Query 028244
Match_columns 211
No_of_seqs 144 out of 1147
Neff 8.5
Searched_HMMs 13730
Date Mon Mar 25 13:47:44 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028244.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028244hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1a6qa2 d.219.1.1 (A:2-296) Pr 100.0 2E-38 1.5E-42 263.7 19.9 171 14-195 91-293 (295)
2 d1txoa_ d.219.1.1 (A:) putativ 100.0 1E-33 7.6E-38 227.4 12.5 173 3-194 49-235 (235)
3 d1nbua_ d.96.1.3 (A:) 7,8-dihy 57.6 20 0.0015 22.9 7.5 57 127-192 43-99 (118)
4 d1b9la_ d.96.1.3 (A:) 7,8-dihy 25.3 75 0.0055 19.9 6.5 56 127-191 46-101 (119)
5 d1hq0a_ d.194.1.1 (A:) Type 1 24.6 32 0.0023 26.0 3.7 26 40-66 141-166 (295)
6 d1sqla_ d.96.1.3 (A:) 7,8-dihy 20.2 98 0.0071 19.3 7.1 58 127-193 43-101 (120)
7 d1dgna_ a.77.1.3 (A:) Iceberg 17.6 65 0.0048 19.0 3.6 32 134-180 33-64 (89)
8 d2elca1 a.46.2.1 (A:1-52) Anth 16.2 82 0.006 16.7 4.3 37 133-180 11-47 (52)
9 d1dhna_ d.96.1.3 (A:) 7,8-dihy 15.8 1.3E+02 0.0092 18.7 7.2 59 127-196 44-102 (121)
10 d1khda1 a.46.2.1 (A:12-80) Ant 14.1 1.1E+02 0.0077 17.0 3.8 35 134-179 14-48 (69)
No 1
>d1a6qa2 d.219.1.1 (A:2-296) Protein serine/threonine phosphatase 2C, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=100.00 E-value=2e-38 Score=263.67 Aligned_cols=171 Identities=33% Similarity=0.457 Sum_probs=153.5
Q ss_pred chHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccCCCCCCCCChHH
Q 028244 14 GWHRRWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPLTVDHKLDREDE 90 (211)
Q Consensus 14 ~~~~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~lt~dH~~~~~~e 90 (211)
...+++.++|.++|.++|+.+.... .....+|||++++++.++++|++|+||||+|+++++.+++||.||++.++.|
T Consensus 91 ~~~~~~~~al~~a~~~~~~~~~~~~~~~~~~~~~GtTa~~~~i~~~~l~vanvGDSR~~l~~~~~~~~lT~dH~~~~~~E 170 (295)
T d1a6qa2 91 PSVENVKNGIRTGFLEIDEHMRVMSEKKHGADRSGSTAVGVLISPQHTYFINCGDSRGLLCRNRKVHFFTQDHKPSNPLE 170 (295)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCCEECEEEEEECSSEEEEEEESSCEEEEEETTEEEEECCCCCTTSHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHhhhhhhccCcCCCCCeEEEEEeeCCEEEEEecCCCeEEEeecccceeeccccCcccHHH
Confidence 4567899999999999999887543 5667899999999999999999999999999999999999999999999999
Q ss_pred HHHHHh-------------------hCCCCCC---------CccccCCcEEEEEec-CCCeEEEEEcCCccccCCHHHHH
Q 028244 91 VARITN-------------------GGDHDLK---------PWVIAEPEVTFMTRS-EDDEFLILASDGLWDVMSSDDAV 141 (211)
Q Consensus 91 ~~ri~~-------------------lG~~~~~---------~~v~~~p~i~~~~~~-~~~~~lil~SDGl~d~l~~~~i~ 141 (211)
+.|+.. +||+.+| +.+++.|++..+.+. ++++|||||||||||+|+++++.
