Aldo-keto reductase; oxidoreductase; HET: NA7; 1.64A {Mycobacterium smegmatis} PDB: 2wzt_A
Probab=100.00 E-value=2e-47 Score=315.18 Aligned_cols=183 Identities=23% Similarity=0.377 Sum_probs=164.2
Q ss_pred cCCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CC
Q 028240 5 KKLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LP 82 (211)
Q Consensus 5 ~~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~ 82 (211)
.+..|++++| ++|++||+||||||+++ ++++.++|+.|++.||||||||+.|| +|+.+|++|++ .+
T Consensus 7 ~~~~m~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~v~~Al~~Gi~~iDTA~~Yg---~E~~lG~al~~~~~~ 74 (283)
T 2wzm_A 7 QAAAIPTVTL-NDDNTLPVVGIGVGELS--------DSEAERSVSAALEAGYRLIDTAAAYG---NEAAVGRAIAASGIP 74 (283)
T ss_dssp ---CCCEEEC-TTSCEEESEEEECTTCC--------HHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHTCCC
T ss_pred CCCCCceEEC-CCCCEEcceeEECCCCC--------hHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHhcCCC
Confidence 3456899999 89999999999999753 47899999999999999999999999 79999999985 57
Q ss_pred CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCcccEEE
Q 028240 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIG 161 (211)
Q Consensus 83 r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iG 161 (211)
|+++||+||++.. +.+++.+++++++||++||+||||+|++|||++. .+..++|++|++|+++|+||+||
T Consensus 75 R~~v~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iG 145 (283)
T 2wzm_A 75 RDEIYVTTKLATP---------DQGFTSSQAAARASLERLGLDYVDLYLIHWPGGDTSKYVDSWGGLMKVKEDGIARSIG 145 (283)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCTTCHHHHHHHHHHHHHHHHTTSEEEEE
T ss_pred cccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCCEeEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEE
Confidence 9999999999753 3478999999999999999999999999999874 45779999999999999999999
Q ss_pred eCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 162 LSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 162 vs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
||||++++++++++.. +|+++|++||++++. .+++++|+++||+|+|
T Consensus 146 vSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 194 (283)
T 2wzm_A 146 VCNFGAEDLETIVSLTYFTPAVNQIELHPLLNQ--AALREVNAGYNIVTEA 194 (283)
T ss_dssp EESCCHHHHHHHHHHHCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred EcCCCHHHHHHHHHhcCCCcccccccCCcccCC--HHHHHHHHHCCCEEEE
Confidence 9999999999998763 569999999999885 4799999999999987
No 18
>1hw6_A 2,5-diketo-D-gluconic acid reductase; aldo-keto reductase, TIM barrel, oxidoreductase; 1.90A {Corynebacterium SP} SCOP: c.1.7.1 PDB: 1a80_A* 1m9h_A*
Probab=100.00 E-value=1.5e-47 Score=315.23 Aligned_cols=180 Identities=24% Similarity=0.331 Sum_probs=161.0
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
.|++++| ++|++||+||||||+++ .+++.++++.|++.||||||||+.|| +|+.+|++|++ .+|++
T Consensus 2 ~M~~~~l-~~g~~v~~lglGt~~~~--------~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~~ 69 (278)
T 1hw6_A 2 TVPSIVL-NDGNSIPQLGYGVFKVP--------PADTQRAVEEALEVGYRHIDTAAIYG---NEEGVGAAIAASGIARDD 69 (278)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSCC--------GGGHHHHHHHHHHHTCCEEECGGGTT---CCHHHHHHHHHHCCCGGG
T ss_pred CCceEEC-CCCCccCCeeEECCcCC--------hHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHcCCChhh
Confidence 4899999 89999999999999763 36789999999999999999999999 79999999985 57999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
+||+||++.. +.+++.+++++++||++||+||||+|++|||++ ..+.+++|++|++|+++|+||+|||||
T Consensus 70 ~~i~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 140 (278)
T 1hw6_A 70 LFITTKLWND---------RHDGDEPAAAIAESLAKLALDQVDLYLVHWPTPAADNYVHAWEKMIELRAAGLTRSIGVSN 140 (278)
T ss_dssp CEEEEEECCC--------------CHHHHHHHHHHHHTCSCEEEEEECCCCTTCSSHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCEEEEEEcCCCCCCCCHHHHHHHHHHHHHcCCccEEEecC
Confidence 9999999753 347889999999999999999999999999987 367899999999999999999999999
Q ss_pred CCHHHHHHHhcc--CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++++++++++. .+|+++|++||++++. .+++++|+++||+|+|
T Consensus 141 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 186 (278)
T 1hw6_A 141 HLVPHLERIVAATGVVPAVNQIELHPAYQQ--REITDWAAAHDVKIES 186 (278)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhcCCCceeEEEEeCcccCC--HHHHHHHHHcCCEEEE
Confidence 999999998875 3569999999999985 5799999999999987
No 19
>1vbj_A Prostaglandin F synthase; TIM barrel, oxidoreductase; HET: NAP CIT; 2.10A {Trypanosoma brucei}
Probab=100.00 E-value=8.3e-47 Score=311.19 Aligned_cols=181 Identities=26% Similarity=0.364 Sum_probs=165.5
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCC
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRE 84 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~ 84 (211)
..|++++| ++|++||+||||||+++ +++++.++++.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 7 ~~m~~~~l-~~g~~v~~lglGt~~~~-------~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~R~ 75 (281)
T 1vbj_A 7 ALTQSLKL-SNGVMMPVLGFGMWKLQ-------DGNEAETATMWAIKSGYRHIDTAAIYK---NEESAGRAIASCGVPRE 75 (281)
T ss_dssp CCCCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSSSCGG
T ss_pred CCCceEEC-CCCCeecCeeEECCcCC-------CHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhcCCChh
Confidence 35899999 79999999999999864 347899999999999999999999999 79999999985 4799
Q ss_pred cEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 85 ~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
+++|+||++.. +.+++.+++++++||++||+||||+|++|||+ ..+..++|++|++|+++|+||+|||||
T Consensus 76 ~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~~lH~p~-~~~~~~~~~al~~l~~~Gkir~iGvSn 145 (281)
T 1vbj_A 76 ELFVTTKLWNS---------DQGYESTLSAFEKSIKKLGLEYVDLYLIHWPG-KDKFIDTWKAFEKLYADKKVRAIGVSN 145 (281)
T ss_dssp GCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCCC-SSCHHHHHHHHHHHHHTTSBSCEEEES
T ss_pred HEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEcCCC-CCCHHHHHHHHHHHHHCCCccEEEeeC
Confidence 99999999753 34799999999999999999999999999998 667899999999999999999999999
Q ss_pred CCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++++++++++.. +|+++|++||++++. .+++++|+++||+|+|
T Consensus 146 ~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 191 (281)
T 1vbj_A 146 FHEHHIEELLKHCKVAPMVNQIELHPLLNQ--KALCEYCKSKNIAVTA 191 (281)
T ss_dssp CCHHHHHHHHTSCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhCCCCceeeeEEeccccCC--HHHHHHHHHcCCEEEE
Confidence 9999999998864 579999999999884 5799999999999987
No 20
>1zgd_A Chalcone reductase; polyketide, deoxychalcone, isoflavonoid, biosynthesis, plant protein; HET: NAP; 1.70A {Medicago sativa}
Probab=100.00 E-value=3.1e-47 Score=318.20 Aligned_cols=187 Identities=26% Similarity=0.386 Sum_probs=164.2
Q ss_pred CCCCcCCCCCeee-cCC-CCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHH
Q 028240 1 MAEDKKLQVPRVK-LGT-QGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKAL 78 (211)
Q Consensus 1 m~~~~~~~~~~~~-lg~-~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l 78 (211)
|.+.. |++++ ||+ +|++||+|||||++++ .+++++.++|+.|++.||||||||+.|| +|+.+|++|
T Consensus 1 ~~~~~---m~~~~~l~~~tg~~v~~lglGt~~~~------~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---sE~~vG~al 68 (312)
T 1zgd_A 1 MGSVE---IPTKVLTNTSSQLKMPVVGMGSAPDF------TCKKDTKDAIIEAIKQGYRHFDTAAAYG---SEQALGEAL 68 (312)
T ss_dssp ----C---CCEEECTTSTTCCEEESBCBCCSCCT------TCCSCHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHH
T ss_pred CCCCC---CchhhhcCCCCCCCCCceeEcCcccC------CCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHH
Confidence 55555 89999 987 7999999999995432 1346788999999999999999999999 899999999
Q ss_pred hc------CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC---------------
Q 028240 79 KE------LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------- 137 (211)
Q Consensus 79 ~~------~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------- 137 (211)
++ .+|++++|+||++.. +.+++.+++++++||++||+||||+|++|||+.
T Consensus 69 ~~~~~~g~~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~ 139 (312)
T 1zgd_A 69 KEAIELGLVTRDDLFVTSKLWVT---------ENHPHLVIPALQKSLKTLQLDYLDLYLIHWPLSSQPGKFSFPIDVADL 139 (312)
T ss_dssp HHHHHTTSCCGGGCEEEEEECGG---------GCSGGGHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCCCSSEEGGGE
T ss_pred HHHHhcCCCcchheEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCceeEEEEeccCcccCcccccccccccc
Confidence 86 479999999999753 347899999999999999999999999999963
Q ss_pred -CCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 138 -SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 138 -~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
..+.+++|++|++|+++|+||+||||||++++++++++.. +|+++|++||++++. .+++++|+++||+|+|
T Consensus 140 ~~~~~~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 213 (312)
T 1zgd_A 140 LPFDVKGVWESMEESLKLGLTKAIGVSNFSVKKLENLLSVATVLPAVNQVEMNLAWQQ--KKLREFCNAHGIVLTA 213 (312)
T ss_dssp ECCCHHHHHHHHHHHHHTTSBSCEEEESCCHHHHHHHHTTCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred ccccHHHHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHhCCCCceEEeeecCcccCC--HHHHHHHHHcCCEEEE
Confidence 2467899999999999999999999999999999998875 789999999999884 5799999999999987
No 21
>3b3e_A YVGN protein; aldo-keto reductase, oxidoreductase; 1.80A {Bacillus subtilis} PDB: 3b3d_A
Probab=100.00 E-value=1.3e-46 Score=313.77 Aligned_cols=180 Identities=26% Similarity=0.366 Sum_probs=164.3
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
.|++++|+ +|++||+||||||+++ +++++.+++++|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 39 ~m~~~~L~-~g~~v~~lglGt~~~~-------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~R~~ 107 (310)
T 3b3e_A 39 LKDTVKLH-NGVEMPWFGLGVFKVE-------NGNEATESVKAAIKNGYRSIDTAAIYK---NEEGVGIGIKESGVAREE 107 (310)
T ss_dssp TTCEEECT-TSCEEESBCEECTTCC-------TTHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHSSSCGGG
T ss_pred ccceEECC-CCCeeCceeeeCCcCC-------CHHHHHHHHHHHHHcCCCEEECCCccC---CHHHHHHHHHhcCCCcce
Confidence 38999996 8999999999999863 458899999999999999999999999 79999999995 57999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCC
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA 165 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~ 165 (211)
+||+||++.. +.+++.+++++++||++||+||||+|++|||++.. .+++|++|++|+++||||+||||||
T Consensus 108 v~I~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~-~~e~~~al~~l~~~Gkir~iGvSn~ 177 (310)
T 3b3e_A 108 LFITSKVWNE---------DQGYETTLAAFEKSLERLQLDYLDLYLIHWPGKDK-YKDTWRALEKLYKDGKIRAIGVSNF 177 (310)
T ss_dssp CEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCCCSSC-HHHHHHHHHHHHHTTSEEEEEEESC
T ss_pred EEEEEeCCCC---------CCCHHHHHHHHHHHHHHhCCCeeEEEEeeCCCccc-HHHHHHHHHHHHHcCCcceEeecCC
Confidence 9999999764 34789999999999999999999999999998755 8899999999999999999999999
Q ss_pred CHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 166 SPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 166 ~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++++++++++.. +|.++|++||++.+. .+++++|+++||+|+|
T Consensus 178 ~~~~l~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 222 (310)
T 3b3e_A 178 QVHHLEELLKDAEIKPMVNQVEFHPRLTQ--KELRDYCKGQGIQLEA 222 (310)
T ss_dssp CHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEE
T ss_pred CHHHHHHHHHhcCCCcceeeeeccCccCC--HHHHHHHHHcCCEEEE
Confidence 999999998764 678999999999874 5899999999999987
No 22
>1afs_A 3-alpha-HSD, 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, NAD; HET: NAP TES; 2.50A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 1lwi_A*
Probab=100.00 E-value=8.5e-47 Score=316.90 Aligned_cols=184 Identities=27% Similarity=0.396 Sum_probs=165.1
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------ 80 (211)
..|++++| ++|++||+||||||+++. .+++++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~g~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 73 (323)
T 1afs_A 3 SISLRVAL-NDGNFIPVLGFGTTVPEK-----VAKDEVIKATKIAIDNGFRHFDSAYLYE---VEEEVGQAIRSKIEDGT 73 (323)
T ss_dssp GGGCEEEC-TTSCEEESSEEECCCCTT-----SCTTHHHHHHHHHHHTTCCEEECCTTTT---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCeECCeeEecccCCC-----CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHHhcCC
Confidence 45789999 799999999999998752 4568899999999999999999999999 79999999986
Q ss_pred CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCH
Q 028240 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (211)
Q Consensus 81 ~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~ 141 (211)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~~~~~~~~~~~ 144 (323)
T 1afs_A 74 VKREDIFYTSKLWST---------FHRPELVRTCLEKTLKSTQLDYVDLYIIHFPMALQPGDIFFPRDEHGKLLFETVDI 144 (323)
T ss_dssp CCGGGCEEEEEECGG---------GCSTTTHHHHHHHHHHHHCCSSEEEEEESCSCEECSSSSSSCBCTTCCBCEECCCH
T ss_pred CChHHeEEEEecCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEecCcCcCCCCcccCcccccccccccCCCH
Confidence 579999999999753 236889999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC----CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+++|++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 215 (323)
T 1afs_A 145 CDTWEAMEKCKDAGLAKSIGVSNFNCRQLERILNKPGLKYKPVCNQVECHLYLNQ--SKMLDYCKSKDIILVS 215 (323)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHHcCCcCEEEeeCCCHHHHHHHHHhcCcCCCCEEEeeccccccch--HHHHHHHHHcCCEEEE
Confidence 899999999999999999999999999999998864 569999999998874 5799999999999987
No 23
>3buv_A 3-OXO-5-beta-steroid 4-dehydrogenase; 5-beta-reductase, catalytic tetrad, hepes, NADP, bIle catabolism, disease mutation, lipid metabolism; HET: NAP EPE; 1.35A {Homo sapiens} PDB: 3bur_A* 3bv7_A* 3caq_A* 3cas_A* 3cav_A* 3g1r_A* 3cot_A* 3dop_A* 3cmf_A* 3uzx_A* 3uzw_A* 3uzy_A* 3uzz_A*
Probab=100.00 E-value=1.6e-46 Score=315.53 Aligned_cols=184 Identities=23% Similarity=0.332 Sum_probs=165.5
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------C
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------L 81 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~ 81 (211)
.+++++| ++|++||.||||||++++ ..+++++.++|+.|++.|||+||||+.|| +|+.+|++|++ .
T Consensus 6 ~~~~~~L-~tg~~v~~lglGt~~~g~----~~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~ 77 (326)
T 3buv_A 6 ASHRIPL-SDGNSIPIIGLGTYSEPK----STPKGACATSVKVAIDTGYRHIDGAYIYQ---NEHEVGEAIREKIAEGKV 77 (326)
T ss_dssp SCCEEEC-TTSCEEESBCEECCCCGG----GCCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSC
T ss_pred CCCeEEC-CCCCeeCCeeEcccCCCC----CCCHHHHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHHhcCCC
Confidence 4688999 799999999999998763 24668899999999999999999999999 79999999986 5
Q ss_pred CCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCHH
Q 028240 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIE 142 (211)
Q Consensus 82 ~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~ 142 (211)
+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..++.
T Consensus 78 ~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~ 148 (326)
T 3buv_A 78 RREDIFYCGKLWAT---------NHVPEMVRPTLERTLRVLQLDYVDLYIIEVPMAFKPGDEIYPRDENGKWLYHKSNLC 148 (326)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESCSCCBCCSSCSSCBCTTCCBCBCCCCHH
T ss_pred ChhHeEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEccCCccCCccccCccccccccccccccHH
Confidence 79999999999753 247899999999999999999999999999964 23678
Q ss_pred HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--C--ceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--P--ITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~--~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++|++|++|+++|+||+||||||++++++++++.. + |+++|++||++.+. .+++++|+++||+|+|
T Consensus 149 e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 218 (326)
T 3buv_A 149 ATWEAMEACKDAGLVKSLGVSNFNRRQLELILNKPGLKHKPVSNQVECHPYFTQ--PKLLKFCQQHDIVITA 218 (326)
T ss_dssp HHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhCCCCCCCeeeeeecccccCc--HHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999998864 3 77999999998874 5799999999999987
No 24
>1mi3_A Xylose reductase, XR; aldo-keto reductase, beta-alpha barrel, dimer, oxidoreductase; HET: NAD; 1.80A {Candida tenuis} SCOP: c.1.7.1 PDB: 1jez_A* 1k8c_A* 1ye6_A* 1ye4_A* 1sm9_A* 1r38_A* 1z9a_A*
Probab=100.00 E-value=2.4e-46 Score=314.11 Aligned_cols=181 Identities=27% Similarity=0.451 Sum_probs=163.6
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------ 80 (211)
..|++++| ++|++||+||||||+ .+++++.++|+.|++.||||||||+.|| +|+.+|++|++
T Consensus 3 ~~m~~~~L-~tg~~v~~lglGt~~--------~~~~~~~~~v~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 70 (322)
T 1mi3_A 3 ASIPDIKL-SSGHLMPSIGFGCWK--------LANATAGEQVYQAIKAGYRLFDGAEDYG---NEKEVGDGVKRAIDEGL 70 (322)
T ss_dssp -CCCEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTS
T ss_pred CCCceEEC-CCCCEECCeeeeCCc--------CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCC
Confidence 56899999 799999999999986 3678999999999999999999999999 79999999986
Q ss_pred CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-----------------------
Q 028240 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT----------------------- 137 (211)
Q Consensus 81 ~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~----------------------- 137 (211)
.+|+++||+||++.. ..+++.+++++++||++||+||||+|++|||+.
T Consensus 71 ~~R~~~~i~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~d~~~~~~~~~~ 141 (322)
T 1mi3_A 71 VKREEIFLTSKLWNN---------YHDPKNVETALNKTLADLKVDYVDLFLIHFPIAFKFVPIEEKYPPGFYCGDGNNFV 141 (322)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCCTTTCSSCTTCCSSTTCCC
T ss_pred CChhhEEEEEeeCCC---------CCCHHHHHHHHHHHHHHhCCCCeeeEEEecCcccccCccccccccccccccccccc
Confidence 479999999999753 247999999999999999999999999999942
Q ss_pred --CCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 138 --SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 138 --~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
..+++++|++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 142 ~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 216 (322)
T 1mi3_A 142 YEDVPILETWKALEKLVAAGKIKSIGVSNFPGALLLDLLRGATIKPAVLQVEHHPYLQQ--PKLIEFAQKAGVTITA 216 (322)
T ss_dssp BCCCCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred ccCCCHHHHHHHHHHHHHcCCcCEEEEcCCCHHHHHHHHHhCCCCceEeecccCcCcCc--HHHHHHHHHcCCEEEE
Confidence 2357899999999999999999999999999999998764 589999999999874 5799999999999987
No 25
>4f40_A Prostaglandin F2-alpha synthase/D-arabinose dehyd; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: CIT; 1.60A {Leishmania major} PDB: 4g5d_A*
Probab=100.00 E-value=2.1e-46 Score=309.96 Aligned_cols=181 Identities=24% Similarity=0.358 Sum_probs=164.7
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
..++.+| ++|++||+||||||+++. ++++.++++.|++.||||||||+.|| +|+.+|++|++ .+|++
T Consensus 9 ~~~~~~l-~~g~~v~~lglGt~~~~~-------~~~~~~~v~~Al~~G~~~~DTA~~Yg---~E~~vG~al~~~~~~R~~ 77 (288)
T 4f40_A 9 DKAMVTL-SNGVKMPQFGLGVWQSPA-------GEVTENAVKWALCAGYRHIDTAAIYK---NEESVGAGLRASGVPRED 77 (288)
T ss_dssp TTCEEEC-TTSCEEESBCEECTTCCT-------THHHHHHHHHHHHTTCCEEECCGGGT---CHHHHHHHHHHHTCCGGG
T ss_pred cCCeEEC-CCCCeecceeEECCcCCC-------cHHHHHHHHHHHHcCCCeEECccccc---CHHHHHHHHHhcCCChhh
Confidence 3678889 899999999999998753 38899999999999999999999999 89999999986 57999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCC-------CCHHHHHHHHHHHHHcCccc
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIK 158 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir 158 (211)
+||+||++.. +.+++.+++++++||++||+||||+|++|||+.. .+..++|++|++|+++|+||
T Consensus 78 ~~I~TK~~~~---------~~~~~~i~~~~~~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~e~~~al~~l~~~Gkir 148 (288)
T 4f40_A 78 VFITTKLWNT---------EQGYESTLAAFEESRQKLGVDYIDLYLIHWPRGKDILSKEGKKYLDSWRAFEQLYKEKKVR 148 (288)
T ss_dssp CEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCCCCHHHHHHHCCHHHHHHHHHHHHHHTTSEE
T ss_pred EEEEEecCCC---------cCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCCCcccccccccHHHHHHHHHHHHHcCCcc
Confidence 9999999764 3478999999999999999999999999999863 55789999999999999999
Q ss_pred EEEeCCCCHHHHHHHhcc--CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 159 YIGLSEASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 159 ~iGvs~~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+||||||++++++++++. .+|+++|++||++++. .+++++|+++||+|+|
T Consensus 149 ~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gi~v~a 200 (288)
T 4f40_A 149 AIGVSNFHIHHLEDVLAMCTVTPMVNQVELHPLNNQ--ADLRAFCDAKQIKVEA 200 (288)
T ss_dssp EEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred EEEeccCCHHHHHHHHHhCCCCCeEEeccCccccCC--HHHHHHHHHCCCEEEE
Confidence 999999999999999876 4689999999999985 5799999999999987
No 26
>3o3r_A Aldo-keto reductase family 1, member B7; aldose reductase like protein, AKR1B14, oxidoreductase; HET: NAP; 1.86A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 3qkz_A*
Probab=100.00 E-value=3.6e-46 Score=312.27 Aligned_cols=178 Identities=23% Similarity=0.339 Sum_probs=161.2
Q ss_pred CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------CCC
Q 028240 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (211)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~~r 83 (211)
++++| ++|++||.||||||++ +++++.++|++|++.||||||||+.|| +|+.+|++|++ .+|
T Consensus 3 ~~~~l-~tg~~v~~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~lG~al~~~~~~~~~~R 70 (316)
T 3o3r_A 3 TFVKL-RTKAKMPLVGLGTWKS--------PPGQVKEAVKAAIDAGYRHFDCAYVYQ---NESEVGEAIQEKIKEKAVRR 70 (316)
T ss_dssp CEEEC-TTSCEEESBEEBCTTC--------CTTHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHHHTTSCCG
T ss_pred CeEEC-CCCCEeCCeeeECCcC--------CcHHHHHHHHHHHHcCCCEEEccCccC---CHHHHHHHHHHHHhhCCCCh
Confidence 56778 8999999999999863 447889999999999999999999999 89999999986 579
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCC-------------------CCCCHHHH
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD-------------------TSVPIEET 144 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~-------------------~~~~~~~~ 144 (211)
+++||+||++... .+++.+++++++||++||+||||+|++|||+ ...+++++
T Consensus 71 ~~v~I~TK~~~~~---------~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 3o3r_A 71 EDLFIVSKLWSTF---------FEKSLMKEAFQKTLSDLKLDYLDLYLIHWPQGLQAGKEFLPKDSQGKVLMSKSTFLDA 141 (316)
T ss_dssp GGCEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEESCSSCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred HHcEEEeeeCCCc---------CCHHHHHHHHHHHHHHcCCCeeeEEEEcCCccccCcccccccccccccccccccHHHH
Confidence 9999999997642 3789999999999999999999999999996 34678899
Q ss_pred HHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC----CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+ +.+++++|+++||+|+|
T Consensus 142 ~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~--~~~l~~~~~~~gi~v~a 209 (316)
T 3o3r_A 142 WEGMEELVDQGLVKALGVSNFNHFQIERLLNKPGLKHKPVTNQVECHPYLT--QEKLIQYCHSKGIAVIA 209 (316)
T ss_dssp HHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCSCCCEEEEECBTTBC--CHHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHHcCCCcEEEEecCCHHHHHHHHHhCCCCCCceEeeccCCcccc--hHHHHHHHHHcCCEEEE
Confidence 999999999999999999999999999998754 48999999999887 46899999999999987
No 27
>1s1p_A Aldo-keto reductase family 1 member C3; TIM-barrel, oxidoreductase; HET: NAP; 1.20A {Homo sapiens} SCOP: c.1.7.1 PDB: 1s1r_A* 1s2a_A* 1s2c_A* 3uwe_A* 3r58_A* 3r43_A* 3r7m_A* 3r6i_A* 3r8h_A* 3r94_A* 3r8g_A* 1zq5_A* 1ry8_A* 1xf0_A* 1ry0_A* 2f38_A* 2fgb_A* 4dbs_A* 4dbu_A* 3gug_A* ...
Probab=100.00 E-value=3.9e-46 Score=313.84 Aligned_cols=184 Identities=24% Similarity=0.367 Sum_probs=163.5
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------ 80 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------ 80 (211)
+.+++++| ++|++||+||||||+++. .+++++.++|+.|++.|||+||||+.|| +|+.+|++|++
T Consensus 3 ~~~~~~~L-~tg~~v~~lglGt~~~~~-----~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~~~ 73 (331)
T 1s1p_A 3 SKQQCVKL-NDGHFMPVLGFGTYAPPE-----VPRSKALEVTKLAIEAGFRHIDSAHLYN---NEEQVGLAIRSKIADGS 73 (331)
T ss_dssp ---CEEEC-TTSCEEESEEEECCCCTT-----SCTTHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTS
T ss_pred CCCCeEEC-CCCCEeCCeeEcCccCCC-----CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHHhcCC
Confidence 45688999 799999999999998742 4668899999999999999999999999 79999999986
Q ss_pred CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCH
Q 028240 81 LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPI 141 (211)
Q Consensus 81 ~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~ 141 (211)
.+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..++
T Consensus 74 ~~R~~~~I~TK~~~~---------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~d~~g~~~~~~~~~ 144 (331)
T 1s1p_A 74 VKREDIFYTSKLWST---------FHRPELVRPALENSLKKAQLDYVDLYLIHSPMSLKPGEELSPTDENGKVIFDIVDL 144 (331)
T ss_dssp CCGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEECCSCCBCCSSCSSCBCTTSCBCBCCCCH
T ss_pred CCchheEEEeccCCc---------cCCHHHHHHHHHHHHHHhCCCcEEEEEeccCcccCCCcccCCccccccccccccCH
Confidence 579999999999753 247899999999999999999999999999942 2367
Q ss_pred HHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC----CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 142 EETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 142 ~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+++|++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 145 ~e~~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 215 (331)
T 1s1p_A 145 CTTWEAMEKCKDAGLAKSIGVSNFNRRQLEMILNKPGLKYKPVCNQVECHPYFNR--SKLLDFCKSKDIVLVA 215 (331)
T ss_dssp HHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHTCTTCCCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHcCCccEEEEeCCCHHHHHHHHHhcCccCCCceeeeecCCCcCh--HHHHHHHHHcCCEEEE
Confidence 899999999999999999999999999999998864 569999999998874 5799999999999987
No 28
>1gve_A Aflatoxin B1 aldehyde reductase member 3; oxidoreductase, aldo-keto reductase, succinic semialdehyde oxidoreductase, AKR7 family; HET: NAP CIT; 1.38A {Rattus norvegicus} SCOP: c.1.7.1 PDB: 2clp_A* 2c91_A*
Probab=100.00 E-value=2.4e-46 Score=314.66 Aligned_cols=181 Identities=27% Similarity=0.298 Sum_probs=163.2
Q ss_pred ccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcC--CCCcEEEEeccccccC
Q 028240 20 EVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKEL--PRENIQVATKFGFVEL 97 (211)
Q Consensus 20 ~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~--~r~~~~i~tK~~~~~~ 97 (211)
.+|+||||||++|. ..+++++.++|+.|++.||||||||+.||.|.+|+.+|++|+.. .|++++|+||++...
T Consensus 4 ~~~~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gi~~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~~~i~TK~~~~~- 78 (327)
T 1gve_A 4 ARPATVLGAMEMGR----RMDVTSSSASVRAFLQRGHTEIDTAFVYANGQSETILGDLGLGLGRSGCKVKIATKAAPMF- 78 (327)
T ss_dssp CCCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHTTSCCCTTSTTCCSEEEEEECSCT-
T ss_pred CCCCeEEcccccCC----CCCHHHHHHHHHHHHHcCCCEEEchhhcCCCchHHHHHHHHhhcCCCCCeEEEEEEECCCC-
Confidence 46899999999874 25789999999999999999999999999999999999999852 377899999996421
Q ss_pred CCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc-
Q 028240 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV- 176 (211)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~- 176 (211)
..+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||++++++++++.
T Consensus 79 -----~~~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~ 153 (327)
T 1gve_A 79 -----GKTLKPADVRFQLETSLKRLQCPRVDLFYLHFPDHGTPIEETLQACHQLHQEGKFVELGLSNYVSWEVAEICTLC 153 (327)
T ss_dssp -----TCCSSHHHHHHHHHHHHHHTTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHHHHHHHH
T ss_pred -----CCCCCHHHHHHHHHHHHHHHCCCeEeEEEecCCCCCCCHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHH
Confidence 12458999999999999999999999999999999888999999999999999999999999999999887654
Q ss_pred -----CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 177 -----HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 177 -----~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
.+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 154 ~~~g~~~~~~~Q~~~~~~~~~~e~~l~~~~~~~gi~v~a 192 (327)
T 1gve_A 154 KKNGWIMPTVYQGMYNAITRQVETELFPCLRHFGLRFYA 192 (327)
T ss_dssp HHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEE
T ss_pred HHcCCCCeEEEeccCcceecccHHHHHHHHHHcCCeEEE
Confidence 5689999999999998777899999999999987
No 29
>2bp1_A Aflatoxin B1 aldehyde reductase member 2; oxidoreductase, aldo-keto reductase family 7, SSA reductase, barrel; HET: FLC NDP; 2.4A {Homo sapiens}
Probab=100.00 E-value=2.9e-46 Score=317.88 Aligned_cols=187 Identities=25% Similarity=0.293 Sum_probs=162.4
Q ss_pred cCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCcEEEEec
Q 028240 14 LGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPRENIQVATK 91 (211)
Q Consensus 14 lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~~~i~tK 91 (211)
.+..+..+|+||||||++|+ ..+++++.++|+.|++.||||||||+.||.|.+|+.+|++|++ ..|++++|+||
T Consensus 31 ~~~~~~~ip~lglGt~~~g~----~~~~~~~~~~l~~Al~~Gin~~DTA~~Yg~G~sE~~lG~al~~~~~~r~~v~I~TK 106 (360)
T 2bp1_A 31 MSRPPPPRVASVLGTMEMGR----RMDAPASAAAVRAFLERGHTELDTAFMYSDGQSETILGGLGLGLGGGDCRVKIATK 106 (360)
T ss_dssp -------CCEEEEECTTBTT----TBCHHHHHHHHHHHHHTTCCEEECCTTGGGGHHHHHHHTSCCCTTSTTCCCEEEEE
T ss_pred cCCCCCCCCCEEECchhhCC----CCCHHHHHHHHHHHHHcCCCEEECccccCCCChHHHHHHHHhhccCCCCeEEEEee
Confidence 34557789999999999874 2478999999999999999999999999999999999999973 12557999999
Q ss_pred cccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHH
Q 028240 92 FGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIR 171 (211)
Q Consensus 92 ~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~ 171 (211)
++.... .+.+++.+++++++||++||+||||+|++|||+...+++++|++|++|+++||||+||||||+.++++
T Consensus 107 ~~~~~~------~~~~~~~i~~~~e~SL~rLg~dyiDl~~lH~p~~~~~~~e~~~aL~~l~~~Gkir~iGvSn~~~~~l~ 180 (360)
T 2bp1_A 107 ANPWDG------KSLKPDSVRSQLETSLKRLQCPQVDLFYLHAPDHGTPVEETLHACQRLHQEGKFVELGLSNYASWEVA 180 (360)
T ss_dssp ECCCTT------CCSSHHHHHHHHHHHHHHHTCSCEEEEEECSCCTTSCHHHHHHHHHHHHHTTSEEEEEEESCCHHHHH
T ss_pred ecCCCC------CCCCHHHHHHHHHHHHHHhCCCeEeEEEecCCCCCCCHHHHHHHHHHHHHCCCccEEEEeCCCHHHHH
Confidence 964311 24689999999999999999999999999999988889999999999999999999999999999998
Q ss_pred HHhcc------CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 172 RAHAV------HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 172 ~~~~~------~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++++. .+|+++|++||++++..+.+++++|+++||+|+|
T Consensus 181 ~~~~~~~~~g~~~~~~~Q~~yn~~~~~~e~~l~~~~~~~gi~v~a 225 (360)
T 2bp1_A 181 EICTLCKSNGWILPTVYQGMYNATTRQVETELFPCLRHFGLRFYA 225 (360)
T ss_dssp HHHHHHHHHTCCCEEEEEEECBTTBCGGGTTHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCCceEEeeccchhhccchhhHHHHHHHcCCeEEE
Confidence 87654 5689999999999998777899999999999987
No 30
>3h7u_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.25A {Arabidopsis thaliana}
Probab=100.00 E-value=2.1e-46 Score=315.84 Aligned_cols=182 Identities=25% Similarity=0.366 Sum_probs=164.1
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-----
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----- 80 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~----- 80 (211)
...|++++|+ +|++||+||||||+ .+++++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 22 ~~~m~~~~L~-tg~~v~~lglGt~~--------~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g 89 (335)
T 3h7u_A 22 ANAITFFKLN-TGAKFPSVGLGTWQ--------ASPGLVGDAVAAAVKIGYRHIDCAQIYG---NEKEIGAVLKKLFEDR 89 (335)
T ss_dssp --CCCEEECT-TSCEEESBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTT
T ss_pred ccCCceEEcC-CCCEecceeEeCCc--------CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHHHHhcC
Confidence 3468999995 99999999999986 3678999999999999999999999999 89999999985
Q ss_pred -CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC--------------CCCHHHHH
Q 028240 81 -LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETI 145 (211)
Q Consensus 81 -~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~~~~~~~~ 145 (211)
.+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|
T Consensus 90 ~~~R~~v~I~TK~~~~---------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~ 160 (335)
T 3h7u_A 90 VVKREDLFITSKLWCT---------DHDPQDVPEALNRTLKDLQLEYVDLYLIHWPARIKKGSVGIKPENLLPVDIPSTW 160 (335)
T ss_dssp SCCGGGCEEEEEECGG---------GCSTTHHHHHHHHHHHHHTCSCBSEEEECSSCEECSSCSSCCGGGEECCCHHHHH
T ss_pred CCCcceeEEEeeeCCC---------CCCHHHHHHHHHHHHHHcCCCceeEEEEcCCCccccccccccccccccCCHHHHH
Confidence 379999999999753 347899999999999999999999999999964 24678999
Q ss_pred HHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 146 GEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 146 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++|++|+++||||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 161 ~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 225 (335)
T 3h7u_A 161 KAMEALYDSGKARAIGVSNFSTKKLADLLELARVPPAVNQVECHPSWRQ--TKLQEFCKSKGVHLSA 225 (335)
T ss_dssp HHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCccEEEecCCCHHHHHHHHHhCCCCeEEEecccccccCC--HHHHHHHHHCCCEEEE
Confidence 99999999999999999999999999988754 679999999999884 5799999999999987
No 31
>4gie_A Prostaglandin F synthase; structural genomics, niaid, national institute of allergy AN infectious diseases; HET: NAP; 1.25A {Trypanosoma cruzi} PDB: 4fzi_A*
Probab=100.00 E-value=5.1e-46 Score=307.84 Aligned_cols=182 Identities=25% Similarity=0.358 Sum_probs=160.8
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCC
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPR 83 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r 83 (211)
+..|+|++| ++|++||.||||||+++ +++++.++|++|+++||||||||+.|| +|+.+|++++. .+|
T Consensus 10 ~~~~~~v~L-n~G~~ip~lGlGtw~~~-------d~~e~~~~v~~Al~~Gin~~DTA~~Yg---sE~~vG~~l~~~~~~r 78 (290)
T 4gie_A 10 NCNYNCVTL-HNSVRMPQLGLGVWRAQ-------DGAETANAVRWAIEAGYRHIDTAYIYS---NERGVGQGIRESGVPR 78 (290)
T ss_dssp SSSSCEEEC-TTSCEEESBCEECTTCC-------TTHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHCCCG
T ss_pred CCCCCEEEc-CCCCCccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEecccccC---CHHHHHHHHHhcCCcc
Confidence 456799999 89999999999999753 457899999999999999999999999 89999999986 578
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (211)
++++|+||++... .+++.+++++++||+|||+||||+|++|||+. .+..++|++|++|+++||||+||||
T Consensus 79 ~~~~i~tk~~~~~---------~~~~~~~~~~e~SL~rL~~dyiDly~lH~p~~-~~~~e~~~al~~l~~~Gkir~iGvS 148 (290)
T 4gie_A 79 EEVWVTTKVWNSD---------QGYEKTLAAFERSRELLGLEYIDLYLIHWPGK-KKFVDTWKALEKLYEEKKVRAIGVS 148 (290)
T ss_dssp GGSEEEEEECGGG---------CSHHHHHHHHHHHHHHHTCSCEEEEEECCCCS-SSHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred hhccccccccccC---------CChHHHHHHHHHHHHHhCCCceeeEEecCCCC-CcchHHHHHHHHHHHCCCcceeeec
Confidence 9999999997643 37899999999999999999999999999975 5688999999999999999999999
Q ss_pred CCCHHHHHHHhccCC--ceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 164 EASPDTIRRAHAVHP--ITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 164 ~~~~~~l~~~~~~~~--~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
||++++++++..... +.++|++++...+ +.+++++|+++||+++|
T Consensus 149 n~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a 195 (290)
T 4gie_A 149 NFEPHHLTELFKSCKIRPMVNQVELHPLFQ--QRTLREFCKQHNIAITA 195 (290)
T ss_dssp SCCHHHHHHHHTTCSSCCSEEEEECBTTBC--CHHHHHHHHHTTCEEEE
T ss_pred CCCHHHHHHHHHhccCCCceeeEeccccch--hHHHHHHHHHcCceEee
Confidence 999999999988764 4556655555444 66899999999999987
No 32
>1vp5_A 2,5-diketo-D-gluconic acid reductase; TM1009, structural genomics, joint center for structural genomics, PSI, protein structure initiative; HET: NAP; 2.40A {Thermotoga maritima} SCOP: c.1.7.1
Probab=100.00 E-value=8e-46 Score=307.40 Aligned_cols=176 Identities=27% Similarity=0.376 Sum_probs=160.3
Q ss_pred eeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------CCCC
Q 028240 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPRE 84 (211)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~~r~ 84 (211)
.+.+|++|++||+||||||++ +.+++.++++.|++.|||+||||+.|| +|+.+|++|++ .+|+
T Consensus 16 ~~~~~~tg~~v~~lglGt~~~--------~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R~ 84 (298)
T 1vp5_A 16 PKVTLNNGVEMPILGYGVFQI--------PPEKTEECVYEAIKVGYRLIDTAASYM---NEEGVGRAIKRAIDEGIVRRE 84 (298)
T ss_dssp CEEECTTSCEEESBCEECTTC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSCCGG
T ss_pred ceEeCCCCCCccCeeEeCCcC--------ChHHHHHHHHHHHHcCCCEEECCCccc---CHHHHHHHHHHhhhccCCChh
Confidence 345779999999999999875 347899999999999999999999999 79999999984 4799
Q ss_pred cEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 85 ~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
+++|+||++.. +.+++.+++++++||++||+||||+|++|||++ +..++|++|++|+++|+||+|||||
T Consensus 85 ~v~I~TK~~~~---------~~~~~~v~~~~~~SL~rLg~dyiDl~llH~p~~--~~~e~~~al~~l~~~Gkir~iGvSn 153 (298)
T 1vp5_A 85 ELFVTTKLWVS---------DVGYESTKKAFEKSLKKLQLEYIDLYLIHQPFG--DVHCAWKAMEEMYKDGLVRAIGVSN 153 (298)
T ss_dssp GCEEEEEECGG---------GCSSHHHHHHHHHHHHHHTCSCEEEEEECSSCS--CHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred hEEEEeccCCC---------CCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCC--CHHHHHHHHHHHHHcCCccEEEecC
Confidence 99999999753 347899999999999999999999999999986 7889999999999999999999999
Q ss_pred CCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++++++++++.. +|+++|++||++++. .+++++|+++||+|+|
T Consensus 154 ~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 199 (298)
T 1vp5_A 154 FYPDRLMDLMVHHEIVPAVNQIEIHPFYQR--QEEIEFMRNYNIQPEA 199 (298)
T ss_dssp CCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhCCCCceEEEEecccccCC--HHHHHHHHHCCCEEEE
Confidence 9999999998864 569999999999985 5799999999999987
No 33
>1qwk_A Aldose reductase, aldo-keto reductase family 1 member C1, XH961; structural genomics, PSI, protein structure initiative; 1.60A {Caenorhabditis elegans} SCOP: c.1.7.1
Probab=100.00 E-value=5.7e-46 Score=311.13 Aligned_cols=178 Identities=30% Similarity=0.492 Sum_probs=162.5
Q ss_pred CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------CCC
Q 028240 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (211)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~~r 83 (211)
++++| ++|++||+||||||+ .+++++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 6 ~~~~l-~~g~~vs~lglGt~~--------~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~~~~~R 73 (317)
T 1qwk_A 6 ASIKL-SNGVEMPVIGLGTWQ--------SSPAEVITAVKTAVKAGYRLIDTASVYQ---NEEAIGTAIKELLEEGVVKR 73 (317)
T ss_dssp CEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHTSCCG
T ss_pred ceEEC-CCCCEeCCeeEECCc--------CCHHHHHHHHHHHHHcCCCEEEcccccc---CHHHHHHHHHHHhhcCCCCh
Confidence 78899 699999999999986 3678999999999999999999999999 79999999986 589
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC---------CCCHHHHHHHHHHHHHc
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------SVPIEETIGEMKKLVEE 154 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~---------~~~~~~~~~~l~~l~~~ 154 (211)
++++|+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|++|++|+++
T Consensus 74 ~~~~i~TK~~~~---------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~e~~~al~~l~~~ 144 (317)
T 1qwk_A 74 EELFITTKAWTH---------ELAPGKLEGGLRESLKKLQLEYVDLYLAHMPAAFNDDMSEHIASPVEDVWRQFDAVYKA 144 (317)
T ss_dssp GGCEEEEEECTT---------TSSTTTHHHHHHHHHHHHTCSCBSEEEESCSCEECTTSCSEECCCHHHHHHHHHHHHHT
T ss_pred hheEEEeeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeEEEEeccCccccccccccCCCHHHHHHHHHHHHHc
Confidence 999999999753 237889999999999999999999999999974 34688999999999999
Q ss_pred CcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 155 GKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 155 G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 145 Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 200 (317)
T 1qwk_A 145 GLAKAVGVSNWNNDQISRALALGLTPVHNSQVELHLYFPQ--HDHVDFCKKHNISVTS 200 (317)
T ss_dssp TSBSSEEEESCCHHHHHHHHTTCSSCCCEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred CCeeEEEecCCCHHHHHHHHHhcCCccceecceeccccCc--HHHHHHHHHcCCEEEE
Confidence 99999999999999999998864 579999999999874 5799999999999987
No 34
>1us0_A Aldose reductase; oxidoreductase, NADP, IDD594; HET: NDP LDT CIT; 0.66A {Homo sapiens} SCOP: c.1.7.1 PDB: 1pwl_A* 1t41_A* 1pwm_A* 1x96_A* 1x97_A* 1x98_A* 1z89_A* 1z8a_A* 2dux_A* 2duz_A* 2dv0_A* 2fz8_A* 2fz9_A* 2fzb_A* 2fzd_A* 2hv5_A* 2hvn_A* 2hvo_A* 2i16_A* 2i17_A* ...
Probab=100.00 E-value=1.7e-45 Score=308.19 Aligned_cols=178 Identities=25% Similarity=0.393 Sum_probs=161.3
Q ss_pred CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------CCC
Q 028240 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (211)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~~r 83 (211)
++++| ++|++||+||||||+ .+++++.++|+.|++.|||+||||+.|| +|+.+|++|++ .+|
T Consensus 3 ~~~~l-~tg~~v~~lglGt~~--------~~~~~~~~~l~~Al~~G~~~iDTA~~Yg---~E~~vG~al~~~~~~g~~~R 70 (316)
T 1us0_A 3 SRILL-NNGAKMPILGLGTWK--------SPPGQVTEAVKVAIDVGYRHIDCAHVYQ---NENEVGVAIQEKLREQVVKR 70 (316)
T ss_dssp SEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHTTSSCG
T ss_pred ceEEC-CCCCEECCEeEECCc--------CCHHHHHHHHHHHHHcCCCEEEcccccC---CHHHHHHHHHHHHhcCCCCh
Confidence 46788 799999999999986 3678999999999999999999999999 79999999986 479
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCHHHH
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEET 144 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~~ 144 (211)
++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+++++
T Consensus 71 ~~~~I~TK~~~~---------~~~~~~v~~~~~~SL~rL~~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e~ 141 (316)
T 1us0_A 71 EELFIVSKLWCT---------YHEKGLVKGACQKTLSDLKLDYLDLYLIHWPTGFKPGKEFFPLDESGNVVPSDTNILDT 141 (316)
T ss_dssp GGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESSSCCBCCSSCSSCBCTTSCBCBCSCCHHHH
T ss_pred hHeEEEEeeCCC---------cCCHHHHHHHHHHHHHHhCCCceeeEEEecCccccccccccccccccccccccccHHHH
Confidence 999999999753 347899999999999999999999999999963 2367899
Q ss_pred HHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC----CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH----PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 142 ~~ale~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~p~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 209 (316)
T 1us0_A 142 WAAMEELVDEGLVKAIGISNFNHLQVEMILNKPGLKYKPAVNQIECHPYLTQ--EKLIQYCQSKGIVVTA 209 (316)
T ss_dssp HHHHHHHHHTTSBSCEEEESCCHHHHHHHHTCTTCCSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCccEEEEecCCHHHHHHHHHhCcccCCceeeehhcCCccCC--HHHHHHHHHcCCEEEE
Confidence 999999999999999999999999999998864 569999999998874 5799999999999987
No 35
>1mzr_A 2,5-diketo-D-gluconate reductase A; alpha/beta-barrel, aldo-ketoreductase, NADPH dependant, BACT targets at IGS-CNRS, france, BIGS; 2.13A {Escherichia coli} SCOP: c.1.7.1
Probab=100.00 E-value=1.2e-45 Score=306.00 Aligned_cols=178 Identities=28% Similarity=0.336 Sum_probs=162.1
Q ss_pred CCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc--CCCCc
Q 028240 8 QVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE--LPREN 85 (211)
Q Consensus 8 ~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~--~~r~~ 85 (211)
.|++++| ++|++||+||||||++ +++++.++++.|++.|||+||||+.|| +|+.+|++|++ .+|++
T Consensus 24 ~~~~~~L-~tg~~vs~lglGt~~~--------~~~~~~~~l~~Al~~Gi~~~DTA~~Yg---~E~~vG~al~~~~~~R~~ 91 (296)
T 1mzr_A 24 NPTVIKL-QDGNVMPQLGLGVWQA--------SNEEVITAIQKALEVGYRSIDTAAAYK---NEEGVGKALKNASVNREE 91 (296)
T ss_dssp CCCEEEC-TTSCEEESBCEECCSC--------CHHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHSCSCGGG
T ss_pred CCceEEC-CCCCeeCCEeEECCCC--------CHHHHHHHHHHHHHcCCCEEECCcccc---CHHHHHHHHHhcCCCccc
Confidence 5889999 6899999999999975 358899999999999999999999999 79999999985 47999
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
++|+||++... .+.+++++++||++||+||||+|++|||++ ..+..++|++|++|+++|+||+|||||
T Consensus 92 v~I~TK~~~~~-----------~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~e~~~al~~l~~~Gkir~iGvSn 160 (296)
T 1mzr_A 92 LFITTKLWNDD-----------HKRPREALLDSLKKLQLDYIDLYLMHWPVPAIDHYVEAWKGMIELQKEGLIKSIGVCN 160 (296)
T ss_dssp CEEEEEECGGG-----------TTCHHHHHHHHHHHHTCSCEEEEEESCCCTTTCCHHHHHHHHHHHHHTTSEEEEEEES
T ss_pred EEEEeccCCCc-----------HHHHHHHHHHHHHHhCCCcEEEEEEccCCCCcCCHHHHHHHHHHHHHCCCcCEEEEeC
Confidence 99999997531 177999999999999999999999999987 467899999999999999999999999
Q ss_pred CCHHHHHHHhcc--CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 165 ASPDTIRRAHAV--HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 165 ~~~~~l~~~~~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
|++++++++++. .+|.++|++||++++. .+++++|+++||+|+|
T Consensus 161 ~~~~~l~~~~~~~~~~p~v~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 206 (296)
T 1mzr_A 161 FQIHHLQRLIDETGVTPVINQIELHPLMQQ--RQLHAWNATHKIQTES 206 (296)
T ss_dssp CCHHHHHHHHHHHSCCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred CCHHHHHHHHHhcCCCceEEeeecccccCC--HHHHHHHHHCCCeEEE
Confidence 999999998864 4678999999999884 5799999999999987
No 36
>3h7r_A Aldo-keto reductase; stress response, NADP, drought tolerance, oxidoreductase; HET: NAP; 1.40A {Arabidopsis thaliana}
Probab=100.00 E-value=1.1e-45 Score=310.91 Aligned_cols=178 Identities=25% Similarity=0.363 Sum_probs=159.9
Q ss_pred CCCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-----
Q 028240 6 KLQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE----- 80 (211)
Q Consensus 6 ~~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~----- 80 (211)
...|++++| ++|++||+||||||+ ++.++|++|++.|||+||||+.|| +|+.+|++|++
T Consensus 22 ~~~m~~~~L-~tg~~vs~lglGt~~------------~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~lG~al~~~~~~g 85 (331)
T 3h7r_A 22 AAPIRFFEL-NTGAKLPCVGLGTYA------------MVATAIEQAIKIGYRHIDCASIYG---NEKEIGGVLKKLIGDG 85 (331)
T ss_dssp ---CCEEEC-TTSCEEESBEEECTT------------CCHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHTT
T ss_pred ccCCcEEEC-CCCCEecCEeeccHH------------HHHHHHHHHHHcCCCEEECccccC---CHHHHHHHHHHHhhcC
Confidence 456899999 699999999999984 567899999999999999999999 89999999986
Q ss_pred -CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC--------------CCCHHHHH
Q 028240 81 -LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------SVPIEETI 145 (211)
Q Consensus 81 -~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~~~~~~~~ 145 (211)
.+|+++||+||++.. +.+++.+++++++||++||+||||+|++|||+. ..+.+++|
T Consensus 86 ~~~R~~v~I~TK~~~~---------~~~~~~i~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~~~~~~~~e~~ 156 (331)
T 3h7r_A 86 FVKREELFITSKLWSN---------DHLPEDVPKALEKTLQDLQIDYVDLYLIHWPASLKKESLMPTPEMLTKPDITSTW 156 (331)
T ss_dssp SSCGGGCEEEEEECGG---------GCSTTHHHHHHHHHHHHHTCSCBSEEEECCSCEECTTCSSCCGGGEECCCHHHHH
T ss_pred CCCchhEEEEEeeCCC---------CCCHHHHHHHHHHHHHHcCCCeeEEEEEecCcccccccccccccccccCCHHHHH
Confidence 379999999999753 347899999999999999999999999999964 24678999
Q ss_pred HHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 146 GEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 146 ~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 157 ~aL~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~~~~~gI~v~a 221 (331)
T 3h7r_A 157 KAMEALYDSGKARAIGVSNFSSKKLTDLLNVARVTPAVNQVECHPVWQQ--QGLHELCKSKGVHLSG 221 (331)
T ss_dssp HHHHHHHHTTSBSSEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHcCCCcEEEecCCCHHHHHHHHHhcCCCceeEEeecccccCC--HHHHHHHHHCCCEEEE
Confidence 99999999999999999999999999988764 689999999999884 5899999999999987
No 37
>3krb_A Aldose reductase; ssgcid, SBRI, emerald biostructures, university of washingto niaid, oxidoreductase, S genomics; HET: NAP; 1.75A {Giardia lamblia}
Probab=100.00 E-value=7.7e-45 Score=306.23 Aligned_cols=177 Identities=26% Similarity=0.399 Sum_probs=157.6
Q ss_pred eecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHh--------cCCC
Q 028240 12 VKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALK--------ELPR 83 (211)
Q Consensus 12 ~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~--------~~~r 83 (211)
+.-+.+|..||.||||||+ .+++++.++|+.|++.|||+||||+.|| +|+.+|++|+ ..+|
T Consensus 16 ~~~~~tg~~vp~lGlGt~~--------~~~~~~~~~v~~Al~~Gi~~~DTA~~Yg---sE~~vG~al~~~~~~~~~g~~R 84 (334)
T 3krb_A 16 TQGPGSMQYPPRLGFGTWQ--------APPEAVQTAVETALMTGYRHIDCAYVYQ---NEEAIGRAFGKIFKDASSGIKR 84 (334)
T ss_dssp -----CCSSCCSBCEECTT--------CCHHHHHHHHHHHHHHTCCEEECCGGGS---CHHHHHHHHHHHHHCTTSSCCG
T ss_pred CcCCCCCCccCCeeeeCCC--------CCHHHHHHHHHHHHHcCCCEEECccccc---CHHHHHHHHHHHhhhccCCCCh
Confidence 3445689999999999986 3678999999999999999999999999 8999999998 5589
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC--------------C-------CCHH
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--------------S-------VPIE 142 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--------------~-------~~~~ 142 (211)
+++||+||++.. +.+++.+++++++||++||+||||+|++|||+. . .+++
T Consensus 85 ~~v~I~TK~~~~---------~~~~~~v~~~~e~SL~rLg~dyiDl~llH~p~~~~~~~~~~~~~~d~~g~~~~~~~~~~ 155 (334)
T 3krb_A 85 EDVWITSKLWNY---------NHRPELVREQCKKTMSDLQVDYLDLFLVHWPLAFVRNDVGDLFPKDAEGRAMLEKVPLA 155 (334)
T ss_dssp GGCEEEEEECGG---------GCSGGGHHHHHHHHHHHHTCSCEEEEEECCSCCBCCCTTCCSSCBCTTSCBCBCCCCHH
T ss_pred hhEEEEeeeCCC---------CCCHHHHHHHHHHHHHHcCCCceeEEEEccccccccccccccCcccccccccccCCCHH
Confidence 999999999864 247899999999999999999999999999943 1 4678
Q ss_pred HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++|++|++|+++||||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 156 e~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~Q~~~~~~~~~--~~l~~~c~~~gI~v~a 223 (334)
T 3krb_A 156 DTWRAMEQLVEEGLVKHIGVSNYTVPLLADLLNYAKIKPLVNQIEIHPWHPN--DATVKFCLDNGIGVTA 223 (334)
T ss_dssp HHHHHHHHHHHHTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHcCCccEEEEecCCHHHHHHHHHhCCCceEEeeeecCccccc--HHHHHHHHHcCCEEEE
Confidence 99999999999999999999999999999998875 789999999999884 6899999999999987
No 38
>3b3d_A YTBE protein, putative morphine dehydrogenase; aldo-keto reductase, oxidoreductase; 2.30A {Bacillus subtilis}
Probab=100.00 E-value=2e-44 Score=301.26 Aligned_cols=180 Identities=24% Similarity=0.388 Sum_probs=161.0
Q ss_pred CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc------CCC
Q 028240 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE------LPR 83 (211)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~------~~r 83 (211)
.+++| ++|++||.||||||+++ +.+++.++|++|++.||||||||+.|| +|+.+|+++++ ++|
T Consensus 41 ~~~TL-n~G~~ip~lGlGt~~~~-------d~~e~~~~v~~Al~~Gi~~~DTA~~Yg---nE~~vG~~l~~~~~~~~i~r 109 (314)
T 3b3d_A 41 AKATL-HNGVEMPWFGLGVFQVE-------EGSELVNAVKTAIVHGYRSIDTAAIYG---NEAGVGEGIREGIEEAGISR 109 (314)
T ss_dssp CEEEC-TTSCEEESBCEECCSCC-------CSHHHHHHHHHHHHHTCCEEECCGGGT---CHHHHHHHHHHHHHHHTCCG
T ss_pred CcEEC-CCcCcccceeEECCCCC-------CHHHHHHHHHHHHHcCCCEEECccccC---ChHHHHHHHHHHHHHhCCCc
Confidence 46788 79999999999999864 347899999999999999999999999 89999999874 579
Q ss_pred CcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC
Q 028240 84 ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS 163 (211)
Q Consensus 84 ~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs 163 (211)
+++++.+|.+.. +.+++.+++++++||+|||+||||+|++|+|++ ....++|++|++|+++||||+||||
T Consensus 110 ~~~~i~~k~~~~---------~~~~~~~~~~~e~SL~rL~~dyiDL~~~H~~~~-~~~~e~~~al~~l~~~Gkir~iGvS 179 (314)
T 3b3d_A 110 EDLFITSKVWNA---------DLGYEETLAAFETSLSKLGLDYLDLYLIHWPVE-GKYKEAWRALETLYKEGRIKAIGVS 179 (314)
T ss_dssp GGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSCCT-TTHHHHHHHHHHHHHTTSEEEEEEE
T ss_pred ccccccccCcCC---------CCCHHHHHHHHHHHHHHhCCCcccccccccccc-cchhHHHHHHHHHHHCCCEeEEEec
Confidence 999999999764 347999999999999999999999999999975 4678999999999999999999999
Q ss_pred CCCHHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 164 EASPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 164 ~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
||++++++++++..++.++|++|++..+..+.+++++|+++||+|+|
T Consensus 180 n~~~~~l~~~~~~~~i~~~~nq~~~~~~~~~~~ll~~c~~~gI~v~a 226 (314)
T 3b3d_A 180 NFQIHHLEDLMTAAEIKPMINQVEFHPRLTQKELIRYCQNQGIQMEA 226 (314)
T ss_dssp SCCHHHHHHHTTTCSSCCSEEEEECBTTBCCHHHHHHHHHHTCEEEE
T ss_pred CCchHHHHHHHHhcCCCeEEEEeccccccchHHHHHHHHHcCCEEEE
Confidence 99999999999887766666666766666677899999999999987
No 39
>2bgs_A Aldose reductase; holoenzyme, aldo/keto reductase, oxidoreductase; HET: NDP; 1.64A {Hordeum vulgare} PDB: 2bgq_A* 2vdg_A*
Probab=100.00 E-value=2.7e-44 Score=303.69 Aligned_cols=178 Identities=27% Similarity=0.417 Sum_probs=159.9
Q ss_pred C-CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhc-----C
Q 028240 9 V-PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-----L 81 (211)
Q Consensus 9 ~-~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-----~ 81 (211)
| ++++| ++|++||+||||||+. + +++.++|+.|++ .|||+||||+.|| +|+.+|++|++ .
T Consensus 36 m~~~~~L-~tg~~vp~lglGt~~~--------~-~~~~~~l~~Al~~~Gi~~iDTA~~Yg---~E~~vG~al~~~~~~g~ 102 (344)
T 2bgs_A 36 EQDHFVL-KSGHAMPAVGLGTWRA--------G-SDTAHSVRTAITEAGYRHVDTAAEYG---VEKEVGKGLKAAMEAGI 102 (344)
T ss_dssp -CCEEEC-TTSCEEESBCEECTTC--------G-GGHHHHHHHHHHTTCCCEEECCGGGT---CHHHHHHHHHHHHHTTC
T ss_pred CCceEEC-CCCCccCCeeEeCCCC--------c-HHHHHHHHHHHHhcCCCEEECCCccC---CHHHHHHHHHHhhhcCC
Confidence 5 47888 6999999999999852 4 788999999999 9999999999999 79999999986 5
Q ss_pred CCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC---------------CCCHHHHHH
Q 028240 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT---------------SVPIEETIG 146 (211)
Q Consensus 82 ~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~---------------~~~~~~~~~ 146 (211)
+|++++|+||++.. ..+++.+++++++||++||+||||+|++|||+. ..+..++|+
T Consensus 103 ~R~~v~I~TK~~~~---------~~~~~~v~~ale~SL~rLg~dyIDl~llH~p~~~~~~~~~~~~~~~~~~~~~~e~~~ 173 (344)
T 2bgs_A 103 DRKDLFVTSKIWCT---------NLAPERVRPALENTLKDLQLDYIDLYHIHWPFRLKDGAHMPPEAGEVLEFDMEGVWK 173 (344)
T ss_dssp CGGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCEEEEEESSSCEECTTCCSSCCTTCEECCCHHHHHH
T ss_pred CcccEEEEeccCCC---------CCCHHHHHHHHHHHHHHhCCCcEEEEEEecCCccccccccccccccccCCCHHHHHH
Confidence 79999999999753 347999999999999999999999999999963 236789999
Q ss_pred HHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 147 EMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 147 ~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+|++|+++|+||+||||||++++++++++.. +|+++|++||++.+. .+++++|+++||+|+|
T Consensus 174 aLe~l~~~GkIr~iGvSn~~~~~l~~~~~~~~i~p~v~Q~e~~~~~~~--~~ll~~~~~~gI~v~a 237 (344)
T 2bgs_A 174 EMENLVKDGLVKDIGVCNYTVTKLNRLLRSAKIPPAVCQMEMHPGWKN--DKIFEACKKHGIHITA 237 (344)
T ss_dssp HHHHHHHTTSEEEEEEESCCHHHHHHHHHHCSSCCSEEEEECBTTBCC--HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCccEEEEecCCHHHHHHHHHhcCCCceeeecccCcccCc--HHHHHHHHHCCCEEEE
Confidence 9999999999999999999999999998764 589999999998874 5799999999999987
No 40
>4gac_A Alcohol dehydrogenase [NADP(+)]; TIM barrel, aldheyde reductase AKR1A4, SMAR1, oxidoreductase; HET: FLC; 1.64A {Mus musculus} PDB: 2alr_A 3h4g_A* 3cv7_A* 3fx4_A* 1ae4_A* 1cwn_A* 1hqt_A*
Probab=100.00 E-value=6.2e-43 Score=293.41 Aligned_cols=178 Identities=33% Similarity=0.466 Sum_probs=159.4
Q ss_pred CeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-------CC
Q 028240 10 PRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-------LP 82 (211)
Q Consensus 10 ~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-------~~ 82 (211)
+++.| ++|++||.||||||+ .+++++.++|++|+++||||||||+.|| +|+.+|++|++ .+
T Consensus 3 ~~v~L-ntG~~vp~iGlGtw~--------~~~~~a~~~i~~Al~~Gin~~DTA~~Yg---sE~~vG~al~~~~~~~~~~~ 70 (324)
T 4gac_A 3 SSVLL-HTGQKMPLIGLGTWK--------SEPGQVKAAIKHALSAGYRHIDCASVYG---NETEIGEALKESVGSGKAVP 70 (324)
T ss_dssp CEEEC-TTSCEEESBCEECTT--------CCHHHHHHHHHHHHHTTCCEEECCGGGS---CHHHHHHHHHHHBSTTSSBC
T ss_pred CeEEC-CCCCEeccceeECCC--------CCHHHHHHHHHHHHHcCCCEEECCcccC---CHHHHHHHHHhhhcccceec
Confidence 46777 899999999999985 3678999999999999999999999999 89999999985 46
Q ss_pred CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC-------------------CCCHHH
Q 028240 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT-------------------SVPIEE 143 (211)
Q Consensus 83 r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~-------------------~~~~~~ 143 (211)
|+++++++|.+.. +.+++.+++++++||+|||+||||+|++|||++ ..++++
T Consensus 71 r~~~~~~~~~~~~---------~~~~~~i~~~~~~SL~rL~~dyiDl~~lH~p~~~~~~~~~~~~~~~~~~~~~~~~~~e 141 (324)
T 4gac_A 71 REELFVTSKLWNT---------KHHPEDVEPALRKTLADLQLEYLDLYLMHWPYAFERGDNPFPKNADGTVRYDSTHYKE 141 (324)
T ss_dssp GGGCEEEEEECGG---------GCSHHHHHHHHHHHHHHHTCSCBSEEEESCSSEECSSSCSSCBCTTSCBCEECCCHHH
T ss_pred ccccccccccCCC---------CCCHHHHHHHHHHHHHHhCCCccceeeeccCcccccccccccccccCccccCCCCHHH
Confidence 8889999998754 347899999999999999999999999999963 346889
Q ss_pred HHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
+|++|++|+++||||+||||||++++++++.... ++.++|++||++.+ +.+++++|+++||+++|
T Consensus 142 ~~~al~~l~~~Gkir~iGvSn~~~~~l~~~~~~~~~~~~~~q~~~~~~~~--~~~l~~~~~~~gi~~~a 208 (324)
T 4gac_A 142 TWKALEVLVAKGLVKALGLSNFNSRQIDDVLSVASVRPAVLQVECHPYLA--QNELIAHCHARGLEVTA 208 (324)
T ss_dssp HHHHHHHHHHTTSBSCEEEESCCHHHHHHHHHHCSSCCCEEEEECBTTBC--CHHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHCCCeeEecCCCCCHHHHHHHHHhCCCCcceeeeccCchhh--HHHHHHHHHHhceeeee
Confidence 9999999999999999999999999999987764 57889999998776 45799999999999987
No 41
>3cf4_A Acetyl-COA decarboxylase/synthase alpha subunit; methanomicrobia, iron-nikel-sulfur, 4Fe-NI-4S, oxidoreductas; 2.00A {Methanosarcina barkeri}
Probab=97.61 E-value=1.8e-05 Score=73.07 Aligned_cols=91 Identities=10% Similarity=0.024 Sum_probs=69.4
Q ss_pred HHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE--EeCCCCH---H----------------HHHHH
Q 028240 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI--GLSEASP---D----------------TIRRA 173 (211)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i--Gvs~~~~---~----------------~l~~~ 173 (211)
++.+|.+|+.+++|++ +|..+.. ..++++++++++..+|+|+.+ |+|++.. . ...+.
T Consensus 231 ~e~sL~~L~~d~vdI~-I~Ghn~~-~~~~iLeaa~~a~~~g~I~~iG~c~T~he~lr~~~~~~~~~~~pv~G~~~~~~~~ 308 (807)
T 3cf4_A 231 VEIGMGTIDKSKPFLC-VIGHNVA-GVTYMMDYMEDNNLTDKMEIAGLCCTAIDLTRYKEADRRPPYAKVIGSMSKELKV 308 (807)
T ss_dssp EEESGGGSCTTSCEEE-EESSCCH-HHHHHHHHHHHTTCTTTSEEEEESHHHHHHTTTTCTTCCCCCSEEEESGGGHHHH
T ss_pred eeccccccCCCCceEE-EECCcCc-cHHHHHHHHHHCCCCCCCcEEeeccCCCchhhccccccccccccccccHHHHHHH
Confidence 5567888999999995 6654432 235889999999999999999 4443333 1 34455
Q ss_pred hccCCceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 174 HAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 174 ~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
++...+++++++||...+ ++++.|.++|++|+++
T Consensus 309 i~tGa~dv~vV~~n~i~~----~ll~~a~~~Gm~Vit~ 342 (807)
T 3cf4_A 309 IRSGMPDVIVVDEQCVRG----DIVPEAQKLKIPVIAS 342 (807)
T ss_dssp HHHTCCSEEEECSSSCCT----THHHHHHHTTCCEEEC
T ss_pred hhcCCCeEEEEEecCCCh----HHHHHHHHCCCEEEEe
Confidence 667889999999997653 6889999999999974
No 42
>1mdl_A Mandelate racemase; isomerase, mandelate pathway, magnesium; HET: RMN SMN; 1.85A {Pseudomonas aeruginosa} SCOP: c.1.11.2 d.54.1.1 PDB: 1mdr_A* 3uxk_A* 3uxl_A* 1dtn_A* 1mra_A* 2mnr_A 1mns_A
Probab=94.54 E-value=1.2 Score=36.92 Aligned_cols=147 Identities=7% Similarity=0.009 Sum_probs=91.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---HHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++-|..+... .++.+...+-++
T Consensus 144 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 210 (359)
T 1mdl_A 144 GVKLATERAVTAAELGFRAVKTRI--GYPALDQDLAVV-RSIRQAVGDDFGIMVDYNQ----------SLDVPAAIKRSQ 210 (359)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEEC--CCSSHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEec--CCCCHHHHHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 456677778888899999988532 2111 22223 3333311234555555421 225555554444
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
. |+.++++++ ..|-+. +.++.+.++++.-.+.=++-- -++++.++++++....+++|+..+-.-. ...
T Consensus 211 ~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPI~~de~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~ 280 (359)
T 1mdl_A 211 A-LQQEGVTWI-----EEPTLQ----HDYEGHQRIQSKLNVPVQMGENWLGPEEMFKALSIGACRLAMPDAMKIGGVTGW 280 (359)
T ss_dssp H-HHHHTCSCE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTTTHHHHH
T ss_pred H-HHHhCCCeE-----ECCCCh----hhHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeecchhhCCHHHH
Confidence 4 777887765 344321 347788888887556544433 3688999999998889999998775321 123
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.++
T Consensus 281 ~~i~~~A~~~g~~~~ 295 (359)
T 1mdl_A 281 IRASALAQQFGIPMS 295 (359)
T ss_dssp HHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHcCCeEe
Confidence 468999999999874
No 43
>2ovl_A Putative racemase; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.13A {Streptomyces coelicolor A3} PDB: 3ck5_A
Probab=94.51 E-value=1.5 Score=36.49 Aligned_cols=149 Identities=11% Similarity=0.059 Sum_probs=89.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+.+.|++.|..--..++ ....+.+ +++++.-.+++-|..+... .++.+...+-++ .
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~G~d~~l~vDan~----------~~~~~~a~~~~~-~ 213 (371)
T 2ovl_A 146 PVADLKTQADRFLAGGFRAIKMKVGRPDLKEDVDRV-SALREHLGDSFPLMVDANM----------KWTVDGAIRAAR-A 213 (371)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEECCCSSHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CSCHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH-H
Confidence 5677778888889999999875321111 0122233 3344311223444444321 225555554444 3
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.++++++ ..|-+. +.++.+.++++.-.+.=.+- +-++++.++++++....+++|+..+-.-. .....
T Consensus 214 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 284 (371)
T 2ovl_A 214 LAPFDLHWI-----EEPTIP----DDLVGNARIVRESGHTIAGGENLHTLYDFHNAVRAGSLTLPEPDVSNIGGYTTFRK 284 (371)
T ss_dssp HGGGCCSEE-----ECCSCT----TCHHHHHHHHHHHCSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTTTSHHHHHH
T ss_pred HHhcCCCEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEeeCccccCCHHHHHH
Confidence 777777654 455322 24666777776544443333 34688999999998889999998775321 12346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 285 i~~~A~~~gi~~~ 297 (371)
T 2ovl_A 285 VAALAEANNMLLT 297 (371)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHcCCeEc
Confidence 8999999999875
No 44
>2pgw_A Muconate cycloisomerase; enolase superfamily, octamer, small metabolism, PSI-II, NYSGXRC, structural genomics, PR structure initiative; 1.95A {Sinorhizobium meliloti}
Probab=93.76 E-value=2.2 Score=35.58 Aligned_cols=148 Identities=11% Similarity=0.043 Sum_probs=90.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..--.-......+.+ +++++.-. ++-|..+... .++.+...+-+ +.|
T Consensus 147 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g-d~~l~vD~n~----------~~~~~~a~~~~-~~l 213 (384)
T 2pgw_A 147 TAEELARDAAVGHAQGERVFYLKVGRGEKLDLEIT-AAVRGEIG-DARLRLDANE----------GWSVHDAINMC-RKL 213 (384)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHTTST-TCEEEEECTT----------CCCHHHHHHHH-HHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEECcCCCHHHHHHHH-HHHHHHcC-CcEEEEecCC----------CCCHHHHHHHH-HHH
Confidence 56777788888899999998852110001122233 44444222 5555544321 23555554433 467
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC-CCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.++++++. .|-+. +.|+.+.++++.-.|-=++--+ ++++.++++++....+++|+..+-.-. .....+
T Consensus 214 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 284 (384)
T 2pgw_A 214 EKYDIEFIE-----QPTVS----WSIPAMAHVREKVGIPIVADQAAFTLYDVYEICRQRAADMICIGPREIGGIQPMMKA 284 (384)
T ss_dssp GGGCCSEEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEe-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEcchhhCCHHHHHHH
Confidence 788877654 44321 3477777787765555444433 688999999998888999987664211 123468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 285 ~~~A~~~g~~~~ 296 (384)
T 2pgw_A 285 AAVAEAAGLKIC 296 (384)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHCCCeEe
Confidence 999999999875
No 45
>2o56_A Putative mandelate racemase; dehydratase, structural genomics, protein structure initiati 2; 2.00A {Salmonella typhimurium}
Probab=93.44 E-value=2.9 Score=35.09 Aligned_cols=151 Identities=10% Similarity=0.011 Sum_probs=91.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------C----cHH--HHHHHHHhcCCCCcEEEEeccccccCCCc
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP--------Y----TNE--ILLGKALKELPRENIQVATKFGFVELGFT 100 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g----~~E--~~lG~~l~~~~r~~~~i~tK~~~~~~~~~ 100 (211)
.+.++..+..+.+.+.|++.+..-.. +|. . ..+ ..+=+++++.-.+++.|......
T Consensus 151 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~~~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~------ 224 (407)
T 2o56_A 151 TEPEQYAQAALTAVSEGYDAIKVDTVAMDRHGNWNQQNLNGPLTDKILRLGYDRMAAIRDAVGPDVDIIAEMHA------ 224 (407)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSBCTTSCBSCSCCCSSCCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccCCcCccccCcccCCCchhHHHHHHHHHHHHHHhcCCCCEEEEECCC------
Confidence 36788888888899999999875321 121 0 001 11122333311235555544421
Q ss_pred ccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCc
Q 028240 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPI 179 (211)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~ 179 (211)
.++.+...+-++. |+.++++++ ..|-+. +.++.+.++++.-.|.=.+-- -++++.++++++....
T Consensus 225 ----~~~~~~a~~~~~~-l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~ 290 (407)
T 2o56_A 225 ----FTDTTSAIQFGRM-IEELGIFYY-----EEPVMP----LNPAQMKQVADKVNIPLAAGERIYWRWGYRPFLENGSL 290 (407)
T ss_dssp ----CSCHHHHHHHHHH-HGGGCCSCE-----ECSSCS----SSHHHHHHHHHHCCSCEEECTTCCHHHHHHHHHHTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhcCCCEE-----eCCCCh----hhHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCC
Confidence 2356665555554 777777654 344322 346777777776555544333 3578899999988889
Q ss_pred eEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 180 TAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 180 ~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+++|+..+-.-. .....+...|+++|+.++
T Consensus 291 d~v~ik~~~~GGite~~~i~~~A~~~g~~~~ 321 (407)
T 2o56_A 291 SVIQPDICTCGGITEVKKICDMAHVYDKTVQ 321 (407)
T ss_dssp SEECCCTTTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 999998775321 113478999999999875
No 46
>2qgy_A Enolase from the environmental genome shotgun sequencing of the sargasso SEA; structural genomics, unknown function, PSI-2; 1.80A {Environmental sample}
Probab=92.97 E-value=3.6 Score=34.45 Aligned_cols=149 Identities=9% Similarity=0.038 Sum_probs=90.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcC-CCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYG-PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+.+.|++.|..-.... .....+.+ +++++.-.+++-|..+... .++.+...+-++.
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~- 216 (391)
T 2qgy_A 149 DTNDYLRQIEKFYGKKYGGIKIYPMLDSLSISIQFV-EKVREIVGDELPLMLDLAV----------PEDLDQTKSFLKE- 216 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEECCCCSSHHHHHHHH-HHHHHHHCSSSCEEEECCC----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCChHHHHHHHH-HHHHHHhCCCCEEEEEcCC----------CCCHHHHHHHHHH-
Confidence 567777888888999999987432111 01112223 3333311234444444421 2355555555444
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.++++++ ..|-+. +.++.+.++++.-.|.=.+- +-++++.++++++....+++|+..+-.-. .....
T Consensus 217 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 287 (391)
T 2qgy_A 217 VSSFNPYWI-----EEPVDG----ENISLLTEIKNTFNMKVVTGEKQSGLVHFRELISRNAADIFNPDISGMGGLIDIIE 287 (391)
T ss_dssp HGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBTTTSSCHHHHHH
T ss_pred HHhcCCCeE-----eCCCCh----hhHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECcchhCCHHHHHH
Confidence 777887654 445322 34777788877655544433 34688999999998889999998775321 12246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 288 i~~~A~~~gi~~~ 300 (391)
T 2qgy_A 288 ISNEASNNGIFIS 300 (391)
T ss_dssp HHHHHHHTTCEEC
T ss_pred HHHHHHHCCCEEe
Confidence 8999999999875
No 47
>2nql_A AGR_PAT_674P, isomerase/lactonizing enzyme; enolase, structural genomics, protein structure initiative, nysgxrc; 1.80A {Agrobacterium tumefaciens str} PDB: 4dn1_A
Probab=92.93 E-value=2.6 Score=35.19 Aligned_cols=146 Identities=15% Similarity=0.092 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCc-CCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKY-GPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Y-g~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+.+.|++.|..--.- ... ..+.+ +++++.-.+++.|..+... .++.+...+-++.
T Consensus 164 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~-~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~~~- 230 (388)
T 2nql_A 164 TLKARGELAKYWQDRGFNAFKFATPVADDG-PAAEI-ANLRQVLGPQAKIAADMHW----------NQTPERALELIAE- 230 (388)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTC-HHHHH-HHHHHHHCTTSEEEEECCS----------CSCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHhCCCEEEEeCCCCChH-HHHHH-HHHHHHhCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 56777788888999999998742111 111 22333 3344311234555545421 2355655555544
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCceEEeccCCccccCc--hh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEWSLWARDI--EN 195 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~ 195 (211)
|+.++++++. .|-+. +.++.+.++++.-.+.=++-- -++++.++++++....+++|+..+- -+. ..
