BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028247
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9FMW4|GEML8_ARATH Putative GEM-like protein 8 OS=Arabidopsis thaliana GN=At5g23370
PE=3 SV=1
Length = 219
Score = 205 bits (522), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 129/172 (75%)
Query: 37 TEMGQRKCIESKGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGL 96
T G+ + K +F +RD K+GPK +ETVK KLSLGA+I+Q GG E I+K++F +
Sbjct: 45 TGKGKSMLRKKKNDSFTNGVRDQDKLGPKLTETVKRKLSLGARILQMGGLEKIYKRLFKV 104
Query: 97 TEGEEFLKASQCYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPI 156
++ E+ KA QCYLSTT GPIAGLLFIS+KKIAFCSERSI +S GEL R YKV IP+
Sbjct: 105 SDEEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGELNRVHYKVSIPL 164
Query: 157 QKIKSINESENVNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAISMA 208
KI +N+S+N KP QKY+E+VTVD F+FWFMGFL Y+KA+ L++A+S++
Sbjct: 165 CKINGVNQSQNTTKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCLEQALSLS 216
>sp|Q9FTA0|GEML4_ARATH GEM-like protein 4 OS=Arabidopsis thaliana GN=At5g08350 PE=2 SV=1
Length = 222
Score = 205 bits (521), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/189 (53%), Positives = 132/189 (69%), Gaps = 2/189 (1%)
Query: 24 TMTHLTVNADEEDTEMGQRKCI--ESKGSNFACRIRDHVKMGPKFSETVKSKLSLGAKII 81
+ V A + +E K I K F +RD K+ PK +ETVK KLSLGA+I+
Sbjct: 29 SFNKFRVPASSKKSEQSNVKSILKRKKTDGFTNGVRDQSKIRPKLTETVKRKLSLGARIL 88
Query: 82 QKGGRENIFKQIFGLTEGEEFLKASQCYLSTTRGPIAGLLFISNKKIAFCSERSISYSSS 141
Q GG E IFK++F ++EGE+ K QCYLSTT GPIAGLLFIS+KK+AFCSERSI S
Sbjct: 89 QVGGLEKIFKRLFRVSEGEKLFKMYQCYLSTTAGPIAGLLFISSKKMAFCSERSIKVDSP 148
Query: 142 TGELIRTPYKVLIPIQKIKSINESENVNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNL 201
G++IR YKV IP+ KI +N+S+N KP QKY+E+VTVD F+FWFMGFL Y+KA+ L
Sbjct: 149 QGDIIRVHYKVSIPLCKIDRVNQSQNTKKPSQKYLEVVTVDGFDFWFMGFLSYQKAFNCL 208
Query: 202 QKAISMANE 210
+KA+S++ E
Sbjct: 209 EKALSLSFE 217
>sp|Q9FMW6|GEML6_ARATH GEM-like protein 6 OS=Arabidopsis thaliana GN=At5g23350 PE=2 SV=2
Length = 218
Score = 199 bits (507), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 125/170 (73%)
Query: 37 TEMGQRKCIESKGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGL 96
T G+ + K +F RD K+GPK +ETVK KLSLGAKI+Q GG E I+K++F +
Sbjct: 45 TGKGKSMLRKKKTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKV 104
Query: 97 TEGEEFLKASQCYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPI 156
+ E+ KA QCYLSTT GPIAGLLFIS+KKIAFCSERSI +S G L R YKV IP+
Sbjct: 105 CDQEKLFKAYQCYLSTTAGPIAGLLFISSKKIAFCSERSIKVASPQGVLSRVHYKVSIPL 164
Query: 157 QKIKSINESENVNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAIS 206
KI +N+S+N KP QKY+EIVT+D+F+FWFMGF+ Y+KA+ L+KA++
Sbjct: 165 CKINGVNQSQNTKKPSQKYLEIVTIDNFDFWFMGFVSYQKAFNCLEKALN 214
>sp|Q9FMW5|GEML7_ARATH GEM-like protein 7 OS=Arabidopsis thaliana GN=At5g23360 PE=2 SV=1
Length = 210
Score = 196 bits (498), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 92/159 (57%), Positives = 121/159 (76%)
Query: 48 KGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQ 107
K +F RD K+GPK +ETVK KLSLGAKI+Q GG E I+K++F + + E+ KA Q
Sbjct: 48 KTDSFTNGARDQDKLGPKLTETVKRKLSLGAKILQMGGLEKIYKRLFKVCDKEKLFKAYQ 107
Query: 108 CYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPIQKIKSINESEN 167
CYLSTT G IAGLLFIS+KKIAFCSERSI +S G+L R YKV IP+ KI +N+S+N
Sbjct: 108 CYLSTTEGSIAGLLFISSKKIAFCSERSIKVTSPQGDLTRVHYKVSIPLCKINGVNQSQN 167
Query: 168 VNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAIS 206
KP Q+Y+E+VTVD+++FWFMGF+ Y+KA+ L+KA++
Sbjct: 168 TKKPSQRYLEVVTVDNYDFWFMGFVSYQKAFNCLEKALN 206
>sp|Q9LYV6|GEML5_ARATH GEM-like protein 5 OS=Arabidopsis thaliana GN=At5g13200 PE=1 SV=1
Length = 272
Score = 147 bits (371), Expect = 5e-35, Method: Compositional matrix adjust.