T Consensus 171 ~~Ri~~~gg~v~~~r~~g~l~~tRa~Gd~~~k~~~~~~~~~~~v~~~Pdi~~~~~~~~~~~flvL~SDGl~d~l~~~ei~ 250 (295)
T d1a6qa2 171 KERIQNAGGSVMIQRVNGSLAVSRALGDFDYKCVHGKGPTEQLVSPEPEVHDIERSEEDDQFIILACDGIWDVMGNEELC 250 (295)
T ss_dssp HHHHHHTTCCEETTEETTTBSCSBCEECGGGSCCTTCCGGGSSSBCCCEEEEEECCTTTEEEEEEECHHHHTTSCHHHHH
T ss_pred HhhHhhcCCcccccccCCceeeeeccCcHHhhhccccCcccccccccccceEEEeecccceeEeeecCcccccCCHHHHH
Confidence 999976 7777666 359999999998875 56779999999999999999999
Q ss_pred HHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCC
Q 028244 142 KLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAP 195 (211)
Q Consensus 142 ~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~ 195 (211)
++++..+.. ..+++.+|+.|++.|+.+++.||+|||||+|.+.
T Consensus 251 ~~v~~~~~~-----------~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~~~~~ 293 (295)
T d1a6qa2 251 DFVRSRLEV-----------TDDLEKVCNEVVDTCLYKGSRDNMSVILICFPNA 293 (295)
T ss_dssp HHHHHHHTT-----------CCCHHHHHHHHHHHHHHTTCCSCEEEEEEECTTS
T ss_pred HHHHHHhhc-----------CCCHHHHHHHHHHHHHhcCCCCCeEEEEEeccCC
Confidence 999887655 5689999999999999999999999999999864
No 2
>d1txoa_ d.219.1.1 (A:) putative serine/threonine phosphatase pstp/ppp {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=100.00 E-value=1e-33 Score=227.42 Aligned_cols=173 Identities=20% Similarity=0.170 Sum_probs=134.4
Q ss_pred HHHhhhhhCCCchHHHHHHHHHHHHHHHHHHHhhcC---CCCCCCCceeEEEEEeCCeEEEEeccccceEEEeCCccccC
Q 028244 3 AEEWGREAGNDGWHRRWEAALCRSYERADDVFKDNS---LAPYSVGTTALVAILSPCQIIASNCGDSRVVLSRGKQAIPL 79 (211)
Q Consensus 3 ~~~l~~~~~~~~~~~~~~~~l~~a~~~~~~~l~~~~---~~~~~~GtT~~~~~i~~~~~~~anvGDSr~~l~~~~~~~~l 79 (211)
.+.|.+.+.. ....++...|+++|+++|+.+.... .....+|||++++++.++++|++|+||||+|++|+|++.++
T Consensus 49 ~~~l~~~~~~-~~~~~~~~~l~~~~~~~~~~l~~~~~~~~~~~~~gtt~~~~~~~~~~l~~anvGDSr~~l~r~g~~~~l 127 (235)
T d1txoa_ 49 IAALAHLDDD-EPGGDLLAKLDAAVRAGNSAIAAQVEMEPDLEGMGTTLTAILFAGNRLGLVHIGDSRGYLLRDGELTQI 127 (235)
T ss_dssp HHHHGGGGSS-CCCSCHHHHHHHHHHHHHHHHHHHHHHCGGGTTCEECEEEEEEETTEEEEEEESSCEEEEEETTEEEEC
T ss_pred HHHHHHHhhc-cCcccHHHHHHHHHHHHHHHHHHHhhcccccccceeeeeeeeeccceeEEEecCCccEEEecCCEEEEe
Confidence 3444444422 2234566778999999999998764 45567899999999999999999999999999999999999
Q ss_pred CCCCCCCChHHHHHHHh-----------hCCCCCCCccccCCcEEEEEecCCCeEEEEEcCCccccCCHHHHHHHHHHHH
Q 028244 80 TVDHKLDREDEVARITN-----------GGDHDLKPWVIAEPEVTFMTRSEDDEFLILASDGLWDVMSSDDAVKLARYEL 148 (211)
Q Consensus 80 t~dH~~~~~~e~~ri~~-----------lG~~~~~~~v~~~p~i~~~~~~~~~~~lil~SDGl~d~l~~~~i~~ii~~~~ 148 (211)
|.||++....+..+... +....+ ......|++..+++.++| +||||||||||+++++++.+++.
