BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028252
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9WU63|HEBP2_MOUSE Heme-binding protein 2 OS=Mus musculus GN=Hebp2 PE=1 SV=1
Length = 205
Score = 70.5 bits (171), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 9/162 (5%)
Query: 37 FEIRLYGEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTSINPTT 96
+EIR YG A W S V+ + ++ + GF +L YI G N + +TAPV + + P +
Sbjct: 38 YEIRHYGPAKWVSTCVESLDWDSAIQTGFTKLNGYIQGKNEKEMKIKLTAPVTSYVEPGS 97
Query: 97 A--NGSVCYVKIYLTAKSPPQP--NSELNLEIEKWTSHCIAVRKFSGFAKDDNINKEVEA 152
+ + S + +Y+ ++ P P SE ++ IE + VR F GF+ +++
Sbjct: 98 SPFSESTITISLYIPSEQQPDPPRPSESDVFIEDRAEMTVFVRSFDGFSSGQKNQEQLLT 157
Query: 153 LMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVWM 194
L N L + +K+ YT A Y+S R NEVW+
Sbjct: 158 LANILREE----GKVFNEKVFYT-AGYSSPFQLLDRNNEVWL 194
>sp|Q9Y5Z4|HEBP2_HUMAN Heme-binding protein 2 OS=Homo sapiens GN=HEBP2 PE=1 SV=1
Length = 205
Score = 70.5 bits (171), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 50/163 (30%), Positives = 82/163 (50%), Gaps = 11/163 (6%)
Query: 37 FEIRLYGEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTSINPTT 96
+EIR YG A W S V+ + ++ + GF +L YI G N + +TAPV + + P +
Sbjct: 38 YEIRHYGPAKWVSTSVESMDWDSAIQTGFTKLNSYIQGKNEKEMKIKMTAPVTSYVEPGS 97
Query: 97 A--NGSVCYVKIYLTAK---SPPQPNSELNLEIEKWTSHCIAVRKFSGFAKDDNINKEVE 151
+ S + +Y+ ++ PP+P E ++ IE + VR F GF+ + K E
Sbjct: 98 GPFSESTITISLYIPSEQQFDPPRP-LESDVFIEDRAEMTVFVRSFDGFS---SAQKNQE 153
Query: 152 ALMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVWM 194
L+ +L + + ++K+ YT A YNS R NEVW+
Sbjct: 154 QLL-TLASILREDGKVFDEKVYYT-AGYNSPVKLLNRNNEVWL 194
>sp|Q6NU05|HEBP1_XENLA Heme-binding protein 1 OS=Xenopus laevis GN=hebp1 PE=2 SV=1
Length = 190
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 48/172 (27%), Positives = 75/172 (43%), Gaps = 15/172 (8%)
Query: 30 VVHSESD---FEIRLYGEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTA 86
V E D FE R Y + S V F ++K+G RL +Y+ G+N SA +T+
Sbjct: 21 VSKGEKDGVAFEEREYEGGKFISTEVSGKPFDEASKEGVLRLLKYVGGSNNKSAGMGMTS 80
Query: 87 PVLTSINPTTANGSVCYVKIYLTAKS-----PPQPNSELNLEIEKWTSHCIAVRKFSGFA 141
PV+ + P+ + VK+ L S PP P ++ ++IE S + +F G+A
Sbjct: 81 PVIINSYPSENDTLQPNVKVLLRIPSQYQADPPVP-TDNTIQIEDRESVTLYSTQFGGYA 139
Query: 142 KDDNINKEVEALMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVW 193
KE + + ++ L I+ Y Y+ GR NEVW
Sbjct: 140 ------KEADYVSHAAKLRSCLGPDISYHSDYYMCCGYDPPMKPYGRRNEVW 185
>sp|Q6DJ66|HEBP1_XENTR Heme-binding protein 1 OS=Xenopus tropicalis GN=hebp1 PE=2 SV=1
Length = 190
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 65/163 (39%), Gaps = 12/163 (7%)
Query: 37 FEIRLYGEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTSINPTT 96
FE R Y + S V F ++K+ RL +Y+ G+N A +T+PV+ + P
Sbjct: 31 FEEREYEGGKFVSTEVSGKPFDEASKEAVLRLLKYVGGSNQKYAGMGMTSPVVITSYPAE 90
Query: 97 ANGSVCYVKIYLTAKS-----PPQPNSELNLEIEKWTSHCIAVRKFSGFAKDDNINKEVE 151
VK+ L S PP P + + IE S +F G+AK+ +
Sbjct: 91 NETLQPNVKVLLRIPSQYQADPPVPTDD-TIHIEDRESVTFYSTQFGGYAKEADYVSHAA 149
Query: 152 ALMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVWM 194
L + L + +T Y Y+ GR NEVW
Sbjct: 150 KLRSCLGPDISYHTD------HYMCCGYDPPMKPYGRRNEVWF 186
>sp|Q5ZMB2|HEBP1_CHICK Heme-binding protein 1 OS=Gallus gallus GN=HEBP1 PE=2 SV=1
Length = 189
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/152 (27%), Positives = 65/152 (42%), Gaps = 12/152 (7%)
Query: 47 WASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTSINPTTANGSVCYVKI 106
+A V F ++K+ +L +Y+ G+N A +TAPV + P VK+
Sbjct: 41 FAVVEVTGKPFDEASKEAALKLLKYVGGSNDKGAGMGMTAPVSITAFPAEDGSLQQKVKV 100
Query: 107 YLT-----AKSPPQPNSELNLEIEKWTSHCIAVRKFSGFAKDDNINKEVEALMNSLNLHF 161
YL SPP P+ E +++IE+ I +F G+A KEV+ + + L
Sbjct: 101 YLRIPNQFQASPPCPSDE-SIKIEERQGMTIYSTQFGGYA------KEVDYVNYAAKLKT 153