Identities = 69/180 (38%), Positives = 108/180 (60%), Gaps = 1/180 (0%)
Query: 27 HLTVNADEEDTEMGQRKCIESKGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGR 86
H T N E +G K A + ++K GP SET K++L AK I KGG
Sbjct: 83 HPTTNNPLEPV-IGMFHTWSRKAETVARNLWHNLKTGPSMSETAWGKVNLTAKAITKGGF 141
Query: 87 ENIFKQIFGLTEGEEFLKASQCYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELI 146
E++F+QIFG E K CYLSTT GP+AG +++SN ++AFCS+R + +++ +G+
Sbjct: 142 ESLFRQIFGTEPNETLKKTFACYLSTTTGPVAGTVYLSNARVAFCSDRPLYFTAPSGQES 201
Query: 147 RTPYKVLIPIQKIKSINESENVNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAIS 206
+ Y+V++P+ + ++N P +KY+++ TVD +FWFMGF+ YEKA +L ++S
Sbjct: 202 WSYYRVVVPLANVATVNPVVVKETPPEKYIQLTTVDGHDFWFMGFVNYEKATHHLLTSVS 261
>sp|Q9M122|GEML2_ARATH GEM-like protein 2 OS=Arabidopsis thaliana GN=At4g01600 PE=2 SV=1
Length = 233
Score = 145 bits (365), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 68/151 (45%), Positives = 103/151 (68%), Gaps = 1/151 (0%)
Query: 56 IRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQCYLSTTRG 115
++DH+K P S+ ++LS G K+I +GG E +F++ FG+ E+ L + CY+STT G
Sbjct: 74 LKDHLKFSPSISDAAMARLSQGTKMIVEGGPERVFQREFGVLAVEKLLDSFVCYISTTSG 133
Query: 116 PIAGLLFISNKKIAFCSERSISY-SSSTGELIRTPYKVLIPIQKIKSINESENVNKPEQK 174
P+ G+++ISN++IAFCS+ +I SS+ G + YKV++ +KI SI+ S NV KP ++
Sbjct: 134 PVTGVIYISNRRIAFCSDYAIRLPSSAGGNGVAAYYKVVMEWEKISSISSSTNVLKPSER 193
Query: 175 YVEIVTVDDFEFWFMGFLRYEKAYRNLQKAI 205
YV +VT D FEFWFMGF+ Y A+ L KA+
Sbjct: 194 YVHMVTRDGFEFWFMGFVSYIDAFNCLNKAL 224
>sp|Q9SE96|GEML1_ARATH GEM-like protein 1 OS=Arabidopsis thaliana GN=FIP1 PE=1 SV=1
Length = 259
Score = 135 bits (341), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 58/158 (36%), Positives = 100/158 (63%), Gaps = 1/158 (0%)
Query: 48 KGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQ 107
K + A H+K GP ++ S+++ G KI+ +GG E +FKQ F E+ LK
Sbjct: 98 KAEDLAGNFWQHLKTGPSVADAAVSRIAQGTKILAEGGYEKVFKQTFDCLPDEKLLKTYA 157
Query: 108 CYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPIQKIKSINESEN 167
CYLST+ GP+ G++++S K+AF S+ +SY + + + YKV++P ++K++N S +
Sbjct: 158 CYLSTSAGPVLGVMYLSTHKLAFSSDNPLSYKEGE-QTLWSYYKVVLPANQLKAVNPSTS 216
Query: 168 VNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAI 205
KY++++++D+ EFWFMGF+ YE A ++LQ+A+
Sbjct: 217 RVNTSDKYIQVISIDNHEFWFMGFVTYESAVKSLQEAV 254
>sp|Q8S8F8|GEM_ARATH GLABRA2 expression modulator OS=Arabidopsis thaliana GN=GEM PE=1
SV=1
Length = 299
Score = 135 bits (340), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 101/158 (63%), Gaps = 1/158 (0%)
Query: 48 KGSNFACRIRDHVKMGPKFSETVKSKLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQ 107
K + A H++ P F++ +++ K+ +GG E IF+Q F E+ L +
Sbjct: 135 KTESLAGNTWQHLRTAPSFADAAMGRIAQSTKVFAEGGYEKIFRQTFETDPEEQLLNSFA 194
Query: 108 CYLSTTRGPIAGLLFISNKKIAFCSERSISYSSSTGELIRTPYKVLIPIQKIKSINESEN 167
CYLST+ GP+ G+L+IS+ K+A+CS+ +SY + + + YKV+IP+ ++K++N S +
Sbjct: 195 CYLSTSAGPVMGVLYISSAKLAYCSDNPLSYKNGD-QTEWSYYKVVIPLHQLKAVNPSAS 253