T Consensus 231 l~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~--GGit~~~ 299 (388)
T 2nql_A 231 MQPFDPWFAE-----APVWT----EDIAGLEKVSKNTDVPIAVGEEWRTHWDMRARIERCRIAIVQPEMGH--KGITNFI 299 (388)
T ss_dssp HGGGCCSCEE-----CCSCT----TCHHHHHHHHTSCCSCEEECTTCCSHHHHHHHHTTSCCSEECCCHHH--HCHHHHH
T ss_pred HhhcCCCEEE-----CCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecCCC--CCHHHHH
Confidence 7888877653 44321 347788888876555544433 3688999999998889999987665 232 24
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.++
T Consensus 300 ~i~~~A~~~g~~~~ 313 (388)
T 2nql_A 300 RIGALAAEHGIDVI 313 (388)
T ss_dssp HHHHHHHHHTCEEC
T ss_pred HHHHHHHHcCCeEE
Confidence 68899999999875
No 48
>2og9_A Mandelate racemase/muconate lactonizing enzyme; NYSGXRC, protein structure initiative (PSI) II, PSI-2, 9382A mandelate racemase; 1.90A {Polaromonas SP} PDB: 3cb3_A*
Probab=92.85 E-value=2.1 Score=35.84 Aligned_cols=149 Identities=7% Similarity=-0.044 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+.+.|++.|..--..++ ....+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 162 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v-~avR~avg~d~~l~vDan~----------~~~~~~a~~~~~~- 229 (393)
T 2og9_A 162 PIDQLMVNASASIERGIGGIKLKVGQPDGALDIARV-TAVRKHLGDAVPLMVDANQ----------QWDRPTAQRMCRI- 229 (393)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHH-HHHHHHcCCCCEEEEECCC----------CCCHHHHHHHHHH-
Confidence 5677788888899999998875211111 0012233 4444421223333333321 2356665555544
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.++++++. .|-+. +.++.+.++++.-.+.=.+. +-++++.++++++....+++|+..+-.=. .....
T Consensus 230 l~~~~i~~iE-----~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 300 (393)
T 2og9_A 230 FEPFNLVWIE-----EPLDA----YDHEGHAALALQFDTPIATGEMLTSAAEHGDLIRHRAADYLMPDAPRVGGITPFLK 300 (393)
T ss_dssp HGGGCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHHHH
T ss_pred HHhhCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHCCCCCEEeeCccccCCHHHHHH
Confidence 7888877654 44322 34677777777655543333 34688999999998889999987664211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 301 i~~~A~~~gi~~~ 313 (393)
T 2og9_A 301 IASLAEHAGLMLA 313 (393)
T ss_dssp HHHHHHHTTCEEC
T ss_pred HHHHHHHcCCEEe
Confidence 9999999999874
No 49
>2rdx_A Mandelate racemase/muconate lactonizing enzyme, P; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.00A {Roseovarius nubinhibens}
Probab=92.58 E-value=2.5 Score=35.21 Aligned_cols=146 Identities=11% Similarity=-0.053 Sum_probs=88.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..--........+.+ +++++.-.+++.|..+... .++.+...+-+ +.|
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~d~~l~vDan~----------~~~~~~a~~~~-~~l 212 (379)
T 2rdx_A 145 SEAETRAELARHRAAGYRQFQIKVGADWQSDIDRI-RACLPLLEPGEKAMADANQ----------GWRVDNAIRLA-RAT 212 (379)
T ss_dssp CSHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHGGGSCTTCEEEEECTT----------CSCHHHHHHHH-HHT
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHH-HHH
Confidence 44667777888899999998852111100122223 3444422345555555421 22555444433 335
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++ + +..|-+ .++.+.++++.-.+.=++- +-++++.++++++....+++|+..+-.-. .....+
T Consensus 213 ~~~~i-~-----iE~P~~------~~~~~~~l~~~~~iPI~~de~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 280 (379)
T 2rdx_A 213 RDLDY-I-----LEQPCR------SYEECQQVRRVADQPMKLDECVTGLHMAQRIVADRGAEICCLKISNLGGLSKARRT 280 (379)
T ss_dssp TTSCC-E-----EECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEEETTTTTSHHHHHHH
T ss_pred HhCCe-E-----EeCCcC------CHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 55554 4 445432 5778888887655554443 33688999999998889999998775321 123468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.++
T Consensus 281 ~~~A~~~g~~~~ 292 (379)
T 2rdx_A 281 RDFLIDNRMPVV 292 (379)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCeEE
Confidence 999999999875
No 50
>2zad_A Muconate cycloisomerase; muconate lactonizing enzyme (MLE), TM0006, struct genomics, NPPSFA; HET: 1PE; 1.60A {Thermotoga maritima} PDB: 3deq_A 3der_A* 3des_A* 3dfy_A
Probab=92.55 E-value=1.6 Score=35.90 Aligned_cols=148 Identities=10% Similarity=0.063 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..--........+.+ +++++. .+++-|..-... .++.+...+-++ .|
T Consensus 139 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~d~~~v-~avr~~-g~~~~l~vDan~----------~~~~~~a~~~~~-~l 205 (345)
T 2zad_A 139 TVENRVKEAKKIFEEGFRVIKIKVGENLKEDIEAV-EEIAKV-TRGAKYIVDANM----------GYTQKEAVEFAR-AV 205 (345)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHH-STTCEEEEECTT----------CSCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHcCcCEEEEeecCCHHHHHHHH-HHHHhh-CCCCeEEEECCC----------CCCHHHHHHHHH-HH
Confidence 45777778888899999998742111100012233 555544 344444332211 235555554443 37
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE-EeCCCCHHHHHHHhccCCceEEeccCCccccCc--hhh
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--ENE 196 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~~ 196 (211)
+.++++ ..++..|-+. +.++.+.+++++-.+.-. |=+-++++.++++++....+++|+..+- -+. ...
T Consensus 206 ~~~~i~---~~~iE~P~~~----~~~~~~~~l~~~~~ipia~dE~~~~~~~~~~~i~~~~~d~v~ik~~~--GGit~~~~ 276 (345)
T 2zad_A 206 YQKGID---IAVYEQPVRR----EDIEGLKFVRFHSPFPVAADESARTKFDVMRLVKEEAVDYVNIKLMK--SGISDALA 276 (345)
T ss_dssp HHTTCC---CSEEECCSCT----TCHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHH--HHHHHHHH
T ss_pred HhcCCC---eeeeeCCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHhCCCCEEEEeccc--ccHHHHHH
Confidence 777766 1134555332 346777777776555433 3344789999999988888999986654 221 246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 277 i~~~A~~~g~~~~ 289 (345)
T 2zad_A 277 IVEIAESSGLKLM 289 (345)
T ss_dssp HHHHHHTTTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8999999999875
No 51
>2gl5_A Putative dehydratase protein; structural genomics, protein structure initiati nysgxrc; 1.60A {Salmonella typhimurium} SCOP: c.1.11.2 d.54.1.1 PDB: 4e6m_A*
Probab=92.55 E-value=4.2 Score=34.18 Aligned_cols=151 Identities=11% Similarity=0.077 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCC------C-----------cCCCc---H-H--HHHHHHHhcCCCCcEEEEeccccc
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTAD------K-----------YGPYT---N-E--ILLGKALKELPRENIQVATKFGFV 95 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~------~-----------Yg~g~---~-E--~~lG~~l~~~~r~~~~i~tK~~~~ 95 (211)
.+.++..+....+.+.|++.+..-. . ||.-. . + ..+=+++++.-.+++-|......
T Consensus 149 ~~~~~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~~~~~~~~~GG~~~~~~~~~~~e~v~avR~a~G~d~~l~vDan~- 227 (410)
T 2gl5_A 149 VTPEEYAEAARAALDDGYDAIKVDPLEIDRNGDDCVFQNRNRNYSGLLLADQLKMGEARIAAMREAMGDDADIIVEIHS- 227 (410)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECSSSBCTTSCBTTTSSCCGGGGSCCCHHHHHHHHHHHHHHHHHHCSSSEEEEECTT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCcccccccccccccccCccchhHHHHHHHHHHHHHHhcCCCCEEEEECCC-
Confidence 4678888888889999999987432 1 22100 0 1 11222333311234555544421
Q ss_pred cCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHh
Q 028240 96 ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAH 174 (211)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~ 174 (211)
.++.+...+-++. |+.+++ .++..|-+. +.++.+.+++++-.+.=.+- +-++.+.+++++
T Consensus 228 ---------~~~~~~ai~~~~~-l~~~~i-----~~iE~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i 288 (410)
T 2gl5_A 228 ---------LLGTNSAIQFAKA-IEKYRI-----FLYEEPIHP----LNSDNMQKVSRSTTIPIATGERSYTRWGYRELL 288 (410)
T ss_dssp ---------CSCHHHHHHHHHH-HGGGCE-----EEEECSSCS----SCHHHHHHHHHHCSSCEEECTTCCTTHHHHHHH
T ss_pred ---------CCCHHHHHHHHHH-HHhcCC-----CeEECCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHH
Confidence 2255555444433 665554 456666432 34677777777655544433 336789999999
Q ss_pred ccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 175 AVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 175 ~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+....+++|+..+-.-. .....+...|+++|+.++
T Consensus 289 ~~~~~d~v~ik~~~~GGit~~~~ia~~A~~~gi~~~ 324 (410)
T 2gl5_A 289 EKQSIAVAQPDLCLCGGITEGKKICDYANIYDTTVQ 324 (410)
T ss_dssp HTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred HcCCCCEEecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 98889999998765321 113478999999999875
No 52
>3tj4_A Mandelate racemase; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.50A {Agrobacterium tumefaciens} PDB: 4h19_A*
Probab=91.98 E-value=4.6 Score=33.58 Aligned_cols=150 Identities=17% Similarity=0.106 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+..+.+++. |++.|-.--...+-..+...=+++++.-.+++.+...... .++.+...+-+ +.
T Consensus 151 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~~~-~~ 219 (372)
T 3tj4_A 151 TLEDLLAGSARAVEEDGFTRLKIKVGHDDPNIDIARLTAVRERVDSAVRIAIDGNG----------KWDLPTCQRFC-AA 219 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEECCCSSHHHHHHHHHHHHHHSCTTCEEEEECTT----------CCCHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHccCCCEEEEcCCCCCHHHHHHHHHHHHHHcCCCCcEEeeCCC----------CCCHHHHHHHH-HH
Confidence 677877888889999 9998764321111012222334555422234444444321 12444332222 22
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+. .++.++..|-+.. .++.+.+++++-.+. +.|=+-++...++++++....+++|+..+-.-. .....
T Consensus 220 l~~-----~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 290 (372)
T 3tj4_A 220 AKD-----LDIYWFEEPLWYD----DVTSHARLARNTSIPIALGEQLYTVDAFRSFIDAGAVAYVQPDVTRLGGITEYIQ 290 (372)
T ss_dssp TTT-----SCEEEEESCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred Hhh-----cCCCEEECCCCch----hHHHHHHHHhhcCCCEEeCCCccCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 333 3566677775432 366777777764443 445566889999999998889999998775321 11346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 291 ia~~A~~~gi~~~ 303 (372)
T 3tj4_A 291 VADLALAHRLPVV 303 (372)
T ss_dssp HHHHHHHTTCCBC
T ss_pred HHHHHHHcCCEEE
Confidence 9999999999875
No 53
>2pp0_A L-talarate/galactarate dehydratase; enolase superfamily, LYA; 2.20A {Salmonella typhimurium} PDB: 2pp1_A* 2pp3_A*
Probab=91.81 E-value=3.3 Score=34.75 Aligned_cols=147 Identities=10% Similarity=-0.041 Sum_probs=89.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---HHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
+.++..+....+.+.|++.|..-- |.+. ..+.+ +++++.-.+++.|...... .++.+...+-++
T Consensus 175 ~~e~~~~~a~~~~~~Gf~~vKik~--g~~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~~ai~~~~ 241 (398)
T 2pp0_A 175 PLDQVLKNVVISRENGIGGIKLKV--GQPNCAEDIRRL-TAVREALGDEFPLMVDANQ----------QWDRETAIRMGR 241 (398)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--CCSCHHHHHHHH-HHHHHHHCSSSCEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEec--CCCCHHHHHHHH-HHHHHHcCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 567777888888999999887521 2111 22333 4444321223334333321 235666555555
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEE-eCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
. |+.++++++ ..|-+. +.++.+.+++++-.+.=.+ =+-++.+.++++++....+++|+..+-.=. ...
T Consensus 242 ~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~ 311 (398)
T 2pp0_A 242 K-MEQFNLIWI-----EEPLDA----YDIEGHAQLAAALDTPIATGEMLTSFREHEQLILGNASDFVQPDAPRVGGISPF 311 (398)
T ss_dssp H-HGGGTCSCE-----ECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTSHHHH
T ss_pred H-HHHcCCcee-----eCCCCh----hhHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4 788887654 445322 3467777777765554333 334688999999998888999987664211 112
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.++
T Consensus 312 ~~i~~~A~~~gi~~~ 326 (398)
T 2pp0_A 312 LKIMDLAAKHGRKLA 326 (398)
T ss_dssp HHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHcCCeEe
Confidence 469999999999875
No 54
>2oz8_A MLL7089 protein; structural genomics, unknown function, PSI-2, protein struct initiative; 2.48A {Mesorhizobium loti}
Probab=91.71 E-value=5.2 Score=33.42 Aligned_cols=145 Identities=12% Similarity=0.033 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..--..++-.....+=+++++.-.+++-|...... .++.+...+-++. |
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~e~v~avR~a~G~~~~l~vDan~----------~~~~~~a~~~~~~-l 213 (389)
T 2oz8_A 145 DDDAFVSLFSHAASIGYSAFKIKVGHRDFDRDLRRLELLKTCVPAGSKVMIDPNE----------AWTSKEALTKLVA-I 213 (389)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCSSHHHHHHHHHHHHTTSCTTCEEEEECTT----------CBCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHhCCCEEEEccCCCCHHHHHHHHHHHHHhhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 6777788888889999999874321111001112224444422335555544321 1255555554444 6
Q ss_pred hh--cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC-cccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--h
Q 028240 120 RR--LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG-KIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--E 194 (211)
Q Consensus 120 ~~--Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G-~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~ 194 (211)
+. +++. ++..|-+. +.++.+.++++.- .|.=.+--+.+.+.++++++....+++|+. -+. .
T Consensus 214 ~~~g~~i~-----~iEqP~~~----~~~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik-----GGit~a 279 (389)
T 2oz8_A 214 REAGHDLL-----WVEDPILR----HDHDGLRTLRHAVTWTQINSGEYLDLQGKRLLLEAHAADILNVH-----GQVTDV 279 (389)
T ss_dssp HHTTCCCS-----EEESCBCT----TCHHHHHHHHHHCCSSEEEECTTCCHHHHHHHHHTTCCSEEEEC-----SCHHHH
T ss_pred HhcCCCce-----EEeCCCCC----cCHHHHHHHHhhCCCCCEEeCCCCCHHHHHHHHHcCCCCEEEEC-----cCHHHH
Confidence 66 5544 44555332 2467778888764 454333323388999999998889999998 322 2
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.++
T Consensus 280 ~~i~~~A~~~gi~~~ 294 (389)
T 2oz8_A 280 MRIGWLAAELGIPIS 294 (389)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCeEe
Confidence 468999999999875
No 55
>1rvk_A Isomerase/lactonizing enzyme; enolase superfamily, MR.GI-17937161, NYSGXRC, target T1522, structural genomics, PSI; 1.70A {Agrobacterium tumefaciens} SCOP: c.1.11.2 d.54.1.1
Probab=91.66 E-value=4.8 Score=33.40 Aligned_cols=151 Identities=11% Similarity=-0.017 Sum_probs=89.9
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeC--CCCc-CCC-cHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHH
Q 028240 39 LSEEDGISIIKHAFSKGITFFDT--ADKY-GPY-TNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~Dt--A~~Y-g~g-~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~ 112 (211)
.+.++..+..+.+.+.|++.+.. +..| +.. ..+. .+=+++++.-.+++-|..+... .++.+...
T Consensus 148 ~~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~~~~~~~e~v~avr~a~g~d~~l~vDan~----------~~~~~~a~ 217 (382)
T 1rvk_A 148 ATPEDYGRFAETLVKRGYKGIKLHTWMPPVSWAPDVKMDLKACAAVREAVGPDIRLMIDAFH----------WYSRTDAL 217 (382)
T ss_dssp SSHHHHHHHHHHHHHHTCSEEEEECCCTTSTTCCCHHHHHHHHHHHHHHHCTTSEEEEECCT----------TCCHHHHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCcCccccccchHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 35677778888889999998774 2211 100 1111 2223444311234555544421 22555554
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEE-eCCCC-HHHHHHHhccCCceEEeccCCccc
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEAS-PDTIRRAHAVHPITAVQLEWSLWA 190 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~-~~~l~~~~~~~~~~~~q~~~~~~~ 190 (211)
+-+ +.|+.++++++ ..|-+. +.++.+.++++.-.+.=.+ =+-++ ++.++++++....+++|+..+-.=
T Consensus 218 ~~~-~~l~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~i~~~~~d~v~ik~~~~G 287 (382)
T 1rvk_A 218 ALG-RGLEKLGFDWI-----EEPMDE----QSLSSYKWLSDNLDIPVVGPESAAGKHWHRAEWIKAGACDILRTGVNDVG 287 (382)
T ss_dssp HHH-HHHHTTTCSEE-----ECCSCT----TCHHHHHHHHHHCSSCEEECSSCSSHHHHHHHHHHTTCCSEEEECHHHHT
T ss_pred HHH-HHHHhcCCCEE-----eCCCCh----hhHHHHHHHHhhCCCCEEEeCCccCcHHHHHHHHHcCCCCEEeeCchhcC
Confidence 444 35777776644 455332 3467777777764454333 33467 899999999888999998766421
Q ss_pred c-CchhhHHHHHHHcCCeee
Q 028240 191 R-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 191 ~-~~~~~~~~~~~~~gi~v~ 209 (211)
. .....+...|+++|+.++
T Consensus 288 Git~~~~i~~~A~~~g~~~~ 307 (382)
T 1rvk_A 288 GITPALKTMHLAEAFGMECE 307 (382)
T ss_dssp SHHHHHHHHHHHHHTTCCEE
T ss_pred CHHHHHHHHHHHHHcCCeEe
Confidence 1 113468999999999875
No 56
>2ox4_A Putative mandelate racemase; enolase, dehydratase, structural genomics, protein structure initiative, PSI, nysgrc; 1.80A {Zymomonas mobilis}
Probab=91.24 E-value=4 Score=34.23 Aligned_cols=150 Identities=9% Similarity=0.044 Sum_probs=89.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCC----cCC--------Cc-------HHHHHHHHHhcCCCCcEEEEeccccccCCC
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADK----YGP--------YT-------NEILLGKALKELPRENIQVATKFGFVELGF 99 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~----Yg~--------g~-------~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~ 99 (211)
.+.++..+....+.+.|++.+..-.. +|. .. ..+.+ +++++.-.+++.|......
T Consensus 145 ~~~e~~~~~a~~~~~~Gf~~vKik~~~~~~~G~~~~s~~~g~~~~~~~~~~~e~v-~avr~avG~d~~l~vDan~----- 218 (403)
T 2ox4_A 145 GRKEEYAEEALKAVAEGYDAVKVDVLAHDRNGSREGVFLEGPLPSETIKIGVERV-EAIRNAVGPDVDIIVENHG----- 218 (403)
T ss_dssp CSHHHHHHHHHHHHHTTCSEEEECCSSSCTTSCCTTCCCSSSCCHHHHHHHHHHH-HHHHHHHCTTSEEEEECTT-----
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeccccCCccccccCcccCCCchHHHHHHHHHH-HHHHHHhCCCCeEEEECCC-----
Confidence 46788888888899999999874321 221 00 11222 2333311235555544421
Q ss_pred cccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC-CCHHHHHHHhccCC
Q 028240 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAVHP 178 (211)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~ 178 (211)
.++.+...+-++. |+.+++ .++..|-+. +.++.+.+++++-.|.=.+--+ ++++.++++++...
T Consensus 219 -----~~~~~~ai~~~~~-l~~~~i-----~~iE~P~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~ 283 (403)
T 2ox4_A 219 -----HTDLVSAIQFAKA-IEEFNI-----FFYEEINTP----LNPRLLKEAKKKIDIPLASGERIYSRWGFLPFLEDRS 283 (403)
T ss_dssp -----CSCHHHHHHHHHH-HGGGCE-----EEEECCSCT----TSTHHHHHHHHTCCSCEEECTTCCHHHHHHHHHHTTC
T ss_pred -----CCCHHHHHHHHHH-HHhhCC-----CEEeCCCCh----hhHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCC
Confidence 2255555444443 666554 455666432 3467778888775555444333 57789999998888
Q ss_pred ceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 179 ITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 179 ~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
.+++|+..+-.-. .....+...|+++|+.++
T Consensus 284 ~d~v~ik~~~~GGite~~~i~~~A~~~g~~~~ 315 (403)
T 2ox4_A 284 IDVIQPDLGTCGGFTEFKKIADMAHIFEVTVQ 315 (403)
T ss_dssp CSEECCCHHHHTHHHHHHHHHHHHHHTTCEEC
T ss_pred CCEEecCccccCCHHHHHHHHHHHHHcCCEEe
Confidence 8999987664211 112468999999999875
No 57
>1tzz_A Hypothetical protein L1841; structural genomics, mandelate racemase like fold, nysgxrc target T1523, PSI, protein structure initiative; 1.86A {Bradyrhizobium japonicum} SCOP: c.1.11.2 d.54.1.1 PDB: 2dw7_A* 2dw6_A*
Probab=90.81 E-value=6.4 Score=32.86 Aligned_cols=147 Identities=11% Similarity=-0.045 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+.+.|++.|..--.-++ ....+.+ +++++.-.+++.|...... .++.+...+-++.
T Consensus 165 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~- 232 (392)
T 1tzz_A 165 GLSMLRGEMRGYLDRGYNVVKMKIGGAPIEEDRMRI-EAVLEEIGKDAQLAVDANG----------RFNLETGIAYAKM- 232 (392)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECSSSCHHHHHHHH-HHHHHHHTTTCEEEEECTT----------CCCHHHHHHHHHH-
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 5677778888889999998874211111 0122233 3333311234444444321 2355555444444
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEE-eCCCCHHHHHHHhccC----CceEEeccCCccccC-
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVH----PITAVQLEWSLWARD- 192 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~----~~~~~q~~~~~~~~~- 192 (211)
|+.++++++ ..|-+. +.++.+.+++++-.+.=.+ =+-++.+.++++++.. ..+++|+..+-.-.-
T Consensus 233 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~~~~~d~v~ik~~~~GGit 303 (392)
T 1tzz_A 233 LRDYPLFWY-----EEVGDP----LDYALQAALAEFYPGPMATGENLFSHQDARNLLRYGGMRPDRDWLQFDCALSYGLC 303 (392)
T ss_dssp HTTSCCSEE-----ECCSCT----TCHHHHHHHTTTCCSCEEECTTCCSHHHHHHHHHHSCCCTTTCEECCCTTTTTCHH
T ss_pred HHHcCCCee-----cCCCCh----hhHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCccCCcEEEECccccCCHH
Confidence 666676544 455332 3477778887765554333 3347889999999887 789999987653211
Q ss_pred chhhHHHHHHHcCCe
Q 028240 193 IENEIVPLCRFVRLA 207 (211)
Q Consensus 193 ~~~~~~~~~~~~gi~ 207 (211)
....+...|+++|+.
T Consensus 304 ~~~~i~~~A~~~gi~ 318 (392)
T 1tzz_A 304 EYQRTLEVLKTHGWS 318 (392)
T ss_dssp HHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHCCCC
Confidence 124689999999998
No 58
>2poz_A Putative dehydratase; octamer, structural genomics, P protein structure initiative, NEW YORK SGX research center structural genomics, nysgxrc; 2.04A {Mesorhizobium loti}
Probab=90.72 E-value=6.5 Score=32.77 Aligned_cols=150 Identities=10% Similarity=0.070 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCC--C----------cCCCcHHH------HHHHHHhcCCCCcEEEEeccccccCCCc
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTAD--K----------YGPYTNEI------LLGKALKELPRENIQVATKFGFVELGFT 100 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~--~----------Yg~g~~E~------~lG~~l~~~~r~~~~i~tK~~~~~~~~~ 100 (211)
.+.++..+....+.+.|++.+..-. . ||. ..+. .+=+++++.-.+++-|......
T Consensus 136 ~~~~~~~~~a~~~~~~Gf~~vKik~g~~~~g~~~~~~~~gg-~~~~~~~~~~e~v~avr~a~G~d~~l~vD~n~------ 208 (392)
T 2poz_A 136 DTPDEFARAVERPLKEGYGALKFYPLAQRVGSALQHVTRRS-MSAEAIELAYRRVKAVRDAAGPEIELMVDLSG------ 208 (392)
T ss_dssp CSHHHHHHHTHHHHHTTCSEEEECCCCEEETTEEECCBTTB-CCHHHHHHHHHHHHHHHHHHCTTSEEEEECTT------
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEecccccccccccccccCC-cchhhHHHHHHHHHHHHHhcCCCCEEEEECCC------
Confidence 3677777888889999999877421 1 221 1111 1112233211234555544421
Q ss_pred ccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCc
Q 028240 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPI 179 (211)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~ 179 (211)
.++.+...+-++. |+.++ +.++..|-+. +.++.+.++++.-.+.=.+-- -++++.++++++....
T Consensus 209 ----~~~~~~a~~~~~~-l~~~~-----i~~iE~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~ 274 (392)
T 2poz_A 209 ----GLTTDETIRFCRK-IGELD-----ICFVEEPCDP----FDNGALKVISEQIPLPIAVGERVYTRFGFRKIFELQAC 274 (392)
T ss_dssp ----CSCHHHHHHHHHH-HGGGC-----EEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHTTTCC
T ss_pred ----CCCHHHHHHHHHH-HHhcC-----CCEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCC
Confidence 2255554444444 56555 4455666432 346777777776555544433 3578899999998889
Q ss_pred eEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 180 TAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 180 ~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+++|+..+-.-. .....+...|+++|+.++
T Consensus 275 d~v~ik~~~~GGit~~~~i~~~A~~~g~~~~ 305 (392)
T 2poz_A 275 GIIQPDIGTAGGLMETKKICAMAEAYNMRVA 305 (392)
T ss_dssp SEECCCTTTSSCHHHHHHHHHHHHTTTCEEC
T ss_pred CEEecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 999998765321 113478999999999875
No 59
>3bjs_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI-2, protein struc initiative; 2.70A {Polaromonas SP}
Probab=90.66 E-value=3.9 Score=34.71 Aligned_cols=147 Identities=7% Similarity=0.064 Sum_probs=87.8
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh
Q 028240 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (211)
++..+..+.+.+.|++.+..--........+.+ +++++.-.+++.|...... .++.+...+-++. |+.
T Consensus 187 e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~avG~d~~l~vDan~----------~~~~~eai~~~~~-L~~ 254 (428)
T 3bjs_A 187 ESLAEEAQEYIARGYKALKLRIGDAARVDIERV-RHVRKVLGDEVDILTDANT----------AYTMADARRVLPV-LAE 254 (428)
T ss_dssp HHHHHHHHHHHHHTCSEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHHHHHH-HHH
T ss_pred HHHHHHHHHHHHCCCCEEEECCCCCHHHHHHHH-HHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHHH-HHh
Confidence 666677788889999987752110101122233 3444321234444444321 2356665555544 788
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCc-ccEE-EeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHH
Q 028240 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK-IKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIV 198 (211)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~-ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~ 198 (211)
++++++. .|-+. +.++.+.+++++-. |.=. +=+-++.+.++++++....+++|+..+-.-. .....+.
T Consensus 255 ~~i~~iE-----qP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGitea~~ia 325 (428)
T 3bjs_A 255 IQAGWLE-----EPFAC----NDFASYREVAKITPLVPIAAGENHYTRFEFGQMLDAGAVQVWQPDLSKCGGITEGIRIA 325 (428)
T ss_dssp TTCSCEE-----CCSCT----TCHHHHHHHTTTCSSSCEEECTTCCSHHHHHHHHTTCCEEEECCBTTTSSCHHHHHHHH
T ss_pred cCCCEEE-----CCCCc----cCHHHHHHHHHhCCCCcEEcCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHH
Confidence 8877653 44322 34777777776533 4333 3334688999999998889999998775321 1124689
Q ss_pred HHHHHcCCeee
Q 028240 199 PLCRFVRLAVK 209 (211)
Q Consensus 199 ~~~~~~gi~v~ 209 (211)
..|+++|+.++
T Consensus 326 ~~A~~~gi~~~ 336 (428)
T 3bjs_A 326 AMASAYRIPIN 336 (428)
T ss_dssp HHHHHTTCCBC
T ss_pred HHHHHcCCeEE
Confidence 99999999864
No 60
>3ozy_A Putative mandelate racemase; beta-alpha barrel, enolase superfamily member, M-xylarate, U function; HET: DXL; 1.30A {Bordetella bronchiseptica} PDB: 3ozm_A* 3h12_A 3op2_A*
Probab=90.65 E-value=6.7 Score=32.78 Aligned_cols=149 Identities=9% Similarity=0.013 Sum_probs=90.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+.++.+++.|++.|..--.... ......=+++++.-.+++-|..+... .++.+...+ +-+.|
T Consensus 151 ~~e~~~~~a~~~~~~G~~~iKiKvG~~~-~~d~~~v~avR~a~g~d~~l~vDan~----------~~~~~~A~~-~~~~l 218 (389)
T 3ozy_A 151 TPDQAADELAGWVEQGFTAAKLKVGRAP-RKDAANLRAMRQRVGADVEILVDANQ----------SLGRHDALA-MLRIL 218 (389)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHCCCCEEeeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCC----------CcCHHHHHH-HHHHH
Confidence 6788888889999999999885421111 11222234444421234445444321 124444333 33456
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHH-HcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV-EEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~-~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
+.+++++| ..|-+. +.++.+.+++ +.-.+. ..|=+-++++.++++++....+++|+..+-.=. ..-..
T Consensus 219 ~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~i~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 289 (389)
T 3ozy_A 219 DEAGCYWF-----EEPLSI----DDIEGHRILRAQGTPVRIATGENLYTRNAFNDYIRNDAIDVLQADASRAGGITEALA 289 (389)
T ss_dssp HHTTCSEE-----ESCSCT----TCHHHHHHHHTTCCSSEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTSSCHHHHHH
T ss_pred HhcCCCEE-----ECCCCc----ccHHHHHHHHhcCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 77776655 455332 2366777887 654443 223334778899999998889999998775321 12346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 290 ia~~A~~~gi~~~ 302 (389)
T 3ozy_A 290 ISASAASAHLAWN 302 (389)
T ss_dssp HHHHHHHTTCEEC
T ss_pred HHHHHHHcCCEEE
Confidence 8999999999875
No 61
>3gd6_A Muconate cycloisomerase; structural genomics, NYSGXRC, target 9375A, divergent enolase, lyase, PSI-2; 1.60A {Oceanobacillus iheyensis HTE831} PDB: 2oqy_A 3es8_A 3es7_A 3fyy_A 3hpf_A*
Probab=90.63 E-value=3.3 Score=34.74 Aligned_cols=150 Identities=9% Similarity=0.012 Sum_probs=91.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEE-eccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVA-TKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~-tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+..+.+++.|++.|..--..... .+...=+++++.-.+++-|. ..... .++.+...+ +-+.
T Consensus 142 ~~e~~~~~a~~~~~~G~~~~KiKvG~~~~-~d~~~v~avR~a~g~~~~l~~vDan~----------~~~~~~A~~-~~~~ 209 (391)
T 3gd6_A 142 EVESNLDVVRQKLEQGFDVFRLYVGKNLD-ADEEFLSRVKEEFGSRVRIKSYDFSH----------LLNWKDAHR-AIKR 209 (391)
T ss_dssp HHHHHHHHHHHHHHTTCCEEEEECSSCHH-HHHHHHHHHHHHHGGGCEEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeCCCHH-HHHHHHHHHHHHcCCCCcEEEecCCC----------CcCHHHHHH-HHHH
Confidence 56778888888999999998753211111 12222244443212344444 33321 124443332 2344
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
|+.+++ ++.++..|-+.. .++.+.++++.-.+.= |=|-++.+.++++++....+++|+..+-.=. ..-..+
T Consensus 210 l~~~~i---~~~~iEqP~~~~----d~~~~~~l~~~~~iPI-dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 281 (391)
T 3gd6_A 210 LTKYDL---GLEMIESPAPRN----DFDGLYQLRLKTDYPI-SEHVWSFKQQQEMIKKDAIDIFNISPVFIGGLTSAKKA 281 (391)
T ss_dssp HTTCCS---SCCEEECCSCTT----CHHHHHHHHHHCSSCE-EEECCCHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHhcCC---CcceecCCCChh----hHHHHHHHHHHcCCCc-CCCCCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 555554 224555664322 3677788887766655 8888999999999988888999987764311 113468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 282 a~~A~~~gi~~~ 293 (391)
T 3gd6_A 282 AYAAEVASKDVV 293 (391)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCEEE
Confidence 999999999885
No 62
>2hxt_A L-fuconate dehydratase; enolase superfamily, D-erythromohydr unknown function; HET: EHM; 1.70A {Xanthomonas campestris PV} PDB: 1yey_A 2hxu_A* 2hne_A
Probab=90.44 E-value=5.2 Score=34.03 Aligned_cols=150 Identities=10% Similarity=0.065 Sum_probs=88.6
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
.++++..+....+.+.|++.|..--.-......+.+ +++++.-.+++-|...... .++.+...+-++.
T Consensus 197 ~~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~- 264 (441)
T 2hxt_A 197 YSDEKLVRLAKEAVADGFRTIKLKVGANVQDDIRRC-RLARAAIGPDIAMAVDANQ----------RWDVGPAIDWMRQ- 264 (441)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEECCSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHHHHHHT-
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEccCCCHHHHHHHH-HHHHHhcCCCCeEEEECCC----------CCCHHHHHHHHHH-
Confidence 367778888888999999998742110000112223 4444311233444433321 2355555444444
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-Ccc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 195 (211)
|+.++++++ ..|-+. +.++.+.++++. +.| -..|=+-+++..++++++....+++|+..+-.=. ....
T Consensus 265 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGite~~ 335 (441)
T 2hxt_A 265 LAEFDIAWI-----EEPTSP----DDVLGHAAIRQGITPVPVSTGEHTQNRVVFKQLLQAGAVDLIQIDAARVGGVNENL 335 (441)
T ss_dssp TGGGCCSCE-----ECCSCT----TCHHHHHHHHHHHTTSCEEECTTCCSHHHHHHHHHHTCCSEECCCTTTSSHHHHHH
T ss_pred HHhcCCCee-----eCCCCH----HHHHHHHHHHhhCCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEeCcceeCCHHHHH
Confidence 677776654 455332 246666777765 223 3444456789999999998889999998775311 1124
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.+.
T Consensus 336 ~ia~~A~~~g~~~~ 349 (441)
T 2hxt_A 336 AILLLAAKFGVRVF 349 (441)
T ss_dssp HHHHHHHHTTCEEC
T ss_pred HHHHHHHHcCCeEE
Confidence 68899999999874
No 63
>1nu5_A Chloromuconate cycloisomerase; enzyme, dehalogenation; 1.95A {Pseudomonas SP} SCOP: c.1.11.2 d.54.1.1
Probab=90.22 E-value=5.7 Score=32.83 Aligned_cols=148 Identities=11% Similarity=0.089 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHH--HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNE--ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E--~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
++++..+..+.+++ .|++.|..-- |.+.-+ ...=+++++.-.+++-|...... .++.+...+-++
T Consensus 142 ~~e~~~~~a~~~~~~~Gf~~iKik~--g~~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 209 (370)
T 1nu5_A 142 DTARDIDSALEMIETRRHNRFKVKL--GARTPAQDLEHIRSIVKAVGDRASVRVDVNQ----------GWDEQTASIWIP 209 (370)
T ss_dssp CHHHHHHHHHHHHHTTSCSEEEEEC--SSSCHHHHHHHHHHHHHHHGGGCEEEEECTT----------CCCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCCccEEEEec--CCCChHHHHHHHHHHHHhcCCCCEEEEECCC----------CCCHHHHHHHHH
Confidence 45777777888888 9999988532 211112 12223333311224444444321 125555544443
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE-EeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
.|+.++++++ ..|-+. +.++.+.+++++-.+.=. |=+-++.+.++++++....+++|+..+-.-. ...
T Consensus 210 -~l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 279 (370)
T 1nu5_A 210 -RLEEAGVELV-----EQPVPR----ANFGALRRLTEQNGVAILADESLSSLSSAFELARDHAVDAFSLKLCNMGGIANT 279 (370)
T ss_dssp -HHHHHTCCEE-----ECCSCT----TCHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred -HHHhcCcceE-----eCCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEchhhcCCHHHH
Confidence 5777787654 455322 346777777776444433 3334788999999998888999987664211 112
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.++
T Consensus 280 ~~i~~~A~~~g~~~~ 294 (370)
T 1nu5_A 280 LKVAAVAEAAGISSY 294 (370)
T ss_dssp HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCcEE
Confidence 468999999999875
No 64
>2qde_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-II, NYSGXRC, enolase, structural genomics, protei structure initiative, PSI-2; 1.93A {Azoarcus SP}
Probab=90.02 E-value=3 Score=35.00 Aligned_cols=149 Identities=9% Similarity=0.029 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.+..--........+.+ +++++.-.+++-|...... .++.+...+-++ .|
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~e~v-~avR~a~g~d~~l~vDan~----------~~~~~~a~~~~~-~l 212 (397)
T 2qde_A 145 EPEAVAEEALAVLREGFHFVKLKAGGPLKADIAMV-AEVRRAVGDDVDLFIDING----------AWTYDQALTTIR-AL 212 (397)
T ss_dssp CHHHHHHHHHHHHHHTCSCEEEECCSCHHHHHHHH-HHHHHHHCTTSCEEEECTT----------CCCHHHHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhhheeecccCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHH-HH
Confidence 56777778888889999987742211100122233 4444321223334333321 235555544443 57
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEE-eCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIG-LSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iG-vs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.++++++ ..|-+. +.++.+.++++.-.+.=.+ =+-++.+.++++++....+++|+..+-.-. .....+
T Consensus 213 ~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 283 (397)
T 2qde_A 213 EKYNLSKI-----EQPLPA----WDLDGMARLRGKVATPIYADESAQELHDLLAIINKGAADGLMIKTQKAGGLLKAQRW 283 (397)
T ss_dssp GGGCCSCE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhCCCCEE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEEeccccCCHHHHHHH
Confidence 77787654 455322 3477777887765454333 334688999999988888999987664211 112468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.++
T Consensus 284 ~~~A~~~g~~~~ 295 (397)
T 2qde_A 284 LTLARLANLPVI 295 (397)
T ss_dssp HHHHHHHTCCEE
T ss_pred HHHHHHcCCeEE
Confidence 999999999875
No 65
>2qq6_A Mandelate racemase/muconate lactonizing enzyme- like protein; enolase, Mg ION, PSI-2, NYSGXRC, structural genomics; 2.90A {Rubrobacter xylanophilus dsm 9941}
Probab=89.93 E-value=6.4 Score=33.08 Aligned_cols=149 Identities=13% Similarity=0.112 Sum_probs=89.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CCCcCC-------Cc--------HHHHHHHHHhcCCCCcEEEEeccccccCCCccc
Q 028240 40 SEEDGISIIKHAFSKGITFFDT--ADKYGP-------YT--------NEILLGKALKELPRENIQVATKFGFVELGFTSV 102 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~~Yg~-------g~--------~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~ 102 (211)
++++..+....+.+.|++.+.. +..||. |. ..+.+ +++++.-.+++.|......
T Consensus 149 ~~~~~~~~a~~~~~~Gf~~vKik~~~~~G~~~~~~~G~~~~~~~~~~~~e~v-~avRea~G~d~~l~vDan~-------- 219 (410)
T 2qq6_A 149 SNEEYIAVAREAVERGFDAIKLDVDDITGPLHRDFWNGAISPREHEAMVARV-AAVREAVGPEVEVAIDMHG-------- 219 (410)
T ss_dssp HHHHHHHHHHHHHHTTCSEEEEECCCSSSTTCSCSSSCCCCHHHHHHHHHHH-HHHHHHHCSSSEEEEECTT--------
T ss_pred CHHHHHHHHHHHHHcCCCEEEeeccccCCcccCCcCccccchhhHHHHHHHH-HHHHHhcCCCCEEEEECCC--------
Confidence 5677777888889999998763 222332 11 11222 3333311234555444421
Q ss_pred ccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceE
Q 028240 103 IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITA 181 (211)
Q Consensus 103 ~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~ 181 (211)
.++.+...+-++. |+.+++++ +..|-+. +.++.+.+++++-.+.=.+- +-++.+.++++++....++
T Consensus 220 --~~~~~~a~~~~~~-l~~~~i~~-----iEeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~ 287 (410)
T 2qq6_A 220 --RFDIPSSIRFARA-MEPFGLLW-----LEEPTPP----ENLDALAEVRRSTSTPICAGENVYTRFDFRELFAKRAVDY 287 (410)
T ss_dssp --CCCHHHHHHHHHH-HGGGCCSE-----EECCSCT----TCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSE
T ss_pred --CCCHHHHHHHHHH-HhhcCCCe-----EECCCCh----hhHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCE
Confidence 2355555555544 77777664 4455332 34777788877655543333 3468899999999888899
Q ss_pred EeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 182 VQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 182 ~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+|+..+-.-. .....+...|+++|+.++
T Consensus 288 v~ik~~~~GGite~~~ia~~A~~~g~~~~ 316 (410)
T 2qq6_A 288 VMPDVAKCGGLAEAKRIANLAELDYIPFA 316 (410)
T ss_dssp ECCBHHHHTHHHHHHHHHHHHHTTTCCBC
T ss_pred EecCccccCCHHHHHHHHHHHHHcCCeEe
Confidence 9987664211 112468899999999864
No 66
>3dg3_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding; 1.60A {Mycobacterium smegmatis} PDB: 3dg6_A* 3dg7_A*
Probab=89.57 E-value=7.6 Score=32.11 Aligned_cols=148 Identities=13% Similarity=0.102 Sum_probs=87.9
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+..+.+++. |++.|-.--.......+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 139 ~~~~~~~~a~~~~~~~G~~~~K~K~g~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~ 207 (367)
T 3dg3_A 139 DPVKMVAEAERIRETYGINTFKVKVGRRPVQLDTAVVRALRERFGDAIELYVDGNR----------GWSAAESLR-AMRE 207 (367)
T ss_dssp CHHHHHHHHHHHHHHHCCCEEEEECCCSSTHHHHHHHHHHHHHHGGGSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCccEEEEeeCCChhhhHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 567777888888888 9998764322111102222334444321233334333321 124433322 3345
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--hh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--EN 195 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~ 195 (211)
|+.++++++ ..|-+. +.++.+.++++.-.+. ..|=+-++.+.++++++....+++|+..+-. +. ..
T Consensus 208 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~--Git~~~ 276 (367)
T 3dg3_A 208 MADLDLLFA-----EELCPA----DDVLSRRRLVGQLDMPFIADESVPTPADVTREVLGGSATAISIKTART--GFTGST 276 (367)
T ss_dssp TTTSCCSCE-----ESCSCT----TSHHHHHHHHHHCSSCEEECTTCSSHHHHHHHHHHTSCSEEEECHHHH--TTHHHH
T ss_pred HHHhCCCEE-----ECCCCc----ccHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeehhhh--hHHHHH
Confidence 555665544 455432 2366677777764444 3444557899999999988899999987765 32 24
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.+.
T Consensus 277 ~ia~~A~~~gi~~~ 290 (367)
T 3dg3_A 277 RVHHLAEGLGLDMV 290 (367)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCeEE
Confidence 68999999999885
No 67
>1tkk_A Similar to chloromuconate cycloisomerase; epimerase, enolase super family,; 2.10A {Bacillus subtilis} SCOP: c.1.11.2 d.54.1.1 PDB: 1jpm_A
Probab=89.50 E-value=5 Score=33.09 Aligned_cols=149 Identities=7% Similarity=0.059 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHH---HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNE---ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E---~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
++++..+....+.+.|++.|..-- |.+.-+ +.+ +++++.-.+++.|...... .++.+...+-++
T Consensus 140 ~~~~~~~~a~~~~~~Gf~~iKik~--g~~~~~~d~~~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~ 206 (366)
T 1tkk_A 140 SPEEMAADAENYLKQGFQTLKIKV--GKDDIATDIARI-QEIRKRVGSAVKLRLDANQ----------GWRPKEAVTAIR 206 (366)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--CSSCHHHHHHHH-HHHHHHHCSSSEEEEECTT----------CSCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEe--CCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHH
Confidence 456777778888899999988532 111122 223 3333311234445544421 125555444444
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccE-EEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
. |+..+ .++.++..|-+. +.++.+.+++++-.+.- .|=+-++.+.+.++++....+++|+..+-.-. ...
T Consensus 207 ~-l~~~~---~~i~~iEqP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~ 278 (366)
T 1tkk_A 207 K-MEDAG---LGIELVEQPVHK----DDLAGLKKVTDATDTPIMADESVFTPRQAFEVLQTRSADLINIKLMKAGGISGA 278 (366)
T ss_dssp H-HHHTT---CCEEEEECCSCT----TCHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred H-HhhcC---CCceEEECCCCc----ccHHHHHHHHhhCCCCEEEcCCCCCHHHHHHHHHhCCCCEEEeehhhhcCHHHH
Confidence 3 55511 234455666432 24677777777644443 33345788999999988888999987764211 112
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.++
T Consensus 279 ~~i~~~A~~~g~~~~ 293 (366)
T 1tkk_A 279 EKINAMAEACGVECM 293 (366)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCcEE
Confidence 468999999999875
No 68
>1r0m_A N-acylamino acid racemase; isomerase; 1.30A {Deinococcus radiodurans} SCOP: c.1.11.2 d.54.1.1 PDB: 1xpy_A* 1xs2_A 2ggj_A 2ggi_A 2ggh_A* 2ggg_A* 2fkp_A
Probab=89.50 E-value=8 Score=31.97 Aligned_cols=145 Identities=14% Similarity=0.112 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..-- +.....+.+ +++++.- +++-|...... .++.+. .+-++ .|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~-~~~~l~vDan~----------~~~~~~-~~~~~-~l 211 (375)
T 1r0m_A 148 DEQATVDLVRRHVEQGYRRIKLKI--KPGWDVQPV-RATREAF-PDIRLTVDANS----------AYTLAD-AGRLR-QL 211 (375)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC-TTSCEEEECTT----------CCCGGG-HHHHH-TT
T ss_pred CHHHHHHHHHHHHHhcccEEEEec--ChHHHHHHH-HHHHHHc-CCCeEEEeCCC----------CCCHHH-HHHHH-HH
Confidence 567777788888999999876421 222233444 4444422 34333333311 124455 33333 36
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++++|+ .|-+. +.++.+.+++++-.+. ..|=+-++.+.++++++....+++|+..+-.-. .....+
T Consensus 212 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 282 (375)
T 1r0m_A 212 DEYDLTYIE-----QPLAW----DDLVDHAELARRIRTPLCLDESVASASDARKALALGAGGVINLKVARVGGHAESRRV 282 (375)
T ss_dssp GGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTSCSEEEECTTTTTSHHHHHHH
T ss_pred HhCCCcEEE-----CCCCc----ccHHHHHHHHHhCCCCEEecCccCCHHHHHHHHHhCCCCEEEECcchhcCHHHHHHH
Confidence 777766654 55322 2356677777654443 333444789999999988888999998775321 112468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.++
T Consensus 283 ~~~A~~~g~~~~ 294 (375)
T 1r0m_A 283 HDVAQSFGAPVW 294 (375)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCcEE
Confidence 999999999954
No 69
>2zc8_A N-acylamino acid racemase; octamer, TIM beta/alpha-barrel, metal-binding, metal binding; 1.95A {Thermus thermophilus}
Probab=89.41 E-value=8.1 Score=31.86 Aligned_cols=144 Identities=14% Similarity=0.119 Sum_probs=86.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+..+.+++.|++.|..-- +.....+.+ +++++ + .++.|...... .++.+. .+ +-+.
T Consensus 141 ~~~~~~~~a~~~~~~G~~~iKik~--~~~~d~~~v-~avr~a~--~~~~l~vDan~----------~~~~~~-~~-~~~~ 203 (369)
T 2zc8_A 141 SVEDTLRVVERHLEEGYRRIKLKI--KPGWDYEVL-KAVREAF--PEATLTADANS----------AYSLAN-LA-QLKR 203 (369)
T ss_dssp SHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHC--TTSCEEEECTT----------CCCGGG-HH-HHHG
T ss_pred CHHHHHHHHHHHHHhhhheeeeec--ChhHHHHHH-HHHHHHc--CCCeEEEecCC----------CCCHHH-HH-HHHH
Confidence 567777788888999999876421 222234444 44443 3 33333333211 124444 33 3344
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++++|+ .|-+. +.++.+.+++++-.+. ..|=+-++.+.++++++....+++|+..+-.-. .....
T Consensus 204 l~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 274 (369)
T 2zc8_A 204 LDELRLDYIE-----QPLAY----DDLLDHAKLQRELSTPICLDESLTGAEKARKAIELGAGRVFNVKPARLGGHGESLR 274 (369)
T ss_dssp GGGGCCSCEE-----CCSCT----TCSHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcEEE-----CCCCc----ccHHHHHHHHhhCCCCEEEcCccCCHHHHHHHHHhCCCCEEEEchhhhCCHHHHHH
Confidence 7777766655 55322 2356667777654443 334445789999999988888999987664211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 275 i~~~A~~~g~~~~ 287 (369)
T 2zc8_A 275 VHALAESAGIPLW 287 (369)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHcCCcEE
Confidence 8999999999954
No 70
>2hzg_A Mandelate racemase/muconate lactonizing enzyme/EN superfamily; structural genomics, predicted mandelate racemase, PSI; 2.02A {Rhodobacter sphaeroides}
Probab=88.98 E-value=6.7 Score=32.84 Aligned_cols=150 Identities=9% Similarity=0.011 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-CcCCC--cHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCC--ChHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD-KYGPY--TNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKG--TPEYVRSC 114 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg~g--~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~--s~~~i~~~ 114 (211)
+.++..+....+.+.|++.|..-. ..|.. .....+=+++++.-.+++-|..+... .+ +.+...+-
T Consensus 145 ~~~~~~~~a~~~~~~Gf~~iKik~spvG~~~~~~~~e~v~avr~a~G~d~~l~vDan~----------~~~~~~~~a~~~ 214 (401)
T 2hzg_A 145 TPQETLERARAARRDGFAAVKFGWGPIGRGTVAADADQIMAAREGLGPDGDLMVDVGQ----------IFGEDVEAAAAR 214 (401)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEESTTTTSSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTTTCHHHHHTT
T ss_pred CHHHHHHHHHHHHHhCCCeEEEcCCCCCCCHHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCCHHHHHHH
Confidence 567777888888999999987520 02321 11112223333311234555555421 23 44554444
Q ss_pred HHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH-cCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-
Q 028240 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE-EGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR- 191 (211)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~-~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~- 191 (211)
++. |+.++++++ ..|-+. +.++.+.++++ .-.+.=++- +-++++.++++++....+++|+..+-.-.
T Consensus 215 ~~~-l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi 284 (401)
T 2hzg_A 215 LPT-LDAAGVLWL-----EEPFDA----GALAAHAALAGRGARVRIAGGEAAHNFHMAQHLMDYGRIGFIQIDCGRIGGL 284 (401)
T ss_dssp HHH-HHHTTCSEE-----ECCSCT----TCHHHHHHHHTTCCSSEEEECTTCSSHHHHHHHHHHSCCSEEEECHHHHTSH
T ss_pred HHH-HHhcCCCEE-----ECCCCc----cCHHHHHHHHhhCCCCCEEecCCcCCHHHHHHHHHCCCCCEEEeCcchhCCH
Confidence 444 777777654 455322 34777888887 544543333 33688999999988888999987664211
Q ss_pred CchhhHHHHHHHcCCeee
Q 028240 192 DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~ 209 (211)
.....+...|+++|+.++
T Consensus 285 t~~~~i~~~A~~~g~~~~ 302 (401)
T 2hzg_A 285 GPAKRVADAAQARGITYV 302 (401)
T ss_dssp HHHHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHHHcCCEEe
Confidence 112468999999999875
No 71
>1sjd_A N-acylamino acid racemase; lyase, isomerase; HET: NPG; 1.87A {Amycolatopsis SP} SCOP: c.1.11.2 d.54.1.1 PDB: 1sja_A* 1sjb_A* 1sjc_A*
Probab=88.83 E-value=8.9 Score=31.59 Aligned_cols=146 Identities=11% Similarity=0.010 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.+..-- +.....+.+. ++++.-.+++.|...... .++.+. .+-+ +.|
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~vKik~--~~~~~~e~v~-avr~~~g~~~~l~vDan~----------~~~~~~-~~~~-~~l 205 (368)
T 1sjd_A 141 TIPQLLDVVGGYLDEGYVRIKLKI--EPGWDVEPVR-AVRERFGDDVLLQVDANT----------AYTLGD-APQL-ARL 205 (368)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEEC--BTTBSHHHHH-HHHHHHCTTSEEEEECTT----------CCCGGG-HHHH-HTT
T ss_pred CHHHHHHHHHHHHHhCccEEEEec--CchhHHHHHH-HHHHhcCCCceEEEeccC----------CCCHHH-HHHH-HHH
Confidence 567777788888899999876421 2222344443 333311223333332211 224555 3333 347
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE-EeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.++++++ ..|-+. +.++.+.+++++-.+.=. |=+-++++.++++++....+++|+..+-.-. .....+
T Consensus 206 ~~~~i~~i-----E~P~~~----~~~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i 276 (368)
T 1sjd_A 206 DPFGLLLI-----EQPLEE----EDVLGHAELARRIQTPICLDESIVSARAAADAIKLGAVQIVNIKPGRVGGYLEARRV 276 (368)
T ss_dssp GGGCCSEE-----ECCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred HhcCCCeE-----eCCCCh----hhHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 77776644 455322 347777778776444333 3344788999999988889999998775321 113468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.++
T Consensus 277 ~~~A~~~g~~~~ 288 (368)
T 1sjd_A 277 HDVCAAHGIPVW 288 (368)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCcEE
Confidence 999999999954
No 72
>3stp_A Galactonate dehydratase, putative; PSI biology, structural genomics, NEW YORK structural genomi research consortium; 1.88A {Labrenzia aggregata iam 12614} PDB: 3sqs_A 3ssz_A
Probab=88.61 E-value=8.6 Score=32.49 Aligned_cols=150 Identities=13% Similarity=0.100 Sum_probs=91.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--Cc----HHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP--YT----NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~----~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (211)
++++..+..+.+++.|++.|..--..+. |. .....=+++++.-.+++-|...... .++.+...+
T Consensus 179 ~~e~~~~~a~~~~~~Gf~~iKik~g~gp~dg~~~~~~die~v~avReavG~d~~L~vDaN~----------~~~~~~Ai~ 248 (412)
T 3stp_A 179 SIEAMQKEAEEAMKGGYKAFKSRFGYGPKDGMPGMRENLKRVEAVREVIGYDNDLMLECYM----------GWNLDYAKR 248 (412)
T ss_dssp CHHHHHHHHHHHHTTTCSEEEEECCCCGGGHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT----------CSCHHHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecccCcccccchHHHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH
Confidence 6788888889999999999876433321 10 1112223444321234444444422 124444433
Q ss_pred HHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-
Q 028240 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR- 191 (211)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~- 191 (211)
- -+.|+.+++++| ..|-+. +.++.+.+++++-.+. ..|=+-++...++++++....+++|+..+-.=.
T Consensus 249 ~-~~~Le~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~li~~~a~D~v~ik~~~~GGi 318 (412)
T 3stp_A 249 M-LPKLAPYEPRWL-----EEPVIA----DDVAGYAELNAMNIVPISGGEHEFSVIGCAELINRKAVSVLQYDTNRVGGI 318 (412)
T ss_dssp H-HHHHGGGCCSEE-----ECCSCT----TCHHHHHHHHHTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCHHHHTHH
T ss_pred H-HHHHHhcCCCEE-----ECCCCc----ccHHHHHHHHhCCCCCEEeCCCCCCHHHHHHHHHcCCCCEEecChhhcCCH
Confidence 3 345677776554 455332 2467778888875554 334455889999999998889999987765311
Q ss_pred CchhhHHHHHHHcCCeee
Q 028240 192 DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 192 ~~~~~~~~~~~~~gi~v~ 209 (211)
..-..+...|+++|+.+.
T Consensus 319 t~a~kia~~A~a~gi~v~ 336 (412)
T 3stp_A 319 TAAQKINAIAEAAQIPVI 336 (412)
T ss_dssp HHHHHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHHHHcCCEEE
Confidence 112468999999999875
No 73
>2p8b_A Mandelate racemase/muconate lactonizing enzyme family protein; enolase superfamily, prediction of function; HET: NSK; 1.70A {Bacillus cereus atcc 14579} PDB: 2p88_A* 2p8c_A*
Probab=88.57 E-value=6.6 Score=32.41 Aligned_cols=149 Identities=11% Similarity=0.105 Sum_probs=86.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHH-HHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR-SCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~-~~~~~s 118 (211)
++++..+..+.+.+.|++.|..--........+.+ +++++.-.+++-|..+... .++.+... +-++ .
T Consensus 141 ~~~~~~~~a~~~~~~Gf~~iKik~g~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~~~-~ 208 (369)
T 2p8b_A 141 DPENMAEEAASMIQKGYQSFKMKVGTNVKEDVKRI-EAVRERVGNDIAIRVDVNQ----------GWKNSANTLTALR-S 208 (369)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------TTBSHHHHHHHHH-T
T ss_pred ChHHHHHHHHHHHHcCcCEEEEEeCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 46777778888899999998852211100012223 3333311234444444321 12344433 3333 3
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.++++++ ..|-+. +.++.+.++++.-.+.=.+- +-++++.++++++....+++|+..+-.-. .....
T Consensus 209 l~~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 279 (369)
T 2p8b_A 209 LGHLNIDWI-----EQPVIA----DDIDAMAHIRSKTDLPLMIDEGLKSSREMRQIIKLEAADKVNIKLMKCGGIYPAVK 279 (369)
T ss_dssp STTSCCSCE-----ECCBCT----TCHHHHHHHHHTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhCCCcEE-----ECCCCc----ccHHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEeecchhCCHHHHHH
Confidence 566666544 454322 34777888887755543333 34788999999998888999987764211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 280 i~~~A~~~g~~~~ 292 (369)
T 2p8b_A 280 LAHQAEMAGIECQ 292 (369)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCcEE
Confidence 8999999999875
No 74
>3eez_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, unknown function, PSI-2, protein structure initiative; 2.80A {Silicibacter pomeroyi}
Probab=87.72 E-value=8.6 Score=31.97 Aligned_cols=146 Identities=8% Similarity=-0.021 Sum_probs=89.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+.++.+++.|++.|..--.... ..+...=+++++.-.+++-|..+... .++.+...+ +-+.|
T Consensus 145 ~~e~~~~~a~~~~~~G~~~iKiK~G~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 212 (378)
T 3eez_A 145 SVEETRAVIDRYRQRGYVAHSVKIGGDV-ERDIARIRDVEDIREPGEIVLYDVNR----------GWTRQQALR-VMRAT 212 (378)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHTTSCCTTCEEEEECTT----------CCCHHHHHH-HHHHT
T ss_pred CHHHHHHHHHHHHhCCCCEEEeccCCCH-HHHHHHHHHHHHHcCCCceEEEECCC----------CCCHHHHHH-HHHHh
Confidence 6788888888899999999885422110 01222334555432345556555432 124443332 22344
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++ ++..|-+ .++.+.++++.-.+. ..|=+-++++.++++++....+++|+..+-.-. ..-..+
T Consensus 213 ~~~~i------~iEqP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~ik~~~~GGit~~~~i 280 (378)
T 3eez_A 213 EDLHV------MFEQPGE------TLDDIAAIRPLHSAPVSVDECLVTLQDAARVARDGLAEVFGIKLNRVGGLTRAARM 280 (378)
T ss_dssp GGGTC------CEECCSS------SHHHHHHTGGGCCCCEEECTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHHH
T ss_pred ccCCe------EEecCCC------CHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEeCchhcCCHHHHHHH
Confidence 55553 4455533 366777777765444 334455889999999998888999987764311 123468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 281 a~~A~~~g~~~~ 292 (378)
T 3eez_A 281 RDIALTHGIDMF 292 (378)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCEEE
Confidence 999999999985
No 75
>3mwc_A Mandelate racemase/muconate lactonizing protein; enolase, structural genomics, protein structure initiative, nysgrc; 1.80A {Kosmotoga olearia}
Probab=87.54 E-value=12 Score=31.45 Aligned_cols=143 Identities=8% Similarity=-0.066 Sum_probs=89.0
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-C-CCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~-~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+++..+.++.+++.|++.|..-- +.....+.+ +++++ . +.-.+.+-...+ ++.+. . .+-+.
T Consensus 164 ~e~~~~~a~~~~~~G~~~iKlKv--~~~~d~~~v-~avR~a~G~~~~L~vDaN~~------------w~~~~-~-~~~~~ 226 (400)
T 3mwc_A 164 IETLIHQVEESLQEGYRRIKIKI--KPGWDVEPL-QETRRAVGDHFPLWTDANSS------------FELDQ-W-ETFKA 226 (400)
T ss_dssp HHHHHHHHHHHHHHTCSCEEEEC--BTTBSHHHH-HHHHHHHCTTSCEEEECTTC------------CCGGG-H-HHHHH
T ss_pred HHHHHHHHHHHHHcCCCEEEEEe--CcchHHHHH-HHHHHhcCCCCEEEEeCCCC------------CCHHH-H-HHHHH
Confidence 78888888999999999876432 222233333 34443 2 222444432221 24444 2 33456
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++.+|. .|-+.. .++.+.++++.-.+. +.|=|-++...++++++....+++|+..+-.=. ..-..
T Consensus 227 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 297 (400)
T 3mwc_A 227 MDAAKCLFHE-----QPLHYE----ALLDLKELGERIETPICLDESLISSRVAEFVAKLGISNIWNIKIQRVGGLLEAIK 297 (400)
T ss_dssp HGGGCCSCEE-----SCSCTT----CHHHHHHHHHHSSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhcCCCEEe-----CCCChh----hHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHhcCCCCEEEEcchhhCCHHHHHH
Confidence 7777776554 553322 367777777764443 455566889999999998888999987764211 11346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 298 ia~~A~~~gi~~~ 310 (400)
T 3mwc_A 298 IYKIATDNGIKLW 310 (400)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCEEE
Confidence 8999999999875
No 76
>3rr1_A GALD, putative D-galactonate dehydratase; enolase, magnesium binding site, lyase; 1.95A {Ralstonia pickettii} PDB: 3rra_A
Probab=87.40 E-value=12 Score=31.46 Aligned_cols=148 Identities=11% Similarity=0.056 Sum_probs=91.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCc-----------HHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCC
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYT-----------NEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~-----------~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s 107 (211)
.++++..+.++.+++.|++.|-. -|... .....=+++++.-.+++-|...... .++
T Consensus 124 ~~~e~~~~~a~~~~~~G~~~iKl---~G~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~----------~~~ 190 (405)
T 3rr1_A 124 DRPADVIAGMKALQAGGFDHFKL---NGCEEMGIIDTSRAVDAAVARVAEIRSAFGNTVEFGLDFHG----------RVS 190 (405)
T ss_dssp SSHHHHHHHHHHHHHTTCCEEEE---ESCCSSSCBCSHHHHHHHHHHHHHHHHTTGGGSEEEEECCS----------CBC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEE---ecCCcccccccchhHHHHHHHHHHHHHHhCCCceEEEECCC----------CCC
Confidence 36788888899999999999887 22110 1122234455432334444444321 124
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccC
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
.+...+ +-+.|+.++++++ ..|-+.. .++.+.++++.-.+. ..|=+-++...++++++....+++|+..
T Consensus 191 ~~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~i~~~~~~~~~l~~~a~d~v~~d~ 260 (405)
T 3rr1_A 191 APMAKV-LIKELEPYRPLFI-----EEPVLAE----QAETYARLAAHTHLPIAAGERMFSRFDFKRVLEAGGVSILQPDL 260 (405)
T ss_dssp HHHHHH-HHHHHGGGCCSCE-----ECSSCCS----STHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHCCCSEECCBT
T ss_pred HHHHHH-HHHHHHhcCCCEE-----ECCCCcc----cHHHHHHHHhcCCCCEEecCCcCCHHHHHHHHHHhCCCeEEECh
Confidence 444333 3345677776655 4554322 356777787765554 3344558899999999988899999987
Q ss_pred Ccccc-CchhhHHHHHHHcCCeee
Q 028240 187 SLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 187 ~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+-.-. ..-..+...|+++|+.+.
T Consensus 261 ~~~GGitea~kia~lA~~~gi~v~ 284 (405)
T 3rr1_A 261 SHAGGITECVKIAAMAEAYDVALA 284 (405)
T ss_dssp TTTTHHHHHHHHHHHHHTTTCEEC
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEE
Confidence 75321 113468999999999875
No 77
>2qdd_A Mandelate racemase/muconate lactonizing enzyme; enolase, structural genomics, PSI, protein structu initiative, nysgrc; 2.30A {Roseovarius nubinhibens} PDB: 3fvd_B
Probab=87.16 E-value=9.5 Score=31.58 Aligned_cols=145 Identities=9% Similarity=-0.019 Sum_probs=87.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+..+.+.+.|++.+..--.-++ ....+.+ +++++.-.+++-|..+... .++.+ ...+.
T Consensus 145 ~~e~~~~~a~~~~~~Gf~~iKik~g~~~~~~~~e~v-~avr~a~g~~~~l~vDan~----------~~~~~----~a~~~ 209 (378)
T 2qdd_A 145 TPDQMLGLIAEAAAQGYRTHSAKIGGSDPAQDIARI-EAISAGLPDGHRVTFDVNR----------AWTPA----IAVEV 209 (378)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEECCSSCHHHHHHHH-HHHHHSCCTTCEEEEECTT----------CCCHH----HHHHH
T ss_pred CHHHHHHHHHHHHHHhhhheeecCCCCChHHHHHHH-HHHHHHhCCCCEEEEeCCC----------CCCHH----HHHHH
Confidence 5677778888888999999885321111 0122233 3444422335555555421 12333 23344
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
+++|. .++ ++..|-+ .++.+.+++++-.|.=.+- +-++++.++++++....+++|+..+-.-. .....
T Consensus 210 ~~~l~---~~i-~iEqP~~------d~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGi~~~~~ 279 (378)
T 2qdd_A 210 LNSVR---ARD-WIEQPCQ------TLDQCAHVARRVANPIMLDECLHEFSDHLAAWSRGACEGVKIKPNRVGGLTRARQ 279 (378)
T ss_dssp HTSCC---CCC-EEECCSS------SHHHHHHHHTTCCSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHHhC---CCc-EEEcCCC------CHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEecccccCCHHHHHH
Confidence 45553 455 6666632 5778888887655543333 34688999999988888999987764211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 280 i~~~A~~~g~~~~ 292 (378)
T 2qdd_A 280 IRDFGVSVGWQMH 292 (378)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8999999999875
No 78
>2gdq_A YITF; mandelate racemase/muconate lactonizing enzyme, TIM-barrel, octamer, structural genomics, PSI; 1.80A {Bacillus subtilis subsp} SCOP: c.1.11.2 d.54.1.1 PDB: 2gge_A
Probab=87.12 E-value=6.6 Score=32.66 Aligned_cols=148 Identities=9% Similarity=0.022 Sum_probs=85.4
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHh
Q 028240 42 EDGISIIKHAFSKGITFFDTADKYGP-YTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (211)
++..+....+.+.|++.|..--.-++ ....+.+ +++++.-.+++.|...... .++.+...+-++. |+
T Consensus 141 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~d~e~v-~avR~a~G~d~~l~vDan~----------~~~~~~a~~~~~~-l~ 208 (382)
T 2gdq_A 141 SRSVSNVEAQLKKGFEQIKVKIGGTSFKEDVRHI-NALQHTAGSSITMILDANQ----------SYDAAAAFKWERY-FS 208 (382)
T ss_dssp HHHHHHHHHHHTTTCCEEEEECSSSCHHHHHHHH-HHHHHHHCTTSEEEEECTT----------CCCHHHHHTTHHH-HT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCCCCCHHHHHHHH-HHHHHhhCCCCEEEEECCC----------CCCHHHHHHHHHH-Hh
Confidence 66667778888999998874211111 0012223 3344311234444444321 1245444333332 55
Q ss_pred hcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE-EeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHH
Q 028240 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI-GLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIV 198 (211)
Q Consensus 121 ~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i-Gvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~ 198 (211)
.++ ++.++..|-+. +.++.+.+++++-.+.=. |=+-++++.++++++....+++|+..+-.-. .....+.
T Consensus 209 ~~~----~i~~iEqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~i~ 280 (382)
T 2gdq_A 209 EWT----NIGWLEEPLPF----DQPQDYAMLRSRLSVPVAGGENMKGPAQYVPLLSQRCLDIIQPDVMHVNGIDEFRDCL 280 (382)
T ss_dssp TCS----CEEEEECCSCS----SCHHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHH
T ss_pred hcc----CCeEEECCCCc----ccHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCEEecCccccCCHHHHHHHH
Confidence 440 34456666432 246777778776544433 3344788999999998889999998775311 1124689
Q ss_pred HHHHHcCCeee
Q 028240 199 PLCRFVRLAVK 209 (211)
Q Consensus 199 ~~~~~~gi~v~ 209 (211)
..|+++|+.++
T Consensus 281 ~~A~~~g~~~~ 291 (382)
T 2gdq_A 281 QLARYFGVRAS 291 (382)
T ss_dssp HHHHHHTCEEC
T ss_pred HHHHHcCCEEe
Confidence 99999999875
No 79
>3jva_A Dipeptide epimerase; enolase superfamily, isomerase; 1.70A {Enterococcus faecalis V583} PDB: 3jw7_A* 3jzu_A* 3k1g_A* 3kum_A*
Probab=86.95 E-value=12 Score=30.81 Aligned_cols=149 Identities=9% Similarity=0.028 Sum_probs=88.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+..+.+++.|++.|-.--.-.. ..+...=+++++.-.+++.+...... .++.+...+ .+
T Consensus 139 ~~~~~~~~a~~~~~~G~~~~K~K~g~~~-~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~a~~----~~ 203 (354)
T 3jva_A 139 EPNVMAQKAVEKVKLGFDTLKIKVGTGI-EADIARVKAIREAVGFDIKLRLDANQ----------AWTPKDAVK----AI 203 (354)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH----HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEeCCCH-HHHHHHHHHHHHHcCCCCeEEEECCC----------CCCHHHHHH----HH
Confidence 5677788888889999999875421111 12223334455422234444444321 124433322 22
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
++|. ..++.++..|-+.. .++.+.+++++-.+. ..|=+-++.+.++++++....+++|+..+-.-. ..-..+
T Consensus 204 ~~L~--~~~i~~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~i 277 (354)
T 3jva_A 204 QALA--DYQIELVEQPVKRR----DLEGLKYVTSQVNTTIMADESCFDAQDALELVKKGTVDVINIKLMKCGGIHEALKI 277 (354)
T ss_dssp HHTT--TSCEEEEECCSCTT----CHHHHHHHHHHCSSEEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HHHH--hcCCCEEECCCChh----hHHHHHHHHHhCCCCEEEcCCcCCHHHHHHHHHcCCCCEEEECchhcCCHHHHHHH
Confidence 3332 24566666765432 366777777764443 334455889999999988888999987664311 113468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 278 ~~~A~~~gi~~~ 289 (354)
T 3jva_A 278 NQICETAGIECM 289 (354)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCeEE
Confidence 999999999985
No 80
>3q45_A Mandelate racemase/muconate lactonizing enzyme FA possible chloromuconate cycloisomerase...; (beta/alpha)8-barrel; 3.00A {Cytophaga hutchinsonii} PDB: 3q4d_A
Probab=86.55 E-value=10 Score=31.31 Aligned_cols=149 Identities=10% Similarity=0.041 Sum_probs=89.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+..+.+++.|++.|-.--.... ..+...=+++++.-.+++-+...... .++.+...+ +-+.|
T Consensus 140 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~-~~d~~~v~avR~~~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 207 (368)
T 3q45_A 140 EPHKMAADAVQIKKNGFEIIKVKVGGSK-ELDVERIRMIREAAGDSITLRIDANQ----------GWSVETAIE-TLTLL 207 (368)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSCH-HHHHHHHHHHHHHHCSSSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCH-HHHHHHHHHHHHHhCCCCeEEEECCC----------CCChHHHHH-HHHHH
Confidence 5677788888889999998764321111 12223334454421234444433321 124444332 34456
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++++|+ .|-+. +.++.+.+++++-.+. +.|=+-++..+++++++....+++|+..+-.=. .....+
T Consensus 208 ~~~~i~~iE-----qP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 278 (368)
T 3q45_A 208 EPYNIQHCE-----EPVSR----NLYTALPKIRQACRIPIMADESCCNSFDAERLIQIQACDSFNLKLSKSAGITNALNI 278 (368)
T ss_dssp GGGCCSCEE-----CCBCG----GGGGGHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECTTTTTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCh----hHHHHHHHHHhhCCCCEEEcCCcCCHHHHHHHHHcCCCCeEEechhhcCCHHHHHHH
Confidence 677766654 44321 3466777777764443 444455889999999998889999998775321 123469
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 279 ~~~A~~~gi~~~ 290 (368)
T 3q45_A 279 IRLAEQAHMPVQ 290 (368)
T ss_dssp HHHHHHTTCCEE
T ss_pred HHHHHHcCCcEE
Confidence 999999999875
No 81
>3i4k_A Muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9450D, isomerase, PSI-2, protein structure initiative; 2.20A {Corynebacterium glutamicum}
Probab=86.47 E-value=13 Score=30.90 Aligned_cols=150 Identities=9% Similarity=0.068 Sum_probs=88.8
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+-.+.+++. |++.|-.--...+-..+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 148 ~~~~~~~~a~~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~~~~A~~-~~~~ 216 (383)
T 3i4k_A 148 PLDVAVAEIEERIEEFGNRSFKLKMGAGDPAEDTRRVAELAREVGDRVSLRIDINA----------RWDRRTALH-YLPI 216 (383)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCSSCHHHHHHHHHHHHHTTTTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCcEEEEeeCCCCHHHHHHHHHHHHHHcCCCCEEEEECCC----------CCCHHHHHH-HHHH
Confidence 466766777777887 9999764321111012223335555533344555555432 124444332 3356
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++++|+ .|-+.. .++.+.++++.-.+. ..|=+-++.++++++++....+++|+..+-.-. ..-..
T Consensus 217 l~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~ 287 (383)
T 3i4k_A 217 LAEAGVELFE-----QPTPAD----DLETLREITRRTNVSVMADESVWTPAEALAVVKAQAADVIALKTTKHGGLLESKK 287 (383)
T ss_dssp HHHTTCCEEE-----SCSCTT----CHHHHHHHHHHHCCEEEESTTCSSHHHHHHHHHHTCCSEEEECTTTTTSHHHHHH
T ss_pred HHhcCCCEEE-----CCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEEcccccCCHHHHHH
Confidence 6777766554 553322 356666776653333 444455889999999988889999998765321 12346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 288 ia~~A~~~gi~~~ 300 (383)
T 3i4k_A 288 IAAIAEAGGLACH 300 (383)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8899999999985
No 82
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=86.37 E-value=2.4 Score=34.02 Aligned_cols=101 Identities=11% Similarity=-0.006 Sum_probs=62.2
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEecc
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (211)
++.+. +..+-+.|.++|+++|.+-....+.....+.+.++.++.+.+...++...+. -+.+.++++.+. .++.+.+.
T Consensus 23 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~~~~e~~~~i~~~~~~~v~~l~-~n~~~i~~a~~~-G~~~V~i~ 99 (295)
T 1ydn_A 23 VPTAD-KIALINRLSDCGYARIEATSFVSPKWVPQLADSREVMAGIRRADGVRYSVLV-PNMKGYEAAAAA-HADEIAVF 99 (295)
T ss_dssp CCHHH-HHHHHHHHTTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCSSSEEEEEC-SSHHHHHHHHHT-TCSEEEEE
T ss_pred cCHHH-HHHHHHHHHHcCcCEEEEccCcCccccccccCHHHHHHHHHhCCCCEEEEEe-CCHHHHHHHHHC-CCCEEEEE
Confidence 34444 4455566788999999987654443211133567777777666566666665 567788888775 33445554
Q ss_pred CCcc--------ccCc------hhhHHHHHHHcCCeee
Q 028240 186 WSLW--------ARDI------ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 186 ~~~~--------~~~~------~~~~~~~~~~~gi~v~ 209 (211)
.+.- .+.. -.+.+++|+++|+.|.
T Consensus 100 ~~~S~~h~~~~~~~~~~e~~~~~~~~v~~a~~~G~~V~ 137 (295)
T 1ydn_A 100 ISASEGFSKANINCTIAESIERLSPVIGAAINDGLAIR 137 (295)
T ss_dssp EESCHHHHHHHTSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EecCHHHHHHHcCCCHHHHHHHHHHHHHHHHHcCCeEE
Confidence 3221 1111 2356899999999885
No 83
>3i6e_A Muconate cycloisomerase I; structural genomics, NYSGXRC, targer 9468A, muconate lactonizing enzyme, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi} PDB: 3i6t_A
Probab=86.29 E-value=12 Score=31.10 Aligned_cols=149 Identities=9% Similarity=0.069 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+.++.+++.|++.|-.--...+-..+...=+++++.- +++-|....... ++.+...+ +-+.|
T Consensus 148 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~a~-~~~~l~vDan~~----------~~~~~A~~-~~~~L 215 (385)
T 3i6e_A 148 DFDADIALMERLRADGVGLIKLKTGFRDHAFDIMRLELIARDF-PEFRVRVDYNQG----------LEIDEAVP-RVLDV 215 (385)
T ss_dssp SHHHHHHHHHHHHHHTCCEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTTC----------CCGGGHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCCCHHHHHHHHHHHHHhC-CCCeEEEECCCC----------CCHHHHHH-HHHHH
Confidence 4566666777888899998764321111012222334455422 444444443221 13333222 33455
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++.+|+ .|-+. +.++.+.+++++-.+. +.|=|-++..++.++++....+++|+..+-.=. .....+
T Consensus 216 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 286 (385)
T 3i6e_A 216 AQFQPDFIE-----QPVRA----HHFELMARLRGLTDVPLLADESVYGPEDMVRAAHEGICDGVSIKIMKSGGLTRAQTV 286 (385)
T ss_dssp HTTCCSCEE-----CCSCT----TCHHHHHHHHTTCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred HhcCCCEEE-----CCCCc----ccHHHHHHHHHhCCCCEEEeCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 667766554 55332 2367778887764443 445566889999999988888999987664211 112468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 287 ~~~A~~~gi~~~ 298 (385)
T 3i6e_A 287 ARIAAAHGLMAY 298 (385)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCEEE
Confidence 999999999974
No 84
>2ps2_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9440A, enolase superfamily, PSI-2; 1.80A {Aspergillus oryzae RIB40}
Probab=85.97 E-value=7.7 Score=32.05 Aligned_cols=146 Identities=15% Similarity=-0.020 Sum_probs=85.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+..+.+.+.|++.|..--. ++-.....+=+++++.-.+++-|..+... .++.+...+-+ +.|
T Consensus 146 ~~~~~~~~a~~~~~~Gf~~iKik~g-~~~~~~~e~v~avr~a~g~~~~l~vDan~----------~~~~~~a~~~~-~~l 213 (371)
T 2ps2_A 146 EPEDMRARVAKYRAKGYKGQSVKIS-GEPVTDAKRITAALANQQPDEFFIVDANG----------KLSVETALRLL-RLL 213 (371)
T ss_dssp CHHHHHHHHHHHHTTTCCEEEEECC-SCHHHHHHHHHHHTTTCCTTCEEEEECTT----------BCCHHHHHHHH-HHS
T ss_pred CHHHHHHHHHHHHHhChheEEeecC-CCHHHHHHHHHHHHHhcCCCCEEEEECCC----------CcCHHHHHHHH-HHH
Confidence 5677778888889999999874211 11001112223444422345555555431 12444333222 223
Q ss_pred -hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEe-CCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 120 -RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGL-SEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 120 -~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGv-s~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
+.++ + ++..|-+ .++.+.++++.-.+.=.+- +-++++.++++++....+++|+..+-.-. .....
