Query 028244
Match_columns 211
No_of_seqs 144 out of 1147
Neff 8.5
Searched_HMMs 29240
Date Mon Mar 25 13:47:34 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028244.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028244hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2p8e_A PPM1B beta isoform vari 100.0 3.6E-37 1.2E-41 259.4 19.2 169 16-195 101-300 (307)
2 3kdj_B Protein phosphatase 2C 100.0 3.2E-37 1.1E-41 260.7 18.3 185 15-201 95-313 (316)
3 3qn1_B Protein phosphatase 2C 100.0 5.3E-37 1.8E-41 261.6 19.4 183 16-198 109-333 (337)
4 1a6q_A Phosphatase 2C; catalyt 100.0 3.7E-36 1.2E-40 260.2 17.9 171 16-197 94-296 (382)
5 2iq1_A Protein phosphatase 2C 100.0 2.4E-35 8.1E-40 244.5 17.7 164 18-196 70-265 (274)
6 2irm_A Mitogen-activated prote 100.0 7.6E-36 2.6E-40 256.3 14.5 170 14-194 85-357 (358)
7 2i0o_A Ser/Thr phosphatase; be 100.0 3.8E-35 1.3E-39 246.7 17.5 167 17-193 86-304 (304)
8 4da1_A Protein phosphatase 1K, 100.0 3.5E-35 1.2E-39 254.7 15.8 168 17-199 183-382 (389)
9 2i44_A Serine-threonine phosph 100.0 6.6E-34 2.3E-38 240.9 19.9 168 16-194 106-322 (324)
10 2j4o_A Mitogen-activated prote 100.0 2.1E-34 7.2E-39 250.7 13.4 171 15-196 98-369 (401)
11 3d8k_A PP2C, protein phosphata 100.0 1.2E-33 4.3E-38 243.9 16.0 166 19-198 81-329 (377)
12 2isn_A NYSGXRC-8828Z, phosphat 100.0 6.6E-33 2.3E-37 238.4 19.4 181 3-197 62-337 (364)
13 2pnq_A [pyruvate dehydrogenase 100.0 6.6E-34 2.3E-38 251.5 13.0 177 18-194 160-456 (467)
14 2pk0_A Serine/threonine protei 100.0 3.3E-31 1.1E-35 216.2 14.6 158 16-194 72-247 (250)
15 1txo_A Putative bacterial enzy 100.0 4.9E-31 1.7E-35 213.6 13.0 159 18-193 65-236 (237)
16 2j82_A TPPHA, protein serine-t 100.0 1.6E-29 5.4E-34 204.9 14.5 154 17-192 66-240 (240)
17 2jfr_A Ser-Thr phosphatase MSP 100.0 1.1E-28 3.7E-33 199.4 14.6 151 20-192 63-233 (234)
18 3rnr_A Stage II sporulation E 100.0 2.4E-29 8.3E-34 200.9 7.9 144 24-192 47-211 (211)
19 3t91_A Stage II sporulation pr 99.8 6.5E-18 2.2E-22 136.8 15.8 144 23-198 72-225 (242)
20 3pu9_A Protein serine/threonin 99.7 5.5E-17 1.9E-21 131.7 15.2 141 23-196 75-227 (242)
21 3f79_A Probable two-component 99.6 2E-15 6.8E-20 123.1 12.7 136 23-193 108-253 (255)
22 3zt9_A Serine phosphatase; hyd 99.5 9E-14 3.1E-18 109.0 13.6 126 24-191 66-193 (193)
23 3ke6_A Protein RV1364C/MT1410; 99.1 1.8E-08 6.3E-13 87.1 19.1 148 25-195 102-259 (399)
24 3eq2_A Probable two-component 98.2 9.1E-06 3.1E-10 69.5 10.9 134 25-193 249-392 (394)
25 3q4f_C DNA repair protein XRCC 43.6 59 0.002 24.4 5.9 70 106-189 39-117 (186)
26 1b9l_A Protein (epimerase); is 41.9 81 0.0028 21.5 6.8 58 127-193 47-104 (120)
27 3mud_A DNA repair protein XRCC 40.2 77 0.0026 23.6 6.1 70 106-189 13-91 (175)
28 3v9o_A Dihydroneopterin aldola 39.7 1E+02 0.0034 22.0 7.7 57 128-193 66-122 (143)
29 4aey_A D-erythro-7,8-dihydrone 37.8 91 0.0031 22.7 6.2 59 125-192 81-139 (156)
30 2o90_A DHNA, dihydroneopterin 35.2 1.1E+02 0.0037 21.0 6.3 56 127-191 43-98 (122)
31 3o1k_A Dihydroneopterin aldola 32.8 1.2E+02 0.0039 21.2 5.9 56 127-191 58-113 (132)
32 1z9w_A DHNA, dihydroneopterin 31.8 1.2E+02 0.0042 21.1 5.9 56 127-194 44-99 (133)
33 3r2e_A Dihydroneopterin aldola 31.3 1.3E+02 0.0044 21.4 6.0 57 127-195 67-123 (143)
34 3c4z_A Rhodopsin kinase; Ser/T 30.4 22 0.00074 31.4 2.0 55 125-192 76-134 (543)
35 1dhn_A DHNA, 7,8-dihydroneopte 29.2 1.4E+02 0.0047 20.4 6.1 58 127-195 44-101 (121)
36 1nbu_A DHNA, probable dihydron 25.9 1.6E+02 0.0054 20.0 7.5 58 127-196 44-101 (119)
37 1sql_A Dihydroneopterin aldola 24.9 1.9E+02 0.0065 20.6 7.2 58 127-193 63-121 (146)
38 1hq0_A CNF1, cytotoxic necroti 23.2 66 0.0023 26.0 3.4 25 41-66 142-166 (295)
No 1
>2p8e_A PPM1B beta isoform variant 6; structural genomics, hydrolase, PSI-2, protein structure initiative; 1.82A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=259.37 Aligned_cols=169 Identities=35% Similarity=0.464 Sum_probs=147.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHH
Q 028244 16 HRRWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVA 92 (211)
Q Consensus 16 ~~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ 92 (211)
.+.+.++|.++|.++|+.|.... .....+|||++++++.++++|++||||||+|++|++++.+||.||++.++.|+.
T Consensus 101 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~lT~DH~~~~~~E~~ 180 (307)
T 2p8e_A 101 VENVKNGIRTGFLKIDEYMRNFSDLRNGMDRSGSTAVGVMISPKHIYFINCGDSRAVLYRNGQVCFSTQDHKPCNPREKE 180 (307)
T ss_dssp HHHHHHHHHHHHHHHHHHHHTSTTTC---CCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCCCeEEEEEEECCcEEEEEccCcEEEEEECCccccCCCCCCCCCHHHHH
Confidence 45688999999999999999864 234679999999999999999999999999999999999999999999999999
Q ss_pred HHHh-------------------hCCCCCC---------CccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHH
Q 028244 93 RITN-------------------GGDHDLK---------PWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLA 144 (211)
Q Consensus 93 ri~~-------------------lG~~~~~---------~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii 144 (211)
||.. ||+..+| +.+++.|++..+.+.++|+||||||||||++++++++.+++
T Consensus 181 rI~~~gg~v~~~rv~g~l~ltRalGd~~~k~~~~~~~~~~~v~~~pdv~~~~l~~~d~~llL~SDGl~d~ls~~ei~~~v 260 (307)
T 2p8e_A 181 RIQNAGGSVMIQRVNGSLAVSRALGDYDYKCVDGKGPTEQLVSPEPEVYEILRAEEDEFIILACDGIWDVMSNEELCEYV 260 (307)
T ss_dssp HHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHH
T ss_pred HHHHcCCEEEeCcccCeEeccccccCHHHhcCcccCCCCCeEeccCeEEEEEcCCCCeEEEEECCCcccCCCHHHHHHHH
Confidence 9764 6776655 34688999999988888889999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCC
Q 028244 145 RYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAP 195 (211)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~ 195 (211)
...+.. ..+++.+|+.|++.|+.+|+.||+|||||++...
T Consensus 261 ~~~~~~-----------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~ 300 (307)
T 2p8e_A 261 KSRLEV-----------SDDLENVCNWVVDTCLHKGSRDNMSIVLVCFSNE 300 (307)
T ss_dssp HHHHTT-----------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEEC---
T ss_pred HHHHhc-----------CCCHHHHHHHHHHHHHHcCCCCCeEEEEEECCCC
Confidence 876543 3579999999999999999999999999999764
No 2
>3kdj_B Protein phosphatase 2C 56; ABA, PYL1, abscisic acid signaling pathway, cell membr hydrolase, magnesium, manganese, metal-binding, nucleus; HET: A8S; 1.88A {Arabidopsis thaliana} PDB: 3nmn_B* 3jrq_A* 3ujk_A 3nmv_B 3ujl_B*
Probab=100.00 E-value=3.2e-37 Score=260.69 Aligned_cols=185 Identities=47% Similarity=0.729 Sum_probs=152.1
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHHH
Q 028244 15 WHRRWEAALCRSYERADDVFKDNSLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARI 94 (211)
Q Consensus 15 ~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri 94 (211)
..+.+.++|.++|.++|+.+... ....+|||++++++.++++|++|+||||+|++|++++++||.||++.++.|+.|+
T Consensus 95 ~~~~~~~~l~~a~~~~~~~~~~~--~~~~~GtT~~~~~i~~~~l~vanvGDSR~yl~r~g~~~~lT~DH~~~~~~e~~ri 172 (316)
T 3kdj_B 95 WLEKWKKALFNSFLRVDSEIESV--APETVGSTSVVAVVFPSHIFVANCGDSRAVLCRGKTALPLSVDHKPDREDEAARI 172 (316)
T ss_dssp HHHHHHHHHHHHHHHHHHHGGGT--SCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCCCCCTTSHHHHHHH
T ss_pred hHHHHHHHHHHHHHHHHHHHhcc--cCCCCCCcEEEEEEECCEEEEEEccCCEEEEEECCEecccCCCCCCCCHHHHHHH
Confidence 35678999999999999999775 3457999999999999999999999999999999999999999999999999998
Q ss_pred Hh----------------------hCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhc-
Q 028244 95 TN----------------------GGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRR- 151 (211)
Q Consensus 95 ~~----------------------lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~- 151 (211)
.. +|+..+++.+++.|++..+.+...++||||||||||++++++++.+++...+...
T Consensus 173 ~~~~g~v~~~~~~r~~g~l~~sRalGd~~~~~~~~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~ei~~~~~~~~~~~~ 252 (316)
T 3kdj_B 173 EAAGGKVIQWNGARVFGVLAMSRSIGDRYLKPSIIPDPEVTAVKRVKEDDCLILASDGVWDVMTDEEACEMARKRILLWH 252 (316)
T ss_dssp HHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTSSCHHHHHHHHHHHHHHHT
T ss_pred HHcCCeEEecCCceEcceeccccccCccccCCCcCCCCceEEEEecCCCCEEEEEccCcccCCCHHHHHHHHHHHhhhhc
Confidence 54 7888888899999999999878889999999999999999999999998743210
Q ss_pred cCCCCC-----------CCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCCccCcc
Q 028244 152 RRLPEK-----------GDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPRIRSLQ 201 (211)
Q Consensus 152 ~~~~~~-----------~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~~~~~~ 201 (211)
..+... ......+++.+|+.|++.|+.+|+.||+|||||++...++...+
T Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~Lv~~A~~~g~~DNiTvivv~l~~~~~~~~~ 313 (316)
T 3kdj_B 253 KKNAVAGGASLLADERRKEGKDPAAMSAAEYLSKLAIQRGSKDNISVVVVDLKPRRKLKSK 313 (316)
T ss_dssp TC-----------------CCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECSCC------
T ss_pred cccccccccccccccccccccCchHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCCcccCC
Confidence 000000 00002357899999999999999999999999999887554443
No 3
>3qn1_B Protein phosphatase 2C 16; start domain, BET V domain, PYR/PYL/RCAR, PP2C, abscisic ACI receptor, type 2C protein phosphatase; HET: A8S; 1.80A {Arabidopsis thaliana} PDB: 3zvu_B* 3ujg_B 3nmt_B* 4ds8_B* 3rt0_A 3kb3_B*
Probab=100.00 E-value=5.3e-37 Score=261.55 Aligned_cols=183 Identities=48% Similarity=0.742 Sum_probs=153.2
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--------------CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCC
Q 028244 16 HRRWEAALCRSYERADDVFKDNS--------------LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTV 81 (211)
Q Consensus 16 ~~~~~~~l~~a~~~~~~~l~~~~--------------~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~ 81 (211)
...+.++|.++|..+|+.+.... .....+|||++++++.++++|++||||||+|++|++++++||.
T Consensus 109 ~~~~~~~l~~a~~~~d~~l~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~~anvGDSR~~l~r~g~~~~lT~ 188 (337)
T 3qn1_B 109 QVQWDKVFTSCFLTVDGEIEGKIGRAVVGSSDKVLEAVASETVGSTAVVALVCSSHIVVSNCGDSRAVLFRGKEAMPLSV 188 (337)
T ss_dssp CHHHHHHHHHHHHHHHHHHHTSSCBCCTTCSSCBCCCSSCTTCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEESCC
T ss_pred HHHHHHHHHHHHHHhhHHHHhhhhccccccccccccccccCCCCceEEEEEEECCEEEEEeccCcEEEEEeCCEeeeecC
Confidence 56789999999999999998753 2345799999999999999999999999999999999999999
Q ss_pred CCCCCChHHHHHHHh----------------------hCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHH
Q 028244 82 DHKLDREDEVARITN----------------------GGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDD 139 (211)
Q Consensus 82 dH~~~~~~e~~ri~~----------------------lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~ 139 (211)
||++.++.|..||.. ||+..+++.+++.|++....+.+.++||||||||||+++++++
T Consensus 189 DH~~~~~~e~~ri~~~gg~v~~~~~~r~~g~l~~sRalGd~~~~~~v~~~pdv~~~~~~~~~d~llL~SDGl~d~l~~~e 268 (337)
T 3qn1_B 189 DHKPDREDEYARIENAGGKVIQWQGARVFGVLAMSRSIGDRYLKPYVIPEPEVTFMPRSREDECLILASDGLWDVMNNQE 268 (337)
T ss_dssp CCCTTSHHHHHHHHHTTCCEEESSSEEETTTBSCSBCEECGGGTTTSBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHH
T ss_pred CCCCCCHHHHHHHHHcCCeEEecCCceecCccccccccccccccCCCCCcceEEEEEeCCCCCEEEEEecCcccCCCHHH
Confidence 999999999999875 7888888899999999999888889999999999999999999
Q ss_pred HHHHHHHHHHh----ccCCC--CCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCCcc
Q 028244 140 AVKLARYELRR----RRRLP--EKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPRIR 198 (211)
Q Consensus 140 i~~ii~~~~~~----~~~~~--~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~~~ 198 (211)
+.+++...+.. ..... ........+++.+|+.|++.|+.+|+.||+|||||++...++.
