Query 028256
Match_columns 211
No_of_seqs 148 out of 1188
Neff 6.7
Searched_HMMs 29240
Date Mon Mar 25 14:07:42 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028256.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028256hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sbx_A Putative uncharacterize 100.0 1E-56 3.4E-61 371.6 21.3 175 19-194 14-188 (189)
2 1ydh_A AT5G11950; structural g 100.0 2E-56 6.8E-61 376.9 20.2 186 15-200 6-191 (216)
3 3qua_A Putative uncharacterize 100.0 5.5E-56 1.9E-60 369.8 20.0 179 15-194 19-197 (199)
4 2a33_A Hypothetical protein; s 100.0 1.9E-55 6.4E-60 370.8 21.1 190 12-201 7-196 (215)
5 1t35_A Hypothetical protein YV 100.0 9.6E-56 3.3E-60 366.5 17.5 183 18-200 1-183 (191)
6 1wek_A Hypothetical protein TT 100.0 6.2E-50 2.1E-54 337.6 21.0 179 18-199 37-216 (217)
7 1weh_A Conserved hypothetical 100.0 1.4E-49 4.8E-54 324.2 16.5 168 18-195 1-170 (171)
8 3gh1_A Predicted nucleotide-bi 100.0 7.5E-47 2.6E-51 342.9 19.5 180 13-198 141-333 (462)
9 1rcu_A Conserved hypothetical 100.0 3.9E-45 1.3E-49 303.7 16.8 170 12-197 17-193 (195)
10 3bq9_A Predicted rossmann fold 100.0 7E-45 2.4E-49 331.8 18.3 178 13-196 139-329 (460)
11 2iz6_A Molybdenum cofactor car 100.0 4.5E-42 1.5E-46 281.2 11.2 165 14-198 9-173 (176)
12 3maj_A DNA processing chain A; 99.5 2.8E-12 9.5E-17 115.6 17.5 157 18-195 127-303 (382)
13 3uqz_A DNA processing protein 99.4 1.2E-11 4.2E-16 107.6 16.3 157 18-194 106-281 (288)
14 3imk_A Putative molybdenum car 98.0 0.00022 7.5E-09 56.5 13.5 96 52-154 10-110 (158)
15 2nx2_A Hypothetical protein YP 97.8 0.00097 3.3E-08 53.9 15.0 132 17-152 1-169 (181)
16 2khz_A C-MYC-responsive protei 95.9 0.018 6.1E-07 45.5 6.8 81 104-197 67-149 (165)
17 2f62_A Nucleoside 2-deoxyribos 95.7 0.01 3.6E-07 47.0 4.4 88 103-198 56-159 (161)
18 4fyk_A Deoxyribonucleoside 5'- 95.3 0.029 9.8E-07 44.2 5.7 83 103-198 57-141 (152)
19 2o6l_A UDP-glucuronosyltransfe 95.1 0.36 1.2E-05 36.6 11.6 64 113-197 85-152 (170)
20 1f8y_A Nucleoside 2-deoxyribos 94.3 0.038 1.3E-06 43.5 4.1 45 104-154 68-116 (157)
21 3ehd_A Uncharacterized conserv 93.8 0.23 7.8E-06 39.3 7.8 85 103-197 58-161 (162)
22 2p6p_A Glycosyl transferase; X 92.2 3.8 0.00013 34.8 13.9 32 111-152 276-307 (384)
23 2jzc_A UDP-N-acetylglucosamine 92.2 0.85 2.9E-05 37.6 9.3 52 111-172 128-181 (224)
24 3otg_A CALG1; calicheamicin, T 92.1 2.1 7.3E-05 36.5 12.2 33 110-152 304-336 (412)
25 3rsc_A CALG2; TDP, enediyne, s 90.7 3.4 0.00012 35.4 12.0 32 110-151 309-340 (415)
26 1s2d_A Purine trans deoxyribos 90.5 0.4 1.4E-05 37.9 5.3 42 104-151 71-116 (167)
27 2iya_A OLEI, oleandomycin glyc 90.1 4.5 0.00016 34.9 12.4 67 111-197 318-387 (424)
28 3s2u_A UDP-N-acetylglucosamine 89.8 1.8 6E-05 37.4 9.4 102 15-151 177-279 (365)
29 3hbm_A UDP-sugar hydrolase; PS 89.3 6.8 0.00023 33.1 12.6 37 101-152 216-252 (282)
30 3h4t_A Glycosyltransferase GTF 88.6 8.3 0.00028 33.3 13.0 88 49-151 221-311 (404)
31 2yjn_A ERYCIII, glycosyltransf 88.5 3.3 0.00011 36.2 10.4 32 111-152 332-363 (441)
32 3ia7_A CALG4; glycosysltransfe 87.7 4.6 0.00016 34.1 10.5 32 110-151 293-324 (402)
33 1rrv_A Glycosyltransferase GTF 86.9 11 0.00037 32.5 12.7 95 42-152 229-330 (416)
34 4fzr_A SSFS6; structural genom 86.0 3.2 0.00011 35.5 8.6 34 109-152 295-328 (398)
35 3rpz_A ADP/ATP-dependent NAD(P 85.6 0.79 2.7E-05 39.0 4.4 102 48-156 29-136 (279)
36 1iir_A Glycosyltransferase GTF 85.5 9.8 0.00033 32.8 11.6 95 42-152 230-329 (415)
37 3ufx_B Succinyl-COA synthetase 83.9 4 0.00014 36.3 8.5 119 61-203 258-380 (397)
38 2iyf_A OLED, oleandomycin glyc 82.0 16 0.00056 31.2 11.5 33 110-152 295-327 (430)
39 3oti_A CALG3; calicheamicin, T 78.7 4.8 0.00016 34.4 6.9 31 111-151 296-326 (398)
40 2gk4_A Conserved hypothetical 78.2 3.5 0.00012 34.2 5.6 70 51-123 5-93 (232)
41 3dmy_A Protein FDRA; predicted 76.9 8.8 0.0003 35.1 8.4 75 115-198 329-413 (480)
42 3hbf_A Flavonoid 3-O-glucosylt 76.7 6.5 0.00022 35.5 7.4 40 110-160 339-379 (454)
43 1pl8_A Human sorbitol dehydrog 76.4 12 0.00041 31.9 8.8 155 51-210 174-353 (356)
44 2f9f_A First mannosyl transfer 75.5 11 0.00037 28.3 7.4 69 107-197 90-160 (177)
45 3rss_A Putative uncharacterize 75.2 8.5 0.00029 35.3 7.8 102 48-154 243-357 (502)
46 3ico_A 6PGL, 6-phosphogluconol 71.8 18 0.00062 30.3 8.5 81 113-194 53-145 (268)
47 2an1_A Putative kinase; struct 71.1 7.5 0.00026 32.5 6.0 59 18-80 5-93 (292)
48 3tsa_A SPNG, NDP-rhamnosyltran 71.1 7.2 0.00024 33.0 6.0 66 112-197 284-354 (391)
49 2pq6_A UDP-glucuronosyl/UDP-gl 71.1 21 0.00073 31.8 9.4 68 111-197 366-437 (482)
50 3tx2_A Probable 6-phosphogluco 69.3 26 0.00089 28.9 8.9 83 112-195 36-130 (251)
51 1v4v_A UDP-N-acetylglucosamine 67.3 8.5 0.00029 32.3 5.6 65 107-197 267-332 (376)
52 3qlj_A Short chain dehydrogena 66.5 43 0.0015 27.9 9.9 42 39-80 40-91 (322)
53 3f6r_A Flavodoxin; FMN binding 66.1 4 0.00014 30.2 2.9 33 18-53 1-33 (148)
54 1gvf_A Tagatose-bisphosphate a 65.9 61 0.0021 27.5 11.7 102 24-134 102-220 (286)
55 2hna_A Protein MIOC, flavodoxi 65.1 10 0.00034 28.0 5.0 34 18-54 1-34 (147)
56 3beo_A UDP-N-acetylglucosamine 65.1 57 0.002 26.8 13.0 65 107-197 275-340 (375)
57 3qhp_A Type 1 capsular polysac 64.5 19 0.00064 26.2 6.5 69 107-197 67-138 (166)
58 4dmm_A 3-oxoacyl-[acyl-carrier 64.5 25 0.00085 28.6 7.8 42 39-80 41-83 (269)
59 1rjw_A ADH-HT, alcohol dehydro 64.2 26 0.0009 29.4 8.2 141 50-196 166-326 (339)
60 3oc6_A 6-phosphogluconolactona 64.2 27 0.00093 28.7 8.0 83 112-195 36-130 (248)
61 1f0k_A MURG, UDP-N-acetylgluco 62.8 62 0.0021 26.5 15.1 71 110-196 250-322 (364)
62 4e3z_A Putative oxidoreductase 62.6 36 0.0012 27.4 8.4 42 39-80 39-81 (272)
63 2i2c_A Probable inorganic poly 62.6 15 0.00053 30.4 6.2 57 19-80 1-67 (272)
64 3qiv_A Short-chain dehydrogena 61.2 53 0.0018 25.9 9.1 55 18-80 9-63 (253)
65 3k5w_A Carbohydrate kinase; 11 61.1 15 0.00052 33.5 6.3 116 48-194 235-352 (475)
66 2ph1_A Nucleotide-binding prot 60.8 14 0.00047 30.0 5.5 46 7-55 7-52 (262)
67 3q94_A Fructose-bisphosphate a 60.5 78 0.0027 26.9 11.5 102 25-135 109-225 (288)
68 4ffl_A PYLC; amino acid, biosy 60.1 29 0.00098 29.4 7.7 67 53-124 5-73 (363)
69 1nns_A L-asparaginase II; amid 59.8 19 0.00065 31.1 6.5 52 111-165 76-132 (326)
70 1rzu_A Glycogen synthase 1; gl 59.6 85 0.0029 27.0 12.8 73 109-197 360-438 (485)
71 3ff4_A Uncharacterized protein 59.5 12 0.00041 27.6 4.5 34 16-54 2-35 (122)
72 2qzs_A Glycogen synthase; glyc 59.3 86 0.003 27.0 13.0 73 109-197 361-439 (485)
73 3h7a_A Short chain dehydrogena 58.0 41 0.0014 26.9 8.0 56 17-80 6-61 (252)
74 4eg0_A D-alanine--D-alanine li 58.0 14 0.00049 30.7 5.3 44 18-61 13-56 (317)
75 2bfw_A GLGA glycogen synthase; 58.0 30 0.001 25.8 6.8 69 108-198 109-179 (200)
76 2g1u_A Hypothetical protein TM 55.3 59 0.002 23.8 9.0 74 50-126 20-96 (155)
77 3fpc_A NADP-dependent alcohol 54.6 15 0.0005 31.2 4.8 154 50-206 168-351 (352)
78 3ip1_A Alcohol dehydrogenase, 54.0 33 0.0011 29.7 7.1 30 51-82 216-246 (404)
79 3s2e_A Zinc-containing alcohol 53.6 44 0.0015 27.9 7.7 30 51-82 169-198 (340)
80 1vgv_A UDP-N-acetylglucosamine 53.4 94 0.0032 25.6 14.7 65 107-197 275-340 (384)
81 2jjm_A Glycosyl transferase, g 52.6 46 0.0016 27.8 7.6 67 110-197 280-348 (394)
82 2qv7_A Diacylglycerol kinase D 52.6 11 0.00037 32.2 3.7 42 41-83 71-114 (337)
83 2c1x_A UDP-glucose flavonoid 3 52.1 27 0.00094 30.9 6.4 40 118-169 346-385 (456)
84 2bon_A Lipid kinase; DAG kinas 52.1 15 0.0005 31.3 4.4 43 41-84 73-119 (332)
85 2b69_A UDP-glucuronate decarbo 51.0 18 0.00063 30.0 4.8 44 4-55 13-56 (343)
86 2ark_A Flavodoxin; FMN, struct 50.8 10 0.00036 29.2 3.0 35 16-53 2-37 (188)
87 1wls_A L-asparaginase; structu 50.8 22 0.00077 30.7 5.4 51 113-165 72-127 (328)
88 3qwb_A Probable quinone oxidor 50.4 48 0.0017 27.6 7.4 43 162-205 289-331 (334)
89 4amg_A Snogd; transferase, pol 49.6 49 0.0017 27.6 7.4 31 111-151 301-331 (400)
90 2acv_A Triterpene UDP-glucosyl 49.0 24 0.00082 31.3 5.5 106 40-159 264-383 (463)
91 2iw1_A Lipopolysaccharide core 48.7 56 0.0019 26.7 7.5 67 109-197 265-335 (374)
92 3sju_A Keto reductase; short-c 48.1 43 0.0015 27.2 6.6 55 18-80 24-78 (279)
93 3s40_A Diacylglycerol kinase; 48.0 14 0.00049 31.0 3.6 42 40-83 54-97 (304)
94 3llv_A Exopolyphosphatase-rela 47.9 56 0.0019 23.3 6.6 37 112-152 68-104 (141)
95 3dzc_A UDP-N-acetylglucosamine 47.8 1.3E+02 0.0045 25.7 13.0 66 107-197 300-365 (396)
96 3c48_A Predicted glycosyltrans 47.6 66 0.0023 27.1 7.9 71 106-197 317-389 (438)
97 2him_A L-asparaginase 1; hydro 47.6 36 0.0012 29.8 6.3 53 111-165 98-155 (358)
98 3fro_A GLGA glycogen synthase; 47.5 1.2E+02 0.0041 25.1 14.8 69 108-198 324-394 (439)
99 3okp_A GDP-mannose-dependent a 46.8 64 0.0022 26.5 7.6 71 106-198 264-343 (394)
100 3ek6_A Uridylate kinase; UMPK 46.7 1.1E+02 0.0039 24.6 14.5 49 107-157 121-172 (243)
101 3nxk_A Cytoplasmic L-asparagin 46.1 41 0.0014 29.1 6.4 49 113-164 87-140 (334)
102 1jfl_A Aspartate racemase; alp 46.0 42 0.0014 26.7 6.1 42 41-82 65-123 (228)
103 2vch_A Hydroquinone glucosyltr 46.0 60 0.0021 28.9 7.7 41 110-161 351-392 (480)
104 3c48_A Predicted glycosyltrans 45.4 22 0.00077 30.2 4.6 39 15-53 17-62 (438)
105 2q5c_A NTRC family transcripti 45.4 53 0.0018 25.8 6.5 57 18-80 94-166 (196)
106 3hly_A Flavodoxin-like domain; 45.3 22 0.00074 26.8 4.0 30 20-52 2-31 (161)
107 3gms_A Putative NADPH:quinone 45.2 22 0.00074 29.9 4.4 37 161-197 285-321 (340)
108 3zqu_A Probable aromatic acid 45.0 39 0.0013 27.3 5.7 77 115-194 95-183 (209)
109 1oi7_A Succinyl-COA synthetase 44.7 92 0.0031 26.0 8.2 88 103-197 186-287 (288)
110 3lwd_A 6-phosphogluconolactona 44.7 28 0.00096 28.3 4.8 78 112-196 30-118 (226)
111 3nwp_A 6-phosphogluconolactona 44.6 50 0.0017 26.8 6.4 80 111-197 33-123 (233)
112 2xci_A KDO-transferase, 3-deox 44.5 41 0.0014 28.7 6.1 69 109-198 272-345 (374)
113 2d6f_A Glutamyl-tRNA(Gln) amid 44.4 39 0.0013 30.5 6.1 49 114-165 167-220 (435)
114 1o7j_A L-asparaginase; atomic 44.0 44 0.0015 28.7 6.2 49 114-165 85-138 (327)
115 1iow_A DD-ligase, DDLB, D-ALA\ 43.9 37 0.0013 27.5 5.5 39 19-57 3-41 (306)
116 1e3i_A Alcohol dehydrogenase, 43.8 1.3E+02 0.0046 25.3 9.3 142 51-195 198-366 (376)
117 4pga_A Glutaminase-asparaginas 43.7 32 0.0011 29.8 5.3 49 114-165 90-143 (337)
118 3tox_A Short chain dehydrogena 43.6 1E+02 0.0035 25.0 8.3 19 39-57 21-39 (280)
119 1id1_A Putative potassium chan 42.6 25 0.00087 25.8 4.0 74 49-125 3-82 (153)
120 4eez_A Alcohol dehydrogenase 1 42.5 29 0.001 29.0 4.8 43 165-209 299-341 (348)
121 3s99_A Basic membrane lipoprot 42.5 40 0.0014 29.1 5.8 41 37-80 195-235 (356)
122 3ezl_A Acetoacetyl-COA reducta 42.3 44 0.0015 26.4 5.6 34 16-57 11-44 (256)
123 2wlt_A L-asparaginase; hydrola 42.0 51 0.0017 28.4 6.3 49 114-165 85-138 (332)
124 4ici_A Putative flavoprotein; 41.7 15 0.00051 28.2 2.6 80 112-196 85-168 (171)
125 1hdo_A Biliverdin IX beta redu 41.7 1E+02 0.0036 22.7 8.3 16 111-126 64-79 (206)
126 3end_A Light-independent proto 41.2 37 0.0013 27.9 5.2 40 11-54 34-73 (307)
127 3dzc_A UDP-N-acetylglucosamine 41.1 1.7E+02 0.0058 25.0 10.8 42 13-59 20-64 (396)
128 1cdo_A Alcohol dehydrogenase; 41.1 85 0.0029 26.5 7.6 81 51-134 195-282 (374)
129 1yqd_A Sinapyl alcohol dehydro 40.9 1E+02 0.0036 26.0 8.2 81 51-135 190-272 (366)
130 3oy2_A Glycosyltransferase B73 40.8 83 0.0028 26.3 7.5 76 106-198 265-354 (413)
131 3uko_A Alcohol dehydrogenase c 40.8 70 0.0024 27.2 7.0 83 50-135 195-284 (378)
132 3ot5_A UDP-N-acetylglucosamine 40.7 34 0.0012 29.7 5.1 65 106-197 293-359 (403)
133 1eiw_A Hypothetical protein MT 40.7 34 0.0012 24.8 4.3 67 112-198 36-109 (111)
134 3jv7_A ADH-A; dehydrogenase, n 40.6 60 0.002 27.2 6.5 142 50-197 173-336 (345)
135 4id9_A Short-chain dehydrogena 40.5 28 0.00095 28.8 4.3 42 6-55 7-48 (347)
136 1f4p_A Flavodoxin; electron tr 40.4 19 0.00065 26.2 2.9 31 20-53 2-32 (147)
137 1agx_A Glutaminase-asparaginas 40.3 49 0.0017 28.5 5.9 49 114-165 82-135 (331)
138 3tjr_A Short chain dehydrogena 40.3 83 0.0029 25.8 7.3 55 19-81 32-86 (301)
139 3s2u_A UDP-N-acetylglucosamine 40.3 1.7E+02 0.0057 24.7 10.4 116 19-153 3-124 (365)
140 1wsa_A Asparaginase, asparagin 40.3 53 0.0018 28.2 6.1 49 114-165 83-136 (330)
141 2fp4_B Succinyl-COA ligase [GD 40.0 1.6E+02 0.0053 25.9 9.3 71 115-196 318-391 (395)
142 2jhf_A Alcohol dehydrogenase E 39.8 1.1E+02 0.0037 25.9 8.1 82 51-135 194-282 (374)
143 1sb8_A WBPP; epimerase, 4-epim 39.8 72 0.0025 26.4 6.8 45 2-56 13-57 (352)
144 2gek_A Phosphatidylinositol ma 39.6 51 0.0017 27.4 5.8 70 107-197 275-347 (406)
145 3v8b_A Putative dehydrogenase, 39.5 67 0.0023 26.2 6.5 42 39-80 41-82 (283)
146 3dbi_A Sugar-binding transcrip 39.3 1.5E+02 0.0053 24.0 13.0 44 15-58 58-101 (338)
147 1t1j_A Hypothetical protein; s 39.3 23 0.00078 26.5 3.1 39 107-151 75-118 (125)
148 2a5l_A Trp repressor binding p 39.2 28 0.00096 26.5 3.8 33 18-53 5-37 (200)
149 3ftp_A 3-oxoacyl-[acyl-carrier 39.1 45 0.0015 27.1 5.3 42 39-80 41-82 (270)
150 2buf_A Acetylglutamate kinase; 39.0 1E+02 0.0036 25.6 7.7 43 16-59 24-69 (300)
151 3uxy_A Short-chain dehydrogena 39.0 57 0.0019 26.4 5.9 29 51-80 30-58 (266)
152 1u0t_A Inorganic polyphosphate 38.7 32 0.0011 28.9 4.4 30 50-81 77-106 (307)
153 3tov_A Glycosyl transferase fa 38.5 1.8E+02 0.0061 24.5 10.0 104 18-153 185-290 (349)
154 1ykg_A SIR-FP, sulfite reducta 38.0 11 0.00039 28.5 1.3 34 16-52 7-40 (167)
155 2gek_A Phosphatidylinositol ma 38.0 51 0.0018 27.3 5.6 38 16-53 18-55 (406)
156 3hyn_A Putative signal transdu 37.4 1.3E+02 0.0045 24.0 7.5 91 101-197 66-173 (189)
157 1ybd_A Uridylate kinase; alpha 37.4 1.5E+02 0.0052 23.4 10.7 41 115-157 126-170 (239)
158 1rq8_A Conserved hypothetical 37.2 26 0.0009 25.3 3.1 58 138-197 11-69 (104)
159 1vl1_A 6PGL, 6-phosphogluconol 37.1 99 0.0034 25.0 7.0 79 114-195 44-129 (232)
160 2c07_A 3-oxoacyl-(acyl-carrier 37.0 37 0.0012 27.6 4.4 31 19-57 45-75 (285)
161 3p0r_A Azoreductase; structura 36.6 60 0.002 25.5 5.5 38 16-53 2-42 (211)
162 3sc4_A Short chain dehydrogena 36.5 1.1E+02 0.0037 24.8 7.3 63 10-80 1-70 (285)
163 2cf5_A Atccad5, CAD, cinnamyl 36.5 1E+02 0.0035 25.9 7.4 79 51-133 183-263 (357)
164 4b7c_A Probable oxidoreductase 36.3 55 0.0019 27.2 5.5 31 51-82 152-182 (336)
165 2x0d_A WSAF; GT4 family, trans 35.9 78 0.0027 27.4 6.6 71 105-197 305-377 (413)
166 3fni_A Putative diflavin flavo 35.9 45 0.0015 25.1 4.5 31 19-52 5-35 (159)
167 4hwg_A UDP-N-acetylglucosamine 35.8 2.1E+02 0.0072 24.5 12.4 67 107-198 275-341 (385)
168 1req_B Methylmalonyl-COA mutas 35.7 67 0.0023 30.4 6.4 49 30-80 518-566 (637)
169 1bvy_F Protein (cytochrome P45 35.6 17 0.00059 28.6 2.1 33 18-53 21-53 (191)
170 3qvo_A NMRA family protein; st 35.6 1.5E+02 0.0052 22.9 11.2 73 52-127 26-101 (236)
171 3pfn_A NAD kinase; structural 35.5 82 0.0028 27.6 6.6 62 17-82 37-140 (365)
172 3b6i_A Flavoprotein WRBA; flav 35.5 29 0.001 26.3 3.4 33 18-53 1-34 (198)
173 3ged_A Short-chain dehydrogena 35.5 33 0.0011 28.2 3.8 38 39-80 15-52 (247)
174 1w6u_A 2,4-dienoyl-COA reducta 35.4 96 0.0033 25.0 6.8 72 1-80 1-81 (302)
175 3r8s_O 50S ribosomal protein L 35.3 90 0.0031 22.8 5.9 40 36-75 67-114 (116)
176 4fn4_A Short chain dehydrogena 35.2 80 0.0027 25.9 6.3 55 20-81 8-62 (254)
177 3two_A Mannitol dehydrogenase; 35.2 30 0.001 29.1 3.7 39 165-205 304-342 (348)
178 3ek2_A Enoyl-(acyl-carrier-pro 35.2 68 0.0023 25.3 5.7 67 5-80 1-69 (271)
179 1zq1_A Glutamyl-tRNA(Gln) amid 35.1 73 0.0025 28.7 6.4 50 114-165 168-222 (438)
180 1wv9_A Rhodanese homolog TT165 34.6 48 0.0016 22.2 4.1 26 19-52 54-79 (94)
181 4dzz_A Plasmid partitioning pr 34.5 53 0.0018 24.7 4.8 34 18-54 1-34 (206)
182 3fro_A GLGA glycogen synthase; 34.5 50 0.0017 27.6 5.0 37 17-53 1-38 (439)
183 4imr_A 3-oxoacyl-(acyl-carrier 34.4 1.2E+02 0.0041 24.5 7.2 42 39-80 46-87 (275)
184 4g81_D Putative hexonate dehyd 34.3 88 0.003 25.6 6.4 58 17-81 7-64 (255)
185 3se7_A VANA; alpha-beta struct 34.2 22 0.00074 30.2 2.6 37 19-55 4-40 (346)
186 2i2c_A Probable inorganic poly 34.2 39 0.0013 27.9 4.2 50 114-168 35-92 (272)
187 1jo0_A Hypothetical protein HI 34.2 24 0.00084 25.2 2.5 54 143-198 17-71 (98)
188 2xij_A Methylmalonyl-COA mutas 34.0 1.1E+02 0.0037 29.7 7.7 43 38-81 620-662 (762)
189 3ca8_A Protein YDCF; two domai 33.7 39 0.0013 28.2 4.1 37 114-155 36-73 (266)
190 3gk3_A Acetoacetyl-COA reducta 33.5 1.1E+02 0.0039 24.3 6.9 12 114-125 103-114 (269)
191 3l77_A Short-chain alcohol deh 33.4 1.1E+02 0.0037 23.6 6.6 32 18-57 2-33 (235)
192 3un1_A Probable oxidoreductase 33.3 1.8E+02 0.0062 23.1 8.8 31 50-81 29-59 (260)
193 3i4f_A 3-oxoacyl-[acyl-carrier 33.2 37 0.0013 27.0 3.8 35 15-57 4-38 (264)
194 3r6d_A NAD-dependent epimerase 33.2 91 0.0031 23.8 6.0 30 19-56 6-36 (221)
195 1o5i_A 3-oxoacyl-(acyl carrier 33.1 55 0.0019 26.0 4.8 38 12-57 13-50 (249)
196 3r5x_A D-alanine--D-alanine li 33.1 15 0.00052 30.2 1.4 39 18-56 3-41 (307)
197 4b79_A PA4098, probable short- 32.9 38 0.0013 27.8 3.8 29 51-80 13-41 (242)
198 3tfo_A Putative 3-oxoacyl-(acy 32.9 92 0.0031 25.2 6.2 43 39-81 17-59 (264)
199 2zki_A 199AA long hypothetical 32.9 57 0.0019 24.8 4.7 32 18-53 4-35 (199)
200 3r6d_A NAD-dependent epimerase 32.9 54 0.0018 25.2 4.6 71 52-125 8-84 (221)
201 3v2d_S 50S ribosomal protein L 32.7 65 0.0022 23.5 4.7 40 36-75 63-110 (112)
202 1u7z_A Coenzyme A biosynthesis 32.7 71 0.0024 26.0 5.4 20 61-80 34-54 (226)
203 1j8f_A SIRT2, sirtuin 2, isofo 32.4 2.3E+02 0.008 24.0 10.7 88 105-197 211-302 (323)
204 2nu8_A Succinyl-COA ligase [AD 32.3 1.2E+02 0.004 25.2 6.9 82 103-197 186-287 (288)
205 3oid_A Enoyl-[acyl-carrier-pro 32.2 1.1E+02 0.0036 24.5 6.4 58 15-80 1-59 (258)
206 1e3j_A NADP(H)-dependent ketos 32.2 2.2E+02 0.0075 23.7 9.5 30 51-82 171-200 (352)
207 3k5i_A Phosphoribosyl-aminoimi 32.0 2.4E+02 0.0083 24.2 9.5 17 179-195 176-192 (403)
208 4fn4_A Short chain dehydrogena 31.8 39 0.0013 27.8 3.7 30 50-80 8-37 (254)
209 3pk0_A Short-chain dehydrogena 31.7 1.5E+02 0.005 23.6 7.3 19 39-57 23-41 (262)
210 1z0s_A Probable inorganic poly 31.6 49 0.0017 27.9 4.4 53 19-82 30-99 (278)
211 3r6w_A FMN-dependent NADH-azor 31.6 71 0.0024 24.8 5.2 32 18-49 1-32 (212)
212 3lyu_A Putative hydrogenase; t 31.6 27 0.00093 25.8 2.5 35 42-76 99-133 (142)
213 1yb1_A 17-beta-hydroxysteroid 31.6 1E+02 0.0035 24.6 6.3 71 2-80 15-85 (272)
214 3rkr_A Short chain oxidoreduct 31.5 1.3E+02 0.0046 23.8 7.0 42 39-80 42-83 (262)
215 3edm_A Short chain dehydrogena 31.3 1.3E+02 0.0043 23.9 6.8 54 19-80 9-63 (259)
216 3r1i_A Short-chain type dehydr 31.0 1.4E+02 0.0048 24.1 7.1 42 39-80 45-86 (276)
217 2k0z_A Uncharacterized protein 30.9 90 0.0031 21.5 5.2 34 16-57 54-89 (110)
218 3tb6_A Arabinose metabolism tr 30.9 1.9E+02 0.0065 22.6 11.9 37 19-57 16-52 (298)
219 2csu_A 457AA long hypothetical 30.9 1.9E+02 0.0064 25.7 8.4 130 50-197 295-445 (457)
220 3ic5_A Putative saccharopine d 30.9 1.2E+02 0.0041 20.2 7.4 13 112-124 67-79 (118)
221 3uf0_A Short-chain dehydrogena 30.8 1.8E+02 0.0062 23.3 7.7 54 19-81 32-85 (273)
222 4fu0_A D-alanine--D-alanine li 30.8 28 0.00094 29.7 2.7 36 19-54 4-39 (357)
223 3ot5_A UDP-N-acetylglucosamine 30.7 2.6E+02 0.0087 24.0 9.5 34 19-57 28-65 (403)
224 2vzf_A NADH-dependent FMN redu 30.6 72 0.0025 24.5 5.0 35 18-53 2-37 (197)
225 1mvl_A PPC decarboxylase athal 30.6 19 0.00065 29.2 1.5 88 111-198 93-198 (209)
226 3orf_A Dihydropteridine reduct 30.5 60 0.002 25.8 4.6 12 185-196 212-223 (251)
227 3m6i_A L-arabinitol 4-dehydrog 30.4 1.9E+02 0.0066 24.1 8.1 31 50-82 181-212 (363)
228 4fgs_A Probable dehydrogenase 30.2 47 0.0016 27.7 4.0 52 20-81 30-81 (273)
229 3uog_A Alcohol dehydrogenase; 30.2 1.3E+02 0.0043 25.4 6.9 80 51-134 192-276 (363)
230 1xky_A Dihydrodipicolinate syn 30.2 2.1E+02 0.0071 23.9 8.2 67 18-85 47-118 (301)
231 2ako_A Glutamate 5-kinase; str 30.2 1.3E+02 0.0045 24.1 6.7 25 34-58 23-47 (251)
232 2wkj_A N-acetylneuraminate lya 30.2 2E+02 0.0069 24.0 8.1 39 47-85 77-117 (303)
233 3i12_A D-alanine-D-alanine lig 30.1 29 0.00098 29.8 2.7 37 19-55 4-40 (364)
234 4gkb_A 3-oxoacyl-[acyl-carrier 30.1 48 0.0016 27.2 4.0 54 20-81 8-61 (258)
235 3cpr_A Dihydrodipicolinate syn 30.0 2.4E+02 0.0082 23.5 9.0 67 18-85 51-122 (304)
236 3mwd_B ATP-citrate synthase; A 30.0 59 0.002 28.1 4.7 18 180-197 298-315 (334)
237 2bkx_A Glucosamine-6-phosphate 30.0 2E+02 0.0068 22.7 7.7 80 115-195 28-118 (242)
238 3is3_A 17BETA-hydroxysteroid d 30.0 1.1E+02 0.0037 24.5 6.1 43 39-81 31-74 (270)
239 2hcy_A Alcohol dehydrogenase 1 30.0 96 0.0033 25.9 6.0 31 51-82 172-202 (347)
240 1p0f_A NADP-dependent alcohol 29.8 1.3E+02 0.0045 25.3 6.9 81 51-134 194-281 (373)
241 3ucx_A Short chain dehydrogena 29.8 1.5E+02 0.005 23.6 6.9 54 19-80 12-65 (264)
242 2lnd_A De novo designed protei 29.8 1.2E+02 0.004 21.2 5.3 51 143-198 50-100 (112)
243 3guy_A Short-chain dehydrogena 29.6 55 0.0019 25.5 4.2 32 18-57 1-32 (230)
244 3d7n_A Flavodoxin, WRBA-like p 29.5 17 0.00058 28.2 1.1 32 17-51 5-36 (193)
245 1f0k_A MURG, UDP-N-acetylgluco 29.5 44 0.0015 27.5 3.7 32 19-54 7-38 (364)
246 4hp8_A 2-deoxy-D-gluconate 3-d 29.4 2.3E+02 0.0079 23.1 8.2 59 16-83 6-64 (247)
247 2ehh_A DHDPS, dihydrodipicolin 29.4 2.4E+02 0.0081 23.3 8.4 68 17-85 34-106 (294)
248 3k31_A Enoyl-(acyl-carrier-pro 29.2 1.4E+02 0.0048 24.3 6.8 71 1-78 9-84 (296)
249 1nup_A FKSG76; NAD biosynthesi 29.2 91 0.0031 25.4 5.6 37 15-51 2-38 (252)
250 3pm6_A Putative fructose-bisph 29.1 2.7E+02 0.0092 23.8 11.0 105 23-135 117-240 (306)
251 3s8m_A Enoyl-ACP reductase; ro 29.1 42 0.0014 30.1 3.7 29 51-80 63-92 (422)
252 2an1_A Putative kinase; struct 29.1 94 0.0032 25.5 5.7 36 111-152 60-95 (292)
253 3e5n_A D-alanine-D-alanine lig 29.0 31 0.001 30.1 2.7 38 18-55 22-59 (386)
254 3ea0_A ATPase, para family; al 29.0 61 0.0021 25.2 4.3 36 16-54 2-38 (245)
255 3iwh_A Rhodanese-like domain p 28.9 84 0.0029 21.8 4.7 32 16-55 54-85 (103)
256 3u5t_A 3-oxoacyl-[acyl-carrier 28.9 1.4E+02 0.0049 23.9 6.7 69 5-80 13-82 (267)
257 3guy_A Short-chain dehydrogena 28.9 48 0.0016 25.8 3.7 30 51-81 3-32 (230)
258 3l6e_A Oxidoreductase, short-c 28.9 50 0.0017 26.0 3.8 19 39-57 16-34 (235)
259 4h15_A Short chain alcohol deh 28.7 42 0.0014 27.5 3.4 28 52-80 14-41 (261)
260 2jah_A Clavulanic acid dehydro 28.7 1.5E+02 0.005 23.3 6.7 54 19-80 8-61 (247)
261 1yo6_A Putative carbonyl reduc 28.6 1.9E+02 0.0067 22.0 8.0 28 52-80 6-35 (250)
262 3oig_A Enoyl-[acyl-carrier-pro 28.6 2.1E+02 0.0073 22.4 9.7 19 39-57 22-40 (266)
263 3r3s_A Oxidoreductase; structu 28.5 2.3E+02 0.008 22.9 9.0 104 19-141 50-163 (294)
264 3h7a_A Short chain dehydrogena 28.3 51 0.0017 26.3 3.8 30 50-80 8-37 (252)
265 1req_A Methylmalonyl-COA mutas 28.3 1.3E+02 0.0044 29.0 7.1 43 38-81 612-654 (727)
266 2yxg_A DHDPS, dihydrodipicolin 28.2 2.3E+02 0.0079 23.3 8.1 68 17-85 34-106 (289)
267 2hpv_A FMN-dependent NADH-azor 28.1 98 0.0033 23.7 5.4 33 18-50 1-34 (208)
268 3l6u_A ABC-type sugar transpor 28.1 2.2E+02 0.0074 22.3 12.7 38 16-55 6-43 (293)
269 3oml_A GH14720P, peroxisomal m 28.1 1.2E+02 0.004 28.0 6.7 67 6-79 6-81 (613)
270 3bbo_Q Ribosomal protein L18; 27.8 29 0.00098 27.2 2.1 39 37-75 113-159 (161)
271 3g5j_A Putative ATP/GTP bindin 27.7 1E+02 0.0034 21.5 5.0 27 19-53 90-117 (134)
272 3vtz_A Glucose 1-dehydrogenase 27.7 56 0.0019 26.4 4.0 32 17-56 13-44 (269)
273 2qv7_A Diacylglycerol kinase D 27.7 30 0.001 29.4 2.4 34 115-152 81-114 (337)
274 3k9g_A PF-32 protein; ssgcid, 27.7 76 0.0026 25.2 4.8 34 16-53 25-58 (267)