T Consensus 214 ~~~~~-----i-~iE~P~~------~~~~~~~l~~~~~iPI~~dE~~~~~~~~~~~i~~~~~d~v~ik~~~~GGit~~~~ 281 (371)
T 2ps2_A 214 PHGLD-----F-ALEAPCA------TWRECISLRRKTDIPIIYDELATNEMSIVKILADDAAEGIDLKISKAGGLTRGRR 281 (371)
T ss_dssp CTTCC-----C-EEECCBS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHHTCCSEEEEEHHHHTSHHHHHH
T ss_pred HhhcC-----C-cCcCCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEechhhcCCHHHHHH
Confidence 4333 4 4555532 4677888887655554433 33688999999998888999987664211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.++
T Consensus 282 i~~~A~~~g~~~~ 294 (371)
T 2ps2_A 282 QRDICLAAGYSVS 294 (371)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8899999999875
No 85
>3sjn_A Mandelate racemase/muconate lactonizing protein; enolase, magnesium binding site, lyase; 1.90A {Shewanella pealeana}
Probab=85.11 E-value=12 Score=30.95 Aligned_cols=148 Identities=14% Similarity=0.118 Sum_probs=87.5
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCC-cCCCcHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCCC-hHHHHHHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADK-YGPYTNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKGT-PEYVRSCCE 116 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~-Yg~g~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s-~~~i~~~~~ 116 (211)
+++..+..+.+++.|++.|..--. +| +.-+. ..=+++++.-.+++-|...... .++ .+...+ +-
T Consensus 147 ~e~~~~~a~~~~~~Gf~~iKlk~g~~g-~~~~~d~~~v~avR~a~g~~~~l~vDan~----------~~~d~~~A~~-~~ 214 (374)
T 3sjn_A 147 PEDNVAIVQGLKDQGFSSIKFGGGVMG-DDPDTDYAIVKAVREAAGPEMEVQIDLAS----------KWHTCGHSAM-MA 214 (374)
T ss_dssp GGGGHHHHHHHHTTTCSEEEEECTTTT-SCHHHHHHHHHHHHHHHCSSSEEEEECTT----------TTCSHHHHHH-HH
T ss_pred HHHHHHHHHHHHHcCCCEEEeccCCCC-CCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HH
Confidence 366777788889999999875432 22 11222 2234454421234444444321 123 433322 33
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.|+.++++++ ..|-+. +.++.+.+++++-.+. ..|=+-++...++++++....+++|+..+-.=. ..-
T Consensus 215 ~~l~~~~i~~i-----EqP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~ 285 (374)
T 3sjn_A 215 KRLEEFNLNWI-----EEPVLA----DSLISYEKLSRQVSQKIAGGESLTTRYEFQEFITKSNADIVQPDITRCGGITEM 285 (374)
T ss_dssp HHSGGGCCSEE-----ECSSCT----TCHHHHHHHHHHCSSEEEECTTCCHHHHHHHHHHHHCCSEECCBTTTSSHHHHH
T ss_pred HHhhhcCceEE-----ECCCCc----ccHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 45566666544 455432 2367777887764443 334445778899999988888999998775321 113
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 286 ~~ia~~A~~~gi~~~ 300 (374)
T 3sjn_A 286 KKIYDIAQMNGTQLI 300 (374)
T ss_dssp HHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHcCCEEE
Confidence 468999999999874
No 86
>3ddm_A Putative mandelate racemase/muconate lactonizing enzyme; structural genomics, NYSGXRC, target 9284B, enolase family, PSI-2; 2.60A {Bordetella bronchiseptica}
Probab=84.38 E-value=6.6 Score=32.88 Aligned_cols=148 Identities=11% Similarity=0.094 Sum_probs=85.6
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh
Q 028240 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (211)
++..+..+.+++.|++.|..--.... ..+...=+++++.-.+++-|...... .++.+...+ +-+.|+.
T Consensus 157 e~~~~~a~~~~~~G~~~iKlK~g~~~-~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~L~~ 224 (392)
T 3ddm_A 157 ENPEDVVARKAAEGYRAFKLKVGFDD-ARDVRNALHVRELLGAATPLMADANQ----------GWDLPRARQ-MAQRLGP 224 (392)
T ss_dssp SSHHHHHHHHHHHTCCCEEEECSSCH-HHHHHHHHHHHHHHCSSSCEEEECTT----------CCCHHHHHH-HHHHHGG
T ss_pred HHHHHHHHHHHHcCCCEEEEecCCCH-HHHHHHHHHHHHhcCCCceEEEeCCC----------CCCHHHHHH-HHHHHHH
Confidence 55666777888999998775322111 11222234444421222333333221 124443332 3345666
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHH
Q 028240 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVP 199 (211)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~ 199 (211)
+++++|+ .|-+..+ .++.+.++++.-.+. +.|=+-++..+++++++....+++|+..+-.-. ..-..+..
T Consensus 225 ~~i~~iE-----eP~~~~d---~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~ 296 (392)
T 3ddm_A 225 AQLDWLE-----EPLRADR---PAAEWAELAQAAPMPLAGGENIAGVAAFETALAARSLRVMQPDLAKWGGFSGCLPVAR 296 (392)
T ss_dssp GCCSEEE-----CCSCTTS---CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHHTCEEEECCCTTTTTHHHHHHHHHH
T ss_pred hCCCEEE-----CCCCccc---hHHHHHHHHHhcCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCcchhCCHHHHHHHHH
Confidence 7765554 5533222 267777887764443 445556889999999988889999998764311 11346999
Q ss_pred HHHHcCCeee
Q 028240 200 LCRFVRLAVK 209 (211)
Q Consensus 200 ~~~~~gi~v~ 209 (211)
.|+++|+.+.
T Consensus 297 ~A~~~gi~~~ 306 (392)
T 3ddm_A 297 AVVAAGLRYC 306 (392)
T ss_dssp HHHHTTCEEC
T ss_pred HHHHcCCEEE
Confidence 9999999874
No 87
>3toy_A Mandelate racemase/muconate lactonizing enzyme FA protein; enolase, magnesium binding site, lyase; HET: P4C; 1.80A {Bradyrhizobium SP} PDB: 3tte_A*
Probab=84.26 E-value=17 Score=30.26 Aligned_cols=150 Identities=13% Similarity=0.085 Sum_probs=88.4
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+.++.+++. |++.|-.--....-..+...=+++++.-.+++-|...... .++.+...+ +-+.
T Consensus 167 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~~~ 235 (383)
T 3toy_A 167 DARDDERTLRTACDEHGFRAIKSKGGHGDLATDEAMIKGLRALLGPDIALMLDFNQ----------SLDPAEATR-RIAR 235 (383)
T ss_dssp CHHHHHHHHHHHHHTSCCCEEEEECCSSCHHHHHHHHHHHHHHHCTTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHccCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCHHHHHH-HHHH
Confidence 678888888899999 9998764321111012222334454421233444444321 124444332 3345
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++.+ +..|-+.. .++.+.+++++-.+. +.|=+-++...++++++....+++|+..+-.=- ..-..
T Consensus 236 l~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~ 306 (383)
T 3toy_A 236 LADYDLTW-----IEEPVPQE----NLSGHAAVRERSEIPIQAGENWWFPRGFAEAIAAGASDFIMPDLMKVGGITGWLN 306 (383)
T ss_dssp HGGGCCSE-----EECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCTTTTTHHHHHHH
T ss_pred HHhhCCCE-----EECCCCcc----hHHHHHHHHhhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 56666554 44564332 356677777764443 445566788999999988888999998775321 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 307 ia~~A~~~gi~~~ 319 (383)
T 3toy_A 307 VAGQADAASIPMS 319 (383)
T ss_dssp HHHHHHHHTCCBC
T ss_pred HHHHHHHcCCEEe
Confidence 8999999999874
No 88
>4dwd_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, EFI, enzyme function initiative, metal protein; HET: MSE; 1.50A {Paracoccus denitrificans} PDB: 3n4e_A*
Probab=83.73 E-value=18 Score=30.21 Aligned_cols=149 Identities=9% Similarity=-0.002 Sum_probs=86.8
Q ss_pred CHHHHHHHH-HHHHHcCCCeEeCCCCcC----CCcHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHH
Q 028240 40 SEEDGISII-KHAFSKGITFFDTADKYG----PYTNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (211)
Q Consensus 40 ~~~~~~~~l-~~A~~~Gi~~~DtA~~Yg----~g~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~ 112 (211)
++++..+.+ +.+++.|++.|-.--... ...-++ ..=+++++.-.+++-|...... .++.+...
T Consensus 139 ~~e~~~~~a~~~~~~~G~~~~KlKvG~~~~~~~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~ 208 (393)
T 4dwd_A 139 SVDEVVREVARRVEAEQPAAVKIRWDGDRTRCDVDIPGDIAKARAVRELLGPDAVIGFDANN----------GYSVGGAI 208 (393)
T ss_dssp CHHHHHHHHHHHHHHHCCSEEEEECCCCTTCCSCCHHHHHHHHHHHHHHHCTTCCEEEECTT----------CCCHHHHH
T ss_pred CHHHHHHHHHHHHHHcCCCEEEEccCCCCcccccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHH
Confidence 567777777 888999999876432110 001122 2234444421223333333321 12444433
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 191 (211)
+ +-+.|+.+++++|. .|-+.. .++.+.+++++-.+. +.|=+-++...++++++.. .+++|+..+-.=.
T Consensus 209 ~-~~~~L~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~-~d~v~~k~~~~GG 277 (393)
T 4dwd_A 209 R-VGRALEDLGYSWFE-----EPVQHY----HVGAMGEVAQRLDITVSAGEQTYTLQALKDLILSG-VRMVQPDIVKMGG 277 (393)
T ss_dssp H-HHHHHHHTTCSEEE-----CCSCTT----CHHHHHHHHHHCSSEEEBCTTCCSHHHHHHHHHHT-CCEECCCTTTTTH
T ss_pred H-HHHHHHhhCCCEEE-----CCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcC-CCEEEeCccccCC
Confidence 2 33456777766554 553322 367777787764443 3344457899999999888 9999998875321
Q ss_pred -CchhhHHHHHHHcCCeee
Q 028240 192 -DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~ 209 (211)
..-..+...|+++|+.+.
T Consensus 278 it~~~~ia~~A~~~gi~~~ 296 (393)
T 4dwd_A 278 ITGMMQCAALAHAHGVEFV 296 (393)
T ss_dssp HHHHHHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHHHHHcCCEEe
Confidence 113468999999999875
No 89
>3p3b_A Mandelate racemase/muconate lactonizing protein; enolase superfamily fold, galacturonate dehydratase, D-tartr galacturonate, lyase; HET: TAR; 1.65A {Geobacillus SP} PDB: 3ops_A* 3n4f_A* 3qpe_A*
Probab=83.57 E-value=7 Score=32.64 Aligned_cols=144 Identities=10% Similarity=-0.003 Sum_probs=80.1
Q ss_pred HHHHHHHHHHHHcCCCeEeC--CCCcCCC----cHHH--HHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHH
Q 028240 42 EDGISIIKHAFSKGITFFDT--ADKYGPY----TNEI--LLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--A~~Yg~g----~~E~--~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~ 112 (211)
++..+..+.+.+.|++.+-. +..|+.- ..+. .+=+++++ .. +++-|..-... .++.+...
T Consensus 150 e~~~~~a~~~~~~Gf~~vKik~g~~~~~~~~~~~~~~~~e~v~avR~~~g-~d~~l~vDan~----------~~~~~~ai 218 (392)
T 3p3b_A 150 ALMQEEAMQGYAKGQRHFKIKVGRGGRHMPLWEGTKRDIAIVRGISEVAG-PAGKIMIDANN----------AYNLNLTK 218 (392)
T ss_dssp HHHHHHHHHHHHTTCCCEEEECCHHHHTSCHHHHHHHHHHHHHHHHHHHC-TTCCEEEECTT----------CCCHHHHH
T ss_pred HHHHHHHHHHHHhCCCEEEECcCcCcccCCccccHHHHHHHHHHHHHHhC-CCCeEEEECCC----------CCCHHHHH
Confidence 55666777788999998653 3222110 0111 11122232 21 23333322211 22454444
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-----CcccEEEeCCCCHHHHHHHhccCCceEEeccCC
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-----GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-----G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 187 (211)
+-++. |+.+ ++.++..|-+ +.++.+.++++. -.+.=.+---++++.++++++....+++|+..+
T Consensus 219 ~~~~~-l~~~-----~i~~iE~P~~-----~d~~~~~~l~~~l~~~g~~iPIa~dE~~~~~~~~~~i~~~~~d~v~ik~~ 287 (392)
T 3p3b_A 219 EVLAA-LSDV-----NLYWLEEAFH-----EDEALYEDLKEWLGQRGQNVLIADGEGLASPHLIEWATRGRVDVLQYDII 287 (392)
T ss_dssp HHHHH-TTTS-----CEEEEECSSS-----CCHHHHHHHHHHHHHHTCCCEEEECCSSCCTTHHHHHHTTSCCEECCBTT
T ss_pred HHHHH-HHhc-----CCCEEecCCc-----ccHHHHHHHHHhhccCCCCccEEecCCCCHHHHHHHHHcCCCCEEEeCcc
Confidence 33333 4443 4556667644 245666666665 334322222456788899998888999999888
Q ss_pred ccccCch--hhHHHHHHHcCCeee
Q 028240 188 LWARDIE--NEIVPLCRFVRLAVK 209 (211)
Q Consensus 188 ~~~~~~~--~~~~~~~~~~gi~v~ 209 (211)
-. +.. ..+...|+++|+.++
T Consensus 288 ~~--Git~~~~i~~~A~~~gi~~~ 309 (392)
T 3p3b_A 288 WP--GFTHWMELGEKLDAHGLRSA 309 (392)
T ss_dssp TB--CHHHHHHHHHHHHHTTCEEC
T ss_pred cc--CHHHHHHHHHHHHHcCCEEE
Confidence 75 432 468999999999875
No 90
>3ik4_A Mandelate racemase/muconate lactonizing protein; structural genomics, enolase, epimerase, PSI-2, protein STRU initiative; 2.10A {Herpetosiphon aurantiacus atcc 23779}
Probab=83.47 E-value=18 Score=29.88 Aligned_cols=148 Identities=11% Similarity=0.090 Sum_probs=89.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+.++.+++.|++.|-.--....-..+...=+++++ .+.-++.|-...+ ++.+... +.
T Consensus 143 ~~e~~~~~a~~~~~~G~~~iK~Kvg~~~~~~d~~~v~avr~~~~~~~l~vDaN~~------------~~~~~A~----~~ 206 (365)
T 3ik4_A 143 DEVHAAASAKAILARGIKSIKVKTAGVDVAYDLARLRAIHQAAPTAPLIVDGNCG------------YDVERAL----AF 206 (365)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEECCSSCHHHHHHHHHHHHHHSSSCCEEEECTTC------------CCHHHHH----HH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCCHHHHHHHHHHHHHhCCCCeEEEECCCC------------CCHHHHH----HH
Confidence 56788888888899999986532211100012222234443 4333444433222 2444332 23
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--hh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--EN 195 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~ 195 (211)
+++|..+-.++.++..|-+.. .++.+.+|+++-.+ -+.|=|-++...+.++++....+++|+..+- -+. ..
T Consensus 207 ~~~L~~~~~~i~~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~--GGit~~~ 280 (365)
T 3ik4_A 207 CAACKAESIPMVLFEQPLPRE----DWAGMAQVTAQSGFAVAADESARSAHDVLRIAREGTASVINIKLMK--AGVAEGL 280 (365)
T ss_dssp HHHHHHTTCCEEEEECCSCTT----CHHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHH--HCHHHHH
T ss_pred HHHHhhCCCCceEEECCCCcc----cHHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHhCCCCEEEEcCCc--cCHHHHH
Confidence 334411234778888885433 35667777765444 3556667899999999988889999998775 332 24
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.+.
T Consensus 281 ~i~~~A~~~gi~~~ 294 (365)
T 3ik4_A 281 KMIAIAQAAGLGLM 294 (365)
T ss_dssp HHHHHHHHHTCEEE
T ss_pred HHHHHHHHcCCeEE
Confidence 68999999999875
No 91
>1kko_A 3-methylaspartate ammonia-lyase; enolase superfamily, TIM barrel; 1.33A {Citrobacter amalonaticus} SCOP: c.1.11.2 d.54.1.1 PDB: 1kkr_A*
Probab=82.35 E-value=16 Score=30.74 Aligned_cols=100 Identities=14% Similarity=0.021 Sum_probs=65.2
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc------CcccEEEeCCCCHHHHHHHhccCCce
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE------GKIKYIGLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~------G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (211)
+++...+- -+.|+..+.. +++ ++..|-+.....+-++.+.+|.++ +.=-..|=+-++...+.++++....+
T Consensus 250 ~~~~A~~~-~~~L~~~~~~-~~l-~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d 326 (413)
T 1kko_A 250 DPVRCAEY-IASLEKEAQG-LPL-YIEGPVDAGNKPDQIRMLTAITKELTRLGSGVKIVADEWCNTYQDIVDFTDAGSCH 326 (413)
T ss_dssp CHHHHHHH-HHHTGGGGTT-SCE-EEECCCCCSSHHHHHHHHHHHHHHHHHHTCCCEEEECTTCCSHHHHHHHHHTTCCS
T ss_pred CHHHHHHH-HHHHHhccCC-cce-EEECCcCCCCCcccHHHHHHHHHhcccCCCCCcEEcCCCCCCHHHHHHHHHhCCCC
Confidence 44444332 2334554443 565 778775433335668888888775 33234455567899999999888889
Q ss_pred EEeccCCccccC-chhhHHHHHHHcCCeee
Q 028240 181 AVQLEWSLWARD-IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 181 ~~q~~~~~~~~~-~~~~~~~~~~~~gi~v~ 209 (211)
++|+..+-.-.- ...++...|+++|+.++
T Consensus 327 ~i~ik~~~~GGitea~~i~~~A~~~gi~~~ 356 (413)
T 1kko_A 327 MVQIKTPDLGGIHNIVDAVLYCNKHGMEAY 356 (413)
T ss_dssp EEEECGGGGSSTHHHHHHHHHHHHHTCEEE
T ss_pred EEEeCccccCCHHHHHHHHHHHHHcCCeEE
Confidence 999987753221 23469999999999875
No 92
>4dye_A Isomerase; enolase family protein, EFI, enzym function initiative; 1.60A {Streptomyces coelicolor} PDB: 2oqh_A
Probab=81.97 E-value=16 Score=30.58 Aligned_cols=146 Identities=10% Similarity=0.121 Sum_probs=86.7
Q ss_pred CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+.++.+++. |++.|=.--..... .+...=+++++.- +++-|..-... .++.+...+ +-+.
T Consensus 168 ~~e~~~~~a~~~~~~~G~~~~K~KvG~~~~-~d~~~v~avR~~~-~~~~l~vDaN~----------~w~~~~A~~-~~~~ 234 (398)
T 4dye_A 168 LPKAMAEHAVRVVEEGGFDAVKLKGTTDCA-GDVAILRAVREAL-PGVNLRVDPNA----------AWSVPDSVR-AGIA 234 (398)
T ss_dssp HHHHHHHHHHHHHHHHCCSEEEEECCSCHH-HHHHHHHHHHHHC-TTSEEEEECTT----------CSCHHHHHH-HHHH
T ss_pred CHHHHHHHHHHHHHhcCCCEEEEecCCCHH-HHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHHHHHH-HHHH
Confidence 357778888888998 99986543221111 2222234444422 34333333321 124444332 3345
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++.+ +..|-+ .++.+.+|+++-.+ -+.|=|-++...+.++++....+++|+..+-.-. ..-..
T Consensus 235 l~~~~i~~-----iEqP~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ 303 (398)
T 4dye_A 235 LEELDLEY-----LEDPCV------GIEGMAQVKAKVRIPLCTNMCVVRFEDFAPAMRLNAVDVIHGDVYKWGGIAATKA 303 (398)
T ss_dssp HGGGCCSE-----EECCSS------HHHHHHHHHHHCCSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhcCCCE-----EcCCCC------CHHHHHHHHhhCCCCEEeCCcCCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHH
Confidence 56666544 445533 57778888776433 3445566888999999998889999987764321 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 304 ia~~A~~~gi~~~ 316 (398)
T 4dye_A 304 LAAHCETFGLGMN 316 (398)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCeEE
Confidence 8999999999875
No 93
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=81.86 E-value=20 Score=29.26 Aligned_cols=136 Identities=12% Similarity=0.045 Sum_probs=74.0
Q ss_pred HHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHHHHhcCCC-CcEEEEeccccccCCC
Q 028240 43 DGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGKALKELPR-ENIQVATKFGFVELGF 99 (211)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~~l~~~~r-~~~~i~tK~~~~~~~~ 99 (211)
+..+..+.|.++|+..+|. + +.||. .-|. ++-+.++.+.. =++-|..|+.+.....
T Consensus 145 ~~~~aA~~a~~aGfDgVeih~~~gyLl~qFlsp~~n~R~d~yGG-slenr~r~~~eiv~avr~~v~~pv~vris~~~~~~ 223 (338)
T 1z41_A 145 EFKQAAARAKEAGFDVIEIHAAHGYLIHEFLSPLSNHRTDEYGG-SPENRYRFLREIIDEVKQVWDGPLFVRVSASDYTD 223 (338)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHCCSCEEEEEECCCCST
T ss_pred HHHHHHHHHHHcCCCEEEeccccchHHHHccCCCcCCcCcccCc-chhhhHHHHHHHHHHHHHHcCCcEEEEecCcccCC
Confidence 3445566778899998873 2 23442 2221 22223322100 0456777876543221
Q ss_pred cccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCcccEEEeCCC-CHHHHHHHhcc
Q 028240 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAV 176 (211)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~ 176 (211)
+ ..+.+.. ..+-+.|+..|++||++---..... .......++.+.++++.=.+--+++... +++..+++++.
T Consensus 224 ~----g~~~~~~-~~~a~~l~~~Gvd~i~v~~~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~s~~~a~~~l~~ 298 (338)
T 1z41_A 224 K----GLDIADH-IGFAKWMKEQGVDLIDCSSGALVHADINVFPGYQVSFAEKIREQADMATGAVGMITDGSMAEEILQN 298 (338)
T ss_dssp T----SCCHHHH-HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCSHHHHHHHHHT
T ss_pred C----CCCHHHH-HHHHHHHHHcCCCEEEEecCccccCCCCCCccchHHHHHHHHHHCCCCEEEECCCCCHHHHHHHHHc
Confidence 1 1244433 3455567788988887743211011 0111123555666666546677787776 79999999988
Q ss_pred CCceEEec
Q 028240 177 HPITAVQL 184 (211)
Q Consensus 177 ~~~~~~q~ 184 (211)
...+.+++
T Consensus 299 G~aD~V~i 306 (338)
T 1z41_A 299 GRADLIFI 306 (338)
T ss_dssp TSCSEEEE
T ss_pred CCceEEee
Confidence 76777765
No 94
>4h83_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, enzyme function initiative; 2.09A {Marine actinobacterium PHSC20C1} PDB: 3no1_A 3msy_A
Probab=81.17 E-value=10 Score=31.63 Aligned_cols=171 Identities=11% Similarity=0.019 Sum_probs=93.3
Q ss_pred eeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHH--HHHHHhcCCCCcEEE
Q 028240 11 RVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEIL--LGKALKELPRENIQV 88 (211)
Q Consensus 11 ~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~--lG~~l~~~~r~~~~i 88 (211)
+..||...-+++....+... + .+.++..+.++.+.+.|++.|=.--. +.. .++- .=+++++.-.+++.|
T Consensus 142 ~~LLGg~~~~~~~y~~~~~~-----~--~~~~~~~~~~~~~~~~G~~~~Kikvg-~~~-~~~d~~~v~avR~~~G~~~~l 212 (388)
T 4h83_A 142 WKLWGGYRNELPMIAIGGYY-----G--EPLGSIADEMHNYQELGLAGVKFKVG-GLS-AAEDAARITAAREAAGDDFII 212 (388)
T ss_dssp HHHTTCSCSEEEEEEEECCT-----T--CTTCSHHHHHHHHHHHTBSEEEEECS-SSC-HHHHHHHHHHHHHHHCSSSEE
T ss_pred hhhcCCCcCceEEEeecccc-----C--CCHHHHHHHHHHHHHcCCceEeecCC-CCC-HHHHHHHHHHHHHhcCCCeEE
Confidence 33455444445554444321 1 13345556678888999998643221 111 2221 223344311233333
Q ss_pred EeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCH
Q 028240 89 ATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASP 167 (211)
Q Consensus 89 ~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~ 167 (211)
..-... .++.+... +.++.|. -.++.++..|-+ ..+-++.+.++++...+ -+.|=|-++.
T Consensus 213 ~vDaN~----------~~~~~~A~----~~~~~l~--~~~~~~iEeP~~---~~~d~~~~~~l~~~~~ipIa~dE~~~~~ 273 (388)
T 4h83_A 213 CIDANQ----------GYKPAVAV----DLSRRIA--DLNIRWFEEPVE---WHNDKRSMRDVRYQGSVPVCAGQTEFSA 273 (388)
T ss_dssp EEECTT----------CBCHHHHH----HHHHHTT--TSCCCCEESCBC---STTHHHHHHHHHHHSSSCEEECTTCSSH
T ss_pred EEecCc----------CCCHHHHH----HHHHHhh--hcCcceeecCcc---cccchHHHHHHHhhcCCCccCCccccCh
Confidence 322221 12343332 2233332 235566666632 22356677777776554 3566677999
Q ss_pred HHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 168 DTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
..+.++++....+++|+...-.=- ..-..+...|+.+||.|.
T Consensus 274 ~~~~~~i~~~a~d~i~~d~~~~GGit~~~kia~~A~~~gv~v~ 316 (388)
T 4h83_A 274 SGCRDLMETGAIDVCNFDSSWSGGPTAWLRTAAIATSYDVQMG 316 (388)
T ss_dssp HHHHHHHHHTCCSEECCCGGGTTCHHHHHHHHHHHHHTTCEEC
T ss_pred HhHHHHHHcCCCCeEeecceeCCCHHHHHHHHHHHHHCCCEEE
Confidence 999999998889999987764211 012468899999999874
No 95
>3fv9_G Mandelate racemase/muconate lactonizing enzyme; structural genomics, mandelate racemase/muconatelactonizing hydrolase, PSI-2; 1.90A {Roseovarius nubinhibens ism} PDB: 2pce_A
Probab=81.14 E-value=23 Score=29.50 Aligned_cols=148 Identities=10% Similarity=-0.114 Sum_probs=89.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCC-cC-CCcHH--HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADK-YG-PYTNE--ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCC 115 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~-Yg-~g~~E--~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~ 115 (211)
++++..+.++.+++.|++.|-.--. +. .+.-+ ...=+++++.-.+++-|....... ++.+. .
T Consensus 145 ~~e~~~~~a~~~~~~G~~~~K~Kvg~~~~~~~~~~d~~~v~avR~a~G~~~~L~vDaN~~----------~~~~~----A 210 (386)
T 3fv9_G 145 TPEAMRAKVARHRAQGFKGHSIKIGASEAEGGPALDAERITACLADRQPGEWYLADANNG----------LTVEH----A 210 (386)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCCCTTTTHHHHHHHHHHHHTTTCCTTCEEEEECTTC----------CCHHH----H
T ss_pred CHHHHHHHHHHHHHCCCCEEEEeccCCCCCCCHHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHH----H
Confidence 5788888888899999998764321 10 01112 222344554323445555444321 24333 2
Q ss_pred HHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cc
Q 028240 116 EASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DI 193 (211)
Q Consensus 116 ~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~ 193 (211)
.+.+++|. +..++ ++..|-+ .++.+.+++++-.+. +.|=|-++...+.++++....+++|+..+-.=. ..
T Consensus 211 ~~~~~~l~-~~~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~ 282 (386)
T 3fv9_G 211 LRMLSLLP-PGLDI-VLEAPCA------SWAETKSLRARCALPLLLDELIQTETDLIAAIRDDLCDGVGLKVSKQGGITP 282 (386)
T ss_dssp HHHHHHSC-SSCCC-EEECCCS------SHHHHHHHHTTCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHH
T ss_pred HHHHHHhh-ccCCc-EEecCCC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEEECccccCCHHH
Confidence 33445553 34566 6777744 356677777764443 445566889999999998888999997765311 11
Q ss_pred hhhHHHHHHHcCCeee
Q 028240 194 ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 194 ~~~~~~~~~~~gi~v~ 209 (211)
...+...|+++|+.+.
T Consensus 283 ~~~i~~~A~~~gi~~~ 298 (386)
T 3fv9_G 283 MLRQRAIAAAAGMVMS 298 (386)
T ss_dssp HHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHcCCEEE
Confidence 3468999999999986
No 96
>3my9_A Muconate cycloisomerase; structural genomics, PSI-2, protein structure INI NEW YORK SGX research center for structural genomics, nysgx; 2.20A {Azorhizobium caulinodans}
Probab=80.68 E-value=13 Score=30.89 Aligned_cols=150 Identities=10% Similarity=0.071 Sum_probs=84.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+..+.+++.|++.|-.--.-.+-..+...=+++++.-.+++-+....... ++.+...+ +-+.|
T Consensus 146 ~~~~~~~~a~~~~~~G~~~~K~Kvg~~~~~~d~~~v~avR~~~g~~~~l~vDan~~----------~~~~~A~~-~~~~l 214 (377)
T 3my9_A 146 DFDADLERMRAMVPAGHTVFKMKTGVKPHAEELRILETMRGEFGERIDLRLDFNQA----------LTPFGAMK-ILRDV 214 (377)
T ss_dssp SHHHHHHHHHHHTTTTCCEEEEECSSSCHHHHHHHHHHHHHHHGGGSEEEEECTTC----------CCTTTHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEccCCCcHHHHHHHHHHHHHHhCCCCeEEEeCCCC----------cCHHHHHH-HHHHH
Confidence 45666666778888999987643211110012222344443212333444343211 12222222 33455
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++++|+ .|-+. +.++.+.+++++-.+. +.|=+-++..++.++++....+++|+..+-.=. ..-..+
T Consensus 215 ~~~~i~~iE-----qP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~~~d~v~~k~~~~GGit~~~~i 285 (377)
T 3my9_A 215 DAFRPTFIE-----QPVPR----RHLDAMAGFAAALDTPILADESCFDAVDLMEVVRRQAADAISVKIMKCGGLMKAQSL 285 (377)
T ss_dssp HTTCCSCEE-----CCSCT----TCHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEECCHHHHTSHHHHHHH
T ss_pred hhcCCCEEE-----CCCCc----cCHHHHHHHHHhCCCCEEECCccCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 666766553 45332 2367777777763343 445556889999999988888999987664211 113468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 286 ~~~a~~~gi~~~ 297 (377)
T 3my9_A 286 MAIADTAGLPGY 297 (377)
T ss_dssp HHHHHHHTCCEE
T ss_pred HHHHHHcCCeEe
Confidence 999999999874
No 97
>4a35_A Mitochondrial enolase superfamily member 1; isomerase; 1.74A {Homo sapiens}
Probab=80.64 E-value=26 Score=29.82 Aligned_cols=150 Identities=7% Similarity=0.033 Sum_probs=88.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
.++++..+..+.+++.|++.|-.--.-... .+...=+++++.-.+++-|...... .++.+...+- -+.
T Consensus 200 ~~~e~~~~~a~~~~~~Gf~~~KlKvG~~~~-~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~~-~~~ 267 (441)
T 4a35_A 200 YSDDTLKQLCAQALKDGWTRFKVKVGADLQ-DDMRRCQIIRDMIGPEKTLMMDANQ----------RWDVPEAVEW-MSK 267 (441)
T ss_dssp CCHHHHHHHHHHHHHTTCCEEEEECSSCHH-HHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHHH-HHH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEcCCCCHH-HHHHHHHHHHHHhCCCCeEEEECCC----------CCCHHHHHHH-HHh
Confidence 467888888999999999988643211100 1112223444421233444433322 1244332222 223
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH----cCcccEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cc
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE----EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DI 193 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~----~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~ 193 (211)
|+.+ +++++..|-+..+ ++.+.++++ .+.=-+.|=+-++...+.++++....+++|+..+-.=. ..
T Consensus 268 L~~~-----~~~~iEeP~~~~d----~~~~~~l~~~l~~~~iPIa~gE~~~~~~~~~~~l~~~a~div~~d~~~~GGit~ 338 (441)
T 4a35_A 268 LAKF-----KPLWIEEPTSPDD----ILGHATISKALVPLGIGIATGEQCHNRVIFKQLLQAKALQFLQIDSCRLGSVNE 338 (441)
T ss_dssp HGGG-----CCSEEECCSCTTC----HHHHHHHHHHHGGGTCEEEECTTCCSHHHHHHHHHTTCCSEECCCTTTSSHHHH
T ss_pred hccc-----CccEEeCCCCccc----HHHHHHHHHhccCCCCCEEeCCccccHHHHHHHHHcCCCCEEEECccccCCHHH
Confidence 3443 4566677754333 445555555 34444666677899999999998889999998775321 12
Q ss_pred hhhHHHHHHHcCCeee
Q 028240 194 ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 194 ~~~~~~~~~~~gi~v~ 209 (211)
-..+...|+++|+.+.
T Consensus 339 ~~kia~lA~~~gv~v~ 354 (441)
T 4a35_A 339 NLSVLLMAKKFEIPVC 354 (441)
T ss_dssp HHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHcCCEEE
Confidence 3468999999999874
No 98
>2ftp_A Hydroxymethylglutaryl-COA lyase; structural genomics, PSI, protein structure initiativ midwest center for structural genomics, MCSG; 2.40A {Pseudomonas aeruginosa}
Probab=80.30 E-value=4.4 Score=32.70 Aligned_cols=101 Identities=9% Similarity=0.012 Sum_probs=60.6
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEecc
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (211)
++.+. +..+-+.|.++|+++|..-....|.....+.+.++.+..+.+...++..++. -+.+.++++++.. ++.+.+.
T Consensus 27 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~aG-~~~v~i~ 103 (302)
T 2ftp_A 27 IEVAD-KIRLVDDLSAAGLDYIEVGSFVSPKWVPQMAGSAEVFAGIRQRPGVTYAALA-PNLKGFEAALESG-VKEVAVF 103 (302)
T ss_dssp CCHHH-HHHHHHHHHHTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTSEEEEEC-CSHHHHHHHHHTT-CCEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCcCEEEECCCcCccccccccCHHHHHHHhhhcCCCEEEEEe-CCHHHHHHHHhCC-cCEEEEE
Confidence 34444 4556667788999999998755553221122344445555545566666665 4778888888753 4444443
Q ss_pred CCccc--------cC------chhhHHHHHHHcCCeee
Q 028240 186 WSLWA--------RD------IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 186 ~~~~~--------~~------~~~~~~~~~~~~gi~v~ 209 (211)
.+..+ .. .-.+++++|+++|+.|.
T Consensus 104 ~~~s~~~~~~~~~~s~ee~l~~~~~~v~~a~~~G~~V~ 141 (302)
T 2ftp_A 104 AAASEAFSQRNINCSIKDSLERFVPVLEAARQHQVRVR 141 (302)
T ss_dssp EESCHHHHHHHHSSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred EecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 32211 11 12468899999999885
No 99
>4e5t_A Mandelate racemase / muconate lactonizing enzyme, terminal domain protein; aldolase, structural genomics, biology; 2.90A {Labrenzia alexandrii}
Probab=79.71 E-value=26 Score=29.32 Aligned_cols=150 Identities=10% Similarity=0.017 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--CcC--CCc------HH--HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD--KYG--PYT------NE--ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg--~g~------~E--~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s 107 (211)
++++..+..+.+++.|++.|-.-. .|. .|. -+ ...=+++++.-.+++-|...... .++
T Consensus 151 ~~e~~~~~a~~~~~~G~~~~KlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~ 220 (404)
T 4e5t_A 151 DADMAAEAAAKAVDQGFTAVKFDPAGAYTIYDGHQPSLEDLERSEAFCKQIRAAVGTKADLLFGTHG----------QFT 220 (404)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCSBCCCHHHHHHHHHHHHHHHHHHGGGSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEeeCCCCCCcccccccccHHHHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CcC
Confidence 678888888899999999987532 111 010 11 11223444321234445444321 124
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccC
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
.+...+ +-+.|+.++++++ ..|-+.. .++.+.++++.-.+. ..|=+-++.+.++++++....+++|+..
T Consensus 221 ~~~A~~-~~~~l~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 290 (404)
T 4e5t_A 221 VSGAKR-LARRLEAYDPLWF-----EEPIPPE----KPEDMAEVARYTSIPVATGERLCTKYEFSRVLETGAASILQMNL 290 (404)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCTT----CHHHHHHHHHHCSSCEEECTTCCHHHHHHHHHHHTCCSEECCCT
T ss_pred HHHHHH-HHHHHhhcCCcEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHhCCCCEEecCc
Confidence 444333 3345677776554 4553322 356777787764444 3344457788999999988899999987
Q ss_pred Ccccc-CchhhHHHHHHHcCCeee
Q 028240 187 SLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 187 ~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+-.=- ..-..+...|+++|+.+.
T Consensus 291 ~~~GGit~~~~ia~~A~~~gi~~~ 314 (404)
T 4e5t_A 291 GRVGGLLEAKKIAAMAECHSAQIA 314 (404)
T ss_dssp TTSSCHHHHHHHHHHHHHTTCEEC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEe
Confidence 75321 123468999999999874
No 100
>3u9i_A Mandelate racemase/muconate lactonizing enzyme, C domain protein; structural genomics, PSI-biology; 2.90A {Roseiflexus SP}
Probab=79.24 E-value=13 Score=31.07 Aligned_cols=148 Identities=14% Similarity=0.099 Sum_probs=87.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC--------cHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPY--------TNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEY 110 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g--------~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~ 110 (211)
++++..+.++.+++.|++.|=.--...++ ..+...=+++++ .+.-++.|-...+ ++.+.
T Consensus 165 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~~~~~~~di~~v~avR~a~~d~~L~vDaN~~------------w~~~~ 232 (393)
T 3u9i_A 165 SVTAAARAAQAIVARGVTTIKIKIGAGDPDATTIRTMEHDLARIVAIRDVAPTARLILDGNCG------------YTAPD 232 (393)
T ss_dssp -CHHHHHHHHHHHTTTCCEEEEECC-------CHHHHHHHHHHHHHHHHHSTTSEEEEECCSC------------CCHHH
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEeCCCcccccccccHHHHHHHHHHHHHHCCCCeEEEEccCC------------CCHHH
Confidence 44677777888899999986432111100 011122233443 4322333322222 23333
Q ss_pred HHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcc
Q 028240 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLW 189 (211)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~ 189 (211)
..+.+++|.-+-+++.++..|-+..+ ++.+.+|+++-.+ -+.|=|-++...+.++++...++++|+..+.
T Consensus 233 ----A~~~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~i~~k~~~- 303 (393)
T 3u9i_A 233 ----ALRLLDMLGVHGIVPALFEQPVAKDD----EEGLRRLTATRRVPVAADESVASATDAARLARNAAVDVLNIKLMK- 303 (393)
T ss_dssp ----HHHHHHTTTTTTCCCSEEECCSCTTC----TTHHHHHHHTCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHH-
T ss_pred ----HHHHHHHHhhCCCCeEEEECCCCCCc----HHHHHHHHhhCCCcEEeCCcCCCHHHHHHHHHcCCCCEEEecccc-
Confidence 22344555223457788888854332 4566667665333 3667777899999999998889999998776
Q ss_pred ccCc--hhhHHHHHHHcCCeee
Q 028240 190 ARDI--ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 190 ~~~~--~~~~~~~~~~~gi~v~ 209 (211)
-+. ...+...|+++|+.+.
T Consensus 304 -GGit~~~~ia~~A~~~gi~~~ 324 (393)
T 3u9i_A 304 -CGIVEALDIAAIARTAGLHLM 324 (393)
T ss_dssp -HCHHHHHHHHHHHHHHTCEEE
T ss_pred -cCHHHHHHHHHHHHHcCCeEE
Confidence 332 2468999999999875
No 101
>2akz_A Gamma enolase, neural; fluoride inhibition, negative cooperativity, glycolysis, , isothermal titration calorimetry, lyase; 1.36A {Homo sapiens} SCOP: c.1.11.1 d.54.1.1 PDB: 2akm_A 1te6_A 2psn_A 3b97_A 2xsx_A 1pdz_A 1pdy_A
Probab=78.81 E-value=18 Score=30.85 Aligned_cols=95 Identities=13% Similarity=0.039 Sum_probs=67.4
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC--CCHHHHHHHhccCCceEEe
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 183 (211)
++++...+.+.+.++.+ +++++..|-+..+ |+.+.+|.++..|.=.|=-. ++++.+.++++....+++|
T Consensus 270 ~t~~e~~~~~~~ll~~y-----~i~~IEdPl~~dD----~~g~~~L~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 340 (439)
T 2akz_A 270 ITGDQLGALYQDFVRDY-----PVVSIEDPFDQDD----WAAWSKFTANVGIQIVGDDLTVTNPKRIERAVEEKACNCLL 340 (439)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHTCSSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CCcEEECCCCccc----HHHHHHHHhCCCCEEEeCCCccCCHHHHHHHHHhCCCCEEE
Confidence 35666666666666654 4678888855433 78888888887776555333 4899999999988888999
Q ss_pred ccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 184 LEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 184 ~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+..|-.-. ....++...|+++|+.++
T Consensus 341 iKv~qiGGitea~~ia~lA~~~g~~~~ 367 (439)
T 2akz_A 341 LKVNQIGSVTEAIQACKLAQENGWGVM 367 (439)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEE
T ss_pred echhhcCCHHHHHHHHHHHHHCCCeEE
Confidence 87763211 123468999999999864
No 102
>3ugv_A Enolase; enzyme function initiative, EFI, lyase; 2.30A {Alpha proteobacterium BAL199}
Probab=78.69 E-value=24 Score=29.34 Aligned_cols=150 Identities=9% Similarity=-0.004 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHc---CCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSK---GITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~---Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
++++..+.++.+++. |++.|-.--....-..+...=+++++.-.+++-|...... .++.+...+ +-
T Consensus 171 ~~e~~~~~a~~~~~~~~~G~~~iKlKvG~~~~~~d~~~v~avR~a~G~~~~l~vDaN~----------~~~~~~A~~-~~ 239 (390)
T 3ugv_A 171 PAEVAAEAVELKAEGQGTGFKGLKLRMGRDDPAVDIETAEAVWDAVGRDTALMVDFNQ----------GLDMAEAMH-RT 239 (390)
T ss_dssp HHHHHHHHHHHHHTTCTTCCSEEEEECCCSSHHHHHHHHHHHHHHHCTTSEEEEECTT----------CCCHHHHHH-HH
T ss_pred CHHHHHHHHHHHHHhhhCCCcEEEEecCCCCHHHHHHHHHHHHHHhCCCCEEEEECCC----------CCCHHHHHH-HH
Confidence 567778888888999 9998764321111012222334444421234444444321 124443322 23
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.|+.+++. ++..|-+.. .++.+.+++++-.+. +.|=|-++...++++++....+++|+..+-.=. ...
T Consensus 240 ~~l~~~~i~-----~iEqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~ 310 (390)
T 3ugv_A 240 RQIDDLGLE-----WIEEPVVYD----NFDGYAQLRHDLKTPLMIGENFYGPREMHQALQAGACDLVMPDFMRIGGVSGW 310 (390)
T ss_dssp HHHTTSCCS-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCSHHHHHHHHHTTCCSEECCBHHHHTHHHHH
T ss_pred HHHHhhCCC-----EEECCCCcc----cHHHHHHHHHhcCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 344555554 445664332 356677777654443 555566899999999998889999987764311 112
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 311 ~~i~~~A~~~gi~~~ 325 (390)
T 3ugv_A 311 MRAAGVAGAWGIPMS 325 (390)
T ss_dssp HHHHHHHHHHTCCBC
T ss_pred HHHHHHHHHcCCEEe
Confidence 468999999999874
No 103
>1nsj_A PRAI, phosphoribosyl anthranilate isomerase; thermostability; 2.00A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1lbm_A 1dl3_A
Probab=78.58 E-value=6.8 Score=29.77 Aligned_cols=64 Identities=13% Similarity=0.158 Sum_probs=42.1
Q ss_pred hhcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCceEEeccC
Q 028240 120 RRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
..+|.||+=+.+. -+.+ ..+.+.+- .+.+.. ...+..+||. |.+++.+.+..+...++++|++-
T Consensus 19 ~~~GaD~iGfif~-~~SpR~V~~~~a~-~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG 84 (205)
T 1nsj_A 19 VESGADAVGFVFY-PKSKRYISPEDAR-RISVEL-PPFVFRVGVFVNEEPEKILDVASYVQLNAVQLHG 84 (205)
T ss_dssp HHHTCSEEEEECC-TTCTTBCCHHHHH-HHHHHS-CSSSEEEEEESSCCHHHHHHHHHHHTCSEEEECS
T ss_pred HHcCCCEEEEEec-CCCCCcCCHHHHH-HHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECC
Confidence 4679999988853 2222 23443332 222221 2468899985 57888999998888999999974
No 104
>3go2_A Putative L-alanine-DL-glutamate epimerase; structural genomics, isomerase, PSI-2; 1.70A {Burkholderia xenovorans} PDB: 2oo6_A 3sn0_A 3sn1_A* 3sn4_A*
Probab=78.46 E-value=29 Score=29.11 Aligned_cols=146 Identities=9% Similarity=0.048 Sum_probs=86.9
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCC---------Cc--CCC------c---------HHHHHHHHHhcCCCCcEEEEecc
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTAD---------KY--GPY------T---------NEILLGKALKELPRENIQVATKF 92 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~---------~Y--g~g------~---------~E~~lG~~l~~~~r~~~~i~tK~ 92 (211)
.++++..+..+.+++.|++.|=.-- .+ |.+ . ..+.+ +++++.-.+++-|....
T Consensus 142 ~~~e~~~~~a~~~~~~Gf~~iKlKv~~~~~~~~~~~~pG~~~~~~~~~~~~~~~~~~~~e~v-~avR~avG~d~~l~vDa 220 (409)
T 3go2_A 142 TDLDGVKRTAEEARERQFRAIKTNIFIHDDGPLHAWRPGFAVPFQPALNVDRKVLRNLRAHL-EALRDGAGPDVEILLDL 220 (409)
T ss_dssp CSHHHHHHHHHHHHHTTCCEEEECCEECSSSSCEECBGGGTBSCCTTCCCCHHHHHHHHHHH-HHHHHHHCTTSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEcccccccccccccccCCCccCCcccccchHHHHHHHHHH-HHHHHHhCCCCEEEEEC
Confidence 3678888888999999999864211 01 110 0 01222 34443212344444443
Q ss_pred ccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHH
Q 028240 93 GFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIR 171 (211)
Q Consensus 93 ~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~ 171 (211)
.. .++.+...+ +-+.|+.+++++|. .|.. .++.+.++++.-.+. ..|=+-++++.++
T Consensus 221 N~----------~~~~~~A~~-~~~~L~~~~i~~iE-----~P~~------d~~~~~~l~~~~~iPIa~dE~~~~~~~~~ 278 (409)
T 3go2_A 221 NF----------NAKPEGYLK-ILRELADFDLFWVE-----IDSY------SPQGLAYVRNHSPHPISSCETLFGIREFK 278 (409)
T ss_dssp TT----------CSCHHHHHH-HHHHTTTSCCSEEE-----CCCS------CHHHHHHHHHTCSSCEEECTTCCHHHHHH
T ss_pred CC----------CCCHHHHHH-HHHHHhhcCCeEEE-----eCcC------CHHHHHHHHhhCCCCEEeCCCcCCHHHHH
Confidence 21 124443332 23455666666555 4421 456678888775554 3333457788999
Q ss_pred HHhccCCceEEeccCCccccCch--hhHHHHHHHcCCeee
Q 028240 172 RAHAVHPITAVQLEWSLWARDIE--NEIVPLCRFVRLAVK 209 (211)
Q Consensus 172 ~~~~~~~~~~~q~~~~~~~~~~~--~~~~~~~~~~gi~v~ 209 (211)
++++....+++|+..+- -+.. ..+...|+++|+.+.
T Consensus 279 ~~i~~~~~d~v~~k~~~--GGit~~~~ia~~A~~~gi~~~ 316 (409)
T 3go2_A 279 PFFDANAVDVAIVDTIW--NGVWQSMKIAAFADAHDINVA 316 (409)
T ss_dssp HHHHTTCCSEEEECHHH--HCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHhCCCCEEEeCCCC--CCHHHHHHHHHHHHHcCCEEe
Confidence 99998889999998753 3332 468999999999885
No 105
>3rcy_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, protein structure initiative; HET: RIB; 1.99A {Roseovarius SP} PDB: 3t4w_A
Probab=78.06 E-value=31 Score=29.24 Aligned_cols=150 Identities=7% Similarity=0.009 Sum_probs=90.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--C----cCCCcH----H--HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD--K----YGPYTN----E--ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~--~----Yg~g~~----E--~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s 107 (211)
++++..+..+.+++.|++.|-.-. . +|.... + ...=+++++.-.+++-|...... .++
T Consensus 146 ~~e~~~~~a~~~~~~Gf~~iKlk~g~~~~~~~G~~~~~~~~~~d~e~v~avR~avG~d~~L~vDan~----------~~t 215 (433)
T 3rcy_A 146 SADMAAESAADCVARGYTAVKFDPAGPYTLRGGHMPAMTDISLSVEFCRKIRAAVGDKADLLFGTHG----------QFT 215 (433)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCcccccCCCcchhhHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCC
Confidence 678888889999999999887521 1 121111 1 11223444321234455544432 124
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccC
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
.+...+ +-+.|+.+++.+| ..|-+. +.++.+.++++.-.+. +.|=+-++.+.++++++....+++|+..
T Consensus 216 ~~~A~~-~~~~Le~~~i~~i-----EeP~~~----~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~g~~D~v~~d~ 285 (433)
T 3rcy_A 216 TAGAIR-LGQAIEPYSPLWY-----EEPVPP----DNVGAMAQVARAVRIPVATGERLTTKAEFAPVLREGAAAILQPAL 285 (433)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCT----TCHHHHHHHHHHSSSCEEECTTCCSHHHHHHHHHTTCCSEECCCH
T ss_pred HHHHHH-HHHHhhhcCCCEE-----ECCCCh----hhHHHHHHHHhccCCCEEecCCCCCHHHHHHHHHcCCCCEEEeCc
Confidence 444333 3345666776544 555432 2467777887764444 4455568899999999988899999876
Q ss_pred Ccccc-CchhhHHHHHHHcCCeee
Q 028240 187 SLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 187 ~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+-.=. ..-..+...|+.+|+.+.
T Consensus 286 ~~~GGit~~~kia~lA~~~gv~~~ 309 (433)
T 3rcy_A 286 GRAGGIWEMKKVAAMAEVYNAQMA 309 (433)
T ss_dssp HHHTHHHHHHHHHHHHHTTTCEEC
T ss_pred hhcCCHHHHHHHHHHHHHcCCEEE
Confidence 64211 113468999999999874
No 106
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=77.64 E-value=29 Score=28.68 Aligned_cols=67 Identities=13% Similarity=0.108 Sum_probs=44.4
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEec
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (211)
..+-+.|+..|+++|++ |.... ... .-++.+.++++.=.+--|++...+++..+++++....+.+++
T Consensus 253 ~~~a~~l~~~G~d~i~v---~~~~~~~~~~--~~~~~~~~i~~~~~iPvi~~Ggi~~~~a~~~l~~g~aD~V~i 321 (365)
T 2gou_A 253 TAAAALLNKHRIVYLHI---AEVDWDDAPD--TPVSFKRALREAYQGVLIYAGRYNAEKAEQAINDGLADMIGF 321 (365)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCBTTBCCC--CCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEC
T ss_pred HHHHHHHHHcCCCEEEE---eCCCcCCCCC--ccHHHHHHHHHHCCCcEEEeCCCCHHHHHHHHHCCCcceehh
Confidence 34556677889877766 43211 111 113456666666567788888889999999998877777765
No 107
>3ro6_B Putative chloromuconate cycloisomerase; TIM barrel; 2.20A {Methylococcus capsulatus} PDB: 3rit_A
Probab=77.64 E-value=19 Score=29.50 Aligned_cols=149 Identities=9% Similarity=0.024 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+..+.+++.|++.|..--.... ..+...=+++++.-.+++-+...... .++.+...+ +-+.|
T Consensus 140 ~~~~~~~~a~~~~~~G~~~~K~K~G~~~-~~d~~~v~avR~~~g~~~~l~vDan~----------~~~~~~a~~-~~~~l 207 (356)
T 3ro6_B 140 PVEETLAEAREHLALGFRVLKVKLCGDE-EQDFERLRRLHETLAGRAVVRVDPNQ----------SYDRDGLLR-LDRLV 207 (356)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSCH-HHHHHHHHHHHHHHTTSSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEEEEeCCCH-HHHHHHHHHHHHHhCCCCEEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 5677788888899999999875421110 12222234444421234444444322 124443332 33566
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccC-CceEEeccCCcccc-Cchhh
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVH-PITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~-~~~~~q~~~~~~~~-~~~~~ 196 (211)
+.+++++|. .|-+.. .++.+.+++++-.+. ..|=+-++..+++++++.. ..+++|+..+-.-. .....
T Consensus 208 ~~~~i~~iE-----qP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~ 278 (356)
T 3ro6_B 208 QELGIEFIE-----QPFPAG----RTDWLRALPKAIRRRIAADESLLGPADAFALAAPPAACGIFNIKLMKCGGLAPARR 278 (356)
T ss_dssp HHTTCCCEE-----CCSCTT----CHHHHHTSCHHHHHTEEESTTCCSHHHHHHHHSSSCSCSEEEECHHHHCSHHHHHH
T ss_pred HhcCCCEEE-----CCCCCC----cHHHHHHHHhcCCCCEEeCCcCCCHHHHHHHHhcCCcCCEEEEcccccCCHHHHHH
Confidence 677776664 453322 355666665542332 4455568899999999988 88999987664211 11346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 279 i~~~a~~~gi~~~ 291 (356)
T 3ro6_B 279 IATIAETAGIDLM 291 (356)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCEEE
Confidence 8999999999875
No 108
>1nvm_A HOA, 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: a.5.7.1 c.1.10.5
Probab=77.53 E-value=5.3 Score=32.86 Aligned_cols=103 Identities=13% Similarity=0.128 Sum_probs=56.6
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEE-----EeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeC--C-CCHHHHHHHhcc
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLY-----YQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLS--E-ASPDTIRRAHAV 176 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~-----~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs--~-~~~~~l~~~~~~ 176 (211)
++.+... .+-+.|.+.|+++|.+= -.-.|.........|+.++++++. ..++...+. + ...+.++++.+.
T Consensus 27 ~~~e~k~-~i~~~L~~~Gvd~IEvG~~~g~p~ssp~~g~~~~~~~e~l~~i~~~~~~~~i~~l~~p~~~~~~~i~~a~~a 105 (345)
T 1nvm_A 27 YTLDDVR-AIARALDKAKVDSIEVAHGDGLQGSSFNYGFGRHTDLEYIEAVAGEISHAQIATLLLPGIGSVHDLKNAYQA 105 (345)
T ss_dssp CCHHHHH-HHHHHHHHHTCSEEECSCTTSTTCCBTTTBCCSSCHHHHHHHHHTTCSSSEEEEEECBTTBCHHHHHHHHHH
T ss_pred CCHHHHH-HHHHHHHHcCCCEEEEecCCCCCCCCCcccCCCCCHHHHHHHHHhhCCCCEEEEEecCCcccHHHHHHHHhC
Confidence 4454444 44456677999988883 222222111223467777777665 345555552 2 245667777665
Q ss_pred CCceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 177 HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 177 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
.++.+.+..++-+-..-.+.+++|+++|+.++.
T Consensus 106 -Gvd~v~I~~~~s~~~~~~~~i~~ak~~G~~v~~ 138 (345)
T 1nvm_A 106 -GARVVRVATHCTEADVSKQHIEYARNLGMDTVG 138 (345)
T ss_dssp -TCCEEEEEEETTCGGGGHHHHHHHHHHTCEEEE
T ss_pred -CcCEEEEEEeccHHHHHHHHHHHHHHCCCEEEE
Confidence 333343333322212235789999999998763
No 109
>3s5s_A Mandelate racemase/muconate lactonizing enzyme FA protein; PSI-biology, structural genomics, NEW YORK structural genomi research consortium; 2.40A {Sorangium cellulosum}
Probab=77.20 E-value=30 Score=28.74 Aligned_cols=147 Identities=16% Similarity=0.098 Sum_probs=89.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcC-CCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYG-PYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg-~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
++++..+.++.+++.|++.|=.--... .....+.+ +++++ .+..++.|-...+ ++.+... +
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlKvg~~~~~~d~~~v-~avR~~~~~~~L~vDaN~~------------w~~~~A~----~ 206 (389)
T 3s5s_A 144 SPERAEEAARRAAAMGFRALKVKVGGRLAASDPARI-EAIHAAAPGASLILDGNGG------------LTAGEAL----A 206 (389)
T ss_dssp CSHHHHHHHHHHHHHTCCEEEEECCGGGTTTHHHHH-HHHHHHCTTCEEEEECTTC------------SCHHHHH----H
T ss_pred CHHHHHHHHHHHHHcCCCeEEEEecCCChHHHHHHH-HHHHHhCCCCeEEEECCCC------------CCHHHHH----H
Confidence 457777778888999999864321111 11133334 34443 4433333332222 2443332 2
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--h
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--E 194 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~ 194 (211)
.+++|..+-.++.++..|-+..+ ++.+.+|.+.-.+ -+.|=|-++...+.++++....+++|+..+- -+. .
T Consensus 207 ~~~~L~~~~~~i~~iEeP~~~~d----~~~~~~l~~~~~iPIa~dEs~~~~~~~~~~i~~~a~d~v~~k~~~--GGit~~ 280 (389)
T 3s5s_A 207 LVAHARRLGADVALLEQPVPRDD----WDGMKEVTRRAGVDVAADESAASAEDVLRVAAERAATVVNIKLMK--GGIAEA 280 (389)
T ss_dssp HHHHHHHTTCEEEEEECCSCTTC----HHHHHHHHHHSSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHH--HHHHHH
T ss_pred HHHHHhhCCCCeEEEECCCCccc----HHHHHHHHhhCCCCEEECCCCCCHHHHHHHHHcCCCCEEEecCCC--CCHHHH
Confidence 33444113458889998865433 5666667665333 4667777899999999998889999998775 322 2
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 281 ~~i~~~A~~~gi~~~ 295 (389)
T 3s5s_A 281 LDIAAVARAAGLGLM 295 (389)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCeEE
Confidence 458899999999875
No 110
>3qld_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, isomerase; HET: MSE; 1.85A {Alicyclobacillus acidocaldarius LAA1}
Probab=77.06 E-value=31 Score=28.71 Aligned_cols=144 Identities=13% Similarity=0.078 Sum_probs=86.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+.++.+++.|++.|=.-- |.+...+.+ +++++ .+.-++.+-...++ +.+.... + +.
T Consensus 149 ~~e~~~~~~~~~~~~G~~~~K~Kv--~~~~d~~~v-~avR~~~~~~~l~vDaN~~~------------~~~~A~~-~-~~ 211 (388)
T 3qld_A 149 SLDVLIQSVDAAVEQGFRRVKLKI--APGRDRAAI-KAVRLRYPDLAIAADANGSY------------RPEDAPV-L-RQ 211 (388)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEEC--BTTBSHHHH-HHHHHHCTTSEEEEECTTCC------------CGGGHHH-H-HH
T ss_pred CHHHHHHHHHHHHHhCCCeEEEEe--CcHHHHHHH-HHHHHHCCCCeEEEECCCCC------------ChHHHHH-H-HH
Confidence 478888888999999999854321 122233444 33443 42223333322222 3333332 3 34
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+ ++.++..|-+..+ ++.+.+|++.-.+ -+.|=|-++...+.++++....+++|+..+-.=. .....
T Consensus 212 l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 282 (388)
T 3qld_A 212 LDAY-----DLQFIEQPLPEDD----WFDLAKLQASLRTPVCLDESVRSVRELKLTARLGAARVLNVKPGRLGGFGATLR 282 (388)
T ss_dssp GGGG-----CCSCEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HhhC-----CCcEEECCCCccc----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEECchhhCCHHHHHH
Confidence 4444 4556677754333 5566677665333 3566677899999999988888999998664211 11346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 283 ia~~A~~~gi~~~ 295 (388)
T 3qld_A 283 ALDVAGEAGMAAW 295 (388)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCeEE
Confidence 9999999999985
No 111
>3r0u_A Enzyme of enolase superfamily; structural genomics, putative epimerase, PSI-biolog YORK structural genomics research consortium; HET: MSE TAR; 1.90A {Francisella philomiragia subsp} PDB: 3px5_A* 3r0k_A* 3r10_A 3r11_A 3r1z_A*
Probab=76.22 E-value=32 Score=28.51 Aligned_cols=151 Identities=11% Similarity=0.046 Sum_probs=88.3
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+.++.+++.|++.|-.--.... ..+...=+++++.-.+++-+...... .++.+...+ +-+.|
T Consensus 142 ~~e~~~~~a~~~~~~Gf~~~KlK~g~~~-~~d~~~v~avR~a~g~~~~L~vDaN~----------~w~~~~A~~-~~~~l 209 (379)
T 3r0u_A 142 NVAETIQNIQNGVEANFTAIKVKTGADF-NRDIQLLKALDNEFSKNIKFRFDANQ----------GWNLAQTKQ-FIEEI 209 (379)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECSSCH-HHHHHHHHHHHHHCCTTSEEEEECTT----------CCCHHHHHH-HHHHH
T ss_pred CHHHHHHHHHHHHHcCCCEEeeecCCCH-HHHHHHHHHHHHhcCCCCeEEEeCCC----------CcCHHHHHH-HHHHH
Confidence 5677778888889999998764322211 12222334555422233333333321 124433322 22233
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+..+ .++.++..|-+.. .++.+.++++.-.+ -+.|=|-++..++.++++....+++|+...-.-. .....+
T Consensus 210 ~~~~---~~l~~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGi~~~~~i 282 (379)
T 3r0u_A 210 NKYS---LNVEIIEQPVKYY----DIKAMAEITKFSNIPVVADESVFDAKDAERVIDEQACNMINIKLAKTGGILEAQKI 282 (379)
T ss_dssp HTSC---CCEEEEECCSCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHTTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcC---CCcEEEECCCCcc----cHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHH
Confidence 3311 4567777775433 25667777765333 3556667899999999998888999987764221 112468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 283 a~~A~~~gi~~~ 294 (379)
T 3r0u_A 283 KKLADSAGISCM 294 (379)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCEEE
Confidence 999999999875
No 112
>3r4e_A Mandelate racemase/muconate lactonizing enzyme; enolase fold, mannonate dehydratase, D-mannonate, lyase; HET: CS2; 1.65A {Novosphingobium aromaticivorans} PDB: 2qjj_A 2qjn_A* 2qjm_A*
Probab=76.06 E-value=34 Score=28.78 Aligned_cols=150 Identities=9% Similarity=0.016 Sum_probs=87.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-------CcCC---------------C----------cHHHHHHHHHhcCCCCcEE
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD-------KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-------~Yg~---------------g----------~~E~~lG~~l~~~~r~~~~ 87 (211)
++++..+.++.+++.|++.|-.-- .||. + .....+=+++++.-.+++-
T Consensus 143 ~~e~~~~~a~~~~~~Gf~~~K~k~G~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~~~~~~~~~d~~~v~avR~a~G~d~~ 222 (418)
T 3r4e_A 143 DIAETVEAVGHYIDMGYKAIRAQTGVPGIKDAYGVGRGKLYYEPADASLPSVTGWDTRKALNYVPKLFEELRKTYGFDHH 222 (418)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTC------------------CCCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEecCCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCe
Confidence 578888889999999999876321 1221 0 0011122344432123444
Q ss_pred EEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCC
Q 028240 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEAS 166 (211)
Q Consensus 88 i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~ 166 (211)
|...... .++.+...+ +-+.|+.+++++| ..|-+.. .++.+.+++++-.+. ..|=+-++
T Consensus 223 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 282 (418)
T 3r4e_A 223 LLHDGHH----------RYTPQEAAN-LGKMLEPYQLFWL-----EDCTPAE----NQEAFRLVRQHTVTPLAVGEIFNT 282 (418)
T ss_dssp EEEECTT----------CSCHHHHHH-HHHHHGGGCCSEE-----ESCSCCS----SGGGGHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhhCCCEE-----ECCCCcc----CHHHHHHHHhcCCCCEEEcCCcCC
Confidence 4444321 124444433 3345666776554 4554322 355677777765554 33444578
Q ss_pred HHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
...++++++....+++|+..+-.-. .....+...|+++|+.+.
T Consensus 283 ~~~~~~~l~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~ 326 (418)
T 3r4e_A 283 IWDAKDLIQNQLIDYIRATVVGAGGLTHLRRIADLASLYQVRTG 326 (418)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCCCeEecCccccCCHHHHHHHHHHHHHcCCEEe
Confidence 8899999998889999998775321 123468999999999874
No 113
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=75.97 E-value=27 Score=27.48 Aligned_cols=98 Identities=11% Similarity=0.025 Sum_probs=58.0
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc--CCceEEec
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV--HPITAVQL 184 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q~ 184 (211)
+.+.+.+..++.. .-|.+.||+-. .+ ...+.++-++.+....++-.=--|.+-+++++.++++++. +.. +-+
T Consensus 23 ~~~~a~~~a~~~v-~~GAdiIDIg~--g~-~~v~~~ee~~rvv~~i~~~~~~pisIDT~~~~v~~aAl~a~~Ga~--iIN 96 (262)
T 1f6y_A 23 DPAPVQEWARRQE-EGGARALDLNV--GP-AVQDKVSAMEWLVEVTQEVSNLTLCLDSTNIKAIEAGLKKCKNRA--MIN 96 (262)
T ss_dssp CHHHHHHHHHHHH-HHTCSEEEEBC--C-----CHHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHCSSCE--EEE
T ss_pred CHHHHHHHHHHHH-HCCCcEEEECC--CC-CCCChHHHHHHHHHHHHHhCCCeEEEeCCCHHHHHHHHhhCCCCC--EEE
Confidence 4555555555554 57899999975 11 1233344444444444431112578889999999999987 332 223
Q ss_pred cCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 185 EWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 185 ~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
..|.. ...-+++++.++++|..|+.+
T Consensus 97 dvs~~-~d~~~~~~~~~a~~~~~vvlm 122 (262)
T 1f6y_A 97 STNAE-REKVEKLFPLAVEHGAALIGL 122 (262)
T ss_dssp EECSC-HHHHHHHHHHHHHTTCEEEEE
T ss_pred ECCCC-cccHHHHHHHHHHhCCcEEEE
Confidence 33433 111137899999999998764
No 114
>4e8g_A Enolase, mandelate racemase/muconate lactonizing enzyme, N domain protein; putative racemase, nysgrc, structural genomics, PSI-biology; 2.00A {Paracoccus denitrificans}
Probab=75.89 E-value=24 Score=29.42 Aligned_cols=147 Identities=12% Similarity=0.055 Sum_probs=87.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
++++..+.++.+++.|++.|-.--.-.+-..+...=+++++ ...+++-|....... ++.+. ..+.
T Consensus 164 ~~e~~~~~a~~~~~~G~~~~KlKvg~~~~~~d~~~v~avR~a~gg~~~~L~vDaN~~----------w~~~~----A~~~ 229 (391)
T 4e8g_A 164 QPDEIARIAAEKVAEGFPRLQIKIGGRPVEIDIETVRKVWERIRGTGTRLAVDGNRS----------LPSRD----ALRL 229 (391)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEECCSSCHHHHHHHHHHHHHHHTTTTCEEEEECTTC----------CCHHH----HHHH
T ss_pred CHHHHHHHHHHHHHcCCcEEEEcCCCCCHHHHHHHHHHHHHHhCCCCCeEEEeCCCC----------CCHHH----HHHH
Confidence 57888888888999999997643211010012222234433 221444444443221 24332 2333
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
+++|. + .++ ++..|-+ .++.+.++++.-.+. +.|=|-++...+.++++....+++|+..+-.=- ..-..
T Consensus 230 ~~~L~-~-~~i-~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~~~~~a~d~v~ik~~~~GGit~~~~ 300 (391)
T 4e8g_A 230 SRECP-E-IPF-VLEQPCN------TLEEIAAIRGRVQHGIYLDESGEDLSTVIRAAGQGLCDGFGMKLTRIGGLQQMAA 300 (391)
T ss_dssp HHHCT-T-SCE-EEESCSS------SHHHHHHHGGGCCSCEEESTTCCSHHHHHHHHHTTCCSEEEEEHHHHTSHHHHHH
T ss_pred HHHHh-h-cCe-EEecCCc------cHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCEEEeCccccCCHHHHHH
Confidence 44454 2 366 6777721 367777787764443 556666899999999988888999997764211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 301 ia~~A~~~gi~~~ 313 (391)
T 4e8g_A 301 FRDICEARALPHS 313 (391)
T ss_dssp HHHHHHHTTCCEE
T ss_pred HHHHHHHcCCeEE
Confidence 8999999999875
No 115
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=75.39 E-value=32 Score=28.12 Aligned_cols=133 Identities=14% Similarity=0.132 Sum_probs=73.1
Q ss_pred HHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHH---HHhcCCCCcEEEEeccccccCCCc
Q 028240 46 SIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGK---ALKELPRENIQVATKFGFVELGFT 100 (211)
Q Consensus 46 ~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~---~l~~~~r~~~~i~tK~~~~~~~~~ 100 (211)
+..+.|.++|+..++- | +.||. .-|. ++-+ ++++.-.+++.|..|+.+....++
T Consensus 156 ~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVR~avG~d~pV~vRls~~~~~~~ 234 (349)
T 3hgj_A 156 EGARRALRAGFQVIELHMAHGYLLSSFLSPLSNQRTDAYGG-SLENRMRFPLQVAQAVREVVPRELPLFVRVSATDWGEG 234 (349)
T ss_dssp HHHHHHHHTTCCEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHSCTTSCEEEEEESCCCSTT
T ss_pred HHHHHHHHcCCCEEEECCccchHHHHhcCCcccccCCCCCc-CHHHHHHHHHHHHHHHHHHhcCCceEEEEeccccccCC
Confidence 3344567899998773 2 24552 2332 2222 233222345667778876433221
Q ss_pred ccccCCChHHHHHHHHHHHhhcCCCceeEEE-eecCCCC--CCHHHHHHHHHHHHHcCcccEEEeCC-CCHHHHHHHhcc
Q 028240 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYY-QHRVDTS--VPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAV 176 (211)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~-lh~~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~ 176 (211)
..+.+.. ..+-+.|+..|+|||++-. -..+... ......++.+.++++.-.+--+++.. ++++..+++++.
T Consensus 235 ----g~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~Ggi~t~e~a~~~l~~ 309 (349)
T 3hgj_A 235 ----GWSLEDT-LAFARRLKELGVDLLDCSSGGVVLRVRIPLAPGFQVPFADAVRKRVGLRTGAVGLITTPEQAETLLQA 309 (349)
T ss_dssp ----SCCHHHH-HHHHHHHHHTTCCEEEEECCCSCSSSCCCCCTTTTHHHHHHHHHHHCCEEEECSSCCCHHHHHHHHHT
T ss_pred ----CCCHHHH-HHHHHHHHHcCCCEEEEecCCcCcccccCCCccccHHHHHHHHHHcCceEEEECCCCCHHHHHHHHHC
Confidence 2244443 3455667788988877642 0111110 01112345566666654566677766 479999999988
Q ss_pred CCceEEec
Q 028240 177 HPITAVQL 184 (211)
Q Consensus 177 ~~~~~~q~ 184 (211)
...+.+++
T Consensus 310 G~aD~V~i 317 (349)
T 3hgj_A 310 GSADLVLL 317 (349)
T ss_dssp TSCSEEEE
T ss_pred CCceEEEe
Confidence 77777765
No 116
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=75.30 E-value=29 Score=30.92 Aligned_cols=135 Identities=10% Similarity=0.064 Sum_probs=73.5
Q ss_pred HHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHHHHhc---CCCCcEEEEeccccccC
Q 028240 43 DGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGKALKE---LPRENIQVATKFGFVEL 97 (211)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~~l~~---~~r~~~~i~tK~~~~~~ 97 (211)
+..+..+.|.++|+..+|. + +.||. .-|. ++-+.++. .-.+++.|..|+.+...
T Consensus 142 ~~~~aA~~a~~aGfd~veih~~~gyl~~qFlsp~~n~r~d~yGg-s~~~r~r~~~eiv~avr~~vG~~~~v~vrls~~~~ 220 (671)
T 1ps9_A 142 NFARCAQLAREAGYDGVEVMGSEGYLINEFLTLRTNQRSDQWGG-DYRNRMRFAVEVVRAVRERVGNDFIIIYRLSMLDL 220 (671)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECBTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCSSSEEEEEEEEECC
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhCCCccCCCcCcCCC-cHHHHHHHHHHHHHHHHHHcCCCceEEEEECcccc
Confidence 3445556677899998875 2 23442 2232 22333322 12356788888876432
Q ss_pred CCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCC-------CCHHHHHHHHHHHHHcCcccEEEeCCC-CHHH
Q 028240 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-------VPIEETIGEMKKLVEEGKIKYIGLSEA-SPDT 169 (211)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-------~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~ 169 (211)
..+ ..+.+... .+-+.|+..|++|+++-. .+.+.. .+....++.+.++++.=.+--+++... +++.
T Consensus 221 ~~~----g~~~~~~~-~~a~~l~~~g~d~i~v~~-~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~iPvi~~Ggi~~~~~ 294 (671)
T 1ps9_A 221 VED----GGTFAETV-ELAQAIEAAGATIINTGI-GWHEARIPTIATPVPRGAFSWVTRKLKGHVSLPLVTTNRINDPQV 294 (671)
T ss_dssp STT----CCCHHHHH-HHHHHHHHHTCSEEEEEE-CBTTCSSCSSSTTSCTTTTHHHHHHHTTSCSSCEEECSSCCSHHH
T ss_pred CCC----CCCHHHHH-HHHHHHHhcCCCEEEcCC-CccccccccccccCCcchHHHHHHHHHHhcCceEEEeCCCCCHHH
Confidence 111 12444433 344667788988887632 111110 111123556666776656677777775 7888
Q ss_pred HHHHhccCCceEEec
Q 028240 170 IRRAHAVHPITAVQL 184 (211)
Q Consensus 170 l~~~~~~~~~~~~q~ 184 (211)
.+++++....+.+++
T Consensus 295 a~~~l~~g~aD~V~~ 309 (671)
T 1ps9_A 295 ADDILSRGDADMVSM 309 (671)
T ss_dssp HHHHHHTTSCSEEEE
T ss_pred HHHHHHcCCCCEEEe
Confidence 888877655555543
No 117
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=75.24 E-value=21 Score=28.25 Aligned_cols=97 Identities=14% Similarity=0.107 Sum_probs=62.4
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhcc--CCceEEe
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAV--HPITAVQ 183 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~--~~~~~~q 183 (211)
+.+.+.+..++.. .-|.+.||+-.--. .....+.+...++.+++. +. -|.+-+++++.++++++. +..-++
T Consensus 32 ~~~~a~~~a~~~v-~~GAdiIDIg~~s~--~~eE~~rv~~vi~~l~~~~~~--pisIDT~~~~v~~aal~a~~Ga~iIN- 105 (271)
T 2yci_X 32 DPRPIQEWARRQA-EKGAHYLDVNTGPT--ADDPVRVMEWLVKTIQEVVDL--PCCLDSTNPDAIEAGLKVHRGHAMIN- 105 (271)
T ss_dssp CCHHHHHHHHHHH-HTTCSEEEEECCSC--SSCHHHHHHHHHHHHHHHCCC--CEEEECSCHHHHHHHHHHCCSCCEEE-
T ss_pred CHHHHHHHHHHHH-HCCCCEEEEcCCcC--chhHHHHHHHHHHHHHHhCCC--eEEEeCCCHHHHHHHHHhCCCCCEEE-
Confidence 4455655555554 57899999866432 223455666666666665 33 478888999999999987 443222
Q ss_pred ccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 184 LEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 184 ~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
..|... ..-+++++.|+++|..|+.+
T Consensus 106 -dvs~~~-d~~~~~~~~~a~~~~~vv~m 131 (271)
T 2yci_X 106 -STSADQ-WKMDIFFPMAKKYEAAIIGL 131 (271)
T ss_dssp -EECSCH-HHHHHHHHHHHHHTCEEEEE
T ss_pred -ECCCCc-cccHHHHHHHHHcCCCEEEE
Confidence 233322 10157899999999998864
No 118
>3qtp_A Enolase 1; glycolysis, lyase; HET: 2PG; 1.90A {Entamoeba histolytica}
Probab=75.00 E-value=36 Score=29.03 Aligned_cols=95 Identities=9% Similarity=0.023 Sum_probs=66.0
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEE--eCCCCHHHHHHHhccCCceEE
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIG--LSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iG--vs~~~~~~l~~~~~~~~~~~~ 182 (211)
.+++.+.+-..+.++..+ ++++..|-+..+ |+.+.+|.++ |+|.-+| +...+++.+.++++....+++
T Consensus 279 ~t~~elid~y~~lle~yp-----I~~IEDPl~~dD----~eg~a~Lt~~lg~i~IvGDEl~vTn~~~i~~~Ie~~a~n~I 349 (441)
T 3qtp_A 279 KDVDGLIAEYVDYGKHYP-----IASIEDPFAEDD----WAAWNKFTVEHGNFQIVGDDLLVTNPARVQMAMDKNACNSV 349 (441)
T ss_dssp ECHHHHHHHHHHHHHHSC-----EEEEESCSCTTC----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEE
T ss_pred cCHHHHHHHHHHHhhhcc-----eeeecCCCChHH----HHHHHHHHHhcCCceEEeccccccCHHHHHHHHHcCCCCEE
Confidence 467777777777777654 788888865544 5555555554 3566566 334579999999988888889
Q ss_pred eccCCccccC-chhhHHHHHHHcCCeee
Q 028240 183 QLEWSLWARD-IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 183 q~~~~~~~~~-~~~~~~~~~~~~gi~v~ 209 (211)
|+..|=.-.- ...++...|+++|+.++
T Consensus 350 lIKvnqiGGITEalkaa~lA~~~G~~vm 377 (441)
T 3qtp_A 350 LIKVNQIGTLTETFKTIKMAQEKGWGVM 377 (441)
T ss_dssp EECGGGTCCHHHHHHHHHHHHHTTCEEE
T ss_pred EecccccccHHHHHHHHHHHHHcCCeEE
Confidence 8887742211 23468899999999975
No 119
>3t6c_A RSPA, putative MAND family dehydratase; enolase, mannonate dehydratase related protein, enzyme funct intitiative, lyase, hydro-lyases; HET: GCO; 1.60A {Pantoea ananatis} PDB: 3tw9_A 3twa_A 3twb_A*
Probab=74.93 E-value=38 Score=28.73 Aligned_cols=84 Identities=10% Similarity=0.039 Sum_probs=56.5
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.|+.+++.+| ..|-+. +.++.+.+++++-.+. +.|=+-++...++++++....+++|+..+-.-. ...