T Consensus 269 i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~l~~~~~~ 333 (337)
T 3qn1_B 269 VCEIARRRILMWHKKNGAPPLAERGKGIDPACQAAADYLSMLALQKGSKDNISIIVIDLKAQRKF 333 (337)
T ss_dssp HHHHHHHHHHHHHHHHCCC----CCSSCCHHHHHHHHHHHHHHHHTTCCSCEEEEEEECCSCC--
T ss_pred HHHHHHHHhhhhccccccccccccccccChhHHHHHHHHHHHHHHcCCCCCEEEEEEEecCCccc
Confidence 99999864321 00000 0000002357899999999999999999999999999876443
No 4
>1a6q_A Phosphatase 2C; catalytic mechanism, metalloenzyme, transductuin, hydrolase; 2.00A {Homo sapiens} SCOP: a.159.1.1 d.219.1.1 PDB: 3fxk_A 3fxj_A 3fxl_A* 3fxm_A* 3fxo_A
Probab=100.00 E-value=3.7e-36 Score=260.20 Aligned_cols=171 Identities=33% Similarity=0.461 Sum_probs=151.3
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHH
Q 028244 16 HRRWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVA 92 (211)
Q Consensus 16 ~~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ 92 (211)
...+.++|.++|..+|+.|.... .....+|||++++++.++++|++||||||+|++|+|++.+||.||++.++.|+.
T Consensus 94 ~~~~~~~l~~af~~~n~~i~~~~~~~~~~~~~GtT~~~~li~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E~~ 173 (382)
T 1a6q_A 94 VENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLEKE 173 (382)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccCCCCCcceEEEEEEECCeEEEEEcCCCeEEEEECCceEEeCCCCCCCCHHHHH
Confidence 56788999999999999998753 345679999999999999999999999999999999999999999999999999
Q ss_pred HHHh-------------------hCCCCCC---------CccccCCcEEEEEec-CCCeEEEEEcCCccccCCHHHHHHH
Q 028244 93 RITN-------------------GGDHDLK---------PWVIAEPEVTFMTRS-EDDEFLILASDGLWDVMSSDDAVKL 143 (211)
Q Consensus 93 ri~~-------------------lG~~~~~---------~~v~~~p~i~~~~~~-~~~~~lil~SDGl~d~l~~~~i~~i 143 (211)
||.. ||++.+| +.|++.|++..+.+. ++++||||||||||++++++++.++
T Consensus 174 RI~~~gg~v~~~Rv~g~l~ltRalGd~~~K~~~~~~~~~~~v~~~Pdv~~~~l~~~~dd~llLaSDGlwd~ls~~ei~~~ 253 (382)
T 1a6q_A 174 RIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELCDF 253 (382)
T ss_dssp HHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHHHH
T ss_pred HHHhcCcEEecccccCceeeeeecCcHhhcccccCCCccCeeeeeeeEEEEEccCCCCeEEEEeccCccCCCChHHHHHH
Confidence 9864 6776655 346889999999888 7788999999999999999999999
Q ss_pred HHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCCc
Q 028244 144 ARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPRI 197 (211)
Q Consensus 144 i~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~~ 197 (211)
+...+.. ..++..+|+.|++.|+.+|+.||+|||||+|....+
T Consensus 254 v~~~~~~-----------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 296 (382)
T 1a6q_A 254 VRSRLEV-----------TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNAPK 296 (382)
T ss_dssp HHHHHTT-----------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTSCC
T ss_pred HHHHHhc-----------CCCHHHHHHHHHHHHHhcCCcCCEEEEEEEecCCCC
Confidence 9876543 457999999999999999999999999999987643
No 5
>2iq1_A Protein phosphatase 2C kappa, PPM1K; structural genomics, PSI-2, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.25A {Homo sapiens}
Probab=100.00 E-value=2.4e-35 Score=244.48 Aligned_cols=164 Identities=32% Similarity=0.444 Sum_probs=142.7
Q ss_pred HHHHHHHHHHHHHHHHHhhcC-----CCCCCCCceeEEEEEeC-CeEEEEeccccceEEEeCCccccCCCCCCCCChHHH
Q 028244 18 RWEAALCRSYERADDVFKDNS-----LAPYSVGTTALVAILSP-CQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEV 91 (211)
Q Consensus 18 ~~~~~l~~a~~~~~~~l~~~~-----~~~~~~GtT~~~~~i~~-~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~ 91 (211)
++.++|.++|..+|+.+.... .....+|||++++++.+ +++|++|+||||+|++|++++.+||.||++..+.|+
T Consensus 70 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~~~GtT~~~~~i~~~~~l~~anvGDSR~~l~r~g~~~~lT~DH~~~~~~E~ 149 (274)
T 2iq1_A 70 NLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDEK 149 (274)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHC---CCGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHhhhccccCCCCCCCcEEEEEEECCCEEEEEEecCceEEEEeCCEeeECCCCCCCcCHHHH
Confidence 567889999999999998753 13467999999999985 599999999999999999999999999999999999
Q ss_pred HHHHh------------------------hCCCCCCC-ccccCCcEEEEEecCC-CeEEEEEcCCccccCCHHHHHHHHH
Q 028244 92 ARITN------------------------GGDHDLKP-WVIAEPEVTFMTRSED-DEFLILASDGLWDVMSSDDAVKLAR 145 (211)
Q Consensus 92 ~ri~~------------------------lG~~~~~~-~v~~~p~i~~~~~~~~-~~~lil~SDGl~d~l~~~~i~~ii~ 145 (211)
.||.. ||+..+|+ ++++.|++..+++.++ ++||||||||||++++++++.+++.
T Consensus 150 ~Ri~~~gG~v~~~~~~~~~~~~~~~ltralGd~~~k~~~v~~~pdi~~~~l~~g~d~~lll~SDGl~d~l~~~ei~~~~~ 229 (274)
T 2iq1_A 150 ERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFVN 229 (274)
T ss_dssp HHHHHTTCCEEECTTSCEEETTTBSCSBCEECGGGTTTTCBCCCEEEEEECCTTTEEEEEEECHHHHTTCCHHHHHHHHH
T ss_pred HHHHHcCCEEEcCCCCceeECCeEeeccccCChhhccCCEEeCCEEEEEEeCCCCCcEEEEEccCcccCCCHHHHHHHHH
Confidence 98753 56655554 3778999999988775 5699999999999999999999997
Q ss_pred HHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCC
Q 028244 146 YELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPR 196 (211)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~ 196 (211)
. ..+|+++|+.|++.|+.+|+.||+||||+++....
T Consensus 230 ~---------------~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~~~ 265 (274)
T 2iq1_A 230 Q---------------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWG 265 (274)
T ss_dssp T---------------SSSHHHHHHHHHHHHHHTTCCSCEEEEEEECTTC-
T ss_pred H---------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEccCCC
Confidence 4 45899999999999999999999999999998653
No 6
>2irm_A Mitogen-activated protein kinase kinase kinase 7 interacting protein 1; TAK1-binding protein, TAB1; 3.00A {Anopheles gambiae}
Probab=100.00 E-value=7.6e-36 Score=256.30 Aligned_cols=170 Identities=24% Similarity=0.355 Sum_probs=147.2
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcC--------------------------------------CCCCCCCceeEEEEEeC
Q 028244 14 GWHRRWEAALCRSYERADDVFKDNS--------------------------------------LAPYSVGTTALVAILSP 55 (211)
Q Consensus 14 ~~~~~~~~~l~~a~~~~~~~l~~~~--------------------------------------~~~~~~GtT~~~~~i~~ 55 (211)
.....+.++|.++|..+|+.+.... .....+|||++++++.+
T Consensus 85 ~~~~~~~~~l~~a~~~~d~~i~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTav~~li~~ 164 (358)
T 2irm_A 85 NTDEAVKELIRQSFMSVEKGYFDSINPHVATKTAIQLHLSADGMNQYEISQQFENVLQKLDSLNNALSVGSSAVLALIHR 164 (358)
T ss_dssp CSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHTTC---------------CCCTHHHHHTTTTCEEEEEEEEEES
T ss_pred cchhhHHHHHHHHHHHHHHHHHHHHHhhhhccccccccccccccccccchhhccchhhhcccccCCCCCCCcEEEEEEEC
Confidence 3456789999999999999987521 02346999999999999
Q ss_pred CeEEEEeccccceEEEeC---C--ccccCCCCCCCCChHHHHHHHh------------------hCCCCCC---------
Q 028244 56 CQIIASNCGDSRVVLSRG---K--QAIPLTVDHKLDREDEVARITN------------------GGDHDLK--------- 103 (211)
Q Consensus 56 ~~~~~anvGDSr~~l~~~---~--~~~~lt~dH~~~~~~e~~ri~~------------------lG~~~~~--------- 103 (211)
+++|+|||||||+|++|+ | ++++||.||++.++.|+.||.. ||++.+|
T Consensus 165 ~~l~vAnvGDSRa~l~r~~~~g~~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~r~~g~llTRalGd~~~K~~~~~~~~~ 244 (358)
T 2irm_A 165 SHLYLGNIGNCRALLCKTDEHDTLTVTQLSVDHNLLNAEEAARLFRLGLMAQNFEGVPLYSTRCIGNYLGKAGYKDCNFL 244 (358)
T ss_dssp SEEEEEEESSCEEEEEECCTTCSCEEEECSCCCBTTSHHHHHHHHTTTCCGGGGTTCTTCBSBCEECHHHHTTGGGSSSS
T ss_pred CEEEEEEcccCeEEEEEecCCCceeeEeCCCCCCCCCHHHHHHHHHcCCeEeccCcCCEEcccCCcCHHHhccccccccc
Confidence 999999999999999999 8 9999999999999999999975 6665544
Q ss_pred -----CccccCCcEEE-EEecCCCeEEEEEcCCccccCC----------HHHHHHHHHHHHHhccCCCCCCCCCCCcHHH
Q 028244 104 -----PWVIAEPEVTF-MTRSEDDEFLILASDGLWDVMS----------SDDAVKLARYELRRRRRLPEKGDTPSSPACG 167 (211)
Q Consensus 104 -----~~v~~~p~i~~-~~~~~~~~~lil~SDGl~d~l~----------~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~ 167 (211)
+.+++.|++.. +.+.++++||||||||||++++ ++++.+++...+.. ..+++.
T Consensus 245 ~~~~~~~v~~~Pdi~~~~~l~~~d~fllL~SDGl~d~l~~~~~~~~~~~~~ei~~~v~~~~~~-----------~~~~~~ 313 (358)
T 2irm_A 245 SSATAEPVIFEPEIVGGIQITPACRFLVLMSSGLCRALHEIFPGDASTGNRELVRMISEEFQN-----------QSTLGG 313 (358)
T ss_dssp TTCSSCSSBCCCEEEEEEECCTTEEEEEEECHHHHHHHHHHSCSSSSHHHHHHHHHHHHHTTT-----------CCSHHH
T ss_pred cccCCCCEeccCeEEEEEEeCCCCcEEEEECCCcccCccccccccccccHHHHHHHHHHHHhc-----------CCCHHH
Confidence 26889999994 9888888899999999999999 89999999876543 358999
Q ss_pred HHHHHHHHHHh---------------CC--CCCceEEEEEEccC
Q 028244 168 AAEELVKIAYD---------------AF--STDNISVVIVDLKA 194 (211)
Q Consensus 168 ~a~~L~~~A~~---------------~~--~~DNiTvivv~~~~ 194 (211)
+|+.|++.|++ +| +.||||||||+|..