275 1xg5_A ARPG836; short chain de 27.5 1.3E+02 0.0046 23.9 6.3 71 2-80 14-88 (279)
276 4hp8_A 2-deoxy-D-gluconate 3-d 27.5 47 0.0016 27.4 3.5 29 51-80 11-39 (247)
277 3tsc_A Putative oxidoreductase 27.5 53 0.0018 26.4 3.8 30 19-56 12-41 (277)
278 4da9_A Short-chain dehydrogena 27.4 2.4E+02 0.0082 22.6 8.3 42 39-80 42-84 (280)
279 2ij9_A Uridylate kinase; struc 27.4 48 0.0016 26.1 3.4 49 106-157 93-143 (219)
280 3orf_A Dihydropteridine reduct 27.3 55 0.0019 26.0 3.8 28 52-80 25-52 (251)
281 3ksm_A ABC-type sugar transpor 27.3 1.1E+02 0.0037 23.7 5.6 37 111-152 55-92 (276)
282 3e8x_A Putative NAD-dependent 27.3 75 0.0026 24.6 4.6 41 6-54 9-49 (236)
283 3dii_A Short-chain dehydrogena 27.2 55 0.0019 25.9 3.8 11 114-124 75-85 (247)
284 2dkn_A 3-alpha-hydroxysteroid 27.2 73 0.0025 24.7 4.5 29 18-54 1-29 (255)
285 3grk_A Enoyl-(acyl-carrier-pro 27.2 1.3E+02 0.0045 24.5 6.3 72 1-80 9-86 (293)
286 3qy9_A DHPR, dihydrodipicolina 27.0 57 0.002 26.7 3.9 28 18-54 3-30 (243)
287 2iuy_A Avigt4, glycosyltransfe 27.0 1.3E+02 0.0046 24.2 6.3 69 108-197 225-306 (342)
288 3rwb_A TPLDH, pyridoxal 4-dehy 27.0 56 0.0019 25.9 3.8 51 19-80 7-57 (247)
289 2yxb_A Coenzyme B12-dependent 26.8 1.3E+02 0.0045 22.6 5.8 59 18-81 18-76 (161)
290 3ou5_A Serine hydroxymethyltra 26.7 29 0.001 31.9 2.2 40 39-78 344-393 (490)
291 1t5b_A Acyl carrier protein ph 26.7 81 0.0028 23.7 4.6 33 18-50 1-33 (201)
292 1uuf_A YAHK, zinc-type alcohol 26.7 1.2E+02 0.004 25.8 6.1 31 50-82 196-226 (369)
293 2q62_A ARSH; alpha/beta, flavo 26.7 77 0.0026 25.8 4.7 36 17-53 33-68 (247)
294 1dhr_A Dihydropteridine reduct 26.7 72 0.0025 25.0 4.4 16 40-55 21-36 (241)
295 3g1w_A Sugar ABC transporter; 26.7 2.4E+02 0.008 22.3 12.7 37 17-55 3-39 (305)
296 3pxx_A Carveol dehydrogenase; 26.6 57 0.0019 26.2 3.8 18 39-56 23-40 (287)
297 4fgs_A Probable dehydrogenase 26.6 1.2E+02 0.004 25.2 5.8 30 50-80 30-59 (273)
298 3u43_A Colicin-E2 immunity pro 26.6 46 0.0016 23.7 2.8 44 152-199 29-77 (94)
299 3sx2_A Putative 3-ketoacyl-(ac 26.6 57 0.0019 26.2 3.8 31 19-57 14-44 (278)
300 3eb9_A 6-phosphogluconolactona 26.5 1.5E+02 0.0051 24.4 6.5 43 112-156 33-78 (266)
301 3k3p_A D-alanine--D-alanine li 26.5 34 0.0012 29.8 2.6 42 13-55 33-74 (383)
302 1ydg_A Trp repressor binding p 26.5 99 0.0034 23.7 5.1 34 17-53 5-38 (211)
303 3o26_A Salutaridine reductase; 26.4 50 0.0017 26.6 3.5 19 39-57 25-43 (311)
304 4h3k_B RNA polymerase II subun 26.4 73 0.0025 26.0 4.3 40 13-59 20-60 (214)
305 1ehi_A LMDDL2, D-alanine:D-lac 26.4 60 0.0021 27.8 4.1 37 19-55 4-41 (377)
306 1uf9_A TT1252 protein; P-loop, 26.4 86 0.0029 23.4 4.7 35 14-56 4-38 (203)
307 3gaz_A Alcohol dehydrogenase s 26.4 1.6E+02 0.0053 24.6 6.7 38 161-198 286-323 (343)
308 3asu_A Short-chain dehydrogena 26.3 57 0.002 25.9 3.8 18 40-57 14-31 (248)
309 1f0y_A HCDH, L-3-hydroxyacyl-C 26.3 35 0.0012 28.2 2.5 34 12-54 9-42 (302)
310 4imr_A 3-oxoacyl-(acyl-carrier 26.2 47 0.0016 27.0 3.3 30 50-80 34-63 (275)
311 2bon_A Lipid kinase; DAG kinas 26.2 35 0.0012 28.9 2.5 37 113-152 81-118 (332)
312 3lyl_A 3-oxoacyl-(acyl-carrier 26.2 1.4E+02 0.0048 23.2 6.1 59 14-80 1-59 (247)
313 3lwb_A D-alanine--D-alanine li 26.1 34 0.0012 29.6 2.5 38 17-54 9-46 (373)
314 3zu3_A Putative reductase YPO4 26.1 52 0.0018 29.4 3.7 28 52-80 50-78 (405)
315 1fjh_A 3alpha-hydroxysteroid d 26.1 80 0.0027 24.7 4.6 31 18-56 1-31 (257)
316 3tqt_A D-alanine--D-alanine li 26.1 38 0.0013 29.3 2.8 37 18-54 4-40 (372)
317 2iya_A OLEI, oleandomycin glyc 26.0 65 0.0022 27.4 4.3 38 18-59 12-49 (424)
318 3jyn_A Quinone oxidoreductase; 25.9 70 0.0024 26.5 4.4 33 163-196 283-315 (325)
319 1e4e_A Vancomycin/teicoplanin 25.9 38 0.0013 28.5 2.7 37 19-55 4-40 (343)
320 2bka_A CC3, TAT-interacting pr 25.8 1E+02 0.0035 23.7 5.1 29 19-55 19-49 (242)
321 3f1l_A Uncharacterized oxidore 25.8 61 0.0021 25.7 3.8 31 19-57 13-43 (252)
322 3p19_A BFPVVD8, putative blue 25.8 61 0.0021 26.2 3.9 10 185-194 221-230 (266)
323 3rsc_A CALG2; TDP, enediyne, s 25.7 43 0.0015 28.3 3.1 40 15-58 17-56 (415)
324 3gem_A Short chain dehydrogena 25.6 61 0.0021 26.1 3.9 16 40-55 41-56 (260)
325 4eso_A Putative oxidoreductase 25.5 61 0.0021 25.9 3.8 19 39-57 21-39 (255)
326 1zmt_A Haloalcohol dehalogenas 25.5 92 0.0031 24.6 4.9 32 18-57 1-32 (254)
327 1iy8_A Levodione reductase; ox 25.5 62 0.0021 25.9 3.8 31 19-57 14-44 (267)
328 2i87_A D-alanine-D-alanine lig 25.4 31 0.0011 29.3 2.1 37 19-55 4-40 (364)
329 1zmo_A Halohydrin dehalogenase 25.4 55 0.0019 25.8 3.5 30 19-56 2-31 (244)
330 3l49_A ABC sugar (ribose) tran 25.4 96 0.0033 24.4 5.0 41 108-153 55-95 (291)
331 1vl8_A Gluconate 5-dehydrogena 25.3 1.6E+02 0.0056 23.4 6.4 31 19-57 22-52 (267)
332 3op4_A 3-oxoacyl-[acyl-carrier 25.2 54 0.0019 26.0 3.4 19 39-57 22-40 (248)
333 3uve_A Carveol dehydrogenase ( 25.1 62 0.0021 26.1 3.8 30 19-56 12-41 (286)
334 3uf0_A Short-chain dehydrogena 25.1 62 0.0021 26.2 3.8 31 50-81 32-62 (273)
335 3t7c_A Carveol dehydrogenase; 25.1 62 0.0021 26.5 3.8 31 19-57 29-59 (299)
336 3gaf_A 7-alpha-hydroxysteroid 25.1 1.3E+02 0.0046 23.8 5.8 62 11-80 5-66 (256)
337 3nyw_A Putative oxidoreductase 25.1 50 0.0017 26.3 3.2 32 18-57 7-38 (250)
338 3ijr_A Oxidoreductase, short c 25.1 2.7E+02 0.0092 22.4 8.9 12 114-125 125-136 (291)
339 2htm_A Thiazole biosynthesis p 25.0 3.1E+02 0.01 23.0 9.0 92 39-152 113-208 (268)
340 4g81_D Putative hexonate dehyd 25.0 46 0.0016 27.4 3.0 29 51-80 11-39 (255)
341 3vtz_A Glucose 1-dehydrogenase 25.0 54 0.0019 26.5 3.4 30 50-80 15-44 (269)
342 3v2g_A 3-oxoacyl-[acyl-carrier 25.0 63 0.0022 26.2 3.8 42 39-80 44-86 (271)
343 3zv4_A CIS-2,3-dihydrobiphenyl 24.9 63 0.0022 26.2 3.8 39 39-80 18-56 (281)
344 4da9_A Short-chain dehydrogena 24.9 63 0.0022 26.2 3.8 30 50-80 30-59 (280)
345 2iuy_A Avigt4, glycosyltransfe 24.9 1.2E+02 0.0042 24.5 5.7 37 18-54 3-51 (342)
346 2ew8_A (S)-1-phenylethanol deh 24.8 65 0.0022 25.5 3.8 31 19-57 8-38 (249)
347 4e6p_A Probable sorbitol dehyd 24.8 65 0.0022 25.6 3.8 51 19-80 9-59 (259)
348 1fjh_A 3alpha-hydroxysteroid d 24.8 65 0.0022 25.3 3.8 28 52-80 4-31 (257)
349 4iiu_A 3-oxoacyl-[acyl-carrier 24.8 2.6E+02 0.0087 22.0 8.2 17 39-55 39-55 (267)
350 3hr4_A Nitric oxide synthase, 24.8 45 0.0016 27.0 2.9 31 18-52 40-70 (219)
351 3lhi_A Putative 6-phosphogluco 24.7 1.1E+02 0.0038 24.6 5.3 44 110-156 29-72 (232)
352 3ucx_A Short chain dehydrogena 24.7 82 0.0028 25.2 4.5 30 50-80 12-41 (264)
353 3qvo_A NMRA family protein; st 24.5 58 0.002 25.4 3.5 32 17-56 22-54 (236)
354 1hdc_A 3-alpha, 20 beta-hydrox 24.5 66 0.0023 25.5 3.8 31 19-57 6-36 (254)
355 3lrx_A Putative hydrogenase; a 24.5 67 0.0023 24.0 3.6 35 42-76 104-138 (158)
356 4fs3_A Enoyl-[acyl-carrier-pro 24.5 2.2E+02 0.0076 22.6 7.1 60 14-80 1-63 (256)
357 3fwz_A Inner membrane protein 24.4 82 0.0028 22.6 4.0 74 49-125 7-82 (140)
358 3k1y_A Oxidoreductase; structu 24.4 1.2E+02 0.0041 23.6 5.3 28 16-44 9-36 (191)
359 3v2h_A D-beta-hydroxybutyrate 24.2 66 0.0023 26.1 3.8 42 39-80 38-81 (281)
360 3iev_A GTP-binding protein ERA 24.2 2.3E+02 0.0078 23.3 7.3 91 108-204 86-187 (308)
361 3pxx_A Carveol dehydrogenase; 24.2 1.2E+02 0.0042 24.1 5.5 29 51-80 12-40 (287)
362 2yv2_A Succinyl-COA synthetase 24.2 2.4E+02 0.0081 23.5 7.4 89 103-197 193-295 (297)
363 2ekp_A 2-deoxy-D-gluconate 3-d 24.2 69 0.0024 25.1 3.8 31 19-57 3-33 (239)
364 3ppi_A 3-hydroxyacyl-COA dehyd 24.1 72 0.0025 25.6 4.0 19 39-57 43-61 (281)
365 3fkq_A NTRC-like two-domain pr 24.1 1.1E+02 0.0036 26.2 5.3 37 16-55 141-177 (373)
366 2o2s_A Enoyl-acyl carrier redu 24.0 83 0.0028 25.9 4.5 17 40-56 25-41 (315)
367 2fz5_A Flavodoxin; alpha/beta 24.0 63 0.0022 22.7 3.3 29 22-53 3-31 (137)
368 1yt5_A Inorganic polyphosphate 24.0 43 0.0015 27.4 2.6 32 114-152 41-72 (258)
369 3hn6_A Glucosamine-6-phosphate 24.0 1E+02 0.0034 25.9 5.0 78 117-195 56-144 (289)
370 3fwy_A Light-independent proto 24.0 1E+02 0.0035 26.0 5.1 42 9-54 39-80 (314)
371 2nwq_A Probable short-chain de 24.0 66 0.0023 26.1 3.8 18 40-57 35-52 (272)
372 3u7i_A FMN-dependent NADH-azor 24.0 1.4E+02 0.0047 23.7 5.7 34 16-49 2-37 (223)
373 2ojp_A DHDPS, dihydrodipicolin 23.9 2.3E+02 0.0078 23.4 7.2 67 18-85 36-107 (292)
374 3afo_A NADH kinase POS5; alpha 23.9 1.4E+02 0.0048 26.2 6.1 31 16-49 39-69 (388)
375 1dhr_A Dihydropteridine reduct 23.9 67 0.0023 25.2 3.7 30 50-80 8-37 (241)
376 3lf2_A Short chain oxidoreduct 23.9 68 0.0023 25.6 3.8 19 39-57 21-39 (265)
377 3gvc_A Oxidoreductase, probabl 23.9 69 0.0024 26.0 3.9 19 39-57 42-60 (277)
378 2r8w_A AGR_C_1641P; APC7498, d 23.9 2.3E+02 0.008 24.0 7.4 13 39-51 57-69 (332)
379 3f9i_A 3-oxoacyl-[acyl-carrier 23.9 61 0.0021 25.4 3.5 33 17-57 13-45 (249)
380 2dtx_A Glucose 1-dehydrogenase 23.8 69 0.0024 25.7 3.8 15 40-54 22-36 (264)
381 3tl3_A Short-chain type dehydr 23.8 61 0.0021 25.7 3.5 19 39-57 22-40 (257)
382 1uls_A Putative 3-oxoacyl-acyl 23.8 70 0.0024 25.2 3.8 31 19-57 6-36 (245)
383 3t7c_A Carveol dehydrogenase; 23.8 1.8E+02 0.0062 23.6 6.5 30 50-80 29-58 (299)
384 3v2g_A 3-oxoacyl-[acyl-carrier 23.8 2.5E+02 0.0087 22.4 7.4 30 50-80 32-61 (271)
385 2v9d_A YAGE; dihydrodipicolini 23.7 2.8E+02 0.0094 23.7 7.9 31 51-81 101-133 (343)
386 3edm_A Short chain dehydrogena 23.7 70 0.0024 25.5 3.8 30 50-80 9-38 (259)
387 3v8b_A Putative dehydrogenase, 23.7 69 0.0023 26.1 3.8 30 50-80 29-58 (283)
388 1vim_A Hypothetical protein AF 23.6 2.5E+02 0.0084 21.4 8.1 40 8-53 37-76 (200)
389 3sju_A Keto reductase; short-c 23.6 74 0.0025 25.8 4.0 32 48-80 23-54 (279)
390 3m9w_A D-xylose-binding peripl 23.6 1.2E+02 0.0041 24.3 5.3 36 19-56 3-38 (313)
391 2b4q_A Rhamnolipids biosynthes 23.6 69 0.0024 25.9 3.8 31 19-57 30-60 (276)
392 1to3_A Putative aldolase YIHT; 23.5 3.3E+02 0.011 22.8 9.4 104 20-136 126-241 (304)
393 3ijr_A Oxidoreductase, short c 23.5 69 0.0024 26.2 3.8 55 19-81 48-103 (291)
394 3tfo_A Putative 3-oxoacyl-(acy 23.4 65 0.0022 26.1 3.6 30 50-80 5-34 (264)
395 2ag5_A DHRS6, dehydrogenase/re 23.4 62 0.0021 25.5 3.4 19 39-57 19-37 (246)
396 3s55_A Putative short-chain de 23.3 71 0.0024 25.7 3.8 31 19-57 11-41 (281)
397 8abp_A L-arabinose-binding pro 23.2 1.3E+02 0.0046 23.7 5.5 38 110-152 53-90 (306)
398 3tzq_B Short-chain type dehydr 23.2 72 0.0024 25.7 3.8 19 39-57 24-42 (271)
399 2ae2_A Protein (tropinone redu 23.2 2.4E+02 0.0082 22.1 7.0 31 19-57 10-40 (260)
400 3a28_C L-2.3-butanediol dehydr 23.2 65 0.0022 25.6 3.5 54 19-80 3-58 (258)
401 3ai3_A NADPH-sorbose reductase 23.2 73 0.0025 25.3 3.8 31 19-57 8-38 (263)
402 3e03_A Short chain dehydrogena 23.1 72 0.0025 25.7 3.8 42 39-80 19-67 (274)
403 3f9i_A 3-oxoacyl-[acyl-carrier 23.1 58 0.002 25.6 3.2 30 50-80 15-44 (249)
404 3pgx_A Carveol dehydrogenase; 23.1 72 0.0025 25.7 3.8 56 19-82 16-84 (280)
405 1zmt_A Haloalcohol dehalogenas 23.1 64 0.0022 25.6 3.5 28 52-80 4-31 (254)
406 1zem_A Xylitol dehydrogenase; 23.1 2.1E+02 0.0071 22.5 6.7 61 12-80 1-61 (262)
407 1tq1_A AT5G66040, senescence-a 23.0 1.1E+02 0.0037 21.7 4.5 29 16-52 80-108 (129)
408 3ak4_A NADH-dependent quinucli 23.0 74 0.0025 25.3 3.8 31 19-57 13-43 (263)
409 4gx0_A TRKA domain protein; me 23.0 3.7E+02 0.013 23.9 9.0 99 41-150 341-441 (565)
410 2qq5_A DHRS1, dehydrogenase/re 23.0 64 0.0022 25.7 3.4 42 39-80 18-59 (260)
411 1geg_A Acetoin reductase; SDR 22.9 2.1E+02 0.0071 22.4 6.6 54 19-80 3-56 (256)
412 3svt_A Short-chain type dehydr 22.9 73 0.0025 25.7 3.8 32 18-57 11-42 (281)
413 3a28_C L-2.3-butanediol dehydr 22.9 2.3E+02 0.0078 22.2 6.8 29 51-80 4-32 (258)
414 1bvy_F Protein (cytochrome P45 22.9 33 0.0011 26.9 1.6 17 36-52 121-137 (191)
415 4dqx_A Probable oxidoreductase 22.9 73 0.0025 25.9 3.8 39 39-80 40-78 (277)
416 3ksu_A 3-oxoacyl-acyl carrier 22.9 63 0.0021 25.9 3.4 54 19-81 12-69 (262)
417 2gdz_A NAD+-dependent 15-hydro 22.9 74 0.0025 25.3 3.8 31 19-57 8-38 (267)
418 2ae2_A Protein (tropinone redu 22.9 75 0.0025 25.2 3.8 29 51-80 11-39 (260)
419 1vl8_A Gluconate 5-dehydrogena 22.8 74 0.0025 25.6 3.8 30 50-80 22-51 (267)
420 1f6k_A N-acetylneuraminate lya 22.8 2.4E+02 0.0081 23.3 7.1 67 18-85 39-110 (293)
421 3oig_A Enoyl-[acyl-carrier-pro 22.8 95 0.0033 24.6 4.5 30 51-80 9-39 (266)
422 1o5i_A 3-oxoacyl-(acyl carrier 22.7 75 0.0026 25.2 3.8 30 50-80 20-49 (249)
423 3huu_A Transcription regulator 22.7 2.9E+02 0.0098 21.9 12.2 46 14-59 18-66 (305)
424 1yde_A Retinal dehydrogenase/r 22.7 74 0.0025 25.6 3.8 31 19-57 10-40 (270)
425 3ftp_A 3-oxoacyl-[acyl-carrier 22.7 61 0.0021 26.2 3.3 30 50-80 29-58 (270)
426 1o5k_A DHDPS, dihydrodipicolin 22.7 2.2E+02 0.0075 23.8 6.9 67 18-85 47-118 (306)
427 3ioy_A Short-chain dehydrogena 22.7 89 0.003 25.9 4.4 56 19-82 9-66 (319)
428 2d1y_A Hypothetical protein TT 22.7 76 0.0026 25.2 3.8 31 19-57 7-37 (256)
429 4amg_A Snogd; transferase, pol 22.6 53 0.0018 27.4 3.0 60 14-83 18-77 (400)
430 3orq_A N5-carboxyaminoimidazol 22.6 1.6E+02 0.0055 25.0 6.2 29 53-83 16-44 (377)
431 3i1j_A Oxidoreductase, short c 22.6 63 0.0022 25.2 3.3 19 39-57 27-45 (247)
432 2v5h_A Acetylglutamate kinase; 22.5 1E+02 0.0034 26.2 4.8 48 109-158 181-236 (321)
433 1gmx_A GLPE protein; transfera 22.5 1.3E+02 0.0044 20.4 4.6 29 16-52 56-84 (108)
434 2a4k_A 3-oxoacyl-[acyl carrier 22.5 76 0.0026 25.5 3.8 31 19-57 7-37 (263)
435 1mxh_A Pteridine reductase 2; 22.5 62 0.0021 25.9 3.3 19 39-57 24-42 (276)
436 5nul_A Flavodoxin; electron tr 22.5 35 0.0012 24.4 1.6 29 143-171 78-108 (138)
437 3rpe_A MDAB, modulator of drug 22.4 1.3E+02 0.0044 24.1 5.2 42 12-53 19-63 (218)
438 3rot_A ABC sugar transporter, 22.4 1.1E+02 0.0037 24.4 4.8 38 110-152 57-94 (297)
439 1u0t_A Inorganic polyphosphate 22.4 1.1E+02 0.0036 25.7 4.9 123 18-171 4-133 (307)
440 3pk0_A Short-chain dehydrogena 22.3 63 0.0022 25.9 3.3 29 51-80 12-40 (262)
441 3u7r_A NADPH-dependent FMN red 22.3 73 0.0025 24.9 3.6 43 107-152 60-112 (190)
442 3q9l_A Septum site-determining 22.3 1.4E+02 0.0047 23.3 5.3 34 19-55 3-36 (260)
443 1sqs_A Conserved hypothetical 22.3 1.4E+02 0.0049 23.5 5.4 35 18-53 1-36 (242)
444 3a5f_A Dihydrodipicolinate syn 22.3 2.6E+02 0.0089 23.1 7.3 68 17-85 35-107 (291)
445 3grp_A 3-oxoacyl-(acyl carrier 22.3 2E+02 0.0068 22.9 6.4 70 1-80 9-78 (266)
446 3gbv_A Putative LACI-family tr 22.3 93 0.0032 24.6 4.3 37 111-152 66-102 (304)
447 3icc_A Putative 3-oxoacyl-(acy 22.2 2.6E+02 0.009 21.5 7.0 56 17-80 6-62 (255)
448 1qxn_A SUD, sulfide dehydrogen 22.2 72 0.0025 23.2 3.3 29 16-52 80-108 (137)
449 4fc7_A Peroxisomal 2,4-dienoyl 22.2 71 0.0024 25.8 3.6 31 19-57 28-58 (277)
450 3m1a_A Putative dehydrogenase; 22.2 64 0.0022 25.9 3.3 19 39-57 18-36 (281)
451 2ap9_A NAG kinase, acetylgluta 22.2 98 0.0034 25.7 4.6 47 109-157 163-217 (299)
452 2z1n_A Dehydrogenase; reductas 22.2 78 0.0027 25.1 3.8 31 19-57 8-38 (260)
453 1z9d_A Uridylate kinase, UK, U 22.2 3E+02 0.01 21.9 14.7 47 109-157 121-171 (252)
454 4a2c_A Galactitol-1-phosphate 22.1 2.1E+02 0.0073 23.5 6.7 28 51-80 163-191 (346)
455 3n74_A 3-ketoacyl-(acyl-carrie 22.1 79 0.0027 24.9 3.8 32 18-57 9-40 (261)
456 1g0o_A Trihydroxynaphthalene r 22.1 64 0.0022 26.1 3.3 42 39-80 42-84 (283)
457 1xu9_A Corticosteroid 11-beta- 22.1 67 0.0023 25.9 3.4 19 39-57 41-59 (286)
458 3rd5_A Mypaa.01249.C; ssgcid, 22.1 77 0.0026 25.7 3.8 51 19-80 17-67 (291)
459 3r1i_A Short-chain type dehydr 22.1 77 0.0026 25.7 3.8 31 50-81 33-63 (276)
460 3ioy_A Short-chain dehydrogena 22.1 2.2E+02 0.0076 23.4 6.8 29 51-80 10-38 (319)
461 3imf_A Short chain dehydrogena 22.1 1.2E+02 0.0042 23.9 5.0 19 39-57 19-37 (257)
462 3imf_A Short chain dehydrogena 22.1 65 0.0022 25.7 3.3 29 51-80 8-36 (257)
463 2zat_A Dehydrogenase/reductase 22.1 68 0.0023 25.4 3.4 42 39-80 27-68 (260)
464 3l77_A Short-chain alcohol deh 22.0 82 0.0028 24.4 3.8 29 51-80 4-32 (235)
465 3is3_A 17BETA-hydroxysteroid d 21.9 68 0.0023 25.7 3.4 30 50-80 19-48 (270)
466 3flh_A Uncharacterized protein 21.9 1.9E+02 0.0063 20.3 5.5 32 16-53 69-100 (124)
467 2hy7_A Glucuronosyltransferase 21.9 99 0.0034 26.4 4.7 41 106-152 276-323 (406)
468 1xjc_A MOBB protein homolog; s 21.9 1.5E+02 0.0053 22.6 5.4 34 16-53 2-35 (169)
469 3ruf_A WBGU; rossmann fold, UD 21.9 1.6E+02 0.0053 24.1 5.8 31 17-55 24-54 (351)
470 1ooe_A Dihydropteridine reduct 21.9 67 0.0023 25.0 3.3 29 51-80 5-33 (236)
471 3h2s_A Putative NADH-flavin re 21.8 67 0.0023 24.4 3.2 16 40-55 14-29 (224)
472 2rhc_B Actinorhodin polyketide 21.8 79 0.0027 25.5 3.8 55 19-81 23-77 (277)
473 3ew7_A LMO0794 protein; Q8Y8U8 21.7 74 0.0025 24.0 3.5 30 20-57 2-31 (221)
474 3of5_A Dethiobiotin synthetase 21.7 1.3E+02 0.0043 24.0 5.0 37 16-55 2-38 (228)
475 3qiv_A Short-chain dehydrogena 21.7 82 0.0028 24.7 3.8 30 50-80 10-39 (253)
476 3ia7_A CALG4; glycosysltransfe 21.7 90 0.0031 25.9 4.3 54 18-80 4-57 (402)
477 2c20_A UDP-glucose 4-epimerase 21.6 1E+02 0.0035 25.0 4.5 29 18-54 1-29 (330)
478 3pgx_A Carveol dehydrogenase; 21.6 3E+02 0.01 21.8 8.5 30 50-80 16-45 (280)
479 3e15_A Glucose-6-phosphate 1-d 21.6 91 0.0031 26.7 4.3 41 115-156 60-101 (312)
480 1ae1_A Tropinone reductase-I; 21.6 2.5E+02 0.0085 22.3 6.9 31 19-57 22-52 (273)
481 1geg_A Acetoin reductase; SDR 21.6 82 0.0028 24.9 3.8 29 51-80 4-32 (256)
482 3tpc_A Short chain alcohol deh 21.5 2.9E+02 0.01 21.5 10.8 29 51-80 9-37 (257)
483 3mcu_A Dipicolinate synthase, 21.4 1.5E+02 0.005 23.8 5.3 83 112-196 82-181 (207)
484 1fs5_A Glucosamine-6-phosphate 21.4 3E+02 0.01 22.1 7.3 40 116-156 34-75 (266)
485 1kam_A Deamido-NAD(+), nicotin 21.3 84 0.0029 24.2 3.7 28 15-42 3-30 (194)
486 3flu_A DHDPS, dihydrodipicolin 21.3 3.5E+02 0.012 22.3 8.2 68 17-85 41-113 (297)
487 2pd6_A Estradiol 17-beta-dehyd 21.3 84 0.0029 24.6 3.8 31 19-57 8-38 (264)
488 3i4f_A 3-oxoacyl-[acyl-carrier 21.3 69 0.0024 25.3 3.3 29 51-80 9-37 (264)
489 2r7k_A 5-formaminoimidazole-4- 21.2 1.6E+02 0.0055 25.4 5.9 49 53-104 22-70 (361)
490 1nff_A Putative oxidoreductase 21.2 84 0.0029 25.1 3.8 31 19-57 8-38 (260)
491 4axs_A Carbamate kinase; oxido 21.2 53 0.0018 28.4 2.7 43 17-59 23-72 (332)
492 2va1_A Uridylate kinase; UMPK, 21.2 3.2E+02 0.011 21.9 14.0 46 110-157 138-187 (256)
493 2eih_A Alcohol dehydrogenase; 21.2 3.5E+02 0.012 22.3 7.9 31 51-82 169-199 (343)
494 2nm0_A Probable 3-oxacyl-(acyl 21.2 84 0.0029 25.1 3.8 11 184-194 218-228 (253)
495 3n74_A 3-ketoacyl-(acyl-carrie 21.1 2.9E+02 0.01 21.4 9.0 30 50-80 10-39 (261)
496 3bfj_A 1,3-propanediol oxidore 21.1 1.3E+02 0.0046 25.8 5.4 14 112-125 90-103 (387)
497 2ogx_B Molybdenum storage prot 21.1 96 0.0033 25.5 4.2 30 126-157 167-196 (270)
498 3uug_A Multiple sugar-binding 21.0 3.2E+02 0.011 21.8 12.6 35 18-54 3-37 (330)
499 1uzm_A 3-oxoacyl-[acyl-carrier 21.0 71 0.0024 25.3 3.3 15 40-54 29-43 (247)
500 1ae1_A Tropinone reductase-I; 21.0 85 0.0029 25.2 3.8 30 50-80 22-51 (273)
No 1
>3sbx_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: AMP; 2.50A {Mycobacterium marinum M}
Probab=100.00 E-value=1e-56 Score=371.63 Aligned_cols=175 Identities=33% Similarity=0.558 Sum_probs=169.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCcee
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEV 98 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~ 98 (211)
++|||||||+ +.++.|++.|++||++||++|++||||||+.|+|+|+++||+++||+||||+|..+...+.+++.++++
T Consensus 14 ~~I~Vfg~s~-~~~~~~~~~A~~lg~~la~~g~~lv~GGG~~GlM~a~~~ga~~~GG~viGv~p~~l~~~e~~~~~~~~~ 92 (189)
T 3sbx_A 14 WTVAVYCAAA-PTHPELLELAGAVGAAIAARGWTLVWGGGHVSAMGAVSSAARAHGGWTVGVIPKMLVHRELADHDADEL 92 (189)
T ss_dssp CEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHTTTCCEEEEEETTTTTTTTBCTTCSEE
T ss_pred eEEEEEEeCC-CCChHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEcCchhhhcccCCCCCCee
Confidence 6999999999 889999999999999999999999999999999999999999999999999999877778888888999
Q ss_pred eecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCccccc
Q 028256 99 KAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARY 178 (211)
Q Consensus 99 ~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~ 178 (211)
+.+++|++||.+|+++|||||+||||+|||+|+||+|+|.|+|.|+|||+|+|.+|||+++++|+++|+++|||++++.+
T Consensus 93 i~~~~~~~Rk~~m~~~sda~IalPGG~GTLdElfe~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~~~~~ 172 (189)
T 3sbx_A 93 VVTETMWERKQVMEDRANAFITLPGGVGTLDELLDVWTEGYLGMHDKSIVVLDPWGHFDGLRAWLSELADTGYVSRTAME 172 (189)
T ss_dssp EEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTCTTHHHHHHHHHHHHTTSSCHHHHH
T ss_pred EEcCCHHHHHHHHHHHCCEEEEeCCCcchHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCHHHcC
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ceEEcCCHHHHHHHhh
Q 028256 179 IIVSAQTAHELICKLE 194 (211)
Q Consensus 179 ~i~~~~d~ee~~~~l~ 194 (211)
.+.+++|++|+++.|+
T Consensus 173 ~i~~~d~~ee~~~~l~ 188 (189)
T 3sbx_A 173 RLIVVDNLDDALQACA 188 (189)
T ss_dssp HEEEESSHHHHHHHHC
T ss_pred eEEEeCCHHHHHHHhc
Confidence 9999999999999885
No 2
>1ydh_A AT5G11950; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG; 2.15A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4d_A
Probab=100.00 E-value=2e-56 Score=376.93 Aligned_cols=186 Identities=65% Similarity=1.123 Sum_probs=177.1
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDT 94 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~ 94 (211)
.++|++|||||||+.+.++.|++.|++||++||++|++||||||+.|+|+|+++||+++||.||||+|+.+.++|..++.
T Consensus 6 ~~~m~~V~V~ggsr~~~~~~~~~~A~~lg~~LA~~g~~lV~GGg~~GlM~aa~~gA~~~GG~~iGv~p~~l~~~e~~~~~ 85 (216)
T 1ydh_A 6 RSRFRKICVFCGSHSGHREVFSDAAIELGNELVKRKIDLVYGGGSVGLMGLISRRVYEGGLHVLGIIPKALMPIEISGET 85 (216)
T ss_dssp CCSCSEEEEECCSCCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEEGGGHHHHCCSSC
T ss_pred CCCCCeEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEECCCcccHhHHHHHHHHHcCCcEEEEechhcCccccccCC
Confidence 46788999999999988999999999999999999999999999889999999999999999999999988888888899
Q ss_pred CceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCc
Q 028256 95 VGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAP 174 (211)
Q Consensus 95 ~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~ 174 (211)
+++++++++|++||++|++.||+||++|||+|||+|+||+|+|.|++.|+|||+|+|.+|||+++++|+++|+++|||++
T Consensus 86 ~~~~~~~~~~~~Rk~~~~~~sda~I~lpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~gfw~~l~~~l~~~~~~Gfi~~ 165 (216)
T 1ydh_A 86 VGDVRVVADMHERKAAMAQEAEAFIALPGGYGTMEELLEMITWSQLGIHKKTVGLLNVDGYYNNLLALFDTGVEEGFIKP 165 (216)
T ss_dssp CSEEEEESSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHHHTSCCCEEEEECGGGTTHHHHHHHHHHHHTTSSCH
T ss_pred CCcccccCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhcccCCCEEEecCCccchHHHHHHHHHHHCCCCCh
Confidence 99999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEcCCHHHHHHHhhhhccCc
Q 028256 175 AARYIIVSAQTAHELICKLEVFFFFF 200 (211)
Q Consensus 175 ~~~~~i~~~~d~ee~~~~l~~~~~~~ 200 (211)
++.+.+.+++|++|+++.|++|++..
T Consensus 166 ~~~~~~~~~d~~ee~~~~l~~~~~~~ 191 (216)
T 1ydh_A 166 GARNIVVSAPTAKELMEKMEEYTPSH 191 (216)
T ss_dssp HHHTTEEEESSHHHHHHHHHHCC---
T ss_pred HHcCeEEEeCCHHHHHHHHHHhcccc
Confidence 99999999999999999999887644
No 3
>3qua_A Putative uncharacterized protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.10A {Mycobacterium smegmatis str}
Probab=100.00 E-value=5.5e-56 Score=369.84 Aligned_cols=179 Identities=38% Similarity=0.619 Sum_probs=171.0
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDT 94 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~ 94 (211)
.+.+++|||||||+ +.++.|++.|++||++||++|+.||||||+.|+|+|+++||+++||+||||+|..+...+.+++.