T Consensus 261 ~~L~~~~i~~i-----EeP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~k~~~~GGit~~ 331 (440)
T 3t6c_A 261 KALEPYQLFFL-----EDPVAP----ENTEWLKMLRQQSSTPIAMGELFVNVNEWKPLIDNKLIDYIRCHISSIGGITPA 331 (440)
T ss_dssp HHTGGGCCSEE-----ECSSCG----GGGGGHHHHHHHCCSCEEECTTCCSHHHHHHHHHTTCCSEECCCGGGGTSHHHH
T ss_pred HHhhhcCCCEE-----ECCCCh----hhHHHHHHHHhhcCCCEEeCcccCCHHHHHHHHHcCCccceeechhhhCCHHHH
Confidence 35566665544 455332 2456677777764443 445566889999999998889999998775321 113
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 332 ~~ia~~A~~~gi~~~ 346 (440)
T 3t6c_A 332 KKIAIYSELNGVRTA 346 (440)
T ss_dssp HHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHcCCEEE
Confidence 468999999999874
No 120
>4hnl_A Mandelate racemase/muconate lactonizing enzyme; dehydratase, magnesium binding, enzyme function initiative,; 1.48A {Enterococcus gallinarum EG2} PDB: 3s47_A
Probab=73.77 E-value=22 Score=29.94 Aligned_cols=150 Identities=11% Similarity=0.110 Sum_probs=86.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCc-CC----------------CcHHHHH------HHHHhcCCCCcEEEEecccccc
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKY-GP----------------YTNEILL------GKALKELPRENIQVATKFGFVE 96 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Y-g~----------------g~~E~~l------G~~l~~~~r~~~~i~tK~~~~~ 96 (211)
+.++..+.++.+++.|++.+=.--.. +. ......+ =+++++.-.+++.|..-...
T Consensus 153 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~v~avR~a~G~~~~l~vDan~-- 230 (421)
T 4hnl_A 153 NLDDLYHEIDRFLAAGYRYIRCQLGFYGGNPSQLQTPEEPISGSYFDQTDYMETTLKMFAAIKEKYGNQFQMLHDVHE-- 230 (421)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCCCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHhhHHHHhhccccccCCchhccccccccccccccchhHHHHHHHHHHHHHHHhCCCceEeccccc--
Confidence 56788888899999999987532111 00 0011111 12233211234444433322
Q ss_pred CCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhc
Q 028240 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (211)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (211)
.++.+...+-+ +.|+.+ +++++..|-+. +-++.+.+|+++-.+. +.|=+-++...+.++++
T Consensus 231 --------~~~~~~A~~~~-~~l~~~-----~i~~iEeP~~~----~d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~ 292 (421)
T 4hnl_A 231 --------RLHPNQAIQFA-KAAEPY-----QLFFLEDILPP----DQSHWLTQLRSQSATPIATGELFNNPMEWQELVK 292 (421)
T ss_dssp --------CSCHHHHHHHH-HHHGGG-----CCSEEECCSCG----GGGGGHHHHHTTCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------cCCHHHHHHHH-HHhhhh-----hhcccccCCcc----cchHHHHHHHhcCCCCeecCcceehhHHHHHHHh
Confidence 12444433322 334444 44556666432 3466777777664443 55666688899999999
Q ss_pred cCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 176 VHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 176 ~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
....+++|+..+-.=. .....+...|+++|+.|.
T Consensus 293 ~~a~d~v~~d~~~~GGite~~~ia~~A~~~gi~v~ 327 (421)
T 4hnl_A 293 NRQIDFMRAHVSQIGGITPALKLAHFCDAMGVRIA 327 (421)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEEC
T ss_pred cCCceEEEeCCCCCCCHHHHHHHHHHHHHCCCeEE
Confidence 8889999998775321 123468999999999874
No 121
>3vdg_A Probable glucarate dehydratase; enolase, magnesium binding site, lyase; 1.90A {Mycobacterium smegmatis str} PDB: 3vfc_A*
Probab=73.45 E-value=30 Score=29.46 Aligned_cols=146 Identities=13% Similarity=0.203 Sum_probs=85.0
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
.++++..+..+.+++. |++.|=.--...+-..+...=+++++ .+.-++.|-..-+ ++.+.. .
T Consensus 192 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~d~~L~vDaN~~------------w~~~~A----i 255 (445)
T 3vdg_A 192 LDPDGIVAQARRMIDEYGFSAIKLKGGVFAPEEEMAAVEALRAAFPDHPLRLDPNAA------------WTPQTS----V 255 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHCTTSCEEEECTTC------------SCHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEECCCCCCHHHHHHHHHHHHHhCCCCcEEEECCCC------------CCHHHH----H
Confidence 4678888888888874 99986432111110111122244444 3222333332222 233332 2
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.++.|. ++ +.++..|-+ -++.+.++++.-.+ -+.|=|-++..++.++++....+++|+..+-.-- ..-
T Consensus 256 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~~GGitea 326 (445)
T 3vdg_A 256 KVAAGLE-GV--LEYLEDPTP------GLDGMAEVAAQAPMPLATNMCVVAFDQLPAAVAKNSVQVVLSDHHYWGGLQRS 326 (445)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHHHCSSCEEESSSCCSGGGHHHHHHHTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hH--HHeeeCCCC------CHHHHHHHHhcCCCCEEcCCcCCCHHHHHHHHHcCCCCEEeeCcceeCCHHHH
Confidence 3344554 33 667777742 25667777765333 3556667888999999988888999987654221 112
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 327 ~kia~lA~~~gv~v~ 341 (445)
T 3vdg_A 327 RLLAGICDTFGLGLS 341 (445)
T ss_dssp HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 468999999999875
No 122
>1v5x_A PRA isomerase, phosphoribosylanthranilate isomerase; alpha-beta barrel, TRPF, riken structural genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.1.2.4
Probab=73.07 E-value=10 Score=28.68 Aligned_cols=65 Identities=11% Similarity=0.129 Sum_probs=42.7
Q ss_pred hhcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCceEEeccCC
Q 028240 120 RRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEWS 187 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~ 187 (211)
..+|.||+=+.+. -+.+ ..+.+.+- .+.+.. ...+..+||. |.+++.+.+..+...++++|++-+
T Consensus 18 ~~~GaD~iGfif~-~~SpR~V~~~~a~-~i~~~~-~~~~~~VgVfvn~~~~~i~~~~~~~~ld~vQLHG~ 84 (203)
T 1v5x_A 18 EALGAFALGFVLA-PGSRRRIAPEAAR-AIGEAL-GPFVVRVGVFRDQPPEEVLRLMEEARLQVAQLHGE 84 (203)
T ss_dssp HHHTCSEEEEECC-TTCTTBCCHHHHH-HHHHHS-CSSSEEEEEESSCCHHHHHHHHHHTTCSEEEECSC
T ss_pred HHcCCCEEEEEec-CCCCCcCCHHHHH-HHHHhC-CCCCCEEEEEeCCCHHHHHHHHHhhCCCEEEECCC
Confidence 4679999988853 2222 23443332 222221 2458899987 468889999998899999999743
No 123
>3va8_A Probable dehydratase; enolase, magnesium binding site, lyase; 2.00A {Gibberella zeae}
Probab=73.02 E-value=31 Score=29.40 Aligned_cols=146 Identities=14% Similarity=0.224 Sum_probs=85.7
Q ss_pred CCHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
.++++..+..+.+++. |++.|=.--...+-..+...=+++++ .+.-++.|-...++ +.+...
T Consensus 190 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~~~~~L~vDaN~~w------------~~~~Ai---- 253 (445)
T 3va8_A 190 LDPEGVVKQAKKIIDEYGFKAIKLKGGVFPPADEVAAIKALHKAFPGVPLRLDPNAAW------------TVETSK---- 253 (445)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCB------------CHHHHH----
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeeeCCCCC------------CHHHHH----
Confidence 4678888888888875 99986432111110111122234443 32223433332222 333322
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.+++|. ++ +.++..|- + .++.+.++++.-.+ -+.|=|-++...+.++++....+++|+..+-.-- ...
T Consensus 254 ~~~~~L~-~~--l~~iEeP~---~---d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~~~GGitea 324 (445)
T 3va8_A 254 WVAKELE-GI--VEYLEDPA---G---EIEGMAAVAKEASMPLATNMAVVAFDHLPPSILQDAVQVILSDHHFWGGLRKS 324 (445)
T ss_dssp HHHHHTT-TT--CSEEESCB---S---HHHHHHHHHTTCSSCEEESSSCCSGGGHHHHHHTTCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHh-hh--cCeEeecC---c---CHHHHHHHHHcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecchhcCCHHHH
Confidence 3344554 33 66677773 2 47778888776433 3566667888999999988889999997654211 113
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 325 ~kia~lA~~~gv~v~ 339 (445)
T 3va8_A 325 QTLASICATWGLRLS 339 (445)
T ss_dssp HHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 469999999999875
No 124
>3mzn_A Glucarate dehydratase; lyase, structural genomics, protein structure initiative, PS nysgrc; 1.85A {Chromohalobacter salexigens} PDB: 3nfu_A
Probab=72.19 E-value=21 Score=30.43 Aligned_cols=153 Identities=12% Similarity=0.051 Sum_probs=82.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
.++++..+..+.+++ .|++.|=.--...+...+...=+++++.- .++-|..-... .++.+. ..+
T Consensus 181 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~-pd~~L~vDaN~----------~w~~~~----A~~ 245 (450)
T 3mzn_A 181 MTPEAVANLARAAYDRYGFKDFKLKGGVLRGEEEADCIRALHEAF-PEARLALDPNG----------AWKLDE----AVR 245 (450)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------CBCHHH----HHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEECCCCCCHHHHHHHHHHHHHhC-CCCeEEEECCC----------CCCHHH----HHH
Confidence 367888888888887 69998643211111112222224444421 23333322211 113332 223
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCchhh
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 196 (211)
.++.|. ++ +.++..|-+..+.-.-++.+.++++. +.=-+.|-+.++...+.++++....+++|......--..-..
T Consensus 246 ~~~~L~-~~--i~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~k 322 (450)
T 3mzn_A 246 VLEPIK-HL--LSYAEDPCGQEGGFSGRETMAEFKKRTGLPTATNMIATDYKQLQYAVQLNSVDIPLADCHFWTMQGAVA 322 (450)
T ss_dssp HHGGGG-GG--CSEEESSBCCBTTBCHHHHHHHHHHHHCCCEEESSSSSSHHHHHHHHHHTCCSEEBCCHHHHCHHHHHH
T ss_pred HHHHhh-hc--cceeeCCCCcccccchHHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCccCCHHHHHH
Confidence 445554 33 55677775433311124556666654 333355666778888999888888888887642111011256
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 323 ia~lA~a~gv~~~ 335 (450)
T 3mzn_A 323 VGELCNEWGMTWG 335 (450)
T ss_dssp HHHHHHHTTCCCB
T ss_pred HHHHHHHcCCEEE
Confidence 8999999999864
No 125
>4g8t_A Glucarate dehydratase; enolase, enzyme function INI EFI, structural genomics, lyase; 1.70A {Actinobacillus succinogenes} PDB: 1ec7_A 1ec8_A* 1ec9_A* 1ecq_A* 1jdf_A* 3pwi_A* 1jct_A* 3pwg_A* 1bqg_A
Probab=72.19 E-value=16 Score=31.30 Aligned_cols=87 Identities=8% Similarity=0.014 Sum_probs=57.8
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--h
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--E 194 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~ 194 (211)
..+.|. ++ +.++..|-+..+.....+.+.++++. +.=-+.|=+.++...+.++++....+++|..... -+. -
T Consensus 266 ~~~~le-~~--l~wiEeP~~~~d~~~~~e~~a~lr~~~~iPIa~gE~~~~~~~~~~~i~~~avdi~~~d~~~--GGit~~ 340 (464)
T 4g8t_A 266 IGKQLK-GV--LAYAEDPCGAEQGYSGREIMAEFRRATGLPTATNMIATDWRQMGHTISLQSVDIPLADPHF--WTMQGS 340 (464)
T ss_dssp HHHHTT-TT--CSCEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHHTCCSEEBCCHHH--HCHHHH
T ss_pred HHHHhh-hc--cceeecCcCcccccchHHHHHhhhccCCCCccccccccchhhHHHHHHhhCCCEEeccccc--cchHHH
Confidence 444553 33 44566664443333445666677655 3334778888999999999998888889887432 222 3
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+.+|+.+.
T Consensus 341 ~kia~lA~~~gi~v~ 355 (464)
T 4g8t_A 341 IRVAQMCHEWGLTWG 355 (464)
T ss_dssp HHHHHHHHHHTCCCB
T ss_pred HHHHHHHHHcCCEEE
Confidence 468999999999874
No 126
>3pfr_A Mandelate racemase/muconate lactonizing protein; emolase superfamily fold, D-glucarate dehydratase, D-glucara isomerase; HET: GKR; 1.90A {Actinobacillus succinogenes} PDB: 3n6j_A 3n6h_A* 4gyp_C*
Probab=71.78 E-value=25 Score=30.05 Aligned_cols=152 Identities=13% Similarity=0.063 Sum_probs=83.0
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
.++++..+..+.+++ .|++.|=.--...+...+...=+++++ .+.-++.|-...+ ++.+ ...
T Consensus 184 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~~v~avRea~pd~~L~vDaN~~------------w~~~----~A~ 247 (455)
T 3pfr_A 184 MDTQAVIELAAASKDRYGFKDFKLKGGVFEGSKEIDTVIELKKHFPDARITLDPNGC------------WSLD----EAI 247 (455)
T ss_dssp CSHHHHHHHHHHHHHHHCCSCEEEECSSSCHHHHHHHHHHHHHHCTTCCEEEECTTB------------SCHH----HHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEcCCCCCHHHHHHHHHHHHHhCCCCeEeecCCCC------------CCHH----HHH
Confidence 367888888888886 699976432111111112222234443 3322333332222 1332 223
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCchh
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIEN 195 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~ 195 (211)
+.++.|. ++ +.++..|-+..+.-..++.+.+|++. +.=-+.|-+.++...+.++++....+++|......--..-.
T Consensus 248 ~~~~~L~-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~di~~~d~~~GGit~a~ 324 (455)
T 3pfr_A 248 QLCKGLN-DV--LTYAEDPCIGENGYSGREIMAEFRRRTGIPTATNMIATNWREMCHAIMLQSVDIPLADPHFWTLTGAS 324 (455)
T ss_dssp HHHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSCCSHHHHHHHHHHTCCSEEBCCHHHHCHHHHH
T ss_pred HHHHhhc-cc--ceeeecCCChhhccchHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecCCcCCHHHHH
Confidence 3455554 33 56677774433211125566666654 33335666677888899988888888888764211101135
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.+.
T Consensus 325 kia~lA~a~gv~~~ 338 (455)
T 3pfr_A 325 RVAQLCNEWGLTWG 338 (455)
T ss_dssp HHHHHHHHTTCCCB
T ss_pred HHHHHHHHcCCEEE
Confidence 68999999999864
No 127
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=71.21 E-value=43 Score=27.75 Aligned_cols=135 Identities=18% Similarity=0.129 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHH---HHhc-CCCCcEEEEeccccc
Q 028240 42 EDGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGK---ALKE-LPRENIQVATKFGFV 95 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~---~l~~-~~r~~~~i~tK~~~~ 95 (211)
++..+..+.|.++|+..+|. + +.||. .-|. ++-+ ++++ +.. + .|..|+...
T Consensus 166 ~~f~~aA~~a~~aGfDgVEIh~a~GYLl~QFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~avg~-~-~v~vrls~~ 242 (377)
T 2r14_A 166 EDYRQAAQRAKRAGFDMVEVHAANACLPNQFLATGTNRRTDQYGG-SIENRARFPLEVVDAVAEVFGP-E-RVGIRLTPF 242 (377)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEECTTCHHHHHHSTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCG-G-GEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCcccchHHhccCCccccCCCccCc-chhhchHHHHHHHHHHHHHcCC-C-cEEEEeccc
Confidence 34445556668899998884 2 34553 2222 2222 2222 222 3 567777643
Q ss_pred cCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHH-HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHh
Q 028240 96 ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE-ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (211)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~-~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (211)
.... +.. ......-...+-+.|+..|+++|++ |......... ..++.+.++++.=.+--|++..++++..++++
T Consensus 243 ~~~~-~~~-~~~~~~~~~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~ik~~~~iPvi~~Ggi~~~~a~~~l 317 (377)
T 2r14_A 243 LELF-GLT-DDEPEAMAFYLAGELDRRGLAYLHF---NEPDWIGGDITYPEGFREQMRQRFKGGLIYCGNYDAGRAQARL 317 (377)
T ss_dssp CCCT-TCC-CSCHHHHHHHHHHHHHHTTCSEEEE---ECCC------CCCTTHHHHHHHHCCSEEEEESSCCHHHHHHHH
T ss_pred cccC-CCC-CCCCHHHHHHHHHHHHHcCCCEEEE---eCCcccCCCCcchHHHHHHHHHHCCCCEEEECCCCHHHHHHHH
Confidence 2110 000 1112222345566778889888776 4321100000 12455666776656778888888899999998
Q ss_pred ccCCceEEec
Q 028240 175 AVHPITAVQL 184 (211)
Q Consensus 175 ~~~~~~~~q~ 184 (211)
+....+.+++
T Consensus 318 ~~g~aD~V~i 327 (377)
T 2r14_A 318 DDNTADAVAF 327 (377)
T ss_dssp HTTSCSEEEE
T ss_pred HCCCceEEee
Confidence 8776666655
No 128
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=71.19 E-value=35 Score=27.17 Aligned_cols=96 Identities=15% Similarity=0.130 Sum_probs=59.6
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEee-cCCC-CCCHH----HHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCce
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQH-RVDT-SVPIE----ETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~-~~~~~----~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (211)
.+.+.+..++. -.-|.+.||+---- +|.. ..+.+ .+...++.+++. +. -|.+-+++++.++++++.+..-
T Consensus 37 ~~~a~~~a~~~-v~~GAdiIDIGgestrPga~~v~~~eE~~rv~pvi~~l~~~~~~--piSIDT~~~~va~aAl~aGa~i 113 (282)
T 1aj0_A 37 LIDAVKHANLM-INAGATIIDVGGESTRPGAAEVSVEEELQRVIPVVEAIAQRFEV--WISVDTSKPEVIRESAKVGAHI 113 (282)
T ss_dssp HHHHHHHHHHH-HHHTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHHHHCCC--EEEEECCCHHHHHHHHHTTCCE
T ss_pred HHHHHHHHHHH-HHCCCCEEEECCCcCCCCCCcCCHHHHHHHHHHHHHHHHhhcCC--eEEEeCCCHHHHHHHHHcCCCE
Confidence 44444444332 33488999997633 3432 12222 345555566554 33 5788899999999999886544
Q ss_pred EEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 181 AVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 181 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
++-+ +.. . .+++++.++++|..|+.+
T Consensus 114 INdv--sg~-~--d~~~~~~~a~~~~~vVlm 139 (282)
T 1aj0_A 114 INDI--RSL-S--EPGALEAAAETGLPVCLM 139 (282)
T ss_dssp EEET--TTT-C--STTHHHHHHHHTCCEEEE
T ss_pred EEEC--CCC-C--CHHHHHHHHHhCCeEEEE
Confidence 4433 332 1 347899999999998763
No 129
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=71.16 E-value=37 Score=26.99 Aligned_cols=98 Identities=14% Similarity=0.053 Sum_probs=62.2
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEee-cCC-----CCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCce
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RVD-----TSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (211)
+.+.+.+..++. -.-|.+.||+---- +|. ....++.+...++.+++.+. -|.+-+++++.++++++.+..-
T Consensus 27 ~~~~a~~~a~~~-v~~GAdiIDIGgestrpga~~v~~~eE~~Rv~pvi~~l~~~~~--piSIDT~~~~va~aAl~aGa~i 103 (280)
T 1eye_A 27 DLDDAVKHGLAM-AAAGAGIVDVGGESSRPGATRVDPAVETSRVIPVVKELAAQGI--TVSIDTMRADVARAALQNGAQM 103 (280)
T ss_dssp SHHHHHHHHHHH-HHTTCSEEEEECC--------------HHHHHHHHHHHHHTTC--CEEEECSCHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHH-HHCCCCEEEECCccCCCCCCCCCHHHHHHHHHHHHHHhhcCCC--EEEEeCCCHHHHHHHHHcCCCE
Confidence 455555554333 34588999998422 231 12335566777777777643 5788999999999999886533
Q ss_pred EEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 181 AVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 181 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+| ..|.... .+++++.++++|..|+.+
T Consensus 104 IN--dvsg~~~--d~~m~~~~a~~~~~vVlm 130 (280)
T 1eye_A 104 VN--DVSGGRA--DPAMGPLLAEADVPWVLM 130 (280)
T ss_dssp EE--ETTTTSS--CTTHHHHHHHHTCCEEEE
T ss_pred EE--ECCCCCC--CHHHHHHHHHhCCeEEEE
Confidence 33 3343332 347999999999998763
No 130
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=71.11 E-value=14 Score=29.73 Aligned_cols=96 Identities=11% Similarity=0.074 Sum_probs=58.0
Q ss_pred HHHHHHHHHHHhhcCCCceeEEEee-cCC-CCCCHHH----HHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceE
Q 028240 109 EYVRSCCEASLRRLDVEYIDLYYQH-RVD-TSVPIEE----TIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITA 181 (211)
Q Consensus 109 ~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~-~~~~~~~----~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~ 181 (211)
+.+.+..++.+ .-|.+.||+---- +|. ...+.++ +...++.+++. +. -|.+-+++++.++++++.+..-+
T Consensus 63 ~~a~~~a~~~v-~~GAdiIDIGgeStrPga~~v~~~eE~~RvvpvI~~l~~~~~v--piSIDT~~~~V~~aAl~aGa~iI 139 (297)
T 1tx2_A 63 DAAVRHAKEMR-DEGAHIIDIGGESTRPGFAKVSVEEEIKRVVPMIQAVSKEVKL--PISIDTYKAEVAKQAIEAGAHII 139 (297)
T ss_dssp HHHHHHHHHHH-HTTCSEEEEESCC----CCCCCHHHHHHHHHHHHHHHHHHSCS--CEEEECSCHHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHHH-HcCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhcCCc--eEEEeCCCHHHHHHHHHcCCCEE
Confidence 44444444333 5688999987532 232 1233333 34444555554 43 47888999999999998755333
Q ss_pred EeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 182 VQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 182 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+..|..+. .+++++.++++|..|+.+
T Consensus 140 --Ndvsg~~~--d~~m~~~aa~~g~~vVlm 165 (297)
T 1tx2_A 140 --NDIWGAKA--EPKIAEVAAHYDVPIILM 165 (297)
T ss_dssp --EETTTTSS--CTHHHHHHHHHTCCEEEE
T ss_pred --EECCCCCC--CHHHHHHHHHhCCcEEEE
Confidence 44444432 347899999999988763
No 131
>3p0w_A Mandelate racemase/muconate lactonizing protein; structural genomics, PSI-2, protein structure initiative; HET: GKR; 1.71A {Ralstonia pickettii} PDB: 4hn8_A 3nxl_A
Probab=70.76 E-value=26 Score=30.11 Aligned_cols=151 Identities=11% Similarity=0.004 Sum_probs=83.6
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
.++++..+..+.+++ .|++.|=.--...+...+...=+++++.- .++-|..-... .++.+ ...+
T Consensus 199 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~-pd~~L~vDaN~----------~w~~~----~Ai~ 263 (470)
T 3p0w_A 199 MTPAAIARLAEAATERYGFADFKLKGGVMPGAEEMEAIAAIKARF-PHARVTLDPNG----------AWSLN----EAIA 263 (470)
T ss_dssp CSHHHHHHHHHHHHHHHCCSEEEEECSSSCHHHHHHHHHHHHHHC-TTSEEEEECTT----------BBCHH----HHHH
T ss_pred CCHHHHHHHHHHHHHhCCCCEEEEeCCCCCHHHHHHHHHHHHHhC-CCCeEEeeCCC----------CCCHH----HHHH
Confidence 467888888888887 69998643211111112222223444321 23333322211 11332 2334
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--h
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--E 194 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~ 194 (211)
.++.|. ++ +.++..|-+..+.-..++.+.++++. +.=-+.|=+.++...+.++++...++++|..... -+. -
T Consensus 264 ~~~~Le-~~--l~~iEeP~~~~d~~~~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~div~~d~~~--GGit~a 338 (470)
T 3p0w_A 264 LCKGQG-HL--VAYAEDPCGPEAGYSGREVMAEFKRATGIPTATNMIATDWRQMGHAVQLHAVDIPLADPHF--WTMQGS 338 (470)
T ss_dssp HHTTCT-TT--CSEEESCBCCBTTBCHHHHHHHHHHHHCCCEEESSSSCSHHHHHHHHHTTCCSEEBCCHHH--HCHHHH
T ss_pred HHHhcc-cc--ceeecCCCChhhccchHHHHHHHHhcCCCCEEeCCccCCHHHHHHHHHcCCCCEEEecCcc--CCHHHH
Confidence 455564 33 56777775433211124556666654 3333556666788899999888888899876421 221 2
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.+.
T Consensus 339 ~kia~lA~a~gv~~~ 353 (470)
T 3p0w_A 339 VRVAQLCDEWGLTWG 353 (470)
T ss_dssp HHHHHHHHHHTCCCB
T ss_pred HHHHHHHHHcCCEEE
Confidence 468899999999864
No 132
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=70.71 E-value=43 Score=27.56 Aligned_cols=68 Identities=15% Similarity=0.083 Sum_probs=44.2
Q ss_pred HHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEec
Q 028240 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (211)
.+-+.|+..|+++|++ |...........++.+.++++.=.+--++...++++..+++++....+.+++
T Consensus 255 ~~a~~l~~~G~d~i~v---~~~~~~~~~~~~~~~~~~v~~~~~iPvi~~Ggit~~~a~~~l~~g~aD~V~~ 322 (364)
T 1vyr_A 255 YLIEELAKRGIAYLHM---SETDLAGGKPYSEAFRQKVRERFHGVIIGAGAYTAEKAEDLIGKGLIDAVAF 322 (364)
T ss_dssp HHHHHHHHTTCSEEEE---ECCBTTBCCCCCHHHHHHHHHHCCSEEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHhCCCEEEE---ecCcccCCCcccHHHHHHHHHHCCCCEEEECCcCHHHHHHHHHCCCccEEEE
Confidence 4556677889887776 4321000000124566677776667788888889999999998876677655
No 133
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=70.26 E-value=9.8 Score=30.76 Aligned_cols=101 Identities=14% Similarity=0.102 Sum_probs=59.3
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEecc
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (211)
++.+. +..+-+.|.++|+++|.+-..-.|.....+.+.++.++.+.+...++..++. -+...++.+.+.. ++.+.+.
T Consensus 25 ~~~e~-k~~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~~g-~~~v~i~ 101 (307)
T 1ydo_A 25 IATED-KITWINQLSRTGLSYIEITSFVHPKWIPALRDAIDVAKGIDREKGVTYAALV-PNQRGLENALEGG-INEACVF 101 (307)
T ss_dssp CCHHH-HHHHHHHHHTTTCSEEEEEECSCTTTCGGGTTHHHHHHHSCCCTTCEEEEEC-CSHHHHHHHHHHT-CSEEEEE
T ss_pred CCHHH-HHHHHHHHHHcCCCEEEECCCcCcccccccCCHHHHHHHhhhcCCCeEEEEe-CCHHhHHHHHhCC-cCEEEEE
Confidence 34444 4456667799999999998765553222122334445555545566666666 3667788877653 2333332
Q ss_pred CCccc--------cCc------hhhHHHHHHHcCCeee
Q 028240 186 WSLWA--------RDI------ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 186 ~~~~~--------~~~------~~~~~~~~~~~gi~v~ 209 (211)
.+..+ ... -.+.+++|+++|+.|.
T Consensus 102 ~~~sd~~~~~~l~~s~~e~l~~~~~~v~~ak~~G~~v~ 139 (307)
T 1ydo_A 102 MSASETHNRKNINKSTSESLHILKQVNNDAQKANLTTR 139 (307)
T ss_dssp EESSHHHHHTTTCSCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred eecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 22211 111 1457899999999874
No 134
>3vc5_A Mandelate racemase/muconate lactonizing protein; dehydratase, magnesium binding, enzyme function initiative, enolase, isomerase; 1.50A {Thermobispora bispora} PDB: 3vc6_A 4dhg_A
Probab=70.21 E-value=31 Score=29.33 Aligned_cols=146 Identities=17% Similarity=0.233 Sum_probs=85.3
Q ss_pred CCHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
.++++..+..+.+++ .|++.|=.--...+-..+...=+++++ .+.-++.|-..-++ +.+.. .
T Consensus 187 ~~~e~~~~~a~~~~~~~Gf~~~KlKvG~~~~~~Di~rv~avRea~pd~~L~vDaN~~w------------~~~~A----i 250 (441)
T 3vc5_A 187 LDPDGIVAQARLLIGEYGFRSIKLKGGVFPPEQEAEAIQALRDAFPGLPLRLDPNAAW------------TVETS----I 250 (441)
T ss_dssp CSHHHHHHHHHHHHHHHCCSSEEEECSSSCHHHHHHHHHHHHHHSTTCCEEEECTTCS------------CHHHH----H
T ss_pred CCHHHHHHHHHHHHHhcCCCEEEEccCCCCHHHHHHHHHHHHHhCCCCcEeccCCCCC------------CHHHH----H
Confidence 467888888888887 499986432111110011122234444 33223333332222 33332 2
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.+++|. ++ +.++..|-+ -++.+.++++.-.+ -+.|=|-++..++.++++....+++|+..+-.-- ...
T Consensus 251 ~~~~~L~-~~--l~~iEeP~~------~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~dii~~d~~~~GGitea 321 (441)
T 3vc5_A 251 RVGRALD-GV--LEYLEDPTP------GIDGMARVAAEVPMPLATNMCVVTPEHLPAAVERRPIGVLLIDHHYWGGLVRS 321 (441)
T ss_dssp HHHHHTT-TT--CSEEECCSS------SHHHHHHHHTTSSSCEEESSSCCSGGGHHHHHHHCCCSEEEECHHHHTSHHHH
T ss_pred HHHHHHH-HH--HHHhhccCC------CHHHHHHHHhcCCCCEEeCCCCCCHHHHHHHHHhCCCCEEeechhhcCCHHHH
Confidence 3445554 33 677777742 25677777765333 3566677888999999888888999987654211 113
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.|.
T Consensus 322 ~kia~lA~~~gv~v~ 336 (441)
T 3vc5_A 322 AHIATLCATFGIELS 336 (441)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 469999999999875
No 135
>3tji_A Mandelate racemase/muconate lactonizing enzyme, N domain protein; enolase, dehydratase, enzyme function initiative, EFI, lyase; 1.80A {Enterobacter SP}
Probab=69.95 E-value=38 Score=28.56 Aligned_cols=150 Identities=11% Similarity=0.117 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-CcC-------------CC---cH------HHHHHHHHhcCCCCcEEEEecccccc
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD-KYG-------------PY---TN------EILLGKALKELPRENIQVATKFGFVE 96 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg-------------~g---~~------E~~lG~~l~~~~r~~~~i~tK~~~~~ 96 (211)
++++..+.++.+++.|++.|-.-- .++ .| .. ....=+++++.-.+++-|......
T Consensus 154 ~~e~~~~~a~~~~~~G~~~iKlKvG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~e~v~avR~avG~d~~L~vDaN~-- 231 (422)
T 3tji_A 154 TLEALFASVDALIAQGYRHIRCQLGFYGGTPSALHAPDNPTPGAWFDQQEYMSNTVEMFHALREKYGWKLHILHDVHE-- 231 (422)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEESCCCBCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHCSSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 578888888999999999876311 111 01 01 111223444321234444444421
Q ss_pred CCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhc
Q 028240 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (211)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (211)
.++.+...+ +-+.|+.+++.++ ..|-+. +.++.+.++++.-.+. +.|=+-++.+.++++++
T Consensus 232 --------~~~~~~A~~-~~~~Le~~~i~~i-----EqP~~~----~d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~ll~ 293 (422)
T 3tji_A 232 --------RLFPQQAVQ-LAKQLEPFQPYFI-----EDILPP----QQSAWLEQVRQQSCVPLALGELFNNPAEWHDLIV 293 (422)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSEE-----ECCSCG----GGGGGHHHHHHHCCCCEEECTTCCSGGGTHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhhCCCeE-----ECCCCh----hhHHHHHHHHhhCCCCEEEeCCcCCHHHHHHHHh
Confidence 124444333 2235666666544 455321 3456677777764443 34445578889999998
Q ss_pred cCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 176 VHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 176 ~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
....+++|+..+-.-. ..-..+...|+.+|+.+.
T Consensus 294 ~ga~d~v~~k~~~~GGit~~~kia~lA~a~gv~v~ 328 (422)
T 3tji_A 294 NRRIDFIRCHVSQIGGITPALKLAHLCQAFGVRLA 328 (422)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHTTCEEC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEE
Confidence 8889999998775321 113468999999999874
No 136
>3sbf_A Mandelate racemase / muconate lactonizing enzyme; enolase fold, acid sugar dehydratase, D-araninonate, isomera; HET: EPE D8T; 1.50A {Vibrionales bacterium swat-3} PDB: 3r25_A 3dfh_A 4gis_A 4gir_A 4ggh_A 3gy1_A
Probab=69.18 E-value=49 Score=27.55 Aligned_cols=150 Identities=12% Similarity=0.124 Sum_probs=88.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC-CcC-------------CC---c------HHHHHHHHHhcCCCCcEEEEecccccc
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD-KYG-------------PY---T------NEILLGKALKELPRENIQVATKFGFVE 96 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~-~Yg-------------~g---~------~E~~lG~~l~~~~r~~~~i~tK~~~~~ 96 (211)
++++..+.++.+++.|++.|-.-- .++ .| . .....=+++++.-.+++-|......
T Consensus 133 ~~e~~~~~a~~~~~~G~~~~K~KvG~~~~~~~~~~~~~~~~~g~~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~-- 210 (401)
T 3sbf_A 133 TMEGIYDLVEGFLEKGYKHIRCQLGFYGGVPTDLHTTQNPTEGSYYDQDQYMDNTLTMFKSLREKYGNQFHILHDVHE-- 210 (401)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEESCCCSCGGGSCCCSSCCSSEECCHHHHHHHHHHHHHHHHHHHTTSSEEEEECTT--
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeeccCCcccccccccccccccccccchHHHHHHHHHHHHHHHHcCCCCEEEEECCC--
Confidence 578888888999999999876321 111 01 0 1111223444321234444444321
Q ss_pred CCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhc
Q 028240 97 LGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHA 175 (211)
Q Consensus 97 ~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~ 175 (211)
.++.+...+ +-+.|+.++++++ ..|-+.. .++.+.++++.-.+. +.|=+-++...++++++
T Consensus 211 --------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~ 272 (401)
T 3sbf_A 211 --------RLFPNQAIQ-FAKEVEQYKPYFI-----EDILPPN----QTEWLDNIRSQSSVSLGLGELFNNPEEWKSLIA 272 (401)
T ss_dssp --------CSCHHHHHH-HHHHHGGGCCSCE-----ECSSCTT----CGGGHHHHHTTCCCCEEECTTCCSHHHHHHHHH
T ss_pred --------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----HHHHHHHHHhhCCCCEEeCCccCCHHHHHHHHh
Confidence 124444333 3345667776655 4554322 355677777764443 34445588999999999
Q ss_pred cCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 176 VHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 176 ~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
....+++|+..+-.-. ..-..+...|+.+|+.+.
T Consensus 273 ~~~~d~v~~k~~~~GGit~~~kia~~A~~~gi~~~ 307 (401)
T 3sbf_A 273 NRRIDFIRCHVSQIGGITPALKLGHLCQNFGVRIA 307 (401)
T ss_dssp TTCCSEECCCGGGGTSHHHHHHHHHHHHHHTCEEC
T ss_pred cCCCCEEecCccccCCHHHHHHHHHHHHHcCCEEE
Confidence 8889999998775321 112468999999999874
No 137
>3k13_A 5-methyltetrahydrofolate-homocysteine methyltrans; 5-methyltetrahydrofolate,methyltransferase, TIM barrel, STRU genomics, PSI-2; HET: MSE THH GOL; 2.00A {Bacteroides thetaiotaomicron}
Probab=68.51 E-value=41 Score=27.07 Aligned_cols=99 Identities=10% Similarity=-0.022 Sum_probs=59.2
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--Ccc-cEEEeCCCCHHHHHHHhcc--CCceE
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKI-KYIGLSEASPDTIRRAHAV--HPITA 181 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~i-r~iGvs~~~~~~l~~~~~~--~~~~~ 181 (211)
+.+.+.+..++.. .-|.+.||+-. . ....+.++.++.+..+.+. ... --|.+-+++++.++++++. ++.
T Consensus 35 ~~~~a~~~A~~~v-~~GAdiIDIg~--g-~~~v~~~eem~rvv~~i~~~~~~~~vpisIDT~~~~V~eaaL~~~~Ga~-- 108 (300)
T 3k13_A 35 KYDEALSIARQQV-EDGALVIDVNM--D-DGLLDARTEMTTFLNLIMSEPEIARVPVMIDSSKWEVIEAGLKCLQGKS-- 108 (300)
T ss_dssp CHHHHHHHHHHHH-HTTCSEEEEEC--C-CTTSCHHHHHHHHHHHHHTCHHHHTSCEEEECSCHHHHHHHHHHCSSCC--
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECC--C-CCCCCHHHHHHHHHHHHHHhhhcCCCeEEEeCCCHHHHHHHHHhcCCCC--
Confidence 4555555555544 46899999976 1 2223444444444444431 011 2478889999999999984 443
Q ss_pred EeccCCccccCc-hhhHHHHHHHcCCeeeeC
Q 028240 182 VQLEWSLWARDI-ENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 182 ~q~~~~~~~~~~-~~~~~~~~~~~gi~v~a~ 211 (211)
+-+..|...... -.++++.|+++|..|+.|
T Consensus 109 iINdIs~~~~d~~~~~~~~l~a~~ga~vV~m 139 (300)
T 3k13_A 109 IVNSISLKEGEEVFLEHARIIKQYGAATVVM 139 (300)
T ss_dssp EEEEECSTTCHHHHHHHHHHHHHHTCEEEEE
T ss_pred EEEeCCcccCChhHHHHHHHHHHhCCeEEEE
Confidence 334444443211 126899999999999864
No 138
>4hpn_A Putative uncharacterized protein; enolase, enzyme function initiative, EFI, structural genomic isomerase; 1.60A {Agrobacterium tumefaciens} PDB: 4ggb_A
Probab=67.68 E-value=50 Score=27.09 Aligned_cols=144 Identities=11% Similarity=0.052 Sum_probs=84.4
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHH--HHHHHhc-C-CCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEIL--LGKALKE-L-PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~--lG~~l~~-~-~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
.++..+-+..+.+.|++.+=.--..+ -++- .=+++++ . +.-++.|-...+ ++.+...+-+
T Consensus 145 ~~~~~~~~~~~~~~Gf~~~K~k~g~~---~~~di~~v~avr~~~g~~~~l~vDaN~~------------~~~~~A~~~~- 208 (378)
T 4hpn_A 145 VSDNASEMAERRAEGFHACKIKIGFG---VEEDLRVIAAVREAIGPDMRLMIDANHG------------YTVTEAITLG- 208 (378)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCSC---HHHHHHHHHHHHHHHTTTSEEEEECTTC------------CCHHHHHHHH-
T ss_pred HHHHHHHHHHHHHhccceecccccCC---hHHHHHHHHHHHHhcCCcEEEEEecCcc------------cCHHHHHHHH-
Confidence 34555666777889999775433222 2221 2233443 2 222333332222 2444433322
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCccccC-ch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~ 194 (211)
+.|+.+ ++.++..|-+..+ ++.+.+|+++-.+. +.|=|-++...+.++++....+++|+...-.--- .-
T Consensus 209 ~~l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~~d~~~~GGit~~ 279 (378)
T 4hpn_A 209 DRAAGF-----GIDWFEEPVVPEQ----LDAYARVRAGQPIPVAGGETWHGRYGMWQALSAGAVDILQPDLCGCGGFSEI 279 (378)
T ss_dssp HHHGGG-----CCSCEECCSCTTC----HHHHHHHHHHSSSCEEECTTCCHHHHHHHHHHTTCCSEECCBTTTTTHHHHH
T ss_pred hhhhhc-----ccchhhcCCCccc----hhhhHHHHhhCCceeeCCcCccchHhHHHHHHcCCCCEEeeCCeeCCChhHH
Confidence 234444 4556667754333 56677777664443 5666778899999999988899999987743210 12
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+++|+.|.
T Consensus 280 ~~ia~~A~~~gi~v~ 294 (378)
T 4hpn_A 280 QKIATLATLHGVRIV 294 (378)
T ss_dssp HHHHHHHHHHTCEEC
T ss_pred HHHHHHHHHcCCeEE
Confidence 468999999999874
No 139
>1icp_A OPR1, 12-oxophytodienoate reductase 1; beta-alpha-barrel, protein-FMN-PEG complex, oxidoreductase; HET: FMN 2PE; 1.90A {Solanum lycopersicum} SCOP: c.1.4.1 PDB: 1icq_A* 1ics_A* 3hgr_A* 1vji_A* 2q3r_A*
Probab=67.21 E-value=53 Score=27.19 Aligned_cols=135 Identities=15% Similarity=0.090 Sum_probs=71.8
Q ss_pred HHHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHHH---HHHHHh---c-CCCCcEEEEeccccc
Q 028240 42 EDGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEIL---LGKALK---E-LPRENIQVATKFGFV 95 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~~---lG~~l~---~-~~r~~~~i~tK~~~~ 95 (211)
++..+..+.|.++|+..+|. | +.||. .-|.. +-+.++ + +..+ .|..|+.+.
T Consensus 167 ~~f~~AA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~avg~~--~V~vrls~~ 243 (376)
T 1icp_A 167 NEFRVAARNAIEAGFDGVEIHGAHGYLIDQFMKDQVNDRSDKYGG-SLENRCRFALEIVEAVANEIGSD--RVGIRISPF 243 (376)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGG--GEEEEECTT
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccchhhhhccCCcccCCCCccCc-cHHHhHHHHHHHHHHHHHHhcCC--ceEEEeccc
Confidence 34556667778999998873 2 33542 22222 222222 2 2222 466687653
Q ss_pred cCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCC--CHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHH
Q 028240 96 ELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV--PIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRA 173 (211)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~--~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~ 173 (211)
.... +.... ....-...+-+.|+..|+++|++ |...... +....++.+.++++.=.+--++...++++..+++
T Consensus 244 ~~~~-g~~~~-~~~~~~~~la~~le~~Gvd~i~v---~~~~~~~~~~~~~~~~~~~~vr~~~~iPvi~~G~i~~~~a~~~ 318 (376)
T 1icp_A 244 AHYN-EAGDT-NPTALGLYMVESLNKYDLAYCHV---VEPRMKTAWEKIECTESLVPMRKAYKGTFIVAGGYDREDGNRA 318 (376)
T ss_dssp CCTT-TCCCS-CHHHHHHHHHHHHGGGCCSEEEE---ECCSCCC------CCCCSHHHHHHCCSCEEEESSCCHHHHHHH
T ss_pred cccC-CCCCC-CCHHHHHHHHHHHHHcCCCEEEE---cCCcccCCCCccccHHHHHHHHHHcCCCEEEeCCCCHHHHHHH
Confidence 2210 00001 12222345667788889877766 4332110 1001234455666655567777778888888888
Q ss_pred hccCCceEEec
Q 028240 174 HAVHPITAVQL 184 (211)
Q Consensus 174 ~~~~~~~~~q~ 184 (211)
++....+.+++
T Consensus 319 l~~g~aD~V~~ 329 (376)
T 1icp_A 319 LIEDRADLVAY 329 (376)
T ss_dssp HHTTSCSEEEE
T ss_pred HHCCCCcEEee
Confidence 88776666655
No 140
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=66.88 E-value=51 Score=26.86 Aligned_cols=95 Identities=9% Similarity=-0.072 Sum_probs=54.2
Q ss_pred cEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEe-ecCCC-CCCHHHHHHHHHHHHHcCcccEEEe
Q 028240 85 NIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQ-HRVDT-SVPIEETIGEMKKLVEEGKIKYIGL 162 (211)
Q Consensus 85 ~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~l-h~~~~-~~~~~~~~~~l~~l~~~G~ir~iGv 162 (211)
++-|..|+.+.....++ .+.+.. ..+-+.|+..|+|+|++-.= ..+.. .......++.+.++++.=.+--+++
T Consensus 209 ~~pv~vRls~~~~~~~g----~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~ik~~~~iPVi~~ 283 (340)
T 3gr7_A 209 DGPLFVRISASDYHPDG----LTAKDY-VPYAKRMKEQGVDLVDVSSGAIVPARMNVYPGYQVPFAELIRREADIPTGAV 283 (340)
T ss_dssp CSCEEEEEESCCCSTTS----CCGGGH-HHHHHHHHHTTCCEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHTTCCEEEE
T ss_pred CCceEEEeccccccCCC----CCHHHH-HHHHHHHHHcCCCEEEEecCCccCCCCCCCccccHHHHHHHHHHcCCcEEee
Confidence 45577788764322211 123332 23556677889887776421 01100 0111123556666666656777888
Q ss_pred CCC-CHHHHHHHhccCCceEEec
Q 028240 163 SEA-SPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 163 s~~-~~~~l~~~~~~~~~~~~q~ 184 (211)
... +++..+++++....+.+++
T Consensus 284 GgI~s~e~a~~~L~~G~aD~V~i 306 (340)
T 3gr7_A 284 GLITSGWQAEEILQNGRADLVFL 306 (340)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEE
T ss_pred CCCCCHHHHHHHHHCCCeeEEEe
Confidence 775 7899999998876776665
No 141
>1vpq_A Hypothetical protein TM1631; structural genomics, joint center for structural genomics, J protein structure initiative, PSI; 2.20A {Thermotoga maritima} SCOP: c.1.32.1
Probab=66.48 E-value=39 Score=26.71 Aligned_cols=136 Identities=10% Similarity=0.035 Sum_probs=76.0
Q ss_pred cccceeccccCCC----CCCCCCCHHHHHHHHHHHHH-cCCCeEeC-CCCcCCCcHHHHHHHHHhcCCCCcEEEEecccc
Q 028240 21 VSKLGYGCMSLSG----CYNSPLSEEDGISIIKHAFS-KGITFFDT-ADKYGPYTNEILLGKALKELPRENIQVATKFGF 94 (211)
Q Consensus 21 vs~lg~G~~~~~~----~~~~~~~~~~~~~~l~~A~~-~Gi~~~Dt-A~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~ 94 (211)
+-.||.++|+..+ .|+...+.. +-|+...+ --++.++. +..|..= +++.+.++.++. .+++..+.|...
T Consensus 13 ~i~iG~sgW~~~~W~G~fYP~~~~~~---~~L~~Ya~~~~F~tVEiNsTFY~~p-~~~t~~~W~~~t-P~~F~F~vKa~r 87 (273)
T 1vpq_A 13 MVYVGTSGFSFEDWKGVVYPEHLKPS---QFLKYYWAVLGFRIVELNFTYYTQP-SWRSFVQMLRKT-PPDFYFTVKTPG 87 (273)
T ss_dssp EEEEEEBCSCCSTTBTTTBCTTCCGG---GHHHHHHHTSCCCEEEECCCSSSSS-CHHHHHHHHTTS-CTTCEEEEECCH
T ss_pred eEEEECCCCCCCCcCcccCCCCCCch---HHHHHHhCCCCCCeEEECccccCCC-CHHHHHHHHHhC-CCCeEEEEEeCh
Confidence 4467777776643 122222222 33444433 15776654 3366532 778888898874 578999999864
Q ss_pred ccCCCcccccCCChHHHHHHHHHHHhhc--CCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeC
Q 028240 95 VELGFTSVIVKGTPEYVRSCCEASLRRL--DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLS 163 (211)
Q Consensus 95 ~~~~~~~~~~~~s~~~i~~~~~~sL~~L--g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs 163 (211)
....... ......+..-+.+-++++-| | +++..+++.-|..-..-.+.++.|+.+.+. |.--++=+-
T Consensus 88 ~iTh~~~-~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~l~~~l~~~~AvE~R 157 (273)
T 1vpq_A 88 SVTHVLW-KEGKDPKEDMENFTRQIEPLIEE-QRLKMTLAQFPFSFKFSRKNVEYLEKLRESYPYELAVEFR 157 (273)
T ss_dssp HHHHTHH-HHTCCSHHHHHHHHHHHHHHHHT-TCEEEEEEECCTTCCCCHHHHHHHHHHHHHCCSCEEEECC
T ss_pred hhccccc-ccccchHHHHHHHHHHHHhhccC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHHHcCCCEEEEcc
Confidence 3211100 00011122234444577788 7 789999999986544334556667777555 544444443
No 142
>4e4u_A Mandalate racemase/muconate lactonizing enzyme; mandelate racemase, aldolase, structural genomics, biology; 1.35A {Unidentified}
Probab=66.38 E-value=57 Score=27.30 Aligned_cols=150 Identities=9% Similarity=0.022 Sum_probs=89.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCC--CcCC--Cc------HHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTAD--KYGP--YT------NEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKGT 107 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~--~Yg~--g~------~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s 107 (211)
++++..+..+.+++.|++.|-.-. .|.. |. -+. ..=+++++.-.+++-|...... .++
T Consensus 144 ~~e~~~~~a~~~~~~G~~~iKlK~g~~~~~~~g~~~~~~~~~~d~~~v~avR~a~G~d~~l~vDaN~----------~~~ 213 (412)
T 4e4u_A 144 DPDLAAECAAENVKLGFTAVKFDPAGPYTAYSGHQLSLEVLDRCELFCRRVREAVGSKADLLFGTHG----------QMV 213 (412)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEECCSCCCBTTCCBCCCHHHHHHHHHHHHHHHHHHTTSSEEEECCCS----------CBC
T ss_pred CHHHHHHHHHHHHHcCCCEEEECCCCCCccccccccchhhHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCC
Confidence 678888888899999999987632 1110 00 011 1223344322234445444332 124
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccC
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
.+...+ +-+.|+.++++++ ..|-+.. .++.+.++++.-.+. +.|=+-++...++++++....+++|+..
T Consensus 214 ~~~A~~-~~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~ 283 (412)
T 4e4u_A 214 PSSAIR-LAKRLEKYDPLWF-----EEPVPPG----QEEAIAQVAKHTSIPIATGERLTTKYEFHKLLQAGGASILQLNV 283 (412)
T ss_dssp HHHHHH-HHHHHGGGCCSEE-----ECCSCSS----CHHHHHHHHHTCSSCEEECTTCCHHHHHHHHHHTTCCSEECCCT
T ss_pred HHHHHH-HHHHhhhcCCcEE-----ECCCChh----hHHHHHHHHhhCCCCEEecCccCCHHHHHHHHHcCCCCEEEeCc
Confidence 444333 3345666776544 4554322 367788888775554 3344457888999999988899999987
Q ss_pred Ccccc-CchhhHHHHHHHcCCeee
Q 028240 187 SLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 187 ~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+-.=- ..-..+...|+++|+.+.
T Consensus 284 ~~~GGit~~~kia~~A~~~gi~v~ 307 (412)
T 4e4u_A 284 ARVGGLLEAKKIATLAEVHYAQIA 307 (412)
T ss_dssp TTTTSHHHHHHHHHHHHHTTCEEC
T ss_pred cccCCHHHHHHHHHHHHHcCCEEE
Confidence 75321 123468999999999874
No 143
>3l5a_A NADH/flavin oxidoreductase/NADH oxidase; OLD yellow enzyme family, OYE-like FMN-binding domain, TIM B oxidoreductase; HET: PGE; 1.65A {Staphylococcus aureus}
Probab=66.22 E-value=50 Score=27.88 Aligned_cols=97 Identities=13% Similarity=0.048 Sum_probs=50.6
Q ss_pred CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh-cCCCceeEEEeec-----CCCCCCHHHHHHHHHHHHHc--
Q 028240 83 RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR-LDVEYIDLYYQHR-----VDTSVPIEETIGEMKKLVEE-- 154 (211)
Q Consensus 83 r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~-Lg~~~iDl~~lh~-----~~~~~~~~~~~~~l~~l~~~-- 154 (211)
.+++.|..|+.+.....+. ...+.+...+ +-+.|+. .|+|||++-.-.. ..........++..+.+++.
T Consensus 240 ~~~f~v~vRis~~~~~~~~--~G~~~ed~~~-la~~L~~~~Gvd~I~vs~g~~~~~~~~~~~~g~~~~~~~a~~Ik~~v~ 316 (419)
T 3l5a_A 240 PDNFILGFRATPEETRGSD--LGYTIDEFNQ-LIDWVMDVSNIQYLAIASWGRHIYQNTSRTPGDHFGRPVNQIVYEHLA 316 (419)
T ss_dssp CTTCEEEEEECSCEEETTE--EEECHHHHHH-HHHHHHHHSCCCCEEECCTTCCGGGCBCCCSSTTTTSBHHHHHHHHHT
T ss_pred CCCeeEEEecccccccCCC--CCCCHHHHHH-HHHHHHhhcCCcEEEEeeCCccccccccCCCCccccHHHHHHHHHHcC
Confidence 4578899998764322110 0123444333 3445555 8988877643211 00000100112333444432
Q ss_pred CcccEEEeCC-CCHHHHHHHhccCCceEEec
Q 028240 155 GKIKYIGLSE-ASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 155 G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~ 184 (211)
|.+--|++.. .+++..+++++. .+.+.+
T Consensus 317 ~~iPVI~~GgI~t~e~Ae~~L~~--aDlVai 345 (419)
T 3l5a_A 317 GRIPLIASGGINSPESALDALQH--ADMVGM 345 (419)
T ss_dssp TSSCEEECSSCCSHHHHHHHGGG--CSEEEE
T ss_pred CCCeEEEECCCCCHHHHHHHHHh--CCcHHH
Confidence 4677888887 588999988876 455543
No 144
>2al1_A Enolase 1, 2-phospho-D-; beta barrel, lyase; HET: PEP 2PG; 1.50A {Saccharomyces cerevisiae} SCOP: c.1.11.1 d.54.1.1 PDB: 1ebg_A 1ebh_A* 1one_A* 2one_A* 1p48_A* 1p43_A* 1l8p_A 4enl_A 1nel_A 1els_A 3enl_A 5enl_A* 6enl_A 7enl_A* 2al2_A* 2al2_B* 2xh7_A* 2xgz_A* 2xh2_A* 2xh4_A* ...
Probab=65.07 E-value=48 Score=28.11 Aligned_cols=95 Identities=9% Similarity=-0.013 Sum_probs=66.0
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC--CCHHHHHHHhccCCceEEe
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE--ASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~--~~~~~l~~~~~~~~~~~~q 183 (211)
++++...+.+.+.++.+ +++++..|-+.. -|+.+.+|.++..|.-.|=-. ++++.+.++++....+++|
T Consensus 273 ~t~~eai~~~~~~l~~y-----~i~~iEdPl~~d----D~~g~~~l~~~~~ipI~gDE~~vt~~~~~~~~i~~~a~d~i~ 343 (436)
T 2al1_A 273 LTGPQLADLYHSLMKRY-----PIVSIEDPFAED----DWEAWSHFFKTAGIQIVADDLTVTNPKRIATAIEKKAADALL 343 (436)
T ss_dssp BCHHHHHHHHHHHHHHS-----CEEEEECCSCTT----CHHHHHHHHTTCCSEEEESTTTTTCHHHHHHHHHTTCCSEEE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCCCc----CHHHHHHHHhcCCCeEEECCcccCCHHHHHHHHHhCCCCEEE
Confidence 35666666666666654 467888875443 377778888777766554444 3789999999988888998
Q ss_pred ccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 184 LEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 184 ~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+..|-.-. ....++...|+.+|+.++
T Consensus 344 ikv~qiGGitea~~ia~lA~~~g~~~~ 370 (436)
T 2al1_A 344 LKVNQIGTLSESIKAAQDSFAAGWGVM 370 (436)
T ss_dssp ECHHHHCCHHHHHHHHHHHHHTTCEEE
T ss_pred echhhcCCHHHHHHHHHHHHHcCCeEE
Confidence 87763211 123468999999999864
No 145
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=64.38 E-value=10 Score=30.40 Aligned_cols=101 Identities=11% Similarity=-0.024 Sum_probs=57.2
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEecc
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (211)
++.+... .+-+.|.++|+++|.+-....|.....+.+.++.++.+.+...++..++. .+...++.+.+.. ++.+.+.
T Consensus 24 ~~~e~k~-~i~~~L~~~Gv~~IE~g~~~~~~~~p~~~d~~~~~~~~~~~~~~~~~~l~-~~~~~i~~a~~ag-~~~v~i~ 100 (298)
T 2cw6_A 24 VSTPVKI-KLIDMLSEAGLSVIETTSFVSPKWVPQMGDHTEVLKGIQKFPGINYPVLT-PNLKGFEAAVAAG-AKEVVIF 100 (298)
T ss_dssp CCHHHHH-HHHHHHHHTTCSEECCEECCCTTTCGGGTTHHHHHHHSCCCTTCBCCEEC-CSHHHHHHHHHTT-CSEEEEE
T ss_pred CCHHHHH-HHHHHHHHcCcCEEEECCCcCcccccccCCHHHHHHHHhhCCCCEEEEEc-CCHHhHHHHHHCC-CCEEEEE
Confidence 4555544 56667789999999998765553221112333444444443334443444 4677788887753 3444443
Q ss_pred CCcccc--------C------chhhHHHHHHHcCCeee
Q 028240 186 WSLWAR--------D------IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 186 ~~~~~~--------~------~~~~~~~~~~~~gi~v~ 209 (211)
.+..+. . .-.+.+++|+++|+.|.
T Consensus 101 ~~~sd~~~~~~~~~~~~e~l~~~~~~i~~a~~~G~~v~ 138 (298)
T 2cw6_A 101 GAASELFTKKNINCSIEESFQRFDAILKAAQSANISVR 138 (298)
T ss_dssp EESCHHHHHHHHSCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred ecCCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCeEE
Confidence 333221 1 11357899999999875
No 146
>3mkc_A Racemase; metabolic process, PSI2, NYSGXRC, structu genomics, protein structure initiative, NEW YORK SGX resear for structural genomics; 1.77A {Pseudovibrio SP} PDB: 3nzg_A
Probab=64.07 E-value=62 Score=26.86 Aligned_cols=147 Identities=9% Similarity=0.048 Sum_probs=84.6
Q ss_pred HHHHHHHHHHHcCCCeEeC-CCCcCCCcHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCC-ChHHHHHHHHHH
Q 028240 43 DGISIIKHAFSKGITFFDT-ADKYGPYTNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEAS 118 (211)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt-A~~Yg~g~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~s 118 (211)
+..+.++.+++.|++.|=. --......-++ ..=+++++.-.+++.|...... .+ +.+...+ +-+.
T Consensus 160 ~~~~~a~~~~~~G~~~~K~~k~g~~~~~~~~d~e~v~avR~a~G~d~~l~vDaN~----------~~~~~~~A~~-~~~~ 228 (394)
T 3mkc_A 160 GYAPLLEKAKAHNIRAVKVCVPIKADWSTKEVAYYLRELRGILGHDTDMMVDYLY----------RFTDWYEVAR-LLNS 228 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEECCTTCCCCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCCCHHHHHH-HHHH
T ss_pred HHHHHHHHHHHcCCCEEEeCccCCCccCHHHHHHHHHHHHHHhCCCCeEEEeCCC----------CCCCHHHHHH-HHHH
Confidence 4556777888999998765 11110011222 2234444421234444433321 22 3443333 2334
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++++ +..|-+.. .++.+.++++.-.+. ..|=+-++...++++++....+++|+..+-.-. ..-..
T Consensus 229 L~~~~i~~-----iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~~ 299 (394)
T 3mkc_A 229 IEDLELYF-----AEATLQHD----DLSGHAKLVENTRSRICGAEMSTTRFEAEEWITKGKVHLLQSDYNRCGGLTELRR 299 (394)
T ss_dssp TGGGCCSE-----EESCSCTT----CHHHHHHHHHHCSSCBEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHH
T ss_pred hhhcCCeE-----EECCCCch----hHHHHHHHHhhCCCCEEeCCCCCCHHHHHHHHHcCCCCeEecCccccCCHHHHHH
Confidence 56666554 45564322 356677787764444 344455788899999998889999998775321 11346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 300 ia~~A~~~gi~~~ 312 (394)
T 3mkc_A 300 ITEMATANNVQVM 312 (394)
T ss_dssp HHHHHHHTTCEEC
T ss_pred HHHHHHHcCCEEe
Confidence 8999999999875
No 147
>1ydo_A HMG-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative, northeast structural genomics consortium, NESG,; 2.71A {Bacillus subtilis subsp}
Probab=63.20 E-value=51 Score=26.48 Aligned_cols=26 Identities=19% Similarity=0.409 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 38 PLSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
..+.++..++++...+.|+..|+...
T Consensus 24 ~~~~e~k~~i~~~L~~~Gv~~IE~g~ 49 (307)
T 1ydo_A 24 WIATEDKITWINQLSRTGLSYIEITS 49 (307)
T ss_dssp CCCHHHHHHHHHHHHTTTCSEEEEEE
T ss_pred CCCHHHHHHHHHHHHHcCCCEEEECC
Confidence 35779999999999999999999873
No 148
>2uyg_A 3-dehydroquinate dehydratase; typeii 3-dehydroquinase, lyase; 2.2A {Thermus thermophilus}
Probab=62.66 E-value=20 Score=25.75 Aligned_cols=81 Identities=15% Similarity=0.114 Sum_probs=59.4
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc---CcccEEEeCCCCHHHHHHHhccCCceE
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPDTIRRAHAVHPITA 181 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~~~~ 181 (211)
..+.+.|.+.+++.-+.+|++ ++++|-. .-.+.++++.+..+. |.|--=|--+++.-.+.+++....+-+
T Consensus 23 ~~tl~di~~~l~~~a~~~g~~-v~~~QSN------~EgeLId~Ih~a~~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~ 95 (149)
T 2uyg_A 23 RTTLEELEALCEAWGAELGLG-VVFRQTN------YEGQLIEWVQQAHQEGFLAIVLNPGALTHYSYALLDAIRAQPLPV 95 (149)
T ss_dssp SCCHHHHHHHHHHHHHHTTCC-EEEEECS------CHHHHHHHHHHTTTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCE
T ss_pred cCCHHHHHHHHHHHHHHcCCE-EEEEeeC------CHHHHHHHHHHhccCCeeEEEEccchhccccHHHHHHHHhCCCCE
Confidence 347899999999999999974 7777622 123678888877654 445455666777778888888877778
Q ss_pred EeccCCccccC
Q 028240 182 VQLEWSLWARD 192 (211)
Q Consensus 182 ~q~~~~~~~~~ 192 (211)
+.++.|-.+.+
T Consensus 96 VEVHiSNi~aR 106 (149)
T 2uyg_A 96 VEVHLTNLHAR 106 (149)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEecCcccc
Confidence 88888866543
No 149
>3vcn_A Mannonate dehydratase; enolase, magnesium binding site, enzyme function initiative, lyase; 1.45A {Caulobacter crescentus} PDB: 4gme_A* 4fi4_A 3thu_A
Probab=62.51 E-value=69 Score=26.91 Aligned_cols=149 Identities=11% Similarity=0.063 Sum_probs=87.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEe--CCC-----CcC---------------CC-----------cHHHHHHHHHhcCCCCcE
Q 028240 40 SEEDGISIIKHAFSKGITFFD--TAD-----KYG---------------PY-----------TNEILLGKALKELPRENI 86 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~D--tA~-----~Yg---------------~g-----------~~E~~lG~~l~~~~r~~~ 86 (211)
++++..+.++.+++.|++.|= ... .|| ++ ...+.+ +++++.-.+++
T Consensus 150 ~~e~~~~~a~~~~~~Gf~~iKlKvg~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v-~avR~a~G~d~ 228 (425)
T 3vcn_A 150 TIEDTIAEAVKYKAMGYKAIRLQTGVPGLASTYGVSKDKMFYEPADNDLPTENIWSTAKYLNSVPKLF-ERAREVLGWDV 228 (425)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCSSCSSCCCCCCBSSCCEEEECHHHHHTTTHHHH-HHHHHHHCSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeecCccccccccccccccccCcccccccccccccchhHHHHHHHHH-HHHHHHcCCCC
Confidence 578888888999999999753 221 122 01 012222 44444212344
Q ss_pred EEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCC
Q 028240 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEA 165 (211)
Q Consensus 87 ~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~ 165 (211)
-|...... .++.+...+ +-+.|+.++++++ +.|-+.. .++.+.++++.-.+. ..|=+-+
T Consensus 229 ~l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~ 288 (425)
T 3vcn_A 229 HLLHDVHH----------RLTPIEAAR-LGKDLEPYRLFWL-----EDSVPAE----NQAGFRLIRQHTTTPLAVGEIFA 288 (425)
T ss_dssp EEEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCC
T ss_pred EEEEECCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChh----hHHHHHHHHhcCCCCEEeCCCcC
Confidence 44433321 124444433 3345667776554 4554322 345677777664444 3344457
Q ss_pred CHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 166 SPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 166 ~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+...++++++....+++|+..+-.-. ..-..+...|+++|+.+.
T Consensus 289 ~~~~~~~~i~~~a~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~ 333 (425)
T 3vcn_A 289 HVWDAKQLIEEQLIDYLRATVLHAGGITNLKKIAAFADLHHVKTG 333 (425)
T ss_dssp SGGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHGGGTCEEC
T ss_pred CHHHHHHHHHcCCCCeEecChhhcCCHHHHHHHHHHHHHcCCEEe
Confidence 88899999998889999998775321 113468999999999874
No 150
>1olt_A Oxygen-independent coproporphyrinogen III oxidase; heme biosynthesis, decarboxylase, radical SAM enzyme, 4Fe- 4 cluster; HET: SAM; 2.07A {Escherichia coli} SCOP: c.1.28.2
Probab=62.36 E-value=21 Score=30.33 Aligned_cols=58 Identities=14% Similarity=0.239 Sum_probs=38.1
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEee-cCCCC-----------CCHH---HHHH-HHHHHHHcCcccEEEeCCCC
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTS-----------VPIE---ETIG-EMKKLVEEGKIKYIGLSEAS 166 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~~-----------~~~~---~~~~-~l~~l~~~G~ir~iGvs~~~ 166 (211)
+.+.+.+.++... .|+.+++.+|.+. .|... .+.+ +.++ +.+.|.+.| ...+++|||.
T Consensus 218 t~e~~~~tl~~~~-~l~~~~i~~y~l~~~p~t~~~~~~~~~~~lp~~~~~~~~~~~~~~~L~~~G-y~~yeis~fa 291 (457)
T 1olt_A 218 TPESFAFTLKRVA-ELNPDRLSVFNYAHLPTIFAAQRKIKDADLPSPQQKLDILQETIAFLTQSG-YQFIGMDHFA 291 (457)
T ss_dssp CHHHHHHHHHHHH-HHCCSEEEEEECCCCTTTSGGGGGSCGGGSCCHHHHHHHHHHHHHHHHHTT-CEEEETTEEE
T ss_pred CHHHHHHHHHHHH-hcCcCEEEeecCcCCcCchhHhhccccCCCcCHHHHHHHHHHHHHHHHHCC-CeEEEechhc
Confidence 6788888887764 6899999999775 33210 1112 2233 445566667 5899999974
No 151
>2ptz_A Enolase; lyase, glycolysis,His-TAG; 1.65A {Trypanosoma brucei} SCOP: c.1.11.1 d.54.1.1 PDB: 2ptx_A 2pty_A* 2ptw_A 2pu0_A 2pu1_A* 1oep_A
Probab=62.28 E-value=67 Score=27.11 Aligned_cols=94 Identities=13% Similarity=0.048 Sum_probs=63.1
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC--cccEEEeCC--CCHHHHHHHhccCCceEE
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG--KIKYIGLSE--ASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G--~ir~iGvs~--~~~~~l~~~~~~~~~~~~ 182 (211)
++..+.+-+.+.++.+ +++++..|-+..+ |+.+.+|.++- .|.-+|=-. ++++.+.++++....+++
T Consensus 273 ~a~~~~~~~~~~l~~y-----~i~~iEdPl~~~D----~~g~~~l~~~~g~~ipI~gDe~~v~~~~~~~~~i~~~a~d~i 343 (432)
T 2ptz_A 273 TAEQLRETYCKWAHDY-----PIVSIEDPYDQDD----FAGFAGITEALKGKTQIVGDDLTVTNTERIKMAIEKKACNSL 343 (432)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHTTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHhC-----CceEEECCCCcch----HHHHHHHHHhcCCCCeEEecCcccCCHHHHHHHHHcCCCCEE
Confidence 4455555555556554 5788888865443 66666676653 455444433 688999999998888999
Q ss_pred eccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 183 QLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 183 q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
|+..+-.-. ....++...|+++|+.++
T Consensus 344 ~ik~~~~GGitea~~i~~lA~~~g~~v~ 371 (432)
T 2ptz_A 344 LLKINQIGTISEAIASSKLCMENGWSVM 371 (432)
T ss_dssp EECHHHHCCHHHHHHHHHHHHHTTCEEE
T ss_pred EecccccCCHHHHHHHHHHHHHcCCeEE
Confidence 997774211 113468999999999985
No 152
>2chr_A Chloromuconate cycloisomerase; 3.00A {Cupriavidus necator} SCOP: c.1.11.2 d.54.1.1
Probab=61.91 E-value=64 Score=26.31 Aligned_cols=148 Identities=8% Similarity=0.015 Sum_probs=85.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
+++...+..+.+.+.|++.|=.--...+ -+. ..-+++++.-.+++.|..-... .++.+...+- -+
T Consensus 143 ~~~~~~~~~~~~~~~g~~~~K~Kvg~~~--~~~d~~~v~avr~~~g~~~~l~vDaN~----------~~~~~~A~~~-~~ 209 (370)
T 2chr_A 143 TKRDLDSAVEMIERRRHNRFKVKLGFRS--PQDDLIHMEALSNSLGSKAYLRVDVNQ----------AWDEQVASVY-IP 209 (370)
T ss_dssp HHHHHHHHHHHHHTTSCCEEEEECSSSC--HHHHHHHHHHHHHHTTTTSEEEEECTT----------CCCTHHHHHH-HH
T ss_pred hhhhHHHHHHHHhhcccceeecccccCC--hHHHHHHHHHHHHhcCCCcEEEecCCC----------CCCHHHHHHH-HH
Confidence 4566777778888889987654332221 222 2223344322233333332221 1234333322 23
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchh
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 195 (211)
.|+.+ ++.++..|-+..+ ++.+.+|+++-.+. +.|=|-++...+.++++....+++|+...-.-- ..-.
T Consensus 210 ~l~~~-----~~~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~i~~d~~~~GGit~~~ 280 (370)
T 2chr_A 210 ELEAL-----GVELIEQPVGREN----TQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQ 280 (370)
T ss_dssp HHHTT-----TCCEEECCSCSSC----HHHHHHHHHHCSSEEEESSSCCSHHHHHHHHTTTCCSEECCCHHHHTSHHHHH
T ss_pred HHHhc-----CCceecCCCChhh----hhhhhHHhhhccCCccCCccCCCHHHHHHHHHcCCCcEEEeCCcccCCHHHHH
Confidence 33444 4566777754333 56777887765553 556666899999999998888999987664311 0124
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++||.+.
T Consensus 281 ~ia~~A~~~gi~~~ 294 (370)
T 2chr_A 281 KIAAVAEASGIASY 294 (370)
T ss_dssp HHHHHHHHHTCEEC
T ss_pred HHHHHHHHcCCeEE
Confidence 68999999999874
No 153
>1wuf_A Hypothetical protein LIN2664; structural genomics, unknown function, nysgxrc target T2186, superfamily, protein structure initiative, PSI; 2.90A {Listeria innocua} SCOP: c.1.11.2 d.54.1.1
Probab=60.78 E-value=70 Score=26.43 Aligned_cols=145 Identities=12% Similarity=0.110 Sum_probs=85.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+.++.+++.|++.|-.-- |.....+.+ +++++.- .++.|..-... .++.+.. +-+ +.|
T Consensus 161 ~~e~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~-~~~~l~vDaN~----------~~~~~~a-~~~-~~l 224 (393)
T 1wuf_A 161 NVETLLQLVNQYVDQGYERVKLKI--APNKDIQFV-EAVRKSF-PKLSLMADANS----------AYNREDF-LLL-KEL 224 (393)
T ss_dssp CHHHHHHHHHHHHHHTCCEEEEEC--BTTBSHHHH-HHHHTTC-TTSEEEEECTT----------CCCGGGH-HHH-HTT
T ss_pred CHHHHHHHHHHHHHHhhHhheecc--ChHHHHHHH-HHHHHHc-CCCEEEEECCC----------CCCHHHH-HHH-HHH
Confidence 467777778888899999864311 122233444 5555422 23433333221 1244444 322 334
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+ ++.++..|-+..+ ++.+.+|+++-.+. +.|=|-++...+.++++....+++|+..+-.-. .....+
T Consensus 225 ~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~~~~i 295 (393)
T 1wuf_A 225 DQY-----DLEMIEQPFGTKD----FVDHAWLQKQLKTRICLDENIRSVKDVEQAHSIGSCRAINLKLARVGGMSSALKI 295 (393)
T ss_dssp GGG-----TCSEEECCSCSSC----SHHHHHHHTTCSSEEEECTTCCSHHHHHHHHHHTCCSEEEECTGGGTSHHHHHHH
T ss_pred HhC-----CCeEEECCCCCcC----HHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHhCCCCEEEeChhhhCCHHHHHHH
Confidence 444 4556667754332 55666676654332 444455789999999988888999998775321 112468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 296 a~~A~~~gi~~~ 307 (393)
T 1wuf_A 296 AEYCALNEILVW 307 (393)
T ss_dssp HHHHHHTTCEEE
T ss_pred HHHHHHcCCeEE
Confidence 999999999875
No 154
>4h1z_A Enolase Q92ZS5; dehydratase, magnesium binding site, enzyme function initiat isomerase; 2.01A {Sinorhizobium meliloti} PDB: 2ppg_A
Probab=60.71 E-value=73 Score=26.59 Aligned_cols=147 Identities=12% Similarity=0.098 Sum_probs=87.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
++++..+..+.+.+.|++.|=.....+.....+.+ +++++.-.+++.|..-... .++.+...+-+ +.|
T Consensus 188 ~~~~~~~~a~~~~~~G~~~~K~k~g~~~~~~~~~v-~~vR~~~g~~~~l~vDaN~----------~~~~~~A~~~~-~~l 255 (412)
T 4h1z_A 188 TRAKRAELAAAWQAKGFSSFKFASPVADDGVAKEM-EILRERLGPAVRIACDMHW----------AHTASEAVALI-KAM 255 (412)
T ss_dssp SHHHHHHHHHHHHHTTCCEEEEEGGGCTTCHHHHH-HHHHHHHCSSSEEEEECCS----------CCCHHHHHHHH-HHH
T ss_pred cHHHHHHHHHHHHhcCcceeccccccchhhHHHHH-HHHHhccCCeEEEEecccc----------CCCHHHHHHHH-Hhh
Confidence 56777788888899999987654333322233333 3444311223333222211 12444333222 223
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCccccCc--hhh
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDI--ENE 196 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~--~~~ 196 (211)
+. .++.++..|-+..+ ++.+.+|+++-.+ -+.|=|-++...+.++++....+++|.... .-+. -..
T Consensus 256 ~~-----~~l~~iEqP~~~~d----~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~div~~d~~--~GGit~~~k 324 (412)
T 4h1z_A 256 EP-----HGLWFAEAPVRTED----IDGLARVAASVSTAIAVGEEWRTVHDMVPRVARRALAIVQPEMG--HKGITQFMR 324 (412)
T ss_dssp GG-----GCEEEEECCSCTTC----HHHHHHHHHHCSSEEEECTTCCSHHHHHHHHHTTCCSEECCCHH--HHHHHHHHH
T ss_pred cc-----cccceecCCCCccc----hHHHHHHHhhcCCccccCCcccchHhHHHHHHcCCCCEEEecCC--CCChHHHHH
Confidence 33 45778888855433 5667777766443 345666789999999999888899998853 2222 246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+.+|+.+.