T Consensus 314 ~a~~Lv~~A~~~~~~~~~~~~~~~~~~Gg~~~DNiTvivv~~~~ 357 (358)
T 2irm_A 314 VAQSVVHRIVQAHHDTYMQLVEEHRSVTFNSRDDVTLLIRNFNY 357 (358)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHSSSCCCCCCEECCEEEEEEESCC
T ss_pred HHHHHHHHHHHhhhhhhccccccccccCCCCCCCeEEEEEeCCC
Confidence 99999999976 47 89999999999864
No 7
>2i0o_A Ser/Thr phosphatase; beta sandwich, structural genomics, PSI, protei structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Anopheles gambiae}
Probab=100.00 E-value=3.8e-35 Score=246.68 Aligned_cols=167 Identities=30% Similarity=0.496 Sum_probs=139.0
Q ss_pred HHHHHHHHHHHHHHHHHHhhc-----------------CCCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccC
Q 028244 17 RRWEAALCRSYERADDVFKDN-----------------SLAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPL 79 (211)
Q Consensus 17 ~~~~~~l~~a~~~~~~~l~~~-----------------~~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~l 79 (211)
.++.++|.++|.++|+.+... ......+|||++++++.++++|++||||||+|++|+|++++|
T Consensus 86 ~~~~~~l~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~GtT~~~~~i~~~~l~vanvGDSRa~l~r~g~~~~L 165 (304)
T 2i0o_A 86 KEFEKALKEAFLGFDATLLQEKVIEELKVLSGDSAGSDAEPGKDSGCTAVVALLHGKDLYVANAGDSRCVVCRNGKALEM 165 (304)
T ss_dssp TCHHHHHHHHHHHHHHHTTSHHHHHHHHHHHCC-----CCTTTSCEEEEEEEEEETTEEEEEEESSCEEEEEETTEEEEC
T ss_pred ccHHHHHHHHHHHHHHHHHhhhhHHHHhhhccccccccccCCCCCCccEEEEEEECCEEEEEEccCcEEEEEECCEEEEc
Confidence 357889999999999988753 112567999999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHh--------------------hCCCCCCC---------ccccCCcEEEEEecCCCeEEEEEcCC
Q 028244 80 TVDHKLDREDEVARITN--------------------GGDHDLKP---------WVIAEPEVTFMTRSEDDEFLILASDG 130 (211)
Q Consensus 80 t~dH~~~~~~e~~ri~~--------------------lG~~~~~~---------~v~~~p~i~~~~~~~~~~~lil~SDG 130 (211)
|.||++.++.|+.||.. ||+..+|. .|++.|++..+++.++|.||||||||
T Consensus 166 T~DH~~~~~~e~~rI~~~gg~v~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~pdi~~~~l~~~D~fllL~SDG 245 (304)
T 2i0o_A 166 SFDHKPEDTVEYQRIEKAGGRVTLDGRVNGGLNLSRAIGDHGYKMNKSLPAEEQMISALPDIEKITVGPEDEFMVLACDG 245 (304)
T ss_dssp CCCCCTTSHHHHHHHHHTTCCBCTTSCBTTSCSCSBCEECGGGCCCTTSCGGGSSSBCCCEEEEEECCTTEEEEEEECHH
T ss_pred CCCcCCcCHHHHHHHHhCCCEEEeCCeEcCceeccccccCHHHccCccCCccCCeEEeeCeEEEEEcCCCCeEEEEECcC
Confidence 99999999999999875 56655442 45789999999888888889999999
Q ss_pred ccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHh------CCCCCceEEEEEEcc
Q 028244 131 LWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYD------AFSTDNISVVIVDLK 193 (211)
Q Consensus 131 l~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~------~~~~DNiTvivv~~~ 193 (211)
||++++++++.+++...+... ..+++.+|+.|++.|+. +++.||+|||||+|+
T Consensus 246 l~d~l~~~ei~~~v~~~~~~~----------~~~~~~~a~~L~~~a~~~~~~g~~g~~DNiTvivv~~~ 304 (304)
T 2i0o_A 246 IWNFMTSEQVVQFVQERINKP----------GMKLSKICEELFDHCLAPHTRGDGTGCDNMTAIIVQFK 304 (304)
T ss_dssp HHTTCCHHHHHHHHHHHHTST----------TCCHHHHHHHHHHHHC------------CEEEEEEEEC
T ss_pred ccccCCHHHHHHHHHHHHhhc----------CCCHHHHHHHHHHHHHHhhhccCCCCCCCeEEEEEEeC
Confidence 999999999999998765431 25799999999999986 458999999999974
No 8
>4da1_A Protein phosphatase 1K, mitochondrial; metal-ION-assisted catalysis, dehydrogenase phosphatase, hydrolase; 2.38A {Homo sapiens} PDB: 3qht_A 1l2n_A
Probab=100.00 E-value=3.5e-35 Score=254.72 Aligned_cols=168 Identities=31% Similarity=0.430 Sum_probs=144.4
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC-----CCCCCCCceeEEEEEeCC-eEEEEeccccceEEEeCCccccCCCCCCCCChHH
Q 028244 17 RRWEAALCRSYERADDVFKDNS-----LAPYSVGTTALVAILSPC-QIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDE 90 (211)
Q Consensus 17 ~~~~~~l~~a~~~~~~~l~~~~-----~~~~~~GtT~~~~~i~~~-~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e 90 (211)
.++.++|..+|..+|+.+.... .....+|||++++++.++ ++|++||||||+|++|++++.+||.||++.++.|
T Consensus 183 ~~~~~~l~~a~~~~n~~i~~~~~~~~~~~~~~~GtT~~~~li~~~~~l~vanvGDSRayl~r~g~~~~LT~DHs~~~~~E 262 (389)
T 4da1_A 183 KNLETLLTLAFLEIDKAFSSHARLSADATLLTSGTTATVALLRDGIELVVASVGDSRAILCRKGKPMKLTIDHTPERKDE 262 (389)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHSSCGGGGGCEECEEEEEEETTTEEEEEEESSCEEEEEETTEEEECCCCCCTTSHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHhhhccccccCCCCCeEEEEEEEcCCeEEEEEeeccEEEEEECCEeEEeCCCCCCCCHHH
Confidence 3567889999999999998754 123568999999999876 9999999999999999999999999999999999
Q ss_pred HHHHHh------------------------hCCCCCCC-ccccCCcEEEEEecCC-CeEEEEEcCCccccCCHHHHHHHH
Q 028244 91 VARITN------------------------GGDHDLKP-WVIAEPEVTFMTRSED-DEFLILASDGLWDVMSSDDAVKLA 144 (211)
Q Consensus 91 ~~ri~~------------------------lG~~~~~~-~v~~~p~i~~~~~~~~-~~~lil~SDGl~d~l~~~~i~~ii 144 (211)
+.|+.. ||+..+++ ++.+.|++..+.+..+ ++||||||||||++++++++.+++
T Consensus 263 ~~Ri~~~gG~v~~~~~~~~~~~g~l~ltRalGd~~~k~~~v~~~pdi~~~~l~~~~dd~llL~SDGL~d~l~~~ei~~il 342 (389)
T 4da1_A 263 KERIKKCGGFVAWNSLGQPHVNGRLAMTRSIGDLDLKTSGVIAEPETKRIKLHHADDSFLVLTTDGINFMVNSQEICDFV 342 (389)
T ss_dssp HHHHHHHTCCEECC---CCEETTTBSCSBCEECGGGGGGTCBCCCEEEEEECCSSSCEEEEEECHHHHTTCCHHHHHHHH
T ss_pred HHHHHHcCCeEecccCCCccCCCeEeeEeeeCChhhccCCCCCCCceEEEEEcCCCCcEEEEEeCCcccCCCHHHHHHHH
Confidence 999854 55655554 3788999999988764 789999999999999999999999
Q ss_pred HHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCCccC
Q 028244 145 RYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPRIRS 199 (211)
Q Consensus 145 ~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~~~~ 199 (211)
.. ..+++++|+.|++.|+.+|+.||+|||||++..+.+..
T Consensus 343 ~~---------------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~~~ 382 (389)
T 4da1_A 343 NQ---------------CHDPNEAAHAVTEQAIQYGTEDNSTAVVVPFGAWGKYK 382 (389)
T ss_dssp HH---------------SSSHHHHHHHHHHHHHHHTCCSCEEEEEEEECCC----
T ss_pred Hh---------------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEecCCCCCC
Confidence 75 46899999999999999999999999999998875443
No 9
>2i44_A Serine-threonine phosphatase 2C; PSI-2, 8817Z, structural genomics, protein structure initiative; 2.04A {Toxoplasma gondii}
Probab=100.00 E-value=6.6e-34 Score=240.87 Aligned_cols=168 Identities=27% Similarity=0.360 Sum_probs=140.6
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeC---C-ccccCCCCCCCCChH
Q 028244 16 HRRWEAALCRSYERADDVFKDNS--LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRG---K-QAIPLTVDHKLDRED 89 (211)
Q Consensus 16 ~~~~~~~l~~a~~~~~~~l~~~~--~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~---~-~~~~lt~dH~~~~~~ 89 (211)
...+.++|.++|.++|+.+.... ......|+|++++++.++++|++||||||+|++++ | ++++||.||++.++.
T Consensus 106 ~~~~~~~l~~a~~~~~~~i~~~~~~~~~~~~g~gtt~~~i~~~~l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~ 185 (324)
T 2i44_A 106 PQLLDQAVDDMYKNADNELVKMCEQLNKDYASSTSVTAVLAKGFVAVGHLGDSRIAMGVETPNGLNCEFLTVDHKPDMPH 185 (324)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCSSCEECEEEEEEETTEEEEEEESSCEEEEEEEETTEEEEEESCCCCCTTSHH
T ss_pred chhHHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCeEEEEEECCeEEEEEccCceEEEEeccCCCceEEECCCCCCCcCHH
Confidence 45678999999999999998764 12233445555556899999999999999999997 6 899999999999999
Q ss_pred HHHHHHh---------------------------hCC----CCCC----------CccccCCcEEEEEecCCCeEEEEEc
Q 028244 90 EVARITN---------------------------GGD----HDLK----------PWVIAEPEVTFMTRSEDDEFLILAS 128 (211)
Q Consensus 90 e~~ri~~---------------------------lG~----~~~~----------~~v~~~p~i~~~~~~~~~~~lil~S 128 (211)
|++||.. +|+ +.++ +++++.|++..+.+.++++||||||
T Consensus 186 E~~Ri~~~Gg~v~~~~~~~~~~~~~~g~l~~sra~Gd~p~~~~~~~~~g~~~~~~~~v~~~pdv~~~~l~~~d~~llLaS 265 (324)
T 2i44_A 186 EKLRIMRNGGSVEYLHNHNNKPFIRGGDFSFRKSRGEQPMQLQYSRAFGGKDLKMYGLSNQPDVRVVRVTPQHRVMILAT 265 (324)
T ss_dssp HHHHHHHTTCEEECCTTCTTSCEEECTTHHHHHHTTCCCCCBSSSBCEECGGGTTTTCBCCCEEEEEECCTTEEEEEEEC
T ss_pred HHHHHHHcCCEEEecccccCCCccccCcccchhhcCCccccceeccccCCccccCCeEeecCEEEEEEcCCCCeEEEEEc
Confidence 9999852 777 3332 3568899999998887777999999
Q ss_pred CCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHH--HHHHHHHHHHhCCCCCceEEEEEEccC
Q 028244 129 DGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACG--AAEELVKIAYDAFSTDNISVVIVDLKA 194 (211)
Q Consensus 129 DGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~--~a~~L~~~A~~~~~~DNiTvivv~~~~ 194 (211)
||||++++++++.+++...+.. ..++.. +|+.|++.|+.+++.||+|||||++.+
T Consensus 266 DGl~d~ls~~ei~~~v~~~~~~-----------~~~~~~~~~a~~L~~~A~~~g~~DNiTvivv~~~~ 322 (324)
T 2i44_A 266 DGLWDVMSAAQAVEIAMQARQE-----------GRNPAQALVEMTLAEQQSRNQSADNITAMTVFFKK 322 (324)
T ss_dssp HHHHTTCCHHHHHHHHHHHHHT-----------TCCHHHHHHHHHHHHHHHTTCCCCCEEEEEEEEC-
T ss_pred CchhccCCHHHHHHHHHHHHhc-----------CCCHHHHHHHHHHHHHHHhcCCCCCCEEEEEEeeC
Confidence 9999999999999999876543 357888 999999999999999999999999964
No 10
>2j4o_A Mitogen-activated protein kinase kinase kinase 7-interacting protein 1; TGF-beta, pseudo-phosphatase, TAK1 binding protein, protein binding; 2.25A {Homo sapiens} PDB: 2pom_A 2pop_A
Probab=100.00 E-value=2.1e-34 Score=250.67 Aligned_cols=171 Identities=23% Similarity=0.373 Sum_probs=146.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHhhcC--------------C-----------------------CCCCCCceeEEEEEeCCe
Q 028244 15 WHRRWEAALCRSYERADDVFKDNS--------------L-----------------------APYSVGTTALVAILSPCQ 57 (211)
Q Consensus 15 ~~~~~~~~l~~a~~~~~~~l~~~~--------------~-----------------------~~~~~GtT~~~~~i~~~~ 57 (211)
....+.++|.++|..+|+.+.... + ....+|||++++++.+++
T Consensus 98 ~~~~~~~~l~~af~~~~~~i~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~GtTa~~~li~~~~ 177 (401)
T 2j4o_A 98 AEADVRRVLLQAFDVVERSFLESIDDALAEKASLQSQLPEGVPQHQLPPQYQKILERLKTLEREISGGAMAVVAVLLNNK 177 (401)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTSCTTCCSSCSCGGGHHHHHHHHHHHHHHCCEEEEEEEEEETTE
T ss_pred chhhHHHHHHHHHHHHHHHHHHHHHHHHhhhhcccccccccccccccccccchhhhhhhcccccCCCccCEEEEEEECCE
Confidence 456789999999999999886520 0 123689999999999999
Q ss_pred EEEEeccccceEEEeCC----ccccCCCCCCCCChHHHHHHHh----------------------hCCCCCC--------
Q 028244 58 IIASNCGDSRVVLSRGK----QAIPLTVDHKLDREDEVARITN----------------------GGDHDLK-------- 103 (211)
Q Consensus 58 ~~~anvGDSr~~l~~~~----~~~~lt~dH~~~~~~e~~ri~~----------------------lG~~~~~-------- 103 (211)
+|++||||||+|++|++ ++++||.||++.++.|+.||.. ||+..+|
T Consensus 178 l~vanvGDSRa~l~r~~~~g~~~~~LT~DH~~~~~~E~~Ri~~~Gg~v~~~~~~r~~g~l~vtRalGd~~~k~~~~~~~~ 257 (401)
T 2j4o_A 178 LYVANVGTNRALLCKSTVDGLQVTQLNVDHTTENEDELFRLSQLGLDAGKIKQVGIICGQESTRRIGDYKVKYGYTDIDL 257 (401)
T ss_dssp EEEEEESSCEEEEEEECSSSEEEEECSCCCSTTSHHHHHHHHTTTCCHHHHHHHCCBTTBCCSBCEECHHHHHSGGGSTT
T ss_pred EEEEEccCceEEEEEcCCCCceEEECCCCCCCCCHHHHHHHHHcCCCeeeccCccccCCcccccccCCHhhccccccccc
Confidence 99999999999999998 9999999999999999999865 5554433
Q ss_pred ------CccccCCcEEE-EEecCCCeEEEEEcCCccccC--------CHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHH
Q 028244 104 ------PWVIAEPEVTF-MTRSEDDEFLILASDGLWDVM--------SSDDAVKLARYELRRRRRLPEKGDTPSSPACGA 168 (211)
Q Consensus 104 ------~~v~~~p~i~~-~~~~~~~~~lil~SDGl~d~l--------~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~ 168 (211)
+++++.|++.. +.+.++|+|||||||||||++ +++++.+++...+.. ..+++.+
T Consensus 258 ~~~~~~~~v~~~Pdv~~~~~l~~~d~flvLaSDGlwd~l~~~~~~~~s~~ei~~~v~~~l~~-----------~~~~~~~ 326 (401)
T 2j4o_A 258 LSAAKSKPIIAEPEIHGAQPLDGVTGFLVLMSEGLYKALEAAHGPGQANQEIAAMIDTEFAK-----------QTSLDAV 326 (401)
T ss_dssp TTTCSSCSSBCCCEEEEEEECTTCCEEEEEECHHHHHHHHHHHCTTCHHHHHHHHHHHHHHH-----------CSSHHHH
T ss_pred ccccCCCCeeccceEEEeEEeCCCCcEEEEEccchhhcccccccCCCCHHHHHHHHHHHHhc-----------CCCHHHH
Confidence 46889999995 888888889999999999999 899999999987665 4589999
Q ss_pred HHHHHHHHHh-------CCC--------CCceEEEEEEccCCC
Q 028244 169 AEELVKIAYD-------AFS--------TDNISVVIVDLKAPR 196 (211)
Q Consensus 169 a~~L~~~A~~-------~~~--------~DNiTvivv~~~~~~ 196 (211)
|+.|++.|+. +|+ .||||||||+|....