T Consensus 19 ~~~~~~v~Vfggs~-~~~~~~~~~A~~lg~~La~~g~~lV~GGG~~GlM~a~~~gA~~~GG~viGv~p~~l~~~e~~~~~ 97 (199)
T 3qua_A 19 QDRQWAVCVYCASG-PTHPELLELAAEVGSSIAARGWTLVSGGGNVSAMGAVAQAARAKGGHTVGVIPKALVHRELADVD 97 (199)
T ss_dssp --CCCEEEEECCSS-CCCHHHHHHHHHHHHHHHHTTCEEEECCBCSHHHHHHHHHHHHTTCCEEEEEEGGGTTTTTBCTT
T ss_pred cCCCCEEEEEECCC-CCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHHHHHHHHHHHcCCcEEEEeCchhhhccccCCC
Confidence 34568999999999 88999999999999999999999999999889999999999999999999999987777888888
Q ss_pred CceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCc
Q 028256 95 VGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAP 174 (211)
Q Consensus 95 ~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~ 174 (211)
+++++++++|++||.+|+++|||||+||||+|||+|+|++|+|.|+|+|+|||+|+|.+|||+++++|+++|+++|||++
T Consensus 98 ~~~~i~~~~~~~Rk~~m~~~sda~IalPGG~GTldEl~e~lt~~qlg~~~kPvvlln~~gfw~~l~~~l~~~~~~Gfi~~ 177 (199)
T 3qua_A 98 AAELIVTDTMRERKREMEHRSDAFIALPGGIGTLEEFFEAWTAGYLGMHDKPLILLDPFGHYDGLLTWLRGLVPTGYVSQ 177 (199)
T ss_dssp SSEEEEESSHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECTTSTTHHHHHHHHHTTTTTSSCH
T ss_pred CCeeEEcCCHHHHHHHHHHhcCccEEeCCCccHHHHHHHHHHHHHhccCCCCEEEEcCCccchHHHHHHHHHHHCCCCCH
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred ccccceEEcCCHHHHHHHhh
Q 028256 175 AARYIIVSAQTAHELICKLE 194 (211)
Q Consensus 175 ~~~~~i~~~~d~ee~~~~l~ 194 (211)
++.+.+.+++|++|+++.|+
T Consensus 178 ~~~~~i~~~d~~~e~~~~l~ 197 (199)
T 3qua_A 178 RAMDSLVVVDNVEAALEACA 197 (199)
T ss_dssp HHHHTSEEESSHHHHHHHHS
T ss_pred HHCCeEEEeCCHHHHHHHHh
Confidence 99999999999999999986
No 4
>2a33_A Hypothetical protein; structural genomics, protein structure initiative, center for eukaryotic structural genomics, CESG, AT2G37210; 1.95A {Arabidopsis thaliana} SCOP: c.129.1.1 PDB: 2q4o_A
Probab=100.00 E-value=1.9e-55 Score=370.80 Aligned_cols=190 Identities=78% Similarity=1.217 Sum_probs=169.3
Q ss_pred hhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC
Q 028256 12 AALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT 91 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~ 91 (211)
....++|++|||||||+.++++.|++.|++||+.||++|++||||||+.|+|+|+++||+++||.||||+|..+.+.+..
T Consensus 7 ~~~~~~m~~IaV~cGS~~~~~~~y~~~A~~lg~~LA~~G~~vVsGGg~~GiM~aa~~gAl~~GG~tiGVlP~~~~~~e~~ 86 (215)
T 2a33_A 7 SMQKSKFRRICVFCGSSQGKKSSYQDAAVDLGNELVSRNIDLVYGGGSIGLMGLVSQAVHDGGRHVIGIIPKTLMPRELT 86 (215)
T ss_dssp -CCCCSCSEEEEECCSSCCSSHHHHHHHHHHHHHHHHTTCEEEECCCSSHHHHHHHHHHHHTTCCEEEEEESSCC-----
T ss_pred ccccCCCCeEEEEECCCCCCchHHHHHHHHHHHHHHHCCCEEEECCChhhHhHHHHHHHHHcCCcEEEEcchHhcchhhc
Confidence 34567888999999999988888999999999999999999999999889999999999999999999999988777777
Q ss_pred CCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCC
Q 028256 92 GDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGF 171 (211)
Q Consensus 92 ~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~ 171 (211)
++.+++++++++|++||++|++.||+||++|||+|||+|+||+|+|.|+|.|+|||+|+|.+|||++|++|+++++++||
T Consensus 87 ~~~~~~~~~~~~f~~Rk~~~~~~sda~VvlpGG~GTLdElfE~lt~~qlg~~~kPvvll~~~g~w~~l~~~l~~~~~~Gf 166 (215)
T 2a33_A 87 GETVGEVRAVADMHQRKAEMAKHSDAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVEEGF 166 (215)
T ss_dssp ---CCEEEEESSHHHHHHHHHHTCSEEEECSCCHHHHHHHHHHHHHHHTTSCCCCEEEECGGGTTHHHHHHHHHHHHHTS
T ss_pred cCCCCceeecCCHHHHHHHHHHhCCEEEEeCCCCchHHHHHHHHHHHHhCCCCCCeEEecCcchhHHHHHHHHHHHHcCC
Confidence 77888999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred CCcccccceEEcCCHHHHHHHhhhhccCce
Q 028256 172 IAPAARYIIVSAQTAHELICKLEVFFFFFF 201 (211)
Q Consensus 172 i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~ 201 (211)
|++++.+.+.+++|++|+++.|++|+++..
T Consensus 167 i~~~~~~~~~~~d~~ee~~~~l~~~~~~~~ 196 (215)
T 2a33_A 167 ISPTAREIIVSAPTAKELVKKLEEYAPCHE 196 (215)
T ss_dssp SCHHHHTTEEEESSHHHHHHHHHC------
T ss_pred CCHHHCCeEEEeCCHHHHHHHHHHhcCccc
Confidence 999999999999999999999999886553
No 5
>1t35_A Hypothetical protein YVDD, putative lysine decarboxylase; structural genomics target, NYSGXRC, PSI, protein structure initiative; 2.72A {Bacillus subtilis} SCOP: c.129.1.1
Probab=100.00 E-value=9.6e-56 Score=366.51 Aligned_cols=183 Identities=41% Similarity=0.830 Sum_probs=172.2
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCce
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGE 97 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~ 97 (211)
|++|||||||+.+.++.|++.|++||++||++|++||||||+.|+|+|+++||+++||.||||+|..+.+.+.+++.+++
T Consensus 1 m~~V~V~gss~~~~~~~~~~~A~~lg~~La~~g~~lV~GGg~~GiM~aa~~gA~~~gG~~iGv~p~~l~~~e~~~~~~~~ 80 (191)
T 1t35_A 1 MKTICVFAGSNPGGNEAYKRKAAELGVYMAEQGIGLVYGGSRVGLMGTIADAIMENGGTAIGVMPSGLFSGEVVHQNLTE 80 (191)
T ss_dssp CCEEEEECCSSCCSSTHHHHHHHHHHHHHHHTTCEEEECCCCSHHHHHHHHHHHTTTCCEEEEEETTCCHHHHTTCCCSE
T ss_pred CCEEEEEECCCCCCChHHHHHHHHHHHHHHHCCCEEEECCCcccHHHHHHHHHHHcCCeEEEEeCchhcccccccCCCCc
Confidence 56899999999888899999999999999999999999999889999999999999999999999987777777778888
Q ss_pred eeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccc
Q 028256 98 VKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAAR 177 (211)
Q Consensus 98 ~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~ 177 (211)
.+++.+|++||++|++.||+||++|||+|||+|+|++|+|.|+|+|+|||+|+|.+|||+++++|+++|+++|||++++.
T Consensus 81 ~~~~~~~~~Rk~~~~~~sda~IvlPGG~GTl~El~e~lt~~q~g~~~kPvvll~~~g~~~~l~~~l~~~~~~Gfi~~~~~ 160 (191)
T 1t35_A 81 LIEVNGMHERKAKMSELADGFISMPGGFGTYEELFEVLCWAQIGIHQKPIGLYNVNGYFEPMMKMVKYSIQEGFSNESHL 160 (191)
T ss_dssp EEEESHHHHHHHHHHHHCSEEEECSCCHHHHHHHHHHHHTTSCSSCCCCEEEECGGGTTHHHHHHHHHHHHTTSSCTTHH
T ss_pred cccCCCHHHHHHHHHHHCCEEEEeCCCccHHHHHHHHHHHHHhCCCCCCEEEecCCcccchHHHHHHHHHHCCCCCHHHc
Confidence 89999999999999999999999999999999999999999999999999999999999999999999999999999999
Q ss_pred cceEEcCCHHHHHHHhhhhccCc
Q 028256 178 YIIVSAQTAHELICKLEVFFFFF 200 (211)
Q Consensus 178 ~~i~~~~d~ee~~~~l~~~~~~~ 200 (211)
+.+.+++|++|+++.|++|.++.
T Consensus 161 ~~~~~~~~~~e~~~~l~~~~~~~ 183 (191)
T 1t35_A 161 KLIHSSSRPDELIEQMQNYSYPI 183 (191)
T ss_dssp HHEEEESSHHHHHHHHHTC----
T ss_pred CeEEEeCCHHHHHHHHHHhcCCc
Confidence 99999999999999999988655
No 6
>1wek_A Hypothetical protein TT1465; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; 2.20A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=6.2e-50 Score=337.56 Aligned_cols=179 Identities=27% Similarity=0.386 Sum_probs=162.3
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCce
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGE 97 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~ 97 (211)
+++|||||||+.++++.|++.|++||+.||++|++||||||+ |+|+|+++||+++||.||||+|.. ...+.+++.+++
T Consensus 37 ~~~VaV~Gss~~~~~~~~~~~A~~lg~~La~~g~~lVsGGg~-GiM~aa~~gAl~~gG~~iGV~~~~-P~~~~~~~~~t~ 114 (217)
T 1wek_A 37 VPLVSVFGSARFGEGHPAYEAGYRLGRALAEAGFGVVTGGGP-GVMEAVNRGAYEAGGVSVGLNIEL-PHEQKPNPYQTH 114 (217)
T ss_dssp SCEEEEECCSSCCTTSHHHHHHHHHHHHHHHHTCEEEECSCS-HHHHHHHHHHHHTTCCEEEEEECC-TTCCCCCSCCSE
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCCEEEEeeCC-cchhhccccCCc
Confidence 368999999999888899999999999999999999999995 999999999999999999997652 223455666778
Q ss_pred eeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCC-CCCcEEEEeCCccchhHHHHHHHHHHcCCCCccc
Q 028256 98 VKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAA 176 (211)
Q Consensus 98 ~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~ 176 (211)
.+.+.+|++||++|++.||+||++|||+|||+|++++|+|.|+|+ ++|||+++|. +||+++++|+++++++||+++++
T Consensus 115 ~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~El~e~lt~~qlg~~~~kPvvll~~-~~w~~l~~~l~~~~~~Gfi~~~~ 193 (217)
T 1wek_A 115 ALSLRYFFVRKVLFVRYAVGFVFLPGGFGTLDELSEVLVLLQTEKVHRFPVFLLDR-GYWEGLVRWLAFLRDQKAVGPED 193 (217)
T ss_dssp EEEESCHHHHHHHHHHTEEEEEECSCCHHHHHHHHHHHHHHHTTSSCCCCEEEECH-HHHHHHHHHHHHHHHTTSSCTTG
T ss_pred CcccCCHHHHHHHHHHhCCEEEEeCCCCcHHHHHHHHHHHHhhCCCCCCCEEEeCc-ccchhHHHHHHHHHHCCCCCHHH
Confidence 888999999999999999999999999999999999999999997 6799999998 69999999999999999999999
Q ss_pred ccceEEcCCHHHHHHHhhhhccC
Q 028256 177 RYIIVSAQTAHELICKLEVFFFF 199 (211)
Q Consensus 177 ~~~i~~~~d~ee~~~~l~~~~~~ 199 (211)
.+.+.+++|++|+++.|++++++
T Consensus 194 ~~~~~~~~~~~e~~~~l~~~~~~ 216 (217)
T 1wek_A 194 LQLFRLTDEPEEVVQALKAEAPP 216 (217)
T ss_dssp GGGSEEESCHHHHHHHHHC----
T ss_pred cCeEEEeCCHHHHHHHHHHhcCC
Confidence 99999999999999999998764
No 7
>1weh_A Conserved hypothetical protein TT1887; rossman fold, structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.80A {Thermus thermophilus} SCOP: c.129.1.1
Probab=100.00 E-value=1.4e-49 Score=324.24 Aligned_cols=168 Identities=24% Similarity=0.329 Sum_probs=156.9
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCC-CCCCCCc
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPRE-ITGDTVG 96 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e-~~~~~~~ 96 (211)
|++|||||||+.++++.|++.|++||+.||++|++||||||+ |+|+++++||+++||+||||+|..++|.| .+++.++
T Consensus 1 m~~V~V~gs~~~~~~~~~~~~A~~lg~~La~~g~~lV~Ggg~-GiM~aa~~gAl~~gG~tiGV~~~~~~p~e~~~~~~~~ 79 (171)
T 1weh_A 1 MRLLAVFVSSRLSPEDPLYARWVRYGEVLAEEGFGLACGGYQ-GGMEALARGVKAKGGLVVGVTAPAFFPERRGPNPFVD 79 (171)
T ss_dssp CEEEEEECCSSCCTTSHHHHHHHHHHHHHHHTTEEEEECCSS-THHHHHHHHHHHTTCCEEECCCGGGCTTSCSSCTTCS
T ss_pred CCEEEEEeCCCCCCCcHHHHHHHHHHHHHHHCCCEEEeCChh-hHHHHHHHHHHHcCCcEEEEeccccCcccccccCCCc
Confidence 568999999998888899999999999999999999999998 99999999999999999999998766766 4566677
Q ss_pred eeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCC-CCCcEEEEeCCccchhHHHHHHHHHHcCCCCcc
Q 028256 97 EVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPA 175 (211)
Q Consensus 97 ~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~ 175 (211)
+.+.+.+|++||++|++.||+||++|||+|||+|+|++|+|.|+|+ ++|| +|+| |||++++ +++||++++
T Consensus 80 ~~~~~~~f~~Rk~~~~~~sda~ivlpGG~GTl~El~e~lt~~q~g~~~~kP-vll~--g~~~~l~------~~~gfi~~~ 150 (171)
T 1weh_A 80 LELPAATLPQRIGRLLDLGAGYLALPGGVGTLAELVLAWNLLYLRRGVGRP-LAVD--PYWLGLL------KAHGEIAPE 150 (171)
T ss_dssp EECCCSSHHHHHHHHHHHEEEEEECSCCHHHHHHHHHHHHHHHTCSSCSCC-EEEC--GGGGGTC------CCBTTBCHH
T ss_pred eeeecCCHHHHHHHHHHhCCEEEEeCCCccHHHHHHHHHHHHHhCccCCCe-EEEC--cchhhhH------hhcCCCChh
Confidence 8888999999999999999999999999999999999999999998 6899 9999 8999987 688999999
Q ss_pred cccceEEcCCHHHHHHHhhh
Q 028256 176 ARYIIVSAQTAHELICKLEV 195 (211)
Q Consensus 176 ~~~~i~~~~d~ee~~~~l~~ 195 (211)
+.+.+.+++||+|+++.|++
T Consensus 151 ~~~~~~~~~~~~e~~~~l~~ 170 (171)
T 1weh_A 151 DVGLLRVVADEEDLRRFLRS 170 (171)
T ss_dssp HHTTSEECCSHHHHHHHHHT
T ss_pred hcCeEEEeCCHHHHHHHHHh
Confidence 99999999999999999875
No 8
>3gh1_A Predicted nucleotide-binding protein; structural genomics, protein structure initiative; 1.90A {Vibrio cholerae o1 biovar el tor str} PDB: 2pmb_A
Probab=100.00 E-value=7.5e-47 Score=342.88 Aligned_cols=180 Identities=21% Similarity=0.282 Sum_probs=163.9
Q ss_pred hhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhc-------CCeEEEEecCcC
Q 028256 13 ALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDG-------GRHVLGVIPKTL 85 (211)
Q Consensus 13 ~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~-------gG~viGv~P~~~ 85 (211)
..+.+.++|||||||+.. ++.|++.|++||++||++|++||||||+ |+|+++++||..+ ||.||||+|..+
T Consensus 141 ~~p~r~~~IvV~cGSs~~-~p~yye~A~eLGr~LA~~G~~LVtGGG~-GLMeAa~aGA~~a~a~qr~aGG~vIGIiP~~L 218 (462)
T 3gh1_A 141 LIPGATPNLVVCWGGHSI-NEVEYQYTREVGHELGLRELNICTGCGP-GAMEGPMKGAAVGHAKQRYSEYRYLGLTEPSI 218 (462)
T ss_dssp CCTTCCSCEEEEECCSSC-CHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCTTCCEEEEECTTT
T ss_pred cCCCCCCCEEEEECCCCC-CHHHHHHHHHHHHHHHHCCCEEEeCCcH-HHHHHHHHHHHHhccccccCCCeEEEEccchh
Confidence 345678899999999984 8899999999999999999999999995 9999999999886 999999999887
Q ss_pred CCCCCCCCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhC---CCCCcEEEEeC---CccchhH
Q 028256 86 MPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLG---IHDKPVGLLNV---DGYYNSL 159 (211)
Q Consensus 86 ~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg---~~~kPiill~~---~g~~~~l 159 (211)
...|.+++.+++++++++|++||.+|++.|||||+||||+|||+|+||+|+|.|++ .++|||+|+|. +|||+++
T Consensus 219 ~~~E~~N~~vteliiv~~m~~RK~~mv~~SDAfIaLPGG~GTLEELfE~LTw~qLgtgk~h~kPIVLln~~~~~gYwd~L 298 (462)
T 3gh1_A 219 IAAEPPNPIVNELVIMPDIEKRLEAFVRMAHGIIIFPGGPGTAEELLYILGIMMHPENADQPMPIVLTGPKQSEAYFRSL 298 (462)
T ss_dssp TTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHH
T ss_pred hhhhccCCCCCeeEEeCCHHHHHHHHHHHCCEEEEcCCCcchHHHHHHHHHHHhcccCcCCCCCEEEEcCCCcccHHHHH
Confidence 77788888889999999999999999999999999999999999999999999988 68899999998 7999999
Q ss_pred HHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhcc
Q 028256 160 LSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 160 ~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
++|+++++.++ .....+.+++|++|+++.|+++++
T Consensus 299 l~fL~~~v~eg----~~~~~~iv~DdpeEvl~~i~~~~~ 333 (462)
T 3gh1_A 299 DKFITDTLGEA----ARKHYSIAIDNPAEAARIMSNAMP 333 (462)
T ss_dssp HHHHHHHHCGG----GGGGCEEEESCHHHHHHHHHHHHH
T ss_pred HHHHHHHhhhh----hhhccEEEcCCHHHHHHHHHHHHH
Confidence 99999988765 344567899999999999998864
No 9
>1rcu_A Conserved hypothetical protein VT76; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.50A {Thermotoga maritima} SCOP: c.129.1.1
Probab=100.00 E-value=3.9e-45 Score=303.65 Aligned_cols=170 Identities=26% Similarity=0.388 Sum_probs=147.4
Q ss_pred hhhhcCcceEEEEeCCCCCCCH----HHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCC
Q 028256 12 AALKSRFKRVCVFCGSSPGKSP----SYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMP 87 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~~~~----~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~ 87 (211)
..+.++|++|||||||+. .++ .|++.|++||+.||++|++|||||++ |+|+|+++||+++||.||||+|...
T Consensus 17 ~~~~~~m~~IaV~Gss~~-~~~~~~~~~~~~A~~lg~~LA~~G~~vVsGg~~-GiM~aa~~gAl~~GG~~iGVlP~e~-- 92 (195)
T 1rcu_A 17 LYFQGHMKKVVVVGYSGP-VNKSPVSELRDICLELGRTLAKKGYLVFNGGRD-GVMELVSQGVREAGGTVVGILPDEE-- 92 (195)
T ss_dssp ------CCEEEEEECCSC-TTSTTTGGGHHHHHHHHHHHHHTTCEEEECCSS-HHHHHHHHHHHHTTCCEEEEESTTC--
T ss_pred CcccCCCCeEEEEecCCC-CCccccHHHHHHHHHHHHHHHHCCCEEEeCCHH-HHHHHHHHHHHHcCCcEEEEeCCcc--
Confidence 344556789999998876 444 89999999999999999999999876 9999999999999999999999731
Q ss_pred CCCCCCCCceeeec--CCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHH
Q 028256 88 REITGDTVGEVKAV--SGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDK 165 (211)
Q Consensus 88 ~e~~~~~~~~~~~~--~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~ 165 (211)
..+++.++.+. .+|++||++|++.||+||++|||+|||+|++++|+ ++|||+++|.+|||++++ +.
T Consensus 93 ---~~~~~~~~~~~~~~~f~~Rk~~m~~~sda~IvlpGG~GTL~E~~eal~------~~kPV~lln~~g~w~~~l---~~ 160 (195)
T 1rcu_A 93 ---AGNPYLSVAVKTGLDFQMRSFVLLRNADVVVSIGGEIGTAIEILGAYA------LGKPVILLRGTGGWTDRI---SQ 160 (195)
T ss_dssp ---CCCTTCSEEEECCCCHHHHHHHHHTTCSEEEEESCCHHHHHHHHHHHH------TTCCEEEETTSCHHHHHG---GG
T ss_pred ---cCCCCcceeeecCCCHHHHHHHHHHhCCEEEEecCCCcHHHHHHHHHh------cCCCEEEECCCCccHHHH---HH
Confidence 23445666665 69999999999999999999999999999999999 789999999999999864 67
Q ss_pred HHHcC-CCCcccccceEEcCCHHHHHHHhhhhc
Q 028256 166 AVDEG-FIAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 166 ~~~~g-~i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
++++| ||++++.+.+.+++|++|+++.|++|+
T Consensus 161 ~~~~G~fi~~~~~~~i~~~~~~ee~~~~l~~~~ 193 (195)
T 1rcu_A 161 VLIDGKYLDNRRIVEIHQAWTVEEAVQIIEQIL 193 (195)
T ss_dssp GCBTTTBSSTTCCSCEEEESSHHHHHHHHHTC-
T ss_pred HHHcCCcCCHHHcCeEEEeCCHHHHHHHHHHHh
Confidence 88898 999999999999999999999998875
No 10
>3bq9_A Predicted rossmann fold nucleotide-binding domain containing protein; structural genomics, PSI-2, protein structure initiative; 1.80A {Idiomarina baltica}
Probab=100.00 E-value=7e-45 Score=331.76 Aligned_cols=178 Identities=20% Similarity=0.257 Sum_probs=158.2
Q ss_pred hhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhc-------CCeEEEEecCcC
Q 028256 13 ALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDG-------GRHVLGVIPKTL 85 (211)
Q Consensus 13 ~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~-------gG~viGv~P~~~ 85 (211)
..+.++++|||||||+.+ ++.+++.|++||++||++|++||||||+ |+|+++++||..+ ||+||||+|..+
T Consensus 139 f~p~~~~~ivVv~GSs~~-~~~~Ye~A~eLGr~LA~~G~~LVtGGG~-GlMEaa~aGA~~a~s~qr~~GG~vIGIiP~~L 216 (460)
T 3bq9_A 139 LRPQEEPNMVVCWGGHSI-NEIEYKYTKDVGYHIGLRGLNICTGCGP-GAMKGPMKGATIGHAKQRVEGGRYLGLTEPGI 216 (460)
T ss_dssp CCTTCCSCEEEEECCSSC-CHHHHHHHHHHHHHHHHTTCEEEECCSS-GGGTHHHHHHHHHHHHTTCSSCCEEEEECTTT
T ss_pred ccCCCCCCEEEEEcCCCC-CCHHHHHHHHHHHHHHHCCCEEEeCCcH-HHhhHHHhhHHhhcccccCCCCEEEEEeChhh
Confidence 334567788998888887 4556699999999999999999999998 9998888888765 999999999988
Q ss_pred CCCCCCCCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCC---CCCcEEEEe---CCccchhH
Q 028256 86 MPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGI---HDKPVGLLN---VDGYYNSL 159 (211)
Q Consensus 86 ~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~---~~kPiill~---~~g~~~~l 159 (211)
.+.|.+++.+++++++++|++||..|++.|||||+||||+|||+|+|++|+|.|++. ++|||+|+| .+|||+++
T Consensus 217 ~~~E~~N~~vtelIiv~~m~eRK~~mv~~SDAfIaLPGG~GTLeELfEaLT~~QLg~~k~~~kPVVLlg~~n~~gywd~L 296 (460)
T 3bq9_A 217 IAAEPPNPIVNELVILPDIEKRLEAFVRCAHGIVIFPGGAGTAEELLYLLGILMHPDNQRQSLPVILTGPASSRDYFEAL 296 (460)
T ss_dssp TTTSCCCTTCSEEEECSSHHHHHHHHHHHCSEEEECSCSHHHHHHHHHHHHHHTSGGGTTCCCCEEEEECGGGHHHHHHH
T ss_pred hhhhhcCCCCCeEEEECCHHHHHHHHHHhCCEEEEcCCCcchHHHHHHHHHHHhhccccCCCCCEEEEecCCccchhhHH
Confidence 888888888899999999999999999999999999999999999999999999876 899999997 57999999
Q ss_pred HHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhh
Q 028256 160 LSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVF 196 (211)
Q Consensus 160 ~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~ 196 (211)
++|+++++.+ ++....+.+++||+|+++.|+++
T Consensus 297 l~~l~~~l~~----~~~~~~iiv~ddpeEal~~l~~~ 329 (460)
T 3bq9_A 297 DEFIGATIGD----EARQLYKIIIDDPAAVAQHMHAG 329 (460)
T ss_dssp HHHHHHHTCT----TGGGGCEEEESCHHHHHHHHHHH
T ss_pred HHHHHHHhcc----hhhcCcEEEeCCHHHHHHHHHHH
Confidence 9999988765 44455678899999999999764
No 11
>2iz6_A Molybdenum cofactor carrier protein; metal transport; 1.60A {Chlamydomonas reinhardtii} PDB: 2iz5_A 2iz7_A
Probab=100.00 E-value=4.5e-42 Score=281.18 Aligned_cols=165 Identities=21% Similarity=0.251 Sum_probs=145.0
Q ss_pred hhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCC
Q 028256 14 LKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGD 93 (211)
Q Consensus 14 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~ 93 (211)
+++..++||||||++.+.++.|++.|++||+.||++|++||||||..|+|++++++|+++||.||||+|.. .++.+++
T Consensus 9 ~~~~~~~VaV~Gs~~~g~~~~~~~~A~~lg~~La~~g~~lVsGGg~~Gim~aa~~gAl~~gG~tigVlP~~--~~~~~~~ 86 (176)
T 2iz6_A 9 MSGRKPIIGVMGPGKADTAENQLVMANELGKQIATHGWILLTGGRSLGVMHEAMKGAKEAGGTTIGVLPGP--DTSEISD 86 (176)
T ss_dssp --CCCCEEEEECCCGGGCCHHHHHHHHHHHHHHHHTTCEEEEECSSSSHHHHHHHHHHHTTCCEEEEECC-------CCT
T ss_pred ccCCCCeEEEEeCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCccCHhHHHHHHHHHcCCEEEEEeCch--hhhhhcc
Confidence 34666899999887767799999999999999999999999999944999999999999999999999976 3466677
Q ss_pred CCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCC
Q 028256 94 TVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA 173 (211)
Q Consensus 94 ~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~ 173 (211)
.+++++++.+|++||++|++.||+||++|||+|||+|++++|. ++|||+++|. |+ ..+||++
T Consensus 87 ~~~~~i~~~~~~~Rk~~m~~~sda~IvlpGg~GTL~E~~~al~------~~kpV~~l~~---~~---------~~~gfi~ 148 (176)
T 2iz6_A 87 AVDIPIVTGLGSARDNINALSSNVLVAVGMGPGTAAEVALALK------AKKPVVLLGT---QP---------EAEKFFT 148 (176)
T ss_dssp TCSEEEECCCCSSSCCCCGGGCSEEEEESCCHHHHHHHHHHHH------TTCCEEEESC---CH---------HHHHHHH
T ss_pred CCceeEEcCCHHHHHHHHHHhCCEEEEecCCccHHHHHHHHHH------hCCcEEEEcC---cc---------cccccCC
Confidence 7888899999999999999999999999999999999999996 7999999986 66 3557888
Q ss_pred cccccceEEcCCHHHHHHHhhhhcc
Q 028256 174 PAARYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 174 ~~~~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
++..+.+.+++||+|+++.|++++.
T Consensus 149 ~~~~~~i~~~~~~~e~~~~l~~~~~ 173 (176)
T 2iz6_A 149 SLDAGLVHVAADVAGAIAAVKQLLA 173 (176)
T ss_dssp HHCTTTEEEESSHHHHHHHHHHHHH
T ss_pred hhhcCeEEEcCCHHHHHHHHHHHHH
Confidence 8899999999999999999998864
No 12
>3maj_A DNA processing chain A; MCSG, PSI-2, structural genomics, protein structure initiati midwest center for structural genomics; HET: DNA; 2.05A {Rhodopseudomonas palustris}
Probab=99.45 E-value=2.8e-12 Score=115.62 Aligned_cols=157 Identities=13% Similarity=0.119 Sum_probs=118.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcC---CCCCCC---
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTL---MPREIT--- 91 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~---~~~e~~--- 91 (211)
.+.|+|. |||.. ++.-.+.|++|++.|+++|++||+|+.. |++.+++++|+++| +|+|++..+ +|.+..
T Consensus 127 ~~~vAIV-GsR~~-s~yG~~~a~~l~~~La~~g~~VVSGlA~-GID~~AH~~AL~~g--TIaVLg~Gld~~YP~~n~~L~ 201 (382)
T 3maj_A 127 RPMIAIV-GSRNA-SGAGLKFAGQLAADLGAAGFVVISGLAR-GIDQAAHRASLSSG--TVAVLAGGHDKIYPAEHEDLL 201 (382)
T ss_dssp SCEEEEE-CCSSC-CHHHHHHHHHHHHHHHHHTCEEEECCCT-THHHHHHHHHTTTC--EEEECSSCTTSCSSGGGHHHH
T ss_pred CceEEEE-eCCCC-CHHHHHHHHHHHHHHHHCCcEEEeCCcc-CHHHHHHHHHHhCC--eEEEECCCcCccCCHhhHHHH
Confidence 3589999 57765 5556889999999999999999999987 99999999999987 999998654 333210
Q ss_pred -----CCCC--c-----eeeecCCHHHHHHHHHHhcCEEEEecCC--cCcHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 92 -----GDTV--G-----EVKAVSGMHQRKAEMARQADAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 92 -----~~~~--~-----~~~~~~~~~~Rk~~m~~~sDa~IvlpGG--~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
.+.+ + .-....+|..||+++...||++||+-.+ .|||...-.++. .+|||+.+-. ...+
T Consensus 202 ~~I~~~~G~liSE~ppg~~p~~~~Fp~RNRiIagLS~~vvVvEA~~kSGsliTA~~Ale------~gR~VfavPG-~i~~ 274 (382)
T 3maj_A 202 LDIIQTRGAAISEMPLGHVPRGKDFPRRNRLISGASVGVAVIEAAYRSGSLITARRAAD------QGREVFAVPG-SPLD 274 (382)
T ss_dssp HHHHHTTCEEEECSCTTCCCCTTHHHHHHHHHHHHCSCEEECCCCTTCTHHHHHHHHHH------HTCCEEECCC-CTTC
T ss_pred HHHHHhCCcEEecCCCCCCCCccccHHHHHHHHHhCCceEEEecCCCCcHHHHHHHHHH------hCCcEEEEcC-CCCC
Confidence 0110 0 1112346899999999999999999877 799999988887 6899988743 2445
Q ss_pred hHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhh
Q 028256 158 SLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEV 195 (211)
Q Consensus 158 ~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~ 195 (211)
+.-.--..++.+|- ..+.+++|+++.|..
T Consensus 275 ~~s~G~n~LI~~GA---------~lv~~~~Dil~~l~~ 303 (382)
T 3maj_A 275 PRAAGTNDLIKQGA---------TLITSASDIVEAVAS 303 (382)
T ss_dssp GGGHHHHHHHHTTC---------EECSSHHHHHHHHTT
T ss_pred cccccHHHHHHCCC---------EEECCHHHHHHHhhh
Confidence 55444566777663 457899999988853
No 13
>3uqz_A DNA processing protein DPRA; SAM and rossmann fold, DNA processing protein A, DNA binding; HET: DNA SO4; 2.70A {Streptococcus pneumoniae}
Probab=99.39 E-value=1.2e-11 Score=107.60 Aligned_cols=157 Identities=17% Similarity=0.168 Sum_probs=117.4
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCC---CCCCC---
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLM---PREIT--- 91 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~---~~e~~--- 91 (211)
.+.|+|.| ||.. ++.-.+.|+++++.|+ ++++||+|+.. |+..+++++|+++||.+|+|++..+. |.+..
T Consensus 106 ~~~vaIVG-sR~~-s~yg~~~a~~l~~~La-~~~~VVSGlA~-GID~~AH~~aL~~~g~TIaVl~~Gld~~YP~~n~~L~ 181 (288)
T 3uqz_A 106 FPKVAVVG-SRAC-SKQGAKSVEKVIQGLE-NELVIVSGLAK-GIDTAAHMAALQNGGKTIAVIGTGLDVFYPKANKRLQ 181 (288)
T ss_dssp SCEEEEEE-CTTC-CHHHHHHHHHHHHTTT-TCSEEEECCCT-THHHHHHHHHHHHTCCEEEECSSCTTCCSSGGGHHHH
T ss_pred CCcEEEEc-CCCC-CHHHHHHHHHHHHHHh-hhheEecCccc-CHHHHHHHHHHhcCCCEEEEecccccccCchhhHHHH
Confidence 36899995 6764 5666789999999996 68999999987 99999999999999999999986542 32110
Q ss_pred -----------CCCCceeeecCCHHHHHHHHHHhcCEEEEecCC--cCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchh
Q 028256 92 -----------GDTVGEVKAVSGMHQRKAEMARQADAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS 158 (211)
Q Consensus 92 -----------~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG--~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~ 158 (211)
.-+...-.....|..|++++...||++||+--+ .|||.=.-.++. .+|||..+-. ...++
T Consensus 182 ~~i~~~GlliSE~ppg~~p~~~~Fp~RNRiIagLS~~~vVvEA~~~SGsliTA~~Ale------~gR~VfavPG-~i~~~ 254 (288)
T 3uqz_A 182 DYIGNDHLVLSEYGPGEQPLKFHFPARNRIIAGLCRGVIVAEAKMRSGSLITCERAME------EGRDVFAIPG-SILDG 254 (288)
T ss_dssp HHHHHHSEEEESSCTTCCCCTTHHHHHHHHHHHHCSEEEEESCCTTCHHHHHHHHHHH------TTCEEEECCC-CSSSS
T ss_pred HHhcccCcEeeccCCCCCccccccHHHHHHHHHcCCeEEEEecCCCChHHHHHHHHHH------cCCeEEEECC-CCCCc
Confidence 000111223456899999999999999999766 799887777776 7899987732 24455
Q ss_pred HHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhh
Q 028256 159 LLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLE 194 (211)
Q Consensus 159 l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~ 194 (211)
.-.--..++.+|- ..+.+++|+++.+.
T Consensus 255 ~s~G~n~LI~~GA---------~lv~~~~Dil~el~ 281 (288)
T 3uqz_A 255 LSDGCHHLIQEGA---------KLVTSGQDVLAEFE 281 (288)
T ss_dssp TTHHHHHHHHTTC---------EECSSHHHHHHHCC
T ss_pred cchHHHHHHHCCC---------EEECCHHHHHHHhC
Confidence 4444556777663 45789999998874
No 14
>3imk_A Putative molybdenum carrier protein; YP_461806.1, structural genomics, joint center for structural genomics, JCSG; HET: MSE MES PG4 PG6; 1.45A {Syntrophus aciditrophicus SB}
Probab=97.97 E-value=0.00022 Score=56.47 Aligned_cols=96 Identities=16% Similarity=0.145 Sum_probs=68.9
Q ss_pred eEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC-CCCCc-eeeecCCHHHHHHHHHHhcCEEEEec-CCc--C
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT-GDTVG-EVKAVSGMHQRKAEMARQADAFIALP-GGY--G 126 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~-~~~~~-~~~~~~~~~~Rk~~m~~~sDa~Ivlp-GG~--G 126 (211)
.||+||- .|+..|+-+.|+++|-..-|..|......+.+ +..|. ......++..|.+..++.||+.++|- |.. |
T Consensus 10 kIiSGGQ-TGvDraALd~A~~~gi~~gGwcP~GR~aEDG~ip~~Y~L~E~~~~~y~~Rt~~NV~DSDgTLI~~~g~lsGG 88 (158)
T 3imk_A 10 KIISGGQ-TGADRAALDFAIKHHIPYGGWVPKGRLAEGGRVPETYQLQEMPTSDYSKRTEKNVLDSDGTLIISHGILKGG 88 (158)
T ss_dssp EEECCCC-TTHHHHHHHHHHHTTCCEECEECGGGCCTTSSCCTTSCCEECSSCCHHHHHHHHHHTSSEEEEEESSSCCHH
T ss_pred EEeeCCc-chHHHHHHHHHHHcCCCcceecCCCcccccCCCCccccccccCCCCHHHHHHHhhhhcCeEEEEecCCCCCc
Confidence 5788886 59999999999999999899999754332211 22221 12235678999999999999977776 664 6
Q ss_pred cHHHHHHHHHHHHhCCCCCcEEEEeCCc
Q 028256 127 TLEELLEVITWAQLGIHDKPVGLLNVDG 154 (211)
Q Consensus 127 TL~El~~~~~~~~lg~~~kPiill~~~g 154 (211)
|..=+..+.. +.||+.+++.+.