T Consensus 325 ia~~A~~~gi~v~ 337 (412)
T 4h1z_A 325 IGAYAHVHHIKVI 337 (412)
T ss_dssp HHHHHHHTTCEEC
T ss_pred HHHHHHHCCCcEE
Confidence 8889999999875
No 155
>2xvc_A ESCRT-III, SSO0910; cell cycle, cell division, cytokinesis, winged-helix; 2.15A {Sulfolobus solfataricus}
Probab=60.57 E-value=7.6 Score=23.19 Aligned_cols=22 Identities=23% Similarity=0.315 Sum_probs=18.8
Q ss_pred CCCHHHHHHHHHHHHHcCcccE
Q 028240 138 SVPIEETIGEMKKLVEEGKIKY 159 (211)
Q Consensus 138 ~~~~~~~~~~l~~l~~~G~ir~ 159 (211)
.++-+++++.|++|.++|+|+-
T Consensus 36 gV~kdeV~~~LrrLe~KGLI~l 57 (59)
T 2xvc_A 36 GVEKQEVVKLLEALKNKGLIAV 57 (59)
T ss_dssp CCCHHHHHHHHHHHHHTTSEEE
T ss_pred CCCHHHHHHHHHHHHHCCCeec
Confidence 3556799999999999999973
No 156
>2c4w_A 3-dehydroquinate dehydratase; 3-dehydroquinase, shikimate pathway, aromatic amino acid biosynthesis, lyase, sulphonamide; HET: GAJ; 1.55A {Helicobacter pylori} PDB: 2c57_A* 2xda_A* 1j2y_A* 2wks_A* 2xb9_A* 2c4v_A* 2xd9_A*
Probab=60.53 E-value=30 Score=25.56 Aligned_cols=81 Identities=15% Similarity=0.151 Sum_probs=59.3
Q ss_pred CCChHHHHHHHHHHHh--hcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc---CcccEEEeCCCCHHHHHHHhccCCc
Q 028240 105 KGTPEYVRSCCEASLR--RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPDTIRRAHAVHPI 179 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~--~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~~ 179 (211)
..+.+.|.+.+.+.-+ .+|+ .++++|-. .-.+.++++.+.... |.|--=|--+|+.-.+.+++....+
T Consensus 33 ~~Tl~di~~~l~~~a~~~~~g~-~l~~~QSN------~EGeLId~Ih~a~~~~~dgIIINpgAyTHtSvAlrDAl~~v~~ 105 (176)
T 2c4w_A 33 MVTLDQIHEIMQTFVKQGNLDV-ELEFFQTN------FEGEIIDKIQESVGSEYEGIIINPGAFSHTSIAIADAIMLAGK 105 (176)
T ss_dssp SCCHHHHHHHHHHHHHHTTCCE-EEEEEECS------CHHHHHHHHHHHHSSSCCEEEEECGGGGGTCHHHHHHHHTSSS
T ss_pred cCCHHHHHHHHHHHhccccCCC-EEEEEeeC------cHHHHHHHHHHhccCCeeEEEECcchhccchHHHHHHHHhCCC
Confidence 4578999999999988 9986 36766621 123788888888765 4555556667777788888888777
Q ss_pred eEEeccCCccccC
Q 028240 180 TAVQLEWSLWARD 192 (211)
Q Consensus 180 ~~~q~~~~~~~~~ 192 (211)
-++.++.|-.+.+
T Consensus 106 P~VEVHiSNi~aR 118 (176)
T 2c4w_A 106 PVIEVHLTNIQAR 118 (176)
T ss_dssp CEEEEESSCGGGS
T ss_pred CEEEEEecCcccc
Confidence 7899988866543
No 157
>3k30_A Histamine dehydrogenase; 6-S-cysteinyl-FMN, ADP binding site, oxidoreductase; HET: FMN ADP; 2.70A {Pimelobacter simplex}
Probab=60.04 E-value=61 Score=28.95 Aligned_cols=130 Identities=18% Similarity=0.095 Sum_probs=64.6
Q ss_pred HHHHHHHHHHcCCCeEeC--CCCc------------------CCCcHHH---HHHHHHhc---CCCCcEEEEeccccccC
Q 028240 44 GISIIKHAFSKGITFFDT--ADKY------------------GPYTNEI---LLGKALKE---LPRENIQVATKFGFVEL 97 (211)
Q Consensus 44 ~~~~l~~A~~~Gi~~~Dt--A~~Y------------------g~g~~E~---~lG~~l~~---~~r~~~~i~tK~~~~~~ 97 (211)
..+.-+.|.++|+..+|- |..| | |.-|. ++-+.++. .-.+++.|..|+.+...
T Consensus 158 f~~aA~~a~~aGfDgVeih~a~gy~L~~qFlsp~~N~R~D~yG-Gs~enR~r~~~ei~~avr~~~g~~~~v~~r~s~~~~ 236 (690)
T 3k30_A 158 HRNAVRRSIEAGYDIVYVYGAHGYSGVHHFLSKRYNQRTDEYG-GSLENRMRLLRELLEDTLDECAGRAAVACRITVEEE 236 (690)
T ss_dssp HHHHHHHHHHHTCSEEEEEECTTCSHHHHHHCTTTCCCCSTTS-SSHHHHTHHHHHHHHHHHHHHTTSSEEEEEEECCCC
T ss_pred HHHHHHHHHHcCCCEEEEcccccchHHHHhCCCccCCCccccC-CCHHHHHHHHHHHHHHHHHHhCCCceEEEEECcccc
Confidence 344455677889998775 4444 4 33332 33333332 12356788899876433
Q ss_pred CCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecC--------CCCCCHHHHHHHHHHHHHcCcccEEEeCCC-CHH
Q 028240 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRV--------DTSVPIEETIGEMKKLVEEGKIKYIGLSEA-SPD 168 (211)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~--------~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~ 168 (211)
... ..+.+... .+-+.|+. ++ |++-+|.- ....+....++....+++.=.+--|++..+ +++
T Consensus 237 ~~~----g~~~~~~~-~~~~~l~~-~~---d~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~~~ 307 (690)
T 3k30_A 237 IDG----GITREDIE-GVLRELGE-LP---DLWDFAMGSWEGDSVTSRFAPEGRQEEFVAGLKKLTTKPVVGVGRFTSPD 307 (690)
T ss_dssp STT----SCCHHHHH-HHHHHHTT-SS---SEEEEECSCHHHHTCCTTTCCTTTTHHHHTTSGGGCSSCEEECSCCCCHH
T ss_pred CCC----CCCHHHHH-HHHHHHHh-hc---CEEEEecccccccCCCCccCCccccHHHHHHHHHHcCCeEEEeCCCCCHH
Confidence 221 12333332 23334444 44 55555531 000111112344555555555666777665 467
Q ss_pred HHHHHhccCCceEEe
Q 028240 169 TIRRAHAVHPITAVQ 183 (211)
Q Consensus 169 ~l~~~~~~~~~~~~q 183 (211)
..+++++....+.+.
T Consensus 308 ~a~~~l~~g~~d~v~ 322 (690)
T 3k30_A 308 AMVRQIKAGILDLIG 322 (690)
T ss_dssp HHHHHHHTTSCSEEE
T ss_pred HHHHHHHCCCcceEE
Confidence 777776665444443
No 158
>1kcz_A Beta-methylaspartase; beta zigzag, alpha/beta-barrel, lyase; 1.90A {Clostridium tetanomorphum} SCOP: c.1.11.2 d.54.1.1 PDB: 1kd0_A* 3zvi_A 3zvh_A
Probab=59.78 E-value=49 Score=27.63 Aligned_cols=79 Identities=8% Similarity=-0.053 Sum_probs=53.3
Q ss_pred EeecCCCCCCHHHHHHHHHHHHHc-----Ccc-cEEEeCCCCHHHHHHHhccCCceEEeccCCccccC-chhhHHHHHHH
Q 028240 131 YQHRVDTSVPIEETIGEMKKLVEE-----GKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRF 203 (211)
Q Consensus 131 ~lh~~~~~~~~~~~~~~l~~l~~~-----G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~ 203 (211)
++..|-+.....+.++.+.+|.++ -.+ -+.|=|-++...+.++++....+++|+..+-.-.- ....+...|++
T Consensus 271 ~iEqP~~~~~~~~d~~~~~~l~~~l~~~g~~ipIa~dE~~~~~~~~~~~i~~~a~d~v~ik~~~~GGit~a~~i~~~A~~ 350 (413)
T 1kcz_A 271 RIEGPMDVEDRQKQMEAMRDLRAELDGRGVDAELVADEWCNTVEDVKFFTDNKAGHMVQIKTPDLGGVNNIADAIMYCKA 350 (413)
T ss_dssp EEECSBCCSSHHHHHHHHHHHHHHHHHHTCCEEEEECTTCCSHHHHHHHHHTTCSSEEEECTGGGSSTHHHHHHHHHHHH
T ss_pred EEecCCCCCCCcccHHHHHHHHHhhhcCCCCCcEEeCCCcCCHHHHHHHHHhCCCCEEEeCccccCCHHHHHHHHHHHHH
Confidence 555554322134567777777765 222 24444557889999999888889999987753211 13468999999
Q ss_pred cCCeee
Q 028240 204 VRLAVK 209 (211)
Q Consensus 204 ~gi~v~ 209 (211)
+|+.++
T Consensus 351 ~gi~~~ 356 (413)
T 1kcz_A 351 NGMGAY 356 (413)
T ss_dssp TTCEEE
T ss_pred cCCEEE
Confidence 999876
No 159
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=59.71 E-value=72 Score=26.17 Aligned_cols=142 Identities=16% Similarity=0.177 Sum_probs=75.7
Q ss_pred CCCHHHHHHHH-------HHHHHcCCCeEeCC-------------------CCcCCCcHHH---HHH---HHHhcCCCCc
Q 028240 38 PLSEEDGISII-------KHAFSKGITFFDTA-------------------DKYGPYTNEI---LLG---KALKELPREN 85 (211)
Q Consensus 38 ~~~~~~~~~~l-------~~A~~~Gi~~~DtA-------------------~~Yg~g~~E~---~lG---~~l~~~~r~~ 85 (211)
..+.++..+++ +.|.++|+..++.- +.||. .-|. ++- +++++.-.++
T Consensus 147 ~mt~~eI~~ii~~f~~aA~~a~~aGfDgVEih~a~GyLl~qFlsp~~N~R~D~yGG-slenR~r~~~eiv~aVr~avg~d 225 (363)
T 3l5l_A 147 EMTLDDIARVKQDFVDAARRARDAGFEWIELHFAHGYLGQSFFSEHSNKRTDAYGG-SFDNRSRFLLETLAAVREVWPEN 225 (363)
T ss_dssp ECCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHTTSCTT
T ss_pred cCCHHHHHHHHHHHHHHHHHHHHcCCCEEEEccccchHHHHccCCCcCCCCcccCc-CHHHHHHHHHHHHHHHHHHcCCC
Confidence 34555554444 45668899987732 34552 2332 223 3333322346
Q ss_pred EEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEee-cCCCC--CCHHHHHHHHHHHHHcCcccEEEe
Q 028240 86 IQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTS--VPIEETIGEMKKLVEEGKIKYIGL 162 (211)
Q Consensus 86 ~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~~--~~~~~~~~~l~~l~~~G~ir~iGv 162 (211)
+.|..|+.+....+++ ..+.+.. ..+-+.|+..|++||++-.-. .+... ......++.+..+++.=.+--+++
T Consensus 226 ~pV~vRis~~~~~~~G---~~~~~~~-~~la~~L~~~Gvd~i~vs~g~~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 301 (363)
T 3l5l_A 226 LPLTARFGVLEYDGRD---EQTLEES-IELARRFKAGGLDLLSVSVGFTIPDTNIPWGPAFMGPIAERVRREAKLPVTSA 301 (363)
T ss_dssp SCEEEEEEEECSSSCH---HHHHHHH-HHHHHHHHHTTCCEEEEEECCCSSCCCCCCCTTTTHHHHHHHHHHHTCCEEEC
T ss_pred ceEEEEecchhcCCCC---CCCHHHH-HHHHHHHHHcCCCEEEEecCccccccccCCCcchhHHHHHHHHHHcCCcEEEe
Confidence 6688888764322111 0122222 234556778898888775421 11100 011113444555555445677777
Q ss_pred CCC-CHHHHHHHhccCCceEEec
Q 028240 163 SEA-SPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 163 s~~-~~~~l~~~~~~~~~~~~q~ 184 (211)
... +++..+++++....+.+++
T Consensus 302 GgI~s~e~a~~~l~~G~aD~V~i 324 (363)
T 3l5l_A 302 WGFGTPQLAEAALQANQLDLVSV 324 (363)
T ss_dssp SSTTSHHHHHHHHHTTSCSEEEC
T ss_pred CCCCCHHHHHHHHHCCCccEEEe
Confidence 775 7899999998876777655
No 160
>2ozt_A TLR1174 protein; structural genomics, O-succinylbenzoate synthase, PSI, protein structure initiative; 1.42A {Synechococcus elongatus} PDB: 3h7v_A
Probab=59.66 E-value=68 Score=25.86 Aligned_cols=147 Identities=14% Similarity=0.025 Sum_probs=83.9
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHH--HHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEI--LLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~--~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
+++..+.++.+++.|++.|-.--. ....+. ..=+++++ ++ +++-|..-... .++++...+-++.
T Consensus 117 ~e~~~~~a~~~~~~G~~~~KiKvg--~~~~~~d~~~v~avr~~~g-~~~~L~vDaN~----------~~~~~~A~~~~~~ 183 (332)
T 2ozt_A 117 GQAALEQWQQSWQRGQTTFKWKVG--VMSPEEEQAILKALLAALP-PGAKLRLDANG----------SWDRATANRWFAW 183 (332)
T ss_dssp GGGHHHHHHHHHHTTCCEEEEECS--SSCHHHHHHHHHHHHHHSC-TTCEEEEECTT----------CCCHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCcEEEEEeC--CCChHHHHHHHHHHHHHcC-CCCEEEEcccC----------CCCHHHHHHHHHH
Confidence 355666777788999998654221 111222 22234443 32 22322222111 2255555444433
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCccccCchhh
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIENE 196 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~ 196 (211)
|+.+. -.++.++..|-+..+ ++.+.+|.++-.+ -+.|=|-++...+.++++....+++|+..+.. -+. ..
T Consensus 184 -l~~~~--~~~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dEs~~~~~~~~~~~~~~a~~~i~ik~~~~-GGi-~~ 254 (332)
T 2ozt_A 184 -LDRHG--NGKIEYVEQPLPPDQ----WQALLSLAQTVTTAIALDESVVSAAEVQRWVDRGWPGFFVIKTALF-GDP-DS 254 (332)
T ss_dssp -HHHHC--CTTEEEEECCSCTTC----HHHHHHHHHHCSSCEEESTTCCSHHHHHHHHHTTCCSEEEECHHHH-SCH-HH
T ss_pred -HHhhc--cCCcceeECCCCCCC----HHHHHHHHHhCCCCEEeCCCCCCHHHHHHHHHhCCCCEEEEChhhh-CCH-HH
Confidence 55552 126778888865433 5566666654333 35566668899999998887778888876543 223 37
Q ss_pred HHHHHHHc--CCeee
Q 028240 197 IVPLCRFV--RLAVK 209 (211)
Q Consensus 197 ~~~~~~~~--gi~v~ 209 (211)
+.+.|+++ |+.++
T Consensus 255 i~~~A~~~~~gi~~~ 269 (332)
T 2ozt_A 255 LSLLLRRGLEPQRLV 269 (332)
T ss_dssp HHHHHHTTCCGGGEE
T ss_pred HHHHHHHhCCCCcEE
Confidence 88999999 88764
No 161
>3v3w_A Starvation sensing protein RSPA; enolase, enzyme function initiative, EFI, lyase; HET: NHE; 1.40A {Cellvibrio japonicus} PDB: 3v4b_A* 4f4r_A 3qkf_A* 3qke_A* 3p93_A* 3ow1_A 3pk7_A* 3rgt_A* 3bsm_A
Probab=59.59 E-value=78 Score=26.57 Aligned_cols=150 Identities=11% Similarity=0.044 Sum_probs=87.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC--CC-----CcCC---------------C----------cHHHHHHHHHhcCCCCcEE
Q 028240 40 SEEDGISIIKHAFSKGITFFDT--AD-----KYGP---------------Y----------TNEILLGKALKELPRENIQ 87 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt--A~-----~Yg~---------------g----------~~E~~lG~~l~~~~r~~~~ 87 (211)
++++..+.++.+++.|++.|=. .. .||. + ......=+++++.-.+++-
T Consensus 149 ~~e~~~~~a~~~~~~Gf~~iKlKvG~~~~~~~~g~~~~~~~~~~~~~~~p~~~~~d~~~~~~~d~e~v~avR~avG~d~~ 228 (424)
T 3v3w_A 149 DLDSTLEAVRKAKDKGYKAIRVQCGIPGIAKTYGVSTNTKSYEPADADLPSVEVWSTEKYLNYIPDVFAAVRKEFGPDIH 228 (424)
T ss_dssp SHHHHHHHHHHHHHTTCSEEEEEECCTTCSCCTTCC-----CCSCCBSSCCEEEECHHHHHHHHHHHHHHHHHHHCSSSE
T ss_pred CHHHHHHHHHHHHHcCCCEEEEeccCccccccccccccccccccccccccccccccchhHHHHHHHHHHHHHHHcCCCCc
Confidence 5788888889999999997532 21 1221 1 0011122344432123444
Q ss_pred EEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCC
Q 028240 88 VATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEAS 166 (211)
Q Consensus 88 i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~ 166 (211)
|...... .++.+...+ +-+.|+.++++++ ..|-+.. .++.+.++++.-.+. ..|=+-++
T Consensus 229 l~vDaN~----------~~~~~~A~~-~~~~L~~~~i~~i-----EqP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~ 288 (424)
T 3v3w_A 229 LLHDVHH----------RLTPIEAAR-LGKALEPYHLFWM-----EDAVPAE----NQESFKLIRQHTTTPLAVGEVFNS 288 (424)
T ss_dssp EEEECTT----------CCCHHHHHH-HHHHHGGGCCSEE-----ECCSCCS----STTHHHHHHHHCCSCEEECTTCCS
T ss_pred EEEeCCC----------CCCHHHHHH-HHHHHHhcCCCEE-----ECCCChH----hHHHHHHHHhhCCCCEEEccCcCC
Confidence 4444321 224444333 3345667776554 4554322 345677777664444 33444578
Q ss_pred HHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 167 PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
...++++++....+++|+..+-.-. ..-..+...|+++|+.+.
T Consensus 289 ~~~~~~~i~~ga~d~v~~k~~~~GGit~~~~ia~~A~~~gi~~~ 332 (424)
T 3v3w_A 289 IHDCRELIQNQWIDYIRTTIVHAGGISQMRRIADFASLFHVRTG 332 (424)
T ss_dssp GGGTHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHTTTCEEE
T ss_pred HHHHHHHHHcCCCCeEeecchhcCCHHHHHHHHHHHHHcCCEEE
Confidence 8899999988889999998775321 123468999999999874
No 162
>3mqt_A Mandelate racemase/muconate lactonizing protein; PSI-II, NYSGXRC, muconate lactonizing EN structural genomics, protein structure initiative; 2.10A {Shewanella pealeana}
Probab=59.46 E-value=75 Score=26.32 Aligned_cols=146 Identities=11% Similarity=0.048 Sum_probs=84.0
Q ss_pred HHHHHHHHHHHcCCCeEeCCCCcCC--CcHHH--HHHHHHhcCCCCcEEEEeccccccCCCcccccCC-ChHHHHHHHHH
Q 028240 43 DGISIIKHAFSKGITFFDTADKYGP--YTNEI--LLGKALKELPRENIQVATKFGFVELGFTSVIVKG-TPEYVRSCCEA 117 (211)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~DtA~~Yg~--g~~E~--~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~-s~~~i~~~~~~ 117 (211)
+..+..+.+++.|++.|=.- -.|. ..-+. ..=+++++.-.+++-|...... .+ +.+...+ +-+
T Consensus 155 ~~~~~a~~~~~~G~~~~K~~-k~g~~~~~~~~d~~~v~avR~a~G~d~~l~vDan~----------~~~~~~~A~~-~~~ 222 (394)
T 3mqt_A 155 AYKPLIAKAKERGAKAVKVC-IIPNDKVSDKEIVAYLRELREVIGWDMDMMVDCLY----------RWTDWQKARW-TFR 222 (394)
T ss_dssp HHHHHHHHHHHTTCSEEEEE-CCCCTTSCHHHHHHHHHHHHHHHCSSSEEEEECTT----------CCSCHHHHHH-HHH
T ss_pred HHHHHHHHHHHcCCCEEEec-ccCCCccCHHHHHHHHHHHHHHhCCCCeEEEECCC----------CCCCHHHHHH-HHH
Confidence 45567788889999987651 1110 11222 2234444421234444444321 22 3333332 334
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchh
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 195 (211)
.|+.+|++++ ..|-+.. .++.+.++++.-.+. ..|=+-+++..++++++....+++|+..+-.-. ..-.
T Consensus 223 ~L~~~~i~~i-----EeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~~~ 293 (394)
T 3mqt_A 223 QLEDIDLYFI-----EACLQHD----DLIGHQKLAAAINTRLCGAEMSTTRFEAQEWLEKTGISVVQSDYNRCGGVTELL 293 (394)
T ss_dssp HTGGGCCSEE-----ESCSCTT----CHHHHHHHHHHSSSEEEECTTCCHHHHHHHHHHHHCCSEECCCTTTSSCHHHHH
T ss_pred HHhhcCCeEE-----ECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCeEecCccccCCHHHHH
Confidence 5666666544 5554322 356677787765454 333344778899999988888999998775321 1234
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.+.
T Consensus 294 ~ia~~A~~~gi~~~ 307 (394)
T 3mqt_A 294 RIMDICEHHNAQLM 307 (394)
T ss_dssp HHHHHHHHHTCEEC
T ss_pred HHHHHHHHcCCEEe
Confidence 68999999999875
No 163
>3aty_A Tcoye, prostaglandin F2A synthase; alpha/beta barrel, oxidoreductase, flavin mononucleotide; HET: FMN; 1.70A {Trypanosoma cruzi} PDB: 3atz_A*
Probab=58.96 E-value=77 Score=26.26 Aligned_cols=127 Identities=13% Similarity=0.062 Sum_probs=71.3
Q ss_pred HHHHHHH-HcCCCeEeC--------------------CCCcCCCcHHH---HHHHHHhc----CCCCcEEEEeccccccC
Q 028240 46 SIIKHAF-SKGITFFDT--------------------ADKYGPYTNEI---LLGKALKE----LPRENIQVATKFGFVEL 97 (211)
Q Consensus 46 ~~l~~A~-~~Gi~~~Dt--------------------A~~Yg~g~~E~---~lG~~l~~----~~r~~~~i~tK~~~~~~ 97 (211)
+..+.|. ++|+..++. .+.||.-.-|. ++-+.++. +..+ .|..|+.+...
T Consensus 178 ~AA~~a~~~aGfDgVEih~a~GYLl~QFlsp~~N~R~~D~yGG~slenR~r~~~eiv~aVr~avg~~--~v~vRis~~~~ 255 (379)
T 3aty_A 178 EGAKNAIFKAGFDGVEIHGANGYLLDAFFRESSNKRQSGPYAGTTIDTRCQLIYDVTKSVCDAVGSD--RVGLRISPLNG 255 (379)
T ss_dssp HHHHHHHHTSCCSEEEEEECTTSHHHHHHSTTTCCCCSSTTCTTSHHHHHHHHHHHHHHHHHHHCGG--GEEEEECTTCC
T ss_pred HHHHHHHHhcCCCEEEEcCcCchHHhhccCCCCCccccCCCCccChhhhHHHHHHHHHHHHHhcCCC--eEEEEECcccc
Confidence 4556678 899999883 45576302232 22333322 2223 37778765321
Q ss_pred CCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCC---CCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHh
Q 028240 98 GFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD---TSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (211)
Q Consensus 98 ~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~---~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (211)
.. ......+.+. ...+-+.|+..|+++|++ |... +..+. + +.++++.=.+--|++..++++..++++
T Consensus 256 ~~-~~~~~~~~~~-~~~la~~l~~~Gvd~i~v---~~~~~~~~~~~~----~-~~~ir~~~~iPvi~~G~it~~~a~~~l 325 (379)
T 3aty_A 256 VH-GMIDSNPEAL-TKHLCKKIEPLSLAYLHY---LRGDMVNQQIGD----V-VAWVRGSYSGVKISNLRYDFEEADQQI 325 (379)
T ss_dssp GG-GCCCSCHHHH-HHHHHHHHGGGCCSEEEE---ECSCTTSCCCCC----H-HHHHHTTCCSCEEEESSCCHHHHHHHH
T ss_pred cc-cCCCCCCHHH-HHHHHHHHHHhCCCEEEE---cCCCcCCCCccH----H-HHHHHHHCCCcEEEECCCCHHHHHHHH
Confidence 00 0000112222 334556678889877766 4321 11111 4 566666656777888888999999999
Q ss_pred ccCCceEEec
Q 028240 175 AVHPITAVQL 184 (211)
Q Consensus 175 ~~~~~~~~q~ 184 (211)
+....+.+++
T Consensus 326 ~~g~aD~V~i 335 (379)
T 3aty_A 326 REGKVDAVAF 335 (379)
T ss_dssp HTTSCSEEEE
T ss_pred HcCCCeEEEe
Confidence 8877777765
No 164
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=58.26 E-value=31 Score=27.69 Aligned_cols=84 Identities=12% Similarity=0.133 Sum_probs=56.1
Q ss_pred hcCCCceeEEEee-cCC-----CCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCch
Q 028240 121 RLDVEYIDLYYQH-RVD-----TSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE 194 (211)
Q Consensus 121 ~Lg~~~iDl~~lh-~~~-----~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 194 (211)
.-|.+.||+---- +|. ....++.+...++.+++.+. -|.+-+++++.++++++.+.- +-+..|.. . .
T Consensus 63 ~~GAdIIDIGgeSTrPga~~v~~~eE~~Rv~pvI~~l~~~~v--piSIDT~~~~Va~aAl~aGa~--iINdVsg~-~--d 135 (294)
T 2dqw_A 63 AEGADILDLGAESTRPGAAPVPVEEEKRRLLPVLEAVLSLGV--PVSVDTRKPEVAEEALKLGAH--LLNDVTGL-R--D 135 (294)
T ss_dssp HHTCSEEEEECC-----------CCHHHHHHHHHHHHHTTCS--CEEEECSCHHHHHHHHHHTCS--EEECSSCS-C--C
T ss_pred HCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhCCC--eEEEECCCHHHHHHHHHhCCC--EEEECCCC-C--C
Confidence 3488999997532 232 22334566777777776533 478899999999999987653 33344443 2 3
Q ss_pred hhHHHHHHHcCCeeeeC
Q 028240 195 NEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~a~ 211 (211)
+++++.++++|..|+.+
T Consensus 136 ~~m~~v~a~~~~~vVlm 152 (294)
T 2dqw_A 136 ERMVALAARHGVAAVVM 152 (294)
T ss_dssp HHHHHHHHHHTCEEEEE
T ss_pred hHHHHHHHHhCCCEEEE
Confidence 57999999999999864
No 165
>3fcp_A L-Ala-D/L-Glu epimerase, A muconate lactonizing enzyme; structural genomics, nysgrc,target 9450E, PSI-2; 1.80A {Klebsiella pneumoniae subsp}
Probab=57.64 E-value=79 Score=26.01 Aligned_cols=150 Identities=7% Similarity=-0.041 Sum_probs=80.3
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+-...+++ .|++.|-.--....-..+...=+++++.-.+++-|....... ++.+...+ +-+.
T Consensus 147 ~~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~~----------~~~~~A~~-~~~~ 215 (381)
T 3fcp_A 147 DTAKDIAEGEKLLAEGRHRAFKLKIGARELATDLRHTRAIVEALGDRASIRVDVNQA----------WDAATGAK-GCRE 215 (381)
T ss_dssp CHHHHHHHHHHHTC----CEEEEECCSSCHHHHHHHHHHHHHHTCTTCEEEEECTTC----------BCHHHHHH-HHHH
T ss_pred ChHHHHHHHHHHHHhCCCCEEEEecCCCChHHHHHHHHHHHHHcCCCCeEEEECCCC----------CCHHHHHH-HHHH
Confidence 34554444555565 699987643211100012222344544223344444443221 24443332 2334
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+++. ++..|-+.. -++.+.+|++.-.+ -+.|=|-++...+.++++....+++|+..+-.=. ..-..
T Consensus 216 l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~a~d~v~~k~~~~GGit~~~~ 286 (381)
T 3fcp_A 216 LAAMGVD-----LIEQPVSAH----DNAALVRLSQQIETAILADEAVATAYDGYQLAQQGFTGAYALKIAKAGGPNSVLA 286 (381)
T ss_dssp HHHTTCS-----EEECCBCTT----CHHHHHHHHHHSSSEEEESTTCCSHHHHHHHHHTTCCSEEEECHHHHTSTTHHHH
T ss_pred HhhcCcc-----ceeCCCCcc----cHHHHHHHHHhCCCCEEECCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHH
Confidence 5555544 445664322 36667777765333 3455566889999999988888999997664211 12346
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 287 ia~~A~~~gi~~~ 299 (381)
T 3fcp_A 287 LARVAQAAGIGLY 299 (381)
T ss_dssp HHHHHHHHTCEEE
T ss_pred HHHHHHHcCCcee
Confidence 8899999999875
No 166
>3uj2_A Enolase 1; enzyme function initiative, EFI, lyase; 2.00A {Anaerostipes caccae}
Probab=57.56 E-value=59 Score=27.75 Aligned_cols=127 Identities=12% Similarity=0.045 Sum_probs=76.5
Q ss_pred HHHHHhcC---CCCcEEEEeccccc-cCC--Ccccc-----cCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHH
Q 028240 74 LGKALKEL---PRENIQVATKFGFV-ELG--FTSVI-----VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE 142 (211)
Q Consensus 74 lG~~l~~~---~r~~~~i~tK~~~~-~~~--~~~~~-----~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~ 142 (211)
+-+++++. +.+++.|..-.... .+. .+.+. ..++++...+-+++.|+.+ +++++..|-+..+
T Consensus 246 i~~AIr~agy~~G~dv~l~vD~aase~~~~~~g~Y~l~~~~~~~t~~eai~~~~~lle~y-----~i~~IEdPl~~dD-- 318 (449)
T 3uj2_A 246 ILEAVKLAGYEPGRDFVLAMDAASSEWKGEKKGEYILPKCKRKFASEELVAHWKSLCERY-----PIVSIEDGLDEED-- 318 (449)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGCBCSSTTEEECTTTCCEEEHHHHHHHHHHHHHHS-----CEEEEESCSCTTC--
T ss_pred HHHHHHHhccccCCceEEEEEcchhhhccccCceeeccCcccccCHHHHHHHHHHHHHhc-----CceEEECCCCcch--
Confidence 34677664 45677777665321 000 01110 1235566666666666654 4788888865443
Q ss_pred HHHHHHHHHHHc-C-cccEEEeCCC--CHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 143 ETIGEMKKLVEE-G-KIKYIGLSEA--SPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 143 ~~~~~l~~l~~~-G-~ir~iGvs~~--~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
|+.+.+|.+. | .|.-.|=-.+ ++..+.++++....+++|+..+-.-. ....++...|+++|+.++
T Consensus 319 --~eg~~~L~~~~~~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~~iGGiTea~kia~lA~~~Gi~~~ 388 (449)
T 3uj2_A 319 --WEGWQYMTRELGDKIQLVGDDLFVTNTERLNKGIKERCGNSILIKLNQIGTVSETLEAIKMAHKAGYTAV 388 (449)
T ss_dssp --HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEE
T ss_pred --HHHHHHHHHHhCCCceEECCcceeCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCeEE
Confidence 5555556554 3 4544443333 69999999998888999998774221 123468999999999955
No 167
>3dxi_A Putative aldolase; TIM barrel, 11107N, PSI2, NYSGXRC, structural genomics, protein structure initiative; 2.04A {Bacteroides vulgatus atcc 8482}
Probab=57.49 E-value=68 Score=25.98 Aligned_cols=104 Identities=9% Similarity=0.138 Sum_probs=56.9
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCC--HH-HHHHHHHHHHHcCcccEEEeC---CCCHHHHHHHhc--cC
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVP--IE-ETIGEMKKLVEEGKIKYIGLS---EASPDTIRRAHA--VH 177 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~--~~-~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~--~~ 177 (211)
++.+. +..+-+.|.++|+++|.+-..-.|....+ +. ..|+.|+.+++...++.-.+. |..++.+..+.. ..
T Consensus 21 ~~~~~-k~~ia~~L~~aGv~~IEvg~~~~p~~~f~~~~~~~~~e~l~~i~~~~~~~~~~L~r~~~~~~~dv~~~~~a~~~ 99 (320)
T 3dxi_A 21 FNSKI-VDAYILAMNELPIDYLEVGYRNKPSKEYMGKFGYTPVSVLKHLRNISTKKIAIMLNEKNTTPEDLNHLLLPIIG 99 (320)
T ss_dssp CCHHH-HHHHHHHHHTTTCCEEEEEECCSCCSSCCCHHHHCCHHHHHHHHHHCCSEEEEEEEGGGCCGGGHHHHHGGGTT
T ss_pred CCHHH-HHHHHHHHHHhCCCEEEEecccCCccccccccccChHHHHHHHhhccCCeEEEEecCCCCChhhHHHHHHhhhc
Confidence 34444 34555677889999999988765543211 00 115555655554555655553 222334444321 14
Q ss_pred CceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 178 PITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 178 ~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
.++.+.+..++-+-..-.+.+++++++|+.|..
T Consensus 100 Gvd~~ri~~~~~nle~~~~~v~~ak~~G~~v~~ 132 (320)
T 3dxi_A 100 LVDMIRIAIDPQNIDRAIVLAKAIKTMGFEVGF 132 (320)
T ss_dssp TCSEEEEEECGGGHHHHHHHHHHHHTTTCEEEE
T ss_pred CCCEEEEEecHHHHHHHHHHHHHHHHCCCEEEE
Confidence 555555544433222224577889999988753
No 168
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=57.12 E-value=45 Score=27.19 Aligned_cols=95 Identities=6% Similarity=0.123 Sum_probs=59.4
Q ss_pred HHHHHHHHHhhcCCCceeEEEe-ecCCC-CCCHHHHHHHHHHHHHcCcccEEEeC-----CCCHHHHHHHhccC---Cce
Q 028240 111 VRSCCEASLRRLDVEYIDLYYQ-HRVDT-SVPIEETIGEMKKLVEEGKIKYIGLS-----EASPDTIRRAHAVH---PIT 180 (211)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~l-h~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs-----~~~~~~l~~~~~~~---~~~ 180 (211)
+.+..++..+..|.|.||+-.- -+|+. ..+.++..+.++.+++.-.+ -|.+- +++++.++++++.+ +..
T Consensus 82 ~~~~A~~~v~~~GAdiIDIg~eStrP~~~~vs~ee~~~~V~~v~~~~~v-PlsIDg~~~~T~~~eV~eaAleagag~~~l 160 (323)
T 4djd_D 82 PGRWAQKCVAEYGADLIYLKLDGADPEGANHSVDQCVATVKEVLQAVGV-PLVVVGCGDVEKDHEVLEAVAEAAAGENLL 160 (323)
T ss_dssp HHHHHHHHHHTTCCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCCS-CEEEECCSCHHHHHHHHHHHHHHTTTSCCE
T ss_pred HHHHHHHHHHHcCCCEEEEcCccCCCCCCCCCHHHHHHHHHHHHhhCCc-eEEEECCCCCCCCHHHHHHHHHhcCCCCCe
Confidence 3333333337889999998543 34432 24566777777777765221 35555 67788999988765 234
Q ss_pred EEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 181 AVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 181 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
++-+... + .+.+++.|+++|..|+++
T Consensus 161 INsv~~~---~--~~~m~~laa~~g~~vVlm 186 (323)
T 4djd_D 161 LGNAEQE---N--YKSLTAACMVHKHNIIAR 186 (323)
T ss_dssp EEEEBTT---B--CHHHHHHHHHHTCEEEEE
T ss_pred EEECCcc---c--HHHHHHHHHHhCCeEEEE
Confidence 4432221 1 247899999999999874
No 169
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=56.50 E-value=46 Score=26.91 Aligned_cols=93 Identities=9% Similarity=0.004 Sum_probs=60.9
Q ss_pred HHHHHHHHHhhcCCCceeEEEe-ecCCC-CCCHHHHHHHHHHHHHc-CcccEEEe-CC----CCHHHHHHHhccCC---c
Q 028240 111 VRSCCEASLRRLDVEYIDLYYQ-HRVDT-SVPIEETIGEMKKLVEE-GKIKYIGL-SE----ASPDTIRRAHAVHP---I 179 (211)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~l-h~~~~-~~~~~~~~~~l~~l~~~-G~ir~iGv-s~----~~~~~l~~~~~~~~---~ 179 (211)
+.+..++.. ..|.|.||+-.- -.|+. ..+.++.++.++.+++. +.. |.+ -+ ++++.++++++.+. +
T Consensus 76 ~~~~A~~~v-~~GAdiIDIg~~StrP~~~~vs~eee~~vV~~v~~~~~vp--lsI~DT~~~~~~~~V~eaal~aga~~k~ 152 (310)
T 2h9a_B 76 PVAWAKKCV-EYGADIVALRLVSAHPDGQNRSGAELAEVCKAVADAIDVP--LMIIGCGVEEKDAEIFPVIGEALSGRNC 152 (310)
T ss_dssp HHHHHHHHH-HTTCSEEEEECGGGCTTTTCCCHHHHHHHHHHHHHHCSSC--EEEECCSCHHHHHHHHHHHHHHTTTSCC
T ss_pred HHHHHHHHH-HcCCcEEEEeCccCCCCCCCCCHHHHHHHHHHHHHhCCce--EEEECCCCCCCCHHHHHHHHHhCCCCCC
Confidence 333444444 889999999774 23432 25677777788888876 443 455 55 78899999887643 2
Q ss_pred eEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 180 TAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 180 ~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
-++-+ +.. + .+++++.|+++|..|+++
T Consensus 153 iINdv--s~~-~--~~~~~~~aa~~g~~vv~m 179 (310)
T 2h9a_B 153 LLSSA--TKD-N--YKPIVATCMVHGHSVVAS 179 (310)
T ss_dssp EEEEE--CTT-T--HHHHHHHHHHHTCEEEEE
T ss_pred EEEEC--CCC-c--cHHHHHHHHHhCCCEEEE
Confidence 23322 322 1 357999999999999864
No 170
>1h05_A 3-dehydroquinate dehydratase; shikimate pathway, alpha/beta protein, lyase, aromatic amino acid biosynthesis; 1.5A {Mycobacterium tuberculosis} SCOP: c.23.13.1 PDB: 1h0r_A* 1h0s_A* 2dhq_A 2xb8_A* 2y71_A* 2y76_A* 2y77_A* 3n76_A* 3n7a_A* 3n86_A* 3n87_A* 3n8n_A*
Probab=56.29 E-value=40 Score=24.09 Aligned_cols=79 Identities=13% Similarity=0.032 Sum_probs=59.2
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH--cCcccEEEeCCCCHHHHHHHhccCCceEEe
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE--EGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~--~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q 183 (211)
.+.+.|.+.+++.-+.+|+ .++++|-. .-.+.++++.+..+ +|.|--=|--+++.-.+.+++....+-++.
T Consensus 27 ~tl~di~~~l~~~a~~~g~-~~~~~QSN------~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~v~~P~VE 99 (146)
T 1h05_A 27 TTHDELVALIEREAAELGL-KAVVRQSD------SEAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLIE 99 (146)
T ss_dssp CCHHHHHHHHHHHHHHTTC-EEEEEECS------CHHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHHTCCSCEEE
T ss_pred CCHHHHHHHHHHHHHHcCC-EEEEEeeC------CHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhCCCCEEE
Confidence 4789999999999999997 47777621 12367777777765 366666677787778888888887777888
Q ss_pred ccCCcccc
Q 028240 184 LEWSLWAR 191 (211)
Q Consensus 184 ~~~~~~~~ 191 (211)
++.|-.+.
T Consensus 100 VHiSNi~a 107 (146)
T 1h05_A 100 VHISNVHA 107 (146)
T ss_dssp EESSCGGG
T ss_pred EEecCccc
Confidence 88886654
No 171
>3ngj_A Deoxyribose-phosphate aldolase; lyase, structural genomics, structural genomics center for infectious disease, ssgcid; 1.70A {Entamoeba histolytica}
Probab=55.27 E-value=9.9 Score=29.71 Aligned_cols=28 Identities=18% Similarity=0.521 Sum_probs=24.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP 67 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~ 67 (211)
++++...+.+.|.++|..|+.|+-.|+.
T Consensus 155 t~eei~~a~~ia~~aGADfVKTSTGf~~ 182 (239)
T 3ngj_A 155 TNEEKVEVCKRCVAAGAEYVKTSTGFGT 182 (239)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHHCcCEEECCCCCCC
Confidence 5678889999999999999999988864
No 172
>3ekg_A Mandelate racemase/muconate lactonizing enzyme; structural genomics, nysgrc, L-rhamnonate dehydratase,target PSI-2; HET: TLA; 1.60A {Azotobacter vinelandii avop} PDB: 2oz3_A*
Probab=55.10 E-value=42 Score=28.16 Aligned_cols=65 Identities=14% Similarity=-0.044 Sum_probs=47.5
Q ss_pred HHHHHHHHHcCcc---cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 145 IGEMKKLVEEGKI---KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 145 ~~~l~~l~~~G~i---r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
++.+.+|+++-.+ -+.|=+-++...+.++++....+++|+..+-.-- .....+...|+++|+.+.
T Consensus 250 ~~~~a~l~~~~~~pi~Ia~gE~~~~~~~~~~li~~~a~dii~~d~~~~GGitea~kia~lA~a~gv~v~ 318 (404)
T 3ekg_A 250 YWGYAELRRNAPTGMMVTTGEHEATRWGFRMLLEMGCCDIIQPDVGWCGGVTELLKISALADAHNALVV 318 (404)
T ss_dssp HHHHHHHHHHSCTTCEEEECTTCCHHHHHHHHHHTTCCSEECCCTTTTTHHHHHHHHHHHHHHTTCEEC
T ss_pred HHHHHHHHHhcCCCeEEEecCccCCHHHHHHHHHcCCCCeEecChhhcCCccHHHHHHHHHHHcCCEEE
Confidence 5667777776443 2556667888899999988889999998775321 113468999999999874
No 173
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=54.99 E-value=65 Score=24.20 Aligned_cols=144 Identities=14% Similarity=0.067 Sum_probs=77.0
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHH------H
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS------C 114 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~------~ 114 (211)
+|.....++.|++.|...+++-=.- .++...|...=.... .+...+.+.+.+++ .
T Consensus 21 PENTl~Af~~A~~~G~d~iE~DV~l----------------T~Dg~lVv~HD~~l~---~g~v~~~t~~eL~~l~~~ipt 81 (224)
T 1vd6_A 21 KENTLESFRLALEAGLDGVELDVWP----------------TRDGVFAVRHDPDTP---LGPVFQVDYADLKAQEPDLPR 81 (224)
T ss_dssp CTTSHHHHHHHHHTTCSEEEEEEEE----------------CTTSCEEECSCSEET---TEEGGGSCHHHHHHHSTTCCB
T ss_pred CcchHHHHHHHHHcCCCEEEEEeeE----------------ecCCcEEEECCCccC---CCChhhCCHHHHHhcCCCCCC
Confidence 4667788999999999988754221 122222222211100 12234567777764 4
Q ss_pred HHHHHhhcC-CCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCC---------------
Q 028240 115 CEASLRRLD-VEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHP--------------- 178 (211)
Q Consensus 115 ~~~sL~~Lg-~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~--------------- 178 (211)
+++.|+.+. -..+- +.+.--.......+..+.+.++.++ -..+=++.|+++.+..+.+..+
T Consensus 82 L~evl~~~~~~~~~~-l~iEiK~~~~~~~~~~~~v~~~l~~--~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~ 158 (224)
T 1vd6_A 82 LEEVLALKEAFPQAV-FNVELKSFPGLGEEAARRLAALLRG--REGVWVSSFDPLALLALRKAAPGLPLGFLMAEDHSAL 158 (224)
T ss_dssp HHHHHGGGGTCTTCE-EEEEECCCTTSHHHHHHHHHHHTTT--CSSEEEEESCHHHHHHHHHHCTTSCEEEEESSCCGGG
T ss_pred HHHHHHhhhccCCce-EEEEECCCCCccHHHHHHHHHHHhc--CCcEEEEeCCHHHHHHHHHHCCCCCEEEEeccccHHH
Confidence 888888775 22221 2232222222222344444455444 4456688899888776654311
Q ss_pred -----ceEEeccCCccccCchhhHHHHHHHcCCeeee
Q 028240 179 -----ITAVQLEWSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 179 -----~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
++.+..++.. ...++++.|++.|+.|..
T Consensus 159 ~~~~~~~~i~~~~~~----~~~~~v~~~~~~G~~v~~ 191 (224)
T 1vd6_A 159 LPCLGVEAVHPHHAL----VTEEAVAGWRKRGLFVVA 191 (224)
T ss_dssp GGGSCCSEEEEBGGG----CCHHHHHHHHHTTCEEEE
T ss_pred HHHcCCcEEecCccc----CCHHHHHHHHHCCCEEEE
Confidence 1112222222 235689999999998763
No 174
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=54.43 E-value=66 Score=26.63 Aligned_cols=26 Identities=12% Similarity=0.321 Sum_probs=22.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 38 PLSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
..+.++-.++.+...+.|+..|+...
T Consensus 30 ~~~~~~Kl~ia~~L~~~Gv~~IE~g~ 55 (370)
T 3rmj_A 30 AMTKEEKIRVARQLEKLGVDIIEAGF 55 (370)
T ss_dssp CCCHHHHHHHHHHHHHHTCSEEEEEE
T ss_pred CcCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 35778889999999999999999864
No 175
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=54.25 E-value=82 Score=25.19 Aligned_cols=97 Identities=12% Similarity=0.087 Sum_probs=59.8
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEee-cCCC-CCCHH----HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCce
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQH-RVDT-SVPIE----ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~-~~~~~----~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (211)
+.+.+.+..++ +-.-|.+.||+---- +|.. ..+.+ .+...++.+++.+. -|.+-+++++.++++++.+..-
T Consensus 44 ~~~~a~~~a~~-~v~~GAdiIDIGgeSTrPga~~v~~~eE~~Rv~pvi~~l~~~~v--piSIDT~~~~Va~aAl~aGa~i 120 (294)
T 2y5s_A 44 ARDDALRRAER-MIAEGADLLDIGGESTRPGAPPVPLDEELARVIPLVEALRPLNV--PLSIDTYKPAVMRAALAAGADL 120 (294)
T ss_dssp CTTHHHHHHHH-HHHTTCSEEEEESSCCSTTCCCCCHHHHHHHHHHHHHHHGGGCS--CEEEECCCHHHHHHHHHHTCSE
T ss_pred CHHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHhhCCC--eEEEECCCHHHHHHHHHcCCCE
Confidence 34444444433 334588999996532 2321 13333 34555555555432 4788899999999999886533
Q ss_pred EEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 181 AVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 181 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+ +..|... .+++++.++++|..|+.+
T Consensus 121 I--NdVsg~~---d~~m~~~~a~~~~~vVlm 146 (294)
T 2y5s_A 121 I--NDIWGFR---QPGAIDAVRDGNSGLCAM 146 (294)
T ss_dssp E--EETTTTC---STTHHHHHSSSSCEEEEE
T ss_pred E--EECCCCC---chHHHHHHHHhCCCEEEE
Confidence 3 3334433 347999999999999864
No 176
>1wa3_A 2-keto-3-deoxy-6-phosphogluconate aldolase; KDPG, pyruvate, lyase; 1.9A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1vlw_A
Probab=54.10 E-value=39 Score=24.87 Aligned_cols=89 Identities=16% Similarity=0.103 Sum_probs=49.4
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC-CCHHHHHHHhccCCceEEecc
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~~~~~~q~~ 185 (211)
+.+...+-++ .+..-|.+. +-+|...+ ...+.++.+++.. +.-..||+++ .++++++++.+.. .+++ +.
T Consensus 20 ~~~~~~~~~~-~~~~~G~~~---iev~~~~~--~~~~~i~~ir~~~--~~~~~ig~~~v~~~~~~~~a~~~G-ad~i-v~ 89 (205)
T 1wa3_A 20 SVEEAKEKAL-AVFEGGVHL---IEITFTVP--DADTVIKELSFLK--EKGAIIGAGTVTSVEQCRKAVESG-AEFI-VS 89 (205)
T ss_dssp SHHHHHHHHH-HHHHTTCCE---EEEETTST--THHHHHHHTHHHH--HTTCEEEEESCCSHHHHHHHHHHT-CSEE-EC
T ss_pred CHHHHHHHHH-HHHHCCCCE---EEEeCCCh--hHHHHHHHHHHHC--CCCcEEEecccCCHHHHHHHHHcC-CCEE-Ec
Confidence 4455444443 344556554 45565432 2233444444433 2224688844 7888888877643 3444 22
Q ss_pred CCccccCchhhHHHHHHHcCCeeee
Q 028240 186 WSLWARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~gi~v~a 210 (211)
.+ ...++++.|+++|+.+++
T Consensus 90 ~~-----~~~~~~~~~~~~g~~vi~ 109 (205)
T 1wa3_A 90 PH-----LDEEISQFCKEKGVFYMP 109 (205)
T ss_dssp SS-----CCHHHHHHHHHHTCEEEC
T ss_pred CC-----CCHHHHHHHHHcCCcEEC
Confidence 22 124689999999998863
No 177
>3dgb_A Muconate cycloisomerase; muconate lactonizing enzyme, muconolactone binding, isomeras structural genomics, PSI-2; HET: MUC; 1.70A {Pseudomonas fluorescens} PDB: 3ct2_A* 3fj4_A* 1muc_A 1bkh_A 3muc_A 2muc_A 1f9c_A
Probab=53.70 E-value=93 Score=25.62 Aligned_cols=149 Identities=7% Similarity=-0.020 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHH-cCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 41 EEDGISIIKHAFS-KGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 41 ~~~~~~~l~~A~~-~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
.++..+-...+++ .|++.|-.--....-..+...=+++++.-.+++.|...... .++.+...+ +-+.|
T Consensus 149 ~~~~~~~~~~~~~~~G~~~~KiKvg~~~~~~d~~~v~avR~a~g~~~~l~vDaN~----------~~~~~~A~~-~~~~l 217 (382)
T 3dgb_A 149 TAKDIAEAQKMLDLRRHRIFKLKIGAGEVDRDLAHVIAIKKALGDSASVRVDVNQ----------AWDEAVALR-ACRIL 217 (382)
T ss_dssp HHHHHHHHHHHHHTTSCSEEEEECCSSCHHHHHHHHHHHHHHHGGGSEEEEECTT----------CBCHHHHHH-HHHHH
T ss_pred hHHHHHHHHHHHHhCCCCEEEEeeCCCCHHHHHHHHHHHHHHcCCCCeEEEeCCC----------CCCHHHHHH-HHHHH
Confidence 4444444556666 69998764321110001222224444311233344433321 124443322 23455
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhH
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEI 197 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~ 197 (211)
+.+++.+ +..|-+.. -++.+.++++.-.+ -+.|=|-++...+.++++....+++|+..+-.=. ..-..+
T Consensus 218 ~~~~i~~-----iEqP~~~~----d~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i 288 (382)
T 3dgb_A 218 GGNGIDL-----IEQPISRN----NRAGMVRLNASSPAPIMADESIECVEDAFNLAREGAASVFALKIAKNGGPRATLRT 288 (382)
T ss_dssp HTTTCCC-----EECCBCTT----CHHHHHHHHHHCSSCEEESTTCSSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHHH
T ss_pred hhcCcCe-----eeCCCCcc----CHHHHHHHHHhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEecccccCCHHHHHHH
Confidence 5566544 45553322 36667777775333 3556566889999999988888999987664211 113468
Q ss_pred HHHHHHcCCeee
Q 028240 198 VPLCRFVRLAVK 209 (211)
Q Consensus 198 ~~~~~~~gi~v~ 209 (211)
...|+++|+.+.
T Consensus 289 ~~~A~~~gi~~~ 300 (382)
T 3dgb_A 289 AAIAEAAGIGLY 300 (382)
T ss_dssp HHHHHHHTCEEE
T ss_pred HHHHHHcCCeEe
Confidence 899999999875
No 178
>2vp8_A Dihydropteroate synthase 2; RV1207 transferase, folate biosynthesis, antibiotic resistance; 2.64A {Mycobacterium tuberculosis}
Probab=53.57 E-value=33 Score=27.92 Aligned_cols=96 Identities=8% Similarity=-0.032 Sum_probs=56.5
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEee-cCCCCCCHHH----HHHHHHHHHHc--CcccEEEeCCCCHHHHHHHhccCCce
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQH-RVDTSVPIEE----TIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~~~~~~~----~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~ 180 (211)
.+.+.+..++ +-.-|.+.||+---- +|....+.++ +...++.+++. +. -|.+-+++++.++++++.+.-
T Consensus 64 ~~~a~~~A~~-~v~~GAdIIDIGgeSTrPG~~v~~~eEl~Rv~pvI~~l~~~~~~v--pISIDT~~~~VaeaAl~aGa~- 139 (318)
T 2vp8_A 64 DAAARDAVHR-AVADGADVIDVGGVKAGPGERVDVDTEITRLVPFIEWLRGAYPDQ--LISVDTWRAQVAKAACAAGAD- 139 (318)
T ss_dssp CHHHHHHHHH-HHHTTCSEEEEC----------CHHHHHHHHHHHHHHHHHHSTTC--EEEEECSCHHHHHHHHHHTCC-
T ss_pred HHHHHHHHHH-HHHCCCCEEEECCCcCCCCCCCCHHHHHHHHHHHHHHHHhhCCCC--eEEEeCCCHHHHHHHHHhCCC-
Confidence 3444444332 233488999996432 2332233333 34445666654 32 588899999999999987543
Q ss_pred EEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 181 AVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 181 ~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+-+..+... .+++++.++++|..|+.|
T Consensus 140 -iINDVsg~~---d~~m~~vaa~~g~~vVlm 166 (318)
T 2vp8_A 140 -LINDTWGGV---DPAMPEVAAEFGAGLVCA 166 (318)
T ss_dssp -EEEETTSSS---STTHHHHHHHHTCEEEEE
T ss_pred -EEEECCCCC---chHHHHHHHHhCCCEEEE
Confidence 223444432 357999999999999864
No 179
>3kru_A NADH:flavin oxidoreductase/NADH oxidase; homotetramer, dimer of dimers, TIM barrel, thermophilic, OLD enzyme; HET: FMN; 1.60A {Thermoanaerobacter pseudethanolicus AT} SCOP: c.1.4.0 PDB: 3krz_A*
Probab=52.91 E-value=93 Score=25.38 Aligned_cols=137 Identities=16% Similarity=0.092 Sum_probs=72.2
Q ss_pred CCHHHHHHHH-------HHHHHcCCCeEeCC-------------------CCcCCCcHHH---HHH---HHHhcCCCCcE
Q 028240 39 LSEEDGISII-------KHAFSKGITFFDTA-------------------DKYGPYTNEI---LLG---KALKELPRENI 86 (211)
Q Consensus 39 ~~~~~~~~~l-------~~A~~~Gi~~~DtA-------------------~~Yg~g~~E~---~lG---~~l~~~~r~~~ 86 (211)
.+.++..+++ +.|.++|+..+|-- +.||. .-|. ++- +++++.-.+++
T Consensus 133 mt~~eI~~ii~~f~~AA~~a~~aGfDgVEih~ahGYLl~qFlsp~~N~R~D~yGG-slenR~rf~~eiv~aVr~avg~d~ 211 (343)
T 3kru_A 133 LSVEEIKSIVKAFGEAAKRANLAGYDVVEIHAAHGYLIHEFLSPLSNKRKDEYGN-SIENRARFLIEVIDEVRKNWPENK 211 (343)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTCSEEEEEECTTSHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHTSCTTS
T ss_pred cCHHHHHHHHHHHHHHHhhccccCCceEEEecccchhHHHhhcccccccchhhcc-chHhHHHHHHHHHHHHHhcCCccC
Confidence 4555544444 45668899987742 45553 2232 222 33333234566
Q ss_pred EEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCC--CC--CCHHHHHHHHHHHHHcCcccEEEe
Q 028240 87 QVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVD--TS--VPIEETIGEMKKLVEEGKIKYIGL 162 (211)
Q Consensus 87 ~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~--~~--~~~~~~~~~l~~l~~~G~ir~iGv 162 (211)
-|..|+.+....++ ..+.+...+ +-+.|+.. +|+|++- |... .. ......++...++++.=.+--+++
T Consensus 212 pv~vRls~~~~~~~----g~~~~~~~~-~a~~l~~~-vd~i~vs--~g~~~~~~~~~~~~~~~~~~~~ir~~~~iPVi~~ 283 (343)
T 3kru_A 212 PIFVRVSADDYMEG----GINIDMMVE-YINMIKDK-VDLIDVS--SGGLLNVDINLYPGYQVKYAETIKKRCNIKTSAV 283 (343)
T ss_dssp CEEEEEECCCSSTT----SCCHHHHHH-HHHHHTTT-CSEEEEE--CCCSSCCCCCCCTTTTHHHHHHHHHHHTCEEEEE
T ss_pred CeEEEeechhhhcc----CccHHHHHH-HHHHhhcc-ccEEecc--CCceEeeeecccCceeehHHHHHHHhcCccccee
Confidence 77788876432221 123333332 33444555 6666653 2110 00 011123455556665545677777
Q ss_pred CCC-CHHHHHHHhccCCceEEec
Q 028240 163 SEA-SPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 163 s~~-~~~~l~~~~~~~~~~~~q~ 184 (211)
... +++..+++++....+.+.+
T Consensus 284 Ggi~t~e~Ae~~l~~G~aD~V~i 306 (343)
T 3kru_A 284 GLITTQELAEEILSNERADLVAL 306 (343)
T ss_dssp SSCCCHHHHHHHHHTTSCSEEEE
T ss_pred eeeeHHHHHHHHHhchhhHHHHH
Confidence 774 6899999988776666654
No 180
>2fym_A Enolase; RNA degradosome, enolase, lyase; 1.60A {Escherichia coli} SCOP: c.1.11.1 d.54.1.1 PDB: 1e9i_A 3h8a_A
Probab=52.43 E-value=1e+02 Score=25.83 Aligned_cols=94 Identities=6% Similarity=-0.040 Sum_probs=60.1
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-C-ccc-EEEe-CCCCHHHHHHHhccCCceEE
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIK-YIGL-SEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir-~iGv-s~~~~~~l~~~~~~~~~~~~ 182 (211)
+++...+-+++..++ .+++++..|-+..+ |+.+.+|.++ | .+. ..|= +.++...+.++++....+++
T Consensus 268 t~~~ai~~~~~L~~~-----~~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dEl~~~~~~~~~~~i~~~a~d~i 338 (431)
T 2fym_A 268 TSEEFTHFLEELTKQ-----YPIVSIEDGLDESD----WDGFAYQTKVLGDKIQLVGDDLFVTNTKILKEGIEKGIANSI 338 (431)
T ss_dssp CHHHHHHHHHHHHHH-----SCEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEE
T ss_pred CHHHHHHHHHHHHHh-----CCceEEECCCCccc----HHHHHHHHHHhCCCCeEEeCCcccCCHHHHHHHHHhCCCCEE
Confidence 555544444443332 36788888865444 4555555554 2 333 2222 55789999999998888999
Q ss_pred eccCCccccC-chhhHHHHHHHcCCeee
Q 028240 183 QLEWSLWARD-IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 183 q~~~~~~~~~-~~~~~~~~~~~~gi~v~ 209 (211)
|+..+-.-.- ....+...|+++|+.++
T Consensus 339 ~ik~~~~GGite~~~i~~~A~~~g~~~~ 366 (431)
T 2fym_A 339 LIKFNQIGSLTETLAAIKMAKDAGYTAV 366 (431)
T ss_dssp EECGGGTCSHHHHHHHHHHHHHTTCEEE
T ss_pred EECccccCCHHHHHHHHHHHHHCCCeEE
Confidence 9987743211 12468999999999874
No 181
>2vef_A Dihydropteroate synthase; antibiotic resistance, transferase, folate biosynthesis; 1.8A {Streptococcus pneumoniae} PDB: 2veg_A*
Probab=51.34 E-value=95 Score=25.05 Aligned_cols=95 Identities=12% Similarity=0.090 Sum_probs=57.7
Q ss_pred HHHHHHHHHh--hcCCCceeEEEee-cCCCC-----CCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhccCCceE
Q 028240 111 VRSCCEASLR--RLDVEYIDLYYQH-RVDTS-----VPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAVHPITA 181 (211)
Q Consensus 111 i~~~~~~sL~--~Lg~~~iDl~~lh-~~~~~-----~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~~~~~~ 181 (211)
....++..++ .-|.+.||+---- +|... ..++.+...++.+++. +. -|.|-+++++.++++++.+..-+
T Consensus 32 ~~~a~~~a~~~v~~GAdIIDIGgeSTrPGa~~v~~~eE~~Rv~pvI~~l~~~~~v--piSIDT~~~~Va~aAl~aGa~iI 109 (314)
T 2vef_A 32 LEQALQQARKLIAEGASMLDIGGESTRPGSSYVEIEEEIQRVVPVIKAIRKESDV--LISIDTWKSQVAEAALAAGADLV 109 (314)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEECCC-----CHHHHHHHHHHHHHHHHHHHHHCCC--EEEEECSCHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHHCCCCEEEECCCcCCCCCCCCCHHHHHHHHHHHHHHHHhhCCc--eEEEeCCCHHHHHHHHHcCCCEE
Confidence 3444444433 3488999986532 23211 1122345555666655 32 58889999999999998865333
Q ss_pred EeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 182 VQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 182 ~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+..+.... ..++++.++++|..|+.|
T Consensus 110 --NDVsg~~~--d~~m~~v~a~~~~~vvlm 135 (314)
T 2vef_A 110 --NDITGLMG--DEKMPHVVAEARAQVVIM 135 (314)
T ss_dssp --EETTTTCS--CTTHHHHHHHHTCEEEEE
T ss_pred --EECCCCCC--ChHHHHHHHHcCCCEEEE
Confidence 33444332 247999999999998764
No 182
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=51.10 E-value=54 Score=27.16 Aligned_cols=93 Identities=14% Similarity=0.060 Sum_probs=58.3
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEeccC
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~ 186 (211)
+.+...+++.+ |.+-|.|.+++ -.|+ ++..+++..++++=.+--++=-.|++..+.++++.+---+--++=
T Consensus 44 D~~atv~Qi~~-l~~aG~diVRv---avp~-----~~~a~al~~I~~~~~vPlvaDiHf~~~lal~a~e~G~dklRINPG 114 (366)
T 3noy_A 44 DVEATLNQIKR-LYEAGCEIVRV---AVPH-----KEDVEALEEIVKKSPMPVIADIHFAPSYAFLSMEKGVHGIRINPG 114 (366)
T ss_dssp CHHHHHHHHHH-HHHTTCCEEEE---ECCS-----HHHHHHHHHHHHHCSSCEEEECCSCHHHHHHHHHTTCSEEEECHH
T ss_pred CHHHHHHHHHH-HHHcCCCEEEe---CCCC-----hHHHHHHHHHHhcCCCCEEEeCCCCHHHHHHHHHhCCCeEEECCc
Confidence 34444444433 45678888887 2232 466799999998866666665579998888877752111222333
Q ss_pred CccccCchhhHHHHHHHcCCee
Q 028240 187 SLWARDIENEIVPLCRFVRLAV 208 (211)
Q Consensus 187 ~~~~~~~~~~~~~~~~~~gi~v 208 (211)
|+-....-+++++.|+++|+.+
T Consensus 115 Nig~~~~~~~vv~~ak~~~~pi 136 (366)
T 3noy_A 115 NIGKEEIVREIVEEAKRRGVAV 136 (366)
T ss_dssp HHSCHHHHHHHHHHHHHHTCEE
T ss_pred ccCchhHHHHHHHHHHHcCCCE
Confidence 3333222257999999999976
No 183
>2pa6_A Enolase; glycolysis, lyase, magnesium, metal-binding, structural GENO NPPSFA; 1.85A {Methanocaldococcus jannaschii}
Probab=50.48 E-value=1.1e+02 Score=25.66 Aligned_cols=94 Identities=11% Similarity=-0.001 Sum_probs=61.1
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccE-EEeC-CCCHHHHHHHhccCCceEEec
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKY-IGLS-EASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~-iGvs-~~~~~~l~~~~~~~~~~~~q~ 184 (211)
+++...+-+.+.|+.+ +++++..|-+..+ ++.+.+|.++-.+.= .|=+ ..+...+.++++....+++|+
T Consensus 268 ~~~~ai~~~~~~l~~~-----~i~~iEeP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~i~i 338 (427)
T 2pa6_A 268 TREELLDYYKALVDEY-----PIVSIEDPFHEED----FEGFAMITKELDIQIVGDDLFVTNVERLRKGIEMKAANALLL 338 (427)
T ss_dssp CHHHHHHHHHHHHHHS-----CEEEEECCSCTTC----HHHHHHHHHHSSSEEEESTTTTTCHHHHHHHHHHTCCSEEEE
T ss_pred CHHHHHHHHHHHHhhC-----CCcEEEcCCChhh----HHHHHHHHhhCCCeEEeCccccCCHHHHHHHHHhCCCCEEEE
Confidence 5555555555566654 5678888865433 566677776644432 2222 235899999998888899999
Q ss_pred cCCcccc-CchhhHHHHHHHcCCeee
Q 028240 185 EWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 185 ~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
..+-.-. .....+...|+++|+.++
T Consensus 339 k~~~~GGitea~~ia~lA~~~g~~~~ 364 (427)
T 2pa6_A 339 KVNQIGTLSEAVDAAQLAFRNGYGVV 364 (427)
T ss_dssp CHHHHCSHHHHHHHHHHHHTTTCEEE
T ss_pred cccccCCHHHHHHHHHHHHHcCCeEE
Confidence 7764211 113468999999999874
No 184
>3tcs_A Racemase, putative; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, TIM barrel; HET: PG4; 1.88A {Roseobacter denitrificans} PDB: 3u4f_A 3t9p_A 3t8q_A
Probab=50.33 E-value=1.1e+02 Score=25.37 Aligned_cols=148 Identities=14% Similarity=0.127 Sum_probs=83.7
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCC--cC------CCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADK--YG------PYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVR 112 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~--Yg------~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~ 112 (211)
++.+.++.+...+.|++.|-.--. .+ .+...+.+ +++++.-..++-|...... .++.+...
T Consensus 148 ~~~~~~~~~~~~~~Gf~~~K~KvG~~~~~d~~~~~~~~~~~v-~avReavG~d~~l~vDaN~----------~~~~~~A~ 216 (388)
T 3tcs_A 148 RDEAERLKRLRDTQGFTAFKVRAGAEVGRNRDEWPGRTEEII-PTMRRELGDDVDLLIDANS----------CYTPDRAI 216 (388)
T ss_dssp HHHHHHHHHHHHHHCCCEEEEECSCTTCTTCCSSTTHHHHHH-HHHHHHHCSSSEEEEECTT----------CCCHHHHH
T ss_pred HHHHHHHHHHHHhcCCCEEEEccCCCcccccccchhHHHHHH-HHHHHHhCCCCeEEEeCCC----------CcCHHHHH
Confidence 344555555556899998754221 11 11122333 3444421234445444432 12444433
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR 191 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~ 191 (211)
+ +-+.|+.+++. ++..|-+.. -++.+.++++.-.+. +.|=+-++...+.++++....+++|+..+-.-.
T Consensus 217 ~-~~~~l~~~~i~-----~iEeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~~a~d~v~~d~~~~GG 286 (388)
T 3tcs_A 217 E-VGHMLQDHGFC-----HFEEPCPYW----ELAQTKQVTDALDIDVTGGEQDCDLPTWQRMIDMRAVDIVQPDILYLGG 286 (388)
T ss_dssp H-HHHHHHHTTCC-----EEECCSCTT----CHHHHHHHHHHCSSCEEECTTCCCHHHHHHHHHHTCCSEECCCHHHHTS
T ss_pred H-HHHHHhhcCCe-----EEECCCCcc----CHHHHHHHHHhcCCCEEcCCccCCHHHHHHHHHcCCCCEEEeCccccCC
Confidence 2 23455666654 445664332 356667777653343 555566889999999988888999987654211
Q ss_pred -CchhhHHHHHHHcCCeee
Q 028240 192 -DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 192 -~~~~~~~~~~~~~gi~v~ 209 (211)
..-..+...|+.+|+.+.
T Consensus 287 it~a~kia~~A~~~gv~~~ 305 (388)
T 3tcs_A 287 ICRTLRVVEMARAAGLPVT 305 (388)
T ss_dssp HHHHHHHHHHHHHTTCCBC
T ss_pred HHHHHHHHHHHHHcCCEEE
Confidence 113468999999999874
No 185
>3ktc_A Xylose isomerase; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 1.54A {Pectobacterium atrosepticum SCRI1043}
Probab=48.63 E-value=9.2 Score=30.83 Aligned_cols=60 Identities=17% Similarity=0.197 Sum_probs=38.9
Q ss_pred cccceeccccCCCCCCCCC-----CHHHHHHHHHHHHHc-CCCeEeCCCCcCCCcHHHHHHHHHhc
Q 028240 21 VSKLGYGCMSLSGCYNSPL-----SEEDGISIIKHAFSK-GITFFDTADKYGPYTNEILLGKALKE 80 (211)
Q Consensus 21 vs~lg~G~~~~~~~~~~~~-----~~~~~~~~l~~A~~~-Gi~~~DtA~~Yg~g~~E~~lG~~l~~ 80 (211)
-|++|+|+|.|+..++.-. ++....+.++.+-+. |++.++....+.....-+.+.+.+++
T Consensus 7 ~~~~~~~~w~~~~~~~~f~~~g~~~~~~~~e~l~~aa~~~G~~~VEl~~~~~~~~~~~~l~~~l~~ 72 (333)
T 3ktc_A 7 YPEFGAGLWHFANYIDRYAVDGYGPALSTIDQINAAKEVGELSYVDLPYPFTPGVTLSEVKDALKD 72 (333)
T ss_dssp CCCEEEEGGGGSCCCCSSSTTCSSCCCCHHHHHHHHHHHSSEEEEEEEESCSTTCCHHHHHHHHHH
T ss_pred CCcceeeeeeeecccccccCCCCCCCCCHHHHHHHHHHhCCCCEEEecCCCcchhHHHHHHHHHHH
Confidence 3577899998886553311 223446778999999 99999986444322244566677765
No 186
>1pii_A N-(5'phosphoribosyl)anthranilate isomerase; bifunctional(isomerase and synthase); 2.00A {Escherichia coli} SCOP: c.1.2.4 c.1.2.4 PDB: 1jcm_P* 2kzh_A
Probab=48.49 E-value=40 Score=28.84 Aligned_cols=64 Identities=17% Similarity=0.244 Sum_probs=43.7
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC-CCCHHHHHHHhccCCceEEeccCC
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS-EASPDTIRRAHAVHPITAVQLEWS 187 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs-~~~~~~l~~~~~~~~~~~~q~~~~ 187 (211)
..+|.||+=+.+........+.+.+-+ +.+.-.+..+||- |-+.+.+.+..+...++.+|++-+
T Consensus 272 ~~~Gad~iGfIf~~~SpR~V~~~~a~~----i~~~~~v~~VgVFvn~~~~~i~~~~~~~~ld~vQLHG~ 336 (452)
T 1pii_A 272 YDAGAIYGGLIFVATSPRCVNVEQAQE----VMAAAPLQYVGVFRNHDIADVVDKAKVLSLAAVQLHGN 336 (452)
T ss_dssp HHHTCSEEEEECCTTCTTBCCHHHHHH----HHHHCCCEEEEEESSCCHHHHHHHHHHHTCSEEEECSC
T ss_pred HhcCCCEEEeecCCCCCCCCCHHHHHH----HHhcCCCCEEEEEeCCCHHHHHHHHHhcCCCEEEECCC
Confidence 467889988886422222344443333 2223579999987 568889999998889999999753
No 187
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=48.07 E-value=56 Score=24.23 Aligned_cols=65 Identities=8% Similarity=0.098 Sum_probs=42.7
Q ss_pred CHHHHHHHHHHHHHc-CcccEEEeCCC--CHHHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeee
Q 028240 140 PIEETIGEMKKLVEE-GKIKYIGLSEA--SPDTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 140 ~~~~~~~~l~~l~~~-G~ir~iGvs~~--~~~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~ 209 (211)
..-+++++|.++++. ++|--+|..|. ..+.+.+++. .++.+..|+- ...-...+..+++.|+.++
T Consensus 79 s~~Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~---~~i~~~~~~~--~~e~~~~i~~l~~~G~~vv 146 (196)
T 2q5c_A 79 TRFDTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLG---VKIKEFLFSS--EDEITTLISKVKTENIKIV 146 (196)
T ss_dssp CHHHHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHT---CEEEEEEECS--GGGHHHHHHHHHHTTCCEE
T ss_pred CHhHHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhC---CceEEEEeCC--HHHHHHHHHHHHHCCCeEE
Confidence 345789999999876 56777777774 4556666655 3455544442 2223468888888888765
No 188
>3dip_A Enolase; structural genomics, isomerase, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics, NYSGXRC, lyase; HET: SIC; 2.50A {Unidentified}
Probab=47.74 E-value=1.2e+02 Score=25.22 Aligned_cols=84 Identities=13% Similarity=0.116 Sum_probs=56.5
Q ss_pred HHHhhcCCCceeEEEeecC-CCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cc
Q 028240 117 ASLRRLDVEYIDLYYQHRV-DTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DI 193 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~-~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~ 193 (211)
+.|+.+++++|+ .| -+.. .++.+.+++++-.+. +.|=|-++..+++++++....+++|+..+-.-- ..
T Consensus 234 ~~L~~~~i~~iE-----qP~~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~~~d~v~~k~~~~GGit~ 304 (410)
T 3dip_A 234 NALADYGVLWVE-----DPIAKMD----NIPAVADLRRQTRAPICGGENLAGTRRFHEMLCADAIDFVMLDLTWCGGLSE 304 (410)
T ss_dssp HHGGGGTCSEEE-----CCBSCTT----CHHHHHHHHHHHCCCEEECTTCCSHHHHHHHHHTTCCSEEEECTTTSSCHHH
T ss_pred HHHHhcCCCEEE-----CCCCCcc----cHHHHHHHHhhCCCCEEecCCcCCHHHHHHHHHcCCCCeEeecccccCCHHH
Confidence 456666665544 55 3322 255666666653333 445556889999999998889999998876421 12
Q ss_pred hhhHHHHHHHcCCeee
Q 028240 194 ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 194 ~~~~~~~~~~~gi~v~ 209 (211)
-..+...|+++|+.+.
T Consensus 305 ~~~ia~~A~~~gi~~~ 320 (410)
T 3dip_A 305 GRKIAALAETHARPLA 320 (410)
T ss_dssp HHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHcCCEEe
Confidence 3468999999999884
No 189
>1gqo_A Dehydroquinase; dehydratase, lyase; 2.10A {Bacillus subtilis} SCOP: c.23.13.1
Probab=47.34 E-value=35 Score=24.32 Aligned_cols=81 Identities=14% Similarity=0.111 Sum_probs=57.4
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--CcccEEEeCCCCHHHHHHHhccCCceEE
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~ 182 (211)
..+.+.+.+.+++.-+.+|+ .++++|-. .-.+.++++.+..+. |.|--=|--+++.-.+.+++....+-++
T Consensus 24 ~~tl~di~~~l~~~a~~~g~-~~~~~QSN------~EgeLid~Ih~a~~~~dgiiiNpgA~THtSvAlrDAl~~v~~P~V 96 (143)
T 1gqo_A 24 RQTLTDIETDLFQFAEALHI-QLTFFQSN------HEGDLIDAIHEAEEQYSGIVLNPGALSHYSYAIRDAVSSISLPVV 96 (143)
T ss_dssp SCCHHHHHHHHHHHHHHHTC-EEEEEECS------CHHHHHHHHHHHTTTCSEEEEECGGGGGTCHHHHHHHHTSCSCEE
T ss_pred cCCHHHHHHHHHHHHHHcCC-EEEEEeeC------CHHHHHHHHHHhhhcCcEEEEccchhccccHHHHHHHHhCCCCEE
Confidence 34788999999999999997 47777621 123677887777542 3444446666777788888888777788
Q ss_pred eccCCccccC
Q 028240 183 QLEWSLWARD 192 (211)
Q Consensus 183 q~~~~~~~~~ 192 (211)
.++.|-.+.+
T Consensus 97 EVHiSNi~aR 106 (143)
T 1gqo_A 97 EVHLSNLYAR 106 (143)
T ss_dssp EEESSCGGGS
T ss_pred EEEecCcccc
Confidence 8888866543
No 190
>1chr_A Chloromuconate cycloisomerase; 3.00A {Ralstonia eutropha} PDB: 2chr_A
Probab=46.43 E-value=1.2e+02 Score=24.75 Aligned_cols=77 Identities=6% Similarity=0.042 Sum_probs=53.2
Q ss_pred EEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCC
Q 028240 129 LYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRL 206 (211)
Q Consensus 129 l~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi 206 (211)
+.++..|-+.. .++.+.+++++-.+. ..|=+-++..+++++++....+++|+..+-.-. ..-..+...|+++|+
T Consensus 216 i~~iEqP~~~~----~~~~~~~l~~~~~iPia~dE~~~~~~~~~~~~~~~~~d~v~~k~~~~GGit~~~~i~~~A~~~g~ 291 (370)
T 1chr_A 216 VELIEQPVGRE----NTQALRRLSDNNRVAIMADESLSTLASAFDLARDRSVDVFSLKLCNMGGVSATQKIAAVAEASGI 291 (370)
T ss_dssp EEEEECCSCTT----CHHHHHHHHHHSCSEEEESSSCCSHHHHHHHHTTTSCSEEEECTTTSCSHHHHHHHHHHHHHHTC
T ss_pred CCEEECCCCcc----cHHHHHHHHhhCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCC
Confidence 45556664432 356677777764443 444456889999999998889999998775321 123468999999999
Q ss_pred eee
Q 028240 207 AVK 209 (211)
Q Consensus 207 ~v~ 209 (211)
.+.
T Consensus 292 ~~~ 294 (370)
T 1chr_A 292 ASY 294 (370)
T ss_dssp EEE
T ss_pred eEE
Confidence 875
No 191
>3tqp_A Enolase; energy metabolism, lyase; 2.20A {Coxiella burnetii}
Probab=46.19 E-value=1.3e+02 Score=25.30 Aligned_cols=127 Identities=15% Similarity=0.098 Sum_probs=77.5
Q ss_pred HHHHHhcC---CCCcEEEEeccccccC-CCccc---ccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHH
Q 028240 74 LGKALKEL---PRENIQVATKFGFVEL-GFTSV---IVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIG 146 (211)
Q Consensus 74 lG~~l~~~---~r~~~~i~tK~~~~~~-~~~~~---~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~ 146 (211)
+-+++++. +.+++.|..-+....- ..+.+ ...++++...+-+++.++.++ ++++..|-+..+ |+
T Consensus 224 i~~Air~agy~~G~dv~l~vD~aase~~~~g~Y~l~~~~~t~~eai~~~~~ll~~y~-----i~~IEdPl~~dD----~e 294 (428)
T 3tqp_A 224 ILEAIEDANYVPGKDIYLALDAASSELYQNGRYDFENNQLTSEEMIDRLTEWTKKYP-----VISIEDGLSEND----WA 294 (428)
T ss_dssp HHHHHHHTTCCBTTTBEEEEECCGGGSEETTEECCSSSCBCHHHHHHHHHHHHHHSC-----EEEEECCSCTTC----HH
T ss_pred HHHHHHHhhcccCCceEEEEecchhhhccCCceeccccccCHHHHHHHHHHHHhhcc-----cceEeCCCCccc----HH
Confidence 35677764 5567777665521100 00110 013467777777776676654 678888865443 45
Q ss_pred HHHHHHHc-C-cccEEEeC--CCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 147 EMKKLVEE-G-KIKYIGLS--EASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 147 ~l~~l~~~-G-~ir~iGvs--~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
.+.+|.++ + .|.-+|=- ..+++.+.++++....+++|+..+-.=. .....+...|+++|+.++
T Consensus 295 g~~~L~~~~~~pI~ivGDel~vt~~~~~~~~i~~~a~d~i~iKv~~iGGiTealkia~lA~~~G~~~~ 362 (428)
T 3tqp_A 295 GWKLLTERLENKVQLVGDDIFVTNPDILEKGIKKNIANAILVKLNQIGTLTETLATVGLAKSNKYGVI 362 (428)
T ss_dssp HHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHTTCCSEEEECHHHHCCHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhcCCCcceeccccccCCHHHHHHHHHhCCCCEEEecccccCCHHHHHHHHHHHHHcCCeEE
Confidence 55555544 2 34444532 3489999999998888899988774221 123468999999999954
No 192
>1wue_A Mandelate racemase/muconate lactonizing enzyme FA protein; structural genomics, unknown function, nysgxrc target T2185; 2.10A {Enterococcus faecalis} SCOP: c.1.11.2 d.54.1.1
Probab=46.05 E-value=1.2e+02 Score=24.82 Aligned_cols=144 Identities=14% Similarity=0.045 Sum_probs=82.8
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhc-CCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKE-LPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~-~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
+.++..+.++.+++.|++.|=.-- |.....+.+ +++++ ++.-++.+-.... ++.+.. + +-+.