T Consensus 128 t~dH~~~~~~~~~g~~~~~~~~~~~~~~~lt~~~-g~~~~~pdi~~~~l~~~D-~llL~SDGl~d~l~~~ei~~i~~--- 202 (235)
T d1txoa_ 128 TKDDTFVQTLVDEGRITPEEAHSHPQRSLIMRAL-TGHEVEPTLTMREARAGD-RYLLCSDGLSDPVSDETILEALQ--- 202 (235)
T ss_dssp SCCCBHHHHHHHTTSSCTTGGGGCTTTTCBCCCB-SSSCCCCEEEEEECCTTC-EEEEECHHHHTTSCHHHHHHHHT---
T ss_pred cCCCcHHHHhhhhcccchhhhhhccccchhhccc-ccccccceEEEEecCCCC-EEEEcCcchhcCCCHHHHHHHHh---
Confidence 99998853322211100 000000 124457999998777655 78999999999999999999986
Q ss_pred HhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccC
Q 028244 149 RRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKA 194 (211)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~ 194 (211)
..+++++|+.|++.|+++++.||+|||||++++
T Consensus 203 -------------~~~~~~~a~~Lv~~A~~~gs~DNiTvivv~l~~ 235 (235)
T d1txoa_ 203 -------------IPEVAESAHRLIELALRGGGPDNVTVVVADLEH 235 (235)
T ss_dssp -------------SSSHHHHHHHHHHHHHHTTCCSCEEEEEEEEEC
T ss_pred -------------CCCHHHHHHHHHHHHHhcCCCCCEEEEEEEEeC
Confidence 568999999999999999999999999999864
No 3
>d1nbua_ d.96.1.3 (A:) 7,8-dihydroneopterin aldolase {Bacteria (Mycobacterium tuberculosis) [TaxId: 1773]}
Probab=57.60 E-value=20 Score=22.92 Aligned_cols=57 Identities=14% Similarity=0.028 Sum_probs=42.3
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEc
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDL 192 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~ 192 (211)
.+|.+-+.++-..+.+.+...+.... ..-.+.+|..+++..++....+-++|-+-+.
T Consensus 43 ~~D~l~~tvdY~~l~~~i~~~~~~~~---------~~LlE~la~~I~~~i~~~~~v~~v~v~i~K~ 99 (118)
T d1nbua_ 43 NSDDLADTYDYVRLASRAAEIVAGPP---------RKLIETVGAEIADHVMDDQRVHAVEVAVHKP 99 (118)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHHSSC---------CSCHHHHHHHHHHHHHTSTTCCEEEEEEECT
T ss_pred cccccccCccHHHHHHHHHHHHhcCc---------hhhHHHHHHHHHHHHhccCCceEEEEEEECC
Confidence 57889999999999999988776543 4457889999999998876555555444443
No 4
>d1b9la_ d.96.1.3 (A:) 7,8-dihydroneopterin triphosphate epimerase {Escherichia coli [TaxId: 562]}
Probab=25.27 E-value=75 Score=19.87 Aligned_cols=56 Identities=16% Similarity=0.111 Sum_probs=40.8
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEE
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVD 191 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~ 191 (211)
.+|-+-+.++-..+.+.+...+.... -.-.+.+|+.+.+..+.....+-+++-+-+
T Consensus 46 ~~D~l~~tvdY~~i~~~i~~~~~~~~---------~~liE~la~~i~~~i~~~~~v~~v~v~i~K 101 (119)
T d1b9la_ 46 TSEDINDALNYRTVTKNIIQHVENNR---------FSLLEKLTQDVLDIAREHHWVTYAEVEIDK 101 (119)