T Consensus 89 T~lT~~~a~~------~~KP~l~i~l~~ 110 (158)
T 3imk_A 89 SALTEFFAEQ------YKKPCLHIDLDR 110 (158)
T ss_dssp HHHHHHHHHH------TTCCEEEEETTT
T ss_pred hHHHHHHHHH------hCCCEEEEeccc
Confidence 6544433333 799999998864
No 15
>2nx2_A Hypothetical protein YPSA; structural genomics, unknown function, PSI, protein structure initiative; 2.00A {Bacillus subtilis} SCOP: c.129.1.2
Probab=97.80 E-value=0.00097 Score=53.93 Aligned_cols=132 Identities=11% Similarity=0.115 Sum_probs=79.8
Q ss_pred CcceEEEEeCCCCCC-------CHHHHHHHHHHHHHHH---HcCC-eEEecCCCCChhHHHHHHHHh-----cCCeEEEE
Q 028256 17 RFKRVCVFCGSSPGK-------SPSYQLAAIQLGKQLV---ERNI-DLVYGGGSIGLMGLVSQAVYD-----GGRHVLGV 80 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~-------~~~~~~~A~~lG~~la---~~g~-~lv~GGg~~GlM~a~a~gA~~-----~gG~viGv 80 (211)
+|++|+|.| .+.-. +|.....-..|-+.|. +.|+ .+++||. .|+.-.+++.|++ .+.+.+-|
T Consensus 1 ~m~~i~vTG-hR~~~l~if~~~~~~~~~ik~~L~~~l~~l~~~G~~~~isgga-~G~D~~aae~vl~lk~~y~~i~L~~v 78 (181)
T 2nx2_A 1 SLKVLAITG-YKPFELGIFKQDDKALYYIKKAIKNRLIAFLDEGLEWILISGQ-LGVELWAAEAAYDLQEEYPDLKVAVI 78 (181)
T ss_dssp CCCEEEEEE-CCHHHHTCCSSCCHHHHHHHHHHHHHHHHHHTTTCCEEEECCC-TTHHHHHHHHHHTTTTTCTTCEEEEE
T ss_pred CceEEEEEe-CCCccccCccccchHHHHHHHHHHHHHHHHHhCCCcEEEECCC-ccHHHHHHHHHHHhccccCCceEEEE
Confidence 367889885 45432 4444333333433333 4685 6677776 4999999999999 45788888
Q ss_pred ecCcCCCCCCCCC----------CCceee-e-------cCCHHHHHHHHHHhcCEEEEec-CCc--CcHHHHHHHHHHHH
Q 028256 81 IPKTLMPREITGD----------TVGEVK-A-------VSGMHQRKAEMARQADAFIALP-GGY--GTLEELLEVITWAQ 139 (211)
Q Consensus 81 ~P~~~~~~e~~~~----------~~~~~~-~-------~~~~~~Rk~~m~~~sDa~Ivlp-GG~--GTL~El~~~~~~~~ 139 (211)
+|-......+... ..+.+. + ...+..|++.|+++||.+|++- |.. ||-.=+-.+-...+
T Consensus 79 ~Pf~~~~~~w~~~~~~~y~~ll~~aD~v~~l~~~~y~~~~~~~~rn~~mvd~sD~liavyDg~~~GgT~~~v~~A~~~~~ 158 (181)
T 2nx2_A 79 TPFYEQEKNWKEPNKEQYEAVLAQADYEASLTHRPYESPLQFKQKNQFFIDKSDGLLLLYDPEKEGSPKYMLGTAEKRRE 158 (181)
T ss_dssp ESSBCTTTTSCHHHHHHHHHHHHHCSEEEESSSSBCCCHHHHHHHHHHHHHHSSEEEEECCTTTCCTTHHHHHHHHHHHH
T ss_pred ecccchhhCCCHHHHHHHHHHHHhCCeEEecccCCCCCHHHHHHHHHHHHHHCCEEEEEEcCCCCCCHHHHHHHHHHhcc
Confidence 8854333222100 011111 1 1126799999999999999987 443 67654444333211
Q ss_pred hCCCCCcEEEEeC
Q 028256 140 LGIHDKPVGLLNV 152 (211)
Q Consensus 140 lg~~~kPiill~~ 152 (211)
.+++||.+++.
T Consensus 159 --~~~~pv~~I~~ 169 (181)
T 2nx2_A 159 --QDGYPIYFITM 169 (181)
T ss_dssp --HHCCCEEEECH
T ss_pred --ccCCeEEEEcH
Confidence 23799999864
No 16
>2khz_A C-MYC-responsive protein RCL; flexible loop, nucleus, phosphoprotein, nuclear protein; NMR {Rattus norvegicus} PDB: 2klh_A*
Probab=95.94 E-value=0.018 Score=45.51 Aligned_cols=81 Identities=21% Similarity=0.204 Sum_probs=53.5
Q ss_pred HHHHHHHHHHhcCEEEEecCC--cCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceE
Q 028256 104 MHQRKAEMARQADAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIV 181 (211)
Q Consensus 104 ~~~Rk~~m~~~sDa~IvlpGG--~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~ 181 (211)
...|...+++.||++|++.+. .||.-|+-.++. .+|||+++..+.- ..-++ .|+ +|.-.....+.+.
T Consensus 67 i~~~d~~~i~~aD~vva~~~~~d~Gt~~EiGyA~a------lgKPVi~l~~~~~-~~~~n---~M~-~g~~~~~~~~~~~ 135 (165)
T 2khz_A 67 IHEQDLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFRPQS-GRVLS---AMI-RGAADGSRFQVWD 135 (165)
T ss_dssp HHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TCSSEEEEECTTT-TCCCC---HHH-HHTCCSSSEEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCHHHHHHHHHH------CCCEEEEEEcCCC-CCcch---hhh-cccCccceeEEEe
Confidence 468888899999999999864 699999999998 7999999855431 11111 122 1222112233333
Q ss_pred EcCCHHHHHHHhhhhc
Q 028256 182 SAQTAHELICKLEVFF 197 (211)
Q Consensus 182 ~~~d~ee~~~~l~~~~ 197 (211)
. |.+|+.+.|.++.
T Consensus 136 -y-~~~el~~~l~~~~ 149 (165)
T 2khz_A 136 -Y-AEGEVETMLDRYF 149 (165)
T ss_dssp -C-CTTTHHHHHHHHH
T ss_pred -c-CHHHHHHHHHHHH
Confidence 4 7788888887764
No 17
>2f62_A Nucleoside 2-deoxyribosyltransferase; SGPP, structural genomics, PSI, S genomics of pathogenic protozoa consortium; HET: 12M; 1.50A {Trypanosoma brucei} SCOP: c.23.14.1 PDB: 2a0k_A* 2f2t_A* 2f64_A* 2f67_A*
Probab=95.66 E-value=0.01 Score=46.98 Aligned_cols=88 Identities=18% Similarity=0.117 Sum_probs=55.5
Q ss_pred CHHHHHHHHHHhcCEEEEe--c--C---CcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHH-HcCCC--
Q 028256 103 GMHQRKAEMARQADAFIAL--P--G---GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAV-DEGFI-- 172 (211)
Q Consensus 103 ~~~~Rk~~m~~~sDa~Ivl--p--G---G~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~-~~g~i-- 172 (211)
....+....++.||++|++ | | -.||.-|+-.+++ .+|||+++..+ + .++.+...... .+|+.
T Consensus 56 ~i~~~d~~~i~~aD~vVA~ldpf~g~~~D~GTafEiGyA~A------lgKPVi~l~~d-~-r~~~~~~~~~~d~~g~~ve 127 (161)
T 2f62_A 56 DIRQKNIQMIKDCDAVIADLSPFRGHEPDCGTAFEVGCAAA------LNKMVLTFTSD-R-RNMREKYGSGVDKDNLRVE 127 (161)
T ss_dssp HHHHHHHHHHHHCSEEEEECCCCSSSSCCHHHHHHHHHHHH------TTCEEEEECSC-C-SCHHHHHTSSBCTTSCBCC
T ss_pred HHHHHHHHHHHhCCEEEEEecCCCCCCCCCcHHHHHHHHHH------CCCEEEEEEcC-c-hhhhhhccccccccccccc
Confidence 4567888899999999999 4 3 3699999999998 79999998653 1 22211100000 01100
Q ss_pred -----Cccc-ccceEEcCCHHHHHHHhhhhcc
Q 028256 173 -----APAA-RYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 173 -----~~~~-~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
..-. ...+.+.+|.+++++.|.++..
T Consensus 128 df~~~~NLMl~~~~~~~~~~~~~l~~l~~~~~ 159 (161)
T 2f62_A 128 GFGLPFNLMLYDGVEVFDSFESAFKYFLANFP 159 (161)
T ss_dssp CSSCSSCGGGCCSSCEESSHHHHHHHHHHHSC
T ss_pred ccCCcchhhhhhhheeeCCHHHHHHHHHHhhc
Confidence 0000 0112268999999999987754
No 18
>4fyk_A Deoxyribonucleoside 5'-monophosphate N-glycosidas; hydrolas; HET: SRA; 1.79A {Rattus norvegicus} PDB: 4fyh_A* 4fyi_A* 2klh_A*
Probab=95.30 E-value=0.029 Score=44.15 Aligned_cols=83 Identities=22% Similarity=0.160 Sum_probs=53.7
Q ss_pred CHHHHHHHHHHhcCEEEEecC--CcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccce
Q 028256 103 GMHQRKAEMARQADAFIALPG--GYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYII 180 (211)
Q Consensus 103 ~~~~Rk~~m~~~sDa~IvlpG--G~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i 180 (211)
..+.|...+++.||++|+..- ..||.-|+-.++. .+|||+++.....=..+-.+++.... ..... +
T Consensus 57 ~i~~~d~~~i~~aD~vvA~l~~~d~Gt~~EiG~A~a------lgkPV~~l~~~~~~~~ls~mi~G~~~-----~~~~~-~ 124 (152)
T 4fyk_A 57 FIHEQNLNWLQQADVVVAEVTQPSLGVGYELGRAVA------LGKPILCLFRPQSGRVLSAMIRGAAD-----GSRFQ-V 124 (152)
T ss_dssp HHHHHHHHHHHHCSEEEEECSSCCHHHHHHHHHHHH------TTCCEEEEECGGGSCCCCHHHHHHCC-----SSSEE-E
T ss_pred HHHHHHHHHHHHCCEEEEeCCCCCCCHHHHHHHHHH------cCCeEEEEEeCCccchhHHHHcCCCC-----CCeEE-E
Confidence 457899999999999999854 4799999999998 69999987432111122223333321 11112 3
Q ss_pred EEcCCHHHHHHHhhhhcc
Q 028256 181 VSAQTAHELICKLEVFFF 198 (211)
Q Consensus 181 ~~~~d~ee~~~~l~~~~~ 198 (211)
.-.++ +|+.+.|.+|..
T Consensus 125 ~~Y~~-~el~~il~~f~~ 141 (152)
T 4fyk_A 125 WDYAE-GEVETMLDRYFE 141 (152)
T ss_dssp EECCT-TCHHHHHHHHHC
T ss_pred EEecH-HHHHHHHHHHHH
Confidence 44455 788888877754
No 19
>2o6l_A UDP-glucuronosyltransferase 2B7; drug metabolism, rossman, MAD, enzyme, nucleotide binding, sugar,UDP-glucuronosyltransferase, UGT; 1.80A {Homo sapiens}
Probab=95.14 E-value=0.36 Score=36.64 Aligned_cols=64 Identities=20% Similarity=0.268 Sum_probs=38.4
Q ss_pred HhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcC----CHHH
Q 028256 113 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQ----TAHE 188 (211)
Q Consensus 113 ~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~----d~ee 188 (211)
..||+||. .||.+|+.|.. . .++|++++... .+. ....+.+.+.|. -..++ |+++
T Consensus 85 ~~ad~~I~-~~G~~t~~Ea~---~------~G~P~i~~p~~--~~Q-~~na~~l~~~g~--------g~~~~~~~~~~~~ 143 (170)
T 2o6l_A 85 PKTRAFIT-HGGANGIYEAI---Y------HGIPMVGIPLF--ADQ-PDNIAHMKARGA--------AVRVDFNTMSSTD 143 (170)
T ss_dssp TTEEEEEE-CCCHHHHHHHH---H------HTCCEEECCCS--TTH-HHHHHHHHTTTS--------EEECCTTTCCHHH
T ss_pred CCcCEEEE-cCCccHHHHHH---H------cCCCEEeccch--hhH-HHHHHHHHHcCC--------eEEeccccCCHHH
Confidence 67887764 78889988875 3 58999998542 232 122233333332 11222 7888
Q ss_pred HHHHhhhhc
Q 028256 189 LICKLEVFF 197 (211)
Q Consensus 189 ~~~~l~~~~ 197 (211)
+.+.|.+..
T Consensus 144 l~~~i~~ll 152 (170)
T 2o6l_A 144 LLNALKRVI 152 (170)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 888777654
No 20
>1f8y_A Nucleoside 2-deoxyribosyltransferase; active site, alpha/beta protein, biocatalyst, X- RAY crystallography; HET: 5MD; 2.40A {Lactobacillus leichmannii} SCOP: c.23.14.1 PDB: 1f8x_A*
Probab=94.30 E-value=0.038 Score=43.48 Aligned_cols=45 Identities=18% Similarity=0.048 Sum_probs=38.6
Q ss_pred HHHHHHHHHHhcCEEEEecCC----cCcHHHHHHHHHHHHhCCCCCcEEEEeCCc
Q 028256 104 MHQRKAEMARQADAFIALPGG----YGTLEELLEVITWAQLGIHDKPVGLLNVDG 154 (211)
Q Consensus 104 ~~~Rk~~m~~~sDa~IvlpGG----~GTL~El~~~~~~~~lg~~~kPiill~~~g 154 (211)
.+.+....++.||++|++.-| .||.-|+-.+++ .+|||+++..+.
T Consensus 68 I~~~D~~~i~~aD~vvA~ldg~~~D~GT~~EiGyA~A------~gkPVv~~~~~~ 116 (157)
T 1f8y_A 68 TYNNDLNGIKTNDIMLGVYIPDEEDVGLGMELGYALS------QGKYVLLVIPDE 116 (157)
T ss_dssp HHHHHHHHHHTSSEEEEECCGGGCCHHHHHHHHHHHH------TTCEEEEEECGG
T ss_pred HHHHhHHHHHhCCEEEEEcCCCCCCccHHHHHHHHHH------CCCeEEEEEcCC
Confidence 368888899999999998755 799999999998 799999986543
No 21
>3ehd_A Uncharacterized conserved protein; PSI,MCSG,PF05014, structural genomics, protein structure INI midwest center for structural genomics; HET: MSE; 2.15A {Enterococcus faecalis}
Probab=93.85 E-value=0.23 Score=39.28 Aligned_cols=85 Identities=18% Similarity=0.147 Sum_probs=55.6
Q ss_pred CHHHHHHHHHHhcCEEEEe-cCC---cCcHHHHHHHHHHHHhCCCCCcEEEEeCCcc--chhHHHHHHHHH---H-----
Q 028256 103 GMHQRKAEMARQADAFIAL-PGG---YGTLEELLEVITWAQLGIHDKPVGLLNVDGY--YNSLLSFIDKAV---D----- 168 (211)
Q Consensus 103 ~~~~Rk~~m~~~sDa~Ivl-pGG---~GTL~El~~~~~~~~lg~~~kPiill~~~g~--~~~l~~~l~~~~---~----- 168 (211)
..+.+....++.||++|++ .|. .||.-|+-.+++ .+|||+++..+-- =+.-.+-+..+. +
T Consensus 58 ~i~~~D~~~i~~aD~viA~ldg~~~D~Gt~~EiG~A~a------~gkPVi~~~~D~R~~g~~~~~~~~~~~~~~e~~f~~ 131 (162)
T 3ehd_A 58 MIALADTENVLASDLLVALLDGPTIDAGVASEIGVAYA------KGIPVVALYTDSRQQGADNHQKLDALNEIAENQFHY 131 (162)
T ss_dssp HHHHHHHHHHHTCSEEEEECCSSSCCHHHHHHHHHHHH------TTCCEEEECCCGGGCCTTCHHHHHHTTSTTCCCSCC
T ss_pred HHHHHHHHHHHHCCEEEEECCCCCCCCCHHHHHHHHHH------CCCEEEEEEcCcccccCCcchhhhhhHHHhhhhhhh
Confidence 3577888889999998886 554 799999999998 7899999966411 011111111111 0
Q ss_pred -----cCCCCcccccceEEcCCHHHHHHHhhhhc
Q 028256 169 -----EGFIAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 169 -----~g~i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
.|.|. ..=.+++|.+|+++.|+++.
T Consensus 132 ~N~~~~G~i~----~~g~~~~~~~~~~~~l~~~~ 161 (162)
T 3ehd_A 132 LNLYTVGLIK----LNGRVVSSEEDLLEEIKQRL 161 (162)
T ss_dssp CCHHHHHHHH----TTEEEESSHHHHHHHHHHTC
T ss_pred hhHHHhhhHH----hCCeEEeCHHHHHHHHHHHh
Confidence 01111 12366799999999998874
No 22
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=92.23 E-value=3.8 Score=34.76 Aligned_cols=32 Identities=19% Similarity=0.127 Sum_probs=24.6
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
++..||+||. .||.||+.|.. . .++|++++..
T Consensus 276 ~l~~~d~~v~-~~G~~t~~Ea~---~------~G~P~v~~p~ 307 (384)
T 2p6p_A 276 VAPTCDLLVH-HAGGVSTLTGL---S------AGVPQLLIPK 307 (384)
T ss_dssp HGGGCSEEEE-CSCTTHHHHHH---H------TTCCEEECCC
T ss_pred HHhhCCEEEe-CCcHHHHHHHH---H------hCCCEEEccC
Confidence 4588997775 78889977664 4 7999999864
No 23
>2jzc_A UDP-N-acetylglucosamine transferase subunit ALG13; rossmann-like fold, endoplasmic reticulum, glycosyltransferase, structural genomics; NMR {Saccharomyces cerevisiae} PDB: 2ks6_A
Probab=92.21 E-value=0.85 Score=37.65 Aligned_cols=52 Identities=25% Similarity=0.340 Sum_probs=33.5
Q ss_pred HHH-hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-ccchhHHHHHHHHHHcCCC
Q 028256 111 MAR-QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-GYYNSLLSFIDKAVDEGFI 172 (211)
Q Consensus 111 m~~-~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-g~~~~l~~~l~~~~~~g~i 172 (211)
++. .||+ ||--||.||+.|+.. .++|.+++-.. -..++=....+.+.+.|..
T Consensus 128 ~l~~~Adl-vIshaGagTv~Eal~---------~G~P~IvVP~~~~~~~HQ~~nA~~l~~~G~~ 181 (224)
T 2jzc_A 128 IIRDYSDL-VISHAGTGSILDSLR---------LNKPLIVCVNDSLMDNHQQQIADKFVELGYV 181 (224)
T ss_dssp HHHHHCSC-EEESSCHHHHHHHHH---------TTCCCCEECCSSCCCCHHHHHHHHHHHHSCC
T ss_pred HHHhcCCE-EEECCcHHHHHHHHH---------hCCCEEEEcCcccccchHHHHHHHHHHCCCE
Confidence 456 8895 455699999888863 68999998432 1234333334566666664
No 24
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=92.10 E-value=2.1 Score=36.53 Aligned_cols=33 Identities=21% Similarity=0.190 Sum_probs=24.5
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.++..||+|| .+||.+|+.|.+ . .++|++++..
T Consensus 304 ~~l~~ad~~v-~~~g~~t~~Ea~---a------~G~P~v~~p~ 336 (412)
T 3otg_A 304 ALLPHVDLVV-HHGGSGTTLGAL---G------AGVPQLSFPW 336 (412)
T ss_dssp HHGGGCSEEE-ESCCHHHHHHHH---H------HTCCEEECCC
T ss_pred HHHhcCcEEE-ECCchHHHHHHH---H------hCCCEEecCC
Confidence 4667899766 788888876654 4 5899998754
No 25
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=90.70 E-value=3.4 Score=35.41 Aligned_cols=32 Identities=31% Similarity=0.454 Sum_probs=23.8
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
.++..||++ |..||.||+.|.. . .++|++++-
T Consensus 309 ~ll~~ad~~-v~~~G~~t~~Ea~---~------~G~P~v~~p 340 (415)
T 3rsc_A 309 KVLEQATVC-VTHGGMGTLMEAL---Y------WGRPLVVVP 340 (415)
T ss_dssp HHHHHEEEE-EESCCHHHHHHHH---H------TTCCEEECC
T ss_pred HHHhhCCEE-EECCcHHHHHHHH---H------hCCCEEEeC
Confidence 456779974 5678889977664 4 789999873
No 26
>1s2d_A Purine trans deoxyribosylase; ribosylate intermediate, PTD, ARAA, transferase; HET: AR4 ADE; 2.10A {Lactobacillus helveticus} SCOP: c.23.14.1 PDB: 1s2g_A* 1s2i_A* 1s2l_A 1s3f_A*
Probab=90.47 E-value=0.4 Score=37.92 Aligned_cols=42 Identities=19% Similarity=0.017 Sum_probs=35.6
Q ss_pred HHHHHHHHHHhcCEEEEe-c---CCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 104 MHQRKAEMARQADAFIAL-P---GGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 104 ~~~Rk~~m~~~sDa~Ivl-p---GG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
...+....++.||++|++ . =-.||.-|+-.+++ .+|||+++.
T Consensus 71 I~~~D~~~i~~aD~vVA~ldg~~~D~GTa~EiGyA~a------lgKPVv~l~ 116 (167)
T 1s2d_A 71 TYQNDLTGISNATCGVFLYDMDQLDDGSAFXIGFMRA------MHKPVILVP 116 (167)
T ss_dssp HHHHHHHHHHHCSEEEEEEESSSCCHHHHHHHHHHHH------TTCCEEEEE
T ss_pred HHHHHHHHHHhCCEEEEECCCCCCCCCceeehhhHhh------CCCeEEEEE
Confidence 467888889999999986 2 24799999999998 789999995
No 27
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=90.06 E-value=4.5 Score=34.90 Aligned_cols=67 Identities=21% Similarity=0.172 Sum_probs=39.4
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEc---CCHH
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA---QTAH 187 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~---~d~e 187 (211)
++..||+|| ..||.||+.|.. . +++|++++... .+. ....+.+.+.|.- +.+. -+++
T Consensus 318 ~l~~~d~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~~--~dQ-~~na~~l~~~g~g-------~~~~~~~~~~~ 377 (424)
T 2iya_A 318 ILTKASAFI-THAGMGSTMEAL---S------NAVPMVAVPQI--AEQ-TMNAERIVELGLG-------RHIPRDQVTAE 377 (424)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCCS--HHH-HHHHHHHHHTTSE-------EECCGGGCCHH
T ss_pred HHhhCCEEE-ECCchhHHHHHH---H------cCCCEEEecCc--cch-HHHHHHHHHCCCE-------EEcCcCCCCHH
Confidence 567899755 578889977765 3 78999997542 222 1222334443321 1111 2777
Q ss_pred HHHHHhhhhc
Q 028256 188 ELICKLEVFF 197 (211)
Q Consensus 188 e~~~~l~~~~ 197 (211)
++.+.|.+..
T Consensus 378 ~l~~~i~~ll 387 (424)
T 2iya_A 378 KLREAVLAVA 387 (424)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 8777776654
No 28
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=89.80 E-value=1.8 Score=37.42 Aligned_cols=102 Identities=22% Similarity=0.146 Sum_probs=56.3
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHH-HcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLV-ERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGD 93 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la-~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~ 93 (211)
....+.|.|++||. +... ..+...+.-..+. +.++.++..+|. +-.+...+...+.+..+. |.|
T Consensus 177 ~~~~~~ilv~gGs~-g~~~-~~~~~~~al~~l~~~~~~~vi~~~G~-~~~~~~~~~~~~~~~~~~-v~~----------- 241 (365)
T 3s2u_A 177 TGRRVNLLVLGGSL-GAEP-LNKLLPEALAQVPLEIRPAIRHQAGR-QHAEITAERYRTVAVEAD-VAP----------- 241 (365)
T ss_dssp TTSCCEEEECCTTT-TCSH-HHHHHHHHHHTSCTTTCCEEEEECCT-TTHHHHHHHHHHTTCCCE-EES-----------
T ss_pred CCCCcEEEEECCcC-Cccc-cchhhHHHHHhcccccceEEEEecCc-cccccccceecccccccc-ccc-----------
Confidence 34456788888765 3333 2232222222232 346777766665 555555554444432211 111
Q ss_pred CCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 94 TVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 94 ~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
..++|. .++..||.+| ..+|.+|+.|+. + .++|+|++.
T Consensus 242 ------f~~dm~----~~l~~aDlvI-~raG~~Tv~E~~---a------~G~P~Ilip 279 (365)
T 3s2u_A 242 ------FISDMA----AAYAWADLVI-CRAGALTVSELT---A------AGLPAFLVP 279 (365)
T ss_dssp ------CCSCHH----HHHHHCSEEE-ECCCHHHHHHHH---H------HTCCEEECC
T ss_pred ------chhhhh----hhhccceEEE-ecCCcchHHHHH---H------hCCCeEEec
Confidence 123443 3568899766 566789988775 3 589999874
No 29
>3hbm_A UDP-sugar hydrolase; PSEG; 1.80A {Campylobacter jejuni subsp} PDB: 3hbn_A*
Probab=89.31 E-value=6.8 Score=33.07 Aligned_cols=37 Identities=8% Similarity=0.154 Sum_probs=27.3
Q ss_pred cCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 101 VSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 101 ~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.++|. .++..||.+|. +|| +|+.|+. + .++|.+++-.
T Consensus 216 ~~~m~----~~m~~aDlvI~-~gG-~T~~E~~---~------~g~P~i~ip~ 252 (282)
T 3hbm_A 216 HENIA----KLMNESNKLII-SAS-SLVNEAL---L------LKANFKAICY 252 (282)
T ss_dssp CSCHH----HHHHTEEEEEE-ESS-HHHHHHH---H------TTCCEEEECC
T ss_pred HHHHH----HHHHHCCEEEE-CCc-HHHHHHH---H------cCCCEEEEeC
Confidence 45554 35678998888 788 7988876 3 6899999854
No 30
>3h4t_A Glycosyltransferase GTFA, glycosyltransferase; vancomycin, teicoplanin, ORF1, natural products, antibiotic; HET: UDP; 1.15A {Amycolatopsis orientalis} SCOP: c.87.1.5 PDB: 3h4i_A* 1pn3_A* 1pnv_A*
Probab=88.61 E-value=8.3 Score=33.31 Aligned_cols=88 Identities=17% Similarity=0.132 Sum_probs=49.0
Q ss_pred cCCeEEecCCC---CChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCHHHHHHHHHHhcCEEEEecCCc
Q 028256 49 RNIDLVYGGGS---IGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGY 125 (211)
Q Consensus 49 ~g~~lv~GGg~---~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~ 125 (211)
+...+|++|+. ..++..+.++..+.+-+++=+........ .. ....+.+...... .. ++..+|++| -.||.
T Consensus 221 ~~~Vlv~~Gs~~~~~~~~~~~~~al~~~~~~vv~~~g~~~~~~--~~-~~~~v~~~~~~~~-~~-ll~~~d~~v-~~gG~ 294 (404)
T 3h4t_A 221 SPPVYVGFGSGPAPAEAARVAIEAVRAQGRRVVLSSGWAGLGR--ID-EGDDCLVVGEVNH-QV-LFGRVAAVV-HHGGA 294 (404)
T ss_dssp SCCEEECCTTSCCCTTHHHHHHHHHHHTTCCEEEECTTTTCCC--SS-CCTTEEEESSCCH-HH-HGGGSSEEE-ECCCH
T ss_pred CCeEEEECCCCCCcHHHHHHHHHHHHhCCCEEEEEeCCccccc--cc-CCCCEEEecCCCH-HH-HHhhCcEEE-ECCcH
Confidence 45667777753 23467777766666666554432211111 10 1122333333322 33 457888655 67888
Q ss_pred CcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 126 GTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 126 GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
||..|.. . .++|++++-
T Consensus 295 ~t~~Eal---~------~GvP~v~~p 311 (404)
T 3h4t_A 295 GTTTAVT---R------AGAPQVVVP 311 (404)
T ss_dssp HHHHHHH---H------HTCCEEECC
T ss_pred HHHHHHH---H------cCCCEEEcC
Confidence 9987765 3 589999974
No 31
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=88.49 E-value=3.3 Score=36.20 Aligned_cols=32 Identities=22% Similarity=0.286 Sum_probs=25.1
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
++..||+||. .||.||+.|.. . .++|++++..
T Consensus 332 ll~~ad~~V~-~~G~~t~~Ea~---~------~G~P~i~~p~ 363 (441)
T 2yjn_A 332 LLPTCAATVH-HGGPGSWHTAA---I------HGVPQVILPD 363 (441)
T ss_dssp HGGGCSEEEE-CCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHhhCCEEEE-CCCHHHHHHHH---H------hCCCEEEeCC
Confidence 4588998775 78899977765 3 7899999854
No 32
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=87.69 E-value=4.6 Score=34.10 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=23.7
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
.++..||+ ++..||.||+.|.. . .++|++++-
T Consensus 293 ~ll~~ad~-~v~~~G~~t~~Ea~---~------~G~P~v~~p 324 (402)
T 3ia7_A 293 SVLAHARA-CLTHGTTGAVLEAF---A------AGVPLVLVP 324 (402)
T ss_dssp HHHTTEEE-EEECCCHHHHHHHH---H------TTCCEEECG
T ss_pred HHHhhCCE-EEECCCHHHHHHHH---H------hCCCEEEeC
Confidence 45677886 55778889976654 4 789999874
No 33
>1rrv_A Glycosyltransferase GTFD; GT-B, glycosyltransferase, rossmann fold, glycopeptide, VACO antibiotic, transferase-antibiotic complex; HET: OMZ GHP OMY 3FG TYD BGC; 2.00A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=86.93 E-value=11 Score=32.45 Aligned_cols=95 Identities=19% Similarity=0.101 Sum_probs=51.0
Q ss_pred HHHHHHH-cCCeEEecCCCCC------hhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCHHHHHHHHHHh
Q 028256 42 LGKQLVE-RNIDLVYGGGSIG------LMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQ 114 (211)
Q Consensus 42 lG~~la~-~g~~lv~GGg~~G------lM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~ 114 (211)
+-++|.+ ....+|++|+. + .++.+.++..+.+-+++=+........+..+ ..+.+...... .. ++..
T Consensus 229 ~~~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~~~al~~~~~~~v~~~g~~~~~~~~~~---~~v~~~~~~~~-~~-ll~~ 302 (416)
T 1rrv_A 229 LEAFLAAGSPPVHIGFGSS-SGRGIADAAKVAVEAIRAQGRRVILSRGWTELVLPDDR---DDCFAIDEVNF-QA-LFRR 302 (416)
T ss_dssp HHHHHHSSSCCEEECCTTC-CSHHHHHHHHHHHHHHHHTTCCEEEECTTTTCCCSCCC---TTEEEESSCCH-HH-HGGG
T ss_pred HHHHHhcCCCeEEEecCCC-CccChHHHHHHHHHHHHHCCCeEEEEeCCccccccCCC---CCEEEeccCCh-HH-Hhcc
Confidence 3444543 35666777754 4 2445555555555555544332211111001 12333332221 23 4589
Q ss_pred cCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 115 ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
||+||. .||.||+.|... .++|++++..
T Consensus 303 ~d~~v~-~~G~~t~~Ea~~---------~G~P~i~~p~ 330 (416)
T 1rrv_A 303 VAAVIH-HGSAGTEHVATR---------AGVPQLVIPR 330 (416)
T ss_dssp SSEEEE-CCCHHHHHHHHH---------HTCCEEECCC
T ss_pred CCEEEe-cCChhHHHHHHH---------cCCCEEEccC
Confidence 998876 788899888753 5899999854
No 34
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=86.02 E-value=3.2 Score=35.52 Aligned_cols=34 Identities=24% Similarity=0.305 Sum_probs=25.4
Q ss_pred HHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 109 AEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 109 ~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
..++..||+|| ..||.||+.|.. . .++|++++..
T Consensus 295 ~~ll~~ad~~v-~~gG~~t~~Ea~---~------~G~P~v~~p~ 328 (398)
T 4fzr_A 295 SAIMPACDVVV-HHGGHGTTLTCL---S------EGVPQVSVPV 328 (398)
T ss_dssp HHHGGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHHHhhCCEEE-ecCCHHHHHHHH---H------hCCCEEecCC
Confidence 34667799877 688889976664 4 7999999743
No 35
>3rpz_A ADP/ATP-dependent NAD(P)H-hydrate dehydratase; structural genomics, PSI-biology; HET: AMP NPW; 1.51A {Bacillus subtilis} PDB: 3rph_A* 3rq2_A* 3rq5_A* 3rq6_A* 3rq8_A* 3rqh_A* 3rqq_A* 3rqx_A* 1kyh_A
Probab=85.63 E-value=0.79 Score=39.05 Aligned_cols=102 Identities=15% Similarity=0.194 Sum_probs=52.3
Q ss_pred HcCCeEEecCCCCChhHHH---HHHHHhcC-CeEEEEecCcCCCCCCCCCCCceeeec-CCHHHH-HHHHHHhcCEEEEe
Q 028256 48 ERNIDLVYGGGSIGLMGLV---SQAVYDGG-RHVLGVIPKTLMPREITGDTVGEVKAV-SGMHQR-KAEMARQADAFIAL 121 (211)
Q Consensus 48 ~~g~~lv~GGg~~GlM~a~---a~gA~~~g-G~viGv~P~~~~~~e~~~~~~~~~~~~-~~~~~R-k~~m~~~sDa~Ivl 121 (211)
.+|+.+|.||+. |..+|+ +++|++.| |.|.-+.|....+. ......|+++. .+.... ...+++.+|++++
T Consensus 29 ~~G~vlvigGs~-~~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~--~~~~~Pe~m~~~~~~~~~~~~~~l~~~davvi- 104 (279)
T 3rpz_A 29 TYGTALLLAGSD-DMPGAALLAGLGAMRSGLGKLVIGTSENVIPL--IVPVLPEATYWRDGWKKAADAQLEETYRAIAI- 104 (279)
T ss_dssp GGCEEEEECCBT-TBCHHHHHHHHHHHTTTCSEEEEEECTTTHHH--HTTTCTTCEEEETHHHHTTTSCCSSCCSEEEE-
T ss_pred CCCEEEEEeCCC-CCCcHHHHHHHHHHHhCCCeEEEEecHHHHHH--HHhcCCeeEEccccccchhhHhhccCCCEEEE-
Confidence 479999999975 777776 56677777 66666666543210 11111222222 111100 0112356786665
Q ss_pred cCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc
Q 028256 122 PGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 156 (211)
Q Consensus 122 pGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~ 156 (211)
+-|.|+-++..+.+. .+-...+|++| +.++.+
T Consensus 105 GPGlg~~~~~~~~~~--~~l~~~~p~Vl-DAdal~ 136 (279)
T 3rpz_A 105 GPGLPQTESVQQAVD--HVLTADCPVIL-DAGALA 136 (279)
T ss_dssp CTTCCCCHHHHHHHH--HHTTSSSCEEE-CGGGCC
T ss_pred CCCCCCCHHHHHHHH--HHHhhCCCEEE-ECCccc
Confidence 556777544433332 22224678765 665544
No 36
>1iir_A Glycosyltransferase GTFB; rossmann fold; 1.80A {Amycolatopsis orientalis} SCOP: c.87.1.5
Probab=85.49 E-value=9.8 Score=32.80 Aligned_cols=95 Identities=20% Similarity=0.137 Sum_probs=50.0
Q ss_pred HHHHHHH-cCCeEEecCCCCC----hhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCHHHHHHHHHHhcC
Q 028256 42 LGKQLVE-RNIDLVYGGGSIG----LMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQAD 116 (211)
Q Consensus 42 lG~~la~-~g~~lv~GGg~~G----lM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sD 116 (211)
+-++|.+ ....+|++|+. | +.+.+.++..+.+-+++=++..... +. ......+.+...... ..+ +..||
T Consensus 230 ~~~~l~~~~~~v~v~~Gs~-~~~~~~~~~~~~al~~~~~~~v~~~g~~~~--~~-~~~~~~v~~~~~~~~-~~~-l~~~d 303 (415)
T 1iir_A 230 LAAFLDAGPPPVYLGFGSL-GAPADAVRVAIDAIRAHGRRVILSRGWADL--VL-PDDGADCFAIGEVNH-QVL-FGRVA 303 (415)
T ss_dssp HHHHHHTSSCCEEEECC----CCHHHHHHHHHHHHHTTCCEEECTTCTTC--CC-SSCGGGEEECSSCCH-HHH-GGGSS
T ss_pred HHHHHhhCCCeEEEeCCCC-CCcHHHHHHHHHHHHHCCCeEEEEeCCCcc--cc-cCCCCCEEEeCcCCh-HHH-HhhCC
Confidence 3344533 35677887764 4 2445555555555555444322211 10 111112333333332 233 48999
Q ss_pred EEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 117 AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 117 a~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
+||. .||.||+.|.. . .++|++++..