T Consensus 327 a~~Lv~~A~~~~~~a~~~G~~~~~~~~~~DNiTvivv~~~~~~ 369 (401)
T 2j4o_A 327 AQAVVDRVKRIHSDTFASGGERARFCPRHEDMTLLVRNFGYPL 369 (401)
T ss_dssp HHHHHHHHHHHHHHHHHSCSSGGGGCSEECCEEEEEEEEBCCC
T ss_pred HHHHHHHHHHhhhhhhhcCCcccccCCCCCCeEEEEEEcCCCC
Confidence 9999999975 665 899999999998653
No 11
>3d8k_A PP2C, protein phosphatase 2C; nysgrc, PSI-II, STR genomics, protein structure initiative, NEW YORK structural research consortium, nysgxrc; 2.71A {Toxoplasma gondii}
Probab=100.00 E-value=1.2e-33 Score=243.89 Aligned_cols=166 Identities=27% Similarity=0.336 Sum_probs=139.9
Q ss_pred HHHHHHHHHHHHHHHHhhcCCCCCCCCceeEEEEEe--------------------------------------------
Q 028244 19 WEAALCRSYERADDVFKDNSLAPYSVGTTALVAILS-------------------------------------------- 54 (211)
Q Consensus 19 ~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~-------------------------------------------- 54 (211)
..++|.++|.++|+.+.... ..+|||++++++.
T Consensus 81 ~~~al~~af~~~d~~l~~~~---~~~GtTa~~~~i~~~~~~~~~~~~g~~~~p~~~~~~~~~~~~~g~ta~a~vali~~~ 157 (377)
T 3d8k_A 81 NEEEITRQFERMDGDLRAAN---LPGGSSALIIFVRYEKKPTEARVVGRQIVPEGAKEFTSVAEALGGPLMPVVAMNFRR 157 (377)
T ss_dssp SHHHHHHHHHHHHHHHHHHT---CCCCBCEEEEEEEEESSCCCEEEETTEEECCC---CCCHHHHSSCCCCCCEEECGGG
T ss_pred HHHHHHHHHHHHHHHHHhcc---cCCCCceEEEEEeccccccccccccccccccccccccccccccccccccceeeeccc
Confidence 46889999999999999874 3589999998874
Q ss_pred -------CCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHHHHh-----------------------hCCCCCC-
Q 028244 55 -------PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITN-----------------------GGDHDLK- 103 (211)
Q Consensus 55 -------~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~-----------------------lG~~~~~- 103 (211)
++++|++||||||+|++|+|++.+||.||++.++.|+.||.. ||+..+|
T Consensus 158 ~p~~~~~~~~l~vanvGDSRa~l~r~g~~~~LT~DH~~~~~~E~~RI~~~gg~v~~~~g~~rv~G~l~vtRalGd~~~k~ 237 (377)
T 3d8k_A 158 DPRAAKGIYTIHVASLGNSRCVLKSGRTAIHLSTPHTASSHKERHRVQAAGGVFTTVNGELLLGGVVPMTRAFGSFDFKK 237 (377)
T ss_dssp CGGGTTCEEEEEEEEESSCEEEEEETTEEEESSCCCSSSSHHHHHHHHTTTCCEEECSSSEEETTTBSCSBCSSCGGGSC
T ss_pred ccccccCCCeEEEEEcccceEEEEECCEEEECCcCCCCCCHHHHHHHHHcCCEEEecCCcEEEcCceecceeecChhhhc
Confidence 148999999999999999999999999999999999999865 6666655
Q ss_pred --------CccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHH
Q 028244 104 --------PWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKI 175 (211)
Q Consensus 104 --------~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~ 175 (211)
+.+++.|++..+.+.++| +|||||||||++++++++.+.+...+.. ...++..+|+.|++.
T Consensus 238 ~~~~~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~ls~~e~v~~v~~~~~~----------~~~~~~~~a~~Lv~~ 306 (377)
T 3d8k_A 238 GGQGKLQQDLVSAVPDVTTFFAYPGD-DIVAGTAGAFAHFRSHAAIAAAIALYPV----------SPETVLDAAKAMVVN 306 (377)
T ss_dssp C---CCSSCSSBCCCEEEEEEECTTC-EEEEECGGGGCSCSSHHHHHHHHTTSCC----------CGGGHHHHHHHHHHT
T ss_pred ccccccccCccccCCcEEEEEcCCCC-EEEEEECCcccCCCcHHHHHHHHHHhhc----------cCCCHHHHHHHHHHH
Confidence 467899999999887765 8999999999999999987755431100 024789999999999
Q ss_pred HHhCCCCCceEEEEEEccCCCcc
Q 028244 176 AYDAFSTDNISVVIVDLKAPRIR 198 (211)
Q Consensus 176 A~~~~~~DNiTvivv~~~~~~~~ 198 (211)
|+.+|+.||||||||++......
T Consensus 307 A~~~g~~DNiTvivv~~~~~~~~ 329 (377)
T 3d8k_A 307 AKRRKVTKNISTFVRHLPESRTR 329 (377)
T ss_dssp TTTSSCCSCCCEEEEECCSSCCC
T ss_pred HHhcCCCCCEEEEEEEecCCcch
Confidence 99999999999999999876543
No 12
>2isn_A NYSGXRC-8828Z, phosphatase; pathogenic strain, praseodymium, sulfate structural genomics, PSI-2, protein structure initiative; 1.90A {Toxoplasma gondii}
Probab=100.00 E-value=6.6e-33 Score=238.42 Aligned_cols=181 Identities=27% Similarity=0.340 Sum_probs=144.2
Q ss_pred HHHhhhhhCC-CchHHHHHHHHHHHHHHHHHHHhhcCCCCCCCCceeEEEEEeC--------------------------
Q 028244 3 AEEWGREAGN-DGWHRRWEAALCRSYERADDVFKDNSLAPYSVGTTALVAILSP-------------------------- 55 (211)
Q Consensus 3 ~~~l~~~~~~-~~~~~~~~~~l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~~-------------------------- 55 (211)
++.|.+.+.. ..+ ..+.|+++|..+|+.+.........+|||++++++.+
T Consensus 62 ~~~l~~~l~~~~~~---~~~~l~~a~~~~d~~i~~~~~~~~~~GtT~v~~~i~~~~~p~~~~~~g~~~~~~~~~~~f~~l 138 (364)
T 2isn_A 62 AKHAAKHLGKLSEF---TFAEVKKACLSLDAEIIRKLGPKHVAGSTGIIVAIERLSAPVVENVVGREIVPRAHEETFVPL 138 (364)
T ss_dssp HHHHHHHHTTCSSC---CHHHHHHHHHHHHHHHHHHHCSSSCCEECEEEEEEEECSSCEEEEEETTEECCC-----CCCH
T ss_pred HHHHHHHHHHhhcc---cHHHHHHHHHHHHHHHHHhcccCCCCCcceehhhhhccccccccccccccccccccccchhhh
Confidence 4555555532 222 2467899999999999876533467999999998852
Q ss_pred ----------------------------------CeEEEEeccccceEEE-eCCccccCCCCCCCCChHHHHHHHh----
Q 028244 56 ----------------------------------CQIIASNCGDSRVVLS-RGKQAIPLTVDHKLDREDEVARITN---- 96 (211)
Q Consensus 56 ----------------------------------~~~~~anvGDSr~~l~-~~~~~~~lt~dH~~~~~~e~~ri~~---- 96 (211)
.++|++||||||+|++ |+|++.+||.||++.++.|+.||..
T Consensus 139 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~l~vanvGDSRayl~~r~g~~~~LT~DH~~~~~~e~~rI~~~gG~ 218 (364)
T 2isn_A 139 EKLIQEEEEAEHPELVGRYPRVPDVQQKTIPAGSFLVTAINIGDSRATLIHSDGGLTRLSKDHKPNHPTEASRIEKAGGS 218 (364)
T ss_dssp HHHHHHHHHC-----CCSSCCCCCCEEEEECTTCEEEEEEEESSCEEEEECTTSCEEECCCCCCTTSHHHHHHHHHTTCC
T ss_pred hhhhhhhhhcccccccccccccccccccccccCccEEEEEECccCEEEEEeeCCEEEEcCcCCCCCCHHHHHHHHHcCCe
Confidence 3899999999999999 6899999999999999999988844
Q ss_pred ------------------hCCCCCC---------CccccCCcEEEEEecCCCeEEEEEcCCccccCC--HHHHHHHHHHH
Q 028244 97 ------------------GGDHDLK---------PWVIAEPEVTFMTRSEDDEFLILASDGLWDVMS--SDDAVKLARYE 147 (211)
Q Consensus 97 ------------------lG~~~~~---------~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~--~~~i~~ii~~~ 147 (211)
||+..+| +.+++.|++..+.+.+++ ||||||||||++++ ++++.+++...
T Consensus 219 v~~~~~~rv~g~l~ltRalGd~~~k~~~~l~~~~~~v~~~Pdv~~~~l~~~D-~llL~SDGl~d~l~~~~~~v~~~~~~~ 297 (364)
T 2isn_A 219 VETFDVPRVDGVLALSRAFGDSDFKMNPNLPPEEQKVIAVPDVRQFYALSSD-LLLLACDGVYEPSGMDWAYVRDLTVAE 297 (364)
T ss_dssp EEESSSEEETTTBSCSBCEECGGGSCCCSSCGGGSSSBCCCEEEEEEECTTC-EEEEECHHHHCSSSCCHHHHHHHHHHH
T ss_pred EecCCCcccCCceeeEEEecchhhccccccCcccCceEEEeEEEEEECCCCC-EEEEEcCCCCCCCCCCHHHHHHHHHHH
Confidence 6666554 356789999998877765 99999999999976 88888776543
Q ss_pred HHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCCc
Q 028244 148 LRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPRI 197 (211)
Q Consensus 148 ~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~~ 197 (211)
+... ..++..+|+.|++.|+.+|+.||+|||||++.....
T Consensus 298 ~~~~----------~~~~~~~a~~Lv~~A~~~g~~DNiTvivv~~~~~~~ 337 (364)
T 2isn_A 298 MQRS----------KGDLEEVAARVMDYAYDMNSQDNISVMLVAFHNQEV 337 (364)
T ss_dssp HHHT----------TSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECSSCC
T ss_pred Hhhc----------CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEcCCCCC
Confidence 3221 457999999999999999999999999999976543
No 13
>2pnq_A [pyruvate dehydrogenase [lipoamide]]-phosphatase 1; pyruvate dehydrogenase phosphatase 1, catalytic subunit, PDP1C, hydrolase; 1.81A {Rattus norvegicus} PDB: 3n3c_A 3mq3_A
Probab=100.00 E-value=6.6e-34 Score=251.53 Aligned_cols=177 Identities=30% Similarity=0.449 Sum_probs=140.8
Q ss_pred HHHHHHHHHHHHHHHHHhhcCC-------------CCCCCCceeEEEEEeCCeEEEEeccccceEEEeC---C--ccccC
Q 028244 18 RWEAALCRSYERADDVFKDNSL-------------APYSVGTTALVAILSPCQIIASNCGDSRVVLSRG---K--QAIPL 79 (211)
Q Consensus 18 ~~~~~l~~a~~~~~~~l~~~~~-------------~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~---~--~~~~l 79 (211)
.+.++|.+||.++|+.|..... ....+|||++++++.++++|+||+||||+|+++. | .+++|
T Consensus 160 ~~~~aL~~af~~~d~~i~~~~~~~~~~~~~~~~~~~~~~~GtTa~v~li~~~~l~vAnvGDSRa~l~r~~~~g~~~~~~L 239 (467)
T 2pnq_A 160 DVKEALINAFKRLDNDISLEAQVGDPNSFLNYLVLRVAFSGATACVAHVDGVDLHVANTGDSRAMLGVQEEDGSWSAVTL 239 (467)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCCSSHHHHHHHHHHHHSEECEEEEEEETTEEEEEEESSCEEEEEEECTTSCEEEEEC
T ss_pred hHHHHHHHHHHHHHHHHHHhhhhcccccccccccccCCCCcceEEEEEEECCEEEEEECCCceEEEEEecCCCcEEEEEC
Confidence 5788999999999999986531 2346999999999999999999999999999994 6 79999
Q ss_pred CCCCCCCChHHHHHHHh-------------------------hCCCCCC-------------------------------
Q 028244 80 TVDHKLDREDEVARITN-------------------------GGDHDLK------------------------------- 103 (211)
Q Consensus 80 t~dH~~~~~~e~~ri~~-------------------------lG~~~~~------------------------------- 103 (211)
|.||++.++.|.+||.. |||..+|
T Consensus 240 T~DH~~~~~~E~~Ri~~~g~~~~~~~~~~~~Rv~G~l~vtRAlGd~~~K~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~~ 319 (467)
T 2pnq_A 240 SNDHNAQNERELQRLKLEHPKNEAKSVVKQDRLLGLLMPFRAFGDVKFKWSIDLQKRVIESGPDQLNDNEYTKFIPPNYH 319 (467)
T ss_dssp CCCCSTTCHHHHHHHHHTSCGGGHHHHBSSSSBTTTBSSSBCEECGGGTSCHHHHHHHHSSSCC-----------CTTCS
T ss_pred CCCCCCCCHHHHHHHHHcCCCcccceeEecCccccccccchhcCchhhcccchhhhhhhccccccccccccccccccccc
Confidence 99999999999999864 6776544
Q ss_pred --CccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccC-CCCC---CC-----------------C
Q 028244 104 --PWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRR-LPEK---GD-----------------T 160 (211)
Q Consensus 104 --~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~-~~~~---~~-----------------~ 160 (211)
|++++.|++..+.+.++|.||||||||||++|+++++.+++...+..... .+.. .+ .