T Consensus 161 ~~~~~~~~a~~~~~~G~~~~KiKv--g~~~d~~~v-~avr~a~~~~~l~vDaN~~------------~~~~~a-~-~~~~ 223 (386)
T 1wue_A 161 DLPQLLKQVQLAVEKGYQRVKLKI--RPGYDVEPV-ALIRQHFPNLPLMVDANSA------------YTLADL-P-QLQR 223 (386)
T ss_dssp CHHHHHHHHHHHHHTTCSCEEEEC--BTTBSHHHH-HHHHHHCTTSCEEEECTTC------------CCGGGH-H-HHHG
T ss_pred CHHHHHHHHHHHHHhhhheEEEee--CcHHHHHHH-HHHHHhCCCCeEEEeCCCC------------CCHHHH-H-HHHH
Confidence 467777777888899999864211 112233334 44443 4222233322211 244443 2 2233
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchhh
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENE 196 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~ 196 (211)
|+.+ ++.++..|-+..+ ++.+.+|.++-.+ -+.|=|-++...+.++++....+++|+..+-.-. .....
T Consensus 224 l~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit~~~~ 294 (386)
T 1wue_A 224 LDHY-----QLAMIEQPFAADD----FLDHAQLQRELKTRICLDENIRSLKDCQVALALGSCRSINLKIPRVGGIHEALK 294 (386)
T ss_dssp GGGS-----CCSCEECCSCTTC----SHHHHHHHTTCSSCEEECTTCCSHHHHHHHHHHTCCSEEEECHHHHTSHHHHHH
T ss_pred HHhC-----CCeEEeCCCCccc----HHHHHHHHHhcCCCEEeCCccCCHHHHHHHHHcCCCCEEEEchhhhCCHHHHHH
Confidence 4443 5556667754432 5566666655333 2445556789999999988888999987764211 11246
Q ss_pred HHHHHHHcCCeee
Q 028240 197 IVPLCRFVRLAVK 209 (211)
Q Consensus 197 ~~~~~~~~gi~v~ 209 (211)
+...|+++|+.+.
T Consensus 295 i~~~A~~~gi~~~ 307 (386)
T 1wue_A 295 IAAFCQENDLLVW 307 (386)
T ss_dssp HHHHHHHTTCEEE
T ss_pred HHHHHHHCCCeEE
Confidence 8999999999875
No 193
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=45.92 E-value=1.2e+02 Score=24.57 Aligned_cols=98 Identities=7% Similarity=0.034 Sum_probs=60.3
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEe-ecCCCC-----CCHH----HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQ-HRVDTS-----VPIE----ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV 176 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~l-h~~~~~-----~~~~----~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~ 176 (211)
+.+.+.+..++.+ .=|.+.||+--- -+|... .+.+ .+...++.+++.-. --|.+-+++++.++++++.
T Consensus 47 ~~~~al~~A~~~v-~~GAdIIDIGgeSTrPga~~~~~~V~~~eE~~Rv~pvI~~l~~~~~-vpISIDT~~~~Va~aAl~a 124 (314)
T 3tr9_A 47 DLNSALRTAEKMV-DEGADILDIGGEATNPFVDIKTDSPSTQIELDRLLPVIDAIKKRFP-QLISVDTSRPRVMREAVNT 124 (314)
T ss_dssp SHHHHHHHHHHHH-HTTCSEEEEECCCSCTTC-----CHHHHHHHHHHHHHHHHHHHHCC-SEEEEECSCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCCCCCcccccCCCCHHHHHHHHHHHHHHHHhhCC-CeEEEeCCCHHHHHHHHHc
Confidence 4455544444433 348899999743 233321 1112 24555666666411 2588999999999999987
Q ss_pred CCceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 177 HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 177 ~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+.. +-+..|... .+++++.++++|++|+.+
T Consensus 125 Ga~--iINDVsg~~---~~~m~~v~a~~g~~vVlM 154 (314)
T 3tr9_A 125 GAD--MINDQRALQ---LDDALTTVSALKTPVCLM 154 (314)
T ss_dssp TCC--EEEETTTTC---STTHHHHHHHHTCCEEEE
T ss_pred CCC--EEEECCCCC---chHHHHHHHHhCCeEEEE
Confidence 643 333444433 237999999999998863
No 194
>3n8k_A 3-dehydroquinate dehydratase; shikimate pathway, lyase, aromatic amino acid biosynthesis, drug target, citrazinic acid, S genomics; HET: D1X; 2.25A {Mycobacterium tuberculosis} PDB: 3n59_A*
Probab=45.65 E-value=85 Score=23.02 Aligned_cols=80 Identities=13% Similarity=0.038 Sum_probs=56.8
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH--cCcccEEEeCCCCHHHHHHHhccCCceEE
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE--EGKIKYIGLSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~--~G~ir~iGvs~~~~~~l~~~~~~~~~~~~ 182 (211)
..+.+.|.+.+++.-.++|++ ++++|-.. -.+.++++.+..+ +|.|--=|--++..-.+.+++....+-++
T Consensus 52 ~~TL~dI~~~l~~~a~~~G~~-l~~~QSN~------EGeLId~Ih~A~~~~dgIIINPgAyTHtSvAlrDAL~~v~~P~V 124 (172)
T 3n8k_A 52 GTTHDELVALIEREAAELGLK-AVVRQSDS------EAQLLDWIHQAADAAEPVILNAGGLTHTSVALRDACAELSAPLI 124 (172)
T ss_dssp SCCHHHHHHHHHHHHHHTTCE-EEEEECSC------HHHHHHHHHHHHHHTCCEEEECGGGGGTCHHHHHHHTTCCSCEE
T ss_pred CCCHHHHHHHHHHHHHHcCCE-EEEEecCC------HHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHhCCCCEE
Confidence 347889999999999999974 67766321 2356777776654 45666666667766778888877777788
Q ss_pred eccCCcccc
Q 028240 183 QLEWSLWAR 191 (211)
Q Consensus 183 q~~~~~~~~ 191 (211)
.+..+-...
T Consensus 125 EVHiSNiha 133 (172)
T 3n8k_A 125 EVHISNVHA 133 (172)
T ss_dssp EEESSCTTS
T ss_pred EEEcCCchh
Confidence 888876554
No 195
>3v5c_A Mandelate racemase/muconate lactonizing protein; enolase fold, galacturonate dehydratase, double Mg site, LYA; 1.53A {Paenibacillus SP} PDB: 3v5f_A* 3p3b_A* 3ops_A* 3n4f_A* 3qpe_A*
Probab=45.53 E-value=56 Score=27.15 Aligned_cols=75 Identities=12% Similarity=0.024 Sum_probs=51.7
Q ss_pred eeEEEeecCCCCCCHHHHHHHHHHHHH------cCcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccCch--hhHH
Q 028240 127 IDLYYQHRVDTSVPIEETIGEMKKLVE------EGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARDIE--NEIV 198 (211)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~------~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~~~--~~~~ 198 (211)
.+++++..|-+ .+ ++.+.+|++ .+.--+.|=+-+ ...+.++++....+++|+..+- -+.. ..+.
T Consensus 227 ~~l~~iEeP~~-~d----~~~~~~l~~~~~~~~~~ipIa~gE~~~-~~~~~~li~~~a~dii~~d~~~--GGitea~kia 298 (392)
T 3v5c_A 227 VNLYWLEAAFH-ED----EALYEDLKEWLGQRGQNVLIADGEGLA-SPHLIEWATRGRVDVLQYDIIW--PGFTHWMELG 298 (392)
T ss_dssp SCCCEEECSSS-CC----HHHHHHHHHHHHHHTCCCEEEECCSSC-CTTHHHHHHTTSCCEECCBTTT--BCHHHHHHHH
T ss_pred CCCeEEeCCCC-cC----HHHHHHHHHhhccCCCCCcEECCCccc-HHHHHHHHHcCCCcEEEeCCCC--CCHHHHHHHH
Confidence 46778888865 23 334444544 244445666667 6778888888889999999874 3432 4688
Q ss_pred HHHHHcCCeee
Q 028240 199 PLCRFVRLAVK 209 (211)
Q Consensus 199 ~~~~~~gi~v~ 209 (211)
..|+++|+.+.
T Consensus 299 ~~A~~~gv~~~ 309 (392)
T 3v5c_A 299 EKLDAHGLRSA 309 (392)
T ss_dssp HHHHHTTCEEC
T ss_pred HHHHHcCCeEE
Confidence 99999999874
No 196
>2xsa_A Ogoga, hyaluronoglucosaminidase; O-GLCNACYLATION, O-GLCNACASE, glycosyl hydrolase, hydrolase; 2.00A {Oceanicola granulosus} PDB: 2xsb_A*
Probab=45.09 E-value=65 Score=27.52 Aligned_cols=99 Identities=10% Similarity=0.220 Sum_probs=60.4
Q ss_pred CCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHH
Q 028240 34 CYNSPLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRS 113 (211)
Q Consensus 34 ~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~ 113 (211)
-||.+.+.++-.++++..-+.|.|.+ .|++ .++.+...|+.-. ++.+.+ +
T Consensus 9 FYG~PWS~e~R~~l~~f~g~~kmNtY----iYAP---------------KDDpyhr~~WRe~----------Yp~eel-~ 58 (447)
T 2xsa_A 9 FYGRDWRRDERATVMDWIAAAGMNTY----IYGP---------------KDDVHVRARWRVP----------YDAAGL-A 58 (447)
T ss_dssp CSSSCCCHHHHHHHHHHHHHTTCCEE----EECC---------------TTCTTTTTTTTSC----------CCHHHH-H
T ss_pred cCCCCCCHHHHHHHHHHHHHcCCceE----EEcc---------------CCChHHHHhhccc----------CCHHHH-H
Confidence 35666788999999999999999987 6763 3333333333221 233333 2
Q ss_pred HHHHHHhhcCCCceeEEEeecCCCC------CCHHHHHHHHHHHHHcCcccEEEeC
Q 028240 114 CCEASLRRLDVEYIDLYYQHRVDTS------VPIEETIGEMKKLVEEGKIKYIGLS 163 (211)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~------~~~~~~~~~l~~l~~~G~ir~iGvs 163 (211)
.+.+.-+.=.-..+++++-=.|... .++..+.+.++++.+.| ||.++|.
T Consensus 59 ~l~eLv~~a~~~~V~Fv~aisPG~di~~s~~~d~~~L~~K~~ql~~lG-Vr~FaIl 113 (447)
T 2xsa_A 59 RLTELRDAAAARGMVFYVSLAPCLDVTYSDPQDRAALLARVDQLARAG-LRNLVLL 113 (447)
T ss_dssp HHHHHHHHHHTTTCEEEEEECCCSSCCTTCHHHHHHHHHHHHHHHHTT-CCEEEEE
T ss_pred HHHHHHHHHHHcCCEEEEEeCCCcccCCCCHHHHHHHHHHHHHHHHhC-CCEEEEe
Confidence 4555444444556677665555222 12446677788888876 5777775
No 197
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=44.71 E-value=92 Score=23.54 Aligned_cols=79 Identities=14% Similarity=0.073 Sum_probs=43.9
Q ss_pred EEEeecCCCCCCHHHHHHH-HHHHHHcCcccEEEeCCCCHHHHHHHhccC--CceEEeccCCccc---cCchhhHHHHHH
Q 028240 129 LYYQHRVDTSVPIEETIGE-MKKLVEEGKIKYIGLSEASPDTIRRAHAVH--PITAVQLEWSLWA---RDIENEIVPLCR 202 (211)
Q Consensus 129 l~~lh~~~~~~~~~~~~~~-l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~--~~~~~q~~~~~~~---~~~~~~~~~~~~ 202 (211)
++++..|.... -+++++. .+++++. -|++|=|.+.+-+...++.+.. ++.++-..+..-. ....++..+..+
T Consensus 25 i~YF~~~G~eN-T~~tl~la~era~e~-~Ik~iVVASssG~TA~k~~e~~~~~lVvVTh~~GF~~pg~~e~~~e~~~~L~ 102 (206)
T 1t57_A 25 ICYFEEPGKEN-TERVLELVGERADQL-GIRNFVVASVSGETALRLSEMVEGNIVSVTHHAGFREKGQLELEDEARDALL 102 (206)
T ss_dssp EEEESSCSGGG-HHHHHHHHHHHHHHH-TCCEEEEECSSSHHHHHHHTTCCSEEEEECCCTTSSSTTCCSSCHHHHHHHH
T ss_pred EEEecCCCccc-HHHHHHHHHHHHHHc-CCCEEEEEeCCCHHHHHHHHHccCCEEEEeCcCCCCCCCCCcCCHHHHHHHH
Confidence 45555554322 3445554 4444444 4888888777655555555533 4444433333222 223567888889
Q ss_pred HcCCeee
Q 028240 203 FVRLAVK 209 (211)
Q Consensus 203 ~~gi~v~ 209 (211)
+.|+.|+
T Consensus 103 ~~G~~V~ 109 (206)
T 1t57_A 103 ERGVNVY 109 (206)
T ss_dssp HHTCEEE
T ss_pred hCCCEEE
Confidence 9988875
No 198
>3otr_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel, TIM barrel; 2.75A {Toxoplasma gondii}
Probab=43.25 E-value=1.6e+02 Score=25.21 Aligned_cols=95 Identities=15% Similarity=0.106 Sum_probs=63.6
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-C-cccEEE--eCCCCHHHHHHHhccCCceE
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIKYIG--LSEASPDTIRRAHAVHPITA 181 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir~iG--vs~~~~~~l~~~~~~~~~~~ 181 (211)
.+++.+.+-.++.+++.+ ++++..|-+..++ +.+.+|.++ | +|.-+| ++..++..+.++++....++
T Consensus 281 ~t~~Elid~y~~lle~yp-----Iv~IEDPl~~dD~----eg~a~Lt~~lg~~iqIvGDDl~vTn~~~i~~~Ie~~a~n~ 351 (452)
T 3otr_A 281 LTGEKLKEVYEGWLKKYP-----IISVEDPFDQDDF----ASFSAFTKDVGEKTQVIGDDILVTNILRIEKALKDKACNC 351 (452)
T ss_dssp ECHHHHHHHHHHHHHHSC-----EEEEECCSCTTCH----HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred ccHHHHHHHHHHHHhhhC-----ceEEecCCChhhH----HHHHHHHHhhCCCeEEEeCccccCCHHHHHHHHhcCCCCE
Confidence 477888877777777654 7888888665543 333344333 2 465566 33457999999998877788
Q ss_pred EeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 182 VQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 182 ~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+++..|=.-. ...-++...|+++|+.++
T Consensus 352 IlIKvnQIGgITEalka~~lA~~~G~~vm 380 (452)
T 3otr_A 352 LLLKVNQIGSVTEAIEACLLAQKSGWGVQ 380 (452)
T ss_dssp EEECHHHHCCHHHHHHHHHHHHHTTCEEE
T ss_pred EEeeccccccHHHHHHHHHHHHHcCCeEE
Confidence 8877663211 123468899999999875
No 199
>1q7z_A 5-methyltetrahydrofolate S-homocysteine methyltransferase; methionine, cobalamin, vitamin B12; 1.70A {Thermotoga maritima} SCOP: c.1.21.2 c.1.26.1 PDB: 1q7q_A 1q7m_A 1q85_A 1q8a_A 1q8j_A* 3bof_A 3bol_A
Probab=42.77 E-value=85 Score=27.61 Aligned_cols=161 Identities=12% Similarity=0.045 Sum_probs=84.5
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-cHHHHHHHHHhcCC-CC----c-EEEEeccccccCCCc---ccccCC---
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TNEILLGKALKELP-RE----N-IQVATKFGFVELGFT---SVIVKG--- 106 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~~E~~lG~~l~~~~-r~----~-~~i~tK~~~~~~~~~---~~~~~~--- 106 (211)
++++..+.++...+.|++.+=- ..|-+ +.-+.+.++++..+ |. . -.+++-......... +...+.
T Consensus 250 ~p~~~a~~~~~~~~~G~~iiGG--CCGTtP~hI~aia~~~~~~~p~~~~~~~~~~~~s~~~~~~~~~~~iiGer~N~Tg~ 327 (566)
T 1q7z_A 250 KPHDFAVHIDSYYELGVNIFGG--CCGTTPEHVKLFRKVLGNRKPLQRKKKRIFAVSSPSKLVTFDHFVVIGERINPAGR 327 (566)
T ss_dssp CHHHHHTTHHHHHHTTCSEECC--CTTCCHHHHHHHHHHHCSCCCCCCCCCCCCEEECSSCEEESSSCEEEEEEECCTTC
T ss_pred CHHHHHHHHHHHHHcCCcEEcc--ccCCCHHHHHHHHHHhcCCCCCCcccCccceecCCceeeccccceEEEEEecCCCC
Confidence 5677888889999999998841 11211 02234666676532 21 1 122221110000000 000111
Q ss_pred ----------ChHHHHHHHHHHHhhcCCCceeEEEeecCCCC-CC-HHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHh
Q 028240 107 ----------TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTS-VP-IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (211)
Q Consensus 107 ----------s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~-~~-~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (211)
+.+.+.+..++.. .-|.+.||+- |... .+ .++.-+.+..+++.-. --|.+-+++++.+++++
T Consensus 328 dsf~~~~~~~~~~~a~~~A~~~v-~~GAdiIDIg----pg~~~v~~~ee~~rvv~~i~~~~~-vpisIDT~~~~v~eaal 401 (566)
T 1q7z_A 328 KKLWAEMQKGNEEIVIKEAKTQV-EKGAEVLDVN----FGIESQIDVRYVEKIVQTLPYVSN-VPLSLDIQNVDLTERAL 401 (566)
T ss_dssp HHHHHHHHTTCCHHHHHHHHHHH-HTTCSEEEEE----CSSGGGSCHHHHHHHHHHHHHHTC-SCEEEECCCHHHHHHHH
T ss_pred hhHHHHhhcCCHHHHHHHHHHHH-HCCCCEEEEC----CCCCCCCHHHHHHHHHHHHHhhCC-ceEEEeCCCHHHHHHHH
Confidence 2334444443333 5689999997 4321 22 3344344444443311 24788899999999998
Q ss_pred cc--CCceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 175 AV--HPITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 175 ~~--~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+. ++.-++ ..|..+ ..-+++++.++++|..|+.+
T Consensus 402 ~~~~G~~iIN--dis~~~-~~~~~~~~~~~~~g~~vV~m 437 (566)
T 1q7z_A 402 RAYPGRSLFN--SAKVDE-EELEMKINLLKKYGGTLIVL 437 (566)
T ss_dssp HHCSSCCEEE--EEESCH-HHHHHHHHHHHHHCCEEEEE
T ss_pred HhcCCCCEEE--ECCcch-hhHHHHHHHHHHhCCeEEEE
Confidence 87 443233 333322 10157899999999998864
No 200
>1y80_A Predicted cobalamin binding protein; corrinoid, factor IIIM, methyl transferase, structural genomics, PSI, protein structure initiative; HET: B1M; 1.70A {Moorella thermoacetica}
Probab=42.70 E-value=92 Score=23.05 Aligned_cols=22 Identities=14% Similarity=0.277 Sum_probs=0.0
Q ss_pred CHHHHHHHHHHHHHcCCCeEeC
Q 028240 40 SEEDGISIIKHAFSKGITFFDT 61 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~Dt 61 (211)
+++.+.+.++.+++.|+...+.
T Consensus 15 d~~~~~~~~~~al~~g~~~~~i 36 (210)
T 1y80_A 15 DEAQVVELTRSLLSGGAEPLEV 36 (210)
T ss_dssp ----------------------
T ss_pred CHHHHHHHHHHHHHcCCCHHHH
Confidence 5678888999999888765543
No 201
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=42.40 E-value=1.4e+02 Score=24.57 Aligned_cols=128 Identities=20% Similarity=0.161 Sum_probs=75.2
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHH-----------------Hhc--CCCCcEEEEeccccccCCC
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA-----------------LKE--LPRENIQVATKFGFVELGF 99 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~-----------------l~~--~~r~~~~i~tK~~~~~~~~ 99 (211)
.+.+....+.+++-+.|+.+|=|..... +-.++-+. |+. ...+.+++.|=..
T Consensus 75 l~~e~~~~L~~~~~~~Gi~~~st~fD~~---svd~l~~~~v~~~KI~S~~~~N~pLL~~va~~gKPviLstGms------ 145 (350)
T 3g8r_A 75 LQPEQMQKLVAEMKANGFKAICTPFDEE---SVDLIEAHGIEIIKIASCSFTDWPLLERIARSDKPVVASTAGA------ 145 (350)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHTTCCEEEECSSSTTCHHHHHHHHTSCSCEEEECTTC------
T ss_pred CCHHHHHHHHHHHHHcCCcEEeccCCHH---HHHHHHHcCCCEEEECcccccCHHHHHHHHhhCCcEEEECCCC------
Confidence 5678888888888899999987765433 22223221 111 0233444444331
Q ss_pred cccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCC-CHHH-HHHHHHHHHHcC-cccEEEeCCCCH----HHHHH
Q 028240 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEE-TIGEMKKLVEEG-KIKYIGLSEASP----DTIRR 172 (211)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~----~~l~~ 172 (211)
+-+.+..+++-.++. |. ++.++|+..... +.++ -+.++..|++.= -+ -||.|.|+. .....
T Consensus 146 -------tl~Ei~~Ave~i~~~-g~---~viLlhC~s~YPt~~~~~nL~aI~~Lk~~fp~l-pVG~SdHt~g~~~~~~~A 213 (350)
T 3g8r_A 146 -------RREDIDKVVSFMLHR-GK---DLTIMHCVAEYPTPDDHLHLARIKTLRQQYAGV-RIGYSTHEDPDLMEPIML 213 (350)
T ss_dssp -------CHHHHHHHHHHHHTT-TC---CEEEEECCCCSSCCGGGCCTTHHHHHHHHCTTS-EEEEEECCCSSCCHHHHH
T ss_pred -------CHHHHHHHHHHHHHc-CC---CEEEEecCCCCCCCcccCCHHHHHHHHHHCCCC-CEEcCCCCCCCccHHHHH
Confidence 678899999888765 52 788999875432 2222 366667777642 22 389998873 22234
Q ss_pred HhccCCceEEeccCCc
Q 028240 173 AHAVHPITAVQLEWSL 188 (211)
Q Consensus 173 ~~~~~~~~~~q~~~~~ 188 (211)
++..+. .++..++.+
T Consensus 214 AvAlGA-~vIEkH~tl 228 (350)
T 3g8r_A 214 AVAQGA-TVFEKHVGL 228 (350)
T ss_dssp HHHTTC-CEEEEEBCC
T ss_pred HHHcCC-CEEEEecCc
Confidence 444433 466666665
No 202
>3ble_A Citramalate synthase from leptospira interrogans; TIM barrel, licmsn, substrate specificity, acyltransferase, amino-acid biosynthesis; 2.00A {Leptospira interrogans} PDB: 3blf_A 3bli_A*
Probab=41.70 E-value=99 Score=25.06 Aligned_cols=95 Identities=11% Similarity=0.117 Sum_probs=55.0
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEee-cCCCCCCHHHHHHHHHHHHHc-------CcccEEEeCCCCHHHHHHHhccC
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQH-RVDTSVPIEETIGEMKKLVEE-------GKIKYIGLSEASPDTIRRAHAVH 177 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh-~~~~~~~~~~~~~~l~~l~~~-------G~ir~iGvs~~~~~~l~~~~~~~ 177 (211)
++.+...+-++..|.++|+++|++-..- .|+ -|+++.++++. ..++..++..... .++.+.+..
T Consensus 38 ~~~~~k~~i~~~~L~~~Gv~~IE~g~~~~~~~-------~~~~v~~~~~~~~~~~~~~~~~i~~l~~~~~-~i~~a~~~g 109 (337)
T 3ble_A 38 FSTSEKLNIAKFLLQKLNVDRVEIASARVSKG-------ELETVQKIMEWAATEQLTERIEILGFVDGNK-TVDWIKDSG 109 (337)
T ss_dssp CCHHHHHHHHHHHHHTTCCSEEEEEETTSCTT-------HHHHHHHHHHHHHHTTCGGGEEEEEESSTTH-HHHHHHHHT
T ss_pred cCHHHHHHHHHHHHHHcCCCEEEEeCCCCChh-------HHHHHHHHHhhhhhhccCCCCeEEEEccchh-hHHHHHHCC
Confidence 5566665555548889999999985432 232 35666666653 2356666665543 677766643
Q ss_pred CceEEeccCCccc--------cC------chhhHHHHHHHcCCeee
Q 028240 178 PITAVQLEWSLWA--------RD------IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 178 ~~~~~q~~~~~~~--------~~------~~~~~~~~~~~~gi~v~ 209 (211)
.+.+.+..+..+ .. .-.+.+++|+++|+.|.
T Consensus 110 -~~~v~i~~~~s~~~~~~~~~~s~~e~l~~~~~~v~~ak~~G~~v~ 154 (337)
T 3ble_A 110 -AKVLNLLTKGSLHHLEKQLGKTPKEFFTDVSFVIEYAIKSGLKIN 154 (337)
T ss_dssp -CCEEEEEEECSHHHHHHHTCCCHHHHHHHHHHHHHHHHHTTCEEE
T ss_pred -CCEEEEEEecCHHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 233333332211 11 12357888999998764
No 203
>3iix_A Biotin synthetase, putative; adoMet radical, SAM radical, adoMet cleavage, Fe4S4 cluster, HYDE, hydrogenase, maturation, beta barrel; HET: OTY CSO 5AD CPS; 1.25A {Thermotoga maritima} PDB: 3ciw_A* 3iiz_A* 3cix_A*
Probab=41.60 E-value=73 Score=25.43 Aligned_cols=119 Identities=15% Similarity=0.181 Sum_probs=64.3
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
.+.++..+.++.+.+.|++.|-....-.+-..-+.+-+.++.+....+.|.+-.+. .+++.++ .
T Consensus 84 ls~eei~~~i~~~~~~g~~~i~~~gGe~p~~~~~~~~~li~~i~~~~~~i~~s~g~-----------l~~e~l~-----~ 147 (348)
T 3iix_A 84 MTPEEIVERARLAVQFGAKTIVLQSGEDPYXMPDVISDIVKEIKKMGVAVTLSLGE-----------WPREYYE-----K 147 (348)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEEEESCCGGGTTHHHHHHHHHHHTTSCEEEEECCC-----------CCHHHHH-----H
T ss_pred CCHHHHHHHHHHHHHCCCCEEEEEeCCCCCccHHHHHHHHHHHHhcCceEEEecCC-----------CCHHHHH-----H
Confidence 47899999999999999987654311100001133444444322225555543221 1333333 3
Q ss_pred HhhcCCCceeEEEeecCC--------CCCCHHHHHHHHHHHHHcCcccE----EEeCCCCHHHHHHHh
Q 028240 119 LRRLDVEYIDLYYQHRVD--------TSVPIEETIGEMKKLVEEGKIKY----IGLSEASPDTIRRAH 174 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~--------~~~~~~~~~~~l~~l~~~G~ir~----iGvs~~~~~~l~~~~ 174 (211)
|+..|++++- +-++..+ ....+++.+++++.+++.|.--. +|+.+.+.+.+.+.+
T Consensus 148 L~~ag~~~v~-i~let~~~~~~~~i~~~~~~~~~~~~i~~~~~~Gi~v~~~~i~G~p~et~e~~~~~~ 214 (348)
T 3iix_A 148 WKEAGADRYL-LRHETANPVLHRKLRPDTSFENRLNCLLTLKELGYETGAGSMVGLPGQTIDDLVDDL 214 (348)
T ss_dssp HHHHTCCEEE-CCCBCSCHHHHHHHSTTSCHHHHHHHHHHHHHTTCEEEECBEESCTTCCHHHHHHHH
T ss_pred HHHhCCCEEe-eeeeeCCHHHHHHhCCCcCHHHHHHHHHHHHHhCCeeccceEEeCCCCCHHHHHHHH
Confidence 4445665543 2233332 12357899999999999986322 234356777666543
No 204
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=41.55 E-value=1.3e+02 Score=23.75 Aligned_cols=104 Identities=13% Similarity=0.012 Sum_probs=65.1
Q ss_pred CCChHHHHHHHHHHHh-hcCCCceeEEEeecCCCC-CCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEE
Q 028240 105 KGTPEYVRSCCEASLR-RLDVEYIDLYYQHRVDTS-VPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~-~Lg~~~iDl~~lh~~~~~-~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~ 182 (211)
+.+.+.--+..+-..+ .+++++|-|..+..+... .+..+++++.++|+++|..- +=+++-++....++.+... +++
T Consensus 83 ~~ta~eAv~~a~lare~~~~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~V-lpy~~dd~~~akrl~~~G~-~aV 160 (265)
T 1wv2_A 83 CYDAVEAVRTCRLARELLDGHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDV-MVYTSDDPIIARQLAEIGC-IAV 160 (265)
T ss_dssp CCSHHHHHHHHHHHHTTTTSCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEE-EEEECSCHHHHHHHHHSCC-SEE
T ss_pred CCCHHHHHHHHHHHHHHcCCCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEE-EEEeCCCHHHHHHHHHhCC-CEE
Confidence 4577777778888888 789998888877555433 46889999999999999754 3345666666555555433 333
Q ss_pred eccCCccc--cC-chhhHHHHHHHc-CCeeee
Q 028240 183 QLEWSLWA--RD-IENEIVPLCRFV-RLAVKS 210 (211)
Q Consensus 183 q~~~~~~~--~~-~~~~~~~~~~~~-gi~v~a 210 (211)
...-.+.- ++ ...++++..++. ++.|++
T Consensus 161 mPlg~pIGsG~Gi~~~~lI~~I~e~~~vPVI~ 192 (265)
T 1wv2_A 161 MPLAGLIGSGLGICNPYNLRIILEEAKVPVLV 192 (265)
T ss_dssp EECSSSTTCCCCCSCHHHHHHHHHHCSSCBEE
T ss_pred EeCCccCCCCCCcCCHHHHHHHHhcCCCCEEE
Confidence 22111111 11 123455555554 777764
No 205
>1w6t_A Enolase; bacterial infection, surface protein, moonlighting protein, glycolysis, phosphopyruvate hydratase, lyase; HET: 2PE; 2.10A {Streptococcus pneumoniae} SCOP: c.1.11.1 d.54.1.1 PDB: 1iyx_A
Probab=41.53 E-value=1.3e+02 Score=25.31 Aligned_cols=95 Identities=11% Similarity=0.016 Sum_probs=60.5
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-C-ccc-EEEeC-CCCHHHHHHHhccCCceE
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-G-KIK-YIGLS-EASPDTIRRAHAVHPITA 181 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G-~ir-~iGvs-~~~~~~l~~~~~~~~~~~ 181 (211)
++++...+-+++..+.+ +++++..|-+..+ |+.+.+|.++ | .+. ..|=+ .++...+.++++....++
T Consensus 279 ~t~~eai~~~~~l~~~~-----~i~~iEePl~~~d----~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~~i~~~a~d~ 349 (444)
T 1w6t_A 279 RTSAEQIDYLEELVNKY-----PIITIEDGMDEND----WDGWKALTERLGKKVQLVGDDFFVTNTDYLARGIQEGAANS 349 (444)
T ss_dssp ECHHHHHHHHHHHHHHS-----CEEEEESCSCTTC----HHHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSE
T ss_pred CCHHHHHHHHHHHHHhC-----CcEEEECCCChhh----HHHHHHHHHhhCCCCeEEeCCcccCCHHHHHHHHHcCCCCE
Confidence 35555555555544433 5788888865443 4555555544 2 332 33334 568899999998888899
Q ss_pred EeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 182 VQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 182 ~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+|+..+-.-. ....++...|+++|+.++
T Consensus 350 i~ik~~~~GGitea~~ia~lA~~~g~~v~ 378 (444)
T 1w6t_A 350 ILIKVNQIGTLTETFEAIEMAKEAGYTAV 378 (444)
T ss_dssp EEECHHHHCSHHHHHHHHHHHHHTTCEEE
T ss_pred EEEcccccCCHHHHHHHHHHHHHCCCeEE
Confidence 9997764211 112468999999999875
No 206
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=41.49 E-value=2e+02 Score=25.87 Aligned_cols=135 Identities=16% Similarity=0.089 Sum_probs=72.9
Q ss_pred HHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHHHHhc---CCCCcEEEEeccccccC
Q 028240 43 DGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGKALKE---LPRENIQVATKFGFVEL 97 (211)
Q Consensus 43 ~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~~l~~---~~r~~~~i~tK~~~~~~ 97 (211)
+..+.-+.|.++|+..+|. | +.||. .-|. ++-+.++. .-.+++-|..|+.+...
T Consensus 150 ~f~~aA~~a~~aGfDgVEih~a~gyLl~qFlsp~~N~R~D~yGG-s~enR~r~~~eiv~avr~~vg~~~pv~vrls~~~~ 228 (729)
T 1o94_A 150 FYVDAAKRSRDAGFDIVYVYGAHSYLPLQFLNPYYNKRTDKYGG-SLENRARFWLETLEKVKHAVGSDCAIATRFGVDTV 228 (729)
T ss_dssp HHHHHHHHHHHTTCSEEEEEECTTCHHHHHHCTTTCCCCSTTSS-SHHHHTHHHHHHHHHHHHHHTTTSEEEEEEEEECS
T ss_pred HHHHHHHHHHHcCCCEEEEccccchHHHHhcCCccCCCcCcCCC-CHHHHhHHHHHHHHHHHHHhCCCceEEEEEccccC
Confidence 3445556677899998874 2 24552 2222 22233322 12346778889876432
Q ss_pred C-CcccccCCC-hHHHHHHHHHHHhhcCCCceeEEEee---cCCCCC-----CHHHHHHHHHHHHHcCcccEEEeCCC-C
Q 028240 98 G-FTSVIVKGT-PEYVRSCCEASLRRLDVEYIDLYYQH---RVDTSV-----PIEETIGEMKKLVEEGKIKYIGLSEA-S 166 (211)
Q Consensus 98 ~-~~~~~~~~s-~~~i~~~~~~sL~~Lg~~~iDl~~lh---~~~~~~-----~~~~~~~~l~~l~~~G~ir~iGvs~~-~ 166 (211)
. +++ .+ .+...+ +-+.|+. ++|.+++-..| +..... +....++...++++.=.+--|++..+ +
T Consensus 229 ~~~~G----~~~~~~~~~-~~~~l~~-~~d~~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~pvi~~G~i~~ 302 (729)
T 1o94_A 229 YGPGQ----IEAEVDGQK-FVEMADS-LVDMWDITIGDIAEWGEDAGPSRFYQQGHTIPWVKLVKQVSKKPVLGVGRYTD 302 (729)
T ss_dssp SCTTS----CCTTTHHHH-HHHHHGG-GCSEEEEEECCSTTGGGTSCCTTTCCTTTTHHHHHHHHTTCSSCEECCSCCCC
T ss_pred cCCCC----CCchHHHHH-HHHHHHh-hcCEEEEeeecccccccccCCccccCccccHHHHHHHHHHCCCEEEEeCCCCC
Confidence 1 111 12 223322 4455555 47777776654 211101 11113566667777667778888776 6
Q ss_pred HHHHHHHhccCCceEEec
Q 028240 167 PDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 167 ~~~l~~~~~~~~~~~~q~ 184 (211)
++..+++++....+.+++
T Consensus 303 ~~~a~~~l~~g~aD~V~~ 320 (729)
T 1o94_A 303 PEKMIEIVTKGYADIIGC 320 (729)
T ss_dssp HHHHHHHHHTTSCSBEEE
T ss_pred HHHHHHHHHCCCCCEEEe
Confidence 888888887765555544
No 207
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=39.90 E-value=95 Score=23.36 Aligned_cols=67 Identities=18% Similarity=0.135 Sum_probs=35.7
Q ss_pred HHHHHH-HHHHHHcCcccEEEeCCCCHHHHHHHhccC---CceEEeccCCccc---cCchhhHHHHHHHcCCeee
Q 028240 142 EETIGE-MKKLVEEGKIKYIGLSEASPDTIRRAHAVH---PITAVQLEWSLWA---RDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 142 ~~~~~~-l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~---~~~~~q~~~~~~~---~~~~~~~~~~~~~~gi~v~ 209 (211)
+++++. .+++++. -|++|=|.+.+-+...++.+.. ++.++-.++..-. ....++..+..++.|+.|+
T Consensus 29 ~~tl~la~era~e~-~Ik~iVVAS~sG~TA~k~~e~~~~i~lVvVTh~~GF~~pg~~e~~~e~~~~L~~~G~~V~ 102 (201)
T 1vp8_A 29 EETLRLAVERAKEL-GIKHLVVASSYGDTAMKALEMAEGLEVVVVTYHTGFVREGENTMPPEVEEELRKRGAKIV 102 (201)
T ss_dssp HHHHHHHHHHHHHH-TCCEEEEECSSSHHHHHHHHHCTTCEEEEEECCTTSSSTTCCSSCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHHHc-CCCEEEEEeCCChHHHHHHHHhcCCeEEEEeCcCCCCCCCCCcCCHHHHHHHHhCCCEEE
Confidence 345554 3444444 4788877776544444433322 3333333222222 2235678888899988876
No 208
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=38.92 E-value=1.5e+02 Score=24.33 Aligned_cols=128 Identities=24% Similarity=0.267 Sum_probs=75.4
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHH-----------------Hhc--CCCCcEEEEeccccccCCC
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKA-----------------LKE--LPRENIQVATKFGFVELGF 99 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~-----------------l~~--~~r~~~~i~tK~~~~~~~~ 99 (211)
.+.+....+.+++-+.|+.+|=|...-. +-..+-+. |+. ...+.+++.|=..
T Consensus 88 l~~e~~~~L~~~~~~~Gi~~~st~~d~~---svd~l~~~~v~~~KI~S~~~~n~~LL~~va~~gkPviLstGma------ 158 (349)
T 2wqp_A 88 LNEEDEIKLKEYVESKGMIFISTLFSRA---AALRLQRMDIPAYKIGSGECNNYPLIKLVASFGKPIILSTGMN------ 158 (349)
T ss_dssp CCHHHHHHHHHHHHHTTCEEEEEECSHH---HHHHHHHHTCSCEEECGGGTTCHHHHHHHHTTCSCEEEECTTC------
T ss_pred CCHHHHHHHHHHHHHhCCeEEEeeCCHH---HHHHHHhcCCCEEEECcccccCHHHHHHHHhcCCeEEEECCCC------
Confidence 4667788888888899999987665433 22233222 111 0233444433321
Q ss_pred cccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCC-CHHH-HHHHHHHHHHcC-cccEEEeCCCCHH--HHHHHh
Q 028240 100 TSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSV-PIEE-TIGEMKKLVEEG-KIKYIGLSEASPD--TIRRAH 174 (211)
Q Consensus 100 ~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-~~~~-~~~~l~~l~~~G-~ir~iGvs~~~~~--~l~~~~ 174 (211)
+-+.+..+++-.+.. |. ++.++|+..... +.++ -+.++..|++.= -+ -||.|.|+.. ....++
T Consensus 159 -------t~~Ei~~Ave~i~~~-G~---~iiLlhc~s~Yp~~~~~~nL~ai~~lk~~f~~l-pVg~sdHt~G~~~~~AAv 226 (349)
T 2wqp_A 159 -------SIESIKKSVEIIREA-GV---PYALLHCTNIYPTPYEDVRLGGMNDLSEAFPDA-IIGLSDHTLDNYACLGAV 226 (349)
T ss_dssp -------CHHHHHHHHHHHHHH-TC---CEEEEECCCCSSCCGGGCCTHHHHHHHHHCTTS-EEEEECCSSSSHHHHHHH
T ss_pred -------CHHHHHHHHHHHHHc-CC---CEEEEeccCCCCCChhhcCHHHHHHHHHHCCCC-CEEeCCCCCcHHHHHHHH
Confidence 578899898877654 43 899999875542 2332 467777777763 22 5799998743 222233
Q ss_pred ccCCceEEeccCCc
Q 028240 175 AVHPITAVQLEWSL 188 (211)
Q Consensus 175 ~~~~~~~~q~~~~~ 188 (211)
..+. +++..++++
T Consensus 227 AlGA-~iIEkH~tl 239 (349)
T 2wqp_A 227 ALGG-SILERHFTD 239 (349)
T ss_dssp HHTC-CEEEEEBCS
T ss_pred HhCC-CEEEeCCCc
Confidence 3222 366666665
No 209
>2ab1_A Hypothetical protein; HS.95870, DUF498, structural genomics, protein structure INI PSI, center for eukaryotic structural genomics, CESG; 2.59A {Homo sapiens} SCOP: c.103.1.1 PDB: 2q4q_A
Probab=38.44 E-value=61 Score=22.22 Aligned_cols=46 Identities=7% Similarity=0.186 Sum_probs=26.3
Q ss_pred CCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeeeeC
Q 028240 165 ASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 165 ~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~a~ 211 (211)
.+++.+..+++ .+|+++-+---.-.+ ....++.++.+++||+|..|
T Consensus 49 l~~~~l~~ll~-~~~evliiGtG~~~~~~~~~~~~~~l~~~gI~ve~m 95 (122)
T 2ab1_A 49 VQPADVKEVVE-KGVQTLVIGRGMSEALKVPSSTVEYLKKHGIDVRVL 95 (122)
T ss_dssp CCHHHHHHHHT-TCCSEEEEEECSSCCSCCCHHHHHHHHHTTCEEEEE
T ss_pred CCHHHHHHHhh-CCCCEEEECCCCCCccCCCHHHHHHHHHcCCEEEEe
Confidence 45667776665 334554332222122 13457888888888888653
No 210
>3gka_A N-ethylmaleimide reductase; decode biostructures, ssgcid, niaid, targetdb bupsa00093A, structural genomics; HET: FMN; 2.30A {Burkholderia pseudomallei} SCOP: c.1.4.0
Probab=38.42 E-value=1.6e+02 Score=24.08 Aligned_cols=63 Identities=13% Similarity=-0.002 Sum_probs=37.7
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEec
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (211)
..+-+.|+..|+++|++ |...... +.+.++++.=.+--|++..++++..+++++....+.+.+
T Consensus 253 ~~la~~l~~~Gvd~i~v---~~~~~~~------~~~~~ik~~~~iPvi~~Ggit~e~a~~~l~~G~aD~V~i 315 (361)
T 3gka_A 253 GHVARELGRRRIAFLFA---RESFGGD------AIGQQLKAAFGGPFIVNENFTLDSAQAALDAGQADAVAW 315 (361)
T ss_dssp HHHHHHHHHTTCSEEEE---ECCCSTT------CCHHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred HHHHHHHHHcCCCEEEE---CCCCCCH------HHHHHHHHHcCCCEEEeCCCCHHHHHHHHHcCCccEEEE
Confidence 44566778889877665 5443211 123333333235567777778888888887765555543
No 211
>2p3z_A L-rhamnonate dehydratase; enolase, structural genomics, PSI, protein structure initiat YORK structural genomics research consortium; 1.80A {Salmonella typhimurium LT2} PDB: 3box_A 3cxo_A* 2gsh_A 3d47_A 3d46_A 2i5q_A
Probab=38.16 E-value=1e+02 Score=25.81 Aligned_cols=77 Identities=13% Similarity=0.084 Sum_probs=49.6
Q ss_pred eEEEeecCCCCCCHHHHHHHHHHHHHcCc--cc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHH
Q 028240 128 DLYYQHRVDTSVPIEETIGEMKKLVEEGK--IK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRF 203 (211)
Q Consensus 128 Dl~~lh~~~~~~~~~~~~~~l~~l~~~G~--ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~ 203 (211)
++.++..|-+.. -++.+.+|.+.-. |. ..|=+-++...+.++++.. .+++|+..+-.=. .....+...|++
T Consensus 249 ~i~~iEqPl~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~i~~~-~d~i~ik~~~~GGitea~~ia~lA~~ 323 (415)
T 2p3z_A 249 NLKWIEECLPPQ----QYEGYRELKRNAPAGMMVTSGEHHGTLQSFRTLAETG-IDIMQPDVGWCGGLTTLVEIAALAKS 323 (415)
T ss_dssp TCCEEECCSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHHHHTT-CSEECCCHHHHTCHHHHHHHHHHHHH
T ss_pred CCceEeCCCCcc----hHHHHHHHHHhcCCCCcEEcCCCCCCHHHHHHHHHcC-CCEEEeCccccCCHHHHHHHHHHHHH
Confidence 345556664332 3556666665422 21 3344557888999998888 9999987664211 112468999999
Q ss_pred cCCeee
Q 028240 204 VRLAVK 209 (211)
Q Consensus 204 ~gi~v~ 209 (211)
+|+.++
T Consensus 324 ~gi~v~ 329 (415)
T 2p3z_A 324 RGQLVV 329 (415)
T ss_dssp TTCCBC
T ss_pred cCCEEE
Confidence 999875
No 212
>1gtz_A 3-dehydroquinate dehydratase; lyase, type II dehydroquinase, shikimate pathway, dodecameric quaternary structure; HET: DHK; 1.6A {Streptomyces coelicolor} SCOP: c.23.13.1 PDB: 2bt4_A* 1v1j_A* 2cjf_A* 1d0i_A 1gu0_A 1gu1_A*
Probab=37.37 E-value=49 Score=23.92 Aligned_cols=81 Identities=12% Similarity=0.048 Sum_probs=55.4
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--CcccEEEeCCCCHHHHHHHhccCC-ceE
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHP-ITA 181 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~-~~~ 181 (211)
..+.+.|.+.+.+.-+.+|++ ++++|-. .-.+.++++.+..+. |.|--=|--+|+.-.+.+++.... +-+
T Consensus 30 ~~Tl~di~~~l~~~a~~~g~~-v~~~QSN------~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~~P~ 102 (156)
T 1gtz_A 30 SDTLADVEALCVKAAAAHGGT-VDFRQSN------HEGELVDWIHEARLNHCGIVINPAAYSHTSVAILDALNTCDGLPV 102 (156)
T ss_dssp SCCHHHHHHHHHHHHHTTTCC-EEEEECS------CHHHHHHHHHHHHHHCSEEEEECTTHHHHCHHHHHHHHTSTTCCE
T ss_pred CCCHHHHHHHHHHHHHHcCCE-EEEEeeC------CHHHHHHHHHHhhhcCcEEEECchhhccccHHHHHHHHhcCCCCE
Confidence 347899999999999999974 7777622 123677777777653 334333444555566777777766 778
Q ss_pred EeccCCccccC
Q 028240 182 VQLEWSLWARD 192 (211)
Q Consensus 182 ~q~~~~~~~~~ 192 (211)
+.++.|-.+..
T Consensus 103 VEVHiSNi~aR 113 (156)
T 1gtz_A 103 VEVHISNIHQR 113 (156)
T ss_dssp EEEESSCGGGS
T ss_pred EEEEecCcccc
Confidence 88888866543
No 213
>4dxk_A Mandelate racemase / muconate lactonizing enzyme protein; enolase, mandelate racemase subgroup, enzyme function initia EFI; 1.25A {Agrobacterium tumefaciens} PDB: 4dx3_A 2pod_A
Probab=37.36 E-value=1e+02 Score=25.51 Aligned_cols=84 Identities=11% Similarity=0.047 Sum_probs=55.9
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cch
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIE 194 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~ 194 (211)
+.|+.+++++ ++.|-+.. .++.+.++++.-.+. +.|=|-++..+++++++....+++|+..+-.=- ..-
T Consensus 231 ~~L~~~~i~~-----iEeP~~~~----~~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~l~~~a~d~v~~d~~~~GGit~~ 301 (400)
T 4dxk_A 231 KALTPYQTFW-----HEDPIKMD----SLSSLTRYAAVSPAPISASETLGSRWAFRDLLETGAAGVVMLDISWCGGLSEA 301 (400)
T ss_dssp HHTGGGCCSE-----EECCBCTT----SGGGHHHHHHHCSSCEEECTTCCHHHHHHHHHHTTCCCEEEECTTTTTHHHHH
T ss_pred HHHhhcCCCE-----EEcCCCcc----cHHHHHHHHHhCCCCEEecCCcCCHHHHHHHHHcCCCCEEEeCccccCCHHHH
Confidence 4556666544 44554322 345567777664444 344455788899999998889999998875321 123
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+...|+.+|+.+.
T Consensus 302 ~kia~~A~~~gi~~~ 316 (400)
T 4dxk_A 302 RKIASMAEAWHLPVA 316 (400)
T ss_dssp HHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHcCCEEE
Confidence 468999999999884
No 214
>2pge_A MENC; OSBS, NYSGXRC, PSI-II, structural genomics, protein structure initiative; 1.60A {Desulfotalea psychrophila LSV54}
Probab=37.07 E-value=1.3e+02 Score=24.64 Aligned_cols=148 Identities=11% Similarity=0.041 Sum_probs=78.2
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHH---HHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNE---ILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E---~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
++++..+.++.+++.|++.|-.- .|....+ +.+....+....+++.|..-.... ++.+...+-+
T Consensus 162 ~~e~~~~~a~~~~~~G~~~~K~K--vg~~~~~~d~~~v~avr~~~g~~~~~l~vDaN~~----------~~~~~a~~~~- 228 (377)
T 2pge_A 162 EAAFMQEQIEAKLAEGYGCLKLK--IGAIDFDKECALLAGIRESFSPQQLEIRVDANGA----------FSPANAPQRL- 228 (377)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEE--C---CHHHHHHHHHHHHHHSCTTTCEEEEECTTB----------BCTTTHHHHH-
T ss_pred CHHHHHHHHHHHHHHhhhhheee--cCCCChHHHHHHHHHHHHHcCCCCceEEEECCCC----------CCHHHHHHHH-
Confidence 45677777888889999987632 1211122 233332222321344444333211 1333333322
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHH--HHHHhccCCceEEeccCCcccc-C
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDT--IRRAHAVHPITAVQLEWSLWAR-D 192 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~--l~~~~~~~~~~~~q~~~~~~~~-~ 192 (211)
+.|+.+ ++.++..|-+..+ ++.+.+|.++-.+. +.|=|-++... +.++++....+++|+..+-.-. .
T Consensus 229 ~~l~~~-----~i~~iEqP~~~~d----~~~~~~l~~~~~ipIa~dE~~~~~~~~~~~~~i~~~a~d~i~ik~~~~GGit 299 (377)
T 2pge_A 229 KRLSQF-----HLHSIEQPIRQHQ----WSEMAALCANSPLAIALDEELIGLGAEQRSAMLDAIRPQYIILKPSLLGGFH 299 (377)
T ss_dssp HHHHTT-----CCSEEECCBCSSC----HHHHHHHHHHCSSCEEESGGGTTCCTHHHHHHHHHHCCSEEEECHHHHTSHH
T ss_pred HHHhcC-----CCcEEEccCCccc----HHHHHHHHhhCCCcEEECCccCCcchHHHHHHHHhCCCCEEEECchhcCCHH
Confidence 444544 4556777754333 56666776654333 33333344333 6677776677888887664211 1
Q ss_pred chhhHHHHHHHcCCeee
Q 028240 193 IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 193 ~~~~~~~~~~~~gi~v~ 209 (211)
....+...|+++|+.++
T Consensus 300 ~~~~i~~~A~~~g~~~~ 316 (377)
T 2pge_A 300 YAGQWIELARERGIGFW 316 (377)
T ss_dssp HHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHCCCeEE
Confidence 12468889999999874
No 215
>1gk8_I Ribulose bisphosphate carboxylase small chain 1; lyase, rubisco, photosynthesis; HET: KCX CAP; 1.4A {Chlamydomonas reinhardtii} SCOP: d.73.1.1 PDB: 2v63_I* 2v67_I* 2v68_I* 2v69_I* 2v6a_I* 2vdh_I* 2vdi_I* 1uw9_C* 1uwa_C* 1ir2_I* 1uzd_C* 1uzh_C*
Probab=36.77 E-value=1.1e+02 Score=21.63 Aligned_cols=97 Identities=14% Similarity=0.102 Sum_probs=62.3
Q ss_pred eeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCe-E---eCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCc
Q 028240 25 GYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITF-F---DTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFT 100 (211)
Q Consensus 25 g~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~-~---DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~ 100 (211)
-|||.++ =++.++++..+-++.++..|..- + |....|-.+++-..+|..--.+.|...+-..|+..-
T Consensus 11 ~~etfSy----LP~lt~eqI~kQI~YlL~qGw~p~lEf~d~~~~~r~~~~~~~~~~~~~~yyd~~YW~mWkLPmF----- 81 (140)
T 1gk8_I 11 MFETFSY----LPPLTDEQIAAQVDYIVANGWIPCLEFAEADKAYVSNESAIRFGSVSCLYYDNRYWTMWKLPMF----- 81 (140)
T ss_dssp CCSTTTT----SSCCCHHHHHHHHHHHHHTTCEEEEEEECGGGTSCBCGGGGGCSSCCTTCCBTSSCEEESCCCT-----
T ss_pred eeccccc----CCCCCHHHHHHHHHHHHHCCCEeeEEeccCCcceecccccccccccCCCcCcCCeeeeCCcCCc-----
Confidence 3566543 23568899999999999999873 3 333345432232333322223566777777776532
Q ss_pred ccccCCChHHHHHHHHHHHhhcCCCceeEEEee
Q 028240 101 SVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQH 133 (211)
Q Consensus 101 ~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh 133 (211)
...++..+...|++.++.---.||-|+=+.
T Consensus 82 ---g~td~~qVl~El~~C~k~~P~~YVRligfD 111 (140)
T 1gk8_I 82 ---GCRDPMQVLREIVACTKAFPDAYVRLVAFD 111 (140)
T ss_dssp ---TCCCHHHHHHHHHHHHHHCTTSEEEEEEEE
T ss_pred ---CCCCHHHHHHHHHHHHHHCCCCeEEEEEEe
Confidence 234789999999999988876777776443
No 216
>3cpk_A Uncharacterized protein Q7W7N7_borpa; BPP2477, BER31, NESG, structural genomics, PSI-2, protein structure initiative; 2.50A {Bordetella parapertussis 12822} PDB: 2k2e_A
Probab=36.71 E-value=72 Score=22.89 Aligned_cols=34 Identities=9% Similarity=-0.040 Sum_probs=20.8
Q ss_pred CceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 178 PITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 178 ~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
+++++-+---.-.+....++++.++++||+|..|
T Consensus 88 ~pEvliiGTG~~~~~l~p~~~~~L~~~GIgvE~M 121 (150)
T 3cpk_A 88 APEVLLVGTGRRQHLLGPEQVRPLLAMGVGVEAM 121 (150)
T ss_dssp CCSEEEEECTTSCCCCCHHHHHHHHTTTCEEEEE
T ss_pred CCCEEEEcCCCCCCCCCHHHHHHHHHcCCEEEEe
Confidence 3555544333322333457889999999988754
No 217
>3qn3_A Enolase; structural genomics, center for structural genomics of infec diseases, csgid, glycolysis, lyase; 2.13A {Campylobacter jejuni}
Probab=36.63 E-value=1.9e+02 Score=24.27 Aligned_cols=130 Identities=15% Similarity=0.037 Sum_probs=77.1
Q ss_pred HHHHHHHHhcCC-CCcEEEEecccccc-CCCcccc---cCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHH
Q 028240 71 EILLGKALKELP-RENIQVATKFGFVE-LGFTSVI---VKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETI 145 (211)
Q Consensus 71 E~~lG~~l~~~~-r~~~~i~tK~~~~~-~~~~~~~---~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~ 145 (211)
-+.+-+++++.. ..++.|..-..... ..++.+. ..++++...+-+++.++.++ ++++..|-+..+ |
T Consensus 221 l~~i~~Air~aGy~~dv~l~vD~~ase~~~~g~y~l~~~~~t~~eai~~~~~ll~~y~-----i~~IEdPl~~dD----~ 291 (417)
T 3qn3_A 221 IDLLMTCIKKAGYENRVKIALDVASTEFFKDGKYHMEGKAFSSEALIERYVELCAKYP-----ICSIEDGLAEND----F 291 (417)
T ss_dssp HHHHHHHHHHTTCTTTEEEEEECCGGGGEETTEEEETTEEECHHHHHHHHHHHHHHSC-----EEEEESSSCTTC----H
T ss_pred HHHHHHHHHHcCCCCCceEEEECCchhhccCCeeecCCCccCHHHHHHHHHHHHhhcc-----eeEEecCCCccc----H
Confidence 344557777641 14777776553210 0011111 12356666666666666554 678888865443 4
Q ss_pred HHHHHHHHc-C-cccEEEe-CCCC-HHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 146 GEMKKLVEE-G-KIKYIGL-SEAS-PDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 146 ~~l~~l~~~-G-~ir~iGv-s~~~-~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
+.+.+|.++ | .|.-.|= +-++ ++.+.++++....+++|+..+-.-. ....++...|+++|+.++
T Consensus 292 e~~~~L~~~~g~~ipI~gDE~~~tn~~~~~~~i~~~a~d~i~iKv~qiGGiTea~kia~lA~~~G~~v~ 360 (417)
T 3qn3_A 292 EGWIKLTEKLGNKIQLVGDDLFVTNEDILREGIIKKMANAVLIKPNQIGTITQTMRTVRLAQRNNYKCV 360 (417)
T ss_dssp HHHHHHHHHHTTTSEEEESTTTTTCHHHHHHHHHHTCCSEEEECHHHHCSHHHHHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHhhCCCCceecCCcccCCHHHHHHHHHhCCCCEEEecCCCCCCHHHHHHHHHHHHHcCCeEE
Confidence 555555554 3 4543332 2244 8999999988888899888764221 123468899999999975
No 218
>3ndo_A Deoxyribose-phosphate aldolase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, ALS collaborative crystallography; HET: GOL; 1.25A {Mycobacterium smegmatis} PDB: 3ng3_A
Probab=36.20 E-value=50 Score=25.51 Aligned_cols=27 Identities=19% Similarity=0.204 Sum_probs=24.7
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYG 66 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg 66 (211)
++++...+.+.|.++|..|+=|+..|+
T Consensus 144 t~eei~~a~~ia~~aGADfVKTSTGf~ 170 (231)
T 3ndo_A 144 GEPLLADVCRVARDAGADFVKTSTGFH 170 (231)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSCC
T ss_pred CHHHHHHHHHHHHHHCcCEEEcCCCCC
Confidence 678889999999999999999998886
No 219
>3s83_A Ggdef family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, signaling protein; HET: MSE; 1.34A {Caulobacter crescentus} PDB: 3u2e_A
Probab=36.18 E-value=83 Score=23.92 Aligned_cols=97 Identities=13% Similarity=0.113 Sum_probs=59.1
Q ss_pred HHHHHHHHHHhhcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCcccEEEeCCCCHH--HHHHHhccCCceEEecc
Q 028240 110 YVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYIGLSEASPD--TIRRAHAVHPITAVQLE 185 (211)
Q Consensus 110 ~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~--~l~~~~~~~~~~~~q~~ 185 (211)
.+...+.+.+++.+...-. +.+.-.+. ..+.+...+.++.|++.|. .|.+.+|... .+..+ ...+++.+-++
T Consensus 106 ~~~~~l~~~l~~~~~~~~~-l~lEitE~~~~~~~~~~~~~l~~l~~~G~--~ialDdfG~g~ssl~~L-~~l~~d~iKiD 181 (259)
T 3s83_A 106 GLVADVAETLRVNRLPRGA-LKLEVTESDIMRDPERAAVILKTLRDAGA--GLALDDFGTGFSSLSYL-TRLPFDTLKID 181 (259)
T ss_dssp THHHHHHHHHHHTTCCTTS-EEEEEEHHHHHHCHHHHHHHHHHHHHHTC--EEEEECC---CHHHHHH-HHSCCCEEEEC
T ss_pred HHHHHHHHHHHHcCCCcce-EEEEECCchhhhCHHHHHHHHHHHHHCCC--EEEEECCCCCchhHHHH-HhCCCCEEEEC
Confidence 4566778888877754322 22222211 1235578888999999998 6777776542 33333 33567777776
Q ss_pred CCcccc--------CchhhHHHHHHHcCCeeee
Q 028240 186 WSLWAR--------DIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 186 ~~~~~~--------~~~~~~~~~~~~~gi~v~a 210 (211)
-++... ..-+.++..|++.|+.|+|
T Consensus 182 ~~~v~~~~~~~~~~~~~~~i~~~a~~~g~~via 214 (259)
T 3s83_A 182 RYFVRTMGNNAGSAKIVRSVVKLGQDLDLEVVA 214 (259)
T ss_dssp HHHHHHTTTCHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHhhhhcCchHHHHHHHHHHHHHHCCCeEEE
Confidence 554322 1134688999999999987
No 220
>2fkn_A Urocanate hydratase; rossman fold, lyase; HET: NAD; 2.20A {Bacillus subtilis}
Probab=35.96 E-value=1.1e+02 Score=26.56 Aligned_cols=125 Identities=18% Similarity=0.157 Sum_probs=77.2
Q ss_pred HHHHHHcCCCeEe--CCCCcC--------CCcHHHHHHHHHhc---CCCCcEEEEeccccccCCCcc---------cccC
Q 028240 48 IKHAFSKGITFFD--TADKYG--------PYTNEILLGKALKE---LPRENIQVATKFGFVELGFTS---------VIVK 105 (211)
Q Consensus 48 l~~A~~~Gi~~~D--tA~~Yg--------~g~~E~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~~---------~~~~ 105 (211)
.+..-+.|+.-+= ||..|- .|.-|.++.-+-+. -.+-++|+++-++-.....+- ...+
T Consensus 114 f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~E 193 (552)
T 2fkn_A 114 FHELEKKGLMMYGQMTAGSWIYIGSQGILQGTYETFAELARQHFGGSLKGTLTLTAGLGGMGGAQPLSVTMNEGVVIAVE 193 (552)
T ss_dssp HHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHSSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEE
Confidence 5666777887432 443331 13344444422222 235678888888754322100 0012
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc-CCceEE--
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAV-- 182 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~-- 182 (211)
.++..|+ +|+.+.|+|.+. .+++++++.+++.+++|+..+||+-..-++.++++.+. ..|+++
T Consensus 194 vd~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtD 259 (552)
T 2fkn_A 194 VDEKRID-------KRIETKYCDRKT-------ASIEEALAWAEEAKLAGKPLSIALLGNAAEVHHTLLNRGVKIDIVTD 259 (552)
T ss_dssp SCHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHHHTTCCEEEEEESCHHHHHHHHHTTTCCCSEECC
T ss_pred ECHHHHH-------HHHhCCcceeEc-------CCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCC
Confidence 2344333 567778888743 45789999999999999999999999888999998775 344444
Q ss_pred eccC
Q 028240 183 QLEW 186 (211)
Q Consensus 183 q~~~ 186 (211)
|...
T Consensus 260 QTSa 263 (552)
T 2fkn_A 260 QTSA 263 (552)
T ss_dssp CSCT
T ss_pred Cccc
Confidence 5544
No 221
>1p1x_A Deoxyribose-phosphate aldolase; alpha-beta barrel, TIM barrel, lyase; 0.99A {Escherichia coli} SCOP: c.1.10.1 PDB: 1jcl_A 1jcj_A* 1ktn_A 3npv_B 3npu_A 3npw_A 3nq2_A 3npx_A 3nq8_A 3q2d_A* 3nr0_A 3nqv_A
Probab=35.55 E-value=1.6e+02 Score=23.05 Aligned_cols=77 Identities=10% Similarity=0.049 Sum_probs=49.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC-CcHHH---HHHHHHhcCC-CCcEEEEeccccccCCCcccccCCChHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP-YTNEI---LLGKALKELP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSC 114 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~-g~~E~---~lG~~l~~~~-r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~ 114 (211)
+++....+.+.|.++|..|+=|+-.|+. |-+-+ ++-+.++.+. ..+ +--|..-.. .+.+...+-
T Consensus 148 d~e~i~~a~~ia~eaGADfVKTSTGf~~~gAt~e~v~lm~~~I~~~~~g~~--v~VKaaGGI---------rt~~~al~~ 216 (260)
T 1p1x_A 148 DEALIRKASEISIKAGADFIKTSTGKVAVNATPESARIMMEVIRDMGVEKT--VGFKPAGGV---------RTAEDAQKY 216 (260)
T ss_dssp SHHHHHHHHHHHHHTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHTCTTT--CEEECBSSC---------CSHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhcCCCC--ceEEEeCCC---------CCHHHHHHH
Confidence 3444778999999999999999988873 33333 5666665321 112 223332111 157888888
Q ss_pred HHHHHhhcCCCce
Q 028240 115 CEASLRRLDVEYI 127 (211)
Q Consensus 115 ~~~sL~~Lg~~~i 127 (211)
++..-..||-+++
T Consensus 217 i~aga~~lG~~w~ 229 (260)
T 1p1x_A 217 LAIADELFGADWA 229 (260)
T ss_dssp HHHHHHHHCTTSC
T ss_pred HHhhhhhcccccc
Confidence 8888887887654
No 222
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=35.47 E-value=73 Score=25.05 Aligned_cols=151 Identities=9% Similarity=0.078 Sum_probs=79.1
Q ss_pred CHHHHHHHHHHHHH-cCCCeEeCC----------CCcCCCcHHHHHHHHHhcCCCC-cEEEEeccccccCCCcccccCCC
Q 028240 40 SEEDGISIIKHAFS-KGITFFDTA----------DKYGPYTNEILLGKALKELPRE-NIQVATKFGFVELGFTSVIVKGT 107 (211)
Q Consensus 40 ~~~~~~~~l~~A~~-~Gi~~~DtA----------~~Yg~g~~E~~lG~~l~~~~r~-~~~i~tK~~~~~~~~~~~~~~~s 107 (211)
+.++..++.+.+.+ .|+..++.- ..||. ..+.+-+.++.+.+. ++-|..|+.+... +
T Consensus 109 ~~~~~~~~a~~~~~~~g~d~iei~~~~p~~~~g~~~~g~--~~~~~~eii~~v~~~~~~pv~vk~~~~~~---------~ 177 (311)
T 1ep3_A 109 EEADYVAVCAKIGDAANVKAIELNISCPNVKHGGQAFGT--DPEVAAALVKACKAVSKVPLYVKLSPNVT---------D 177 (311)
T ss_dssp SHHHHHHHHHHHTTSTTEEEEEEECCSEEGGGTTEEGGG--CHHHHHHHHHHHHHHCSSCEEEEECSCSS---------C
T ss_pred CHHHHHHHHHHHhccCCCCEEEEeCCCCCCCCchhhhcC--CHHHHHHHHHHHHHhcCCCEEEEECCChH---------H
Confidence 45677777777777 888877541 22332 333444444432111 3446666653210 2
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEE------eecCCCC----------CC---HHHHHHHHHHHHHcCcccEEEeCCC-CH
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYY------QHRVDTS----------VP---IEETIGEMKKLVEEGKIKYIGLSEA-SP 167 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~------lh~~~~~----------~~---~~~~~~~l~~l~~~G~ir~iGvs~~-~~ 167 (211)
... +-+.+...|+|+|++.- +|..... .. ....++.+.++++.=.+--|+.... ++
T Consensus 178 ~~~----~a~~l~~~G~d~i~v~~~~~g~~i~~~~~~~~~~~~~~g~~g~~~~~~~~~~i~~i~~~~~ipvia~GGI~~~ 253 (311)
T 1ep3_A 178 IVP----IAKAVEAAGADGLTMINTLMGVRFDLKTRQPILANITGGLSGPAIKPVALKLIHQVAQDVDIPIIGMGGVANA 253 (311)
T ss_dssp SHH----HHHHHHHTTCSEEEECCCEEECCBCTTTCSBSSTTSCEEEESGGGHHHHHHHHHHHHTTCSSCEEECSSCCSH
T ss_pred HHH----HHHHHHHcCCCEEEEeCCCcccccCcccCCccccCCCCcccCccchHHHHHHHHHHHHhcCCCEEEECCcCCH
Confidence 222 23345677988877721 1211100 00 1234677777877656777887775 78
Q ss_pred HHHHHHhccCCceEEeccCCcc-ccC----chhhHHHHHHHcCC
Q 028240 168 DTIRRAHAVHPITAVQLEWSLW-ARD----IENEIVPLCRFVRL 206 (211)
Q Consensus 168 ~~l~~~~~~~~~~~~q~~~~~~-~~~----~~~~~~~~~~~~gi 206 (211)
+.+.++++.+ .+.+|+--.++ ++. ..+++..+...+|.
T Consensus 254 ~d~~~~l~~G-Ad~V~vg~~~l~~p~~~~~i~~~l~~~~~~~g~ 296 (311)
T 1ep3_A 254 QDVLEMYMAG-ASAVAVGTANFADPFVCPKIIDKLPELMDQYRI 296 (311)
T ss_dssp HHHHHHHHHT-CSEEEECTHHHHCTTHHHHHHHHHHHHHHHTTC
T ss_pred HHHHHHHHcC-CCEEEECHHHHcCcHHHHHHHHHHHHHHHHcCC
Confidence 8999888755 56666532222 111 12334455556554
No 223
>1x87_A Urocanase protein; structural genomics, protein STR initiative, MCSG, PSI, midwest center for structural genomi; HET: MSE NAD; 2.40A {Geobacillus stearothermophilus} SCOP: e.51.1.1
Probab=35.24 E-value=1.1e+02 Score=26.55 Aligned_cols=91 Identities=19% Similarity=0.240 Sum_probs=61.2
Q ss_pred CCCcEEEEeccccccCCCcc---------cccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHH
Q 028240 82 PRENIQVATKFGFVELGFTS---------VIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV 152 (211)
Q Consensus 82 ~r~~~~i~tK~~~~~~~~~~---------~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~ 152 (211)
.+-++|+++-++-.....+- ...+.++..|+ +|+.+.|+|.+. .+++++++.+++.+
T Consensus 160 L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~Evd~~ri~-------~R~~~gyld~~~-------~~ldeal~~~~~a~ 225 (551)
T 1x87_A 160 LAGTITLTAGLGGMGGAQPLAVTMNGGVCLAIEVDPARIQ-------RRIDTNYLDTMT-------DSLDAALEMAKQAK 225 (551)
T ss_dssp CTTCEEEEECCSTTGGGHHHHHHHTTCEEEEEESCHHHHH-------HHHHTTSCSEEE-------SCHHHHHHHHHHHH
T ss_pred CCceEEEEecCCccchhhHHHHHHcCceEEEEEECHHHHH-------HHHhCCCceeEc-------CCHHHHHHHHHHHH
Confidence 35678888887643222100 00122344443 566778888743 45789999999999
Q ss_pred HcCcccEEEeCCCCHHHHHHHhcc-CCceEE--eccC
Q 028240 153 EEGKIKYIGLSEASPDTIRRAHAV-HPITAV--QLEW 186 (211)
Q Consensus 153 ~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~--q~~~ 186 (211)
++|+..+||+-..-++.++++.+. ..|+++ |...
T Consensus 226 ~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtDQTSa 262 (551)
T 1x87_A 226 EEKKALSIGLVGNAAEVLPRLVETGFVPDVLTDQTSA 262 (551)
T ss_dssp HTTCCEEEEEESCHHHHHHHHHHTTCCCSEECCCSCT
T ss_pred HcCCceEEEEeccHHHHHHHHHHCCCCCCCCCCCccc
Confidence 999999999999888889888765 344444 5544
No 224
>2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp}
Probab=35.01 E-value=18 Score=31.20 Aligned_cols=22 Identities=18% Similarity=0.327 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHcCCCeEeCCC
Q 028240 42 EDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
-....++++|++.|++++|||.
T Consensus 94 ~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 94 ISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp SCHHHHHHHHHHHTCEEEESSC
T ss_pred ccCHHHHHHHHHcCCCEEECCC
Confidence 4567899999999999999994
No 225
>3cyj_A Mandelate racemase/muconate lactonizing enzyme-LI protein; structural genomics, isomerase, PSI-2; 2.30A {Rubrobacter xylanophilus dsm 9941}
Probab=34.34 E-value=1.9e+02 Score=23.53 Aligned_cols=148 Identities=12% Similarity=0.027 Sum_probs=83.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+.++..+.+..+++.|++.|=.--........+.+ +++++.-.+++.|..-... .++.+...+-+++ |
T Consensus 144 ~~~~~~~~a~~~~~~G~~~~KiKvG~~~~~d~~~v-~avr~a~g~~~~l~vDaN~----------~~~~~~a~~~~~~-l 211 (372)
T 3cyj_A 144 PLRRLQEQLGGWAAAGIPRVKMKVGREPEKDPERV-RAAREAIGESVELMVDANG----------AYTRKQALYWAGA-F 211 (372)
T ss_dssp CHHHHHHHHHHHHHTTCCEEEEECCSSGGGHHHHH-HHHHHHHCTTSEEEEECTT----------CSCHHHHHHHHHH-H
T ss_pred CHHHHHHHHHHHHHcCCCEEEEcCCCCHHHHHHHH-HHHHHHhCCCCeEEEECCC----------CCCHHHHHHHHHH-H
Confidence 45667777788889999986431100111133334 3333311223434333321 2255555444443 5
Q ss_pred hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCc---ccEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-Cchh
Q 028240 120 RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGK---IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIEN 195 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~---ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~ 195 (211)
+.+ .++.++..|-+.. -++.+.+|.++-. =-+.|=|-++...+.++ ....+++|+..+-.-. ....
T Consensus 212 ~~~----~~i~~iEqP~~~~----d~~~~~~l~~~~~~~ipIa~dE~~~~~~~~~~~--~~a~d~i~ik~~~~GGit~~~ 281 (372)
T 3cyj_A 212 ARE----AGISYLEEPVSSE----DREGLRLLRDRGPGGVAIAAGEYEWTLPQLHDL--AGCVDILQADVTRCGGITGLL 281 (372)
T ss_dssp HHH----HCCCEEECSSCTT----CHHHHHHHHHHSCTTCEEEECTTCCSHHHHHHH--HTTCSEEEECTTTTTHHHHHT
T ss_pred Hhh----cCCcEEECCCCcc----cHHHHHHHHHhCCCCCCEECCCCccCHHHHHHH--hCCCCEEecCchhhCCHHHHH
Confidence 554 1456777775443 3566666766533 22445556788888887 5667889988775321 1124
Q ss_pred hHHHHHHHcCCeee
Q 028240 196 EIVPLCRFVRLAVK 209 (211)
Q Consensus 196 ~~~~~~~~~gi~v~ 209 (211)
.+...|+++|+.++
T Consensus 282 ~i~~~A~~~gi~~~ 295 (372)
T 3cyj_A 282 RVDGICRGHQIPFS 295 (372)
T ss_dssp THHHHHHHHTCCEE
T ss_pred HHHHHHHHcCCeec
Confidence 79999999999875
No 226
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=34.27 E-value=1.3e+02 Score=21.85 Aligned_cols=89 Identities=11% Similarity=0.011 Sum_probs=60.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHh
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (211)
-+++.+++..|+..|-..+ .||.||++-+.-+++....| +.-..++ ..
T Consensus 24 I~~AA~llaqai~~~g~Iy----vfG~Ghs~~~~~e~~~~~e~--l~~~~~~--------------~~------------ 71 (170)
T 3jx9_A 24 LFDVVRLLAQALVGQGKVY----LDAYGEFEGLYPMLSDGPDQ--MKRVTKI--------------KD------------ 71 (170)
T ss_dssp HHHHHHHHHHHHHTTCCEE----EEECGGGGGGTHHHHTSTTC--CTTEEEC--------------CT------------
T ss_pred HHHHHHHHHHHHhCCCEEE----EECCCcHHHHHHHHHcccCC--ccchhhh--------------hh------------
Confidence 3677888888888777665 67888888877777754221 0000111 00
Q ss_pred hcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 121 ~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
.-.++--|.++++++.... ....+...+++++| +.-|++++
T Consensus 72 ~~~i~~~D~vii~S~Sg~n--~~~ie~A~~ake~G-~~vIaITs 112 (170)
T 3jx9_A 72 HKTLHAVDRVLIFTPDTER--SDLLASLARYDAWH-TPYSIITL 112 (170)
T ss_dssp TCCCCTTCEEEEEESCSCC--HHHHHHHHHHHHHT-CCEEEEES
T ss_pred cCCCCCCCEEEEEeCCCCC--HHHHHHHHHHHHCC-CcEEEEeC
Confidence 1156677999999986543 46888888999997 57889988
No 227
>2oda_A Hypothetical protein pspto_2114; haloacid dehalogenase, phosphonoacetaldehyde hydrolase, protein binding; HET: EPE; 1.90A {Pseudomonas syringae PV}
Probab=33.79 E-value=94 Score=22.59 Aligned_cols=34 Identities=15% Similarity=0.066 Sum_probs=21.3
Q ss_pred HHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhc
Q 028240 141 IEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (211)
Q Consensus 141 ~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (211)
+..+.+.|+.|+++|.--.| +|+.....+.++..
T Consensus 38 ~pg~~e~L~~L~~~g~~~~i-~T~~~~~~~~~~~~ 71 (196)
T 2oda_A 38 TPGAQNALKALRDQGMPCAW-IDELPEALSTPLAA 71 (196)
T ss_dssp CTTHHHHHHHHHHHTCCEEE-ECCSCHHHHHHHHT
T ss_pred CcCHHHHHHHHHHCCCEEEE-EcCChHHHHHHhcC
Confidence 34677888888888875555 44555555544443
No 228
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=33.65 E-value=1.9e+02 Score=23.30 Aligned_cols=90 Identities=12% Similarity=0.103 Sum_probs=51.3
Q ss_pred HHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc-CcccEEEeCCCCHHHHHHHhcc---CCceEEeccCCcc
Q 028240 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE-GKIKYIGLSEASPDTIRRAHAV---HPITAVQLEWSLW 189 (211)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~-G~ir~iGvs~~~~~~l~~~~~~---~~~~~~q~~~~~~ 189 (211)
.+-+.|.++|+++|++-. |.. . ..-|+.++++.+. ..++..+++..+...++.+.+. ...+.+.+..+..