T Consensus 304 ~~v~-~~G~~t~~Ea~---~------~G~P~i~~p~ 329 (415)
T 1iir_A 304 AVIH-HGGAGTTHVAA---R------AGAPQILLPQ 329 (415)
T ss_dssp EEEE-CCCHHHHHHHH---H------HTCCEEECCC
T ss_pred EEEe-CCChhHHHHHH---H------cCCCEEECCC
Confidence 8775 78889988775 3 5899999854
No 37
>3ufx_B Succinyl-COA synthetase beta subunit; ATP-grAsp fold, ligase; HET: GDP; 2.35A {Thermus aquaticus}
Probab=83.93 E-value=4 Score=36.32 Aligned_cols=119 Identities=15% Similarity=0.075 Sum_probs=64.8
Q ss_pred ChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCHHHHHHHHHH--hcCEEEE-ecCCcCcHHHHHHHHHH
Q 028256 61 GLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMAR--QADAFIA-LPGGYGTLEELLEVITW 137 (211)
Q Consensus 61 GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~--~sDa~Iv-lpGG~GTL~El~~~~~~ 137 (211)
|+--+.++.+..+||. |..+.+ ..... ....+..=-+.+.. ..|++++ ++||+-.-+++.+.+.-
T Consensus 258 Gl~~~t~D~i~~~G~~-----~aN~lD--~gG~a-----~~e~~~~al~~~l~d~~v~~ilv~i~ggi~~~~~vA~~i~~ 325 (397)
T 3ufx_B 258 GLVMYTLDLVNRVGGK-----PANFLD--IGGGA-----KADVVYNALKVVLKDPDVKGVFINIFGGITRADEVAKGVIR 325 (397)
T ss_dssp HHHHHHHHHHHHTTCC-----BSEEEE--CCSCC-----CHHHHHHHHHHHHTCTTCCEEEEEEEEEEEESHHHHHHHHH
T ss_pred cHHHHHHHHHHHcCCC-----cCCcEe--cCCCC-----CHHHHHHHHHHHHcCCCCCEEEEECCCCCCCHHHHHHHHHH
Confidence 5555677888888876 221111 11110 01122222233332 2577666 78998888899887753
Q ss_pred HHhCC-CCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhccCceeE
Q 028256 138 AQLGI-HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFFFFFFWL 203 (211)
Q Consensus 138 ~~lg~-~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~ 203 (211)
..-.. .+|||++--.++-.+.-.. .+.+. -|..+++++++++.+.+......|+
T Consensus 326 a~~~~~~~kPvvv~~~G~~~~~~~~---~l~~~---------gip~~~~~e~Aa~~~~~l~~~a~w~ 380 (397)
T 3ufx_B 326 ALEEGLLTKPVVMRVAGTAEEEAKK---LLEGK---------PVYMYPTSIEAAKVTVAMKGGAAWL 380 (397)
T ss_dssp HHTTTCCCSCEEEEEEEECHHHHHH---HTTTS---------SEEECSSHHHHHHHHHHSCCSCC--
T ss_pred HHHhhCCCCcEEEEccCCCHHHHHH---HHHhC---------CCcccCCHHHHHHHHHHHHHHhHHh
Confidence 32222 4799886533221122222 22221 2888999999999998776655554
No 38
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=81.95 E-value=16 Score=31.23 Aligned_cols=33 Identities=30% Similarity=0.390 Sum_probs=24.1
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.++..||+|| ..||.+|+.|.. . .++|+++...
T Consensus 295 ~~l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~i~~p~ 327 (430)
T 2iyf_A 295 AILRQADLFV-THAGAGGSQEGL---A------TATPMIAVPQ 327 (430)
T ss_dssp HHHTTCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC
T ss_pred HHhhccCEEE-ECCCccHHHHHH---H------hCCCEEECCC
Confidence 3567899755 578888866654 4 7899998754
No 39
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=78.66 E-value=4.8 Score=34.44 Aligned_cols=31 Identities=26% Similarity=0.322 Sum_probs=23.6
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
++..||+|| ..||.||+.|.. . .++|++++.
T Consensus 296 ll~~ad~~v-~~~G~~t~~Eal---~------~G~P~v~~p 326 (398)
T 3oti_A 296 LLRTCTAVV-HHGGGGTVMTAI---D------AGIPQLLAP 326 (398)
T ss_dssp HHTTCSEEE-ECCCHHHHHHHH---H------HTCCEEECC
T ss_pred HHhhCCEEE-ECCCHHHHHHHH---H------hCCCEEEcC
Confidence 567799766 689999987664 4 589999873
No 40
>2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae}
Probab=78.16 E-value=3.5 Score=34.22 Aligned_cols=70 Identities=17% Similarity=0.284 Sum_probs=39.4
Q ss_pred CeEEecCCC--------------CChhHHH-HHHHHhcCCeEEEEe-cCcCCCCCCCCCCCceeeecCC---HHHHHHHH
Q 028256 51 IDLVYGGGS--------------IGLMGLV-SQAVYDGGRHVLGVI-PKTLMPREITGDTVGEVKAVSG---MHQRKAEM 111 (211)
Q Consensus 51 ~~lv~GGg~--------------~GlM~a~-a~gA~~~gG~viGv~-P~~~~~~e~~~~~~~~~~~~~~---~~~Rk~~m 111 (211)
..||||||. .|-|+.+ ++.+.+.|..|+-+. |..+.+ ..+...+.+-+.+ |.+.-...
T Consensus 5 ~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~---~~~~~~~~~~v~s~~em~~~v~~~ 81 (232)
T 2gk4_A 5 KILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKP---EPHPNLSIREITNTKDLLIEMQER 81 (232)
T ss_dssp EEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCC---CCCTTEEEEECCSHHHHHHHHHHH
T ss_pred EEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccc---cCCCCeEEEEHhHHHHHHHHHHHh
Confidence 357888861 4877655 778888999988773 222111 1112234444444 33333333
Q ss_pred HHhcCEEEEecC
Q 028256 112 ARQADAFIALPG 123 (211)
Q Consensus 112 ~~~sDa~IvlpG 123 (211)
....|++|..-+
T Consensus 82 ~~~~Dili~aAA 93 (232)
T 2gk4_A 82 VQDYQVLIHSMA 93 (232)
T ss_dssp GGGCSEEEECSB
T ss_pred cCCCCEEEEcCc
Confidence 456888777655
No 41
>3dmy_A Protein FDRA; predicted actyl-COA synthetase, nysgrc, PSI-II, STRU genomics, protein structure initiative; 2.07A {Escherichia coli}
Probab=76.90 E-value=8.8 Score=35.14 Aligned_cols=75 Identities=15% Similarity=0.127 Sum_probs=41.4
Q ss_pred cCEEEE--e--cCCcCcH-HHHHHHHHHHHhCC-CCCcEEEE-eCCcc---chhHHHHHHHHHHcCCCCcccccceEEcC
Q 028256 115 ADAFIA--L--PGGYGTL-EELLEVITWAQLGI-HDKPVGLL-NVDGY---YNSLLSFIDKAVDEGFIAPAARYIIVSAQ 184 (211)
Q Consensus 115 sDa~Iv--l--pGG~GTL-~El~~~~~~~~lg~-~~kPiill-~~~g~---~~~l~~~l~~~~~~g~i~~~~~~~i~~~~ 184 (211)
.|++++ + |+..... +++.+++.-..-.. .+||+++. -..|. -+...+..+.+.+.| |..++
T Consensus 329 vd~vlv~~v~~~~~~~d~~~~~a~ai~~~~~~~~~~kp~v~v~~~~g~~~~~~~~~~~~~~L~~aG---------Ip~f~ 399 (480)
T 3dmy_A 329 VRVLLLDVVIGFGATADPAASLVSAWQKACAARLDNQPLYAIATVTGTERDPQCRSQQIATLEDAG---------IAVVS 399 (480)
T ss_dssp EEEEEEEEECSTTSCSCHHHHHHHHHHHHHHTSCTTSCCEEEEEEESCTTSTTCHHHHHHHHHHTT---------CEECS
T ss_pred CCEEEEEeecCCCCCCChHHHHHHHHHHHHHhccCCCCeEEEEEecCcccchhhHHHHHHHHHhCC---------CcccC
Confidence 466665 4 5665553 77777765433221 26895332 22222 112222233444433 67899
Q ss_pred CHHHHHHHhhhhcc
Q 028256 185 TAHELICKLEVFFF 198 (211)
Q Consensus 185 d~ee~~~~l~~~~~ 198 (211)
+|+++++.+.....
T Consensus 400 spe~Av~a~~~l~~ 413 (480)
T 3dmy_A 400 SLPEATLLAAALIH 413 (480)
T ss_dssp SHHHHHHHHHHHTS
T ss_pred CHHHHHHHHHHHHh
Confidence 99999999987654
No 42
>3hbf_A Flavonoid 3-O-glucosyltransferase; glycosyltransferase, GT-B fold, GT1, phenylpropanoid metabolism; HET: UDP MYC; 2.10A {Medicago truncatula} SCOP: c.87.1.0 PDB: 3hbj_A*
Probab=76.71 E-value=6.5 Score=35.46 Aligned_cols=40 Identities=13% Similarity=0.191 Sum_probs=28.1
Q ss_pred HHHHhcCE-EEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHH
Q 028256 110 EMARQADA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLL 160 (211)
Q Consensus 110 ~m~~~sDa-~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~ 160 (211)
.++.++|+ .++-.||.||..|... +++|++++-. +.|...
T Consensus 339 ~vL~h~~v~~fvtH~G~~S~~Eal~---------~GvP~i~~P~--~~DQ~~ 379 (454)
T 3hbf_A 339 EILKHSSVGVFLTHSGWNSVLECIV---------GGVPMISRPF--FGDQGL 379 (454)
T ss_dssp HHHHSTTEEEEEECCCHHHHHHHHH---------HTCCEEECCC--STTHHH
T ss_pred HHHhhcCcCeEEecCCcchHHHHHH---------cCCCEecCcc--cccHHH
Confidence 45577774 6777899999888753 6899998743 445433
No 43
>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A
Probab=76.38 E-value=12 Score=31.87 Aligned_cols=155 Identities=12% Similarity=0.047 Sum_probs=70.0
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeecC-----CHHHHHHHHH-HhcCEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAVS-----GMHQRKAEMA-RQADAFIALP 122 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~~-----~~~~Rk~~m~-~~sDa~Ivlp 122 (211)
..+|+|+|..|++ +..-|+..|. +|+++-.+.. ..+.. .-..+.++... ++.++-.... ...|++|-..
T Consensus 174 ~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~~i~~~~~~g~D~vid~~ 250 (356)
T 1pl8_A 174 KVLVCGAGPIGMV--TLLVAKAMGAAQVVVTDLSAT-RLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECT 250 (356)
T ss_dssp EEEEECCSHHHHH--HHHHHHHTTCSEEEEEESCHH-HHHHHHHTTCSEEEECSSCCHHHHHHHHHHHHTSCCSEEEECS
T ss_pred EEEEECCCHHHHH--HHHHHHHcCCCEEEEECCCHH-HHHHHHHhCCCEEEcCcccccchHHHHHHHHhCCCCCEEEECC
Confidence 4568887654554 4555677787 7888854321 00110 01122333222 1211111111 2368888887
Q ss_pred CCcCcHHHHHHHHHH----HHhCCCCCc------------EEEEeCCccchhHHHHHHHHHHcCCCCcc-cccceEEcCC
Q 028256 123 GGYGTLEELLEVITW----AQLGIHDKP------------VGLLNVDGYYNSLLSFIDKAVDEGFIAPA-ARYIIVSAQT 185 (211)
Q Consensus 123 GG~GTL~El~~~~~~----~~lg~~~kP------------iill~~~g~~~~l~~~l~~~~~~g~i~~~-~~~~i~~~~d 185 (211)
|+.-++++.+..+.- ..+|....+ +-+.....+.+.+.+ +-.++.+|-++.+ .....+-.++
T Consensus 251 g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~-~~~l~~~g~i~~~~~i~~~~~l~~ 329 (356)
T 1pl8_A 251 GAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPV-AISMLASKSVNVKPLVTHRFPLEK 329 (356)
T ss_dssp CCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHH-HHHHHHTTSCCCGGGEEEEEEGGG
T ss_pred CChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHH-HHHHHHcCCCChHHheEEEecHHH
Confidence 775566655543310 000100000 111111111122222 2345566766532 2233455778
Q ss_pred HHHHHHHhhhhccCceeEEeeeecC
Q 028256 186 AHELICKLEVFFFFFFWLFSFSVLN 210 (211)
Q Consensus 186 ~ee~~~~l~~~~~~~~~~~~~~~~~ 210 (211)
.+++++.+.+- ...+-..+|++..
T Consensus 330 ~~~A~~~~~~~-~~gKvvi~~~~~~ 353 (356)
T 1pl8_A 330 ALEAFETFKKG-LGLKIMLKCDPSD 353 (356)
T ss_dssp HHHHHHHHHTT-CCSEEEEECCTTC
T ss_pred HHHHHHHHhCC-CceEEEEeCCCCC
Confidence 88888888765 4445555555443
No 44
>2f9f_A First mannosyl transferase (WBAZ-1); alpha-beta protein, structural genomics, PSI, protein struct initiative; 1.80A {Archaeoglobus fulgidus} SCOP: c.87.1.8
Probab=75.46 E-value=11 Score=28.35 Aligned_cols=69 Identities=13% Similarity=0.232 Sum_probs=44.6
Q ss_pred HHHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcC
Q 028256 107 RKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQ 184 (211)
Q Consensus 107 Rk~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~ 184 (211)
....++..||++|..+ .|+|. =++|+++ .++|||..+.. .+.+ + +.......++ .+
T Consensus 90 e~~~~~~~adi~v~ps~~e~~~~--~~~Eama------~G~PvI~~~~~----~~~e----~-----i~~~~~g~~~-~~ 147 (177)
T 2f9f_A 90 ELIDLYSRCKGLLCTAKDEDFGL--TPIEAMA------SGKPVIAVNEG----GFKE----T-----VINEKTGYLV-NA 147 (177)
T ss_dssp HHHHHHHHCSEEEECCSSCCSCH--HHHHHHH------TTCCEEEESSH----HHHH----H-----CCBTTTEEEE-CS
T ss_pred HHHHHHHhCCEEEeCCCcCCCCh--HHHHHHH------cCCcEEEeCCC----CHHH----H-----hcCCCccEEe-CC
Confidence 3456778999888744 45553 2577777 79999997653 2222 1 2222233344 89
Q ss_pred CHHHHHHHhhhhc
Q 028256 185 TAHELICKLEVFF 197 (211)
Q Consensus 185 d~ee~~~~l~~~~ 197 (211)
|++++.+.|.+..
T Consensus 148 d~~~l~~~i~~l~ 160 (177)
T 2f9f_A 148 DVNEIIDAMKKVS 160 (177)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 9999999998765
No 45
>3rss_A Putative uncharacterized protein; unknown function, ADP/ATP-dependent NAD(P)H-hydrate dehydrat lyase; HET: NAP; 1.95A {Thermotoga maritima} PDB: 3rrb_A* 2ax3_A* 3rre_A* 3rrj_A* 3rs8_A* 3rs9_A* 3rsf_A* 3rsg_A* 3rrf_A* 3rsq_A* 3rt7_A* 3rt9_A* 3rta_A* 3rtb_A* 3rtc_A* 3rtd_A* 3rte_A* 3rtg_A* 3ru2_A* 3ru3_A*
Probab=75.19 E-value=8.5 Score=35.34 Aligned_cols=102 Identities=19% Similarity=0.152 Sum_probs=50.8
Q ss_pred HcCCeEEecCCCCChhHH---HHHHHHhcC-CeEEEEecCcCCCC-CCCCCCCceeeec--------CCHHHHHHHHHHh
Q 028256 48 ERNIDLVYGGGSIGLMGL---VSQAVYDGG-RHVLGVIPKTLMPR-EITGDTVGEVKAV--------SGMHQRKAEMARQ 114 (211)
Q Consensus 48 ~~g~~lv~GGg~~GlM~a---~a~gA~~~g-G~viGv~P~~~~~~-e~~~~~~~~~~~~--------~~~~~Rk~~m~~~ 114 (211)
..|+.+|.||+. |..+| ++++|++.| |.|.-+.|....+. ....+++.-.... .++ +.-.-++..
T Consensus 243 ~~G~vlvigGs~-~~~GA~~Laa~aAlr~GaGlv~~~~~~~~~~~~~~~~PE~m~~~~~~~~~~~~~~~~-~~~~~~~~~ 320 (502)
T 3rss_A 243 TYGKVLIIAGSR-LYSGAPVLSGMGSLKVGTGLVKLAVPFPQNLIATSRFPELISVPIDTEKGFFSLQNL-QECLELSKD 320 (502)
T ss_dssp GGCEEEEECCCS-SCCSHHHHHHHHHHHTTCSEEEEEEETTTHHHHHHHCTTSEEEEECCSSSSCCGGGH-HHHHHHHTT
T ss_pred CCceEEEEECCC-CCCCHHHHHHHHHHHhCcCeEEEEEcHHHHHHHhhcCCeEEEecccccccccchhhH-HHHHHHhcc
Confidence 379999999974 55555 467777777 56666666542110 0001111111011 111 222335677
Q ss_pred cCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCc
Q 028256 115 ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDG 154 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g 154 (211)
+|++++=|| .|+-++..+.+.. -+...++|++| +.++
T Consensus 321 ~davviGpG-lg~~~~~~~~~~~-~l~~~~~pvVl-Dadg 357 (502)
T 3rss_A 321 VDVVAIGPG-LGNNEHVREFVNE-FLKTLEKPAVI-DADA 357 (502)
T ss_dssp CSEEEECTT-CCCSHHHHHHHHH-HHHHCCSCEEE-CHHH
T ss_pred CCEEEEeCC-CCCCHHHHHHHHH-HHHhcCCCEEE-eCcc
Confidence 898777664 5554443332221 11124788864 5543
No 46
>3ico_A 6PGL, 6-phosphogluconolactonase; ssgcid, infectious disease, niaid, hydrolase, structural genomics; 2.15A {Mycobacterium tuberculosis}
Probab=71.78 E-value=18 Score=30.26 Aligned_cols=81 Identities=19% Similarity=0.107 Sum_probs=47.2
Q ss_pred HhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc------hhHHHHHH-HHHHcCCCCcccccceEEc--
Q 028256 113 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY------NSLLSFID-KAVDEGFIAPAARYIIVSA-- 183 (211)
Q Consensus 113 ~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~------~~l~~~l~-~~~~~g~i~~~~~~~i~~~-- 183 (211)
+...+.|+|+||. |...+++.+.-..-...=+-|.+++.+.|| +....+++ ++.+.--|+++....+.-.
T Consensus 53 ~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~ 131 (268)
T 3ico_A 53 ARGQALIVLTGGG-NGIALLRYLSAQAQQIEWSKVHLFWGDERYVPEDDDERNLKQARRALLNHVDIPSNQVHPMAASDG 131 (268)
T ss_dssp HHSCEEEEECCSH-HHHHHHHHHHHHGGGSCGGGEEEEESEEECSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTTS
T ss_pred hcCceEEEEecCC-chhHHHHHHHHHhhhhhheeeEEeecccccCCCCcchhHHHHHHHHHHhccCCcccccccccccCC
Confidence 3678999999995 777777776642211222568888888887 34555553 4444322444333333221
Q ss_pred ---CCHHHHHHHhh
Q 028256 184 ---QTAHELICKLE 194 (211)
Q Consensus 184 ---~d~ee~~~~l~ 194 (211)
.|+++..+..+
T Consensus 132 ~~~~~~~~~a~~Ye 145 (268)
T 3ico_A 132 DFGGDLDAAALAYE 145 (268)
T ss_dssp TTTTCHHHHHHHHH
T ss_pred CcccchhHHHHHHH
Confidence 57777665544
No 47
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=71.14 E-value=7.5 Score=32.46 Aligned_cols=59 Identities=20% Similarity=0.248 Sum_probs=38.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe------------------------------EEecCCCCChhHHHH
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID------------------------------LVYGGGSIGLMGLVS 67 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~------------------------------lv~GGg~~GlM~a~a 67 (211)
|++|+|+.-.. ++...+.++++.++|.++|+. ||.-||. |.+-.++
T Consensus 5 mkki~ii~np~---~~~~~~~~~~i~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~D~vi~~GGD-GT~l~a~ 80 (292)
T 2an1_A 5 FKCIGIVGHPR---HPTALTTHEMLYRWLCDQGYEVIVEQQIAHELQLKNVPTGTLAEIGQQADLAVVVGGD-GNMLGAA 80 (292)
T ss_dssp CCEEEEECC----------CHHHHHHHHHHHTTCEEEEEHHHHHHTTCSSCCEECHHHHHHHCSEEEECSCH-HHHHHHH
T ss_pred CcEEEEEEcCC---CHHHHHHHHHHHHHHHHCCCEEEEecchhhhcccccccccchhhcccCCCEEEEEcCc-HHHHHHH
Confidence 67899885322 233445567777777776653 3445666 9999999
Q ss_pred HHHHhcCCeEEEE
Q 028256 68 QAVYDGGRHVLGV 80 (211)
Q Consensus 68 ~gA~~~gG~viGv 80 (211)
++....+-.++||
T Consensus 81 ~~~~~~~~P~lGI 93 (292)
T 2an1_A 81 RTLARYDINVIGI 93 (292)
T ss_dssp HHHTTSSCEEEEB
T ss_pred HHhhcCCCCEEEE
Confidence 9888777788998
No 48
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=71.13 E-value=7.2 Score=33.01 Aligned_cols=66 Identities=17% Similarity=0.254 Sum_probs=39.2
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEc-----CCH
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA-----QTA 186 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~-----~d~ 186 (211)
+..||+|| ..||.||+.|.. . .++|++++.. ..+.. ...+.+.+.|.- +.+. .|+
T Consensus 284 l~~ad~~v-~~~G~~t~~Ea~---~------~G~P~v~~p~--~~~q~-~~a~~~~~~g~g-------~~~~~~~~~~~~ 343 (391)
T 3tsa_A 284 LRTCELVI-CAGGSGTAFTAT---R------LGIPQLVLPQ--YFDQF-DYARNLAAAGAG-------ICLPDEQAQSDH 343 (391)
T ss_dssp GGGCSEEE-ECCCHHHHHHHH---H------TTCCEEECCC--STTHH-HHHHHHHHTTSE-------EECCSHHHHTCH
T ss_pred HhhCCEEE-eCCCHHHHHHHH---H------hCCCEEecCC--cccHH-HHHHHHHHcCCE-------EecCcccccCCH
Confidence 38899877 678889976664 4 7999999743 22222 112334443321 1222 367
Q ss_pred HHHHHHhhhhc
Q 028256 187 HELICKLEVFF 197 (211)
Q Consensus 187 ee~~~~l~~~~ 197 (211)
+++.+.+.+..
T Consensus 344 ~~l~~ai~~ll 354 (391)
T 3tsa_A 344 EQFTDSIATVL 354 (391)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77777776654
No 49
>2pq6_A UDP-glucuronosyl/UDP-glucosyltransferase; glycosylation, isoflavonoid, uridine diphosphate glycosyltransferase; 2.10A {Medicago truncatula} SCOP: c.87.1.10
Probab=71.09 E-value=21 Score=31.76 Aligned_cols=68 Identities=7% Similarity=-0.017 Sum_probs=39.4
Q ss_pred HHHhcCE-EEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHH-cCCCCcccccceEE--cCCH
Q 028256 111 MARQADA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVD-EGFIAPAARYIIVS--AQTA 186 (211)
Q Consensus 111 m~~~sDa-~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~-~g~i~~~~~~~i~~--~~d~ 186 (211)
++.++++ .+|--||.||..|... +++|++++-. +.|...+ .+.+.+ .|.- +.+ .-+.
T Consensus 366 ~L~h~~~~~~vth~G~~s~~Eal~---------~GvP~i~~P~--~~dQ~~n-a~~~~~~~G~g-------~~l~~~~~~ 426 (482)
T 2pq6_A 366 VLNHPSIGGFLTHCGWNSTTESIC---------AGVPMLCWPF--FADQPTD-CRFICNEWEIG-------MEIDTNVKR 426 (482)
T ss_dssp HHTSTTEEEEEECCCHHHHHHHHH---------HTCCEEECCC--STTHHHH-HHHHHHTSCCE-------EECCSSCCH
T ss_pred HhcCCCCCEEEecCCcchHHHHHH---------cCCCEEecCc--ccchHHH-HHHHHHHhCEE-------EEECCCCCH
Confidence 4555665 6777899999888753 6899999743 3444332 233432 3431 111 1266
Q ss_pred HHHHHHhhhhc
Q 028256 187 HELICKLEVFF 197 (211)
Q Consensus 187 ee~~~~l~~~~ 197 (211)
+++.+.|.+..
T Consensus 427 ~~l~~~i~~ll 437 (482)
T 2pq6_A 427 EELAKLINEVI 437 (482)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 77766666554
No 50
>3tx2_A Probable 6-phosphogluconolactonase; ssgcid, hydrolase; 1.50A {Mycobacterium abscessus}
Probab=69.35 E-value=26 Score=28.87 Aligned_cols=83 Identities=17% Similarity=0.055 Sum_probs=47.3
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc------hhHHHHHH-HHHHcCCCCcccccceEEc-
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY------NSLLSFID-KAVDEGFIAPAARYIIVSA- 183 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~------~~l~~~l~-~~~~~g~i~~~~~~~i~~~- 183 (211)
-+...+.|+|+||. |...+++.+.-..-...=..|.+++.+.|| +....+++ ++.+.--|+++....+.-.
T Consensus 36 ~~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~ 114 (251)
T 3tx2_A 36 AERGKAMIVLTGGG-TGIALLKHLRDVASGLDWTNVHVFWGDDRYVPKTDPERNAWQAWEALLEHVNFPLRNMHAMPNSE 114 (251)
T ss_dssp HHHSCEEEEECCSH-HHHHHHHHHHHHHTTSCGGGEEEEESEEESSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTT
T ss_pred HhCCCEEEEECCCc-hHHHHHHHHHhhccCCCCceeEEEeeeeccCCCCChHHHHHHHHHHhhccCCCCHHHEEECCCcc
Confidence 34678999999995 667777766643312222568888888887 33555553 3444322333333222212
Q ss_pred ----CCHHHHHHHhhh
Q 028256 184 ----QTAHELICKLEV 195 (211)
Q Consensus 184 ----~d~ee~~~~l~~ 195 (211)
+|+++..+..++
T Consensus 115 ~~~~~~~~~~a~~Ye~ 130 (251)
T 3tx2_A 115 SEYGTDLDAAALAYEQ 130 (251)
T ss_dssp SSCTTCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 477776655543
No 51
>1v4v_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, two domains, homodimer, riken structural genomics/proteomics initiative, RSGI; HET: MSE; 1.80A {Thermus thermophilus} SCOP: c.87.1.3
Probab=67.29 E-value=8.5 Score=32.26 Aligned_cols=65 Identities=15% Similarity=0.170 Sum_probs=39.5
Q ss_pred HHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe-CCccchhHHHHHHHHHHcCCCCcccccceEEcCC
Q 028256 107 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN-VDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 185 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~-~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d 185 (211)
....++..||+|| +|. |++ +.|+++ .++|++... ..|. ..+ ++.|. -+.+-.|
T Consensus 267 ~~~~~~~~ad~~v-~~S--~g~--~lEA~a------~G~PvI~~~~~~~~-~~~-------~~~g~-------g~lv~~d 320 (376)
T 1v4v_A 267 SMAALMRASLLLV-TDS--GGL--QEEGAA------LGVPVVVLRNVTER-PEG-------LKAGI-------LKLAGTD 320 (376)
T ss_dssp HHHHHHHTEEEEE-ESC--HHH--HHHHHH------TTCCEEECSSSCSC-HHH-------HHHTS-------EEECCSC
T ss_pred HHHHHHHhCcEEE-ECC--cCH--HHHHHH------cCCCEEeccCCCcc-hhh-------hcCCc-------eEECCCC
Confidence 3455678899885 554 555 668887 799999873 3332 222 12221 1222268
Q ss_pred HHHHHHHhhhhc
Q 028256 186 AHELICKLEVFF 197 (211)
Q Consensus 186 ~ee~~~~l~~~~ 197 (211)
++++.+.|.+..
T Consensus 321 ~~~la~~i~~ll 332 (376)
T 1v4v_A 321 PEGVYRVVKGLL 332 (376)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888777664
No 52
>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}
Probab=66.54 E-value=43 Score=27.88 Aligned_cols=42 Identities=7% Similarity=-0.016 Sum_probs=25.5
Q ss_pred HHHHHHHHHHcCCeEEecCCC----------CChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGS----------IGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~----------~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+..+-. ..-.+.+.+...+.|+.+..+
T Consensus 40 G~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (322)
T 3qlj_A 40 GRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVAD 91 (322)
T ss_dssp HHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEE
Confidence 456888888889888765421 133444555555566665554
No 53
>3f6r_A Flavodoxin; FMN binding, oxidized, electron transport, flavoprotein, FMN, transport; HET: FMN; 2.00A {Desulfovibrio desulfuricans} SCOP: c.23.5.0 PDB: 3f6s_A* 3f90_A* 3kap_A* 3kaq_A*
Probab=66.06 E-value=4 Score=30.15 Aligned_cols=33 Identities=21% Similarity=0.374 Sum_probs=22.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
|++|.|+.+|..++. .+.|+.+++.|.+.|+.+
T Consensus 1 M~ki~I~y~S~tGnT---~~~A~~ia~~l~~~g~~v 33 (148)
T 3f6r_A 1 MSKVLIVFGSSTGNT---ESIAQKLEELIAAGGHEV 33 (148)
T ss_dssp -CEEEEEEECSSSHH---HHHHHHHHHHHHTTTCEE
T ss_pred CCeEEEEEECCCchH---HHHHHHHHHHHHhCCCeE
Confidence 457777777877643 356788888887776654
No 54
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=65.86 E-value=61 Score=27.46 Aligned_cols=102 Identities=16% Similarity=0.072 Sum_probs=57.9
Q ss_pred EeCCCCCCCHHHHHHHHHHHHHHHHcCCeE-----EecCCCCCh-----------hHHHHHHHHhcCCeEEEEecCcCCC
Q 028256 24 FCGSSPGKSPSYQLAAIQLGKQLVERNIDL-----VYGGGSIGL-----------MGLVSQAVYDGGRHVLGVIPKTLMP 87 (211)
Q Consensus 24 fggs~~~~~~~~~~~A~~lG~~la~~g~~l-----v~GGg~~Gl-----------M~a~a~gA~~~gG~viGv~P~~~~~ 87 (211)
+...|.-+-++-.+.++++.+...+.|..| ..||...|+ .+.+.+=+.+.|-..+.|.-.. .
T Consensus 102 MiDgS~lp~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgg~ed~~~~~~~~~~~T~Peea~~Fv~~TgvD~LAvaiGt--~ 179 (286)
T 1gvf_A 102 MIDGSHFPFAENVKLVKSVVDFCHSQDCSVEAELGRLGGVEDDMSVDAESAFLTDPQEAKRFVELTGVDSLAVAIGT--A 179 (286)
T ss_dssp EECCTTSCHHHHHHHHHHHHHHHHHTTCEEEEEESCCC-----------CCSSCCHHHHHHHHHHHCCSEEEECSSC--C
T ss_pred EECCCCCCHHHHHHHHHHHHHHHHHcCCEEEEEEeeccCcccCcccccccccCCCHHHHHHHHHHHCCCEEEeecCc--c
Confidence 333343345566788899999998888887 445533343 2334444445565655552111 0
Q ss_pred CCCCCCCCceeeecCCH-HHHHHHHHHhcCEEEEecCCcCcHHHHHHH
Q 028256 88 REITGDTVGEVKAVSGM-HQRKAEMARQADAFIALPGGYGTLEELLEV 134 (211)
Q Consensus 88 ~e~~~~~~~~~~~~~~~-~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~ 134 (211)
+. .|.. ...+ ++|...+-+..+.-+||-||+|+-+|-+..
T Consensus 180 HG----~Y~~---~p~Ld~~~L~~I~~~~~vpLVlHGgSG~~~e~i~~ 220 (286)
T 1gvf_A 180 HG----LYSK---TPKIDFQRLAEIREVVDVPLVLHGASDVPDEFVRR 220 (286)
T ss_dssp SS----CCSS---CCCCCHHHHHHHHHHCCSCEEECCCTTCCHHHHHH
T ss_pred cc----CcCC---CCccCHHHHHHHHHhcCCCEEEECCCCCCHHHHHH
Confidence 11 0100 0112 577777777789999999999998886543
No 55
>2hna_A Protein MIOC, flavodoxin; alpha-beta sandwich, flavodoxin fold, electron transport; NMR {Escherichia coli} PDB: 2hnb_A
Probab=65.15 E-value=10 Score=27.99 Aligned_cols=34 Identities=21% Similarity=0.315 Sum_probs=25.9
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
|++|.|+.+|..++.. +.|+.+++.|.+.|+.+.
T Consensus 1 M~ki~I~Y~S~tGnT~---~~A~~ia~~l~~~g~~v~ 34 (147)
T 2hna_A 1 MADITLISGSTLGGAE---YVAEHLAEKLEEAGFTTE 34 (147)
T ss_dssp CCSEEEECCTTSCCCH---HHHHHHHHHHHHTTCCEE
T ss_pred CCeEEEEEECCchHHH---HHHHHHHHHHHHCCCceE
Confidence 4567777788888765 457889999988887654
No 56
>3beo_A UDP-N-acetylglucosamine 2-epimerase; UDP-GLCNAC, allosteric, regulation, isomerase; HET: UD1 UDP; 1.70A {Bacillus anthracis} PDB: 1o6c_A
Probab=65.07 E-value=57 Score=26.81 Aligned_cols=65 Identities=11% Similarity=0.134 Sum_probs=39.8
Q ss_pred HHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC-CccchhHHHHHHHHHHcCCCCcccccceEEcCC
Q 028256 107 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-DGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 185 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~-~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d 185 (211)
....++..||++| +|. |+. +.|+++ .++||+..+. .| ...+ ++.| .-+.+-.|
T Consensus 275 ~~~~~~~~ad~~v-~~s--g~~--~lEA~a------~G~Pvi~~~~~~~-~~e~-------v~~g-------~g~~v~~d 328 (375)
T 3beo_A 275 DFHNVAARSYLML-TDS--GGV--QEEAPS------LGVPVLVLRDTTE-RPEG-------IEAG-------TLKLAGTD 328 (375)
T ss_dssp HHHHHHHTCSEEE-ECC--HHH--HHHHHH------HTCCEEECSSCCS-CHHH-------HHTT-------SEEECCSC
T ss_pred HHHHHHHhCcEEE-ECC--CCh--HHHHHh------cCCCEEEecCCCC-Ccee-------ecCC-------ceEEcCCC
Confidence 3455678899886 454 444 677777 6899998743 43 3332 2222 11333358
Q ss_pred HHHHHHHhhhhc
Q 028256 186 AHELICKLEVFF 197 (211)
Q Consensus 186 ~ee~~~~l~~~~ 197 (211)
++++.+.|.+..