T Consensus 320 ~~p~v~~~Pdv~~~~l~~~D~fLVLaSDGLwd~ls~~eiv~iv~~~~~~~~~~~p~~~~~~~~~~~~~~~~l~~r~~~~~ 399 (467)
T 2pnq_A 320 TPPYLTAEPEVTYHRLRPQDKFLVLATDGLWETMHRQDVVRIVGEYLTGMHHQQPIAVGGYKVTLGQMHGLLTERRAKMS 399 (467)
T ss_dssp SSCCCBCCCEEEEEECCTTEEEEEEECHHHHTTSCHHHHHHHHHHHHTTCSSCC--------------------------
T ss_pred CCCcccccceEEEEEcCCCCeEEEEEecCccccCChHHHHHHHHHHHhhccccCcccccccCccHHHHHHHHHHhhhccc
Confidence 34889999999999998889999999999999999999999987643210 0000 00 0
Q ss_pred CCCcHHHHHHHHHHHHHhCC-----------------------CCCceEEEEEEccC
Q 028244 161 PSSPACGAAEELVKIAYDAF-----------------------STDNISVVIVDLKA 194 (211)
Q Consensus 161 ~~~~~~~~a~~L~~~A~~~~-----------------------~~DNiTvivv~~~~ 194 (211)
.....+++|..|++.|+.++ ..||||||||+|..
T Consensus 400 ~~~~~~naA~~Lir~Al~~~~~Ge~~~~~~~~ll~~~~~~~R~~~DdITViVv~~~~ 456 (467)
T 2pnq_A 400 SVFEDQNAATHLIRHAVGNNEFGAVDHERLSKMLSLPEELARMYRDDITIIVVQFNS 456 (467)
T ss_dssp -----CCHHHHHHHHHHC-------------------------CCSCEEEEEEEECH
T ss_pred CCchhhHHHHHHHHHHhcCCCcCcchHHHHHhhhcCCccccccCCCCcEEEEEEeCc
Confidence 00112578999999999865 38999999999964
No 14
>2pk0_A Serine/threonine protein phosphatase STP1; SI motif, signaling protein; 2.65A {Streptococcus agalactiae}
Probab=99.97 E-value=3.3e-31 Score=216.20 Aligned_cols=158 Identities=24% Similarity=0.254 Sum_probs=132.5
Q ss_pred HHHHHHHHHHHHHHHHHHHhhcC--CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHH-
Q 028244 16 HRRWEAALCRSYERADDVFKDNS--LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVA- 92 (211)
Q Consensus 16 ~~~~~~~l~~a~~~~~~~l~~~~--~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~- 92 (211)
...+.+.|.++|..+|+.+.... .....+|||++++++.+++++++|+||||+|++|++++.+||.||++.++.+..
T Consensus 72 ~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~gtT~~~~~i~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g 151 (250)
T 2pk0_A 72 LSEIRDWMLVSIETENRKIYELGQSDDYKGMGTTIEAVAIVGDNIIFAHVGDSRIGIVRQGEYHLLTSDHSLVNELVKAG 151 (250)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTCTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTT
T ss_pred hhhHHHHHHHHHHHHHHHHHHHHhhCCCCCCcceEEEEEEECCeEEEEEeCCCeEEEEcCCcEEEeCCCCCHHHHHHHcC
Confidence 56788999999999999998875 224679999999999999999999999999999999999999999985432110
Q ss_pred --------HHH-------hhCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCC
Q 028244 93 --------RIT-------NGGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEK 157 (211)
Q Consensus 93 --------ri~-------~lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~ 157 (211)
... .+|+. ..+.|++..+++.+++ +|||||||||++++++++.+++..
T Consensus 152 ~i~~~~~~~~~~~~~ltralG~~-----~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~~~~----------- 214 (250)
T 2pk0_A 152 QLTEEEAASHPQKNIITQSIGQA-----NPVEPDLGVHLLEEGD-YLVVNSDGLTNMLSNADIATVLTQ----------- 214 (250)
T ss_dssp SSCHHHHHTCCSCCCBSCCBSCS-----SCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHTS-----------
T ss_pred CCCHHHHHhCCCcceEEeecCCC-----CCccceEEEEEcCCCC-EEEEECCCCCCCcCHHHHHHHHhc-----------
Confidence 000 05553 2458999888777655 899999999999999999999874
Q ss_pred CCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccC
Q 028244 158 GDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKA 194 (211)
Q Consensus 158 ~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~ 194 (211)
..+++.+|+.|++.|+.+++.||+||||+++.+
T Consensus 215 ----~~~~~~~a~~L~~~a~~~g~~DniTvivv~~~~ 247 (250)
T 2pk0_A 215 ----EKTLDDKNQDLITLANHRGGLDNITVALVYVES 247 (250)
T ss_dssp ----SSCHHHHHHHHHHHHHHTTCCSCEEEEEEEECC
T ss_pred ----CCCHHHHHHHHHHHHHHcCCCCCeEEEEEEeeC
Confidence 458999999999999999999999999999974
No 15
>1txo_A Putative bacterial enzyme; serine/threonine protein phosphatases, PSTP/PPP, structural genomics, PSI, protein structure initiative; 1.95A {Mycobacterium tuberculosis} SCOP: d.219.1.1 PDB: 2cm1_A
Probab=99.97 E-value=4.9e-31 Score=213.56 Aligned_cols=159 Identities=23% Similarity=0.248 Sum_probs=127.1
Q ss_pred HHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHHH-HH
Q 028244 18 RWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEV-AR 93 (211)
Q Consensus 18 ~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~-~r 93 (211)
++.+.|.++|..+|+.+.... +....+|||++++++.+++++++|+||||+|++|++++.+||.||++.+.... .+
T Consensus 65 ~~~~~l~~a~~~~~~~i~~~~~~~~~~~~~gtT~~~~~i~~~~l~~a~vGDsr~~l~r~g~~~~lt~dh~~~~~~~~~G~ 144 (237)
T 1txo_A 65 DLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQITKDDTFVQTLVDEGR 144 (237)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEECSCCCBHHHHHHHTTS
T ss_pred hHHHHHHHHHHHHHHHHHHHHhhCCCCCCCcceEEEEEEECCEEEEEEEccCcEEEEeCCEeEEeCCCCCHHHHHHHcCC
Confidence 678889999999999998754 23356899999999999999999999999999999999999999997532110 00
Q ss_pred HHh-------hCCCCCC--CccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 028244 94 ITN-------GGDHDLK--PWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSP 164 (211)
Q Consensus 94 i~~-------lG~~~~~--~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~ 164 (211)
+.. .+....+ ....+.|++..+++.+++ +|||||||||++++++++.+++. ..+
T Consensus 145 i~~~~~~~~~~~~~~tr~lg~~~~~p~~~~~~l~~~d-~lvl~SDGl~d~l~~~~i~~~~~----------------~~~ 207 (237)
T 1txo_A 145 ITPEEAHSHPQRSLIMRALTGHEVEPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQ----------------IPE 207 (237)
T ss_dssp SCTTGGGGCTTTTCBCCCBSSSCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT----------------SSS
T ss_pred CCHHHHhhCccccceeeccCCCCccceEEEEecCCCC-EEEEECCCCCCCCCHHHHHHHHh----------------cCC
Confidence 000 0100000 013468999888777665 78999999999999999999986 357
Q ss_pred HHHHHHHHHHHHHhCCCCCceEEEEEEcc
Q 028244 165 ACGAAEELVKIAYDAFSTDNISVVIVDLK 193 (211)
Q Consensus 165 ~~~~a~~L~~~A~~~~~~DNiTvivv~~~ 193 (211)
|+.+|+.|++.|+.+++.||+||||+++.
T Consensus 208 ~~~~a~~L~~~a~~~g~~DniTvivv~~~ 236 (237)
T 1txo_A 208 VAESAHRLIELALRGGGPDNVTVVVADLE 236 (237)
T ss_dssp HHHHHHHHHHHHHHTTCCSCEEEEEEEEE
T ss_pred HHHHHHHHHHHHHHcCCCCCeEEEEEEee
Confidence 99999999999999999999999999985
No 16
>2j82_A TPPHA, protein serine-threonine phosphatase; PP2C family phosphatase, hydrolase; 1.28A {Synechococcus elongatus} PDB: 2j86_A 2y09_A 2xzv_A
Probab=99.96 E-value=1.6e-29 Score=204.91 Aligned_cols=154 Identities=23% Similarity=0.267 Sum_probs=126.7
Q ss_pred HHHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEe--CCeEEEEeccccceEEEeCCccccCCCCCCCCChHH-
Q 028244 17 RRWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDE- 90 (211)
Q Consensus 17 ~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e- 90 (211)
..+.+.|.++|.++|+.+.... +....+|||++++++. +++++++|+||||+|++|++++.+||.||++.++.+
T Consensus 66 ~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtT~~~~~i~~~~~~l~~anvGDsr~~l~r~~~~~~lt~dh~~~~~~~~ 145 (240)
T 2j82_A 66 HDPVTLLRQAFLAANHAIVEQQRQNSARADMGTTAVVILLDEKGDRAWCAHVGDSRIYRWRKDQLQQITSDHTWIAQAVQ 145 (240)
T ss_dssp TSHHHHHHHHHHHHHHHHHHHHTTSCSCTTCCBCEEEEEECTTSSEEEEEEESSCEEEEEETTEEEECSCCCBHHHHC--
T ss_pred hhHHHHHHHHHHHHHHHHHHHhhcccCCCCCCceEEEEEEEecCCEEEEEEEccCceEEEeCCEEEEECCCCcHHHHHHH
Confidence 3577889999999999998864 2345689999999999 999999999999999999999999999999853211
Q ss_pred HHHH--------Hh-------hCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCC
Q 028244 91 VARI--------TN-------GGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLP 155 (211)
Q Consensus 91 ~~ri--------~~-------lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~ 155 (211)
..++ .. +|+. ..+.|++..+++.+++ +|||||||||++++++++.+++.
T Consensus 146 ~g~i~~~~~~~~~~~~~ltralG~~-----~~~~p~~~~~~l~~gd-~lll~SDGl~d~l~~~~i~~~l~---------- 209 (240)
T 2j82_A 146 LGSLTIEQARQHPWRHVLSQCLGRE-----DLSQIDIQPIDLEPGD-RLLLCSDGLTEELTDDVISIYLS---------- 209 (240)
T ss_dssp --------------CCCBSCCBSCT-----TCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT----------
T ss_pred cCCCCHHHHhcCCCcCeEeecCCCC-----CceeEEEEEEeeCCCC-EEEEECCCCCCCCCHHHHHHHHc----------
Confidence 1111 11 5552 3458999888777665 79999999999999999999886
Q ss_pred CCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEc
Q 028244 156 EKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDL 192 (211)
Q Consensus 156 ~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~ 192 (211)
..+++.+|+.|++.|+.+++.||+|+||+++
T Consensus 210 ------~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 240 (240)
T 2j82_A 210 ------EPNVQKAAAALVDAAKTHGGRDNVTVVVISV 240 (240)
T ss_dssp ------CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEC
T ss_pred ------cCCHHHHHHHHHHHHHHcCCCCCeEEEEEeC
Confidence 2479999999999999999999999999975
No 17
>2jfr_A Ser-Thr phosphatase MSPP; hydrolase, PPM phosphatase, manganese, phosphate; 0.83A {Mycobacterium smegmatis} PDB: 2jfs_A 2jft_A 2v06_A
Probab=99.96 E-value=1.1e-28 Score=199.40 Aligned_cols=151 Identities=26% Similarity=0.211 Sum_probs=123.9
Q ss_pred HHHHHHHHHHHHHHHhhcC-CCCCCCCceeEEEEEeCCe---EEEEeccccceEEEeCCccccCCCCCCCCChHHH----
Q 028244 20 EAALCRSYERADDVFKDNS-LAPYSVGTTALVAILSPCQ---IIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEV---- 91 (211)
Q Consensus 20 ~~~l~~a~~~~~~~l~~~~-~~~~~~GtT~~~~~i~~~~---~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~---- 91 (211)
...|.++|.++|+.+.... .....+|||++++++.+++ ++++|+||||+|++|++++.+||.||++..+...
T Consensus 63 ~~~l~~~~~~~~~~l~~~~~~~~~~~gtT~~~~~i~~~~~~~l~~anvGDsr~~l~r~g~~~~lt~dh~~~~~~~~~g~i 142 (234)
T 2jfr_A 63 RDGLLEAVQQANLRVFELLGDEPTVSGTTLTAVAVFEPGQGGPLVVNIGDSPLYRIRDGHMEQLTDDHSVAGELVRMGEI 142 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTSSSCCEECEEEEECCCGGGTSCEEEEESSCCEEEEETTEEEECSCCCBHHHHHHHTTSS
T ss_pred HHHHHHHHHHHHHHHHHhhccCCCCCCccEEEEEEECCCccEEEEEEEccCceEEEECCEEEEeCCCCCHHHHHHHcCCC
Confidence 6778999999999998764 2222299999999999998 9999999999999999999999999998532110
Q ss_pred -----HHHH-------hhCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCC
Q 028244 92 -----ARIT-------NGGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGD 159 (211)
Q Consensus 92 -----~ri~-------~lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~ 159 (211)
.... .+|+ ...+.|++..+++.+++ +|||||||||++++++++.+++ .