Query: 162 TGNTSITEDKLSYTIAQYNSSRHQAGRLNEVW 193
+ K Y Y+ GR NEVW
Sbjct: 154 ALGSEAAYRKDFYFCNGYDPPMKPYGRRNEVW 185
>sp|Q5ISC6|HEBP1_PIG Heme-binding protein 1 OS=Sus scrofa GN=HEBP1 PE=2 SV=1
Length = 189
Score = 40.0 bits (92), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 29/142 (20%), Positives = 61/142 (42%), Gaps = 12/142 (8%)
Query: 58 QNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTSINPTTANGSVCYVKIYLT-----AKS 112
+ ++ ++ +Y+ G+N +T P+ ++ P+ +K++ +
Sbjct: 52 DEALREAMPKVMKYVGGSNDKGIGMGMTVPISFAVFPSDGGSLQKKLKVWFRIPNEFQSN 111
Query: 113 PPQPNSELNLEIEKWTSHCIAVRKFSGFAKDDNINKEVEALMNSLNLHFTGNTSITEDKL 172
PP P S+ +++IE+ S + +F G+AK+ + L +L T + +
Sbjct: 112 PPVP-SDDSIKIEERESITVYSLQFGGYAKEADYVARAAQLRTALEGIATCRSDV----- 165
Query: 173 SYTIAQYNSSRHQAGRLNEVWM 194
Y Y+ GR NEVW+
Sbjct: 166 -YFCTGYDPPMKPYGRRNEVWL 186
>sp|Q9NRV9|HEBP1_HUMAN Heme-binding protein 1 OS=Homo sapiens GN=HEBP1 PE=1 SV=1
Length = 189
Score = 36.2 bits (82), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 33/168 (19%), Positives = 64/168 (38%), Gaps = 12/168 (7%)
Query: 32 HSESDFEIRLYGEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLNSARFPVTAPVLTS 91
E +E R +A+ V + ++ ++ +Y G N +T P+ +
Sbjct: 26 KEEVAYEERACEGGKFATVEVTDKPVDEALREAMPKVAKYAGGTNDKGIGMGMTVPISFA 85
Query: 92 INPTTANGSVCYVKIYLT-----AKSPPQPNSELNLEIEKWTSHCIAVRKFSGFAKDDNI 146
+ P +K++ PP P S+ +++IE+ + +F G+AK+ +
Sbjct: 86 VFPNEDGSLQKKLKVWFRIPNQFQSDPPAP-SDKSVKIEEREGITVYSMQFGGYAKEADY 144
Query: 147 NKEVEALMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVWM 194
+ L +L T I Y Y+ GR NE+W+
Sbjct: 145 VAQATRLRAALEGTATYRGDI------YFCTGYDPPMKPYGRRNEIWL 186
>sp|Q04712|RRN11_YEAST RNA polymerase I-specific transcription initiation factor RRN11
OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
GN=RRN11 PE=1 SV=1
Length = 507
Score = 33.5 bits (75), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 4/43 (9%)
Query: 3 LHLVPIVLPVCLVLSGFAIAMESPHYAVVHSESDFEIRLYGEA 45
+H V L +CL GFA+ P + + FE RLYGEA
Sbjct: 408 IHYVRTFLKICLDKGGFAV----PSRLIENQLKSFESRLYGEA 446
>sp|Q6PJW8|CNST_HUMAN Consortin OS=Homo sapiens GN=CNST PE=1 SV=3
Length = 725
Score = 31.6 bits (70), Expect = 4.2, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 19/33 (57%), Gaps = 3/33 (9%)
Query: 142 KDDNINKEVEALMNSLNLHFTGNTSITEDKLSY 174
KDD +NKE E +NSL G TED LSY
Sbjct: 536 KDDQLNKETEDYLNSL---LEGCLKDTEDSLSY 565
>sp|P06996|OMPC_ECOLI Outer membrane protein C OS=Escherichia coli (strain K12) GN=ompC
PE=1 SV=1
Length = 367
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 20/69 (28%), Positives = 28/69 (40%), Gaps = 4/69 (5%)
Query: 147 NKEVEALMNSLNLHFTGNTSITEDKLSYTIAQYNSSRHQAGRLNEVWMNVP----GFNAE 202
NK+V+ + L F G T +T+ Y +Y + A N W V F
Sbjct: 47 NKDVDGDQTYMRLGFKGETQVTDQLTGYGQWEYQIQGNSAENENNSWTRVAFAGLKFQDV 106
Query: 203 GCSNYRRNY 211
G +Y RNY
Sbjct: 107 GSFDYGRNY 115
>sp|Q9WUT3|KS6A2_MOUSE Ribosomal protein S6 kinase alpha-2 OS=Mus musculus GN=Rps6ka2 PE=2
SV=1
Length = 733
Score = 30.4 bits (67), Expect = 9.3, Method: Compositional matrix adjust.
Identities = 15/36 (41%), Positives = 22/36 (61%)
Query: 43 GEAFWASALVQRSSFQNSTKQGFHRLYQYIHGANLN 78
G +F AS+LVQ S Q+ K H + Q +HG N++
Sbjct: 375 GFSFVASSLVQEPSQQDVPKAPIHPIVQQLHGNNIH 410
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.318 0.131 0.398
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 78,470,801
Number of Sequences: 539616
Number of extensions: 3012975
Number of successful extensions: 6511
Number of sequences better than 100.0: 14
Number of HSP's better than 100.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 9
Number of HSP's that attempted gapping in prelim test: 6500
Number of HSP's gapped (non-prelim): 14
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)