Query: 168 VNKPEQKYVEIVTVDDFEFWFMGFLRYEKAYRNLQKAI 205
+ P +KY+++++VD+ EFWFMGFL Y+ A +LQ ++
Sbjct: 254 IVNPAEKYIQVISVDNHEFWFMGFLNYDGAVTSLQDSL 291
>sp|Q9M063|GEML3_ARATH Putative GEM-like protein 3 OS=Arabidopsis thaliana GN=At4g40100
PE=3 SV=2
Length = 239
Score = 115 bits (287), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 82/133 (61%), Gaps = 15/133 (11%)
Query: 73 KLSLGAKIIQKGGRENIFKQIFGLTEGEEFLKASQCYLSTTRGPIAGLLFISNKKIAFCS 132
+++ K++ +GG E IF+Q F E+ + CYLST+ GP+ G+L++S K+A+CS
Sbjct: 113 RIAQSTKVLAEGGYEKIFRQTFETVPEEQLQNSFACYLSTSAGPVMGVLYVSTAKLAYCS 172
Query: 133 ERSISYSSSTGELIRTPYKVLIPIQKIKSINESENVNKPEQKYVEIVTVDDFEFWFMGFL 192
+ S+ V+IP+ ++KS+N S + P +KY+++++VDD EFWFMGFL
Sbjct: 173 DTSL---------------VVIPLHQLKSVNPSISTVNPAEKYIQVISVDDHEFWFMGFL 217
Query: 193 RYEKAYRNLQKAI 205
YE A +LQ +
Sbjct: 218 NYEGAVTSLQDTL 230
>sp|Q9FGS8|C2GR2_ARATH C2 and GRAM domain-containing protein At5g50170 OS=Arabidopsis
thaliana GN=At5g50170 PE=2 SV=1
Length = 1027
Score = 37.7 bits (86), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 26/71 (36%), Positives = 40/71 (56%), Gaps = 7/71 (9%)
Query: 68 ETVKSKLS-----LGAKI-IQKGGRENIFKQIFGLTEGEEFLKASQCYLSTTRGPIAGLL 121
ET+K LS +G K+ I+ + + F+++FGL E LK CYL + P+ G L
Sbjct: 666 ETMKDYLSKVEKEVGKKLNIRSPQKNSAFQKLFGLPHEEFLLKEYTCYLK-RKLPVQGKL 724
Query: 122 FISNKKIAFCS 132
F+S + +AF S
Sbjct: 725 FLSARIVAFYS 735
>sp|Q96N67|DOCK7_HUMAN Dedicator of cytokinesis protein 7 OS=Homo sapiens GN=DOCK7 PE=1
SV=4
Length = 2140
Score = 31.6 bits (70), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 21/83 (25%), Positives = 37/83 (44%), Gaps = 8/83 (9%)
Query: 19 FRPRQTMTHLTVNADEEDTEMGQRKCIESKGSNFACRIRDHVKMGPKFSETVKSKLSLGA 78
+ PR T ++ +E + + R CI S ++A IR + K+G F+ K
Sbjct: 91 YSPRDCRTLVSAVPEESEMDPHVRDCIRSYTEDWAIVIRKYHKLGTGFNPNTLDK----- 145
Query: 79 KIIQKGGRENIFKQIFGLTEGEE 101
QK ++ + KQ+F E +
Sbjct: 146 ---QKERQKGLPKQVFESDEAPD 165
>sp|Q3AD49|HIS4_CARHZ 1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino]
imidazole-4-carboxamide isomerase OS=Carboxydothermus
hydrogenoformans (strain Z-2901 / DSM 6008) GN=hisA PE=3
SV=1
Length = 243
Score = 31.2 bits (69), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 28/59 (47%), Gaps = 10/59 (16%)
Query: 57 RDHVKMGPKFSETVKSKLSLGAKIIQKGG----------RENIFKQIFGLTEGEEFLKA 105
RD GP F+ET+K + G K+I GG RE +I+G+ G+ L+
Sbjct: 170 RDGSLTGPNFNETLKLAIDTGLKVIASGGISGLEDLRRWRELGENKIYGVIAGKAILEG 228
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.135 0.390
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,229,578
Number of Sequences: 539616
Number of extensions: 2708595
Number of successful extensions: 6116
Number of sequences better than 100.0: 27
Number of HSP's better than 100.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 18
Number of HSP's that attempted gapping in prelim test: 6101
Number of HSP's gapped (non-prelim): 28
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)