T Consensus 329 ~~~la~~i~~ll 340 (375)
T 3beo_A 329 EETIFSLADELL 340 (375)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888887654
No 57
>3qhp_A Type 1 capsular polysaccharide biosynthesis prote (CAPJ); rossmann fold, glycosyltransferase, transferase; 1.50A {Helicobacter pylori}
Probab=64.54 E-value=19 Score=26.19 Aligned_cols=69 Identities=13% Similarity=0.141 Sum_probs=42.8
Q ss_pred HHHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCC-cEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEc
Q 028256 107 RKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDK-PVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 183 (211)
Q Consensus 107 Rk~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~k-Piill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 183 (211)
....++..||++|.-. .|+|. =+.|+++ .++ ||+..+..+....+.. . ...++..
T Consensus 67 ~~~~~~~~adv~v~ps~~e~~~~--~~~Eama------~G~vPvi~~~~~~~~~~~~~------------~--~~~~~~~ 124 (166)
T 3qhp_A 67 ELLEILKTCTLYVHAANVESEAI--ACLEAIS------VGIVPVIANSPLSATRQFAL------------D--ERSLFEP 124 (166)
T ss_dssp HHHHHHTTCSEEEECCCSCCCCH--HHHHHHH------TTCCEEEECCTTCGGGGGCS------------S--GGGEECT
T ss_pred HHHHHHHhCCEEEECCcccCccH--HHHHHHh------cCCCcEEeeCCCCchhhhcc------------C--CceEEcC
Confidence 3455678899877643 34553 4667777 787 9998443333333221 1 1226667
Q ss_pred CCHHHHHHHhhhhc
Q 028256 184 QTAHELICKLEVFF 197 (211)
Q Consensus 184 ~d~ee~~~~l~~~~ 197 (211)
+|++++.+.|.+..
T Consensus 125 ~~~~~l~~~i~~l~ 138 (166)
T 3qhp_A 125 NNAKDLSAKIDWWL 138 (166)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 89999998888764
No 58
>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*
Probab=64.48 E-value=25 Score=28.59 Aligned_cols=42 Identities=17% Similarity=0.186 Sum_probs=25.0
Q ss_pred HHHHHHHHHHcCCeEEecCC-CCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGG-SIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg-~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+++++.|+++|+.|+.... .....+.+.+...+.|+.+..+
T Consensus 41 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (269)
T 4dmm_A 41 GRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAV 83 (269)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEE
Confidence 46788888888988865433 2233444444444556665554
No 59
>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A
Probab=64.25 E-value=26 Score=29.44 Aligned_cols=141 Identities=13% Similarity=0.060 Sum_probs=64.9
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC-CCCCceeeec--CCHHHHHHHHHHhcCEEEEecCCcC
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT-GDTVGEVKAV--SGMHQRKAEMARQADAFIALPGGYG 126 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~-~~~~~~~~~~--~~~~~Rk~~m~~~sDa~IvlpGG~G 126 (211)
...+|+|+|..|+ +++.-|+..|.+|+++..+.. ..+.. .-..+..+.. .++.++-..+....|++|-.-|+.-
T Consensus 166 ~~VlV~GaG~vG~--~~~~~a~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~~~d~~~~~~~~~~~~~~~~~d~vid~~g~~~ 242 (339)
T 1rjw_A 166 EWVAIYGIGGLGH--VAVQYAKAMGLNVVAVDIGDE-KLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKP 242 (339)
T ss_dssp CEEEEECCSTTHH--HHHHHHHHTTCEEEEECSCHH-HHHHHHHTTCSEEECTTTSCHHHHHHHHHSSEEEEEESSCCHH
T ss_pred CEEEEECCCHHHH--HHHHHHHHcCCEEEEEeCCHH-HHHHHHHCCCCEEecCCCccHHHHHHHHhCCCCEEEECCCCHH
Confidence 3467888865444 456667778889988853221 00000 0011122211 2333222111234677766666545
Q ss_pred cHHHHHHHHH----HHHhCCCCCcE------------EEEeCCc-cchhHHHHHHHHHHcCCCCcccccceEEcCCHHHH
Q 028256 127 TLEELLEVIT----WAQLGIHDKPV------------GLLNVDG-YYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHEL 189 (211)
Q Consensus 127 TL~El~~~~~----~~~lg~~~kPi------------ill~~~g-~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~ 189 (211)
++++.+..+. +..+|....++ -+..... .++.+.+ +-.++.+|-+++.. + .+-.++.+++
T Consensus 243 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~-~~~l~~~g~l~~~~-~-~~~l~~~~~A 319 (339)
T 1rjw_A 243 AFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQE-ALQFAAEGKVKTII-E-VQPLEKINEV 319 (339)
T ss_dssp HHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHH-HHHHHHTTSCCCCE-E-EEEGGGHHHH
T ss_pred HHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHH-HHHHHHcCCCCccE-E-EEcHHHHHHH
Confidence 5555443321 00011111111 1111111 1223333 33456777776642 2 4567788888
Q ss_pred HHHhhhh
Q 028256 190 ICKLEVF 196 (211)
Q Consensus 190 ~~~l~~~ 196 (211)
++.+.+-
T Consensus 320 ~~~~~~~ 326 (339)
T 1rjw_A 320 FDRMLKG 326 (339)
T ss_dssp HHHHHTT
T ss_pred HHHHHcC
Confidence 8887654
No 60
>3oc6_A 6-phosphogluconolactonase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, carboxylic ester hydrolase; 2.10A {Mycobacterium smegmatis}
Probab=64.22 E-value=27 Score=28.69 Aligned_cols=83 Identities=17% Similarity=0.055 Sum_probs=46.8
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc------hhHHHHHH-HHHHcCCCCcccccceEEc-
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY------NSLLSFID-KAVDEGFIAPAARYIIVSA- 183 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~------~~l~~~l~-~~~~~g~i~~~~~~~i~~~- 183 (211)
.+...+.|+|+||. |...+++.+.-..-+..=+.|.+++.+.|| +....+++ ++.+.--|+++....+.-.
T Consensus 36 ~~~~~~~l~LsgGs-tP~~~y~~L~~~~~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~~~ll~~v~i~~~~i~~~~~~~ 114 (248)
T 3oc6_A 36 GERGQATIVLTGGG-TGIGLLKRVRERSGEIDWSKVHIYWGDERFVPQDDDERNDKQAREALLDHIGIPPVNVHAMAASD 114 (248)
T ss_dssp HHHSCEEEEECCSH-HHHHHHHHHHHTGGGSCGGGEEEEESEEECSCTTCTTCHHHHHHHHTGGGSCCCGGGBCCCCCTT
T ss_pred HhCCCEEEEECCCc-cHHHHHHHHHhhccCCCcceEEEEEeeeccCCCCChHHHHHHHHHHhhccCCCChhhEEecCCcc
Confidence 34678999999995 777777776642211222567888888777 23455553 3444322333333222212
Q ss_pred ----CCHHHHHHHhhh
Q 028256 184 ----QTAHELICKLEV 195 (211)
Q Consensus 184 ----~d~ee~~~~l~~ 195 (211)
+|+++..+..++
T Consensus 115 ~~~~~~~~~~a~~Ye~ 130 (248)
T 3oc6_A 115 GEFGDDLEAAAAGYAQ 130 (248)
T ss_dssp STTTTCHHHHHHHHHH
T ss_pred cccCCCHHHHHHHHHH
Confidence 477776665543
No 61
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=62.83 E-value=62 Score=26.49 Aligned_cols=71 Identities=13% Similarity=0.044 Sum_probs=38.7
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCC--HH
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT--AH 187 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d--~e 187 (211)
.++..||++|. |+|.+|+-| +++ .++|++..+..|.-++-....+.+.+.|. ..+.-.+| ++
T Consensus 250 ~~~~~ad~~v~-~sg~~~~~E---Ama------~G~Pvi~~~~~g~~~~q~~~~~~~~~~g~------g~~~~~~d~~~~ 313 (364)
T 1f0k_A 250 AAYAWADVVVC-RSGALTVSE---IAA------AGLPALFVPFQHKDRQQYWNALPLEKAGA------AKIIEQPQLSVD 313 (364)
T ss_dssp HHHHHCSEEEE-CCCHHHHHH---HHH------HTCCEEECCCCCTTCHHHHHHHHHHHTTS------EEECCGGGCCHH
T ss_pred HHHHhCCEEEE-CCchHHHHH---HHH------hCCCEEEeeCCCCchhHHHHHHHHHhCCc------EEEeccccCCHH
Confidence 46788997765 555455444 445 58999998876552211111223333331 11222334 77
Q ss_pred HHHHHhhhh
Q 028256 188 ELICKLEVF 196 (211)
Q Consensus 188 e~~~~l~~~ 196 (211)
++.+.|.+.
T Consensus 314 ~la~~i~~l 322 (364)
T 1f0k_A 314 AVANTLAGW 322 (364)
T ss_dssp HHHHHHHTC
T ss_pred HHHHHHHhc
Confidence 777777655
No 62
>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}
Probab=62.63 E-value=36 Score=27.41 Aligned_cols=42 Identities=7% Similarity=0.109 Sum_probs=23.6
Q ss_pred HHHHHHHHHHcCCeEEec-CCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYG-GGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~G-Gg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.. +.....-+.+.+...+.++.+..+
T Consensus 39 G~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (272)
T 4e3z_A 39 GAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAI 81 (272)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEE
Confidence 467788888888887543 322223334444444456555544
No 63
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=62.56 E-value=15 Score=30.44 Aligned_cols=57 Identities=11% Similarity=0.146 Sum_probs=41.3
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe--------EEecCCCCChhHHHHHHHHhc--CCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID--------LVYGGGSIGLMGLVSQAVYDG--GRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~--------lv~GGg~~GlM~a~a~gA~~~--gG~viGv 80 (211)
++|+++.- . ++...+.++++.+.|.++|+. +|.-||. |.|-.+++..... +-.++||
T Consensus 1 mki~ii~n--~--~~~~~~~~~~l~~~l~~~g~~v~~~~~D~vv~lGGD-GT~l~aa~~~~~~~~~~PilGI 67 (272)
T 2i2c_A 1 MKYMITSK--G--DEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGGD-GTFLSAFHQYEERLDEIAFIGI 67 (272)
T ss_dssp CEEEEEEC--C--SHHHHHHHHHHHHHHTTSSCEECSSSCSEEEEEESH-HHHHHHHHHTGGGTTTCEEEEE
T ss_pred CEEEEEEC--C--CHHHHHHHHHHHHHHHHCCCEeCCCCCCEEEEEcCc-HHHHHHHHHHhhcCCCCCEEEE
Confidence 36888853 2 345567788899999888763 3444556 9999999888765 6788998
No 64
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=61.16 E-value=53 Score=25.87 Aligned_cols=55 Identities=15% Similarity=0.119 Sum_probs=28.6
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.++|-|.|+++ + ..+++++.|+++|+.|+.-+-..--.+.+.+...+.++.+..+
T Consensus 9 ~k~vlITGas~-g-------iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 63 (253)
T 3qiv_A 9 NKVGIVTGSGG-G-------IGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISV 63 (253)
T ss_dssp TCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEECCCC-h-------HHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEE
Confidence 34566665443 2 3457778888888887655433112223333333445555444
No 65
>3k5w_A Carbohydrate kinase; 11206B,helicobacter pylori,PSI-II, NYSGXRC, , structural genomics, protein structure initiative; 2.60A {Helicobacter pylori}
Probab=61.13 E-value=15 Score=33.46 Aligned_cols=116 Identities=14% Similarity=0.084 Sum_probs=62.7
Q ss_pred HcCCeEEecCCCCChhHHHHHHHHhcC-CeEEEEecCcCCCCCCCCCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcC
Q 028256 48 ERNIDLVYGGGSIGLMGLVSQAVYDGG-RHVLGVIPKTLMPREITGDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYG 126 (211)
Q Consensus 48 ~~g~~lv~GGg~~GlM~a~a~gA~~~g-G~viGv~P~~~~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~G 126 (211)
..|+.+|.||++.|.---++++|++.| |.|.-+.|.........+ .+++.... +.+..|++++=|| .|
T Consensus 235 ~~G~vlvigGs~~GA~~laa~aAlr~GaGlv~~~~~~~~~~~~~~~---pe~m~~~~-------~~~~~~a~~iGPG-lG 303 (475)
T 3k5w_A 235 DYGHAHVLLGKHSGAGLLSALSALSFGSGVVSVQALECEITSNNKP---LELVFCEN-------FPNLLSAFALGMG-LE 303 (475)
T ss_dssp GGCEEEEEECSSHHHHHHHHHHHHHTTCSEEEEEESSSCCSSSSSC---TTSEEESS-------CCSSCSEEEECTT-CS
T ss_pred CCCeEEEEeCCCCcHHHHHHHHHHHhCCCeEEEeccHHHhhcccCC---hhheeehh-------hccCCCEEEEcCC-CC
Confidence 368999999976566666678888887 666666665421110001 12232222 2357888877775 44
Q ss_pred cHH-HHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhh
Q 028256 127 TLE-ELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLE 194 (211)
Q Consensus 127 TL~-El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~ 194 (211)
+-+ ++.+++. .. |++| +-++.+.. .+ . ..++ ...+++.++.|+...+.
T Consensus 304 ~~~~~l~~~l~------~~-p~Vl-DADaL~~~--~~----~--~~~~----~~~VlTPh~~E~~rL~g 352 (475)
T 3k5w_A 304 NIPKDFNRWLE------LA-PCVL-DAGVFYHK--EI----L--QALE----KEAVLTPHPKEFLSLLN 352 (475)
T ss_dssp SCCTTHHHHHH------HS-CEEE-EGGGGGSG--GG----G--TTTT----SSEEEECCHHHHHHHHH
T ss_pred CCHHHHHHHHh------cC-CEEE-ECcccCCc--hh----h--hccC----CCEEECCCHHHHHHHhC
Confidence 322 2322222 24 7754 77666421 10 0 1111 23677888888776654
No 66
>2ph1_A Nucleotide-binding protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; 2.70A {Archaeoglobus fulgidus dsm 4304} PDB: 3kb1_A*
Probab=60.82 E-value=14 Score=29.97 Aligned_cols=46 Identities=13% Similarity=0.140 Sum_probs=30.6
Q ss_pred HHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 7 QQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 7 ~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
+.+.+..+.+.++.|+|+ +...+.... ..|..|+..||++|+.++.
T Consensus 7 ~~~~a~~l~~~~~vI~v~-s~kGGvGKT--T~a~nLA~~la~~G~~Vll 52 (262)
T 2ph1_A 7 DEEIKERLGKIKSRIAVM-SGKGGVGKS--TVTALLAVHYARQGKKVGI 52 (262)
T ss_dssp HHHHHHHHTTCSCEEEEE-CSSSCTTHH--HHHHHHHHHHHHTTCCEEE
T ss_pred hhhhhhhhccCCeEEEEE-cCCCCCCHH--HHHHHHHHHHHHCCCeEEE
Confidence 334444555566677777 445555544 4688999999999987643
No 67
>3q94_A Fructose-bisphosphate aldolase, class II; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta barrel; HET: 13P; 2.30A {Bacillus anthracis} SCOP: c.1.10.0
Probab=60.54 E-value=78 Score=26.85 Aligned_cols=102 Identities=14% Similarity=0.094 Sum_probs=61.9
Q ss_pred eCCCCCCCHHHHHHHHHHHHHHHHcCCeE-----EecCCCCCh---------hHHHHHHHHhcCCeEEEEecCcCCCCCC
Q 028256 25 CGSSPGKSPSYQLAAIQLGKQLVERNIDL-----VYGGGSIGL---------MGLVSQAVYDGGRHVLGVIPKTLMPREI 90 (211)
Q Consensus 25 ggs~~~~~~~~~~~A~~lG~~la~~g~~l-----v~GGg~~Gl---------M~a~a~gA~~~gG~viGv~P~~~~~~e~ 90 (211)
...|.-+-++-.+.++++.+...+.|..| ..||...|+ .+.+.+=+.+.|-..+.|.-... +..
T Consensus 109 iDgS~~p~eeNi~~Tk~vv~~ah~~gvsVEaElG~vgG~Ed~~~~~~~~yT~Peea~~Fv~~TgvD~LAvaiGt~--HG~ 186 (288)
T 3q94_A 109 IDASHHPFEENVETTKKVVEYAHARNVSVEAELGTVGGQEDDVIAEGVIYADPAECKHLVEATGIDCLAPALGSV--HGP 186 (288)
T ss_dssp ECCTTSCHHHHHHHHHHHHHHHHTTTCEEEEEESBCBCSCSSCGGGGCBCCCHHHHHHHHHHHCCSEEEECSSCB--SSC
T ss_pred EeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCcCCccccCCCHHHHHHHHHHHCCCEEEEEcCcc--cCC
Confidence 33333334566688888998888888877 446654453 35555556667766666621110 110
Q ss_pred CCCCCceeeecCCH-HHHHHHHHHhcCEEEEecCCcCcHHHHHHHH
Q 028256 91 TGDTVGEVKAVSGM-HQRKAEMARQADAFIALPGGYGTLEELLEVI 135 (211)
Q Consensus 91 ~~~~~~~~~~~~~~-~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~ 135 (211)
. +. + ..+ ++|...+-+..+.-+||-||+|+-+|-+...
T Consensus 187 Y-~~--~----p~Ld~~~L~~I~~~v~vpLVlHGgSG~~~e~i~~a 225 (288)
T 3q94_A 187 Y-KG--E----PNLGFAEMEQVRDFTGVPLVLHGGTGIPTADIEKA 225 (288)
T ss_dssp C-SS--S----CCCCHHHHHHHHHHHCSCEEECCCTTCCHHHHHHH
T ss_pred c-CC--C----CccCHHHHHHHHHhcCCCEEEeCCCCCCHHHHHHH
Confidence 0 00 0 111 5666666677789999999999988866543
No 68
>4ffl_A PYLC; amino acid, biosynthesis of pyrrolysine, isopeptide bond for ATP-grAsp fold, ligase, ATP-binding, L-lysine and 3R-methyl ornithine; HET: LYS ADP ATP; 1.50A {Methanosarcina barkeri} PDB: 4ffm_A* 4ffn_A* 4ffo_A* 4ffp_A* 4ffr_A*
Probab=60.08 E-value=29 Score=29.37 Aligned_cols=67 Identities=15% Similarity=0.177 Sum_probs=37.4
Q ss_pred EEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCH--HHHHHHHHHhcCEEEEecCC
Q 028256 53 LVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGM--HQRKAEMARQADAFIALPGG 124 (211)
Q Consensus 53 lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~--~~Rk~~m~~~sDa~IvlpGG 124 (211)
++.|||..|.| ++..|++.|=+|+.+-++...+ .....++.+..+.. .+....+.+..|+++...|.
T Consensus 5 ~ilGgg~~g~~--~~~~Ak~~G~~vv~vd~~~~~~---~~~~aD~~~~~~~~~d~~~~~~~~~~~D~v~~~~~~ 73 (363)
T 4ffl_A 5 CLVGGKLQGFE--AAYLSKKAGMKVVLVDKNPQAL---IRNYADEFYCFDVIKEPEKLLELSKRVDAVLPVNEN 73 (363)
T ss_dssp EEECCSHHHHH--HHHHHHHTTCEEEEEESCTTCT---TTTTSSEEEECCTTTCHHHHHHHHTSSSEEEECCCC
T ss_pred EEECCCHHHHH--HHHHHHHCCCEEEEEeCCCCCh---hHhhCCEEEECCCCcCHHHHHHHhcCCCEEEECCCC
Confidence 45566554554 5567889998998885443222 11222334433322 23444456678988776654
No 69
>1nns_A L-asparaginase II; amidrohydrolase, crystallographic comparison hydrolase; 1.95A {Escherichia coli} SCOP: c.88.1.1 PDB: 3eca_A 1ho3_A 1jaz_A 1ihd_A 1jja_A 4eca_A*
Probab=59.82 E-value=19 Score=31.05 Aligned_cols=52 Identities=19% Similarity=0.244 Sum_probs=36.3
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..+..|+|||+.| .-||+|-..+++++- ..+|||||.+.- --.|...+++..
T Consensus 76 ~~~~~dG~VItHG-TDTmeeTA~~Ls~~l--~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 132 (326)
T 1nns_A 76 DCDKTDGFVITHG-TDTMEETAYFLDLTV--KCDKPVVMVGAMRPSTSMSADGPFNLYNA 132 (326)
T ss_dssp HGGGCSEEEEECC-SSSHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred HhhcCCcEEEEcC-chhHHHHHHHHHHhc--CCCCCEEEeCCCCCCcCCCCchHHHHHHH
Confidence 3444599999975 799999999988654 358999998552 123555555543
No 70
>1rzu_A Glycogen synthase 1; glycosyl-transferase, GT-B fold, rossmann fold, ADP-binding, transferase; HET: ADP; 2.30A {Agrobacterium tumefaciens} SCOP: c.87.1.8 PDB: 1rzv_A
Probab=59.57 E-value=85 Score=27.00 Aligned_cols=73 Identities=18% Similarity=0.070 Sum_probs=41.3
Q ss_pred HHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcC----CCCcccccceEE
Q 028256 109 AEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEG----FIAPAARYIIVS 182 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g----~i~~~~~~~i~~ 182 (211)
..+...||++|.-. -|+|. =+.|+++ .++|||..+..|. .+ ++.++ +........++-
T Consensus 360 ~~~~~~adv~v~pS~~E~~~~--~~lEAma------~G~PvI~s~~gg~----~e----~v~~~~~~~~~~~~~~G~l~~ 423 (485)
T 1rzu_A 360 HLMQAGCDAIIIPSRFEPCGL--TQLYALR------YGCIPVVARTGGL----AD----TVIDANHAALASKAATGVQFS 423 (485)
T ss_dssp HHHHHHCSEEEECCSCCSSCS--HHHHHHH------HTCEEEEESSHHH----HH----HCCBCCHHHHHTTCCCBEEES
T ss_pred HHHHhcCCEEEECcccCCCCH--HHHHHHH------CCCCEEEeCCCCh----hh----eecccccccccccCCcceEeC
Confidence 45678999877532 34554 2566676 6899999876432 22 22211 000001223333
Q ss_pred cCCHHHHHHHhhhhc
Q 028256 183 AQTAHELICKLEVFF 197 (211)
Q Consensus 183 ~~d~ee~~~~l~~~~ 197 (211)
..|++++.+.|.+..
T Consensus 424 ~~d~~~la~~i~~ll 438 (485)
T 1rzu_A 424 PVTLDGLKQAIRRTV 438 (485)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 458898888887754
No 71
>3ff4_A Uncharacterized protein; structural genomics, PSI- protein structure initiative, midwest center for structural genomics, MCSG; 2.10A {Cytophaga hutchinsonii atcc 33406}
Probab=59.48 E-value=12 Score=27.61 Aligned_cols=34 Identities=9% Similarity=0.196 Sum_probs=23.5
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
+.+++|+|+|.|..... .+..+-+.|-+.||.|.
T Consensus 2 ~~p~siAVVGaS~~~~~-----~g~~v~~~L~~~g~~V~ 35 (122)
T 3ff4_A 2 NAMKKTLILGATPETNR-----YAYLAAERLKSHGHEFI 35 (122)
T ss_dssp CCCCCEEEETCCSCTTS-----HHHHHHHHHHHHTCCEE
T ss_pred CCCCEEEEEccCCCCCC-----HHHHHHHHHHHCCCeEE
Confidence 56789999976665422 24567777777888764
No 72
>2qzs_A Glycogen synthase; glycosyl-transferase, GT-B fold, rossmann fold, closed-form, ADP and glucose binding, glycogen biosynthesis; HET: GLC ADP 250; 2.20A {Escherichia coli} PDB: 2r4t_A* 2r4u_A* 3guh_A* 3cx4_A* 3cop_A* 3d1j_A
Probab=59.28 E-value=86 Score=26.97 Aligned_cols=73 Identities=14% Similarity=0.095 Sum_probs=42.3
Q ss_pred HHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCC----CCcccccceEE
Q 028256 109 AEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGF----IAPAARYIIVS 182 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~----i~~~~~~~i~~ 182 (211)
..++..||++|.-. .|+|. =+.|+++ .++|||..+..|. .+ ++.++. .+......++-
T Consensus 361 ~~~~~~adv~v~pS~~E~~g~--~~lEAma------~G~PvI~s~~gg~----~e----~v~~~~~~~~~~~~~~G~l~~ 424 (485)
T 2qzs_A 361 HRIMGGADVILVPSRFEPCGL--TQLYGLK------YGTLPLVRRTGGL----AD----TVSDCSLENLADGVASGFVFE 424 (485)
T ss_dssp HHHHHHCSEEEECCSCCSSCS--HHHHHHH------HTCEEEEESSHHH----HH----HCCBCCHHHHHTTCCCBEEEC
T ss_pred HHHHHhCCEEEECCccCCCcH--HHHHHHH------CCCCEEECCCCCc----cc----eeccCccccccccccceEEEC
Confidence 45678899876543 35554 3666776 6899999876432 11 222110 00002233444
Q ss_pred cCCHHHHHHHhhhhc
Q 028256 183 AQTAHELICKLEVFF 197 (211)
Q Consensus 183 ~~d~ee~~~~l~~~~ 197 (211)
.+|++++.+.|.+..
T Consensus 425 ~~d~~~la~~i~~ll 439 (485)
T 2qzs_A 425 DSNAWSLLRAIRRAF 439 (485)
T ss_dssp SSSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 568999888887764
No 73
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=58.03 E-value=41 Score=26.87 Aligned_cols=56 Identities=11% Similarity=0.162 Sum_probs=34.9
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+.+++-|.|+|+ + ..+.+++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 6 ~~k~vlVTGas~-G-------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (252)
T 3h7a_A 6 RNATVAVIGAGD-Y-------IGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVAR 61 (252)
T ss_dssp CSCEEEEECCSS-H-------HHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 345667776554 2 3567888899999998766543333445555555556666555
No 74
>4eg0_A D-alanine--D-alanine ligase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.65A {Burkholderia ambifaria} PDB: 4egq_A 4egj_A
Probab=58.02 E-value=14 Score=30.75 Aligned_cols=44 Identities=16% Similarity=0.101 Sum_probs=31.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIG 61 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~G 61 (211)
+++|+|.+|......+.-...++++.+.|.+.||.++.=....+
T Consensus 13 ~~~v~vl~gg~s~E~~vsl~s~~~v~~al~~~g~~v~~i~~~~~ 56 (317)
T 4eg0_A 13 FGKVAVLFGGESAEREVSLTSGRLVLQGLRDAGIDAHPFDPAER 56 (317)
T ss_dssp GCEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEECTTTS
T ss_pred cceEEEEECCCCCcceeeHHHHHHHHHHHHHCCCEEEEEeCCCc
Confidence 46788888866544444356889999999999998865443334
No 75
>2bfw_A GLGA glycogen synthase; glycosyltransferase family 5 UDP/ADP-glucose-glycogen syntha rossman folds, transferase; 1.8A {Pyrococcus abyssi} SCOP: c.87.1.8
Probab=58.01 E-value=30 Score=25.83 Aligned_cols=69 Identities=22% Similarity=0.125 Sum_probs=42.0
Q ss_pred HHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCC
Q 028256 108 KAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 185 (211)
Q Consensus 108 k~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d 185 (211)
...++..||++|... .|+|+ =++|+++ .++|||..+..+ +.+ + + ......++-.+|
T Consensus 109 ~~~~~~~ad~~l~ps~~e~~~~--~~~Ea~a------~G~PvI~~~~~~----~~e----~-----~-~~~~g~~~~~~~ 166 (200)
T 2bfw_A 109 VRELYGSVDFVIIPSYFEPFGL--VALEAMC------LGAIPIASAVGG----LRD----I-----I-TNETGILVKAGD 166 (200)
T ss_dssp HHHHHTTCSEEEECCSCCSSCH--HHHHHHH------TTCEEEEESCHH----HHH----H-----C-CTTTCEEECTTC
T ss_pred HHHHHHHCCEEEECCCCCCccH--HHHHHHH------CCCCEEEeCCCC----hHH----H-----c-CCCceEEecCCC
Confidence 445678899888743 24443 3677777 799999876532 222 1 1 112223344469
Q ss_pred HHHHHHHhhhhcc
Q 028256 186 AHELICKLEVFFF 198 (211)
Q Consensus 186 ~ee~~~~l~~~~~ 198 (211)
++++.+.|.+...
T Consensus 167 ~~~l~~~i~~l~~ 179 (200)
T 2bfw_A 167 PGELANAILKALE 179 (200)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999988877643
No 76
>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*
Probab=55.26 E-value=59 Score=23.79 Aligned_cols=74 Identities=15% Similarity=0.144 Sum_probs=34.7
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC-CCCCceeeecC--CHHHHHHHHHHhcCEEEEecCCcC
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT-GDTVGEVKAVS--GMHQRKAEMARQADAFIALPGGYG 126 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~-~~~~~~~~~~~--~~~~Rk~~m~~~sDa~IvlpGG~G 126 (211)
...+|.|+|..|. .+++...+.|-.|+.+-.+........ .... ..+..+ +...-+..-+..+|++|+.-+...
T Consensus 20 ~~v~IiG~G~iG~--~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~-~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~ 96 (155)
T 2g1u_A 20 KYIVIFGCGRLGS--LIANLASSSGHSVVVVDKNEYAFHRLNSEFSG-FTVVGDAAEFETLKECGMEKADMVFAFTNDDS 96 (155)
T ss_dssp CEEEEECCSHHHH--HHHHHHHHTTCEEEEEESCGGGGGGSCTTCCS-EEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred CcEEEECCCHHHH--HHHHHHHhCCCeEEEEECCHHHHHHHHhcCCC-cEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence 3456777655443 345555566777777744322111111 1111 222222 221111112467899988877543
No 77
>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A
Probab=54.64 E-value=15 Score=31.20 Aligned_cols=154 Identities=10% Similarity=0.008 Sum_probs=73.7
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCCC-CCCceeee--cCCHHHHHHHHHH--hcCEEEEecC
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREITG-DTVGEVKA--VSGMHQRKAEMAR--QADAFIALPG 123 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~~-~~~~~~~~--~~~~~~Rk~~m~~--~sDa~IvlpG 123 (211)
...+|+|+|+.|++ +..-|+..|. +|+++-++.. ..+... -..+.++. ..++.++-..+.. ..|+++-..|
T Consensus 168 ~~VlV~GaG~vG~~--a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~v~~~t~g~g~D~v~d~~g 244 (352)
T 3fpc_A 168 DTVCVIGIGPVGLM--SVAGANHLGAGRIFAVGSRKH-CCDIALEYGATDIINYKNGDIVEQILKATDGKGVDKVVIAGG 244 (352)
T ss_dssp CCEEEECCSHHHHH--HHHHHHTTTCSSEEEECCCHH-HHHHHHHHTCCEEECGGGSCHHHHHHHHTTTCCEEEEEECSS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCcEEEEECCCHH-HHHHHHHhCCceEEcCCCcCHHHHHHHHcCCCCCCEEEECCC
Confidence 34568876544443 4455667776 7888743221 001100 01122222 2344444333322 2577777777
Q ss_pred CcCcHHHHHHHHHH----HHhCCC--CCcE--------------EEEeCCcc-chhHHHHHHHHHHcCCCCcccc-cceE
Q 028256 124 GYGTLEELLEVITW----AQLGIH--DKPV--------------GLLNVDGY-YNSLLSFIDKAVDEGFIAPAAR-YIIV 181 (211)
Q Consensus 124 G~GTL~El~~~~~~----~~lg~~--~kPi--------------ill~~~g~-~~~l~~~l~~~~~~g~i~~~~~-~~i~ 181 (211)
+..++++.+..+.- ..+|.. ..++ -+.....+ ....+..+-.++.+|-++.... ...+
T Consensus 245 ~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~ 324 (352)
T 3fpc_A 245 DVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYKRVDPSKLVTHVF 324 (352)
T ss_dssp CTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTTSCCGGGGEEEEE
T ss_pred ChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcCCCChhHhheeeC
Confidence 77777777654420 011211 1111 11111000 0122333445777888876532 3445
Q ss_pred E-cCCHHHHHHHhhhhccC-ceeEEee
Q 028256 182 S-AQTAHELICKLEVFFFF-FFWLFSF 206 (211)
Q Consensus 182 ~-~~d~ee~~~~l~~~~~~-~~~~~~~ 206 (211)
- .++.+++++.+.+-... .+-..+|
T Consensus 325 ~gl~~~~~A~~~~~~~~~~~~Kvvi~~ 351 (352)
T 3fpc_A 325 RGFDNIEKAFMLMKDKPKDLIKPVVIL 351 (352)
T ss_dssp ESTTHHHHHHHHHHSCCTTCSEEEEEC
T ss_pred CCHHHHHHHHHHHHhCCCCcEEEEEEe
Confidence 5 78888888888764332 3444444
No 78
>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}
Probab=53.96 E-value=33 Score=29.71 Aligned_cols=30 Identities=30% Similarity=0.493 Sum_probs=20.2
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P 82 (211)
..||+|+|..|++ +..-|+..|. +|+++-.
T Consensus 216 ~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~ 246 (404)
T 3ip1_A 216 NVVILGGGPIGLA--AVAILKHAGASKVILSEP 246 (404)
T ss_dssp EEEEECCSHHHHH--HHHHHHHTTCSEEEEECS
T ss_pred EEEEECCCHHHHH--HHHHHHHcCCCEEEEECC
Confidence 4568887655544 5566777887 8888743
No 79
>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*
Probab=53.62 E-value=44 Score=27.94 Aligned_cols=30 Identities=23% Similarity=0.172 Sum_probs=20.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
..||+|+|..|++ +..-|+..|.+|+++..
T Consensus 169 ~VlV~GaG~vG~~--a~qla~~~Ga~Vi~~~~ 198 (340)
T 3s2e_A 169 WVVISGIGGLGHV--AVQYARAMGLRVAAVDI 198 (340)
T ss_dssp EEEEECCSTTHHH--HHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHHH--HHHHHHHCCCeEEEEeC
Confidence 4567777655544 45667778889999854
No 80
>1vgv_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, isomerase; HET: UD1; 2.31A {Escherichia coli} SCOP: c.87.1.3 PDB: 1f6d_A*
Probab=53.45 E-value=94 Score=25.60 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=39.3
Q ss_pred HHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC-CccchhHHHHHHHHHHcCCCCcccccceEEcCC
Q 028256 107 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV-DGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 185 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~-~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d 185 (211)
....++..||++|. |. |++ +.|+++ .++|++..+. .| ...+ ++.| .-+.+-.|
T Consensus 275 ~~~~~~~~ad~~v~-~S--g~~--~lEA~a------~G~PvI~~~~~~~-~~e~-------v~~g-------~g~lv~~d 328 (384)
T 1vgv_A 275 PFVWLMNHAWLILT-DS--GGI--QEEAPS------LGKPVLVMRDTTE-RPEA-------VTAG-------TVRLVGTD 328 (384)
T ss_dssp HHHHHHHHCSEEEE-SS--STG--GGTGGG------GTCCEEEESSCCS-CHHH-------HHHT-------SEEEECSS
T ss_pred HHHHHHHhCcEEEE-CC--cch--HHHHHH------cCCCEEEccCCCC-cchh-------hhCC-------ceEEeCCC
Confidence 44567789998765 54 333 556666 6899999865 43 2332 2222 11333348
Q ss_pred HHHHHHHhhhhc
Q 028256 186 AHELICKLEVFF 197 (211)
Q Consensus 186 ~ee~~~~l~~~~ 197 (211)
++++.+.|.+..
T Consensus 329 ~~~la~~i~~ll 340 (384)
T 1vgv_A 329 KQRIVEEVTRLL 340 (384)
T ss_dssp HHHHHHHHHHHH
T ss_pred HHHHHHHHHHHH
Confidence 888888887654
No 81
>2jjm_A Glycosyl transferase, group 1 family protein; anthrax, nucleotide, carbohydrate; 3.10A {Bacillus anthracis} PDB: 3mbo_A*
Probab=52.60 E-value=46 Score=27.83 Aligned_cols=67 Identities=16% Similarity=0.192 Sum_probs=41.5
Q ss_pred HHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCHH
Q 028256 110 EMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAH 187 (211)
Q Consensus 110 ~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~e 187 (211)
.++..||++|.-. .|+|+ =+.|+++ .++|||..+..|.-+ ++.......+.-.+|++
T Consensus 280 ~~~~~adv~v~ps~~e~~~~--~~~EAma------~G~PvI~~~~~~~~e-------------~v~~~~~g~~~~~~d~~ 338 (394)
T 2jjm_A 280 ELLAMSDLMLLLSEKESFGL--VLLEAMA------CGVPCIGTRVGGIPE-------------VIQHGDTGYLCEVGDTT 338 (394)
T ss_dssp HHHHTCSEEEECCSCCSCCH--HHHHHHH------TTCCEEEECCTTSTT-------------TCCBTTTEEEECTTCHH
T ss_pred HHHHhCCEEEeccccCCCch--HHHHHHh------cCCCEEEecCCChHH-------------HhhcCCceEEeCCCCHH
Confidence 4678899877542 34454 3667777 799999988754322 12222223333345899
Q ss_pred HHHHHhhhhc
Q 028256 188 ELICKLEVFF 197 (211)
Q Consensus 188 e~~~~l~~~~ 197 (211)
++.+.|.+..