T Consensus 143 ~~~~~~~~~~~~~~tralG~-----~~~~~~~~~~~~l~~gd-~lll~SDGl~d~~~~~~i~~~~-~------------- 202 (234)
T 2jfr_A 143 TRHEARWHPQRHLLTRALGI-----GPHIGPDVFGIDCGPGD-RLLISSDGLFAAADEALIVDAA-T------------- 202 (234)
T ss_dssp CHHHHTTCTTTTCBSCCBSS-----SSCCCCEEEECCCCTTC-EEEEECGGGGTTSCHHHHHHHH-T-------------
T ss_pred CHHHHhcCcccceeeecCcC-----CCCceeEEEEEecCCCC-EEEEECCCCccccCHHHHHHHH-c-------------
Confidence 0000 0444 23458888888666654 8899999999999999999988 4
Q ss_pred CCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEc
Q 028244 160 TPSSPACGAAEELVKIAYDAFSTDNISVVIVDL 192 (211)
Q Consensus 160 ~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~ 192 (211)
..++..+|+.|++.|+.+++.||+|+||+++
T Consensus 203 --~~~~~~~a~~l~~~a~~~g~~DniTvivv~~ 233 (234)
T 2jfr_A 203 --SPDPQVAVRRLVEVANDAGGSDNTTVVVIDL 233 (234)
T ss_dssp --CSSHHHHHHHHHHHHHHTTCCSCEEEEEEEE
T ss_pred --cCCHHHHHHHHHHHHHHcCCCCCeEEEEEEe
Confidence 5689999999999999999999999999987
No 18
>3rnr_A Stage II sporulation E family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; HET: MSE; 2.00A {Thermanaerovibrio acidaminovorans}
Probab=99.96 E-value=2.4e-29 Score=200.90 Aligned_cols=144 Identities=19% Similarity=0.184 Sum_probs=109.4
Q ss_pred HHHHHHHHHHHhhcC---CCCCCCCceeEEEEEe--CCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHH-----
Q 028244 24 CRSYERADDVFKDNS---LAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVAR----- 93 (211)
Q Consensus 24 ~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~r----- 93 (211)
.+++..+|+.+.... +....+|||++++++. ++++|++|+||||+|++|++++.+||.||++.++.....
T Consensus 47 ~~~~~~an~~l~~~~~~~~~~~~~GtT~~~~~i~~~~~~~~~anvGDSr~yl~r~g~~~~lt~dh~~~~~~~~~g~~~~~ 126 (211)
T 3rnr_A 47 LDAVLAAQAAVHRWASQGGILGRTGATMAVAAVNLRDGTLEWASVGDCRVYLFKGGRLSRLSLDHNVSSEMVLLGRGPVP 126 (211)
T ss_dssp HHHHHHHHHHHHHHHHHTTCTTSCCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEEECCCCCBHHHHHHHTTSCCCC
T ss_pred HHHHHHHHHHHHHHHhhccCCCCcchhheeeeeeeCCCEEEEEEEccCeEEEEeCCEEEEECCCcHHHHHHHHcCCChhh
Confidence 478888888888764 4556799999999999 999999999999999999999999999999853221110
Q ss_pred ------H-HhhCCCCCCCccccCCcE--EEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCc
Q 028244 94 ------I-TNGGDHDLKPWVIAEPEV--TFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSP 164 (211)
Q Consensus 94 ------i-~~lG~~~~~~~v~~~p~i--~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~ 164 (211)
+ ..+|.. ....|++ ..+++.+++ +|||||||||++++++++.+++.. ..+
T Consensus 127 ~~~~~~ltralG~~-----~~~~~~~~~~~~~l~~gd-~llL~SDGl~d~~~~~~i~~~l~~---------------~~~ 185 (211)
T 3rnr_A 127 GPAGEMITSFIGIE-----NLTEISTSEAPLPLEAGE-GVLVVSDGVYRSLHEDRIAMALSR---------------GSD 185 (211)
T ss_dssp SHHHHCBSCCBTCS-----SCCCCEECSSCEECCTTC-EEEEEEC-----CCTTEEEEEECT---------------TSC
T ss_pred CCCccEEecccCCC-----CCcceeEecceecCCCCC-EEEEEcCCCCCCcCHHHHHHHHhc---------------CCh
Confidence 0 115552 2236777 556555555 789999999999999999888863 222
Q ss_pred HHHHHHHHHHHHHhCC--CCCceEEEEEEc
Q 028244 165 ACGAAEELVKIAYDAF--STDNISVVIVDL 192 (211)
Q Consensus 165 ~~~~a~~L~~~A~~~~--~~DNiTvivv~~ 192 (211)
|+.|++.|++++ +.||+|||||++
T Consensus 186 ----a~~L~~~a~~~g~~~~DNiTvivv~L 211 (211)
T 3rnr_A 186 ----ARGILQEVEAQGRPYQDNATLALVIL 211 (211)
T ss_dssp ----HHHHHHHHHHSCTTSCSSCEEEEEEC
T ss_pred ----HHHHHHHHHHcCCCCCCceEEEEEeC
Confidence 999999999999 999999999985
No 19
>3t91_A Stage II sporulation protein E; SPOIIE, phosphatase, manganese binding, PP2C PH domain; HET: GL0 MAN; 2.64A {Bacillus subtilis} PDB: 3t9q_A*
Probab=99.78 E-value=6.5e-18 Score=136.81 Aligned_cols=144 Identities=14% Similarity=0.144 Sum_probs=104.0
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHHHHhhCCC
Q 028244 23 LCRSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGDH 100 (211)
Q Consensus 23 l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~lG~~ 100 (211)
+..++..+|+.+.... ...+++|++++++. .++++++|+||||+|++|++++.+++.++.+ +|-.
T Consensus 72 ~~~~l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------lG~~ 138 (242)
T 3t91_A 72 EKIAIKTINSILSLRT--TDEIYSTLDLSIIDLQDASCKFLKVGSTPSFIKRGDQVMKVQASNLP-----------IGII 138 (242)
T ss_dssp HHHHHHHHHHHHTTC------CCCCEEEEEEETTTCEEEEEEESCCCEEEEETTEEEECCCC----------------CC
T ss_pred HHHHHHHHHHHHHhcC--CCCeEeEEEEEEEECCCCEEEEEcCCCCceEEEECCEEEEecCCCce-----------eEec
Confidence 4567788898887753 34688999999997 6799999999999999999999999876555 5542
Q ss_pred CCCCccccCCcEEEEEecCCCeEEEEEcCCccccCC-----HHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHH
Q 028244 101 DLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMS-----SDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKI 175 (211)
Q Consensus 101 ~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~-----~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~ 175 (211)
. . ..++...+.+.+ ++.|+|||||||+.++ ...+.+++... . ..+++++++.|++.
T Consensus 139 ~---~--~~~~~~~~~l~~-GD~lll~SDGl~e~~~~~~~~~~~~~~ll~~~----~---------~~~~~~~~~~l~~~ 199 (242)
T 3t91_A 139 N---E--FDVEVVSEQLKA-GDLLIMMSDGIFEGPKHVENHDLWMKRKMKGL----K---------TNDPQEIADLLMEE 199 (242)
T ss_dssp C---T--TCEEEEEEECCT-TCEEEEECHHHHTCSTTCSCHHHHHHHHHHTC----C---------CCCHHHHHHHHHHH
T ss_pred C---C--CcceEEEEEeCC-CCEEEEECCCcccCCCcccchHHHHHHHHHHh----c---------CCCHHHHHHHHHHH
Confidence 1 1 134445554444 5589999999999998 45555655421 1 46799999999999
Q ss_pred HHhCC-C--CCceEEEEEEccCCCcc
Q 028244 176 AYDAF-S--TDNISVVIVDLKAPRIR 198 (211)
Q Consensus 176 A~~~~-~--~DNiTvivv~~~~~~~~ 198 (211)
+...+ . .||+|++++++....+.
T Consensus 200 ~~~~~~~~~~DDiTvv~i~~~~~~~~ 225 (242)
T 3t91_A 200 VIRTRSGQIEDDMTVVVVRIDHNTPK 225 (242)
T ss_dssp HHHHTTSCCCSCEEEEEEEEEECCCC
T ss_pred HHHHcCCCCCCceEEEEEEEecCCCc
Confidence 98765 3 69999999999876444
No 20
>3pu9_A Protein serine/threonine phosphatase; PSI-biology, MCSG, structural genomics; HET: MSE; 1.55A {Sphaerobacter thermophilus}
Probab=99.74 E-value=5.5e-17 Score=131.71 Aligned_cols=141 Identities=17% Similarity=0.135 Sum_probs=107.3
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHHHHhhCCC
Q 028244 23 LCRSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGDH 100 (211)
Q Consensus 23 l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~lG~~ 100 (211)
+..++.++|+.+.... ...+++|++++++. .++++++|+||+++|+++++++.+++.+|.+ +|-.
T Consensus 75 ~~~~l~~~n~~l~~~~--~~~~~~T~~~~~id~~~~~l~~~~aG~~~~~l~r~g~~~~l~~~~~~-----------lG~~ 141 (242)
T 3pu9_A 75 DGAAARAAHDFLYAMR--DGKVSAALDILSVDLASRSVLVTRNSEVPMLLGRNGEFEQISESGGR-----------IGIY 141 (242)
T ss_dssp HHHHHHHHHHHHHHHT--TTCCCEEEEEEEEETTTTEEEEEEESCCCEEEEETTEEEEECCCCCC-----------BSSC
T ss_pred HHHHHHHHHHHHHhcc--CCCcEEEEEEEEEECCCCEEEEEeCCCCcEEEEECCEEEEeCCCCcc-----------cccc
Confidence 3467888888887653 33578999999986 5699999999999999999999999998876 6642
Q ss_pred CCCCccccCCcEEEEEecCCCeEEEEEcCCccccCC-------HHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHH
Q 028244 101 DLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMS-------SDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELV 173 (211)
Q Consensus 101 ~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~-------~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~ 173 (211)
. . ..++...+.+.+ ++.|+||||||++..+ .+++..++.. . ..+++++++.|+
T Consensus 142 ~---~--~~~~~~~~~l~~-Gd~lll~TDGl~e~~~~~~~~~g~~~l~~l~~~-----~---------~~~~~~~~~~l~ 201 (242)
T 3pu9_A 142 R---H--TRPRVLEFPAEP-GLTVILVSDGIIGAGGRRGQPLEFLATGGRVAG-----P---------ETPAQAIADELL 201 (242)
T ss_dssp T---T--CCCEEEEEECCT-TCEEEEECHHHHTTTTTTTCCCCHHHHHHHHCC-----T---------TCCHHHHHHHHH
T ss_pred C---C--CCceEEEEEeCC-CCEEEEECcCcccCCCCccccccHHHHHHHHhc-----c---------CCCHHHHHHHHH
Confidence 1 1 145555565554 5589999999998765 3666443321 0 467999999999
Q ss_pred HHHHhCC---CCCceEEEEEEccCCC
Q 028244 174 KIAYDAF---STDNISVVIVDLKAPR 196 (211)
Q Consensus 174 ~~A~~~~---~~DNiTvivv~~~~~~ 196 (211)
+.+...+ ..||+|++++++.+..
T Consensus 202 ~~~~~~~~~~~~DDiTvlvv~~~~~~ 227 (242)
T 3pu9_A 202 EAALVADDGRAGDDMTVVVLRLRNVE 227 (242)
T ss_dssp HHHHHHTTTSCSSCEEEEEEEEEECC
T ss_pred HHHHHhcCCCCCCCeEEEEEEEecCC
Confidence 9998755 6899999999997653
No 21
>3f79_A Probable two-component response regulator; adaptor, signaling protein; 2.80A {Pseudomonas aeruginosa} PDB: 3es2_A
Probab=99.64 E-value=2e-15 Score=123.10 Aligned_cols=136 Identities=18% Similarity=0.068 Sum_probs=93.5
Q ss_pred HHHHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEeccc-cceEEEeCCccccCCCCCCCCChHHHHHHHhhCC
Q 028244 23 LCRSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGD-SRVVLSRGKQAIPLTVDHKLDREDEVARITNGGD 99 (211)
Q Consensus 23 l~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGD-Sr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~lG~ 99 (211)
+..++..+|+.+... ...+++|++++++. .++++++|+|+ ++.|++++|++..++.+|.+ +|.
T Consensus 108 p~~~l~~ln~~l~~~---~~~~~~T~~~~~id~~~~~l~~~~aGh~p~~~l~~~g~~~~l~~~~~~-----------lG~ 173 (255)
T 3f79_A 108 PSEVLAHINRGLINT---KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-----------VGL 173 (255)
T ss_dssp HHHHHHHHHHHHBTT---BSSCCEEEEEEEEETTTTEEEEEECSCSCCCEEEC--CEEECCC----------------CC
T ss_pred HHHHHHHHHHHHHhc---CCCCEEEEEEEEEECCCCEEEEEeCCCCCceEEEeCCeEEEeCCCCce-----------EEE
Confidence 556788899999864 34689999999995 67999999999 56999999999999987766 665
Q ss_pred CCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHH-------HHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHH
Q 028244 100 HDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDD-------AVKLARYELRRRRRLPEKGDTPSSPACGAAEEL 172 (211)
Q Consensus 100 ~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~-------i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L 172 (211)
.. .. .++...+. .++++.|+||||||++.++.++ +.+++... ..++..+++.|
T Consensus 174 ~~---~~--~~~~~~~~-l~~gd~lll~TDGl~e~~~~~~~~~g~~~l~~~l~~~--------------~~~~~~~~~~l 233 (255)
T 3f79_A 174 FD---DA--TYDDRVME-LPPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------------GGTLDGLRQVF 233 (255)
T ss_dssp SS---CC--CCCC---B-CCSSEEEEEECSCCCCCSCC---CCTTTSSHHHHHHH--------------SCSSHHHHHHC
T ss_pred cC---CC--ceEEEEEE-ECCCCEEEEECCCcCcccCCCcchhhHHHHHHHHHhc--------------CCCHHHHHHHH
Confidence 31 11 33444443 4556689999999999998877 77777653 34678888888
Q ss_pred HHHHHhCCCCCceEEEEEEcc
Q 028244 173 VKIAYDAFSTDNISVVIVDLK 193 (211)
Q Consensus 173 ~~~A~~~~~~DNiTvivv~~~ 193 (211)
. .+...+..||+|+++++..
T Consensus 234 ~-~~~~~~~~DDiTvl~v~~~ 253 (255)
T 3f79_A 234 G-LANLAEMPDDIALLVLSRN 253 (255)
T ss_dssp ------CCSSSCEEEEEEEEC
T ss_pred H-hccCCCCCCCEEEEEEEec
Confidence 7 5677888999999999864
No 22
>3zt9_A Serine phosphatase; hydrolase, signal transduction, protein protein interaction,; HET: PEG; 1.75A {Moorella thermoacetica}
Probab=99.55 E-value=9e-14 Score=109.03 Aligned_cols=126 Identities=12% Similarity=0.085 Sum_probs=93.4
Q ss_pred HHHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEeccccceEEEeCCccccCCCCCCCCChHHHHHHHhhCCCC
Q 028244 24 CRSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDEVARITNGGDHD 101 (211)
Q Consensus 24 ~~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e~~ri~~lG~~~ 101 (211)
...+.++|+.+... .|+|++++.+. .+++.++|+|+++.|++|++....+...+.+ +|..