T ss_dssp GGGTCSSCCCHHHHHHHHHHHHHTSE---------ESCHHHHHHHHHHHHTCSTTCSEEEEEEEE
T ss_pred cccchhhhhhHHHHHHHHHHHHhcCc---------cchHHHHHHHHHHHHHhcCCCcEEEEEEEC
Confidence 46888888999999988887776543 345788999999998876655544444433
No 5
>d1hq0a_ d.194.1.1 (A:) Type 1 cytotoxic necrotizing factor, catalytic domain {Escherichia coli [TaxId: 562]}
Probab=24.57 E-value=32 Score=25.99 Aligned_cols=26 Identities=23% Similarity=0.222 Sum_probs=20.3
Q ss_pred CCCCCCceeEEEEEeCCeEEEEecccc
Q 028244 40 APYSVGTTALVAILSPCQIIASNCGDS 66 (211)
Q Consensus 40 ~~~~~GtT~~~~~i~~~~~~~anvGDS 66 (211)
.+.-+|||.+.+ +.++.+|..|+|-+
T Consensus 141 sG~LSGCT~v~A-~K~~~ly~~HtGts 166 (295)
T d1hq0a_ 141 SGNLSGCTTIVA-RKEGYIYKVHTGTT 166 (295)
T ss_dssp CCCBSSCEEEEE-EETTEEEEEEEEES
T ss_pred CCcccCcEEEEE-EcCCeEEEEEccCC
Confidence 345688887766 68999999999943
No 6
>d1sqla_ d.96.1.3 (A:) 7,8-dihydroneopterin aldolase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}
Probab=20.22 E-value=98 Score=19.32 Aligned_cols=58 Identities=19% Similarity=0.154 Sum_probs=42.9
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhC-CCCCceEEEEEEcc
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDA-FSTDNISVVIVDLK 193 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~-~~~DNiTvivv~~~ 193 (211)
.+|-+-+.++-.++.+.+...+.... -.-.+.+|+.+++..+.. +.-+-++|-+-+..
T Consensus 43 ~~D~l~~tidY~~l~~~i~~~~~~~~---------~~LiE~la~~i~~~il~~~~~i~~v~v~I~Kp~ 101 (120)
T d1sqla_ 43 ESDNLEDTISYVDIFSLAKEIVEGSP---------RNLLETVAELIASKTLEKFHQINAVRVKLSKPN 101 (120)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSC---------CSCHHHHHHHHHHHHHHHCTTCCEEEEEEEESS
T ss_pred cccccccccCHHHHHHHHHHHHhcCC---------cchHHHHHHHHHHHHHHhCCCccEEEEEEECCC
Confidence 46888899999999999988776533 345788999999998865 34455666555543
No 7
>d1dgna_ a.77.1.3 (A:) Iceberg {Human (Homo sapiens) [TaxId: 9606]}
Probab=17.57 E-value=65 Score=19.04 Aligned_cols=32 Identities=19% Similarity=0.196 Sum_probs=22.9
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCC
Q 028244 134 VMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAF 180 (211)
Q Consensus 134 ~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~ 180 (211)
+++.++...|... .....+.++.|++....+|
T Consensus 33 Vlt~~e~e~I~~~---------------~~t~~~k~r~LLd~l~~kG 64 (89)
T d1dgna_ 33 VISQEDMNKVRDE---------------NDTVMDKARVLIDLVTGKG 64 (89)
T ss_dssp CSCHHHHHHHHTC---------------CSSHHHHHHHHHHHHHHTC
T ss_pred CCCHHHHHHHHhc---------------CCCHHHHHHHHHHHHHhcC
Confidence 5777777777652 3457788889998877665
No 8