T Consensus 32 ~ia~~L~~~Gv~~IE~g~---p~~--~-~~d~e~v~~i~~~~~~~~i~~l~r~~~~~i~~a~~al~~ag~~~v~i~~s~S 105 (325)
T 3eeg_A 32 IVAKALDELGVDVIEAGF---PVS--S-PGDFNSVVEITKAVTRPTICALTRAKEADINIAGEALRFAKRSRIHTGIGSS 105 (325)
T ss_dssp HHHHHHHHHTCSEEEEEC---TTS--C-HHHHHHHHHHHHHCCSSEEEEECCSCHHHHHHHHHHHTTCSSEEEEEEEECS
T ss_pred HHHHHHHHcCCCEEEEeC---CCC--C-HhHHHHHHHHHHhCCCCEEEEeecCCHHHHHHHHHhhcccCCCEEEEEeccc
Confidence 444558889999999853 321 1 2345666666664 4567777776666677765554 2223332221111
Q ss_pred c--------cC------chhhHHHHHHHcCCeee
Q 028240 190 A--------RD------IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 190 ~--------~~------~~~~~~~~~~~~gi~v~ 209 (211)
+ .. .-.+.+++|+++|+.|.
T Consensus 106 d~~~~~~l~~s~~e~l~~~~~~v~~a~~~g~~v~ 139 (325)
T 3eeg_A 106 DIHIEHKLRSTRENILEMAVAAVKQAKKVVHEVE 139 (325)
T ss_dssp HHHHC----CCCTTGGGTTHHHHHHHHTTSSEEE
T ss_pred HHHHHHHhCCCHHHHHHHHHHHHHHHHHCCCEEE
Confidence 1 11 11357889999998763
No 229
>4h3d_A 3-dehydroquinate dehydratase; structural genomics, center for structural genomics of infec diseases, csgid, TIM barrel, aldolase class I; HET: PGE SHL; 1.95A {Clostridium difficile} PDB: 3js3_A*
Probab=33.44 E-value=1.7e+02 Score=22.71 Aligned_cols=109 Identities=13% Similarity=0.051 Sum_probs=56.4
Q ss_pred CCCCeeecCCCCcccccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCCCc-CCCcHHHHHHHHHhc---C-
Q 028240 7 LQVPRVKLGTQGLEVSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTADKY-GPYTNEILLGKALKE---L- 81 (211)
Q Consensus 7 ~~~~~~~lg~~g~~vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~~Y-g~g~~E~~lG~~l~~---~- 81 (211)
.+++...+|. ..|.||.-... .+.++..+-++.+.+.|...++-=-.| .+-.+...+.+.++. .
T Consensus 8 v~v~~~~ig~---g~PkIcvpl~~--------~t~~e~l~~a~~~~~~~aD~vElR~D~l~~~~~~~~v~~~l~~lr~~~ 76 (258)
T 4h3d_A 8 VQVKNITIGE---GRPKICVPIIG--------KNKKDIIKEAKELKDACLDIIEWRVDFFENVENIKEVKEVLYELRSYI 76 (258)
T ss_dssp EEETTEEETS---SSCEEEEEECC--------SSHHHHHHHHHHHTTSSCSEEEEEGGGCTTTTCHHHHHHHHHHHHHHC
T ss_pred EEEcCEEeCC---CCCEEEEEeCC--------CCHHHHHHHHHHHhhcCCCEEEEeeccccccCCHHHHHHHHHHHHHhc
Confidence 3445566753 35677766532 366777777888888998876643333 221133344444433 1
Q ss_pred CCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEE
Q 028240 82 PRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYY 131 (211)
Q Consensus 82 ~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~ 131 (211)
..-.+.++....... + ....+.+.-.+-++...+.-.+||+|+=+
T Consensus 77 ~~lPiI~T~Rt~~EG----G-~~~~~~~~~~~ll~~~~~~~~~d~iDvEl 121 (258)
T 4h3d_A 77 HDIPLLFTFRSVVEG----G-EKLISRDYYTTLNKEISNTGLVDLIDVEL 121 (258)
T ss_dssp TTSCEEEECCCGGGT----C-SCCCCHHHHHHHHHHHHHTTCCSEEEEEG
T ss_pred CCCCEEEEEechhhC----C-CCCCCHHHHHHHHHHHHhcCCchhhHHhh
Confidence 223455554432211 1 12335554444444444444488888643
No 230
>3fst_A 5,10-methylenetetrahydrofolate reductase; TIM barrel, flavin, amino-acid biosynthesis, FAD, flavoprotein, methionine biosynthesis, NAD; HET: FAD MRY; 1.65A {Escherichia coli k-12} PDB: 3fsu_A* 1zp3_A* 1zpt_A* 1zrq_A* 1zp4_A* 2fmn_A* 2fmo_A* 1b5t_A*
Probab=33.28 E-value=1.9e+02 Score=23.17 Aligned_cols=146 Identities=12% Similarity=0.064 Sum_probs=77.3
Q ss_pred HHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHH--HHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh
Q 028240 44 GISIIKHAFSKGITFFDTADKYGPYTNEILLG--KALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (211)
Q Consensus 44 ~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG--~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (211)
..+.++.....+..+++..+.-|....+..+. ..++. +..+-....+.-. +.++..+...+... ..
T Consensus 41 l~~~~~~l~~l~p~fvsVT~gagg~~r~~t~~~a~~i~~--~~g~~~v~Hltc~---------~~~~~~l~~~L~~~-~~ 108 (304)
T 3fst_A 41 LWNSIDRLSSLKPKFVSVTYGANSGERDRTHSIIKGIKD--RTGLEAAPHLTCI---------DATPDELRTIARDY-WN 108 (304)
T ss_dssp HHHHHHHHHTTCCSEEEECCCTTSSCHHHHHHHHHHHHH--HHCCCEEEEEEST---------TSCHHHHHHHHHHH-HH
T ss_pred HHHHHHHHhcCCCCEEEEeeCCCCcchhHHHHHHHHHHH--HhCCCeeEEeecC---------CCCHHHHHHHHHHH-HH
Confidence 34557777788999999886555433454433 33332 1122222222111 23678888877776 58
Q ss_pred cCCCceeEEEeec-CCCC--CCHHHHHHHHHHHHHcCcccEEEeCCC--------CHH-HHHHHhc----cCCceEEecc
Q 028240 122 LDVEYIDLYYQHR-VDTS--VPIEETIGEMKKLVEEGKIKYIGLSEA--------SPD-TIRRAHA----VHPITAVQLE 185 (211)
Q Consensus 122 Lg~~~iDl~~lh~-~~~~--~~~~~~~~~l~~l~~~G~ir~iGvs~~--------~~~-~l~~~~~----~~~~~~~q~~ 185 (211)
+|++ +++.|-. |... ..+....+-++.+++.+- -.||+..+ +.+ ++..+.+ -..+.+-|.-
T Consensus 109 ~GI~--nILaLrGDpp~~~~~~~~~A~dLv~~ir~~~~-f~IgvA~yPE~Hp~a~~~~~d~~~Lk~KvdAGAdf~iTQ~f 185 (304)
T 3fst_A 109 NGIR--HIVALRGDLPPGSGKPEMYASDLVTLLKEVAD-FDISVAAYPEVHPEAKSAQADLLNLKRKVDAGANRAITQFF 185 (304)
T ss_dssp TTCC--EEEEECCCCC------CCCHHHHHHHHHHHCC-CEEEEEECTTCCTTCSCHHHHHHHHHHHHHHTCCEEEECCC
T ss_pred CCCC--EEEEecCCCCCCCCCCCCCHHHHHHHHHHcCC-CeEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCCEEEeCcc
Confidence 8987 4455532 2111 112234444444454443 37888754 221 3333322 2466667776
Q ss_pred CCccccCchhhHHHHHHHcCCe
Q 028240 186 WSLWARDIENEIVPLCRFVRLA 207 (211)
Q Consensus 186 ~~~~~~~~~~~~~~~~~~~gi~ 207 (211)
|+.-. -.+.++.|++.||.
T Consensus 186 fD~~~---~~~f~~~~r~~Gi~ 204 (304)
T 3fst_A 186 FDVES---YLRFRDRCVSAGID 204 (304)
T ss_dssp SCHHH---HHHHHHHHHHTTCC
T ss_pred CCHHH---HHHHHHHHHhcCCC
Confidence 66421 24678899999864
No 231
>3sma_A FRBF; N-acetyl transferase, acetyl COA binding, transferase; HET: ACO; 2.00A {Streptomyces rubellomurinus}
Probab=33.20 E-value=68 Score=25.66 Aligned_cols=53 Identities=17% Similarity=0.186 Sum_probs=40.9
Q ss_pred HHHHHHHHHhhcCCCceeEEEeecCCCCCC-----HHHHHHHHHHHH-HcCcccEEEeC
Q 028240 111 VRSCCEASLRRLDVEYIDLYYQHRVDTSVP-----IEETIGEMKKLV-EEGKIKYIGLS 163 (211)
Q Consensus 111 i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~-----~~~~~~~l~~l~-~~G~ir~iGvs 163 (211)
-++.+.+.|+.||+..=|.+++|.--.... ...++++|.+++ ++|.+-.--+|
T Consensus 23 T~~~L~~~L~~LGI~~Gd~llVHsSL~~lG~v~Gga~~vi~AL~~~vg~~GTLvmPt~t 81 (286)
T 3sma_A 23 TRDRLASDLAALGVRPGGVLLVHASLSALGWVCGGAQAVVLALQDAVGKEGTLVMPTFS 81 (286)
T ss_dssp CHHHHHHHHHHHTCCTTCEEEEEECSTTSCEETTHHHHHHHHHHHHHCTTCEEEEECCC
T ss_pred CHHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhcCCCEEEEeccC
Confidence 456788889999999999999998644332 467899998887 57877766644
No 232
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=33.13 E-value=45 Score=25.53 Aligned_cols=64 Identities=8% Similarity=0.002 Sum_probs=40.1
Q ss_pred HHHHHHHHHHHHHc-CcccEEEeCCCCH--HHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeee
Q 028240 141 IEETIGEMKKLVEE-GKIKYIGLSEASP--DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 141 ~~~~~~~l~~l~~~-G~ir~iGvs~~~~--~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~ 209 (211)
.-+++++|.++++. ++|--+|..|... ..+.+++. .++.+..|+- ...-+..+..+++.|+.++
T Consensus 92 ~~Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~---~~i~~~~~~~--~ee~~~~i~~l~~~G~~vV 158 (225)
T 2pju_A 92 GYDVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFN---LRLDQRSYIT--EEDARGQINELKANGTEAV 158 (225)
T ss_dssp HHHHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHT---CCEEEEEESS--HHHHHHHHHHHHHTTCCEE
T ss_pred HHHHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhC---CceEEEEeCC--HHHHHHHHHHHHHCCCCEE
Confidence 45788888888875 6677778877653 34444443 3455544442 2223467888888887765
No 233
>1qwg_A PSL synthase;, (2R)-phospho-3-sulfolactate synthase; beta-alpha-barrel, lyase; 1.60A {Methanocaldococcus jannaschii} SCOP: c.1.27.1
Probab=32.88 E-value=1.8e+02 Score=22.77 Aligned_cols=97 Identities=15% Similarity=0.092 Sum_probs=59.0
Q ss_pred HHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHH-HHcCcccEEEeC-------CCCHHHHHHHhccCCceEEec
Q 028240 113 SCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKL-VEEGKIKYIGLS-------EASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 113 ~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l-~~~G~ir~iGvs-------~~~~~~l~~~~~~~~~~~~q~ 184 (211)
+.++..|+-.| +|||.+-+-|=......++.++..-++ ++.|.--+.|=. .-..++..+......|+++.+
T Consensus 26 ~~~~d~Le~~g-~yID~lKfg~Gt~~l~~~~~l~eki~l~~~~gV~v~~GGTl~E~~~~qg~~~~yl~~~k~lGf~~iEi 104 (251)
T 1qwg_A 26 KFVEDYLKVCG-DYIDFVKFGWGTSAVIDRDVVKEKINYYKDWGIKVYPGGTLFEYAYSKGKFDEFLNECEKLGFEAVEI 104 (251)
T ss_dssp HHHHHHHHHHG-GGCSEEEECTTGGGGSCHHHHHHHHHHHHTTTCEEEECHHHHHHHHHTTCHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhh-hhcceEEecCceeeecCHHHHHHHHHHHHHcCCeEECCcHHHHHHHHcCcHHHHHHHHHHcCCCEEEE
Confidence 36777778888 899999999876665455555554444 455654455432 113333333333346777777
Q ss_pred cCCccccCc--hhhHHHHHHHcCCeeee
Q 028240 185 EWSLWARDI--ENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 185 ~~~~~~~~~--~~~~~~~~~~~gi~v~a 210 (211)
.-....-.. ..++++.++++|..|+.
T Consensus 105 S~G~i~l~~~~~~~~I~~~~~~G~~v~~ 132 (251)
T 1qwg_A 105 SDGSSDISLEERNNAIKRAKDNGFMVLT 132 (251)
T ss_dssp CCSSSCCCHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcccCCHHHHHHHHHHHHHCCCEEee
Confidence 655444332 24588889999887753
No 234
>3vni_A Xylose isomerase domain protein TIM barrel; D-psicose 3-epimerase, ketohexose; 1.98A {Clostridium cellulolyticum} PDB: 3vnj_A* 3vnl_A* 3vnk_A* 3vnm_A*
Probab=32.72 E-value=1.1e+02 Score=23.50 Aligned_cols=36 Identities=17% Similarity=0.133 Sum_probs=24.5
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 23 ~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
+||+-++.++..|.. ...+.++.+-+.|+..++...
T Consensus 3 kigi~~~~~~~~~~~-----~~~~~l~~~~~~G~~~vEl~~ 38 (294)
T 3vni_A 3 KHGIYYAYWEQEWEA-----DYKYYIEKVAKLGFDILEIAA 38 (294)
T ss_dssp CEEEEGGGGCSSSCC-----CHHHHHHHHHHHTCSEEEEES
T ss_pred eEEEehhhhcCCcCc-----CHHHHHHHHHHcCCCEEEecC
Confidence 356666666543321 345678888999999999774
No 235
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=32.48 E-value=1.6e+02 Score=22.23 Aligned_cols=156 Identities=13% Similarity=0.094 Sum_probs=77.0
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---HHHHHHHHHhc----CCCCcEEEEeccccccCCCcccccCCChHHH
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKE----LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~E~~lG~~l~~----~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i 111 (211)
.+.+++.++++.|.+.|++.+=.++++..+. ....+-..+.. .++...-|..+.|.. ..+.+ .+
T Consensus 21 ~~~e~~~e~i~~A~~~Gi~~i~~TdH~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i~i~~G~E--------~~~~~-~~ 91 (247)
T 2wje_A 21 KSREESKALLAESYRQGVRTIVSTSHRRKGMFETPEEKIAENFLQVREIAKEVASDLVIAYGAE--------IYYTP-DV 91 (247)
T ss_dssp SSHHHHHHHHHHHHHTTEEEEECCCEEBTTTBCCCHHHHHHHHHHHHHHHHHHCTTCEEECCCE--------EECCT-HH
T ss_pred CCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCcEEEEeeE--------EeecH-HH
Confidence 4678899999999999999988888765221 11111111211 111000122222321 11222 22
Q ss_pred HHHHHHH-Hhhc-CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC------CCCHHHHHHHhccCCceEEe
Q 028240 112 RSCCEAS-LRRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS------EASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 112 ~~~~~~s-L~~L-g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs------~~~~~~l~~~~~~~~~~~~q 183 (211)
.+.+++. +..+ |. |.+++..+. ........+++..+++.|.+--||=- ....+.+.++.+.+.. +|
T Consensus 92 ~~~l~~~~~~~l~gs---~~vl~e~~~-~~~~~~~~~~i~~i~~~g~~~vlaHp~r~~~~~~~~~~l~~l~~~G~~--lE 165 (247)
T 2wje_A 92 LDKLEKKRIPTLNDS---RYALIEFSM-NTPYRDIHSALSKILMLGITPVIAHIERYDALENNEKRVRELIDMGCY--TQ 165 (247)
T ss_dssp HHHHHTTCSCCGGGS---SEEEEECCT-TCCHHHHHHHHHHHHTTTCEEEETTGGGCGGGTTCHHHHHHHHHTTCE--EE
T ss_pred HHHHhcCCccEECCC---eEEEEeCCC-CcchHHHHHHHHHHHHCCCcEEEEehhhHHHHhhCHHHHHHHHHCCCE--EE
Confidence 2333321 2222 22 333444332 33456677788888888876544311 1234556666665432 44
Q ss_pred ccCCcc--cc--C---c-hhhHHHHHHHcCCeee
Q 028240 184 LEWSLW--AR--D---I-ENEIVPLCRFVRLAVK 209 (211)
Q Consensus 184 ~~~~~~--~~--~---~-~~~~~~~~~~~gi~v~ 209 (211)
+..+-+ .. + . ...++..|+++|+.++
T Consensus 166 iN~~s~~~~~~~g~~~~~~~~~~~~~~~~gl~~~ 199 (247)
T 2wje_A 166 VNSSHVLKPKLFGERYKFMKKRAQYFLEQDLVHV 199 (247)
T ss_dssp EEHHHHSCCCSSCCSCHHHHHHHHHHHHTTCCSE
T ss_pred EecHhhHhcCCCCCcChHHHHHHHHHHHCCCeEE
Confidence 433322 11 1 1 2457778888887654
No 236
>3r12_A Deoxyribose-phosphate aldolase; TIM beta/alpha-barrel, structural genomics, joint center for structural genomics, JCSG; HET: MSE CIT; 1.75A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 1o0y_A* 3r13_A*
Probab=32.02 E-value=62 Score=25.50 Aligned_cols=29 Identities=21% Similarity=0.273 Sum_probs=25.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPY 68 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g 68 (211)
++++...+.+.|.++|..|+=|+..|+.+
T Consensus 171 t~eei~~A~~ia~eaGADfVKTSTGf~~~ 199 (260)
T 3r12_A 171 DTEEKIAACVISKLAGAHFVKTSTGFGTG 199 (260)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSSSC
T ss_pred CHHHHHHHHHHHHHhCcCEEEcCCCCCCC
Confidence 56888999999999999999999877643
No 237
>1uwk_A Urocanate hydratase; hydrolase, urocanase, imidazolonepropionate, histidine metabolism, lyase; HET: NAD URO; 1.19A {Pseudomonas putida} SCOP: e.51.1.1 PDB: 1w1u_A* 1uwl_A* 2v7g_A*
Probab=31.49 E-value=1.1e+02 Score=26.57 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=76.5
Q ss_pred HHHHHHcCCCeEe--CCCCcC--------CCcHHHHHHHHHhc---CCCCcEEEEeccccccCCCcc---------cccC
Q 028240 48 IKHAFSKGITFFD--TADKYG--------PYTNEILLGKALKE---LPRENIQVATKFGFVELGFTS---------VIVK 105 (211)
Q Consensus 48 l~~A~~~Gi~~~D--tA~~Yg--------~g~~E~~lG~~l~~---~~r~~~~i~tK~~~~~~~~~~---------~~~~ 105 (211)
.+..-+.|+.-+= ||..|- .|.-|.++.-+-+. -.+-++|+++-++-.....+- ...+
T Consensus 118 f~~l~~~Gl~mYGQMTAGsw~YIG~QGIvqGTyeT~~~~~rk~~gg~L~G~~~lTaGLGGMgGAQplA~~mag~v~i~~E 197 (557)
T 1uwk_A 118 FNELDAKGLAMYGQMTAGSWIYIGSQGIVQGTYETFVEAGRQHYGGSLKGKWVLTAGLGGMGGAQPLAATLAGACSLNIE 197 (557)
T ss_dssp HHHHHHTTCCCBCTTTTTTTCCCTTHHHHHHHHHHHHHHHHHHTSSCCTTCEEEEECCSTTTTHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHcccccccCccccceeeecCcceeecHHHHHHHHHHHhcCCCCCceEEEEecCCccchhhHHHHHHcCceEEEEE
Confidence 5666677877432 443331 13344444422222 235678888888754322100 0012
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc-CCceEE--
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAV-- 182 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~-- 182 (211)
.++..|+ +|+.+.|+|.+ ..+++++++.+++.+++|+..+||+-..-++.++++.+. ..|+++
T Consensus 198 vd~~ri~-------~R~~~gyld~~-------~~~ldeal~~~~~a~~~~~~~SIg~~GNaadv~~~l~~~~i~~DlvtD 263 (557)
T 1uwk_A 198 SQQSRID-------FRLETRYVDEQ-------ATDLDDALVRIAKYTAEGKAISIALHGNAAEILPELVKRGVRPDMVTD 263 (557)
T ss_dssp SCHHHHH-------HHHHTTSCCEE-------CSSHHHHHHHHHHHHHTTCCCEEEEESCHHHHHHHHHHHTCCCSEECC
T ss_pred ECHHHHH-------HHHhCCCceeE-------cCCHHHHHHHHHHHHHcCCceEEEEeccHHHHHHHHHHCCCCCCCCCC
Confidence 2344333 56677888874 245789999999999999999999999888888888765 344444
Q ss_pred eccC
Q 028240 183 QLEW 186 (211)
Q Consensus 183 q~~~ 186 (211)
|...
T Consensus 264 QTSa 267 (557)
T 1uwk_A 264 QTSA 267 (557)
T ss_dssp CSCT
T ss_pred Cccc
Confidence 5544
No 238
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=31.22 E-value=1.7e+02 Score=23.93 Aligned_cols=95 Identities=14% Similarity=0.099 Sum_probs=57.4
Q ss_pred cCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChH--HHHHHHHHHHhhcCCCceeEEEeecCCCCCCHH
Q 028240 65 YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPE--YVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIE 142 (211)
Q Consensus 65 Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~--~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~ 142 (211)
+|.| +-..+++.+++...++++|.|--... .. .+.+.+.++|+.-|.++ ..+....++.+.+
T Consensus 16 ~G~g-~~~~l~~~l~~~g~~~~livtd~~~~------------~~~~g~~~~v~~~L~~~g~~~---~~~~~~~~~p~~~ 79 (387)
T 3bfj_A 16 FGPN-AISVVGERCQLLGGKKALLVTDKGLR------------AIKDGAVDKTLHYLREAGIEV---AIFDGVEPNPKDT 79 (387)
T ss_dssp ESTT-GGGGHHHHHHHTTCSEEEEECCTTTC--------------CCSSHHHHHHHHHHTTCEE---EEECCCCSSCBHH
T ss_pred ECCC-HHHHHHHHHHHcCCCEEEEEECcchh------------hccchHHHHHHHHHHHcCCeE---EEECCccCCCCHH
Confidence 4544 33457777776543566666642221 11 14566777777777643 4445555556677
Q ss_pred HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhc
Q 028240 143 ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (211)
Q Consensus 143 ~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (211)
.+-+.++.+++.|-=-=|||..-++-.+.+++.
T Consensus 80 ~v~~~~~~~~~~~~d~IIavGGGsv~D~aK~iA 112 (387)
T 3bfj_A 80 NVRDGLAVFRREQCDIIVTVGGGSPHDCGKGIG 112 (387)
T ss_dssp HHHHHHHHHHHTTCCEEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHH
Confidence 888888888888765666777666655555543
No 239
>3ijw_A Aminoglycoside N3-acetyltransferase; anthrax, COA, acyltransferase, structural genom center for structural genomics of infectious diseases; HET: MSE ACO; 1.90A {Bacillus anthracis} SCOP: c.140.1.0 PDB: 3slf_A* 3n0s_A* 3slb_A* 3n0m_A* 3kzl_A* 3e4f_A*
Probab=30.99 E-value=49 Score=26.19 Aligned_cols=52 Identities=17% Similarity=0.146 Sum_probs=38.6
Q ss_pred HHHHHHHHhhcCCCceeEEEeecCCCCC-----CHHHHHHHHHHHHH-cCcccEEEeC
Q 028240 112 RSCCEASLRRLDVEYIDLYYQHRVDTSV-----PIEETIGEMKKLVE-EGKIKYIGLS 163 (211)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~~-----~~~~~~~~l~~l~~-~G~ir~iGvs 163 (211)
++.+.+.|++||+..=|.+++|.--... ....++++|.+++. +|.+-.-..+
T Consensus 17 ~~~l~~~L~~LGi~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPt~t 74 (268)
T 3ijw_A 17 IKTITNDLRKLGLKKGMTVIVHSSLSSIGWISGGAVAVVEALMEVITEEGTIIMPTQS 74 (268)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECTGGGCCBTTHHHHHHHHHHHHHCTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 4577888899999999999999763222 25678999888875 6776655543
No 240
>3mcm_A 2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase/dihydropteroate...; folate, TIM barrel, synthase, HPPK, DHPS; 2.20A {Francisella tularensis subsp} PDB: 3mcn_A* 3mco_A*
Probab=30.66 E-value=1.6e+02 Score=24.98 Aligned_cols=100 Identities=8% Similarity=0.029 Sum_probs=58.0
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEe-ecCCC-CCCHH----HHHHHHHHHHHc-Cc---ccEEEeCCCCHHHHHHHhc-
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQ-HRVDT-SVPIE----ETIGEMKKLVEE-GK---IKYIGLSEASPDTIRRAHA- 175 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~l-h~~~~-~~~~~----~~~~~l~~l~~~-G~---ir~iGvs~~~~~~l~~~~~- 175 (211)
+.+.+.+..++.+ .=|.+.||+--- -+|.. ..+.+ .+...++.++++ .. =--|.|-+++++.++++++
T Consensus 210 ~~~~al~~A~~mv-~~GAdIIDIGgeSTrPGa~~Vs~~EE~~Rv~pvI~~l~~~~~~~~~~vpISIDT~~~~VaeaAL~~ 288 (442)
T 3mcm_A 210 DDNQRKLNLDELI-QSGAEIIDIGAESTKPDAKPISIEEEFNKLNEFLEYFKSQLANLIYKPLVSIDTRKLEVMQKILAK 288 (442)
T ss_dssp CCCHHHHHHHHHH-HHTCSEEEEECCCCCC----CCHHHHHHHHHHHHHHHHHHTTTCSSCCEEEEECCCHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH-HCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhccccCCCCeEEEeCCCHHHHHHHHhh
Confidence 3444444443332 348899999632 22321 22333 344456666651 11 1258999999999999998
Q ss_pred -cCCceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 176 -VHPITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 176 -~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
.+. +..-+..+. . ..+++++.++++|..|+.|
T Consensus 289 ~aGa-~i~INDVsg-~--~d~~m~~v~a~~g~~vVlM 321 (442)
T 3mcm_A 289 HHDI-IWMINDVEC-N--NIEQKAQLIAKYNKKYVII 321 (442)
T ss_dssp HGGG-CCEEEECCC-T--THHHHHHHHHHHTCEEEEE
T ss_pred CCCC-CEEEEcCCC-C--CChHHHHHHHHhCCeEEEE
Confidence 443 221233333 1 2457999999999999864
No 241
>3eeg_A 2-isopropylmalate synthase; 11106D, beta barrel, PSI-II, structural genomics, protein structure initiative; 2.78A {Cytophaga hutchinsonii atcc 33406}
Probab=30.56 E-value=2.1e+02 Score=22.97 Aligned_cols=25 Identities=20% Similarity=0.260 Sum_probs=20.7
Q ss_pred CCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 39 LSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 39 ~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
++.++..++++...+.|+..|+...
T Consensus 25 ~~~~~Kl~ia~~L~~~Gv~~IE~g~ 49 (325)
T 3eeg_A 25 LNTEEKIIVAKALDELGVDVIEAGF 49 (325)
T ss_dssp CCTTHHHHHHHHHHHHTCSEEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEEeC
Confidence 4557778888888899999999874
No 242
>2p0o_A Hypothetical protein DUF871; structural genomics, TIM barrel, PF05 2, protein structure initiative, midwest center for structu genomics; 2.15A {Enterococcus faecalis}
Probab=30.47 E-value=1.9e+02 Score=23.91 Aligned_cols=145 Identities=14% Similarity=0.079 Sum_probs=76.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHH---HHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILL---GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~l---G~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
..++..+.++.|-+.|++.+-|+-+...+..+..+ .+.++......+.+..-+ +|+
T Consensus 15 ~~~~~~~yi~~a~~~Gf~~IFTSL~~~e~~~~~~~~~~~~l~~~a~~~g~~vi~DI--------------sp~------- 73 (372)
T 2p0o_A 15 ITNDTIIYIKKMKALGFDGIFTSLHIPEDDTSLYRQRLTDLGAIAKAEKMKIMVDI--------------SGE------- 73 (372)
T ss_dssp CCHHHHHHHHHHHHTTCCEEEEEECCC-----CHHHHHHHHHHHHHHHTCEEEEEE--------------CHH-------
T ss_pred CHHHHHHHHHHHHHCCCCEEEccCCccCCChHHHHHHHHHHHHHHHHCCCEEEEEC--------------CHH-------
Confidence 34566699999999999999999776533232222 222211111233333333 222
Q ss_pred HHHhhcCCCceeEEEeec-------CCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccC-CceEEeccCCc
Q 028240 117 ASLRRLDVEYIDLYYQHR-------VDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVH-PITAVQLEWSL 188 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~-------~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~-~~~~~q~~~~~ 188 (211)
+|+.||.+|=|+-.++. .|...+.++... |-.. .--.+=.|+.+.+.+..++... .++-+....|.
T Consensus 74 -~l~~Lg~s~~dl~~~~~lGi~glRLD~Gf~~~eia~----ls~n-lkIeLNASti~~~~l~~l~~~~~n~~~l~a~HNF 147 (372)
T 2p0o_A 74 -ALKRAGFSFDELEPLIELGVTGLRMDYGITIEQMAH----ASHK-IDIGLNASTITLEEVAELKAHQADFSRLEAWHNY 147 (372)
T ss_dssp -HHHTTTCBTTBCHHHHHHTCCEEEECSSCCHHHHHH----HHTT-SEEEEETTTCCHHHHHHHHHTTCCGGGEEEECCC
T ss_pred -HHHHcCCCHHHHHHHHHcCCCEEEEcCCCCHHHHHH----HhcC-CEEEEECccCCHHHHHHHHHcCCChHHeEEeecc
Confidence 33444444444433332 244444333322 2222 3345667788889898888763 44445555665
Q ss_pred cccCc-------hhhHHHHHHHcCCeeeeC
Q 028240 189 WARDI-------ENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 189 ~~~~~-------~~~~~~~~~~~gi~v~a~ 211 (211)
+.+.. -...-...+++|+.+.|+
T Consensus 148 YPr~~TGLs~~~f~~~n~~~k~~Gi~t~AF 177 (372)
T 2p0o_A 148 YPRPETGIGTTFFNEKNRWLKELGLQVFTF 177 (372)
T ss_dssp CCSTTCSBCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCCCCCCCHHHHHHHHHHHHHCCCcEEEE
Confidence 55431 123456677889888773
No 243
>3dc8_A Dihydropyrimidinase; TIM-barrel, hydrolase; HET: KCX; 1.85A {Sinorhizobium meliloti}
Probab=30.16 E-value=2.5e+02 Score=23.72 Aligned_cols=111 Identities=14% Similarity=0.049 Sum_probs=53.2
Q ss_pred CHHHHHHHHHHHHHcCCCe-EeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITF-FDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~-~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
..+......+.|+..|++. +|+......-...+.+-...+...+..+-+..-.... ..+. ...+.+.+.
T Consensus 68 ~~e~~~~~~~aa~~~GvTtv~~~~~~~p~~~~~~~~~~~~~~a~~~~~d~~~~~~~~---------~~~~-~~l~el~~l 137 (490)
T 3dc8_A 68 SSDDFESGTRAALAGGTTMVVDFALPSPGQSLLEALTMWDNKSTRANCDYSFHMAIT---------WWGE-QVFNEMETI 137 (490)
T ss_dssp CSCCHHHHHHHHHHTTEEEEEEEECCC-CCCHHHHHHHHHHHTTTCSSEEEEEEECC---------SCSH-HHHHHHHHH
T ss_pred CHHHHHHHHHHHHHcCEEeecccCCCCCCcCHHHHHHHHHHHhhcccceeeeEEEEe---------cCcH-HHHHHHHHH
Confidence 3455667778889999996 4554322211234444444333222111111111111 1122 223445555
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI 160 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i 160 (211)
.++-|...+-+|+-.......+.+...++++..++.|..-.+
T Consensus 138 ~~~~G~~~~k~~~~~~~~~~~~~~~l~~~~~~a~~~g~~v~~ 179 (490)
T 3dc8_A 138 VKDKGINTFKHFMAYKGALMVDDDEMFSSFQRCAALGALPLV 179 (490)
T ss_dssp HHHSCCCEEEEESCSTTTTBCCHHHHHHHHHHHHHHTCEEEE
T ss_pred HHhCCCCEEEEEecCCCCccCCHHHHHHHHHHHHhcCCEEEE
Confidence 545676655555422111123556777888888887765433
No 244
>2okt_A OSB synthetase, O-succinylbenzoic acid synthetase; enolase, structural genom protein structure initiative, PSI, nysgrc; 1.30A {Staphylococcus aureus subsp} PDB: 2ola_A 3h70_A
Probab=29.95 E-value=2.1e+02 Score=22.87 Aligned_cols=78 Identities=9% Similarity=-0.101 Sum_probs=50.5
Q ss_pred eeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcC
Q 028240 127 IDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVR 205 (211)
Q Consensus 127 iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~g 205 (211)
.++.++..|-+..+ ++.+.+ ...+.=-+.|=|-++...+.++++....+++|+...-.-. ..-..+...|+++|
T Consensus 191 ~~i~~iEqP~~~~d----~~~~~~-~~~~ipIa~dEs~~~~~~~~~~i~~~a~d~i~~k~~~~GGit~~~~ia~~A~~~g 265 (342)
T 2okt_A 191 EQVLYIEEPFKDIS----MLDEVA-DGTIPPIALDEKATSLLDIINLIELYNVKVVVLKPFRLGGIDKVQTAIDTLKSHG 265 (342)
T ss_dssp GCEEEEECCCSSGG----GGGGSC-TTSSCCEEESTTCCCHHHHHHHHHHSCCCEEEECHHHHTSGGGHHHHHHHHHHTT
T ss_pred CCCcEEECCCCCcc----HHHHHH-hcCCCCEEecCCCCCHHHHHHHHHhCCCCEEEEChhhcCCHHHHHHHHHHHHHCC
Confidence 36777777754332 222222 2223333556667889999999888888999987654211 11246899999999
Q ss_pred Ceee
Q 028240 206 LAVK 209 (211)
Q Consensus 206 i~v~ 209 (211)
+.+.
T Consensus 266 i~~~ 269 (342)
T 2okt_A 266 AKVV 269 (342)
T ss_dssp CEEE
T ss_pred CEEE
Confidence 9874
No 245
>2nx9_A Oxaloacetate decarboxylase 2, subunit alpha; carboxyltransferase structure, B enzymes, Zn2+ binding site, TIM-barrel fold, lyase; 1.70A {Vibrio cholerae}
Probab=29.74 E-value=1.8e+02 Score=24.80 Aligned_cols=89 Identities=7% Similarity=0.030 Sum_probs=46.3
Q ss_pred HHHhhcCCCceeEEE---eecC--CCCCCHHHHHHHHHHHHHc-CcccEE---------EeCCCCHHHHH----HHhccC
Q 028240 117 ASLRRLDVEYIDLYY---QHRV--DTSVPIEETIGEMKKLVEE-GKIKYI---------GLSEASPDTIR----RAHAVH 177 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~---lh~~--~~~~~~~~~~~~l~~l~~~-G~ir~i---------Gvs~~~~~~l~----~~~~~~ 177 (211)
+.|.++|+++|..-. ++.+ -... +-|+.++.+++. ..++.. |.+++..+.++ .+.+ .
T Consensus 37 ~~L~~~Gv~~IE~g~~atF~~~~r~~~~---d~~e~l~~i~~~~~~~~l~~l~R~~N~~G~~~~~ddv~~~~v~~a~~-~ 112 (464)
T 2nx9_A 37 QQLDQIGYWSLECWGGATFDSCIRFLGE---DPWQRLRLLKQAMPNTPLQMLLRGQNLLGYRHYADDVVDTFVERAVK-N 112 (464)
T ss_dssp HHHHTSCCSEEEEEETTHHHHHHHTTCC---CHHHHHHHHHHHCSSSCEEEEECGGGTTSSSCCCHHHHHHHHHHHHH-T
T ss_pred HHHHHcCCCEEEeCcCccccchhhccCC---CHHHHHHHHHHhCCCCeEEEEeccccccCcccccchhhHHHHHHHHh-C
Confidence 457788999988864 2111 0011 345556666553 233322 44444433333 3333 3
Q ss_pred CceEEeccCCccccCchhhHHHHHHHcCCeee
Q 028240 178 PITAVQLEWSLWARDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 178 ~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~ 209 (211)
.++.+.+..++.+...-...+++++++|..|.
T Consensus 113 Gvd~i~if~~~sd~~ni~~~i~~ak~~G~~v~ 144 (464)
T 2nx9_A 113 GMDVFRVFDAMNDVRNMQQALQAVKKMGAHAQ 144 (464)
T ss_dssp TCCEEEECCTTCCTHHHHHHHHHHHHTTCEEE
T ss_pred CcCEEEEEEecCHHHHHHHHHHHHHHCCCEEE
Confidence 44555554444443323467888888888764
No 246
>3fxg_A Rhamnonate dehydratase; structural gemomics, enolase superfamily, NYSGXRC, target 9265J, lyase, structural genomics, PSI-2; 1.90A {Gibberella zeae ph-1} PDB: 2p0i_A
Probab=29.71 E-value=46 Score=28.47 Aligned_cols=66 Identities=11% Similarity=0.012 Sum_probs=48.2
Q ss_pred HHHHHHHHHHcC-cc-cEEEeCCCCHHHHHHHhccCCceEEeccCCcccc-CchhhHHHHHHHcCCeee
Q 028240 144 TIGEMKKLVEEG-KI-KYIGLSEASPDTIRRAHAVHPITAVQLEWSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 144 ~~~~l~~l~~~G-~i-r~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
-++.+.+|+++- .+ -+.|=+-++...+.++++....+++|+..+-.=- ..-..+...|+.+|+.+.
T Consensus 255 d~~~la~L~~~~~~iPIA~gEs~~s~~d~~~li~~~avDiiq~d~~~~GGItea~kIa~lA~a~Gv~v~ 323 (455)
T 3fxg_A 255 DTDGFALIKRAHPTVKFTTGEHEYSRYGFRKLVEGRNLDIIQPDVMWLGGLTELLKVAALAAAYDVPVV 323 (455)
T ss_dssp GGGGHHHHHHHCTTSEEEECTTCCHHHHHHHHHTTCCCSEECCCTTTSSCHHHHHHHHHHHHTTTCCBC
T ss_pred hHHHHHHHHHhCCCCeEECCCccCCHHHHHHHHHcCCCCEEEECccccCCHHHHHHHHHHHHHcCCEEE
Confidence 366677777653 23 4567777888999999998889999998875321 123468999999999874
No 247
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=29.46 E-value=1.7e+02 Score=21.69 Aligned_cols=149 Identities=15% Similarity=0.113 Sum_probs=70.2
Q ss_pred HHHHHHHHHcCCCeEeCCCCcC--CCcHH-HHHHHHHhcCCC--Cc--EEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 45 ISIIKHAFSKGITFFDTADKYG--PYTNE-ILLGKALKELPR--EN--IQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 45 ~~~l~~A~~~Gi~~~DtA~~Yg--~g~~E-~~lG~~l~~~~r--~~--~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
.++++.|.+.|++.+=.+++.. .|..+ ..+ +.++...+ .+ ++...-+..... .+ ..+...+
T Consensus 21 ~e~v~~A~~~Gl~~iaiTDH~~~~~~~~~~~~~-~~~~~~~~~~~~i~v~~G~Ei~~~~~-~~--~~~~~~~-------- 88 (245)
T 1m65_A 21 SDYIAQAKQKGIKLFAITDHGPDMEDAPHHWHF-INMRIWPRVVDGVGILRGIEANIKNV-DG--EIDCSGK-------- 88 (245)
T ss_dssp HHHHHHHHHHTCCEEEEEEECTTSTTCCCTHHH-HGGGGSCSEETTEEEEEEEEEEBCST-TC--CBSCCHH--------
T ss_pred HHHHHHHHHCCCCEEEECCCCCCCCCCcHHHHH-HHHHHHHHhcCCCeEEEEEEeeeeCC-CC--chhHHHH--------
Confidence 3889999999999987776654 11111 122 22232211 12 333333322110 00 0111111
Q ss_pred HHhhcCCCceeEEEeecCCC-CCCHHHHHHHHHHHHHcCcccEEEeCC-----CCHH-HHHHHhccCCceEEeccCCccc
Q 028240 118 SLRRLDVEYIDLYYQHRVDT-SVPIEETIGEMKKLVEEGKIKYIGLSE-----ASPD-TIRRAHAVHPITAVQLEWSLWA 190 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~-~~~~~~~~~~l~~l~~~G~ir~iGvs~-----~~~~-~l~~~~~~~~~~~~q~~~~~~~ 190 (211)
.+++| +++ +..+|.+.. .......++.+.+..+.|.+--++=-. ...+ .+.++.+.. ..+|+..+.+.
T Consensus 89 ~~~~l--d~v-i~~~h~~~~~~~~~~~~~~~~~~~i~~g~~~vlaHp~~~~~~~~~~~~~~~~~~~g--~~iEvn~~~~~ 163 (245)
T 1m65_A 89 MFDSL--DLI-IAGFHEPVFAPHDKATNTQAMIATIASGNVHIISHPGNPKYEIDVKAVAEAAAKHQ--VALEINNSSFL 163 (245)
T ss_dssp HHHHC--SEE-EEECCTTTSCCCCHHHHHHHHHHHHHTSCCSEECCTTCTTSCCCHHHHHHHHHHHT--CEEEEETTC--
T ss_pred HHhhC--CEE-EEeecCCccCcchHHHHHHHHHHHHhCCCCCEEECCCCccchhHHHHHHHHHHHcC--CEEEEECCCCc
Confidence 22332 333 334566532 223334455555555588877665211 1223 344444434 35666665542
Q ss_pred ------cCchhhHHHHHHHcCCeeee
Q 028240 191 ------RDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 191 ------~~~~~~~~~~~~~~gi~v~a 210 (211)
......++..|+++|+.+++
T Consensus 164 ~~~~g~~~~~~~~~~~~~~~g~~~~~ 189 (245)
T 1m65_A 164 HSRKGSEDNCREVAAAVRDAGGWVAL 189 (245)
T ss_dssp --------CHHHHHHHHHHHTCCEEE
T ss_pred ccCCCCCCchHHHHHHHHHcCCEEEE
Confidence 12335688999999987653
No 248
>3lab_A Putative KDPG (2-keto-3-deoxy-6-phosphogluconate) aldolase; unknown function, aldolase superfamily, class I aldolase, KDPG aldolase domain; 1.84A {Oleispira antarctica} PDB: 3vcr_A
Probab=29.07 E-value=96 Score=23.64 Aligned_cols=76 Identities=11% Similarity=0.175 Sum_probs=45.3
Q ss_pred HHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC-CCHHHHHHHhccC-CceEEeccCCccccC
Q 028240 115 CEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE-ASPDTIRRAHAVH-PITAVQLEWSLWARD 192 (211)
Q Consensus 115 ~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~-~~~~~l~~~~~~~-~~~~~q~~~~~~~~~ 192 (211)
+-+.|-.-|+..+.+= +..| ..++.++.++++=---.||..+ .++++++++++.+ .|.+. +.
T Consensus 30 ~a~al~~gGi~~iEvt-~~t~-------~a~~~I~~l~~~~p~~~IGAGTVlt~~~a~~ai~AGA~fivs--------P~ 93 (217)
T 3lab_A 30 MAKALVAGGVHLLEVT-LRTE-------AGLAAISAIKKAVPEAIVGAGTVCTADDFQKAIDAGAQFIVS--------PG 93 (217)
T ss_dssp HHHHHHHTTCCEEEEE-TTST-------THHHHHHHHHHHCTTSEEEEECCCSHHHHHHHHHHTCSEEEE--------SS
T ss_pred HHHHHHHcCCCEEEEe-CCCc-------cHHHHHHHHHHHCCCCeEeeccccCHHHHHHHHHcCCCEEEe--------CC
Confidence 3444555577666551 1111 3455555555541124677777 4788999888764 44322 22
Q ss_pred chhhHHHHHHHcCC
Q 028240 193 IENEIVPLCRFVRL 206 (211)
Q Consensus 193 ~~~~~~~~~~~~gi 206 (211)
...+++++|+++|+
T Consensus 94 ~~~evi~~~~~~~v 107 (217)
T 3lab_A 94 LTPELIEKAKQVKL 107 (217)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CcHHHHHHHHHcCC
Confidence 34689999999998
No 249
>2i2x_B MTAC, methyltransferase 1; TIM barrel and helix bundle (MTAB), rossman fold and helix B (MTAC); HET: B13; 2.50A {Methanosarcina barkeri}
Probab=28.82 E-value=1.7e+02 Score=22.52 Aligned_cols=57 Identities=9% Similarity=-0.042 Sum_probs=31.8
Q ss_pred HHHHHcCc-ccEEEeCCCCHHHHHHHhccCCceEEeccCCccccC-chhhHHHHHHHcCC
Q 028240 149 KKLVEEGK-IKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD-IENEIVPLCRFVRL 206 (211)
Q Consensus 149 ~~l~~~G~-ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~-~~~~~~~~~~~~gi 206 (211)
.-|...|. |.++|.. ..++.+.+.....+++++-+.+..-..- .-..+++.+++.|.
T Consensus 145 ~~L~~~G~~Vi~LG~~-vp~e~l~~~~~~~~~d~V~lS~l~~~~~~~~~~~i~~l~~~~~ 203 (258)
T 2i2x_B 145 ALLRANGYNVVDLGRD-VPAEEVLAAVQKEKPIMLTGTALMTTTMYAFKEVNDMLLENGI 203 (258)
T ss_dssp HHHHHTTCEEEEEEEE-CCSHHHHHHHHHHCCSEEEEECCCTTTTTHHHHHHHHHHTTTC
T ss_pred HHHHHCCCEEEECCCC-CCHHHHHHHHHHcCCCEEEEEeeccCCHHHHHHHHHHHHhcCC
Confidence 34556675 5677776 3556665555555566666655432221 12356667766653
No 250
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=28.51 E-value=57 Score=26.37 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=21.1
Q ss_pred ceEEeccCCccccC----chhhHHHHHHHcCCeeee
Q 028240 179 ITAVQLEWSLWARD----IENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 179 ~~~~q~~~~~~~~~----~~~~~~~~~~~~gi~v~a 210 (211)
|++++++-|-+.-. ..++++++|++.|+.|.|
T Consensus 98 FtSVMiDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEa 133 (307)
T 3n9r_A 98 FTSVMIDASHHAFEENLELTSKVVKMAHNAGVSVEA 133 (307)
T ss_dssp CSEEEECCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCcEEEECCCCCHHHHHHHHHHHHHHHHHcCCeEEE
Confidence 56666666644322 245788888888888765
No 251
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=28.04 E-value=81 Score=20.43 Aligned_cols=60 Identities=7% Similarity=-0.002 Sum_probs=37.5
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHcC---cccEEEeCCCCHHHHHHHhccCCceEEeccCC
Q 028240 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEEG---KIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187 (211)
Q Consensus 125 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 187 (211)
...|++++...-+..+ .++.++.+++.. .+.-+-++..+...+.++++.+..+++.-+++
T Consensus 49 ~~~dlii~d~~l~~~~---g~~~~~~l~~~~~~~~~~ii~~~~~~~~~~~~~~~~g~~~~l~kP~~ 111 (132)
T 3lte_A 49 FEPAIMTLDLSMPKLD---GLDVIRSLRQNKVANQPKILVVSGLDKAKLQQAVTEGADDYLEKPFD 111 (132)
T ss_dssp TCCSEEEEESCBTTBC---HHHHHHHHHTTTCSSCCEEEEECCSCSHHHHHHHHHTCCEEECSSCC
T ss_pred cCCCEEEEecCCCCCC---HHHHHHHHHhcCccCCCeEEEEeCCChHHHHHHHHhChHHHhhCCCC
Confidence 3579999876544332 456666676654 35555566666566777777766666665555
No 252
>4ab4_A Xenobiotic reductase B; oxidoreductase, OLD yellow enzyme; HET: FMN TNL EDO; 1.50A {Pseudomonas putida KT2440}
Probab=28.00 E-value=2.5e+02 Score=22.99 Aligned_cols=63 Identities=14% Similarity=0.019 Sum_probs=35.4
Q ss_pred HHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEe
Q 028240 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q 183 (211)
...+-+.|+..|+++|++ |......+ . +.++++.=.+--|++..++++..+++++....+.+.
T Consensus 244 ~~~la~~l~~~Gvd~i~v---~~~~~~~~---~---~~~ik~~~~iPvi~~Ggit~e~a~~~l~~g~aD~V~ 306 (362)
T 4ab4_A 244 FTYVARELGKRGIAFICS---REREADDS---I---GPLIKEAFGGPYIVNERFDKASANAALASGKADAVA 306 (362)
T ss_dssp HHHHHHHHHHTTCSEEEE---ECCCCTTC---C---HHHHHHHHCSCEEEESSCCHHHHHHHHHTTSCSEEE
T ss_pred HHHHHHHHHHhCCCEEEE---CCCCCCHH---H---HHHHHHHCCCCEEEeCCCCHHHHHHHHHcCCccEEE
Confidence 345666778889877665 55432111 1 223333223456666667777887777765555443
No 253
>4a3u_A NCR, NADH\:flavin oxidoreductase/NADH oxidase; HET: FMN; 1.70A {Zymomonas mobilis}
Probab=27.37 E-value=2.5e+02 Score=22.80 Aligned_cols=23 Identities=26% Similarity=0.404 Sum_probs=15.0
Q ss_pred hHHHHHHHHHHHhhcCCCceeEE
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLY 130 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~ 130 (211)
.......+-+.+..++++++++-
T Consensus 239 ~~~~~~~~~~~~~~~~~~~i~~~ 261 (358)
T 4a3u_A 239 PEQVFIPAAKMLSDLDIAFLGMR 261 (358)
T ss_dssp THHHHHHHHHHHHHHTCSEEEEE
T ss_pred hHHHHHHHHHhhhccCccccccc
Confidence 33444455667788898887764
No 254
>3qc0_A Sugar isomerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-biology,; HET: UNL PG4; 1.45A {Sinorhizobium meliloti} PDB: 3ju2_A
Probab=26.68 E-value=63 Score=24.49 Aligned_cols=36 Identities=14% Similarity=0.114 Sum_probs=24.2
Q ss_pred cccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 21 VSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 21 vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
..++|+.++.+.. ..+ ..+.++.+-+.|+..++...
T Consensus 4 ~~~lg~~~~~~~~----~~~---~~~~l~~~~~~G~~~vEl~~ 39 (275)
T 3qc0_A 4 VEGLSINLATIRE----QCG---FAEAVDICLKHGITAIAPWR 39 (275)
T ss_dssp CTTEEEEGGGGTT----TCC---HHHHHHHHHHTTCCEEECBH
T ss_pred cccceeeeeeccC----CCC---HHHHHHHHHHcCCCEEEecc
Confidence 3467777776522 123 34568888899999999765
No 255
>2nyg_A YOKD protein; PFAM02522, NYSGXRC, aminoglycoside 3-N- acetyltransferase, PSI-2, structural genomics, protein structure initiative; HET: COA; 2.60A {Bacillus subtilis} SCOP: c.140.1.2
Probab=26.46 E-value=71 Score=25.29 Aligned_cols=52 Identities=19% Similarity=0.124 Sum_probs=38.0
Q ss_pred HHHHHHHHhhcCCCceeEEEeecCCCC-----CCHHHHHHHHHHHHH-cCcccEEEeC
Q 028240 112 RSCCEASLRRLDVEYIDLYYQHRVDTS-----VPIEETIGEMKKLVE-EGKIKYIGLS 163 (211)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~-----~~~~~~~~~l~~l~~-~G~ir~iGvs 163 (211)
++.+.+.|+.||+..=|.+++|.--.. .....++++|.+++- +|.+-.=.++
T Consensus 15 ~~~L~~~L~~LGI~~Gd~llVHsSl~~lG~v~gg~~~vi~AL~~~vg~~GTLvmPtft 72 (273)
T 2nyg_A 15 KQSITEDLKALGLKKGMTVLVHSSLSSIGWVNGGAVAVIQALIDVVTEEGTIVMPSQS 72 (273)
T ss_dssp HHHHHHHHHHHTCCTTCEEEEEECSGGGCCBTTHHHHHHHHHHHHHTTTSEEEEECCC
T ss_pred HHHHHHHHHHcCCCCCCEEEEEechHHhCCCCCCHHHHHHHHHHHhCCCCeEEEeccc
Confidence 456788889999999999999975322 235678999988774 6766554443
No 256
>1vpy_A Protein (hypothetical protein EF0366); TIM alpha/beta barrel fold, structural genomics, joint cente structural genomics, JCSG; 2.52A {Enterococcus faecalis} SCOP: c.1.32.1 PDB: 1ztv_A
Probab=26.38 E-value=2.4e+02 Score=22.26 Aligned_cols=124 Identities=15% Similarity=0.070 Sum_probs=68.7
Q ss_pred cccceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeC-CCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCC
Q 028240 21 VSKLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDT-ADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGF 99 (211)
Q Consensus 21 vs~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~Dt-A~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~ 99 (211)
+-.||.++|+... |- .-...+-|+...+ -++.++. +..|..= +++.+.++.++. .+++..+.|........
T Consensus 13 ~i~iG~sgWs~~~-w~----~~~~~~~L~~Ya~-~F~tVEiNsTFY~~p-~~~t~~~W~~~t-P~~F~F~vKa~r~iTH~ 84 (289)
T 1vpy_A 13 MIRLGLTSFSEHD-YL----TGKKRSTLYEYAS-HLPLVEMDTAYYGIP-PKERVAEWVKAV-PENFRFVMKVYSGISCQ 84 (289)
T ss_dssp EEEEEESTTC---------------CCHHHHHH-HCSEEEECHHHHSCC-CHHHHHHHHHTS-CTTCEEEEECCTTTTTC
T ss_pred eEEEecCCCCChh-hc----CCChhhHHHHHHh-hCCEEEECccccCCC-CHHHHHHHHHhC-CCCcEEEEEechheecc
Confidence 4466777776532 21 1111223444433 2666554 3356532 778888898874 57899999997543322
Q ss_pred cccc-cCCChHHHHHHHHHHHhhc--CCCceeEEEeecCCCCCCHHHHHHHHHHHHH
Q 028240 100 TSVI-VKGTPEYVRSCCEASLRRL--DVEYIDLYYQHRVDTSVPIEETIGEMKKLVE 153 (211)
Q Consensus 100 ~~~~-~~~s~~~i~~~~~~sL~~L--g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~ 153 (211)
.... .....+.+-+.+.+.++-| + +++..+++.-|..-..-.+.++.|..+.+
T Consensus 85 ~rl~~~~~~~~~~~~~F~~~~~pL~~~-~kLG~vL~Q~Ppsf~~~~~~~~~L~~~~~ 140 (289)
T 1vpy_A 85 GEWQTYYASEEEMITAFLESMAPLIES-KKLFAFLVQFSGTFGCTKENVAYLQKIRH 140 (289)
T ss_dssp SCGGGTCSSHHHHHHHHHHHTHHHHTT-TCEEEEEEECCTTCCSCHHHHHHHHHHHH
T ss_pred cccCCccchhHHHHHHHHHHHHhhccC-CCEEEEEEEcCCCCCCCHHHHHHHHHHHH
Confidence 1100 0112344445666778888 5 78999999988654333456666766654
No 257
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=26.26 E-value=80 Score=23.91 Aligned_cols=26 Identities=19% Similarity=0.371 Sum_probs=22.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCc
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKY 65 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Y 65 (211)
++++...+.+.+.++|+.++.|+..+
T Consensus 130 ~~~~~~~~a~~a~eaGad~I~tstg~ 155 (225)
T 1mzh_A 130 NEEEIKKAVEICIEAGADFIKTSTGF 155 (225)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSC
T ss_pred CHHHHHHHHHHHHHhCCCEEEECCCC
Confidence 56778899999999999999988655
No 258
>3ox4_A Alcohol dehydrogenase 2; iron, NAD, oxidoreductase; HET: NAD; 2.00A {Zymomonas mobilis} PDB: 3owo_A*
Probab=25.99 E-value=2.5e+02 Score=22.99 Aligned_cols=94 Identities=15% Similarity=0.033 Sum_probs=59.0
Q ss_pred cCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHH
Q 028240 65 YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEET 144 (211)
Q Consensus 65 Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~ 144 (211)
+|.| +...+++.+++...++++|.|--... ...+.+.+.++|+.-|+++ ..+....++...+.+
T Consensus 14 ~G~g-~~~~l~~~~~~~g~~~~liVtd~~~~------------~~g~~~~v~~~L~~~gi~~---~~~~~v~~~p~~~~v 77 (383)
T 3ox4_A 14 MGEG-SLEKAIKDLNGSGFKNALIVSDAFMN------------KSGVVKQVADLLKAQGINS---AVYDGVMPNPTVTAV 77 (383)
T ss_dssp ESTT-HHHHHHHTTTTSCCCEEEEEEEHHHH------------HTTHHHHHHHHHHTTTCEE---EEEEEECSSCBHHHH
T ss_pred ECCC-HHHHHHHHHHHcCCCEEEEEECCchh------------hCchHHHHHHHHHHcCCeE---EEECCccCCCCHHHH
Confidence 3544 56678888887654566655532221 1125667778888777654 344555556667778
Q ss_pred HHHHHHHHHcCcccEEEeCCCCHHHHHHHh
Q 028240 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (211)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (211)
-+.++.+++.|-=-=|||..-++-.+.+++
T Consensus 78 ~~~~~~~~~~~~D~IIavGGGsv~D~aK~i 107 (383)
T 3ox4_A 78 LEGLKILKDNNSDFVISLGGGSPHDCAKAI 107 (383)
T ss_dssp HHHHHHHHHHTCSEEEEEESHHHHHHHHHH
T ss_pred HHHHHHHHhcCcCEEEEeCCcHHHHHHHHH
Confidence 888888887765555777776666665554
No 259
>3uhj_A Probable glycerol dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.34A {Sinorhizobium meliloti}
Probab=25.98 E-value=2.1e+02 Score=23.62 Aligned_cols=103 Identities=13% Similarity=-0.002 Sum_probs=56.2
Q ss_pred cCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHH
Q 028240 65 YGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEET 144 (211)
Q Consensus 65 Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~ 144 (211)
+|.| +-..+++.++... ++++|.|--. ..+.+.+.+.++|+. |+++ .| ..+..+.+.+.+
T Consensus 36 ~G~g-~l~~l~~~l~~~g-~r~liVtd~~-------------~~~~~~~~v~~~L~~-g~~~--~~--~~~~~~p~~~~v 95 (387)
T 3uhj_A 36 QRAG-EIDKLAAYLAPLG-KRALVLIDRV-------------LFDALSERIGKSCGD-SLDI--RF--ERFGGECCTSEI 95 (387)
T ss_dssp ECTT-TTTTTHHHHGGGC-SEEEEEECTT-------------THHHHHHHC-------CCEE--EE--EECCSSCSHHHH
T ss_pred EcCC-HHHHHHHHHHHcC-CEEEEEECch-------------HHHHHHHHHHHHHHc-CCCe--EE--EEcCCCCCHHHH
Confidence 3544 4445788887755 5565555322 233467778888888 8654 22 233344456677
Q ss_pred HHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc-CCceEEeccCC
Q 028240 145 IGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWS 187 (211)
Q Consensus 145 ~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~~ 187 (211)
-+..+.+++.|-=-=||+..-++-.+.+++.. ..+.+++++-.
T Consensus 96 ~~~~~~~~~~~~d~IIavGGGs~~D~AK~iA~~~~~p~i~IPTT 139 (387)
T 3uhj_A 96 ERVRKVAIEHGSDILVGVGGGKTADTAKIVAIDTGARIVIAPTI 139 (387)
T ss_dssp HHHHHHHHHHTCSEEEEESSHHHHHHHHHHHHHTTCEEEECCSS
T ss_pred HHHHHHHhhcCCCEEEEeCCcHHHHHHHHHHHhcCCCEEEecCc
Confidence 77777777777555678888777777766543 22334444443
No 260
>2q02_A Putative cytoplasmic protein; structural genomics, joint CEN structural genomics, JCSG, protein structure initiative; 2.40A {Salmonella typhimurium LT2} SCOP: c.1.15.4
Probab=25.92 E-value=79 Score=23.87 Aligned_cols=63 Identities=5% Similarity=0.027 Sum_probs=31.7
Q ss_pred HHHHHHHHcCcccEEEeCC----------CCHHHHHHHhccCCceE--EeccCCc--ccc---CchhhHHHHHHHcCCee
Q 028240 146 GEMKKLVEEGKIKYIGLSE----------ASPDTIRRAHAVHPITA--VQLEWSL--WAR---DIENEIVPLCRFVRLAV 208 (211)
Q Consensus 146 ~~l~~l~~~G~ir~iGvs~----------~~~~~l~~~~~~~~~~~--~q~~~~~--~~~---~~~~~~~~~~~~~gi~v 208 (211)
+.++.+++.| ...|-+.. ...+.+.++++...+.+ +...+.+ .+. ..-+..+++|++.|..+
T Consensus 23 ~~l~~~~~~G-~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~~gl~~~~~~~~~~~~~~~~~~~~~~~~~i~~a~~lG~~~ 101 (272)
T 2q02_A 23 AFFRLVKRLE-FNKVELRNDMPSGSVTDDLNYNQVRNLAEKYGLEIVTINAVYPFNQLTEEVVKKTEGLLRDAQGVGARA 101 (272)
T ss_dssp HHHHHHHHTT-CCEEEEETTSTTSSTTTTCCHHHHHHHHHHTTCEEEEEEEETTTTSCCHHHHHHHHHHHHHHHHHTCSE
T ss_pred HHHHHHHHcC-CCEEEeeccccccccccccCHHHHHHHHHHcCCeEEechhhhccCCcHHHHHHHHHHHHHHHHHhCCCE
Confidence 4445555555 34554442 23556666666554433 3332322 211 11245778888888765
Q ss_pred e
Q 028240 209 K 209 (211)
Q Consensus 209 ~ 209 (211)
+
T Consensus 102 v 102 (272)
T 2q02_A 102 L 102 (272)
T ss_dssp E
T ss_pred E
Confidence 5
No 261
>4e4f_A Mannonate dehydratase; magnesium binding, enzyme function initiative, isomerase; 2.00A {Pectobacterium carotovorum subsp}
Probab=25.79 E-value=2.9e+02 Score=23.03 Aligned_cols=93 Identities=8% Similarity=-0.009 Sum_probs=58.7
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCccc-EEEeCCCCHHHHHHHhccCCceEEecc
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIK-YIGLSEASPDTIRRAHAVHPITAVQLE 185 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir-~iGvs~~~~~~l~~~~~~~~~~~~q~~ 185 (211)
+.+...+- -+.|+.++++++ ..|-+.. .++.+.++++.-.+. +.|=+-++...++++++....+++|+.
T Consensus 240 ~~~~A~~~-~~~L~~~~i~~i-----EeP~~~~----d~~~~~~l~~~~~iPIa~dE~~~~~~~~~~~i~~ga~d~v~~k 309 (426)
T 4e4f_A 240 TPIEAARF-GKSVEDYRLFWM-----EDPTPAE----NQACFRLIRQHTVTPIAVGEVFNSIWDCKQLIEEQLIDYIRTT 309 (426)
T ss_dssp CHHHHHHH-HHHTGGGCCSEE-----ECCSCCS----SGGGGHHHHTTCCSCEEECTTCCSGGGTHHHHHTTCCSEECCC
T ss_pred CHHHHHHH-HHHHhhcCCCEE-----ECCCChH----HHHHHHHHHhcCCCCEEeCCCcCCHHHHHHHHHcCCCCEEEeC
Confidence 44443332 235666665544 4554322 355667777664443 344455788889999988889999988
Q ss_pred CCcccc-CchhhHHHHHHHcCCeee
Q 028240 186 WSLWAR-DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 186 ~~~~~~-~~~~~~~~~~~~~gi~v~ 209 (211)
.+-.-. .....+...|+++|+.+.
T Consensus 310 ~~~~GGit~~~~ia~~A~~~gi~v~ 334 (426)
T 4e4f_A 310 ITHAGGITGMRRIADFASLYQVRTG 334 (426)
T ss_dssp TTTTTHHHHHHHHHHHHHTTTCEEE
T ss_pred ccccCCHHHHHHHHHHHHHcCCEEe
Confidence 775321 113468999999999875
No 262
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=25.32 E-value=2.4e+02 Score=21.88 Aligned_cols=52 Identities=17% Similarity=0.161 Sum_probs=33.4
Q ss_pred cceeccccCCCCCCCCCCHHHHHHHHHHHHHcCCCeEeCCC-----CcCCCcHHHHHHHHHhc
Q 028240 23 KLGYGCMSLSGCYNSPLSEEDGISIIKHAFSKGITFFDTAD-----KYGPYTNEILLGKALKE 80 (211)
Q Consensus 23 ~lg~G~~~~~~~~~~~~~~~~~~~~l~~A~~~Gi~~~DtA~-----~Yg~g~~E~~lG~~l~~ 80 (211)
++|+-++.+..... +....+.++.+-+.|++.++... .|+ ..-+.+.+.+++
T Consensus 14 ~~g~~~~s~~~~~~----~~~~~~~l~~~a~~G~~~VEl~~~~~~~~~~--~~~~~~~~~l~~ 70 (303)
T 3l23_A 14 EIGLQIYSLSQELY----KGDVAANLRKVKDMGYSKLELAGYGKGAIGG--VPMMDFKKMAED 70 (303)
T ss_dssp CCEEEGGGGGGGGG----SSCHHHHHHHHHHTTCCEEEECCEETTEETT--EEHHHHHHHHHH
T ss_pred ceEEEEEEchhhhc----cCCHHHHHHHHHHcCCCEEEeccccCcccCC--CCHHHHHHHHHH
Confidence 56777777643211 01356789999999999999875 333 244556666664
No 263
>3kip_A 3-dehydroquinase, type II; lyase; 2.95A {Candida albicans}
Probab=25.11 E-value=1.4e+02 Score=21.78 Aligned_cols=80 Identities=10% Similarity=0.039 Sum_probs=53.1
Q ss_pred CCChHHHHHHHHHHH--hhcCCCceeEEEeecCCCCCCHHHHHHHHHHHH-H--cCcccEEEeCCCCHHHHHHHhccCCc
Q 028240 105 KGTPEYVRSCCEASL--RRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLV-E--EGKIKYIGLSEASPDTIRRAHAVHPI 179 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL--~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~-~--~G~ir~iGvs~~~~~~l~~~~~~~~~ 179 (211)
..+.+.|.+.+.+.- ..+|++ ++++|-. .-.+.++++.+.. + +|.|--=|--+++.-.+.+++....+
T Consensus 38 ~~TL~di~~~l~~~a~~~~~g~~-v~~~QSN------~EGeLId~Ih~A~~~~~dgIIINpgAyTHtSvAlrDAL~~v~~ 110 (167)
T 3kip_A 38 TTSLSDIEQAAIEQAKLKNNDSE-VLVFQSN------TEGFIIDRIHEAKRQGVGFVVINAGAYTHTSVGIRDALLGTAI 110 (167)
T ss_dssp SCCHHHHHHHHHHHHHHTCSSCE-EEEEECS------CHHHHHHHHHHHHHTTCCEEEEECGGGGGTCHHHHHHHHHTTC
T ss_pred cCCHHHHHHHHHHHhccccCCcE-EEEEecC------CHHHHHHHHHHhhhcCccEEEEccccceeccHHHHHHHHhcCC
Confidence 347788999999888 888864 6776622 1236788887765 2 23444445556666677777776666
Q ss_pred eEEeccCCcccc
Q 028240 180 TAVQLEWSLWAR 191 (211)
Q Consensus 180 ~~~q~~~~~~~~ 191 (211)
-++.+..|-...
T Consensus 111 P~VEVHiSNiha 122 (167)
T 3kip_A 111 PFIEVHITNVHQ 122 (167)
T ss_dssp CEEEEESSCGGG
T ss_pred CEEEEEcCCccc
Confidence 788888876554
No 264
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=25.01 E-value=84 Score=25.07 Aligned_cols=119 Identities=14% Similarity=0.248 Sum_probs=61.8
Q ss_pred HHHHHHHHHcCCCe--EeCCCCcCCCcHHHH--HHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHh
Q 028240 45 ISIIKHAFSKGITF--FDTADKYGPYTNEIL--LGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLR 120 (211)
Q Consensus 45 ~~~l~~A~~~Gi~~--~DtA~~Yg~g~~E~~--lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~ 120 (211)
.++|+.|.+.|+-. |.+-. .|.+ +=++.++ .+..++|+.--+.... ...+.+...+....+
T Consensus 7 ~~ll~~A~~~~yAv~AfNv~n------~e~~~avl~AAe~-~~sPvIlq~s~~~~~y--------~g~~~~~~~v~~~a~ 71 (286)
T 1gvf_A 7 KYLLQDAQANGYAVPAFNIHN------AETIQAILEVCSE-MRSPVILAGTPGTFKH--------IALEEIYALCSAYST 71 (286)
T ss_dssp HHHHHHHHHHTCCEEEEECCS------HHHHHHHHHHHHH-HTCCCEEEECTTHHHH--------SCHHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCEEEEEeeCC------HHHHHHHHHHHHH-hCCCEEEECChhHHhh--------cCHHHHHHHHHHHHH
Confidence 47788888887653 44332 2221 1122222 2456666654432111 134666777777777
Q ss_pred hcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhccCCceEEeccCCccccC----chhh
Q 028240 121 RLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAVHPITAVQLEWSLWARD----IENE 196 (211)
Q Consensus 121 ~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~~~~~~----~~~~ 196 (211)
+-++. +-|=+=|..+ ++.+.++++ . .|++++++-|-+.-. ..++
T Consensus 72 ~~~VP-ValHlDHg~~----~e~i~~ai~----~-----------------------GFtSVMiDgS~lp~eeNi~~Tk~ 119 (286)
T 1gvf_A 72 TYNMP-LALHLDHHES----LDDIRRKVH----A-----------------------GVRSAMIDGSHFPFAENVKLVKS 119 (286)
T ss_dssp HTTSC-BEEEEEEECC----HHHHHHHHH----T-----------------------TCCEEEECCTTSCHHHHHHHHHH
T ss_pred hCCCc-EEEEcCCCCC----HHHHHHHHH----c-----------------------CCCeEEECCCCCCHHHHHHHHHH
Confidence 76655 2222334432 333333332 1 355666666543321 2457
Q ss_pred HHHHHHHcCCeeee
Q 028240 197 IVPLCRFVRLAVKS 210 (211)
Q Consensus 197 ~~~~~~~~gi~v~a 210 (211)
++++|++.|+.|.|
T Consensus 120 vv~~ah~~gvsVEa 133 (286)
T 1gvf_A 120 VVDFCHSQDCSVEA 133 (286)
T ss_dssp HHHHHHHTTCEEEE
T ss_pred HHHHHHHcCCEEEE
Confidence 88888888888765
No 265
>2a4a_A Deoxyribose-phosphate aldolase; lyase, TIM beta/alpha barrel, DEOC, DERA, structur genomics, structural genomics consortium, SGC; 1.84A {Plasmodium yoelii yoelii} SCOP: c.1.10.1
Probab=24.88 E-value=2.6e+02 Score=22.14 Aligned_cols=78 Identities=15% Similarity=0.041 Sum_probs=46.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCC-cH---HHHHHHHHhcC----C--CCcEEEEeccccccCCCcccccCCChH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPY-TN---EILLGKALKEL----P--RENIQVATKFGFVELGFTSVIVKGTPE 109 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g-~~---E~~lG~~l~~~----~--r~~~~i~tK~~~~~~~~~~~~~~~s~~ 109 (211)
+++....+.+.|.++|..|+=|+-.|+.| -+ -+++-+.++.+ + ..+ +--|..... + +.+
T Consensus 170 d~e~i~~A~~ia~eaGADfVKTSTGf~~~gAT~edv~lm~~~v~~~~~~~~~tg~~--vgVKaaGGI--------r-t~e 238 (281)
T 2a4a_A 170 TEDLIIKTTLAVLNGNADFIKTSTGKVQINATPSSVEYIIKAIKEYIKNNPEKNNK--IGLKVSGGI--------S-DLN 238 (281)
T ss_dssp SHHHHHHHHHHHHTTTCSEEECCCSCSSCCCCHHHHHHHHHHHHHHHHHCGGGTTC--CEEEEESSC--------C-SHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHhhcccccCCCC--ceEEEeCCC--------C-CHH
Confidence 44547799999999999999999888743 22 23455555321 0 111 233332111 1 678
Q ss_pred HHHHHHHHHHhhcCCCcee
Q 028240 110 YVRSCCEASLRRLDVEYID 128 (211)
Q Consensus 110 ~i~~~~~~sL~~Lg~~~iD 128 (211)
...+-++..-..||-++++
T Consensus 239 ~al~~i~aga~~lG~~w~~ 257 (281)
T 2a4a_A 239 TASHYILLARRFLSSLACH 257 (281)
T ss_dssp HHHHHHHHHHHHTC-----
T ss_pred HHHHHHHHhhhhccccccc
Confidence 8888888888888876543
No 266
>3nhm_A Response regulator; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 2.19A {Myxococcus xanthus}
Probab=24.81 E-value=87 Score=20.29 Aligned_cols=60 Identities=15% Similarity=0.008 Sum_probs=34.9
Q ss_pred CceeEEEeecCCCCCCHHHHHHHHHHHHHc---CcccEEEeCCCCHHHHHHHhccCCceEEeccCC
Q 028240 125 EYIDLYYQHRVDTSVPIEETIGEMKKLVEE---GKIKYIGLSEASPDTIRRAHAVHPITAVQLEWS 187 (211)
Q Consensus 125 ~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~---G~ir~iGvs~~~~~~l~~~~~~~~~~~~q~~~~ 187 (211)
..+|++++...-+.. ..++.++++++. ..+.-|-+|........++...+..+++.-+++
T Consensus 46 ~~~dlvi~d~~l~~~---~g~~~~~~l~~~~~~~~~pii~~s~~~~~~~~~~~~~g~~~~l~KP~~ 108 (133)
T 3nhm_A 46 HPPDVLISDVNMDGM---DGYALCGHFRSEPTLKHIPVIFVSGYAPRTEGPADQPVPDAYLVKPVK 108 (133)
T ss_dssp SCCSEEEECSSCSSS---CHHHHHHHHHHSTTTTTCCEEEEESCCC-----TTSCCCSEEEESSCC
T ss_pred CCCCEEEEeCCCCCC---CHHHHHHHHHhCCccCCCCEEEEeCCCcHhHHHHhhcCCceEEeccCC
Confidence 357999997654433 356666667765 357778888765444456666555556655554
No 267
>2z61_A Probable aspartate aminotransferase 2; amino acid aminotransferase, kynurenine aminotransferase, MJ0684, cytoplasm; HET: LLP; 2.20A {Methanococcus jannaschii}
Probab=24.65 E-value=2.5e+02 Score=21.98 Aligned_cols=133 Identities=9% Similarity=-0.066 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHcCCCeEeCCCCcCC--C--cHHHHHHHHHhc-----CCCCcEEEEeccccccCCCcccccCCChHHH
Q 028240 41 EEDGISIIKHAFSKGITFFDTADKYGP--Y--TNEILLGKALKE-----LPRENIQVATKFGFVELGFTSVIVKGTPEYV 111 (211)
Q Consensus 41 ~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g--~~E~~lG~~l~~-----~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i 111 (211)
+....+.+..+++.+.. .|+. | .-++.+.+++.. ...+++++++= ..+.+
T Consensus 44 ~~~v~~a~~~~~~~~~~------~y~~~~~~~~l~~~la~~~~~~~g~~~~~~~v~~~~g---------------~~~a~ 102 (370)
T 2z61_A 44 PKPIVDEGIKSLKEGKT------HYTDSRGILELREKISELYKDKYKADIIPDNIIITGG---------------SSLGL 102 (370)
T ss_dssp CHHHHHHHHHHHHTTCC------SCCCTTCCHHHHHHHHHHHHHHSSCCCCGGGEEEESS---------------HHHHH
T ss_pred CHHHHHHHHHHHHcCcc------CCCCCCCCHHHHHHHHHHHHHHhCCCCChhhEEECCC---------------hHHHH
Confidence 35677778888877643 3442 2 245567777753 23345554421 12223
Q ss_pred HHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHHHHHhcc-CCceEEeccCCccc
Q 028240 112 RSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTIRRAHAV-HPITAVQLEWSLWA 190 (211)
Q Consensus 112 ~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~~-~~~~~~q~~~~~~~ 190 (211)
...+.. + ++. =|-+++..|... .....+ +..| ++-+.+. .+.+.+++.+.. .+..++..+.|+.-
T Consensus 103 ~~~~~~-~--~~~--gd~vl~~~p~~~----~~~~~~---~~~g-~~~~~v~-~d~~~l~~~l~~~~~~v~~~~p~nptG 168 (370)
T 2z61_A 103 FFALSS-I--IDD--GDEVLIQNPCYP----CYKNFI---RFLG-AKPVFCD-FTVESLEEALSDKTKAIIINSPSNPLG 168 (370)
T ss_dssp HHHHHH-H--CCT--TCEEEEESSCCT----HHHHHH---HHTT-CEEEEEC-SSHHHHHHHCCSSEEEEEEESSCTTTC
T ss_pred HHHHHH-h--cCC--CCEEEEeCCCch----hHHHHH---HHcC-CEEEEeC-CCHHHHHHhcccCceEEEEcCCCCCcC
Confidence 333322 2 121 166777776542 222222 2233 2334444 678888887753 22223333333311
Q ss_pred cC-chhhHHHHHHHcCCeee
Q 028240 191 RD-IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 191 ~~-~~~~~~~~~~~~gi~v~ 209 (211)
.. ..+ +.+.|+++|+-++
T Consensus 169 ~~~~~~-l~~~~~~~~~~li 187 (370)
T 2z61_A 169 EVIDRE-IYEFAYENIPYII 187 (370)
T ss_dssp CCCCHH-HHHHHHHHCSEEE
T ss_pred cccCHH-HHHHHHHcCCEEE
Confidence 11 223 9999999998776
No 268
>3oa3_A Aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, pathogenic fungus; 1.60A {Coccidioides immitis}
Probab=24.61 E-value=1e+02 Score=24.67 Aligned_cols=28 Identities=11% Similarity=0.145 Sum_probs=24.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP 67 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~ 67 (211)
++++...+.+.|.++|..|+=|+..|+.