T Consensus 66 ~~il~~ln~~l~~~------~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~~~~~l~~~~g~-----------lG~~- 127 (193)
T 3zt9_A 66 VNIFQLCHRELRGT------RGAVAALCRVDRRQGLWQAAIVGNIHVKILSAKGIITPLATPGI-----------LGYN- 127 (193)
T ss_dssp HHHHHHHHHHHTTS------SCEEEEEEEEETTTTEEEEEEESSCEEEEEETTEEECCCCBCCB-----------BTTB-
T ss_pred HHHHHHHHHHHhcc------CceEEEEEEEECCCCEEEEEecCCceEEEEcCCcEEEecCCCCc-----------eecc-
Confidence 34566788887653 47888888887 5699999999999999999877666543221 4531
Q ss_pred CCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCC
Q 028244 102 LKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFS 181 (211)
Q Consensus 102 ~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~ 181 (211)
.. ..+....+++.+ ++.|+|+||||++.++.+++..++ ..+|+++|+.|++.+ ...
T Consensus 128 --~~--~~~~~~~~~l~~-gd~l~l~sDGl~e~~~~~~~~~~~-----------------~~~~~~~a~~l~~~~--~~~ 183 (193)
T 3zt9_A 128 --YP--HQLLIAKGSYQE-GDLFLIHSDGIQEGAVPLALLANY-----------------RLTAEELVRLIGEKY--GRR 183 (193)
T ss_dssp --CC--SSCCCEEEECCT-TCEEEEECTTSCTTCSCGGGGGCT-----------------TSCHHHHHHHHHHHH--CCT
T ss_pred --CC--ccceeEEeccCC-CCEEEEECCCCCCccChhhhhchh-----------------cCCHHHHHHHHHHHh--CcC
Confidence 11 134455555444 558999999999999998776543 347999999999998 458
Q ss_pred CCceEEEEEE
Q 028244 182 TDNISVVIVD 191 (211)
Q Consensus 182 ~DNiTvivv~ 191 (211)
.||+||+|++
T Consensus 184 ~Dd~tvlv~r 193 (193)
T 3zt9_A 184 DDDVAVIVAR 193 (193)
T ss_dssp TSCEEEEEEC
T ss_pred CCCeEEEEEC
Confidence 9999999985
No 23
>3ke6_A Protein RV1364C/MT1410; anti-sigma factor, anti-sigma factor antagonist, phosphatase serine kinase, ATPase, unknown function; 2.60A {Mycobacterium tuberculosis}
Probab=99.05 E-value=1.8e-08 Score=87.09 Aligned_cols=148 Identities=16% Similarity=0.136 Sum_probs=92.0
Q ss_pred HHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEeccccceEEEe-CCccccCCCCCCCCChHHHHHHHhhCCCC
Q 028244 25 RSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGDSRVVLSR-GKQAIPLTVDHKLDREDEVARITNGGDHD 101 (211)
Q Consensus 25 ~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGDSr~~l~~-~~~~~~lt~dH~~~~~~e~~ri~~lG~~~ 101 (211)
..+..+|+. ... ....+++|++++++. .+++.++++|..+.|+++ +|....+..++.+. +|..
T Consensus 102 ~il~~ln~~-~~~--~~~~~~~t~~~~~id~~~~~l~~~~aGh~~~~l~~~~g~~~~l~~~~~~p----------lG~~- 167 (399)
T 3ke6_A 102 EALEAVDRF-HKQ--VPGSKSATMCVGSLDFTSGEFQYCTAGHPPPLLVTADASARYVEPTGAGP----------LGSG- 167 (399)
T ss_dssp HHHHHHHHH-GGG--STTCTTCEEEEEEEETTTCEEEEEEESSCCCEEECTTSCEEECCCCSCCC----------TTSS-
T ss_pred HHHHHHHHH-HHh--cCCCcEEEEEEEEEECCCCEEEEECCCCChhEEEeCCCCEEEeecCCCcc----------eECC-
Confidence 455666773 333 234578999988886 569999999999999999 57777777665332 5641
Q ss_pred CCCccccCCcEEEEEecCCCeEEEEEcCCccccCCH------HHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHH
Q 028244 102 LKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSS------DDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKI 175 (211)
Q Consensus 102 ~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~------~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~ 175 (211)
.......+.+ ++++.|+|+||||++.... +.+.+++........ ......+...++.+++.+++.
T Consensus 168 ------~~~~~~~~~l-~~Gd~l~l~TDGl~e~~~~~~~~g~~~l~~~l~~~~~~~~--~~~~~~~~~~~~~l~~~~~~~ 238 (399)
T 3ke6_A 168 ------TGFPVRSEVL-NIGDAILFYTDGLIERPGRPLEASTAEFADLAASIASGSG--GFVLDAPARPIDRLCSDTLEL 238 (399)
T ss_dssp ------CCCCCEEEEC-CTTCEEEEECTTTTSCTTCCHHHHHHHHHHHHHHHTC------------CCHHHHHHHHHHHH
T ss_pred ------CCceeEEEEE-CCCCEEEEECCCcccCCCCCcchhHHHHHHHHHHhhcccc--cccccChhhHHHHHHHHHHHH
Confidence 1233444544 4555899999999998765 445555543211000 000000123345555655554
Q ss_pred HHh-CCCCCceEEEEEEccCC
Q 028244 176 AYD-AFSTDNISVVIVDLKAP 195 (211)
Q Consensus 176 A~~-~~~~DNiTvivv~~~~~ 195 (211)
... .+..||+||+++++...
T Consensus 239 ~~~~~~~~DDitvl~vr~~~~ 259 (399)
T 3ke6_A 239 LLRSTGYNDDVTLLAMQRRAP 259 (399)
T ss_dssp HHHTTCCSSCEEEEEEEECCC
T ss_pred hccCCCCCCceEEEEEEeeCC
Confidence 443 56799999999999764
No 24
>3eq2_A Probable two-component response regulator; adaptor sigmas, signaling protein; 3.40A {Pseudomonas aeruginosa} PDB: 3f7a_A
Probab=98.21 E-value=9.1e-06 Score=69.53 Aligned_cols=134 Identities=18% Similarity=0.057 Sum_probs=76.4
Q ss_pred HHHHHHHHHHhhcCCCCCCCCceeEEEEEe--CCeEEEEecccc-ceEEEeCCccccCCCCCCCCChHHHHHHHhhCCCC
Q 028244 25 RSYERADDVFKDNSLAPYSVGTTALVAILS--PCQIIASNCGDS-RVVLSRGKQAIPLTVDHKLDREDEVARITNGGDHD 101 (211)
Q Consensus 25 ~a~~~~~~~l~~~~~~~~~~GtT~~~~~i~--~~~~~~anvGDS-r~~l~~~~~~~~lt~dH~~~~~~e~~ri~~lG~~~ 101 (211)
..+..+|+.+... ......|++++++. .+++.++|.|-. -.++.++|.+..+.....| +|-..
T Consensus 249 ~~l~~ln~~l~~~---~~~~~~t~~~~~~d~~~~~l~~~~aGh~p~~~~~~~g~~~~l~~~~~p-----------lG~~~ 314 (394)
T 3eq2_A 249 EVLAHINRGLINT---KLGKHVTMLGGVIDLEKNSLTYSIGGHLPLPVLFVEGQAGYLEGRGLP-----------VGLFD 314 (394)
T ss_dssp HHHHHHHHHHHHT---TCCCCEEEEEEEEETTTTEEEEEECSSSCCCEEEETTEEEECCCC--C-----------CSCCC
T ss_pred HHHHHHHHHHhcc---CcCcEEEEEEEEEECCCCEEEEEcCCCCCCcEEecCCceEecCCCCce-----------eEecC
Confidence 4566778877753 23467888888886 469999999975 4777888888877654444 66431
Q ss_pred CCCccccCCcEEEEEecCCCeEEEEEcCCccccCCH-------HHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHH
Q 028244 102 LKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSS-------DDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVK 174 (211)
Q Consensus 102 ~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~-------~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~ 174 (211)
.. ......+.+ ++++.|+|.|||+.+.... +.+.+++... ...+..+++.+..
T Consensus 315 ---~~--~~~~~~~~l-~~gd~l~l~TDG~~e~~~~~~~~~~~~~l~~~l~~~--------------~~~~~~l~~~~~~ 374 (394)
T 3eq2_A 315 ---DA--TYDDRVMEL-PPSFSLSLFSDGILDVLPGATLKEKEASLPEQVAAA--------------GGTLDGLRQVFGL 374 (394)
T ss_dssp ---CC----CCEEEEC-CSSCEEEECSSCCCC-----CCSTTTTTSHHHHHTT--------------C--CHHHHHHHSC
T ss_pred ---CC--ceEEEEEEe-CCCCEEEEECCCcccccCcccchhhHHHHHHHHHhc--------------chhHHHHHHHhcc
Confidence 11 222334444 4555899999999997544 3344444421 2223333333321
Q ss_pred HHHhCCCCCceEEEEEEcc
Q 028244 175 IAYDAFSTDNISVVIVDLK 193 (211)
Q Consensus 175 ~A~~~~~~DNiTvivv~~~ 193 (211)
.......||+|+++++..
T Consensus 375 -~~~~~~~DDit~l~i~~~ 392 (394)
T 3eq2_A 375 -ANLAEMPDDIALLVLSRN 392 (394)
T ss_dssp -CCSCC--CCCEEEEEC--
T ss_pred -cCCCCCCCceEEEEEecc
Confidence 011235899999999865
No 25
>3q4f_C DNA repair protein XRCC4; DSB repair, nuclear, recombination-recombination complex, DN protein-protein binding complex; HET: DNA; 5.50A {Homo sapiens}
Probab=43.61 E-value=59 Score=24.38 Aligned_cols=70 Identities=21% Similarity=0.307 Sum_probs=45.4
Q ss_pred cccCCcEEEEEec---C--CCeEEEEEcCCc--cc-cCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHH
Q 028244 106 VIAEPEVTFMTRS---E--DDEFLILASDGL--WD-VMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAY 177 (211)
Q Consensus 106 v~~~p~i~~~~~~---~--~~~~lil~SDGl--~d-~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~ 177 (211)
+...|++.++-.. . ++.|.|+-|||- |. .+++++|.+++... .-....-.+.|.+.-.
T Consensus 39 ~~sep~~~yfLqvsW~~~lgsGF~i~LTDGqSaW~G~VS~~~Is~eAd~m--------------~Me~e~YV~eL~KALv 104 (186)
T 3q4f_C 39 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM--------------AMEKGKYVGELRKALL 104 (186)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT--------------TCCHHHHHHHHHHHHS
T ss_pred ecCCCCccEEEEEEeccCCCcceEEEEeCCcceeeeEECHHHHHHHHHHh--------------cCcHHHHHHHHHHHHh
Confidence 5668888776432 2 366999999995 43 69999999998864 4455666666655442
Q ss_pred -hCCCCCceEEEE
Q 028244 178 -DAFSTDNISVVI 189 (211)
Q Consensus 178 -~~~~~DNiTviv 189 (211)
..++.+|.+.-+
T Consensus 105 ~~~~~~~~y~F~~ 117 (186)
T 3q4f_C 105 SGAGPADVYTFNF 117 (186)
T ss_dssp SCCCSSCCEEEEE
T ss_pred cCCCCCcceEEEe
Confidence 333455555433
No 26
>1b9l_A Protein (epimerase); isomerase; 2.90A {Escherichia coli} SCOP: d.96.1.3
Probab=41.91 E-value=81 Score=21.54 Aligned_cols=58 Identities=17% Similarity=0.134 Sum_probs=41.7
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEcc
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLK 193 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~ 193 (211)
.||-+-+.++-.++.+.+.+.+.... -.-.+.+|+.+.+..+......-++|-|-+..
T Consensus 47 ~sDdl~~tvdY~~v~~~i~~~v~~~~---------~~LiE~lA~~Ia~~~l~~~~v~~v~V~v~Kp~ 104 (120)
T 1b9l_A 47 TSEDINDALNYRTVTKNIIQHVENNR---------FSLLEKLTQDVLDIAREHHWVTYAEVEIDKLH 104 (120)
T ss_dssp GGGTCSSCCCHHHHHHHHHHHHHTSE---------ESCHHHHHHHHHHHHTCSTTCSEEEEEEEEET
T ss_pred ccCCcccccCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHhccCCceEEEEEEECCC
Confidence 37889999999999999998877643 45578899999998876444444444444443
No 27
>3mud_A DNA repair protein XRCC4, tropomyosin alpha-1 CHA; tropomysoin, overlap complex, coiled-coils, contractIle PROT; HET: DNA; 2.20A {Homo sapiens} PDB: 3sr2_A*
Probab=40.15 E-value=77 Score=23.63 Aligned_cols=70 Identities=21% Similarity=0.290 Sum_probs=47.8
Q ss_pred cccCCcEEEEEec-----CCCeEEEEEcCCc--cc-cCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHH
Q 028244 106 VIAEPEVTFMTRS-----EDDEFLILASDGL--WD-VMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAY 177 (211)
Q Consensus 106 v~~~p~i~~~~~~-----~~~~~lil~SDGl--~d-~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~ 177 (211)
+...|++.++-.. -++.|.|+-|||- |- .+++.+|.+..... .-....-.+.|.+.-.
