Your job contains 1 sequence.
>028248
MSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMEG
SEIVVEGPRCSLRSRKVYSDLSVDYLKMLLLNVPATVVALGLFFFLDDITGFEITYLLEL
PEPFSFIFTWFAAVPLIVYLSQSLTKLIVRESLILKGPCPNCGTENVSFFGTILSISSGG
TTNTINCSNCGTTMVYDSNTRLITLPEGSEA
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028248
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2127233 - symbol:PGR5-LIKE A "AT4G22890" speci... 946 4.2e-95 1
TAIR|locus:2118031 - symbol:PGRL1B "AT4G11960" species:37... 929 2.7e-93 1
TAIR|locus:2148338 - symbol:AT5G59400 "AT5G59400" species... 129 2.8e-10 2
>TAIR|locus:2127233 [details] [associations]
symbol:PGR5-LIKE A "AT4G22890" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM;IDA] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009579 "thylakoid" evidence=IDA]
[GO:0009773 "photosynthetic electron transport in photosystem I"
evidence=IGI;RCA] [GO:0015979 "photosynthesis" evidence=IGI]
[GO:0009534 "chloroplast thylakoid" evidence=IDA] [GO:0000023
"maltose metabolic process" evidence=RCA] [GO:0006098
"pentose-phosphate shunt" evidence=RCA] [GO:0006364 "rRNA
processing" evidence=RCA] [GO:0009637 "response to blue light"
evidence=RCA] [GO:0009657 "plastid organization" evidence=RCA]
[GO:0009902 "chloroplast relocation" evidence=RCA] [GO:0010027
"thylakoid membrane organization" evidence=RCA] [GO:0010114
"response to red light" evidence=RCA] [GO:0010207 "photosystem II
assembly" evidence=RCA] [GO:0010218 "response to far red light"
evidence=RCA] [GO:0010304 "PSII associated light-harvesting complex
II catabolic process" evidence=RCA] [GO:0019252 "starch
biosynthetic process" evidence=RCA] [GO:0019684 "photosynthesis,
light reaction" evidence=RCA] [GO:0034660 "ncRNA metabolic process"
evidence=RCA] [GO:0035304 "regulation of protein dephosphorylation"
evidence=RCA] [GO:0042742 "defense response to bacterium"
evidence=RCA] [GO:0043085 "positive regulation of catalytic
activity" evidence=RCA] GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR EMBL:AL031018 EMBL:AL161558 GO:GO:0009535
GO:GO:0009773 EMBL:BT000905 IPI:IPI00522157 IPI:IPI00846215
IPI:IPI00846580 PIR:T05120 RefSeq:NP_001078431.1
RefSeq:NP_001078432.1 RefSeq:NP_567672.1 RefSeq:NP_849422.1
RefSeq:NP_849423.1 UniGene:At.2370 IntAct:Q8H112 STRING:Q8H112
PaxDb:Q8H112 PRIDE:Q8H112 EnsemblPlants:AT4G22890.1
EnsemblPlants:AT4G22890.2 EnsemblPlants:AT4G22890.3 GeneID:828388
KEGG:ath:AT4G22890 TAIR:At4g22890 eggNOG:NOG331578
HOGENOM:HOG000006357 InParanoid:Q8H112 OMA:DYFKMLL PhylomeDB:Q8H112
ProtClustDB:CLSN2689563 Genevestigator:Q8H112 Uniprot:Q8H112
Length = 324
Score = 946 (338.1 bits), Expect = 4.2e-95, P = 4.2e-95
Identities = 177/211 (83%), Positives = 199/211 (94%)
Query: 1 MSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMEG 60
MSNEEFDNLKEELMWEGSSVVMLSS EQ+FLEASMAYV+G PI++DEEYDKLK KLK++G
Sbjct: 114 MSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILNDEEYDKLKLKLKIDG 173
Query: 61 SEIVVEGPRCSLRSRKVYSDLSVDYLKMLLLNVPATVVALGLFFFLDDITGFEITYLLEL 120
S+IV EGPRCSLRS+KVYSDL+VDY KMLLLNVPATVVALGLFFFLDDITGFEITY++EL
Sbjct: 174 SDIVSEGPRCSLRSKKVYSDLAVDYFKMLLLNVPATVVALGLFFFLDDITGFEITYIMEL 233
Query: 121 PEPFSFIFTWFAAVPLIVYLSQSLTKLIVRESLILKGPCPNCGTENVSFFGTILSISSGG 180
PEP+SFIFTWFAAVP+IVYL+ S+TKLI+++ LILKGPCPNCGTEN SFFGTILSISSGG
Sbjct: 234 PEPYSFIFTWFAAVPVIVYLALSITKLIIKDFLILKGPCPNCGTENTSFFGTILSISSGG 293
Query: 181 TTNTINCSNCGTTMVYDSNTRLITLPEGSEA 211
TNT+ C+NCGT MVYDS +RLITLPEGS+A
Sbjct: 294 KTNTVKCTNCGTAMVYDSGSRLITLPEGSQA 324
>TAIR|locus:2118031 [details] [associations]
symbol:PGRL1B "AT4G11960" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0009507
"chloroplast" evidence=ISM] [GO:0009535 "chloroplast thylakoid