T Consensus 186 t~eei~~A~~ia~eaGADfVKTSTGf~~ 213 (288)
T 3oa3_A 186 TADEIIAGCVLSSLAGADYVKTSTGFNG 213 (288)
T ss_dssp CHHHHHHHHHHHHHTTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHcCCCEEEcCCCCCC
Confidence 5677788999999999999999987764
No 269
>3qxb_A Putative xylose isomerase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology; 1.90A {Rhodospirillum rubrum}
Probab=24.28 E-value=77 Score=24.88 Aligned_cols=39 Identities=15% Similarity=0.004 Sum_probs=24.6
Q ss_pred HHhccCCceEEeccCCccccC--------chhhHHHHHHHcCCeeee
Q 028240 172 RAHAVHPITAVQLEWSLWARD--------IENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 172 ~~~~~~~~~~~q~~~~~~~~~--------~~~~~~~~~~~~gi~v~a 210 (211)
+......++.+|+........ .-+++.+.++++|+.+.+
T Consensus 42 ~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~~~~l~~~Gl~i~~ 88 (316)
T 3qxb_A 42 LVRDDLGLEYVQYTYDLTDPWWPDIERDRRAIAYAKAFRKAGLTIES 88 (316)
T ss_dssp HHHHTSCCCEEEEETTTSCTTSCHHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCCEEEeeccccCccccccchhhHHHHHHHHHHHcCCeEEE
Confidence 333446678888765543322 224577888899988765
No 270
>3u80_A 3-dehydroquinate dehydratase, type II; structural genomics, center for structural genomics of infec diseases, csgid, unknown function; 1.60A {Bifidobacterium longum} SCOP: c.23.13.0
Probab=24.11 E-value=1.9e+02 Score=20.71 Aligned_cols=78 Identities=9% Similarity=0.034 Sum_probs=51.3
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH--cCcccEEEeCCCCHHHHHHH---hccCCceE
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE--EGKIKYIGLSEASPDTIRRA---HAVHPITA 181 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~--~G~ir~iGvs~~~~~~l~~~---~~~~~~~~ 181 (211)
+.+.+.+.+++.-..+|+ .++++|-. .-.+.++++.+..+ +|.|--=|--+++.-.+.++ +....+-+
T Consensus 30 Tl~di~~~l~~~a~~~g~-~v~~~QSN------~EgeLId~Ih~a~~~~dgiiINpgA~THtSvAlrDAl~~l~~~~~P~ 102 (151)
T 3u80_A 30 DLDTLRKLCAEWGKDLGL-EVEVRQTD------DEAEMVRWMHQAADEKTPVVMNPAAFTHYSYALADAAHMVIDENLPL 102 (151)
T ss_dssp HHHHHHHHHHHHHHHTTE-EEEEEECS------CHHHHHHHHHHHHHHTCCEEEECTTCCSCCHHHHHHHHHHHHTTCCE
T ss_pred CHHHHHHHHHHHHHHcCC-EEEEEecC------CHHHHHHHHHHhhhcCcEEEECcchhhhhhHHHHHHHHHHhhcCCCE
Confidence 578888889988899996 36766621 12356777766654 45666667777766677776 44455667
Q ss_pred EeccCCcccc
Q 028240 182 VQLEWSLWAR 191 (211)
Q Consensus 182 ~q~~~~~~~~ 191 (211)
+.++.+-.+.
T Consensus 103 VEVHiSNi~a 112 (151)
T 3u80_A 103 MEVHISNPSA 112 (151)
T ss_dssp EEEESSCCC-
T ss_pred EEEEcCCccc
Confidence 8887776554
No 271
>1n7k_A Deoxyribose-phosphate aldolase; A.pernix, tetramer, alpha-beta TIM barrel, riken S genomics/proteomics initiative, RSGI, structural genomics,; 2.00A {Aeropyrum pernix} SCOP: c.1.10.1
Probab=24.06 E-value=2e+02 Score=22.08 Aligned_cols=33 Identities=6% Similarity=-0.044 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcC--CCcHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYG--PYTNEI 72 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg--~g~~E~ 72 (211)
++++...+.+.|.++|..|+=|+..|+ .|-+.+
T Consensus 146 ~~e~i~~a~ria~eaGADfVKTsTG~~~~~gAt~~ 180 (234)
T 1n7k_A 146 DDKTLSLLVDSSRRAGADIVKTSTGVYTKGGDPVT 180 (234)
T ss_dssp CHHHHHHHHHHHHHTTCSEEESCCSSSCCCCSHHH
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCCCCCCCCHH
Confidence 457888999999999999999998776 454433
No 272
>3ghf_A Septum site-determining protein MINC; structural genomics, cell division, cell cycle, septation, PSI-2, protein structure initiative; HET: CIT; 2.20A {Salmonella typhimurium LT2}
Probab=23.83 E-value=1.7e+02 Score=19.75 Aligned_cols=31 Identities=13% Similarity=0.071 Sum_probs=18.5
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc
Q 028240 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE 154 (211)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~ 154 (211)
|+-..+.+..+|-++ .+++.+.+.|.+..++
T Consensus 10 lKG~~~~l~vl~l~~--~d~~~l~~~L~~ki~~ 40 (120)
T 3ghf_A 10 LKGSSFTLSVVHLHE--AEPEVIRQALEDKIAQ 40 (120)
T ss_dssp CCCCCCCCEEEEEES--CCHHHHHHHHHHHHHH
T ss_pred EEcCeeeEEEEEeCC--CCHHHHHHHHHHHHHh
Confidence 433456666666654 4466777777666544
No 273
>4e38_A Keto-hydroxyglutarate-aldolase/keto-deoxy-phospho aldolase; lyase; 1.64A {Vibrionales bacterium swat-3}
Probab=23.61 E-value=2e+02 Score=22.02 Aligned_cols=57 Identities=11% Similarity=0.192 Sum_probs=35.4
Q ss_pred HHHHHHHHHHc-CcccEEEeCC-CCHHHHHHHhccC-CceEEeccCCccccCchhhHHHHHHHcCCeee
Q 028240 144 TIGEMKKLVEE-GKIKYIGLSE-ASPDTIRRAHAVH-PITAVQLEWSLWARDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 144 ~~~~l~~l~~~-G~ir~iGvs~-~~~~~l~~~~~~~-~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~ 209 (211)
..+.+++++++ +. -.+|..+ .+.++++.+++.+ .|.+ . +....+++++|+++|+.++
T Consensus 72 a~e~I~~l~~~~~~-~~iGaGTVlt~~~a~~Ai~AGA~fIv--s------P~~~~~vi~~~~~~gi~~i 131 (232)
T 4e38_A 72 AVEAIRLLRQAQPE-MLIGAGTILNGEQALAAKEAGATFVV--S------PGFNPNTVRACQEIGIDIV 131 (232)
T ss_dssp HHHHHHHHHHHCTT-CEEEEECCCSHHHHHHHHHHTCSEEE--C------SSCCHHHHHHHHHHTCEEE
T ss_pred HHHHHHHHHHhCCC-CEEeECCcCCHHHHHHHHHcCCCEEE--e------CCCCHHHHHHHHHcCCCEE
Confidence 34555555553 21 3555544 5788999888764 3332 1 1234579999999999876
No 274
>2zvr_A Uncharacterized protein TM_0416; hyperthermophIle, ketohexose 3-epimeras tagatose 3-epimerase, isomerase; 2.20A {Thermotoga maritima}
Probab=23.53 E-value=57 Score=25.19 Aligned_cols=12 Identities=17% Similarity=0.249 Sum_probs=5.2
Q ss_pred HHHHHHHcCCee
Q 028240 197 IVPLCRFVRLAV 208 (211)
Q Consensus 197 ~~~~~~~~gi~v 208 (211)
+.+.++++|+.+
T Consensus 73 ~~~~l~~~gl~~ 84 (290)
T 2zvr_A 73 VKILSEELNLPI 84 (290)
T ss_dssp HHHHHHHHTCCE
T ss_pred HHHHHHHcCCeE
Confidence 444444444443
No 275
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=23.43 E-value=96 Score=24.12 Aligned_cols=157 Identities=15% Similarity=0.018 Sum_probs=76.8
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCc---HHHHHHHHHhc---C-CCCcEEEEeccccccCCCcccccCCChHH
Q 028240 38 PLSEEDGISIIKHAFSKGITFFDTADKYGPYT---NEILLGKALKE---L-PRENIQVATKFGFVELGFTSVIVKGTPEY 110 (211)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~---~E~~lG~~l~~---~-~r~~~~i~tK~~~~~~~~~~~~~~~s~~~ 110 (211)
..+.+++.++++.|.+.|++.+=.++++-.+. ..+.+-+.+.. . .+...-|....|.. .+..++
T Consensus 16 ~~~~~~sl~~~~~a~~~G~~~i~~T~H~~~~~~~~~~~~i~~~~~~l~~~~~~~~~~i~I~~G~E--------v~~~~~- 86 (262)
T 3qy7_A 16 AGDSADSIEMARAAVRQGIRTIIATPHHNNGVYKNEPAAVREAADQLNKRLIKEDIPLHVLPGQE--------IRIYGE- 86 (262)
T ss_dssp CSSHHHHHHHHHHHHHTTCCEEECCCBSEETTEECCHHHHHHHHHHHHHHHHHTTCCCEEECCCE--------EECCTT-
T ss_pred CCCHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCCCEEecCeE--------Eecchh-
Confidence 35788899999999999999999998874321 12222222221 1 01111122222221 112222
Q ss_pred HHHHHHH-HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC------CCHHHHHHHhccCCceEEe
Q 028240 111 VRSCCEA-SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE------ASPDTIRRAHAVHPITAVQ 183 (211)
Q Consensus 111 i~~~~~~-sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~------~~~~~l~~~~~~~~~~~~q 183 (211)
+...+++ .+-.|+ --|.+++..|.. .......+.+..+.+.|.+--||=-. ...+.+.++.+.+. .+|
T Consensus 87 ~~~~l~~~~~~~l~--~~~~vl~e~~~~-~~~~~~~~~l~~i~~~g~v~ILAHPeRy~~~~~~~~~l~~l~~~G~--~iE 161 (262)
T 3qy7_A 87 VEQDLAKRQLLSLN--DTKYILIEFPFD-HVPRYAEQLFYDLQLKGYIPVIAHPERNREIRENPSLLYHLVEKGA--ASQ 161 (262)
T ss_dssp HHHHHHTTCSCCGG--GSSEEEEECCTT-CCCTTHHHHHHHHHHTTCEEEEECGGGCHHHHHCTHHHHHHHHTTC--EEE
T ss_pred HHHHHhcCCCcEEC--CceEEEEeCCCc-cCHHHHHHHHHHHHHCCCcEEEECCCccccccccHHHHHHHHHCCC--EEE
Confidence 2222332 222332 124455554432 22345677777777778776665432 12244555555442 345
Q ss_pred ccCCcccc---CchhhHHHHHHHcCCee
Q 028240 184 LEWSLWAR---DIENEIVPLCRFVRLAV 208 (211)
Q Consensus 184 ~~~~~~~~---~~~~~~~~~~~~~gi~v 208 (211)
+..+.+.. .........|.++|+.+
T Consensus 162 iN~~s~~g~~g~~~~~~~~~~~~~gl~~ 189 (262)
T 3qy7_A 162 ITSGSLAGIFGKQLKAFSLRLVEANLIH 189 (262)
T ss_dssp EEHHHHHTTTCHHHHHHHHHHHHTTCCC
T ss_pred EECCccCcccchHHHHHHHHHHhCCCeE
Confidence 54443321 11234566666677654
No 276
>3ftb_A Histidinol-phosphate aminotransferase; structural genomics, PSI, MCSG, protein structure initiative; 2.00A {Clostridium acetobutylicum} SCOP: c.67.1.0
Probab=23.38 E-value=2.6e+02 Score=21.68 Aligned_cols=85 Identities=9% Similarity=-0.103 Sum_probs=47.1
Q ss_pred HHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC---CCCHHHHHHHhccCCceEEeccCCccc
Q 028240 114 CCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---EASPDTIRRAHAVHPITAVQLEWSLWA 190 (211)
Q Consensus 114 ~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~~~~~~~~q~~~~~~~ 190 (211)
++...++.+ |-+++..|... .....++.. ...+..+-+. +++.+.+++++...+..++..+.|+.-
T Consensus 90 al~~~~~~~-----d~vi~~~~~~~----~~~~~~~~~--g~~~~~~~~~~~~~~~~~~l~~~l~~~~~v~i~~p~nptG 158 (361)
T 3ftb_A 90 IIELSISLF-----EKILIIVPSYA----EYEINAKKH--GVSVVFSYLDENMCIDYEDIISKIDDVDSVIIGNPNNPNG 158 (361)
T ss_dssp HHHHHHTTC-----SEEEEEESCCT----HHHHHHHHT--TCEEEEEECCTTSCCCHHHHHHHTTTCSEEEEETTBTTTT
T ss_pred HHHHHHHHc-----CcEEEecCChH----HHHHHHHHc--CCeEEEeecCcccCCCHHHHHHhccCCCEEEEeCCCCCCC
Confidence 445555555 66777766432 222222221 2345555543 467788888776544444545544321
Q ss_pred c----CchhhHHHHHHHcCCeee
Q 028240 191 R----DIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 191 ~----~~~~~~~~~~~~~gi~v~ 209 (211)
. ..-.++.+.|+++|+-++
T Consensus 159 ~~~~~~~l~~i~~~~~~~~~~li 181 (361)
T 3ftb_A 159 GLINKEKFIHVLKLAEEKKKTII 181 (361)
T ss_dssp BCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCCHHHHHHHHHHhhhcCCEEE
Confidence 1 123468899999999876
No 277
>3apt_A Methylenetetrahydrofolate reductase; TIM barrel, oxidoreductase, flavin; HET: FAD; 1.85A {Thermus thermophilus} PDB: 3apy_A* 1v93_A*
Probab=23.02 E-value=2.9e+02 Score=22.00 Aligned_cols=146 Identities=11% Similarity=0.002 Sum_probs=77.9
Q ss_pred HHHHHHHHHHcCCCeEeCCCCcCCCcHHHHH--HHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh
Q 028240 44 GISIIKHAFSKGITFFDTADKYGPYTNEILL--GKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (211)
Q Consensus 44 ~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~l--G~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (211)
..+.++.....+..+++.++.-|....+..+ ...+++. .+-....+.- .+.+...+...+... ..
T Consensus 31 l~~~~~~L~~~~pd~vsVT~~~~g~~r~~t~~~a~~i~~~---g~~~i~Hltc---------~~~~~~~l~~~L~~~-~~ 97 (310)
T 3apt_A 31 LFRTLEELKAFRPAFVSITYGAMGSTRERSVAWAQRIQSL---GLNPLAHLTV---------AGQSRKEVAEVLHRF-VE 97 (310)
T ss_dssp HHHHHHHHGGGCCSEEEECCCSTTCSHHHHHHHHHHHHHT---TCCBCEEEEC---------TTSCHHHHHHHHHHH-HH
T ss_pred HHHHHHHHhcCCCCEEEEecCCCCCcchhHHHHHHHHHHh---CCCeEEEeec---------CCCCHHHHHHHHHHH-HH
Confidence 3455555556688999998765543334433 3333321 2222222211 123678888777775 48
Q ss_pred cCCCceeEEEeec-CCCC--------CCHHHHHHHHHHHHHc-CcccEEEeCCCC--------HH-HHHHHhc----cCC
Q 028240 122 LDVEYIDLYYQHR-VDTS--------VPIEETIGEMKKLVEE-GKIKYIGLSEAS--------PD-TIRRAHA----VHP 178 (211)
Q Consensus 122 Lg~~~iDl~~lh~-~~~~--------~~~~~~~~~l~~l~~~-G~ir~iGvs~~~--------~~-~l~~~~~----~~~ 178 (211)
+|++. ++.|-. |... ..+..+.+.++.+++. |.=-.||+..+. .+ .++.+.+ -..
T Consensus 98 ~GI~n--iLaLrGD~p~~~g~~~~~~~~f~~a~~Lv~~ir~~~g~~f~igvA~yPE~Hp~~~~~~~d~~~Lk~Kv~aGAd 175 (310)
T 3apt_A 98 SGVEN--LLALRGDPPRGERVFRPHPEGFRYAAELVALIRERYGDRVSVGGAAYPEGHPESESLEADLRHFKAKVEAGLD 175 (310)
T ss_dssp TTCCE--EEEECCCCSTTCCSCCCCTTSCSSHHHHHHHHHHHHGGGSEEEEEECTTCCTTSSCHHHHHHHHHHHHHHHCS
T ss_pred CCCCE--EEEEcCCCCCCCCCCCCCCCCCCCHHHHHHHHHHhCCCCeEEEEEeCCCcCCCCCCHHHHHHHHHHHHHcCCC
Confidence 89874 344432 2111 1133455555555555 632588888752 22 3333322 256
Q ss_pred ceEEeccCCccccCchhhHHHHHHHcCCe
Q 028240 179 ITAVQLEWSLWARDIENEIVPLCRFVRLA 207 (211)
Q Consensus 179 ~~~~q~~~~~~~~~~~~~~~~~~~~~gi~ 207 (211)
+.+-|.-|+.-. -...++.|++.||.
T Consensus 176 f~iTQ~ffD~~~---~~~f~~~~r~~Gi~ 201 (310)
T 3apt_A 176 FAITQLFFNNAH---YFGFLERARRAGIG 201 (310)
T ss_dssp EEEECCCSCHHH---HHHHHHHHHHTTCC
T ss_pred EEEecccCCHHH---HHHHHHHHHHcCCC
Confidence 777777776522 24688899998854
No 278
>3vnd_A TSA, tryptophan synthase alpha chain; psychrophilic enzyme, cold adaptation; HET: PE8; 2.60A {Shewanella frigidimarina}
Probab=22.97 E-value=2.7e+02 Score=21.69 Aligned_cols=66 Identities=9% Similarity=-0.026 Sum_probs=38.4
Q ss_pred HHHHHHHHHHHHc-CcccEEEeCCCCH------HHHHHHhccCCceEEeccCCccccCchhhHHHHHHHcCCeee
Q 028240 142 EETIGEMKKLVEE-GKIKYIGLSEASP------DTIRRAHAVHPITAVQLEWSLWARDIENEIVPLCRFVRLAVK 209 (211)
Q Consensus 142 ~~~~~~l~~l~~~-G~ir~iGvs~~~~------~~l~~~~~~~~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~ 209 (211)
+..++.++++++. -.+--+..+-+++ +.+.+.......+.+-++--+... ..++.+.|+++|+.++
T Consensus 80 ~~~~~~v~~ir~~~~~~Pivlm~Y~npv~~~g~e~f~~~~~~aGvdgvii~Dlp~ee--~~~~~~~~~~~gl~~i 152 (267)
T 3vnd_A 80 SDCFDIITKVRAQHPDMPIGLLLYANLVFANGIDEFYTKAQAAGVDSVLIADVPVEE--SAPFSKAAKAHGIAPI 152 (267)
T ss_dssp HHHHHHHHHHHHHCTTCCEEEEECHHHHHHHCHHHHHHHHHHHTCCEEEETTSCGGG--CHHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHHHhcCCCCCEEEEecCcHHHHhhHHHHHHHHHHcCCCEEEeCCCCHhh--HHHHHHHHHHcCCeEE
Confidence 3568888888887 4566555554454 333333322344444443333322 3469999999998754
No 279
>3o9z_A Lipopolysaccaride biosynthesis protein WBPB; oxidoreductase, sugar biosynthesis, dehydrogenase; HET: NAD AKG; 1.45A {Thermus thermophilus} PDB: 3oa0_A*
Probab=22.71 E-value=2e+02 Score=22.63 Aligned_cols=60 Identities=15% Similarity=0.103 Sum_probs=31.9
Q ss_pred ChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeC---CCCHHHHHHHhc
Q 028240 107 TPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLS---EASPDTIRRAHA 175 (211)
Q Consensus 107 s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs---~~~~~~l~~~~~ 175 (211)
+.+.+.+.++..++ .-+.+|++.+..|.. . -.+...++.+.|| ++=+- ..+.++++++.+
T Consensus 55 ~~~~ll~~~~~l~~--~~~~vD~V~I~tP~~-~----H~~~~~~al~aGk--hVl~EKPla~~~~ea~~l~~ 117 (312)
T 3o9z_A 55 EPEAFEAYLEDLRD--RGEGVDYLSIASPNH-L----HYPQIRMALRLGA--NALSEKPLVLWPEEIARLKE 117 (312)
T ss_dssp CHHHHHHHHHHHHH--TTCCCSEEEECSCGG-G----HHHHHHHHHHTTC--EEEECSSSCSCHHHHHHHHH
T ss_pred CHHHHHHHhhhhcc--cCCCCcEEEECCCch-h----hHHHHHHHHHCCC--eEEEECCCCCCHHHHHHHHH
Confidence 45555544443333 446789999988853 2 2344445556675 33221 245566555544
No 280
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=22.59 E-value=2.5e+02 Score=21.18 Aligned_cols=133 Identities=13% Similarity=0.052 Sum_probs=82.3
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHH
Q 028240 38 PLSEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEA 117 (211)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~ 117 (211)
....++..++++.|.+.|+.-+-.-+.|- +...+.|+ ..++-|++-++.+... .+.+.....+++
T Consensus 15 ~~t~~~i~~l~~~a~~~~~~aVcv~p~~v-----~~~~~~l~---~~~v~v~~vigFP~G~-------~~~~~k~~e~~~ 79 (220)
T 1ub3_A 15 TATLEEVAKAAEEALEYGFYGLCIPPSYV-----AWVRARYP---HAPFRLVTVVGFPLGY-------QEKEVKALEAAL 79 (220)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEECCGGGH-----HHHHHHCT---TCSSEEEEEESTTTCC-------SCHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHhCCCEEEECHHHH-----HHHHHHhC---CCCceEEEEecCCCCC-------CchHHHHHHHHH
Confidence 45789999999999999999888766552 22234443 3357777777654322 144555666777
Q ss_pred HHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcC---cccEE-EeCCCCHHHHHHHhcc---CCceEEeccC
Q 028240 118 SLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEG---KIKYI-GLSEASPDTIRRAHAV---HPITAVQLEW 186 (211)
Q Consensus 118 sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G---~ir~i-Gvs~~~~~~l~~~~~~---~~~~~~q~~~ 186 (211)
.++ +|.|-||+..--..-.....+.+.+.+..+++.- .++-| -.+-.+.+++..+.+. ...+++...+
T Consensus 80 Ai~-~GAdevd~vinig~~~~g~~~~v~~ei~~v~~a~~~~~lkvIlet~~l~~e~i~~a~~ia~eaGADfVKTsT 154 (220)
T 1ub3_A 80 ACA-RGADEVDMVLHLGRAKAGDLDYLEAEVRAVREAVPQAVLKVILETGYFSPEEIARLAEAAIRGGADFLKTST 154 (220)
T ss_dssp HHH-TTCSEEEEECCHHHHHTTCHHHHHHHHHHHHHHSTTSEEEEECCGGGSCHHHHHHHHHHHHHHTCSEEECCC
T ss_pred HHH-cCCCEEEecccchhhhCCCHHHHHHHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhCCCEEEeCC
Confidence 666 7999999976222111234567777777777752 23322 2222456666665443 3567888873
No 281
>3v7e_A Ribosome-associated protein L7AE-like; RNA-protein complex, K-turn, L7AE-like, A member L7AE/L30E superfamily; HET: SAM; 2.80A {Bacillus subtilis}
Probab=22.51 E-value=1.5e+02 Score=18.47 Aligned_cols=15 Identities=20% Similarity=0.297 Sum_probs=9.2
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
..+..+|++++|.++
T Consensus 43 ~~i~~lc~~~~Ip~~ 57 (82)
T 3v7e_A 43 SSVVSLAEDQGISVS 57 (82)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred HHHHHHHHHcCCCEE
Confidence 346666666666654
No 282
>2w6k_A COBE; biosynthetic protein, cobalamin, complete proteome, vitamin B12; 1.70A {Pseudomonas aeruginosa} SCOP: c.151.1.1 PDB: 2bsn_A 2w6l_A
Probab=22.34 E-value=1.3e+02 Score=21.14 Aligned_cols=46 Identities=15% Similarity=0.019 Sum_probs=34.1
Q ss_pred CChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHH
Q 028240 106 GTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKL 151 (211)
Q Consensus 106 ~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l 151 (211)
.+.+.|.+.+++.|...|++.-++--+..++...+-..+.+.-+++
T Consensus 22 ~~~~~i~~ai~~aL~~~~l~~~~v~~latid~K~dE~gL~~~A~~l 67 (145)
T 2w6k_A 22 CSAEHLRALLERTLGEHGRSLAELDALASIDGKRDEPGLRQLATLL 67 (145)
T ss_dssp CCHHHHHHHHHHHHHHTTCCGGGCCEEEEECSSSCCHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHHcCCCHHHcceEechHHhCCCHHHHHHHHHh
Confidence 4789999999999999998877777777777655444455544444
No 283
>3fvs_A Kynurenine--oxoglutarate transaminase 1; alpha beta protein, PLP dependent protein, aminotransferase, pyridoxal phosphate, transferase; HET: LLP; 1.50A {Homo sapiens} SCOP: c.67.1.1 PDB: 3fvu_A* 3fvx_A* 1w7l_A* 1w7m_A* 1w7n_A*
Probab=22.32 E-value=3e+02 Score=21.98 Aligned_cols=140 Identities=12% Similarity=0.076 Sum_probs=70.1
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC--C--cHHHHHHHHHhc-----CCC-CcEEEEeccccccCCCcccccCCChH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP--Y--TNEILLGKALKE-----LPR-ENIQVATKFGFVELGFTSVIVKGTPE 109 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~--g--~~E~~lG~~l~~-----~~r-~~~~i~tK~~~~~~~~~~~~~~~s~~ 109 (211)
.+....+.+..+++.+. ....|+. | ...+.+.+.+.. ... +++++++=. .+
T Consensus 42 ~~~~v~~a~~~~~~~~~----~~~~y~~~~g~~~lr~~la~~~~~~~g~~~~~~~~i~~~~g~---------------~~ 102 (422)
T 3fvs_A 42 PPDFAVEAFQHAVSGDF----MLNQYTKTFGYPPLTKILASFFGELLGQEIDPLRNVLVTVGG---------------YG 102 (422)
T ss_dssp CCHHHHHHHHHHHHSCG----GGGSCCCTTCCHHHHHHHHHHHHHHHTCCCCHHHHEEEESHH---------------HH
T ss_pred CCHHHHHHHHHHHhCCC----ccCCCCCCCCCHHHHHHHHHHHHHhhCCCCCCCCcEEEECCh---------------HH
Confidence 34667788888888764 2234543 2 234456666653 222 345543211 12
Q ss_pred HHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC---------------CCHHHHHHHh
Q 028240 110 YVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE---------------ASPDTIRRAH 174 (211)
Q Consensus 110 ~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~---------------~~~~~l~~~~ 174 (211)
++...+..+ ++.=|-+++..|... .....+ +. ....+..+-+.. .+.+.+++++
T Consensus 103 ----a~~~~~~~~-~~~gd~vl~~~p~~~-~~~~~~---~~--~g~~~~~~~~~~~~~~~G~~~~~~~~~~d~~~l~~~~ 171 (422)
T 3fvs_A 103 ----ALFTAFQAL-VDEGDEVIIIEPFFD-CYEPMT---MM--AGGRPVFVSLKPGPIQNGELGSSSNWQLDPMELAGKF 171 (422)
T ss_dssp ----HHHHHHHHH-CCTTCEEEEEESCCT-THHHHH---HH--TTCEEEEEECBCCCCCSSSCCBGGGSBCCHHHHHTTC
T ss_pred ----HHHHHHHHH-cCCCCEEEEcCCCch-hhHHHH---HH--cCCEEEEEecccccccccccccccCCCCCHHHHHhhc
Confidence 333333333 122255666666532 222222 11 123455665543 4777887776
Q ss_pred cc-CCceEEeccCCccccC----chhhHHHHHHHcCCeee
Q 028240 175 AV-HPITAVQLEWSLWARD----IENEIVPLCRFVRLAVK 209 (211)
Q Consensus 175 ~~-~~~~~~q~~~~~~~~~----~~~~~~~~~~~~gi~v~ 209 (211)
.. .+..++..+.|+.-.. .-+++.+.|+++|+-++
T Consensus 172 ~~~~~~v~~~~p~nptG~~~~~~~l~~i~~~~~~~~~~li 211 (422)
T 3fvs_A 172 TSRTKALVLNTPNNPLGKVFSREELELVASLCQQHDVVCI 211 (422)
T ss_dssp CTTEEEEEEESSCTTTCCCCCHHHHHHHHHHHHHHTCEEE
T ss_pred CCCceEEEECCCCCCCCcCCCHHHHHHHHHHHHHcCcEEE
Confidence 53 2333344444432111 23578999999999876
No 284
>1itu_A Renal dipeptidase; glycoprotein, membrane-bound, zinc protease BET lactamase, cilastatin, complex (hydrolase-inhibitor), hydro; HET: NAG CIL; 2.00A {Homo sapiens} SCOP: c.1.9.7 PDB: 1itq_A*
Probab=22.29 E-value=2.1e+02 Score=23.60 Aligned_cols=110 Identities=12% Similarity=0.137 Sum_probs=66.6
Q ss_pred HHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHHhh
Q 028240 42 EDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASLRR 121 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~ 121 (211)
+...++|+..-+.|+ .+|+|.. +++.+-.+++-. + .-+|+|.......-+ .+.+. ++...+.+.+.=--
T Consensus 178 ~~G~~vV~emnrlGm-ivDlSH~-----s~~~~~dvl~~s-~-~PviaSHSn~ral~~--h~RNl-~De~l~~la~~GGv 246 (369)
T 1itu_A 178 PFGQRVVKELNRLGV-LIDLAHV-----SVATMKATLQLS-R-APVIFSHSSAYSVCA--SRRNV-PDDVLRLVKQTDSL 246 (369)
T ss_dssp HHHHHHHHHHHHHTC-EEECTTB-----CHHHHHHHHHHC-S-SCCEESSCCBTTTSC--CTTSB-CHHHHHHHHHHTCE
T ss_pred HhHHHHHHHHHHcCC-EEEcCCC-----CHHHHHHHHHhc-C-CCEEEeCCChhhcCC--CCCCC-CHHHHHHHHHcCCe
Confidence 556799999999999 8999976 888888888752 2 346777776432211 01122 23333333333222
Q ss_pred cCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCC
Q 028240 122 LDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSE 164 (211)
Q Consensus 122 Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~ 164 (211)
.|+....-|+ .++....++++.+.++.+++..=+.+||+.+
T Consensus 247 igv~~~~~fl--~~~~~~t~~~~~~hi~hi~~~~G~dhVgiGs 287 (369)
T 1itu_A 247 VMVNFYNNYI--SCTNKANLSQVADHLDHIKEVAGARAVGFGG 287 (369)
T ss_dssp EEECCCHHHH--TSSSCCBHHHHHHHHHHHHHHHCGGGEEECC
T ss_pred EEEEechhhc--CCCCCCCHHHHHHHHHHHHHhhCCCeEEECC
Confidence 2332222111 1223345888999999988886689999886
No 285
>4ggi_A UDP-2,3-diacylglucosamine pyrophosphatase LPXI; structural genomics, PSI-biology; HET: UDG; 2.52A {Caulobacter crescentus} PDB: 4ggm_X*
Probab=22.27 E-value=97 Score=24.47 Aligned_cols=43 Identities=19% Similarity=0.068 Sum_probs=29.7
Q ss_pred HHHHHHHhccC-CceEEeccCCccccCchhhHHHHHHHcCCeeeeC
Q 028240 167 PDTIRRAHAVH-PITAVQLEWSLWARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 167 ~~~l~~~~~~~-~~~~~q~~~~~~~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
++.++.+.+.. .--++|.--+++-+ .++++++|.++||.+++|
T Consensus 234 ~dti~~~~~ag~~~ivi~~g~si~~~--~~~~i~~a~~~gi~~~~~ 277 (283)
T 4ggi_A 234 VATIHRAARAGLAGIVGEAGRLLVVD--REAVIAAADDLGLFVLGV 277 (283)
T ss_dssp HHHHHHHHHTTCCEEEEETTBCEETT--HHHHHHHHHHHTCEEEEE
T ss_pred HHHHHHHHHcCCeEEEEcCCCcEEeC--HHHHHHHHHHcCCEEEEe
Confidence 35555555543 22246888887554 457999999999999875
No 286
>2q3l_A Uncharacterized protein; SPOIIAA-like fold, structural genomics, joint center for STR genomics, JCSG, protein structure initiative; HET: MSE; 2.25A {Shewanella loihica pv-4} SCOP: c.13.2.2
Probab=22.19 E-value=1.9e+02 Score=19.53 Aligned_cols=61 Identities=11% Similarity=0.078 Sum_probs=41.5
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHH-HHHHcCcccEEEeCCCCHH
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMK-KLVEEGKIKYIGLSEASPD 168 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~-~l~~~G~ir~iGvs~~~~~ 168 (211)
.+.+...+++.++.-+.+.+++|+.-.--....+...|+.+. .+.....+..+-|-+-+.+
T Consensus 35 ~~~l~~~l~~~l~~~~~~~i~ll~~~~~f~G~~~~a~~~d~k~~~~h~~~~~RiAvV~d~~W 96 (126)
T 2q3l_A 35 YEQMTPLLESALAGIKTPEIVALIDITELDGLSLHAAWDDLKLGLKHGKEFKRVAIIGQGEL 96 (126)
T ss_dssp HHHHHHHHHHHTTTCCSSCEEEEEEEEEEEEECHHHHHHHHHHHHHHGGGEEEEEEECCSHH
T ss_pred HHHHHHHHHHHHHhCCCceEEEEEEecCCCCCCHHHHHHHHHhhhhHHhcCCEEEEEcChHH
Confidence 455777777777766655588887542211234778888877 5677788888888876644
No 287
>1uqr_A 3-dehydroquinate dehydratase; shikimate pathway, aromatic amino acid biosynthesis, lyase; 1.7A {Actinobacillus pleuropneumoniae} SCOP: c.23.13.1
Probab=22.13 E-value=44 Score=24.11 Aligned_cols=80 Identities=15% Similarity=0.078 Sum_probs=52.0
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHc--CcccEEEeCCCCHHHHHHHhccCCceEE
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEE--GKIKYIGLSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~--G~ir~iGvs~~~~~~l~~~~~~~~~~~~ 182 (211)
..+.+.|.+.+++.-+.+|+ .++++|-. .-.+.++++.+..+. |.|--=|--+|+.-.+.+++....+-++
T Consensus 25 ~~Tl~di~~~l~~~a~~~g~-~l~~~QSN------~EGeLId~Ih~a~~~~dgiIINpgA~THtSvAlrDAl~~v~~P~V 97 (154)
T 1uqr_A 25 SQTLSDIEQHLQQSAQAQGY-ELDYFQAN------GEESLINRIHQAFQNTDFIIINPGAFTHTSVAIRDALLAVSIPFI 97 (154)
T ss_dssp CCCHHHHHHHHHHHHHHTTC-EEEEEECS------SHHHHHHHHHHTTTTCCEEEEECTTHHHHCHHHHHHHHHHTCCEE
T ss_pred CCCHHHHHHHHHHHHHHCCC-EEEEEeeC------CHHHHHHHHHHhhhcCcEEEECcchhccchHHHHHHHHhCCCCEE
Confidence 34789999999999999997 47777622 123677777776432 2222223334444567777776666678
Q ss_pred eccCCcccc
Q 028240 183 QLEWSLWAR 191 (211)
Q Consensus 183 q~~~~~~~~ 191 (211)
.++.|-.+.
T Consensus 98 EVHiSNi~a 106 (154)
T 1uqr_A 98 EVHLSNVHA 106 (154)
T ss_dssp EEESSCGGG
T ss_pred EEEecCccc
Confidence 888876554
No 288
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=22.08 E-value=3.4e+02 Score=22.48 Aligned_cols=135 Identities=15% Similarity=0.156 Sum_probs=76.0
Q ss_pred HHHHHHHHHHHHcCCCeEeC--C-----------------CCcCCCcHHH---HHHHHHhc----CCCCcEEEEeccccc
Q 028240 42 EDGISIIKHAFSKGITFFDT--A-----------------DKYGPYTNEI---LLGKALKE----LPRENIQVATKFGFV 95 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~~Dt--A-----------------~~Yg~g~~E~---~lG~~l~~----~~r~~~~i~tK~~~~ 95 (211)
++..+..+.|.++|+..+|. | +.||. .-|. ++-+.++. +..+ .|..|+.+.
T Consensus 171 ~~f~~AA~~a~~AGfDgVEIh~ahGYLl~QFLsp~~N~RtD~yGG-slenR~rf~~Eiv~aVr~avg~~--~V~vRls~~ 247 (402)
T 2hsa_B 171 EDYRRSALNAIEAGFDGIEIHGAHGYLIDQFLKDGINDRTDEYGG-SLANRCKFITQVVQAVVSAIGAD--RVGVRVSPA 247 (402)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECCTTSHHHHHHCTTTCCCCSTTSS-SHHHHHHHHHHHHHHHHHHHCGG--GEEEEECSS
T ss_pred HHHHHHHHHHHHcCCCEEEECCccchHHHhccCCccCccCCccCc-ChhhhhHHHHHHHHHHHHHhCCC--cEEEEeccc
Confidence 34455666778999999883 2 33552 2222 23333332 2323 467788654
Q ss_pred cCCCcccccCCChHHHHHHHHHHHhhcC------CCceeEEEeecCCCC----CC-----HH-HHHHHHHHHHHcCcccE
Q 028240 96 ELGFTSVIVKGTPEYVRSCCEASLRRLD------VEYIDLYYQHRVDTS----VP-----IE-ETIGEMKKLVEEGKIKY 159 (211)
Q Consensus 96 ~~~~~~~~~~~s~~~i~~~~~~sL~~Lg------~~~iDl~~lh~~~~~----~~-----~~-~~~~~l~~l~~~G~ir~ 159 (211)
.... +.. ......-...+-+.|+..| +++|++ |..... .+ .. ..++...++++.=.+--
T Consensus 248 ~~~~-g~~-~~~~~~~~~~la~~le~~G~~gg~~vd~i~v---~~~~~~~~~~~~~~~~~~~~~~~~~~~~vk~~~~iPv 322 (402)
T 2hsa_B 248 IDHL-DAM-DSNPLSLGLAVVERLNKIQLHSGSKLAYLHV---TQPRYVAYGQTEAGRLGSEEEEARLMRTLRNAYQGTF 322 (402)
T ss_dssp CCST-TCC-CSCHHHHHHHHHHHHHHHHHHHTSCCSEEEE---ECCCCCTTTTSSSTTTTHHHHHHHHHHHHHHHCSSCE
T ss_pred cccC-CCC-CCCCHHHHHHHHHHHHhcCCccCCceEEEEE---ecCccccccCCccccccCCcchHHHHHHHHHHCCCCE
Confidence 2110 000 1011122234556667777 666665 443211 11 11 24677778888767788
Q ss_pred EEeCCCCHHHHHHHhccCCceEEec
Q 028240 160 IGLSEASPDTIRRAHAVHPITAVQL 184 (211)
Q Consensus 160 iGvs~~~~~~l~~~~~~~~~~~~q~ 184 (211)
|++..++++..+++++....+.+++
T Consensus 323 i~~G~i~~~~a~~~l~~g~aD~V~i 347 (402)
T 2hsa_B 323 ICSGGYTRELGIEAVAQGDADLVSY 347 (402)
T ss_dssp EEESSCCHHHHHHHHHTTSCSEEEE
T ss_pred EEeCCCCHHHHHHHHHCCCCceeee
Confidence 8888899999999998877777765
No 289
>1t57_A Conserved protein MTH1675; structural genomics, FMN; HET: FMN; 2.30A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.49.1.2
Probab=21.95 E-value=1.3e+02 Score=22.71 Aligned_cols=71 Identities=18% Similarity=0.061 Sum_probs=42.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
.++...-++++|-+.||+.+=.|...|. +-..+-+.+ .+++++.|.-.--..+ ....+.+...+-|
T Consensus 36 T~~tl~la~era~e~~Ik~iVVASssG~--TA~k~~e~~----~~~lVvVTh~~GF~~p--------g~~e~~~e~~~~L 101 (206)
T 1t57_A 36 TERVLELVGERADQLGIRNFVVASVSGE--TALRLSEMV----EGNIVSVTHHAGFREK--------GQLELEDEARDAL 101 (206)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSH--HHHHHHTTC----CSEEEEECCCTTSSST--------TCCSSCHHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCH--HHHHHHHHc----cCCEEEEeCcCCCCCC--------CCCcCCHHHHHHH
Confidence 4556677788888999999999988884 222222222 2277777765321111 2233445666777
Q ss_pred hhcCC
Q 028240 120 RRLDV 124 (211)
Q Consensus 120 ~~Lg~ 124 (211)
++.|.
T Consensus 102 ~~~G~ 106 (206)
T 1t57_A 102 LERGV 106 (206)
T ss_dssp HHHTC
T ss_pred HhCCC
Confidence 77775
No 290
>1ub3_A Aldolase protein; schiff base, deoxyribose phosphate, carbinolamine, structural genomics, riken structural genomics/proteomics initiative; HET: HPD; 1.40A {Thermus thermophilus} SCOP: c.1.10.1 PDB: 1j2w_A*
Probab=21.92 E-value=1.7e+02 Score=22.12 Aligned_cols=28 Identities=29% Similarity=0.526 Sum_probs=24.9
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCC
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGP 67 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~ 67 (211)
++++...+.+.|.++|..|+=|+..|+.
T Consensus 131 ~~e~i~~a~~ia~eaGADfVKTsTGf~~ 158 (220)
T 1ub3_A 131 SPEEIARLAEAAIRGGADFLKTSTGFGP 158 (220)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSS
T ss_pred CHHHHHHHHHHHHHhCCCEEEeCCCCCC
Confidence 5688899999999999999999988873
No 291
>1vp8_A Hypothetical protein AF0103; putative pyruvate kinase, structural genomics, joint center structural genomics, JCSG; HET: MSE FMN; 1.30A {Archaeoglobus fulgidus} SCOP: c.49.1.2
Probab=21.86 E-value=1.1e+02 Score=23.07 Aligned_cols=71 Identities=23% Similarity=0.232 Sum_probs=44.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEecc-ccccCCCcccccCCChHHHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQVATKF-GFVELGFTSVIVKGTPEYVRSCCEAS 118 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~-~~~~~~~~~~~~~~s~~~i~~~~~~s 118 (211)
.++...-++++|-+.||+.+=.|...|. +-..+-+.++ .-++++.|.- +.... ....+.+...+.
T Consensus 28 T~~tl~la~era~e~~Ik~iVVAS~sG~--TA~k~~e~~~---~i~lVvVTh~~GF~~p---------g~~e~~~e~~~~ 93 (201)
T 1vp8_A 28 TEETLRLAVERAKELGIKHLVVASSYGD--TAMKALEMAE---GLEVVVVTYHTGFVRE---------GENTMPPEVEEE 93 (201)
T ss_dssp HHHHHHHHHHHHHHHTCCEEEEECSSSH--HHHHHHHHCT---TCEEEEEECCTTSSST---------TCCSSCHHHHHH
T ss_pred HHHHHHHHHHHHHHcCCCEEEEEeCCCh--HHHHHHHHhc---CCeEEEEeCcCCCCCC---------CCCcCCHHHHHH
Confidence 4556677788888999999999988874 3333333442 2366766654 33211 223344567778
Q ss_pred HhhcCC
Q 028240 119 LRRLDV 124 (211)
Q Consensus 119 L~~Lg~ 124 (211)
|++.|.
T Consensus 94 L~~~G~ 99 (201)
T 1vp8_A 94 LRKRGA 99 (201)
T ss_dssp HHHTTC
T ss_pred HHhCCC
Confidence 888885
No 292
>3kht_A Response regulator; PSI-II, 11023K, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.10A {Hahella chejuensis} SCOP: c.23.1.0
Probab=21.83 E-value=1.8e+02 Score=19.09 Aligned_cols=65 Identities=14% Similarity=0.074 Sum_probs=42.6
Q ss_pred HhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHH---cCcccEEEeCCC-CHHHHHHHhccCCceEEeccC
Q 028240 119 LRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVE---EGKIKYIGLSEA-SPDTIRRAHAVHPITAVQLEW 186 (211)
Q Consensus 119 L~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~---~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~ 186 (211)
++.+....+|++++...-+.. ..++.++.+++ ...+.-|-++.. +.+...++++.+..+++.-++
T Consensus 44 ~~~l~~~~~dlii~D~~l~~~---~g~~~~~~lr~~~~~~~~pii~~s~~~~~~~~~~~~~~ga~~~l~Kp~ 112 (144)
T 3kht_A 44 LYQVQQAKYDLIILDIGLPIA---NGFEVMSAVRKPGANQHTPIVILTDNVSDDRAKQCMAAGASSVVDKSS 112 (144)
T ss_dssp HHHHTTCCCSEEEECTTCGGG---CHHHHHHHHHSSSTTTTCCEEEEETTCCHHHHHHHHHTTCSEEEECCT
T ss_pred HHHhhcCCCCEEEEeCCCCCC---CHHHHHHHHHhcccccCCCEEEEeCCCCHHHHHHHHHcCCCEEEECCC
Confidence 334444568999987643322 35666777776 346778888875 566677777777667776666
No 293
>2gax_A Hypothetical protein ATU0240; MCSG, structural genomics, agrobacterium tumfaciens, hypothe protein, PSI; 1.80A {Agrobacterium tumefaciens str} SCOP: c.131.1.1
Probab=21.78 E-value=1.6e+02 Score=20.44 Aligned_cols=49 Identities=10% Similarity=0.072 Sum_probs=34.6
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEE
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYTNEILLGKALKELPRENIQV 88 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i 88 (211)
+.++..++.+.|.+.|+.+.|..+.=-...++......+.+.+.+++.+
T Consensus 64 ~~~~L~~l~~~a~~~~l~~~~f~d~~~~~~~~~~~~~~~~~~~~~~l~~ 112 (135)
T 2gax_A 64 DQEALRKIHQRSLERDITTSLYIEEMFATGHDAANRQVFSHFSPDTAKV 112 (135)
T ss_dssp CHHHHHHHHHHHHHTTCCCEEEEGGGGGCCCHHHHHHHHTTCCTTTCCE
T ss_pred CHHHHHHHHHHHHHCCCcEEeccHHhhhCCCHHHHHHHHhcCCcccceE
Confidence 5588999999999999998775543222236667777777777665543
No 294
>2b0l_A GTP-sensing transcriptional pleiotropic repressor; CODY, DNA-binding, nucleotide-binding, transcript regulation, winged HTH motif.; 2.90A {Bacillus subtilis} SCOP: a.4.5.66
Probab=21.73 E-value=1.6e+02 Score=19.09 Aligned_cols=36 Identities=11% Similarity=0.131 Sum_probs=26.4
Q ss_pred CHHHHHHHHHHHHHcCcccEEE-------eCCCCHHHHHHHhc
Q 028240 140 PIEETIGEMKKLVEEGKIKYIG-------LSEASPDTIRRAHA 175 (211)
Q Consensus 140 ~~~~~~~~l~~l~~~G~ir~iG-------vs~~~~~~l~~~~~ 175 (211)
...-+.++|..|.++|+|...- |...+.+.+.++.+
T Consensus 56 Sr~tVr~al~~L~~~GlI~~~~gG~~G~~V~~~~~~~~~~~~~ 98 (102)
T 2b0l_A 56 TRSVIVNALRKLESAGVIESRSLGMKGTYIKVLNNKFLIELEN 98 (102)
T ss_dssp CHHHHHHHHHHHHHTTSEEEEECSSSCEEEEECCHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHCCCEEEEeCCCCcEEEecCCHHHHHHHHH
Confidence 3456889999999999998653 44467777776654
No 295
>2oqx_A Tryptophanase; lyase, pyridoxal phosphate, tryptophan catabolism; HET: CME EPE; 1.90A {Escherichia coli} SCOP: c.67.1.2 PDB: 2c44_A 2v1p_A* 2v0y_A*
Probab=21.53 E-value=1e+02 Score=25.45 Aligned_cols=45 Identities=7% Similarity=0.026 Sum_probs=28.2
Q ss_pred CHHHHHHHhc-----cCCceEEeccCCcc-----ccCchhhHHHHHHHcCCeeee
Q 028240 166 SPDTIRRAHA-----VHPITAVQLEWSLW-----ARDIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 166 ~~~~l~~~~~-----~~~~~~~q~~~~~~-----~~~~~~~~~~~~~~~gi~v~a 210 (211)
+.+.+++++. ..+..++....|.. ....-+++.+.|+++|+-++.
T Consensus 168 d~~~Le~~i~~~~~~~~~~vi~~~~~n~~gG~~~~~~~l~~i~~la~~~gi~li~ 222 (467)
T 2oqx_A 168 DLEGLERGIEEVGPNNVPYIVATITSNSAGGQPVSLANLKAMYSIAKKYDIPVVM 222 (467)
T ss_dssp CHHHHHHHHHHHCGGGCCCEEEESSBCGGGCBCCCHHHHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHhcCCCceeEEEEeccccCCCCccCCHHHHHHHHHHHHHcCCEEEE
Confidence 6788888875 23444443333331 222235799999999998874
No 296
>3ec1_A YQEH GTPase; atnos1, atnoa1, trap, PVHL, hydrolase, signaling protein; HET: GDP; 2.36A {Geobacillus stearothermophilus}
Probab=21.40 E-value=3.3e+02 Score=22.06 Aligned_cols=119 Identities=12% Similarity=0.128 Sum_probs=74.2
Q ss_pred CHHHHHHHHHHHHHcC---CCeEeCCCCcCCCcHHHHHHHHHhcCCCCcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 40 SEEDGISIIKHAFSKG---ITFFDTADKYGPYTNEILLGKALKELPRENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~G---i~~~DtA~~Yg~g~~E~~lG~~l~~~~r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
+.+...++++...+.- +-.+|.++..+. -...+-+.+. ...-++|.+|...... ....+.+.+.+.
T Consensus 57 ~~e~f~~~L~~~~~~~~lil~VvD~~d~~~s--~~~~l~~~l~--~~piilV~NK~DLl~~-------~~~~~~~~~~l~ 125 (369)
T 3ec1_A 57 DDDDFLSMLHRIGESKALVVNIVDIFDFNGS--FIPGLPRFAA--DNPILLVGNKADLLPR-------SVKYPKLLRWMR 125 (369)
T ss_dssp --CHHHHHHHHHHHHCCEEEEEEETTCSGGG--CCSSHHHHCT--TSCEEEEEECGGGSCT-------TCCHHHHHHHHH
T ss_pred CHHHHHHHHHHhhccCcEEEEEEECCCCCCc--hhhHHHHHhC--CCCEEEEEEChhcCCC-------ccCHHHHHHHHH
Confidence 4455667777665432 335887765432 1112233333 3456788999975321 123567777777
Q ss_pred HHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCCCHHHH
Q 028240 117 ASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEASPDTI 170 (211)
Q Consensus 117 ~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~~~~~l 170 (211)
+.++.+|....+++.+-.- .....++.++.+.++.+...|--+|-+|..-..+
T Consensus 126 ~~~~~~g~~~~~v~~iSA~-~g~gi~~L~~~I~~~~~~~~i~~vG~~nvGKStl 178 (369)
T 3ec1_A 126 RMAEELGLCPVDVCLVSAA-KGIGMAKVMEAINRYREGGDVYVVGCTNVGKSTF 178 (369)
T ss_dssp HHHHTTTCCCSEEEECBTT-TTBTHHHHHHHHHHHHTTSCEEEECCTTSSHHHH
T ss_pred HHHHHcCCCcccEEEEECC-CCCCHHHHHHHHHhhcccCcEEEEcCCCCchHHH
Confidence 7788888654466655433 3456788999999888888899999999865443
No 297
>4eiv_A Deoxyribose-phosphate aldolase; chemotherapy, brain cysts, bradyzoite, structural genomics, for structural genomics of infectious diseases; 1.37A {Toxoplasma gondii} PDB: 3qyq_A*
Probab=21.39 E-value=2e+02 Score=23.08 Aligned_cols=40 Identities=20% Similarity=0.214 Sum_probs=29.4
Q ss_pred CHHHHHHHHHHHHHcCCCeEeCCCCcCCCc----HHHHHHHHHh
Q 028240 40 SEEDGISIIKHAFSKGITFFDTADKYGPYT----NEILLGKALK 79 (211)
Q Consensus 40 ~~~~~~~~l~~A~~~Gi~~~DtA~~Yg~g~----~E~~lG~~l~ 79 (211)
+++...++.+.|+++|..|+=|+-.++.+. .-+++-++++
T Consensus 164 ~~e~i~~A~~ia~~AGADFVKTSTGf~~~gAT~edV~lM~~~v~ 207 (297)
T 4eiv_A 164 GGDIISRAAVAALEGGADFLQTSSGLGATHATMFTVHLISIALR 207 (297)
T ss_dssp CHHHHHHHHHHHHHHTCSEEECCCSSSSCCCCHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHhCCCEEEcCCCCCCCCCCHHHHHHHHHHHH
Confidence 345467899999999999999999887532 2335656664
No 298
>2r6o_A Putative diguanylate cyclase/phosphodiesterase (G domains); ggdef and EAL domains, structural genomics, PSI-2; 1.80A {Thiobacillus denitrificans} PDB: 3ii8_A* 3n3t_A*
Probab=21.25 E-value=3e+02 Score=21.49 Aligned_cols=98 Identities=17% Similarity=0.199 Sum_probs=59.4
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCCC--CCCHHHHHHHHHHHHHcCcccEE---EeCCCCHHHHHHHhccCCceEE
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVDT--SVPIEETIGEMKKLVEEGKIKYI---GLSEASPDTIRRAHAVHPITAV 182 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~--~~~~~~~~~~l~~l~~~G~ir~i---Gvs~~~~~~l~~~~~~~~~~~~ 182 (211)
...+...+.+.+++.++.. +.+.+.-.+. ..+.+.+.+.+..|++.|.--+| |....+...+.. .+++.+
T Consensus 128 ~~~~~~~l~~~l~~~~~~~-~~l~lEItE~~~~~~~~~~~~~l~~Lr~~G~~ialDDFGtG~ssl~~L~~----l~~d~i 202 (294)
T 2r6o_A 128 GEHLTRAVDRALARSGLRP-DCLELEITENVMLVMTDEVRTCLDALRARGVRLALDDFGTGYSSLSYLSQ----LPFHGL 202 (294)
T ss_dssp GGHHHHHHHHHHHHHCCCG-GGEEEEEEGGGGGGCCHHHHHHHHHHHHHTCEEEEEEETSSCBCHHHHHH----SCCCEE
T ss_pred CcHHHHHHHHHHHHcCCCc-CEEEEEEeCCchhhChHHHHHHHHHHHHCCCEEEEECCCCCchhHHHHHh----CCCCEE
Confidence 3556777888888888653 2233332221 12346788999999999984433 333334444433 356666
Q ss_pred eccCCcccc--------CchhhHHHHHHHcCCeeee
Q 028240 183 QLEWSLWAR--------DIENEIVPLCRFVRLAVKS 210 (211)
Q Consensus 183 q~~~~~~~~--------~~~~~~~~~~~~~gi~v~a 210 (211)
-++-++... ..-+.++..|+..|+.|+|
T Consensus 203 KID~sfv~~i~~~~~~~~iv~~ii~la~~lg~~vvA 238 (294)
T 2r6o_A 203 KIDQSFVRKIPAHPSETQIVTTILALARGLGMEVVA 238 (294)
T ss_dssp EECHHHHTTTTTSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred EECHHHHhhhhcChHHHHHHHHHHHHHHHCCCEEEE
Confidence 665444322 1124588999999999987
No 299
>3l8h_A Putative haloacid dehalogenase-like hydrolase; HAD superfamily, GMHB, D-glycero-D-manno-heptose-1, 7-bispho phosphatase; HET: FX1; 1.68A {Bordetella bronchiseptica}
Probab=21.21 E-value=1.3e+02 Score=20.86 Aligned_cols=16 Identities=6% Similarity=0.250 Sum_probs=10.6
Q ss_pred HHHHHHHHHHHHHcCc
Q 028240 141 IEETIGEMKKLVEEGK 156 (211)
Q Consensus 141 ~~~~~~~l~~l~~~G~ 156 (211)
+.++.+.|++|++.|.
T Consensus 29 ~~g~~~~l~~L~~~g~ 44 (179)
T 3l8h_A 29 LPGSLQAIARLTQADW 44 (179)
T ss_dssp CTTHHHHHHHHHHTTC
T ss_pred CcCHHHHHHHHHHCCC
Confidence 3456777777777764
No 300
>3lwz_A 3-dehydroquinate dehydratase; AROQ, IDP90771, amino- acid biosynthesis, aromatic amino acid biosynthesis, lyase, structural genomics; 1.65A {Yersinia pestis}
Probab=21.18 E-value=96 Score=22.30 Aligned_cols=78 Identities=15% Similarity=0.109 Sum_probs=51.6
Q ss_pred CCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEE----EeCCCCHHHHHHHhccCCce
Q 028240 105 KGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYI----GLSEASPDTIRRAHAVHPIT 180 (211)
Q Consensus 105 ~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~i----Gvs~~~~~~l~~~~~~~~~~ 180 (211)
..+.+.|.+.+++.-..+|+ .++++|-. .-.+.++++.+.. +.+..| |--+++.-.+.+++....+-
T Consensus 31 ~~Tl~di~~~l~~~a~~~g~-~~~~~QSN------~EgeLId~Ih~a~--~~~dgiiINpgA~THtSvAlrDAl~~~~~P 101 (153)
T 3lwz_A 31 YTTLAEIVSQLEIQAQGMDV-ALSHLQSN------AEHALIDSIHQAR--GNTDFILINPAAFTHTSVALRDALLGVQIP 101 (153)
T ss_dssp CCCHHHHHHHHHHHHHHTTE-EEEEEECS------CHHHHHHHHHHHT--TTCSEEEEECGGGGGTCHHHHHHHHHHTCC
T ss_pred CCCHHHHHHHHHHHHHHcCC-EEEEEecC------CHHHHHHHHHHhh--hcCceEEEccccceechHHHHHHHHhcCCC
Confidence 34788899999999999996 36766621 1236777777764 334443 44455556677776665666
Q ss_pred EEeccCCcccc
Q 028240 181 AVQLEWSLWAR 191 (211)
Q Consensus 181 ~~q~~~~~~~~ 191 (211)
++.++.+-.+.
T Consensus 102 ~VEVHiSNi~a 112 (153)
T 3lwz_A 102 FIEIHLSNVHA 112 (153)
T ss_dssp EEEEESSCGGG
T ss_pred EEEEEcCCccc
Confidence 78887776544
No 301
>3rys_A Adenosine deaminase 1; SGX, hydrolase; HET: ADE; 2.60A {Arthrobacter aurescens} SCOP: c.1.9.0
Probab=21.18 E-value=3.3e+02 Score=21.99 Aligned_cols=154 Identities=12% Similarity=0.069 Sum_probs=83.5
Q ss_pred HHHHHHHHHHcCCCeEeCCCC----cCCCc-HHHHHHHHHhcCCC--CcEEEEeccccccCCCcccccCCChHHHHHHHH
Q 028240 44 GISIIKHAFSKGITFFDTADK----YGPYT-NEILLGKALKELPR--ENIQVATKFGFVELGFTSVIVKGTPEYVRSCCE 116 (211)
Q Consensus 44 ~~~~l~~A~~~Gi~~~DtA~~----Yg~g~-~E~~lG~~l~~~~r--~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~ 116 (211)
+.+.++.+.+.|+.+++.=.. -+.|. .|.++-..++...+ +++-|..|+-... ....+++...+.++
T Consensus 83 ~~~~l~~~~~dgV~y~Eir~~P~~~~~~gl~~~~~v~~v~~~~~~a~~~~gi~~~lI~~~------~R~~~~~~a~~~l~ 156 (343)
T 3rys_A 83 TRAYLERAAAGGVRHAEIMMDPQAHTSRGVALETCVNGVANALATSEEDFGVSTLLIAAF------LRDMSEDSALEVLD 156 (343)
T ss_dssp HHHHHHHHHHTTEEEEEEEECHHHHHTTTCCHHHHHHHHHHHHTTHHHHHSCEEEEEEEE------ETTSCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCEEEEEEecHHHhccCCCCHHHHHHHHHHHHHHHhhcCceeEEEEEEe------CCCCCHHHHHHHHH
Confidence 577788888999999875210 02222 33344333332211 1121233321110 01235677777777
Q ss_pred HHHhhc-CCCceeEEEeecCCCCCCHHHHHHHHHHHHHcCcccEEEeCCC-CHHHHHHHhccCCceEEeccCCccccCch
Q 028240 117 ASLRRL-DVEYIDLYYQHRVDTSVPIEETIGEMKKLVEEGKIKYIGLSEA-SPDTIRRAHAVHPITAVQLEWSLWARDIE 194 (211)
Q Consensus 117 ~sL~~L-g~~~iDl~~lh~~~~~~~~~~~~~~l~~l~~~G~ir~iGvs~~-~~~~l~~~~~~~~~~~~q~~~~~~~~~~~ 194 (211)
..++-- ++--+|+ ...+...+.+...+.++..++.|+-..+=.... ++..+.+++......-+-.-+++.+ .
T Consensus 157 ~a~~~~~~vvG~dL---~g~E~~~~~~~~~~~~~~A~~~gl~~~~HagE~~~~~~i~~al~~lg~~rIgHgv~l~~---d 230 (343)
T 3rys_A 157 QLLAMHAPIAGIGL---DSAEVGNPPSKFERLYQRAAEAGLRRIAHAGEEGPASYITEALDVLHVERIDHGIRCME---D 230 (343)
T ss_dssp HHHHTTCCCCEEEE---ESCCTTCCGGGGHHHHHHHHHTTCEEEEEESSSSCHHHHHHHHHTSCCSEEEECGGGGG---C
T ss_pred HHHhCCCCEEEEec---CCcccCCCHHHHHHHHHHHHHCCCeEEEeeCCCCCHHHHHHHHhcCCcceeeeeeeecC---C
Confidence 776631 2334454 344444556667777888888887766655543 4566777766333333332222221 2
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
.++++.++++||.+.
T Consensus 231 ~~l~~~l~~~~i~le 245 (343)
T 3rys_A 231 TDVVQRLVAEQVPLT 245 (343)
T ss_dssp HHHHHHHHHHTCCEE
T ss_pred hHHHHHHHhcCCCee
Confidence 468899999999875
No 302
>2gwg_A 4-oxalomesaconate hydratase; TIM-barrel like protein, structural genomics, PSI, protein S initiative; 1.80A {Rhodopseudomonas palustris} SCOP: c.1.9.15
Probab=21.14 E-value=3.1e+02 Score=21.67 Aligned_cols=66 Identities=6% Similarity=-0.084 Sum_probs=36.4
Q ss_pred HHHHHHHHHHc--CcccEEEeCCC--------CHHHHHHHhccCCceEEeccCCc---------cccCchhhHHHHHHHc
Q 028240 144 TIGEMKKLVEE--GKIKYIGLSEA--------SPDTIRRAHAVHPITAVQLEWSL---------WARDIENEIVPLCRFV 204 (211)
Q Consensus 144 ~~~~l~~l~~~--G~ir~iGvs~~--------~~~~l~~~~~~~~~~~~q~~~~~---------~~~~~~~~~~~~~~~~ 204 (211)
..+.+.++.++ ++...+|+-.. ..++|+++.+...+..+.+..+. ++...-..+++.|.++
T Consensus 92 ~N~~~~~~~~~~p~rf~~~~~~p~~~~~~~~~a~~eL~r~~~~~g~~Gv~l~~~~~~~~~~~~~l~d~~~~p~~~~a~e~ 171 (350)
T 2gwg_A 92 CNELCYRVSQLFPDNFIGAAMLPQSPGVDPKTCIPELEKCVKEYGFVAINLNPDPSGGHWTSPPLTDRIWYPIYEKMVEL 171 (350)
T ss_dssp HHHHHHHHHHHSTTTEEEEEECCCCTTSCGGGGHHHHHHHHHTSCCCEEEECSCTTSSCCCSCCTTSGGGHHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCcEEEEEeCCCCCCCCHHHHHHHHHHHHhccCCeEEEECCCCCCccCCCCCCCCHHHHHHHHHHHHc
Confidence 44556666665 34445554332 23566666644444444543221 1111224799999999
Q ss_pred CCeee
Q 028240 205 RLAVK 209 (211)
Q Consensus 205 gi~v~ 209 (211)
|+.|+
T Consensus 172 ~lpv~ 176 (350)
T 2gwg_A 172 EIPAM 176 (350)
T ss_dssp TCCEE
T ss_pred CCeEE
Confidence 99885
No 303
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=21.07 E-value=1.2e+02 Score=22.91 Aligned_cols=15 Identities=7% Similarity=0.107 Sum_probs=8.8
Q ss_pred hhHHHHHHHcCCeee
Q 028240 195 NEIVPLCRFVRLAVK 209 (211)
Q Consensus 195 ~~~~~~~~~~gi~v~ 209 (211)
+..+++|++.|...+
T Consensus 92 ~~~i~~A~~lGa~~v 106 (257)
T 3lmz_A 92 DRAFDYAKRVGVKLI 106 (257)
T ss_dssp HHHHHHHHHHTCSEE
T ss_pred HHHHHHHHHhCCCEE
Confidence 346666666666544
No 304
>2cw6_A Hydroxymethylglutaryl-COA lyase, mitochondrial; HMG-COA lyase, ketogenic enzyme; HET: 3HG; 2.10A {Homo sapiens} PDB: 3mp3_A* 3mp4_A 3mp5_A*
Probab=20.93 E-value=3e+02 Score=21.50 Aligned_cols=26 Identities=19% Similarity=0.271 Sum_probs=22.6
Q ss_pred CCCHHHHHHHHHHHHHcCCCeEeCCC
Q 028240 38 PLSEEDGISIIKHAFSKGITFFDTAD 63 (211)
Q Consensus 38 ~~~~~~~~~~l~~A~~~Gi~~~DtA~ 63 (211)
..+.++..++++...+.|+..++...
T Consensus 23 ~~~~e~k~~i~~~L~~~Gv~~IE~g~ 48 (298)
T 2cw6_A 23 IVSTPVKIKLIDMLSEAGLSVIETTS 48 (298)
T ss_dssp CCCHHHHHHHHHHHHHTTCSEECCEE
T ss_pred CCCHHHHHHHHHHHHHcCcCEEEECC
Confidence 35779999999999999999999873
No 305
>3sfw_A Dihydropyrimidinase; hydrolase, zinc binding; HET: KCX; 1.73A {Brevibacillus agri} PDB: 1yny_A 1k1d_A*
Probab=20.61 E-value=3.6e+02 Score=22.24 Aligned_cols=109 Identities=10% Similarity=0.008 Sum_probs=54.8
Q ss_pred HHHHHHHHHHHHcCCCe-EeCCCCcCCCcHHHHHHHHHhcCC-CCcEEEEeccccccCCCcccccCCChHHHHHHHHHHH
Q 028240 42 EDGISIIKHAFSKGITF-FDTADKYGPYTNEILLGKALKELP-RENIQVATKFGFVELGFTSVIVKGTPEYVRSCCEASL 119 (211)
Q Consensus 42 ~~~~~~l~~A~~~Gi~~-~DtA~~Yg~g~~E~~lG~~l~~~~-r~~~~i~tK~~~~~~~~~~~~~~~s~~~i~~~~~~sL 119 (211)
+......+.++..|++. +|++.........+.+........ +.-+-+....... + ......+.+++.+
T Consensus 72 e~~~~~~~~~~~~GvTt~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~---------~-~~~~~~~~~~~l~ 141 (461)
T 3sfw_A 72 DNFFTGTKAAAFGGTTSIVDFCLTSKGESLHSAIATWHEKARGKAVIDYGFHLMVS---------D-ANDHVLEELESVV 141 (461)
T ss_dssp CCHHHHHHHHHHTTEEEEEEEECCCTTSCHHHHHHHHHHHHTTTCSSEEEEEEECS---------C-CCHHHHHHHHHHH
T ss_pred hHHHHHHHHHHhCCEEEEEccCCCCCcchHHHHHHHHHHHhhcCcEEEEEEEEEEe---------C-CCHHHHHHHHHHH
Confidence 44556678889999985 565543332224444444333211 1111111111111 1 1233344555555
Q ss_pred hhcCCCceeEEEeecCC-CCCCHHHHHHHHHHHHHcCcccEEE
Q 028240 120 RRLDVEYIDLYYQHRVD-TSVPIEETIGEMKKLVEEGKIKYIG 161 (211)
Q Consensus 120 ~~Lg~~~iDl~~lh~~~-~~~~~~~~~~~l~~l~~~G~ir~iG 161 (211)
++-|...+-+++-. +. ...+.++..+.++...+.|+.-.+=
T Consensus 142 ~~~G~~~ik~~~~~-~~~~~~~~~~l~~~~~~a~~~g~~v~~H 183 (461)
T 3sfw_A 142 NNEGITSLKVFMAY-KNVLMADDETLFKTLIRAKELGALVQVH 183 (461)
T ss_dssp HTSCCCEEEEESSS-TTTTBCCHHHHHHHHHHHHHHTCEEEEE
T ss_pred HhCCCCEEEEEEec-CCCcccCHHHHHHHHHHHHhcCCEEEEE
Confidence 54666666554422 22 2345667888888888888754443
No 306
>2olj_A Amino acid ABC transporter; ABC domain, ATPase, hydrolase; HET: ADP; 2.05A {Geobacillus stearothermophilus} PDB: 2olk_A* 2ouk_A 2q0h_A* 3c4j_A* 3c41_J*
Probab=20.39 E-value=3e+02 Score=21.18 Aligned_cols=47 Identities=17% Similarity=0.162 Sum_probs=35.3
Q ss_pred ceeEEEeecCCCCCCHH---HHHHHHHHHHHcCcccEEEeCCCCHHHHHHHh
Q 028240 126 YIDLYYQHRVDTSVPIE---ETIGEMKKLVEEGKIKYIGLSEASPDTIRRAH 174 (211)
Q Consensus 126 ~iDl~~lh~~~~~~~~~---~~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~ 174 (211)
..+++++..|....+.. .+++.+.++.++|+ .|=+++|+.+.+.++.
T Consensus 177 ~p~lllLDEPts~LD~~~~~~~~~~l~~l~~~g~--tvi~vtHd~~~~~~~~ 226 (263)
T 2olj_A 177 EPKIMLFDEPTSALDPEMVGEVLSVMKQLANEGM--TMVVVTHEMGFAREVG 226 (263)
T ss_dssp CCSEEEEESTTTTSCHHHHHHHHHHHHHHHHTTC--EEEEECSCHHHHHHHC
T ss_pred CCCEEEEeCCcccCCHHHHHHHHHHHHHHHhCCC--EEEEEcCCHHHHHHhC
Confidence 45788888887776654 67888888887764 6778899988877653
No 307
>1vlj_A NADH-dependent butanol dehydrogenase; TM0820, structural G JCSG, protein structure initiative, PSI, joint center for S genomics; HET: NAP; 1.78A {Thermotoga maritima} SCOP: e.22.1.2
Probab=20.32 E-value=3.1e+02 Score=22.55 Aligned_cols=95 Identities=14% Similarity=0.085 Sum_probs=56.9
Q ss_pred cCCCcHHHHHHHHHhcCCCCcEEEEe-ccccccCCCcccccCCChHHHHHHHHHHHhhcCCCceeEEEeecCCCCCCHHH
Q 028240 65 YGPYTNEILLGKALKELPRENIQVAT-KFGFVELGFTSVIVKGTPEYVRSCCEASLRRLDVEYIDLYYQHRVDTSVPIEE 143 (211)
Q Consensus 65 Yg~g~~E~~lG~~l~~~~r~~~~i~t-K~~~~~~~~~~~~~~~s~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~~~~~~~~ 143 (211)
+|.| +-..+++.+++...++++|.| +-... ...+.+.+.++|++-|+++ ..+....++.+.+.
T Consensus 26 ~G~g-~l~~l~~~l~~~g~~r~liVtd~~~~~------------~~g~~~~v~~~L~~~g~~~---~~f~~v~~~p~~~~ 89 (407)
T 1vlj_A 26 FGRG-TIPKIGEEIKNAGIRKVLFLYGGGSIK------------KNGVYDQVVDSLKKHGIEW---VEVSGVKPNPVLSK 89 (407)
T ss_dssp ESTT-CGGGHHHHHHHTTCCEEEEEECSSHHH------------HSSHHHHHHHHHHHTTCEE---EEECCCCSSCBHHH
T ss_pred ECcC-HHHHHHHHHHHcCCCeEEEEECchHHh------------hccHHHHHHHHHHHcCCeE---EEecCccCCCCHHH
Confidence 4554 334577777765434566555 22211 1125667778887777654 34444444556777
Q ss_pred HHHHHHHHHHcCcccEEEeCCCCHHHHHHHhc
Q 028240 144 TIGEMKKLVEEGKIKYIGLSEASPDTIRRAHA 175 (211)
Q Consensus 144 ~~~~l~~l~~~G~ir~iGvs~~~~~~l~~~~~ 175 (211)
+-+.++.+++.|-=-=|||..-++-.+.+++.
T Consensus 90 v~~~~~~~~~~~~D~IIavGGGsviD~AK~iA 121 (407)
T 1vlj_A 90 VHEAVEVAKKEKVEAVLGVGGGSVVDSAKAVA 121 (407)
T ss_dssp HHHHHHHHHHTTCSEEEEEESHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCEEEEeCChhHHHHHHHHH
Confidence 88888888888765667777766666655543
No 308
>3rmj_A 2-isopropylmalate synthase; LEUA, truncation, neisseria MENI TIM barrel, catalytic domain, dimer, leucine biosynthesis, ketoisovalerate; 1.95A {Neisseria meningitidis}
Probab=20.09 E-value=2.3e+02 Score=23.32 Aligned_cols=56 Identities=16% Similarity=0.146 Sum_probs=30.7
Q ss_pred CCCCHHHHHHHHHHHHHcCCCeE---eCCCCcCCCcHHHHHHHHHhcCCC-CcEEEEecc
Q 028240 37 SPLSEEDGISIIKHAFSKGITFF---DTADKYGPYTNEILLGKALKELPR-ENIQVATKF 92 (211)
Q Consensus 37 ~~~~~~~~~~~l~~A~~~Gi~~~---DtA~~Yg~g~~E~~lG~~l~~~~r-~~~~i~tK~ 92 (211)
...+++...++++.+.+.|...| ||...--+....+++....+..+. +++.|....
T Consensus 152 ~r~~~~~~~~~~~~~~~~Ga~~i~l~DT~G~~~P~~~~~lv~~l~~~~~~~~~~~l~~H~ 211 (370)
T 3rmj_A 152 LRSEIDFLAEICGAVIEAGATTINIPDTVGYSIPYKTEEFFRELIAKTPNGGKVVWSAHC 211 (370)
T ss_dssp GGSCHHHHHHHHHHHHHHTCCEEEEECSSSCCCHHHHHHHHHHHHHHSTTGGGSEEEEEC
T ss_pred CccCHHHHHHHHHHHHHcCCCEEEecCccCCcCHHHHHHHHHHHHHhCCCcCceEEEEEe
Confidence 34677888888888888888766 444333232233444443333432 234454443
No 309
>3en0_A Cyanophycinase; serine protease, beta peptide specific, hydrolase, protease; 1.50A {Synechocystis SP}
Probab=20.06 E-value=1.2e+02 Score=24.06 Aligned_cols=57 Identities=14% Similarity=0.257 Sum_probs=38.3
Q ss_pred hHHHHHHHHHHHhhcCCCceeEEEeecCC---CC--------CC-----------H------HHHHHHHHHHHHcCcccE
Q 028240 108 PEYVRSCCEASLRRLDVEYIDLYYQHRVD---TS--------VP-----------I------EETIGEMKKLVEEGKIKY 159 (211)
Q Consensus 108 ~~~i~~~~~~sL~~Lg~~~iDl~~lh~~~---~~--------~~-----------~------~~~~~~l~~l~~~G~ir~ 159 (211)
++...+...+.+++||...++.+-+.... .. .+ + ..+.+.|.+.+++|++-+
T Consensus 69 ~~~~~~~~~~~f~~lG~~~v~~L~i~~r~~a~~~~~~~~l~~ad~I~v~GGnt~~l~~~l~~t~l~~~L~~~~~~G~~~~ 148 (291)
T 3en0_A 69 PLLIGERYQTIFSDMGVKELKVLDIRDRAQGDDSGYRLFVEQCTGIFMTGGDQLRLCGLLADTPLMDRIRQRVHNGEISL 148 (291)
T ss_dssp HHHHHHHHHHHHHHHCCSEEEECCCCSGGGGGCHHHHHHHHHCSEEEECCSCHHHHHHHHTTCHHHHHHHHHHHTTSSEE
T ss_pred hHHHHHHHHHHHHHcCCCeeEEEEecCccccCCHHHHHHHhcCCEEEECCCCHHHHHHHHHhCCHHHHHHHHHHCCCeEE
Confidence 45566677888999998767766553221 10 00 1 145788999999998789
Q ss_pred EEeCC
Q 028240 160 IGLSE 164 (211)
Q Consensus 160 iGvs~ 164 (211)
+|.|-
T Consensus 149 ~GtSA 153 (291)
T 3en0_A 149 AGTSA 153 (291)
T ss_dssp EEETH
T ss_pred EEeCH
Confidence 99983
No 310
>1vi6_A 30S ribosomal protein S2P; structural genomics, ribosome; 1.95A {Archaeoglobus fulgidus} SCOP: c.23.15.1 PDB: 1vi5_A
Probab=20.06 E-value=92 Score=23.59 Aligned_cols=22 Identities=18% Similarity=0.244 Sum_probs=17.5
Q ss_pred ccCchhhHHHHHHHcCCeeeeC
Q 028240 190 ARDIENEIVPLCRFVRLAVKSV 211 (211)
Q Consensus 190 ~~~~~~~~~~~~~~~gi~v~a~ 211 (211)
++..+...+..|.+.||.++|+
T Consensus 123 Dp~~e~~ai~EA~~l~IPvIal 144 (208)
T 1vi6_A 123 DPAIDKQAVSEATAVGIPVVAL 144 (208)
T ss_dssp CTTTTHHHHHHHHHTTCCEEEE
T ss_pred CCCcchhHHHHHHHhCCCEEEE
Confidence 4444556899999999999985
No 311
>4h62_V Mediator of RNA polymerase II transcription subun; mediator complex, nucleus; HET: MES; 3.00A {Saccharomyces cerevisiae}
Probab=20.03 E-value=52 Score=16.18 Aligned_cols=17 Identities=12% Similarity=0.118 Sum_probs=8.5
Q ss_pred EEeCCCCHHHHHHHhcc
Q 028240 160 IGLSEASPDTIRRAHAV 176 (211)
Q Consensus 160 iGvs~~~~~~l~~~~~~ 176 (211)
-||..|+..++++++..
T Consensus 4 sgvtrfdekqieelldn 20 (31)
T 4h62_V 4 SGVTRFDEKQIEELLDN 20 (31)
T ss_dssp ------CHHHHHHHHHH
T ss_pred CccccccHHHHHHHHHH
Confidence 37778888888887654
Done!