>d2elca1 a.46.2.1 (A:1-52) Anthranilate phosphoribosyltransferase (TrpD) {Thermus thermophilus [TaxId: 274]}
Probab=16.19 E-value=82 Score=16.70 Aligned_cols=37 Identities=19% Similarity=0.241 Sum_probs=29.0
Q ss_pred ccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCC
Q 028244 133 DVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAF 180 (211)
Q Consensus 133 d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~ 180 (211)
..++.++...++...++. ..++..++..|+....+.-
T Consensus 11 ~~Lt~~ea~~~~~~im~G-----------~~~~~qiaafL~al~~KGe 47 (52)
T d2elca1 11 EVLEEEEAYEVMRALMAG-----------EVSPVRAAGLLVALSLRGE 47 (52)
T ss_dssp CCCCHHHHHHHHHHHHTT-----------CSCHHHHHHHHHHHHHHCC
T ss_pred CCCCHHHHHHHHHHHHcC-----------CCCHHHHHHHHHHHHHcCC
Confidence 358899999999988876 5678888888888776543
No 9
>d1dhna_ d.96.1.3 (A:) 7,8-dihydroneopterin aldolase {Staphylococcus aureus [TaxId: 1280]}
Probab=15.82 E-value=1.3e+02 Score=18.69 Aligned_cols=59 Identities=8% Similarity=0.084 Sum_probs=42.3
Q ss_pred EcCCccccCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhCCCCCceEEEEEEccCCC
Q 028244 127 ASDGLWDVMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDAFSTDNISVVIVDLKAPR 196 (211)
Q Consensus 127 ~SDGl~d~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~~~~DNiTvivv~~~~~~ 196 (211)
.+|-+-+.++-..+.+.+...+.... -.-.+.+|..+++..+.. .+.++-+-+++.++.
T Consensus 44 ~~D~l~~tidY~~~~~~i~~~~~~~~---------~~llE~la~~i~~~i~~~--~~~v~~v~v~i~Kp~ 102 (121)
T d1dhna_ 44 RTDNVIDTVHYGEVFEEVKSIMEGKA---------VNLLEHLAERIANRINSQ--YNRVMETKVRITKEN 102 (121)
T ss_dssp HHCCGGGSCCHHHHHHHHHHHHTSSC---------CSCHHHHHHHHHHHHHHH--CTTEEEEEEEEEESS
T ss_pred cccccccchhHHHHHHHHHHHHhhcc---------hhhHHHHHHHHHHHHHHh--CCCccEEEEEEEeCC
Confidence 57888899999999999988776432 345788899999988764 234555555555543
No 10
>d1khda1 a.46.2.1 (A:12-80) Anthranilate phosphoribosyltransferase (TrpD) {Pectobacterium carotovorum [TaxId: 554]}
Probab=14.07 E-value=1.1e+02 Score=17.03 Aligned_cols=35 Identities=14% Similarity=0.189 Sum_probs=23.8
Q ss_pred cCCHHHHHHHHHHHHHhccCCCCCCCCCCCcHHHHHHHHHHHHHhC
Q 028244 134 VMSSDDAVKLARYELRRRRRLPEKGDTPSSPACGAAEELVKIAYDA 179 (211)
Q Consensus 134 ~l~~~~i~~ii~~~~~~~~~~~~~~~~~~~~~~~~a~~L~~~A~~~ 179 (211)
.|+.+++..++...+.. ..+...++.-|+....++
T Consensus 14 ~Ls~ee~~~~~~~i~~g-----------~~~d~qiaafL~al~~kg 48 (69)
T d1khda1 14 SMTQEESHQLFAAIVRG-----------ELEDSQLAAALISMKMRG 48 (69)
T ss_dssp CCCHHHHHHHHHHHTTT-----------CSCHHHHHHHHHHHHHHC
T ss_pred CCCHHHHHHHHHHHHcC-----------CCCHHHHHHHHHHHHHhC
Confidence 47788888888877654 456667777776666554
Done!