membrane" evidence=IDA] [GO:0009773 "photosynthetic electron
transport in photosystem I" evidence=IGI;RCA] [GO:0015979
"photosynthesis" evidence=IGI] [GO:0015996 "chlorophyll catabolic
process" evidence=RCA] GO:GO:0016021 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0009535 EMBL:AL049638 EMBL:AL161533
GO:GO:0009773 UniGene:At.2370 eggNOG:NOG331578 HOGENOM:HOG000006357
ProtClustDB:CLSN2689563 EMBL:AK117721 EMBL:BT005305 IPI:IPI00526712
PIR:T06603 RefSeq:NP_192933.2 UniGene:At.23036 STRING:Q8GYC7
PaxDb:Q8GYC7 PRIDE:Q8GYC7 EnsemblPlants:AT4G11960.1 GeneID:826803
KEGG:ath:AT4G11960 TAIR:At4g11960 InParanoid:Q8GYC7 OMA:NCGTENV
PhylomeDB:Q8GYC7 Genevestigator:Q8GYC7 Uniprot:Q8GYC7
Length = 313
Score = 929 (332.1 bits), Expect = 2.7e-93, P = 2.7e-93
Identities = 177/211 (83%), Positives = 192/211 (90%)
Query: 1 MSNEEFDNLKEELMWEGSSVVMLSSAEQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMEG 60
MSNEEFDNLKEELMWEGSSVVMLSS EQ+FLEASMAYV+G PI+SDEEYDKLK KLKM+G
Sbjct: 103 MSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYVSGNPILSDEEYDKLKMKLKMDG 162
Query: 61 SEIVVEGPRCSLRSRKVYSDLSVDYLKMLLLNVPATVVALGLFFFLDDITGFEITYLLEL 120
SEIV EGPRCSLRS+KVYSDL++DY KM LLNVPATVVALGLFFFLDDITGFEITYLLEL
Sbjct: 163 SEIVCEGPRCSLRSKKVYSDLAIDYFKMFLLNVPATVVALGLFFFLDDITGFEITYLLEL 222
Query: 121 PEPFSFIFTWFAAVPLIVYLSQSLTKLIVRESLILKGPCPNCGTENVSFFGTILSISSGG 180
PEPFSFIFTWFAAVP IVYL+ SLTKLI+++ LILKGPCPNCGTENVSFFGTILSI +
Sbjct: 223 PEPFSFIFTWFAAVPAIVYLALSLTKLILKDFLILKGPCPNCGTENVSFFGTILSIPNDS 282
Query: 181 TTNTINCSNCGTTMVYDSNTRLITLPEGSEA 211
TN + CS CGT MVYDS +RLITLPEG +A
Sbjct: 283 NTNNVKCSGCGTEMVYDSGSRLITLPEGGKA 313
Score = 108 (43.1 bits), Expect = 0.00084, P = 0.00084
Identities = 31/89 (34%), Positives = 45/89 (50%)
Query: 23 LSSAEQKFLEASMA-YVAGKPIMSDEEYDKLKQKLKMEGSEIVV---------EGPRCSL 72
+ EQ+FL+A + Y GK IMS+EE+D LK++L EGS +V+ E +
Sbjct: 81 IGEMEQEFLQAMQSFYYEGKAIMSNEEFDNLKEELMWEGSSVVMLSSDEQRFLEASMAYV 140
Query: 73 RSRKVYSDLSVDYLKMLLLNVPATVVALG 101
+ SD D LKM L + +V G
Sbjct: 141 SGNPILSDEEYDKLKMKLKMDGSEIVCEG 169
>TAIR|locus:2148338 [details] [associations]
symbol:AT5G59400 "AT5G59400" species:3702 "Arabidopsis
thaliana" [GO:0003674 "molecular_function" evidence=ND] [GO:0008150
"biological_process" evidence=ND] [GO:0009507 "chloroplast"
evidence=ISM] EMBL:CP002688 IPI:IPI00540129 RefSeq:NP_568906.2
UniGene:At.29226 UniGene:At.9719 ProteinModelPortal:F4KJ54
SMR:F4KJ54 EnsemblPlants:AT5G59400.2 GeneID:836059
KEGG:ath:AT5G59400 OMA:PLIVDDM Uniprot:F4KJ54
Length = 301
Score = 129 (50.5 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 31/79 (39%), Positives = 49/79 (62%)
Query: 27 EQKFLEASMAYVAGKPIMSDEEYDKLKQKLKMEGSEIVVEGPRCSLRSRKVYSDLSVDYL 86
E + +A AY GKP++ D+ +D+++ KL+ GS+ VV+ PRCSL + Y+D D
Sbjct: 75 EALYRQAKDAYYNGKPLIVDDMFDRVELKLRWYGSKSVVKYPRCSLLRQSTYADAEDDAS 134
Query: 87 KMLLLNVPATVVALGLFFF 105
++LLL ATV + +F F
Sbjct: 135 QVLLL---ATVWIM-IFLF 149
Score = 69 (29.3 bits), Expect = 2.8e-10, Sum P(2) = 2.8e-10
Identities = 15/42 (35%), Positives = 22/42 (52%)
Query: 155 LKGPCPNCGTENVSFFGTILSISSGGTTNTINCSNCGTTMVY 196
LKG CPNCG E +F + S S + + +C C T+ +
Sbjct: 226 LKGDCPNCGEEVFAF---VRSDQSNRSAHKADCHVCECTLEF 264
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.318 0.135 0.388 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 211 0.00081 112 3 11 22 0.37 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 3
No. of states in DFA: 583 (62 KB)
Total size of DFA: 156 KB (2094 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 18.76u 0.09s 18.85t Elapsed: 00:00:01
Total cpu time: 18.76u 0.09s 18.85t Elapsed: 00:00:01
Start: Fri May 10 09:56:13 2013 End: Fri May 10 09:56:14 2013