T Consensus 339 ~la~~i~~l~ 348 (394)
T 2jjm_A 339 GVADQAIQLL 348 (394)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 9888887654
No 82
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=52.57 E-value=11 Score=32.17 Aligned_cols=42 Identities=29% Similarity=0.442 Sum_probs=27.6
Q ss_pred HHHHHHHHcCC-eEEecCCCCChhHHHHHHHHhcC-CeEEEEecC
Q 028256 41 QLGKQLVERNI-DLVYGGGSIGLMGLVSQAVYDGG-RHVLGVIPK 83 (211)
Q Consensus 41 ~lG~~la~~g~-~lv~GGg~~GlM~a~a~gA~~~g-G~viGv~P~ 83 (211)
++.+.++..++ .||..||. |.+-.++++..+.+ ...+|++|-
T Consensus 71 ~~~~~~~~~~~d~vvv~GGD-GTv~~v~~~l~~~~~~~pl~iIP~ 114 (337)
T 2qv7_A 71 LEAERAMHENYDVLIAAGGD-GTLNEVVNGIAEKPNRPKLGVIPM 114 (337)
T ss_dssp HHHHHHTTTTCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHhhcCCCEEEEEcCc-hHHHHHHHHHHhCCCCCcEEEecC
Confidence 34444444554 34555566 99999999986543 567899884
No 83
>2c1x_A UDP-glucose flavonoid 3-O glycosyltransferase; WINE, catalysis, glycosylation; HET: UDP B3P; 1.9A {Vitis vinifera} SCOP: c.87.1.10 PDB: 2c1z_A* 2c9z_A*
Probab=52.13 E-value=27 Score=30.94 Aligned_cols=40 Identities=15% Similarity=0.072 Sum_probs=25.6
Q ss_pred EEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHc
Q 028256 118 FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDE 169 (211)
Q Consensus 118 ~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~ 169 (211)
+++--||.||..|... +++|++++-. +.|...+ .+.+.+.
T Consensus 346 ~fvth~G~~S~~Eal~---------~GvP~i~~P~--~~dQ~~N-a~~l~~~ 385 (456)
T 2c1x_A 346 AFVTHCGWNSLWESVA---------GGVPLICRPF--FGDQRLN-GRMVEDV 385 (456)
T ss_dssp EEEECCCHHHHHHHHH---------HTCCEEECCC--STTHHHH-HHHHHHT
T ss_pred EEEecCCcchHHHHHH---------hCceEEecCC--hhhHHHH-HHHHHHH
Confidence 5566889999887753 6899998743 4454432 2344444
No 84
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=52.06 E-value=15 Score=31.34 Aligned_cols=43 Identities=23% Similarity=0.415 Sum_probs=26.9
Q ss_pred HHHHHHHHcCC-eEEecCCCCChhHHHHHHHHhc---CCeEEEEecCc
Q 028256 41 QLGKQLVERNI-DLVYGGGSIGLMGLVSQAVYDG---GRHVLGVIPKT 84 (211)
Q Consensus 41 ~lG~~la~~g~-~lv~GGg~~GlM~a~a~gA~~~---gG~viGv~P~~ 84 (211)
++.+.++..++ .||.-||. |.+-.++++..+. ....+|++|..
T Consensus 73 ~~~~~~~~~~~d~vvv~GGD-GTl~~v~~~l~~~~~~~~~plgiiP~G 119 (332)
T 2bon_A 73 RYVEEARKFGVATVIAGGGD-GTINEVSTALIQCEGDDIPALGILPLG 119 (332)
T ss_dssp HHHHHHHHHTCSEEEEEESH-HHHHHHHHHHHHCCSSCCCEEEEEECS
T ss_pred HHHHHHHhcCCCEEEEEccc-hHHHHHHHHHhhcccCCCCeEEEecCc
Confidence 33444444454 34444556 9999999998843 24568998843
No 85
>2b69_A UDP-glucuronate decarboxylase 1; UDP-glucoronic acid decarboxylase, structural genomics, STRU genomics consortium, SGC, lyase; HET: MSE NAD UDP; 1.21A {Homo sapiens} SCOP: c.2.1.2 PDB: 4ef7_A*
Probab=51.02 E-value=18 Score=30.00 Aligned_cols=44 Identities=11% Similarity=0.153 Sum_probs=22.3
Q ss_pred hHHHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 4 QQQQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 4 ~~~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++++.+.+......+++|.|.|++.. ....|.+.|.++|+.|+.
T Consensus 13 ~~~~~~~~~~~~~~~~~vlVtGatG~--------iG~~l~~~L~~~g~~V~~ 56 (343)
T 2b69_A 13 GRENLYFQGHMEKDRKRILITGGAGF--------VGSHLTDKLMMDGHEVTV 56 (343)
T ss_dssp --------------CCEEEEETTTSH--------HHHHHHHHHHHTTCEEEE
T ss_pred cccccccccccccCCCEEEEEcCccH--------HHHHHHHHHHHCCCEEEE
Confidence 45555555555566788999976552 346778888888988764
No 86
>2ark_A Flavodoxin; FMN, structural genomics, PSI, structure initiative, midwest center for structural genomic electron transport; 2.40A {Aquifex aeolicus} SCOP: c.23.5.8
Probab=50.81 E-value=10 Score=29.20 Aligned_cols=35 Identities=11% Similarity=0.167 Sum_probs=22.2
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHH-cCCeE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVE-RNIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~-~g~~l 53 (211)
+.|++|.|+.+|..++ -.+.|+.+.+.+.+ .|+.+
T Consensus 2 ~~M~kiliiy~S~~Gn---T~~~a~~i~~~l~~~~g~~v 37 (188)
T 2ark_A 2 NAMGKVLVIYDTRTGN---TKKMAELVAEGARSLEGTEV 37 (188)
T ss_dssp CCCEEEEEEECCSSSH---HHHHHHHHHHHHHTSTTEEE
T ss_pred CCCCEEEEEEECCCcH---HHHHHHHHHHHHhhcCCCeE
Confidence 4577787777876542 23567777777766 55443
No 87
>1wls_A L-asparaginase; structural genomics, hydrolase; 2.16A {Pyrococcus horikoshii} PDB: 1wnf_A
Probab=50.75 E-value=22 Score=30.66 Aligned_cols=51 Identities=10% Similarity=0.079 Sum_probs=35.5
Q ss_pred HhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 113 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 113 ~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
+..|+|||+.| .-||+|-..+++++-. ..+|||||.+.- --.|...++++.
T Consensus 72 ~~~dG~VItHG-TDTmeeTA~~Ls~ll~-~~~kPVVlTGAqrP~~~~~sDg~~NL~~A 127 (328)
T 1wls_A 72 WEYDGIVITHG-TDTMAYSASMLSFMLR-NPPIPIVLTGSMLPITEKNSDAPFNLRTA 127 (328)
T ss_dssp TTCSEEEEECC-GGGHHHHHHHHHHHEE-SCSSEEEEECCSSCTTSSSCSHHHHHHHH
T ss_pred ccCCeEEEEcC-CchHHHHHHHHHHHHh-CCCCCEEEECCCCCCCCCCCchHHHHHHH
Confidence 45799999975 7999999988774332 357999997652 134556666554
No 88
>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*
Probab=50.41 E-value=48 Score=27.59 Aligned_cols=43 Identities=7% Similarity=-0.134 Sum_probs=27.3
Q ss_pred HHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhccCceeEEe
Q 028256 162 FIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFFFFFFWLFS 205 (211)
Q Consensus 162 ~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~ 205 (211)
.+-.++.+|-++.. ....+-.++.+++++.+.+-....+-..+
T Consensus 289 ~~~~l~~~g~l~~~-i~~~~~l~~~~~A~~~~~~~~~~gKvvi~ 331 (334)
T 3qwb_A 289 EFFGLVNSKKLNIK-IYKTYPLRDYRTAAADIESRKTVGKLVLE 331 (334)
T ss_dssp HHHHHHHTTSSCCC-EEEEEEGGGHHHHHHHHHTTCCCBEEEEE
T ss_pred HHHHHHHCCCccCc-eeeEEcHHHHHHHHHHHHhCCCceEEEEe
Confidence 34456778888765 33445578889999888765443343333
No 89
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=49.63 E-value=49 Score=27.63 Aligned_cols=31 Identities=29% Similarity=0.400 Sum_probs=23.4
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
++..+|+| +-.||.||..|.. . +++|++++-
T Consensus 301 lL~~~~~~-v~h~G~~s~~Eal---~------~GvP~v~~P 331 (400)
T 4amg_A 301 LLETCDAI-IHHGGSGTLLTAL---A------AGVPQCVIP 331 (400)
T ss_dssp HHTTCSEE-EECCCHHHHHHHH---H------HTCCEEECC
T ss_pred Hhhhhhhe-eccCCccHHHHHH---H------hCCCEEEec
Confidence 45778875 5689999987764 3 689999874
No 90
>2acv_A Triterpene UDP-glucosyl transferase UGT71G1; glycosyltransferase; HET: UDP; 2.00A {Medicago truncatula} SCOP: c.87.1.10 PDB: 2acw_A*
Probab=48.99 E-value=24 Score=31.35 Aligned_cols=106 Identities=14% Similarity=0.100 Sum_probs=56.5
Q ss_pred HHHHHHHHH---cCCeEEecCCCCC------hhHHHHHHHHhcCCeEEEEecCc--CCCCCCCCCC--CceeeecCCHHH
Q 028256 40 IQLGKQLVE---RNIDLVYGGGSIG------LMGLVSQAVYDGGRHVLGVIPKT--LMPREITGDT--VGEVKAVSGMHQ 106 (211)
Q Consensus 40 ~~lG~~la~---~g~~lv~GGg~~G------lM~a~a~gA~~~gG~viGv~P~~--~~~~e~~~~~--~~~~~~~~~~~~ 106 (211)
.++-++|.+ +...+|++|+. | .+..++++..+.+-+++=++... ..+.+..... -....+.+....
T Consensus 264 ~~~~~wl~~~~~~~vv~vs~GS~-~~~~~~~~~~~~~~~l~~~~~~~l~~~~~~~~~l~~~~~~~~~~~~~~~v~~w~pq 342 (463)
T 2acv_A 264 DLILKWLDEQPDKSVVFLCFGSM-GVSFGPSQIREIALGLKHSGVRFLWSNSAEKKVFPEGFLEWMELEGKGMICGWAPQ 342 (463)
T ss_dssp HHHHHHHHTSCTTCEEEEECCSS-CCCCCHHHHHHHHHHHHHHTCEEEEECCCCGGGSCTTHHHHHHHHCSEEEESSCCH
T ss_pred hhHHHHHhcCCCCceEEEEeccc-cccCCHHHHHHHHHHHHhCCCcEEEEECCCcccCChhHHHhhccCCCEEEEccCCH
Confidence 356677764 34666777764 6 25666666666666666655431 1111100000 011233333332
Q ss_pred HHHHHHH-hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhH
Q 028256 107 RKAEMAR-QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSL 159 (211)
Q Consensus 107 Rk~~m~~-~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l 159 (211)
..+|.. .+| .++--||.||..|.. . +++|++++-. +.|..
T Consensus 343 -~~vL~h~~~~-~fvth~G~~s~~Eal---~------~GvP~i~~P~--~~dQ~ 383 (463)
T 2acv_A 343 -VEVLAHKAIG-GFVSHCGWNSILESM---W------FGVPILTWPI--YAEQQ 383 (463)
T ss_dssp -HHHHHSTTEE-EEEECCCHHHHHHHH---H------TTCCEEECCC--STTHH
T ss_pred -HHHhCCCccC-eEEecCCchhHHHHH---H------cCCCeeeccc--hhhhH
Confidence 233332 333 566789999988775 3 7999999843 44553
No 91
>2iw1_A Lipopolysaccharide core biosynthesis protein RFAG; transferase, lipopolysaccharide biosynthesis, family GT-4, glycosyltransferase, LPS; HET: U2F; 1.5A {Escherichia coli} SCOP: c.87.1.8 PDB: 2iv7_A*
Probab=48.73 E-value=56 Score=26.75 Aligned_cols=67 Identities=28% Similarity=0.288 Sum_probs=41.3
Q ss_pred HHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEE--cC
Q 028256 109 AEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS--AQ 184 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~--~~ 184 (211)
..++..||++|.-. .|+|+ =+.|+++ .++||+..+..|..+-+. +- ..| +.+ ..
T Consensus 265 ~~~~~~ad~~v~ps~~e~~~~--~~~Ea~a------~G~Pvi~~~~~~~~e~i~----~~-~~g---------~~~~~~~ 322 (374)
T 2iw1_A 265 SELMAAADLLLHPAYQEAAGI--VLLEAIT------AGLPVLTTAVCGYAHYIA----DA-NCG---------TVIAEPF 322 (374)
T ss_dssp HHHHHHCSEEEECCSCCSSCH--HHHHHHH------HTCCEEEETTSTTTHHHH----HH-TCE---------EEECSSC
T ss_pred HHHHHhcCEEEeccccCCccc--HHHHHHH------CCCCEEEecCCCchhhhc----cC-Cce---------EEeCCCC
Confidence 44678899877643 34454 3666676 689999988765433221 11 111 233 34
Q ss_pred CHHHHHHHhhhhc
Q 028256 185 TAHELICKLEVFF 197 (211)
Q Consensus 185 d~ee~~~~l~~~~ 197 (211)
|++++.+.|.+..
T Consensus 323 ~~~~l~~~i~~l~ 335 (374)
T 2iw1_A 323 SQEQLNEVLRKAL 335 (374)
T ss_dssp CHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHH
Confidence 8899888887764
No 92
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=48.09 E-value=43 Score=27.23 Aligned_cols=55 Identities=18% Similarity=0.171 Sum_probs=31.4
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+++-|.|+|+ + ..+++++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 24 ~k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 78 (279)
T 3sju_A 24 PQTAFVTGVSS-G-------IGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGS 78 (279)
T ss_dssp -CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 35666666544 2 3467888888999998755433222333334344456666555
No 93
>3s40_A Diacylglycerol kinase; structural genomics, the center for structural genomics of infectious diseases, csgid, transfer; 2.10A {Bacillus anthracis} PDB: 3t5p_A
Probab=48.05 E-value=14 Score=31.02 Aligned_cols=42 Identities=17% Similarity=0.247 Sum_probs=28.2
Q ss_pred HHHHHHHHHcCC-eEEecCCCCChhHHHHHHHHhc-CCeEEEEecC
Q 028256 40 IQLGKQLVERNI-DLVYGGGSIGLMGLVSQAVYDG-GRHVLGVIPK 83 (211)
Q Consensus 40 ~~lG~~la~~g~-~lv~GGg~~GlM~a~a~gA~~~-gG~viGv~P~ 83 (211)
.++++.+++ ++ .||..||. |.+..++.+.... ....+|++|.
T Consensus 54 ~~~~~~~~~-~~d~vv~~GGD-GTl~~v~~~l~~~~~~~~l~iiP~ 97 (304)
T 3s40_A 54 TKYCQEFAS-KVDLIIVFGGD-GTVFECTNGLAPLEIRPTLAIIPG 97 (304)
T ss_dssp HHHHHHHTT-TCSEEEEEECH-HHHHHHHHHHTTCSSCCEEEEEEC
T ss_pred HHHHHHhhc-CCCEEEEEccc-hHHHHHHHHHhhCCCCCcEEEecC
Confidence 344555544 43 45555566 9999999988763 3578999994
No 94
>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}
Probab=47.86 E-value=56 Score=23.27 Aligned_cols=37 Identities=8% Similarity=-0.101 Sum_probs=19.3
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
+..+|++|+..+-.-+ -+..+....+++ ...|+....
T Consensus 68 ~~~~d~vi~~~~~~~~--n~~~~~~a~~~~--~~~iia~~~ 104 (141)
T 3llv_A 68 LEGVSAVLITGSDDEF--NLKILKALRSVS--DVYAIVRVS 104 (141)
T ss_dssp CTTCSEEEECCSCHHH--HHHHHHHHHHHC--CCCEEEEES
T ss_pred cccCCEEEEecCCHHH--HHHHHHHHHHhC--CceEEEEEc
Confidence 4578998888773221 122233344555 345555433
No 95
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=47.76 E-value=1.3e+02 Score=25.69 Aligned_cols=66 Identities=15% Similarity=0.184 Sum_probs=38.6
Q ss_pred HHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCH
Q 028256 107 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTA 186 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ 186 (211)
....++..||++| .+-| |+. .|+.+ .++|+++.+..+-+..+ ++.|. .+.+-+|+
T Consensus 300 ~~~~l~~~ad~vv-~~SG-g~~---~EA~a------~G~PvV~~~~~~~~~e~-------v~~G~-------~~lv~~d~ 354 (396)
T 3dzc_A 300 PFVYLMDRAHIIL-TDSG-GIQ---EEAPS------LGKPVLVMRETTERPEA-------VAAGT-------VKLVGTNQ 354 (396)
T ss_dssp HHHHHHHHCSEEE-ESCS-GGG---TTGGG------GTCCEEECCSSCSCHHH-------HHHTS-------EEECTTCH
T ss_pred HHHHHHHhcCEEE-ECCc-cHH---HHHHH------cCCCEEEccCCCcchHH-------HHcCc-------eEEcCCCH
Confidence 3456788999875 4434 444 34444 68999998333334332 23332 13334578
Q ss_pred HHHHHHhhhhc
Q 028256 187 HELICKLEVFF 197 (211)
Q Consensus 187 ee~~~~l~~~~ 197 (211)
+++.+.+.+..
T Consensus 355 ~~l~~ai~~ll 365 (396)
T 3dzc_A 355 QQICDALSLLL 365 (396)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHH
Confidence 98888887654
No 96
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=47.59 E-value=66 Score=27.13 Aligned_cols=71 Identities=20% Similarity=0.237 Sum_probs=42.3
Q ss_pred HHHHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEc
Q 028256 106 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 183 (211)
Q Consensus 106 ~Rk~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 183 (211)
+....++..||++|.-. .|+|+ =++|+++ .++|||..+..|.-+ ++. ......+.-.
T Consensus 317 ~~~~~~~~~adv~v~ps~~e~~~~--~~~Eama------~G~PvI~~~~~~~~e--------~i~-----~~~~g~~~~~ 375 (438)
T 3c48_A 317 SELVAVYRAADIVAVPSFNESFGL--VAMEAQA------SGTPVIAARVGGLPI--------AVA-----EGETGLLVDG 375 (438)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCH--HHHHHHH------TTCCEEEESCTTHHH--------HSC-----BTTTEEEESS
T ss_pred HHHHHHHHhCCEEEECccccCCch--HHHHHHH------cCCCEEecCCCChhH--------Hhh-----CCCcEEECCC
Confidence 34455678999876542 24453 3566776 799999987654321 111 1112223334
Q ss_pred CCHHHHHHHhhhhc
Q 028256 184 QTAHELICKLEVFF 197 (211)
Q Consensus 184 ~d~ee~~~~l~~~~ 197 (211)
+|++++.+.|.+..
T Consensus 376 ~d~~~la~~i~~l~ 389 (438)
T 3c48_A 376 HSPHAWADALATLL 389 (438)
T ss_dssp CCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 58999888887654
No 97
>2him_A L-asparaginase 1; hydrolase; 1.82A {Escherichia coli} PDB: 2p2d_A 2p2n_A 3ntx_A* 2ocd_A
Probab=47.56 E-value=36 Score=29.76 Aligned_cols=53 Identities=15% Similarity=0.199 Sum_probs=35.9
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..+..|+|||+-| .-||+|-..+++++- ...+|||||.+.- --.|...+++..
T Consensus 98 ~~~~~dG~VItHG-TDTmeeTA~~Ls~~l-~~~~kPVVlTGAmrP~~~~~sDg~~NL~~A 155 (358)
T 2him_A 98 HYDDYDGFVILHG-TDTMAYTASALSFML-ENLGKPVIVTGSQIPLAELRSDGQINLLNA 155 (358)
T ss_dssp HGGGCSEEEEECC-STTHHHHHHHHHHHE-ETCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred HHhcCCeEEEecC-chHHHHHHHHHHHHH-hcCCCCEEEeCCCCCCcCCCcchHHHHHHH
Confidence 3346799999975 799999998887643 2247999997652 124555555543
No 98
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=47.47 E-value=1.2e+02 Score=25.15 Aligned_cols=69 Identities=19% Similarity=0.101 Sum_probs=43.1
Q ss_pred HHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCC
Q 028256 108 KAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQT 185 (211)
Q Consensus 108 k~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d 185 (211)
...++..||++|.-. .|+|. =+.|+++ .++||+..+..|. .+ ++ ... ...++-.+|
T Consensus 324 ~~~~~~~adv~v~ps~~e~~~~--~~~EAma------~G~Pvi~s~~~~~----~e----~~-----~~~-~g~~~~~~d 381 (439)
T 3fro_A 324 VRELYGSVDFVIIPSYFEPFGL--VALEAMC------LGAIPIASAVGGL----RD----II-----TNE-TGILVKAGD 381 (439)
T ss_dssp HHHHHTTCSEEEECBSCCSSCH--HHHHHHH------TTCEEEEESSTHH----HH----HC-----CTT-TCEEECTTC
T ss_pred HHHHHHHCCEEEeCCCCCCccH--HHHHHHH------CCCCeEEcCCCCc----ce----eE-----EcC-ceEEeCCCC
Confidence 344678899877543 34554 3777787 7999999876432 22 11 111 223444469
Q ss_pred HHHHHHHhhhhcc
Q 028256 186 AHELICKLEVFFF 198 (211)
Q Consensus 186 ~ee~~~~l~~~~~ 198 (211)
++++.+.|.+...
T Consensus 382 ~~~la~~i~~ll~ 394 (439)
T 3fro_A 382 PGELANAILKALE 394 (439)
T ss_dssp HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHh
Confidence 9999998887643
No 99
>3okp_A GDP-mannose-dependent alpha-(1-6)-phosphatidylino monomannoside mannosyltransferase...; GT-B fold, alpha-mannosyltransferase; HET: GDD; 2.00A {Corynebacterium glutamicum} PDB: 3okc_A* 3oka_A*
Probab=46.81 E-value=64 Score=26.54 Aligned_cols=71 Identities=23% Similarity=0.189 Sum_probs=43.7
Q ss_pred HHHHHHHHhcCEEEEec---------CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCccc
Q 028256 106 QRKAEMARQADAFIALP---------GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAA 176 (211)
Q Consensus 106 ~Rk~~m~~~sDa~Ivlp---------GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~ 176 (211)
+....++..||++|... .|+|+ =+.|+++ .++||+..+..+.- ++ +...
T Consensus 264 ~~~~~~~~~ad~~v~ps~~~~~~~~~e~~~~--~~~Ea~a------~G~PvI~~~~~~~~-e~------------i~~~- 321 (394)
T 3okp_A 264 QDMINTLAAADIFAMPARTRGGGLDVEGLGI--VYLEAQA------CGVPVIAGTSGGAP-ET------------VTPA- 321 (394)
T ss_dssp HHHHHHHHHCSEEEECCCCBGGGTBCCSSCH--HHHHHHH------TTCCEEECSSTTGG-GG------------CCTT-
T ss_pred HHHHHHHHhCCEEEecCccccccccccccCc--HHHHHHH------cCCCEEEeCCCChH-HH------------HhcC-
Confidence 34445678899887742 45554 4667777 79999997765432 21 2222
Q ss_pred ccceEEcCCHHHHHHHhhhhcc
Q 028256 177 RYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 177 ~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
...++-.+|++++.+.|.+...
T Consensus 322 ~g~~~~~~d~~~l~~~i~~l~~ 343 (394)
T 3okp_A 322 TGLVVEGSDVDKLSELLIELLD 343 (394)
T ss_dssp TEEECCTTCHHHHHHHHHHHHT
T ss_pred CceEeCCCCHHHHHHHHHHHHh
Confidence 2223334589998888877643
No 100
>3ek6_A Uridylate kinase; UMPK unique GTP B site, allosteric regulation, ATP-binding, nucleotid binding, pyrimidine biosynthesis, transferase; 2.34A {Xanthomonas campestris PV} SCOP: c.73.1.0 PDB: 3ek5_A
Probab=46.70 E-value=1.1e+02 Score=24.65 Aligned_cols=49 Identities=20% Similarity=0.257 Sum_probs=27.7
Q ss_pred HHHHHHHhcCEEEEecCC---cCcHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 107 RKAEMARQADAFIALPGG---YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG---~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
|-..+++.....|+-||. +++-|.+...++ ..++. .+-+++-+++|.|+
T Consensus 121 ~~~~lL~~g~IpVv~~~~g~~~~~~D~~Aa~lA-~~l~A-d~li~lTdVdGvy~ 172 (243)
T 3ek6_A 121 RAIRHLEKGRIAIFAAGTGNPFFTTDSGAALRA-IEIGA-DLLLKATKVDGVYD 172 (243)
T ss_dssp HHHHHHHTTCEEEEESTTSSTTCCHHHHHHHHH-HHHTC-SEEEEECSSSSCBS
T ss_pred HHHHHHHCCcEEEEECCCCCCcCChHHHHHHHH-HHcCC-CEEEEEeCCCccCC
Confidence 334455555555544432 577788776554 33332 34445558899886
No 101
>3nxk_A Cytoplasmic L-asparaginase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; 2.40A {Campylobacter jejuni subsp}
Probab=46.09 E-value=41 Score=29.12 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=34.5
Q ss_pred HhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHH
Q 028256 113 RQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFID 164 (211)
Q Consensus 113 ~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~ 164 (211)
...|+|||+.| .-||+|-...++++- ..+|||||.+.- --.|...+++.
T Consensus 87 ~~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~ 140 (334)
T 3nxk_A 87 EGIDGVVITHG-TDTMEETAYFLNLTI--KSDKPVVLVGAMRPSTAISADGPKNLYN 140 (334)
T ss_dssp TTCCEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHH
T ss_pred cCCCeEEEECC-CchHHHHHHHHHHHc--CCCCCEEEECCCCCCCCCCchHHHHHHH
Confidence 45789998875 799999999888653 358999998641 12355555544
No 102
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=46.05 E-value=42 Score=26.68 Aligned_cols=42 Identities=19% Similarity=0.222 Sum_probs=25.9
Q ss_pred HHHHHHHHcCCeEEecCCC-----------------CChhHHHHHHHHhcCCeEEEEec
Q 028256 41 QLGKQLVERNIDLVYGGGS-----------------IGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 41 ~lG~~la~~g~~lv~GGg~-----------------~GlM~a~a~gA~~~gG~viGv~P 82 (211)
+.++.|.+.|...+.=++. .|+++++.+.|...+++.|||+-
T Consensus 65 ~~~~~l~~~g~d~iviaCnTa~~~~~~l~~~~~iPvi~i~~~~~~~a~~~~~~rigvla 123 (228)
T 1jfl_A 65 WTAKRLEECGADFIIMPCNTAHAFVEDIRKAIKIPIISMIEETAKKVKELGFKKAGLLA 123 (228)
T ss_dssp HHHHHHHHHTCSEEECSCTGGGGGHHHHHHHCSSCBCCHHHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHcCCCEEEEcCccHHHHHHHHHHhCCCCEechHHHHHHHHHHcCCCeEEEEe
Confidence 5556666666655444433 24567777777665777788864
No 103
>2vch_A Hydroquinone glucosyltransferase; glycosyltransferase, N-glucosyltransferase, UDP-glucose- dependent, plant glycosyltransferase; HET: UDP; 1.45A {Arabidopsis thaliana} SCOP: c.87.1.10 PDB: 2vce_A* 2vg8_A*
Probab=46.01 E-value=60 Score=28.87 Aligned_cols=41 Identities=10% Similarity=0.133 Sum_probs=29.2
Q ss_pred HHHHhcCE-EEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHH
Q 028256 110 EMARQADA-FIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLS 161 (211)
Q Consensus 110 ~m~~~sDa-~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~ 161 (211)
.++.++|+ .++--||.||..|.. . +++|++++-. +.|...+
T Consensus 351 ~vL~h~~v~~fvtHgG~~S~~Eal---~------~GvP~i~~P~--~~DQ~~n 392 (480)
T 2vch_A 351 QVLAHPSTGGFLTHCGWNSTLESV---V------SGIPLIAWPL--YAEQKMN 392 (480)
T ss_dssp HHHHSTTEEEEEECCCHHHHHHHH---H------HTCCEEECCC--STTHHHH
T ss_pred HHhCCCCcCeEEecccchhHHHHH---H------cCCCEEeccc--cccchHH
Confidence 45677775 777899999988775 3 6899998743 4555433
No 104
>3c48_A Predicted glycosyltransferases; retaining glycosyltransferase, beta alpha beta, substrate AS catalysis; 2.10A {Corynebacterium glutamicum} PDB: 3c4v_A* 3c4q_A*
Probab=45.44 E-value=22 Score=30.17 Aligned_cols=39 Identities=13% Similarity=0.234 Sum_probs=24.8
Q ss_pred hcCcceEEEEeCCCCCC-------CHHHHHHHHHHHHHHHHcCCeE
Q 028256 15 KSRFKRVCVFCGSSPGK-------SPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~-------~~~~~~~A~~lG~~la~~g~~l 53 (211)
..+||+|++++..-.+. .--....+.+|++.|+++||.+
T Consensus 17 ~~~mmkIl~i~~~~~p~~~~~~~~~GG~~~~~~~la~~L~~~G~~V 62 (438)
T 3c48_A 17 RGSHMRVAMISMHTSPLQQPGTGDSGGMNVYILSTATELAKQGIEV 62 (438)
T ss_dssp --CCCEEEEECTTSCTTCC-------CHHHHHHHHHHHHHHTTCEE
T ss_pred CcchheeeeEEeeccccccCCCCCCCCHHHHHHHHHHHHHhcCCEE
Confidence 34488999997543221 0112355789999999999876
No 105
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=45.38 E-value=53 Score=25.81 Aligned_cols=57 Identities=12% Similarity=0.061 Sum_probs=40.8
Q ss_pred cceEEEEeCCCCCCCHHH----------------HHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 18 FKRVCVFCGSSPGKSPSY----------------QLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~----------------~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..+|+|++-.+...+-.. .+.+++.-+.|.+.|+.+|-||+. +++-|.+.|-..+=+
T Consensus 94 ~~kIavvg~~~~~~~~~~~~~ll~~~i~~~~~~~~~e~~~~i~~l~~~G~~vvVG~~~------~~~~A~~~Gl~~vli 166 (196)
T 2q5c_A 94 GNELALIAYKHSIVDKHEIEAMLGVKIKEFLFSSEDEITTLISKVKTENIKIVVSGKT------VTDEAIKQGLYGETI 166 (196)
T ss_dssp CSEEEEEEESSCSSCHHHHHHHHTCEEEEEEECSGGGHHHHHHHHHHTTCCEEEECHH------HHHHHHHTTCEEEEC
T ss_pred CCcEEEEeCcchhhHHHHHHHHhCCceEEEEeCCHHHHHHHHHHHHHCCCeEEECCHH------HHHHHHHcCCcEEEE
Confidence 358999987666544221 135677788888999999999854 688888998775554
No 106
>3hly_A Flavodoxin-like domain; Q5MZP6_SYNP6, flavoprotein, DFA1, SNR135D, NESG, structural genomics, PSI-2; 2.40A {Synechococcus elongatus pcc 6301}
Probab=45.34 E-value=22 Score=26.80 Aligned_cols=30 Identities=23% Similarity=0.208 Sum_probs=19.7
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
+|.|+.+|..++.. +.|+.+++.|.+.|+.
T Consensus 2 kv~IvY~S~tGnT~---~~A~~ia~~l~~~g~~ 31 (161)
T 3hly_A 2 SVLIGYLSDYGYSD---RLSQAIGRGLVKTGVA 31 (161)
T ss_dssp CEEEEECTTSTTHH---HHHHHHHHHHHHTTCC
T ss_pred EEEEEEECCChHHH---HHHHHHHHHHHhCCCe
Confidence 45666677776533 5677788877777654
No 107
>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}
Probab=45.21 E-value=22 Score=29.94 Aligned_cols=37 Identities=3% Similarity=-0.121 Sum_probs=26.0
Q ss_pred HHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhc
Q 028256 161 SFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 161 ~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
..+-.++++|-++.......+-.++.+++++.+.+-.
T Consensus 285 ~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~ 321 (340)
T 3gms_A 285 RHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAE 321 (340)
T ss_dssp HHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTT
T ss_pred HHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcC
Confidence 3344567888887654445667888999999887654
No 108
>3zqu_A Probable aromatic acid decarboxylase; lyase; HET: FNR; 1.50A {Pseudomonas aeruginosa} SCOP: c.34.1.0
Probab=45.03 E-value=39 Score=27.26 Aligned_cols=77 Identities=18% Similarity=0.140 Sum_probs=48.7
Q ss_pred cCEEEEecCCcCcHHHHHHHHH-------H-HHhCCCCCcEEEEeCCccchhHHH--HHHHHHHcCC--CCcccccceEE
Q 028256 115 ADAFIALPGGYGTLEELLEVIT-------W-AQLGIHDKPVGLLNVDGYYNSLLS--FIDKAVDEGF--IAPAARYIIVS 182 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~-------~-~~lg~~~kPiill~~~g~~~~l~~--~l~~~~~~g~--i~~~~~~~i~~ 182 (211)
+|++||.|-..+||.-+..=++ + ..+ ..++|+++.-. ..|..-.. -+..+.+.|. +++ ....+.-
T Consensus 95 aD~mvIaPaSanTlakiA~GiaDnLltraadv~L-k~~~plvl~Pa-em~~~~~~~~Nm~~L~~~G~~iipp-~~g~ya~ 171 (209)
T 3zqu_A 95 PNAMVICPCSTGTLSAVATGACNNLIERAADVAL-KERRPLVLVPR-EAPFSSIHLENMLKLSNLGAVILPA-APGFYHQ 171 (209)
T ss_dssp CCEEEEEEECHHHHHHHHHTCCCSHHHHHHHHHH-HHTCCEEEEEC-CSSCCHHHHHHHHHHHHHTCEECCS-CCCCTTC
T ss_pred cCEEEEeeCCHhHHHHHHccccCcHHHHHHHHHH-hcCCcEEEEEc-ccccCHHHHHHHHHHHHCCCEEeCC-CcccccC
Confidence 8999999999999987653111 0 111 14789999855 46654322 2445555565 333 3345556
Q ss_pred cCCHHHHHHHhh
Q 028256 183 AQTAHELICKLE 194 (211)
Q Consensus 183 ~~d~ee~~~~l~ 194 (211)
-.+.||+++++.
T Consensus 172 p~~iediv~~vv 183 (209)
T 3zqu_A 172 PQSVEDLVDFVV 183 (209)
T ss_dssp CCSHHHHHHHHH
T ss_pred CCCHHHHHHHHH
Confidence 788999988765
No 109
>1oi7_A Succinyl-COA synthetase alpha chain; SCS, ligase, riken structural genomics/proteomics initiative, RSGI, structural genomics; 1.23A {Thermus thermophilus} SCOP: c.2.1.8 c.23.4.1
Probab=44.75 E-value=92 Score=25.99 Aligned_cols=88 Identities=16% Similarity=-0.003 Sum_probs=45.7
Q ss_pred CHHHHHHHHHH--hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCC-----c-
Q 028256 103 GMHQRKAEMAR--QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA-----P- 174 (211)
Q Consensus 103 ~~~~Rk~~m~~--~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~-----~- 174 (211)
++.+=.+.|.+ ..+++++..-+.|+.+|....+.-. ..+|||+++..+ -..+--.- +-..|-+- .
T Consensus 186 ~~~d~l~~~~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G-~~~~~~~~---~~Htgal~~~~~g~~ 258 (288)
T 1oi7_A 186 TFKDLLPLFNEDPETEAVVLIGEIGGSDEEEAAAWVKD---HMKKPVVGFIGG-RSAPKGKR---MGHAGAIIMGNVGTP 258 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEECSSSSHHHHHHHHHHH---HCCSCEEEEESC-C---------------------CCSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEec-CCCCcccc---CcchhhcccCCCCCH
Confidence 45444444544 3457777777788887755443322 257999998653 33311000 11112221 0
Q ss_pred c------cccceEEcCCHHHHHHHhhhhc
Q 028256 175 A------ARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 175 ~------~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
+ ...-+..++|++|+++.+++.+
T Consensus 259 ~~~~aa~~~aGv~~~~~~~el~~~~~~~~ 287 (288)
T 1oi7_A 259 ESKLRAFAEAGIPVADTIDEIVELVKKAL 287 (288)
T ss_dssp HHHHHHHHHHTCCBCSSHHHHHHHHHHHH
T ss_pred HHHHHHHHHCCCeEeCCHHHHHHHHHHHh
Confidence 0 1112567999999999987653
No 110
>3lwd_A 6-phosphogluconolactonase; structural genomics, JOI for structural genomics, JCSG, protein structure initiative hydrolase; 1.75A {Chromohalobacter salexigens}
Probab=44.65 E-value=28 Score=28.26 Aligned_cols=78 Identities=14% Similarity=0.173 Sum_probs=46.2
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc------hhHHHHHHHHHHcCCCCccc-ccceEE--
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY------NSLLSFIDKAVDEGFIAPAA-RYIIVS-- 182 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~------~~l~~~l~~~~~~g~i~~~~-~~~i~~-- 182 (211)
.+...+.|+|+|| .|...+++.+.- -...=+-|.+++.+.|| +....+++ +.++++.. ...++.