T Consensus 13 ~~s~p~~~yfL~v~w~~~l~~gf~i~ltDG~saW~g~Vs~~~i~~eA~~~--------------~me~e~Yv~el~kAl~ 78 (175)
T 3mud_A 13 LVSEPSITHFLQVSWEKTLESGFVITLTDGHSAWTGTVSESEISQEADDM--------------AMEKGKYVGELRKALL 78 (175)
T ss_dssp ETTEEEEEEEEEEEESSCGGGEEEEEEECSSCEEEEEEEHHHHHHHHHHT--------------TCCHHHHHHHHHHHHT
T ss_pred ecCCCCceEEEEEeccccCCcceEEEEeCCcceeeeeeCHHHHHHHHHHh--------------cCcHHHHHHHHHHHHh
Confidence 5568888776432 2356999999995 33 68999999998864 4556666666665543
Q ss_pred h-CCCCCceEEEE
Q 028244 178 D-AFSTDNISVVI 189 (211)
Q Consensus 178 ~-~~~~DNiTviv 189 (211)
. .++.+|.+.-+
T Consensus 79 ~~~~~~~~~~f~~ 91 (175)
T 3mud_A 79 SGAGPADVYTFNF 91 (175)
T ss_dssp TCCCTTCCEEEEE
T ss_pred cCCCCCcceEEec
Confidence 3 45677777655
No 28
>3v9o_A Dihydroneopterin aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: GUN; 1.45A {Burkholderia thailandensis}
Probab=39.70 E-value=1e+02 Score=21.96 Aligned_cols=57 Identities=11% Similarity=0.001 Sum_probs=41.8
Q ss_pred cCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEcc
Q 028244 128 SDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLK 193 (211)
Q Consensus 128 SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~ 193 (211)
||-+-+.++-.++.+.+.+.+.... ..-.+.+|+++.+..+.......++|-|-+..
T Consensus 66 sDdl~~tvdY~~v~~~I~~~v~~~~---------~~LlE~lAe~Ia~~il~~~~v~~v~V~V~Kp~ 122 (143)
T 3v9o_A 66 EDKLREVVDYDLMKQSVAQCVARGH---------IHLQETLCDAIAASLLAHDAVRAVRVSTEKPD 122 (143)
T ss_dssp SCCGGGSCCTHHHHHHHHHHHHTCC---------CCSHHHHHHHHHHHHHSSTTCCEEEEEEEETT
T ss_pred CccchhccCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHHhcCCccEEEEEEECCC
Confidence 5777788899999999998887643 45678899999999987644444444444443
No 29
>4aey_A D-erythro-7,8-dihydroneopterin triphosphate epime; isomerase, pteridine biosynthesis; 3.00A {Pseudomonas aeruginosa}
Probab=37.77 E-value=91 Score=22.66 Aligned_cols=59 Identities=7% Similarity=0.048 Sum_probs=38.1
Q ss_pred EEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEc
Q 028244 125 ILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDL 192 (211)
Q Consensus 125 il~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~ 192 (211)
--.||-+-+.++-.++.+.+...+.... ..-.+.+|+++.+..++......++|-|-+-
T Consensus 81 A~~sDdL~dTvdY~~v~~~I~~~v~~~~---------f~LIEtLAe~Ia~~ll~~~~v~~V~V~V~KP 139 (156)
T 4aey_A 81 AVEVNDIEHALNYRTITKAIIRHVEENR---------FALLERMTQEILDLVMENPAVRYAEVEVDKP 139 (156)
T ss_dssp --------CCCHHHHHHHHHHHHHHTSE---------ESCHHHHHHHHHHHHHHSCCCSEEEEEEEEE
T ss_pred ccccCcchhccCHHHHHHHHHHHHhcCC---------cccHHHHHHHHHHHHHhcCCccEEEEEEECC
Confidence 3568899999999999999988877543 4567889999999888766555555555553
No 30
>2o90_A DHNA, dihydroneopterin aldolase; monapterin, drug design, atomic resolution, X-RAY crystallography, lyase; HET: NEU; 1.07A {Escherichia coli} PDB: 2o9m_A*
Probab=35.24 E-value=1.1e+02 Score=20.99 Aligned_cols=56 Identities=18% Similarity=0.213 Sum_probs=40.9
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEE
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVD 191 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~ 191 (211)
.||-+-+.++-.++.+.+...+.... -.-.+.+|+.+.+..+......-++|-|-+
T Consensus 43 ~sDdl~~tvdY~~v~~~i~~~v~~~~---------~~LiE~lA~~Ia~~~l~~~~v~~v~V~v~K 98 (122)
T 2o90_A 43 KSDDVADCLSYADIAETVVSHVEGAR---------FALVERVAEEVAELLLARFNSPWVRIKLSK 98 (122)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTTCE---------ESCHHHHHHHHHHHHHHHSSCSCEEEEEEC
T ss_pred cccccccccCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHHhhCCceEEEEEEEC
Confidence 46888899999999999998776543 455788999999998876544444444433
No 31
>3o1k_A Dihydroneopterin aldolase FOLB, putative; structural genomics, center for structural genomics of infec diseases, csgid; 1.95A {Vibrio cholerae o1 biovar el tor}
Probab=32.77 E-value=1.2e+02 Score=21.25 Aligned_cols=56 Identities=14% Similarity=0.173 Sum_probs=41.4
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEE
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVD 191 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~ 191 (211)
.||-+-+.++-.++.+.+.+.+...+ ..-.+.+|+.+.+..+......-++|-|-+
T Consensus 58 ~sDdl~~tvdY~~v~~~I~~~v~~~~---------~~LiE~lA~~Ia~~ll~~~~v~~v~V~V~K 113 (132)
T 3o1k_A 58 KSDDVADALDYAQVSQAVLEHIEQGR---------FLLVERVAEEVAELIMTRFAVPWLRIRLTK 113 (132)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHTCE---------ESCHHHHHHHHHHHHHHHHCCSEEEEEEEE
T ss_pred cccccccccCHHHHHHHHHHHHhcCC---------cccHHHHHHHHHHHHHHhCCccEEEEEEEC
Confidence 47888889999999999998887643 456788899999988876544444444444
No 32
>1z9w_A DHNA, dihydroneopterin aldolase; FOLB, structural genomics, TB ST genomics; 2.50A {Mycobacterium tuberculosis H37RV} SCOP: d.96.1.3
Probab=31.78 E-value=1.2e+02 Score=21.12 Aligned_cols=56 Identities=16% Similarity=0.043 Sum_probs=40.4
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccC
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKA 194 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~ 194 (211)
.||-+-+.++-.++.+.+.+.+.... -.-.+.+|+.+.+..+. . ..+.-+-|++.+
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~---------~~LiE~lA~~Ia~~il~-~--~~v~~v~V~v~K 99 (133)
T 1z9w_A 44 NSDDLADTYDYVRLASRAAEIVAGPP---------RKLIETVGAEIADHVMD-D--QRVHAVEVAVHK 99 (133)
T ss_dssp GCSSHHHHSCHHHHHHHHHHHHHSSS---------CCCHHHHHHHHHHHHHH-S--TTEEEEEEEEEE
T ss_pred cccCchhccCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHhc-C--CCccEEEEEEEC
Confidence 37888889999999999998776543 45678899999999887 3 234444444443
No 33
>3r2e_A Dihydroneopterin aldolase; structural genomics, IDP90567, center for structural genomic infectious diseases, csgid, bifunctional; 2.15A {Yersinia pestis}
Probab=31.27 E-value=1.3e+02 Score=21.45 Aligned_cols=57 Identities=21% Similarity=0.250 Sum_probs=41.9
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCC
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAP 195 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~ 195 (211)
.||-+-+.++-.++.+.+.+.+...+ ..-.+.+|+++.+..+.... +.-+-|++.++
T Consensus 67 ~sDdl~~tvdY~~v~~~I~~~v~~~~---------f~LlE~LAe~Ia~~ll~~~~---v~~v~V~V~KP 123 (143)
T 3r2e_A 67 GSDDVNDCLSYADISEAVIQHVGSQR---------FALVERVAEEVAELLLRRFN---SPWVRIKVSKP 123 (143)
T ss_dssp TCCCTTSSCCHHHHHHHHHHHHHSSE---------ESCHHHHHHHHHHHHHHHHC---CSEEEEEEECT
T ss_pred cccccccccCHHHHHHHHHHHHhcCC---------cccHHHHHHHHHHHHHHhCC---ccEEEEEEECC
Confidence 36778889999999999998887543 45678889999998887554 44555555543
No 34
>3c4z_A Rhodopsin kinase; Ser/Thr kinase, RGS homology domain, G protein coupled recep kinase, GRK, GRK1, P-loop, autophosphoryl ADP, ATP-binding; HET: ADP; 1.84A {Bos taurus} PDB: 3c4x_A* 3c4y_A 3c4w_A* 3c50_A* 3c51_A* 3qc9_A* 2i94_B
Probab=30.45 E-value=22 Score=31.41 Aligned_cols=55 Identities=7% Similarity=-0.173 Sum_probs=42.3
Q ss_pred EEEcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEE----EEEc
Q 028244 125 ILASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVV----IVDL 192 (211)
Q Consensus 125 il~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvi----vv~~ 192 (211)
++++ |++++..++.+++.+.-... ..+....|+.|++.|+..++.||++.+ +.++
T Consensus 76 ~~t~---~~~~~~~~~~~~i~e~~~~~----------~~~~~~~~~~l~~~~~~~~~~d~~~~~~~~~v~~v 134 (543)
T 3c4z_A 76 LRTH---EQHGPALQLWKDIEDYDTAD----------DALRPQKAQALRAAYLEPQAQLFCSFLDAETVARA 134 (543)
T ss_dssp HHHC---GGGHHHHHHHHHHHHHHTSC----------TTTHHHHHHHHHHHHTSTTCTTCCTTSCHHHHHHH
T ss_pred HhcC---CchhHHHHHHhhhhhhccCc----------hhhHHHHHHHHHHHhhCchhhhhhccCCHHHHhhh
Confidence 4555 78888888888777642211 356888999999999999999999998 6666
No 35
>1dhn_A DHNA, 7,8-dihydroneopterin aldolase; pterin binding, folate biosynthesis, antibiotic target, beta; 1.65A {Staphylococcus aureus} SCOP: d.96.1.3 PDB: 1rri_A* 1rrw_A* 1rry_A* 1rs2_A* 1rs4_A* 1rsd_A* 1rsi_A* 1u68_A* 2dhn_A* 2nm2_A* 2nm3_A*
Probab=29.17 E-value=1.4e+02 Score=20.38 Aligned_cols=58 Identities=9% Similarity=0.116 Sum_probs=41.9
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCC
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAP 195 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~ 195 (211)
.||-+-+.++-.++.+.+.+.+.... -.-.+.+|+.+.+..+.... .+.-+-|++.++
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~---------~~LiE~lA~~Ia~~~l~~~~--~v~~v~V~v~Kp 101 (121)
T 1dhn_A 44 RTDNVIDTVHYGEVFEEVKSIMEGKA---------VNLLEHLAERIANRINSQYN--RVMETKVRITKE 101 (121)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSC---------CSCHHHHHHHHHHHHHHHCT--TEEEEEEEEEES
T ss_pred ccCCccceeCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHHHHCC--CceEEEEEEEcC
Confidence 37889999999999999998776543 45678899999999887532 244444454443
No 36
>1nbu_A DHNA, probable dihydroneopterin aldolase; anti-parallel, beta-sheet, two alpha helices, structural genomics, PSI; HET: PH2; 1.60A {Mycobacterium tuberculosis} SCOP: d.96.1.3 PDB: 1nbu_B* 1nbu_C*
Probab=25.94 E-value=1.6e+02 Score=20.00 Aligned_cols=58 Identities=17% Similarity=0.094 Sum_probs=43.5
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCC
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPR 196 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~ 196 (211)
.||-+-+.++-.++.+.+.+.+.... -.-.+.+|+++.+..+. . ..+.-+-|++.++.
T Consensus 44 ~sDdl~~tvdY~~v~~~i~~~v~~~~---------~~LiE~lA~~Ia~~~l~-~--~~v~~v~V~v~Kp~ 101 (119)
T 1nbu_A 44 NSDDLADTYDYVRLASRAAEIVAGPP---------RKLIETVGAEIADHVMD-D--QRVHAVEVAVHKPQ 101 (119)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHSSC---------CSCHHHHHHHHHHHHHT-S--TTCCEEEEEEECTT
T ss_pred ccccchhccCHHHHHHHHHHHHhcCC---------cccHHHHHHHHHHHHhc-C--CCccEEEEEEECCC
Confidence 47889999999999999998876643 45678899999999887 3 34555555665543
No 37
>1sql_A Dihydroneopterin aldolase; tetrahydrofolate biosynthesis, aldolase classes, retroaldol reaction, purin binding, schiff base, lyase; HET: GUN; 2.20A {Arabidopsis thaliana} SCOP: d.96.1.3
Probab=24.88 E-value=1.9e+02 Score=20.55 Aligned_cols=58 Identities=21% Similarity=0.195 Sum_probs=42.4
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCC-CCCceEEEEEEcc
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAF-STDNISVVIVDLK 193 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~-~~DNiTvivv~~~ 193 (211)
.||-+-+.++-.++.+.+.+.+.... -.-.+.+|+++.+..+... ...-++|-|-+..
T Consensus 63 ~sDdl~~tvdY~~v~~~I~~~v~~~~---------f~LiE~lA~~Ia~~il~~fp~v~~v~V~V~Kp~ 121 (146)
T 1sql_A 63 ESDNLEDTISYVDIFSLAKEIVEGSP---------RNLLETVAELIASKTLEKFHQINAVRVKLSKPN 121 (146)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSC---------CSCHHHHHHHHHHHHHHHCTTCCEEEEEEEESS
T ss_pred cccCchhccCHHHHHHHHHHHHHcCC---------cchHHHHHHHHHHHHHHHCCCceEEEEEEECCc
Confidence 37889999999999999998776543 4557889999999988753 4444555444443
No 38
>1hq0_A CNF1, cytotoxic necrotizing factor 1; beta sandwich, RHO deamidase, RHO transglutaminase, toxin; 1.83A {Escherichia coli} SCOP: d.194.1.1 PDB: 1hzg_A
Probab=23.24 E-value=66 Score=26.00 Aligned_cols=25 Identities=24% Similarity=0.217 Sum_probs=20.3
Q ss_pred CCCCCceeEEEEEeCCeEEEEecccc
Q 028244 41 PYSVGTTALVAILSPCQIIASNCGDS 66 (211)
Q Consensus 41 ~~~~GtT~~~~~i~~~~~~~anvGDS 66 (211)
+.-+|||.+.+ +.++.+|..|+|-+
T Consensus 142 G~LSGCT~v~A-~K~~~ly~~HtGk~ 166 (295)
T 1hq0_A 142 GNLSGCTTIVA-RKEGYIYKVHTGTT 166 (295)
T ss_dssp CCBSSCEEEEE-EETTEEEEEEEEES
T ss_pred CcccCcEEEEE-EcCCeEEEEEcCCC
Confidence 45678887766 68999999999976
Done!