T Consensus 30 ~~~~~~~l~LsgG-stp~~~y~~L~~--~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~----~~ll~~~~~~~~~~~~~ 102 (226)
T 3lwd_A 30 AKRERALLVVSGG-STPKPFFTSLAA--KALPWARVDVTLADERWVTADDADSNARLVR----ETLLVGPAAEACFHPLT 102 (226)
T ss_dssp TTSSCEEEEECCS-STTHHHHHHHHT--SCSCGGGEEEEESEEESSCTTSTTCHHHHHH----HHTSSGGGGGSEEECSC
T ss_pred HhCCCEEEEEcCC-CCHHHHHHHHHh--cCCCchhEEEEEeeecccCCCChHHHHHHHH----HHhcCCCCcHHhEecCC
Confidence 3457899999999 488888887762 22222577888888887 33444443 22343311 122332
Q ss_pred --cCCHHHHHHHhhhh
Q 028256 183 --AQTAHELICKLEVF 196 (211)
Q Consensus 183 --~~d~ee~~~~l~~~ 196 (211)
..|+++..+..++.
T Consensus 103 ~~~~~~~~~~~~ye~~ 118 (226)
T 3lwd_A 103 TDDDTPEAGVETVAER 118 (226)
T ss_dssp CSSSSHHHHHHHHHHH
T ss_pred CCcCCHHHHHHHHHHH
Confidence 25777776666544
No 111
>3nwp_A 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, hydrolase; HET: MSE P6G PG4; 1.40A {Shewanella baltica}
Probab=44.57 E-value=50 Score=26.82 Aligned_cols=80 Identities=16% Similarity=0.104 Sum_probs=46.9
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc------hhHHHHHHHHHHcCCCCcccc-cceEE-
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY------NSLLSFIDKAVDEGFIAPAAR-YIIVS- 182 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~------~~l~~~l~~~~~~g~i~~~~~-~~i~~- 182 (211)
+.+...+.|+|+||. |...+++.+.- .+..=+-|.+++.+.|| +....+++ +.++++-.. ..++.
T Consensus 33 i~~~~~~~l~lsgGs-tp~~~y~~L~~--~~idw~~v~~f~~DEr~vp~~~~~Sn~~~~~----~~ll~~~~~~~~~~~~ 105 (233)
T 3nwp_A 33 VDARGKASLVVSGGS-TPLKLFQLLSM--KSIDWSDVYITLADERWVEADADASNERLVR----EHLLQNRASNAKFRGL 105 (233)
T ss_dssp HHHHSCEEEEECCSS-TTHHHHHHHHH--CCSCGGGEEEEESEEESSCTTSTTCHHHHHH----HHTSSGGGGGSEECCS
T ss_pred HHhCCCEEEEEcCCC-CHHHHHHHHHh--cCCChhHeEEEeCeecccCCCChHHHHHHHH----HHhhccCCccceEEcC
Confidence 456688999999994 77788887763 22223567888888777 23444443 223333211 12222
Q ss_pred ---cCCHHHHHHHhhhhc
Q 028256 183 ---AQTAHELICKLEVFF 197 (211)
Q Consensus 183 ---~~d~ee~~~~l~~~~ 197 (211)
..|+++..+..++..
T Consensus 106 ~~~~~~~~~~~~~ye~~i 123 (233)
T 3nwp_A 106 KNMFSTAEAGADMAAESL 123 (233)
T ss_dssp CCSSSSHHHHHHHHHHHT
T ss_pred CCCCCCHHHHHHHHHHHH
Confidence 256777776665443
No 112
>2xci_A KDO-transferase, 3-deoxy-D-manno-2-octulosonic acid transferase; KDTA, GSEA, glycosyltransferase superfamily B,; HET: PG4; 2.00A {Aquifex aeolicus} PDB: 2xcu_A*
Probab=44.46 E-value=41 Score=28.69 Aligned_cols=69 Identities=23% Similarity=0.108 Sum_probs=41.8
Q ss_pred HHHHHhcCEEEEec----CCcCcHHHHHHHHHHHHhCCCCCcEEEE-eCCccchhHHHHHHHHHHcCCCCcccccceEEc
Q 028256 109 AEMARQADAFIALP----GGYGTLEELLEVITWAQLGIHDKPVGLL-NVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 183 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp----GG~GTL~El~~~~~~~~lg~~~kPiill-~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 183 (211)
..+...||++++.+ +|.-+ +.|+++ .++|||.- +..| +.++.. .+.+.|+ +...
T Consensus 272 ~~~y~~aDv~vl~ss~~e~gg~~---~lEAmA------~G~PVI~~~~~~~-~~e~~~---~~~~~G~--------l~~~ 330 (374)
T 2xci_A 272 KELYPVGKIAIVGGTFVNIGGHN---LLEPTC------WGIPVIYGPYTHK-VNDLKE---FLEKEGA--------GFEV 330 (374)
T ss_dssp HHHGGGEEEEEECSSSSSSCCCC---CHHHHT------TTCCEEECSCCTT-SHHHHH---HHHHTTC--------EEEC
T ss_pred HHHHHhCCEEEECCcccCCCCcC---HHHHHH------hCCCEEECCCccC-hHHHHH---HHHHCCC--------EEEe
Confidence 45778899877643 22233 556666 78999862 2222 233332 3333443 5567
Q ss_pred CCHHHHHHHhhhhcc
Q 028256 184 QTAHELICKLEVFFF 198 (211)
Q Consensus 184 ~d~ee~~~~l~~~~~ 198 (211)
+|++++.+.|.+...
T Consensus 331 ~d~~~La~ai~~ll~ 345 (374)
T 2xci_A 331 KNETELVTKLTELLS 345 (374)
T ss_dssp CSHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHh
Confidence 899999988887653
No 113
>2d6f_A Glutamyl-tRNA(Gln) amidotransferase subunit D; ligase, ligase/RNA complex; 3.15A {Methanothermobacterthermautotrophicus} SCOP: b.38.3.1 c.88.1.1
Probab=44.43 E-value=39 Score=30.47 Aligned_cols=49 Identities=14% Similarity=0.132 Sum_probs=35.8
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..+++++- ..+|||||.+.- --.|...+++..
T Consensus 167 ~~DG~VItHG-TDTMeeTA~~Lsl~l--~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 220 (435)
T 2d6f_A 167 GADGVVVAHG-TDTMHYTSAALSFML--RTPVPVVFTGAQRSSDRPSSDASLNIQCS 220 (435)
T ss_dssp TCSEEEEECC-TTTHHHHHHHHHHHE--ECSSCEEEECCSSCTTSTTCTHHHHHHHH
T ss_pred CCCeEEEEcC-cchHHHHHHHHHHHh--CCCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 5799999975 799999999988764 358999998652 134556665543
No 114
>1o7j_A L-asparaginase; atomic resolution, hydrolase; 1.0A {Erwinia chrysanthemi} SCOP: c.88.1.1 PDB: 1hfj_A 1hfk_A* 1hg0_A 1hg1_A 1hfw_A* 1jsr_A* 1jsl_A 2gvn_A 1zcf_A 2hln_A* 2jk0_A
Probab=43.98 E-value=44 Score=28.72 Aligned_cols=49 Identities=18% Similarity=0.239 Sum_probs=34.7
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..+++++- . .+|||||.+.- --.|...+++..
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (327)
T 1o7j_A 85 DVDGVVITHG-TDTVEESAYFLHLTV-K-SDKPVVFVAAMRPATAISADGPMNLLEA 138 (327)
T ss_dssp TCCEEEEECC-STTHHHHHHHHHHHC-C-CCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 4689999975 799999999888653 3 68999998552 123455555543
No 115
>1iow_A DD-ligase, DDLB, D-ALA\:D-Ala ligase; glycogen phosphorylase, cell WALL, peptidoglycan synthesis, vancomycin, ADP binding; HET: ADP PHY; 1.90A {Escherichia coli} SCOP: c.30.1.2 d.142.1.1 PDB: 1iov_A* 2dln_A* 3v4z_A*
Probab=43.90 E-value=37 Score=27.49 Aligned_cols=39 Identities=15% Similarity=0.129 Sum_probs=27.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|+|.+|......+.-...++.+.+.+.+.|+.++.=.
T Consensus 3 ~~i~il~gg~s~e~~~s~~~~~~l~~al~~~G~~v~~~~ 41 (306)
T 1iow_A 3 DKIAVLLGGTSAEREVSLNSGAAVLAGLREGGIDAYPVD 41 (306)
T ss_dssp CEEEEECCCSSTTHHHHHHHHHHHHHHHHHTTCEEEEEC
T ss_pred cEEEEEeCCCCccceEcHHhHHHHHHHHHHCCCeEEEEe
Confidence 579999875543223323467889999999999876543
No 116
>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*
Probab=43.81 E-value=1.3e+02 Score=25.28 Aligned_cols=142 Identities=10% Similarity=0.051 Sum_probs=65.7
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeec----CCHHHHHHHHH-HhcCEEEEecC
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAV----SGMHQRKAEMA-RQADAFIALPG 123 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~----~~~~~Rk~~m~-~~sDa~IvlpG 123 (211)
..+|+|+|+.|++ +..-|+..|. +|+++-.+.. ..+.. .-..+.++.. .++.++-..+. ...|++|-.-|
T Consensus 198 ~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G 274 (376)
T 1e3i_A 198 TCAVFGLGCVGLS--AIIGCKIAGASRIIAIDINGE-KFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAG 274 (376)
T ss_dssp EEEEECCSHHHHH--HHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSC
T ss_pred EEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHhCCcEEEccccccchHHHHHHHHhCCCccEEEECCC
Confidence 3568887554443 4555677787 7888743221 11111 0112223221 23443322222 24688887777
Q ss_pred CcCcHHHHHHHHHHH-----HhCCCCCcEE-----------EEeCC-ccc--hhHHHHHHHHHHcCCCCccc-ccceEEc
Q 028256 124 GYGTLEELLEVITWA-----QLGIHDKPVG-----------LLNVD-GYY--NSLLSFIDKAVDEGFIAPAA-RYIIVSA 183 (211)
Q Consensus 124 G~GTL~El~~~~~~~-----~lg~~~kPii-----------ll~~~-g~~--~~l~~~l~~~~~~g~i~~~~-~~~i~~~ 183 (211)
+.-++++.+..+.-. .+|....++- +.... +.| ...+..+-.++.+|-++.+. ....+-.
T Consensus 275 ~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l 354 (376)
T 1e3i_A 275 TAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPF 354 (376)
T ss_dssp CHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEG
T ss_pred CHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEEEecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecH
Confidence 756666655443211 0011111111 11110 101 12223333456777776432 2334567
Q ss_pred CCHHHHHHHhhh
Q 028256 184 QTAHELICKLEV 195 (211)
Q Consensus 184 ~d~ee~~~~l~~ 195 (211)
++.+|+++.+++
T Consensus 355 ~~~~~A~~~~~~ 366 (376)
T 1e3i_A 355 ESINDAIDLMKE 366 (376)
T ss_dssp GGHHHHHHHHHT
T ss_pred HHHHHHHHHHhc
Confidence 788888887765
No 117
>4pga_A Glutaminase-asparaginase; bacterial amidohydrolase; 1.70A {Pseudomonas SP} SCOP: c.88.1.1 PDB: 1djp_A* 1djo_A* 3pga_1
Probab=43.70 E-value=32 Score=29.84 Aligned_cols=49 Identities=22% Similarity=0.305 Sum_probs=34.9
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-...++++- ..+|||||.+.- --.|...+++..
T Consensus 90 ~~dGvVItHG-TDTm~~TA~~L~~~l--~~~kPVVlTGa~rp~~~~~sDg~~NL~~A 143 (337)
T 4pga_A 90 DVDGIVITHG-TDTLEETAYFLNLVQ--KTDKPIVVVGSMRPGTAMSADGMLNLYNA 143 (337)
T ss_dssp TCSEEEEECC-STTHHHHHHHHHHHC--CCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEECC-CccHHHHHHHHHHHc--CCCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 4788988875 799999999888753 358999998541 134555565543
No 118
>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}
Probab=43.61 E-value=1e+02 Score=25.02 Aligned_cols=19 Identities=5% Similarity=0.003 Sum_probs=13.8
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 21 G~aia~~la~~G~~V~~~~ 39 (280)
T 3tox_A 21 GRAAALLFAREGAKVVVTA 39 (280)
T ss_dssp HHHHHHHHHHTTCEEEECC
T ss_pred HHHHHHHHHHCCCEEEEEE
Confidence 4567778888888876554
No 119
>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9
Probab=42.56 E-value=25 Score=25.76 Aligned_cols=74 Identities=15% Similarity=0.085 Sum_probs=35.9
Q ss_pred cCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCC---C-CCCCCCCCceeeecC--CHHHHHHHHHHhcCEEEEec
Q 028256 49 RNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLM---P-REITGDTVGEVKAVS--GMHQRKAEMARQADAFIALP 122 (211)
Q Consensus 49 ~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~---~-~e~~~~~~~~~~~~~--~~~~Rk~~m~~~sDa~Ivlp 122 (211)
+++.+|+|+|..| ..+++...+.|-.++.|-++... . .+..... ...+..+ +...-+..-++.+|++|+..
T Consensus 3 ~~~vlI~G~G~vG--~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~-~~~i~gd~~~~~~l~~a~i~~ad~vi~~~ 79 (153)
T 1id1_A 3 KDHFIVCGHSILA--INTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDN-ADVIPGDSNDSSVLKKAGIDRCRAILALS 79 (153)
T ss_dssp CSCEEEECCSHHH--HHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTT-CEEEESCTTSHHHHHHHTTTTCSEEEECS
T ss_pred CCcEEEECCCHHH--HHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCC-CeEEEcCCCCHHHHHHcChhhCCEEEEec
Confidence 3566777765533 44555555666677777543100 0 0000111 1223222 22222223357899999987
Q ss_pred CCc
Q 028256 123 GGY 125 (211)
Q Consensus 123 GG~ 125 (211)
+.-
T Consensus 80 ~~d 82 (153)
T 1id1_A 80 DND 82 (153)
T ss_dssp SCH
T ss_pred CCh
Confidence 763
No 120
>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*
Probab=42.48 E-value=29 Score=29.00 Aligned_cols=43 Identities=14% Similarity=0.114 Sum_probs=25.7
Q ss_pred HHHHcCCCCcccccceEEcCCHHHHHHHhhhhccCceeEEeeeec
Q 028256 165 KAVDEGFIAPAARYIIVSAQTAHELICKLEVFFFFFFWLFSFSVL 209 (211)
Q Consensus 165 ~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~~~~~ 209 (211)
.++++|-+++-. ..+-.++.+|+++.+++-....+-.-+||-+
T Consensus 299 ~l~~~g~i~p~~--~~~~l~~~~~A~~~l~~g~~~GKvVl~~skL 341 (348)
T 4eez_A 299 QFGAEGKVKPIV--ATRKLEEINDIIDEMKAGKIEGRMVIDFTKL 341 (348)
T ss_dssp HHHHTTSCCCCE--EEECGGGHHHHHHHHHTTCCSSEEEEECC--
T ss_pred HHHHcCCCEEEE--EEEeHHHHHHHHHHHHCCCCccEEEEEcccc
Confidence 466778776532 2334677888888877654444666666643
No 121
>3s99_A Basic membrane lipoprotein; ssgcid, structural genomics, SEA structural genomics center for infectious disease, adenine; HET: ADE; 2.05A {Brucella melitensis biovar abortus}
Probab=42.47 E-value=40 Score=29.09 Aligned_cols=41 Identities=17% Similarity=0.234 Sum_probs=32.5
Q ss_pred HHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 37 LAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 37 ~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..++++++.|-++|..+|+... |.| .+.++|.+.|..+||+
T Consensus 195 ~kg~~~a~~l~~~G~DvIf~~~--d~~-Gv~~aa~e~Gv~vIG~ 235 (356)
T 3s99_A 195 GKEADAAKALIDQGVDIITQHT--DST-AAIQVAHDRGIKAFGQ 235 (356)
T ss_dssp HHHHHHHHHHHHTTCSEEEESS--SSS-HHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHhCCCcEEEECC--Cch-HHHHHHHHcCCEEEEE
Confidence 4567788888889999998764 445 4667888999999999
No 122
>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0
Probab=42.33 E-value=44 Score=26.41 Aligned_cols=34 Identities=18% Similarity=0.216 Sum_probs=22.4
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
.+.++|-|.|+++ + ..+++++.|+++|+.++...
T Consensus 11 ~~~k~vlITGas~-g-------iG~~ia~~l~~~G~~v~~~~ 44 (256)
T 3ezl_A 11 MSQRIAYVTGGMG-G-------IGTSICQRLHKDGFRVVAGC 44 (256)
T ss_dssp --CEEEEETTTTS-H-------HHHHHHHHHHHTTEEEEEEE
T ss_pred CCCCEEEEECCCC-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 3455666665544 2 35678888999999987654
No 123
>2wlt_A L-asparaginase; hydrolase; 1.40A {Helicobacter pylori} PDB: 2wt4_A
Probab=41.96 E-value=51 Score=28.41 Aligned_cols=49 Identities=20% Similarity=0.205 Sum_probs=34.5
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..++++.- . .+|||||.+.- --.|...+++..
T Consensus 85 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 138 (332)
T 2wlt_A 85 RIQGVVITHG-TDTLEESAYFLNLVL-H-STKPVVLVGAMRNASSLSADGALNLYEA 138 (332)
T ss_dssp TCCEEEEECC-SSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEecC-chhHHHHHHHHHHHh-C-CCCCEEEECCCCCCCCCCcchHHHHHHH
Confidence 4689999875 799999999888553 3 68999998552 123455555543
No 124
>4ici_A Putative flavoprotein; PF12682 family protein, flavodoxin_4, structural genomics, J center for structural genomics, JCSG; HET: MSE FMN EPE; 1.40A {Bacteroides eggerthii}
Probab=41.71 E-value=15 Score=28.24 Aligned_cols=80 Identities=11% Similarity=0.072 Sum_probs=41.4
Q ss_pred HHhcCEE-EEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc--hhHHHHHHHHHHcCCCCcccccceEEc-CCHH
Q 028256 112 ARQADAF-IALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY--NSLLSFIDKAVDEGFIAPAARYIIVSA-QTAH 187 (211)
Q Consensus 112 ~~~sDa~-IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~--~~l~~~l~~~~~~g~i~~~~~~~i~~~-~d~e 187 (211)
+...|.+ +..|=-.|++...+..+ +.++...+|+++++...|.+ ..-...++.+....-+ .+-+.+. .+.+
T Consensus 85 l~~yD~iilg~Pvy~g~~~~~~~~f-l~~~~l~gk~v~~f~t~g~~~~g~a~~~l~~~l~~~~~----~~g~~~~~~~~~ 159 (171)
T 4ici_A 85 IGTYDVVFIGYPIWWDLAPRIINTF-IEGHSLKGKTVVPFATSGGSSIGNSATVLKKTYPDLNW----KEGRLLNRTDEK 159 (171)
T ss_dssp GGGCSEEEEEEECBTTBCCHHHHHH-HHHSCCTTSEEEEEEECSSCCSHHHHHHHHHHSTTSEE----CCCEECSSCCHH
T ss_pred HhHCCEEEEecccccCCchHHHHHH-HHHcCCCcCEEEEEEecCCCCcchHHHHHHHHcCCCee----ccCeEecCCCHH
Confidence 3567764 44454445554443333 23344568999998775433 4445555555432111 1222222 3566
Q ss_pred HHHHHhhhh
Q 028256 188 ELICKLEVF 196 (211)
Q Consensus 188 e~~~~l~~~ 196 (211)
++.++|++.
T Consensus 160 ~i~~Wl~~~ 168 (171)
T 4ici_A 160 AIRAWLDVI 168 (171)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHh
Confidence 777787653
No 125
>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*
Probab=41.65 E-value=1e+02 Score=22.74 Aligned_cols=16 Identities=31% Similarity=0.310 Sum_probs=10.7
Q ss_pred HHHhcCEEEEecCCcC
Q 028256 111 MARQADAFIALPGGYG 126 (211)
Q Consensus 111 m~~~sDa~IvlpGG~G 126 (211)
.++..|++|-+.|...
T Consensus 64 ~~~~~d~vi~~a~~~~ 79 (206)
T 1hdo_A 64 TVAGQDAVIVLLGTRN 79 (206)
T ss_dssp HHTTCSEEEECCCCTT
T ss_pred HHcCCCEEEECccCCC
Confidence 3456788888776544
No 126
>3end_A Light-independent protochlorophyllide reductase iron-sulfur ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2} PDB: 3fwy_A*
Probab=41.24 E-value=37 Score=27.89 Aligned_cols=40 Identities=18% Similarity=0.159 Sum_probs=25.3
Q ss_pred HhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 11 AAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 11 ~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
.....++++.|+|. + .-+.... ..|..|+..||++|..++
T Consensus 34 ~~~~~~~~~vI~v~-~-KGGvGKT--T~a~nLA~~La~~G~~Vl 73 (307)
T 3end_A 34 EADKITGAKVFAVY-G-KGGIGKS--TTSSNLSAAFSILGKRVL 73 (307)
T ss_dssp ------CCEEEEEE-C-STTSSHH--HHHHHHHHHHHHTTCCEE
T ss_pred cccccCCceEEEEE-C-CCCccHH--HHHHHHHHHHHHCCCeEE
Confidence 33445567889998 5 4444443 568899999999998764
No 127
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=41.08 E-value=1.7e+02 Score=25.00 Aligned_cols=42 Identities=19% Similarity=0.214 Sum_probs=26.0
Q ss_pred hhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-CCeE--EecCCC
Q 028256 13 ALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVER-NIDL--VYGGGS 59 (211)
Q Consensus 13 ~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~-g~~l--v~GGg~ 59 (211)
....+|++|+++.|+++ ++.+. ..|-+.|.++ ++.+ +.+|..
T Consensus 20 ~~~~~m~ki~~v~Gtr~----~~~~~-a~li~~l~~~~~~~~~~~~tG~h 64 (396)
T 3dzc_A 20 FQSNAMKKVLIVFGTRP----EAIKM-APLVQQLCQDNRFVAKVCVTGQH 64 (396)
T ss_dssp ----CCEEEEEEECSHH----HHHHH-HHHHHHHHHCTTEEEEEEECCSS
T ss_pred HHhCCCCeEEEEEeccH----hHHHH-HHHHHHHHhCCCCcEEEEEeccc
Confidence 33456789999988774 56655 4688888876 5543 555533
No 128
>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1
Probab=41.06 E-value=85 Score=26.54 Aligned_cols=81 Identities=19% Similarity=0.182 Sum_probs=38.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeec----CCHHHHHHHHH-HhcCEEEEecC
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAV----SGMHQRKAEMA-RQADAFIALPG 123 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~----~~~~~Rk~~m~-~~sDa~IvlpG 123 (211)
..||+|+|..|+ ++..-|+..|. +|+++-.+.. ..+.. .-..+.++.. .++.+.-..+. ...|++|-.-|
T Consensus 195 ~VlV~GaG~vG~--~a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 271 (374)
T 1cdo_A 195 TCAVFGLGAVGL--AAVMGCHSAGAKRIIAVDLNPD-KFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVG 271 (374)
T ss_dssp EEEEECCSHHHH--HHHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCCEEECGGGCSSCHHHHHHHHHTSCBSEEEECSC
T ss_pred EEEEECCCHHHH--HHHHHHHHcCCCEEEEEcCCHH-HHHHHHHhCCceEEeccccchhHHHHHHHHhCCCCCEEEECCC
Confidence 456888654444 34556777787 7888743221 11110 0111222221 23433222221 13677777777
Q ss_pred CcCcHHHHHHH
Q 028256 124 GYGTLEELLEV 134 (211)
Q Consensus 124 G~GTL~El~~~ 134 (211)
+.-++++.+..
T Consensus 272 ~~~~~~~~~~~ 282 (374)
T 1cdo_A 272 NVGVMRNALES 282 (374)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 65555555443
No 129
>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*
Probab=40.91 E-value=1e+02 Score=26.03 Aligned_cols=81 Identities=14% Similarity=0.071 Sum_probs=40.4
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC--CCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcH
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT--GDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTL 128 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~--~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL 128 (211)
..+|+|+|..|+ ++..-|+..|.+|+++..+.. ..+.. .-..+.++...+-. .-..+....|++|-.-|+.-++
T Consensus 190 ~VlV~GaG~vG~--~~~q~a~~~Ga~Vi~~~~~~~-~~~~~~~~lGa~~v~~~~~~~-~~~~~~~~~D~vid~~g~~~~~ 265 (366)
T 1yqd_A 190 HIGIVGLGGLGH--VAVKFAKAFGSKVTVISTSPS-KKEEALKNFGADSFLVSRDQE-QMQAAAGTLDGIIDTVSAVHPL 265 (366)
T ss_dssp EEEEECCSHHHH--HHHHHHHHTTCEEEEEESCGG-GHHHHHHTSCCSEEEETTCHH-HHHHTTTCEEEEEECCSSCCCS
T ss_pred EEEEECCCHHHH--HHHHHHHHCCCEEEEEeCCHH-HHHHHHHhcCCceEEeccCHH-HHHHhhCCCCEEEECCCcHHHH
Confidence 356888654343 455667778888888854321 11110 11122333333321 1111123467777777776666
Q ss_pred HHHHHHH
Q 028256 129 EELLEVI 135 (211)
Q Consensus 129 ~El~~~~ 135 (211)
++.+..+
T Consensus 266 ~~~~~~l 272 (366)
T 1yqd_A 266 LPLFGLL 272 (366)
T ss_dssp HHHHHHE
T ss_pred HHHHHHH
Confidence 6665443
No 130
>3oy2_A Glycosyltransferase B736L; rossmann fold, GDP-mannose, sugar, VIRU proteins, viral protein,transferase; 2.31A {Paramecium bursaria chlorella virus NY} PDB: 3oy7_A*
Probab=40.85 E-value=83 Score=26.29 Aligned_cols=76 Identities=21% Similarity=0.264 Sum_probs=44.3
Q ss_pred HHHHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCC---Ccc-----
Q 028256 106 QRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFI---APA----- 175 (211)
Q Consensus 106 ~Rk~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i---~~~----- 175 (211)
+....++..||++|.-. -|+|. =+.|+++ .++||+..+..|. .+ ++.++.- +..
T Consensus 265 ~~~~~~~~~adv~v~pS~~E~~~~--~~lEAma------~G~PvI~s~~~g~----~e----~v~~~~~~~i~~~~~~~~ 328 (413)
T 3oy2_A 265 ERVDMMYNACDVIVNCSSGEGFGL--CSAEGAV------LGKPLIISAVGGA----DD----YFSGDCVYKIKPSAWISV 328 (413)
T ss_dssp HHHHHHHHHCSEEEECCSCCSSCH--HHHHHHT------TTCCEEEECCHHH----HH----HSCTTTSEEECCCEEEEC
T ss_pred HHHHHHHHhCCEEEeCCCcCCCCc--HHHHHHH------cCCCEEEcCCCCh----HH----HHccCccccccccccccc
Confidence 34555778999877642 23342 3666776 7999999876432 22 2222110 000
Q ss_pred --cccc--eEEcCCHHHHHHHhhhhcc
Q 028256 176 --ARYI--IVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 176 --~~~~--i~~~~d~ee~~~~l~~~~~ 198 (211)
.... ++-..|++++.+.| +...
T Consensus 329 ~~~~G~~gl~~~~d~~~la~~i-~l~~ 354 (413)
T 3oy2_A 329 DDRDGIGGIEGIIDVDDLVEAF-TFFK 354 (413)
T ss_dssp TTTCSSCCEEEECCHHHHHHHH-HHTT
T ss_pred ccccCcceeeCCCCHHHHHHHH-HHhc
Confidence 0134 66678999999998 7653
No 131
>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}
Probab=40.77 E-value=70 Score=27.18 Aligned_cols=83 Identities=17% Similarity=0.243 Sum_probs=41.7
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeec----CCHHHHHHHHH-HhcCEEEEec
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAV----SGMHQRKAEMA-RQADAFIALP 122 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~----~~~~~Rk~~m~-~~sDa~Ivlp 122 (211)
...+|+|+|+.|++ +..-|+..|. +|+++-++.. ..+.. .-..+..+.. .++.++-..+. ...|++|-.-
T Consensus 195 ~~VlV~GaG~vG~~--a~q~a~~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~~~gg~D~vid~~ 271 (378)
T 3uko_A 195 SNVAIFGLGTVGLA--VAEGAKTAGASRIIGIDIDSK-KYETAKKFGVNEFVNPKDHDKPIQEVIVDLTDGGVDYSFECI 271 (378)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHHTCSCEEEECSCTT-HHHHHHTTTCCEEECGGGCSSCHHHHHHHHTTSCBSEEEECS
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCeEEEEcCCHH-HHHHHHHcCCcEEEccccCchhHHHHHHHhcCCCCCEEEECC
Confidence 45678888665554 4455666776 7888843221 11111 1112233322 23433222221 1367777777
Q ss_pred CCcCcHHHHHHHH
Q 028256 123 GGYGTLEELLEVI 135 (211)
Q Consensus 123 GG~GTL~El~~~~ 135 (211)
|+..++++.+..+
T Consensus 272 g~~~~~~~~~~~l 284 (378)
T 3uko_A 272 GNVSVMRAALECC 284 (378)
T ss_dssp CCHHHHHHHHHTB
T ss_pred CCHHHHHHHHHHh
Confidence 7766666665443
No 132
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=40.72 E-value=34 Score=29.72 Aligned_cols=65 Identities=14% Similarity=0.092 Sum_probs=37.6
Q ss_pred HHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEE-eCCccchhHHHHHHHHHHcCCCCcccccceEEc-
Q 028256 106 QRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL-NVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA- 183 (211)
Q Consensus 106 ~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill-~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~- 183 (211)
..-..++..||++|.= +|++. .|++. .++|++++ +..+ +..+ ++.|. ...+
T Consensus 293 ~~~~~l~~~ad~vv~~---SGg~~--~EA~a------~g~PvV~~~~~~~-~~e~-------v~~g~--------~~lv~ 345 (403)
T 3ot5_A 293 IDFHNFLRKSYLVFTD---SGGVQ--EEAPG------MGVPVLVLRDTTE-RPEG-------IEAGT--------LKLIG 345 (403)
T ss_dssp HHHHHHHHHEEEEEEC---CHHHH--HHGGG------TTCCEEECCSSCS-CHHH-------HHHTS--------EEECC
T ss_pred HHHHHHHHhcCEEEEC---CccHH--HHHHH------hCCCEEEecCCCc-chhh-------eeCCc--------EEEcC
Confidence 3555678889976533 35555 45555 68999998 4433 3332 22222 2233
Q ss_pred CCHHHHHHHhhhhc
Q 028256 184 QTAHELICKLEVFF 197 (211)
Q Consensus 184 ~d~ee~~~~l~~~~ 197 (211)
.|++++.+.+.+..
T Consensus 346 ~d~~~l~~ai~~ll 359 (403)
T 3ot5_A 346 TNKENLIKEALDLL 359 (403)
T ss_dssp SCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 37888777776543
No 133
>1eiw_A Hypothetical protein MTH538; CHEY-like fold, flavodoxin-like fold, (A/B)5 doubly wound fold, parallel beta sheet; NMR {Methanothermobacterthermautotrophicus} SCOP: c.23.3.1
Probab=40.70 E-value=34 Score=24.83 Aligned_cols=67 Identities=25% Similarity=0.221 Sum_probs=41.3
Q ss_pred HHhcCEEEEecCCcCc-----HHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccc--cceEEcC
Q 028256 112 ARQADAFIALPGGYGT-----LEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAAR--YIIVSAQ 184 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GT-----L~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~--~~i~~~~ 184 (211)
++.||++|+|.|-.-+ -.|+-.++ ..+|||+.+...|-- . ++.... ..-.+-=
T Consensus 36 I~~~~~vIvL~G~~t~~s~wv~~EI~~A~------~~gkpIigV~~~g~~-~-------------~P~~l~~~a~~iV~W 95 (111)
T 1eiw_A 36 PEDADAVIVLAGLWGTRRDEILGAVDLAR------KSSKPIITVRPYGLE-N-------------VPPELEAVSSEVVGW 95 (111)
T ss_dssp SSSCSEEEEEGGGTTTSHHHHHHHHHHHT------TTTCCEEEECCSSSS-C-------------CCTTHHHHCSEEECS
T ss_pred cccCCEEEEEeCCCcCCChHHHHHHHHHH------HcCCCEEEEEcCCCC-c-------------CCHHHHhhCceeccC
Confidence 4678999999887653 33444433 379999999876531 1 111111 2234566
Q ss_pred CHHHHHHHhhhhcc
Q 028256 185 TAHELICKLEVFFF 198 (211)
Q Consensus 185 d~ee~~~~l~~~~~ 198 (211)
+.+.+++.|.+...
T Consensus 96 n~~~I~~aI~~~~~ 109 (111)
T 1eiw_A 96 NPHCIRDALEDALD 109 (111)
T ss_dssp CHHHHHHHHHHHHC
T ss_pred CHHHHHHHHHhccC
Confidence 77888888876643
No 134
>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*
Probab=40.58 E-value=60 Score=27.15 Aligned_cols=142 Identities=14% Similarity=0.091 Sum_probs=65.9
Q ss_pred CCeEEecCCCCChhHHHHHHHHhc-CCeEEEEecCcCCCCCCC-CCCCceeee-cCCHHHHHHHHHH--hcCEEEEecCC
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDG-GRHVLGVIPKTLMPREIT-GDTVGEVKA-VSGMHQRKAEMAR--QADAFIALPGG 124 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~-gG~viGv~P~~~~~~e~~-~~~~~~~~~-~~~~~~Rk~~m~~--~sDa~IvlpGG 124 (211)
...+|.|+|..|++ +..-|+.. +.+|+++-.+.. ..+.. .-..+..+. .+++.++-..+.. ..|+++-.-|+
T Consensus 173 ~~vlv~GaG~vG~~--a~qla~~~g~~~Vi~~~~~~~-~~~~~~~lGa~~~i~~~~~~~~~v~~~t~g~g~d~v~d~~G~ 249 (345)
T 3jv7_A 173 STAVVIGVGGLGHV--GIQILRAVSAARVIAVDLDDD-RLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGA 249 (345)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHHCCCEEEEEESCHH-HHHHHHHTTCSEEEECSTTHHHHHHHHHGGGCEEEEEESSCC
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEEcCCHH-HHHHHHHcCCCEEEcCCCcHHHHHHHHhCCCCCeEEEECCCC
Confidence 34567776554444 34455555 568888743321 00110 011222332 2234333332322 46777777777
Q ss_pred cCcHHHHHHHHHH----HHhCCCCC-c-----------EEEEeCCcc-chhHHHHHHHHHHcCCCCcccccceEEcCCHH
Q 028256 125 YGTLEELLEVITW----AQLGIHDK-P-----------VGLLNVDGY-YNSLLSFIDKAVDEGFIAPAARYIIVSAQTAH 187 (211)
Q Consensus 125 ~GTL~El~~~~~~----~~lg~~~k-P-----------iill~~~g~-~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~e 187 (211)
..++++.+..+.- ..+|.... + +-+.....+ ++.+ ..+-.++++|-++... ..+-.++.+
T Consensus 250 ~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~-~~~~~l~~~g~l~~~~--~~~~l~~~~ 326 (345)
T 3jv7_A 250 QSTIDTAQQVVAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSEL-MEVVALARAGRLDIHT--ETFTLDEGP 326 (345)
T ss_dssp HHHHHHHHHHEEEEEEEEECSCCTTCCEEESTTTSCTTCEEECCCSCCHHHH-HHHHHHHHTTCCCCCE--EEECSTTHH
T ss_pred HHHHHHHHHHHhcCCEEEEECCCCCCCCCcCHHHHhCCCEEEEEecCCHHHH-HHHHHHHHcCCCceEE--EEEcHHHHH
Confidence 6566665543310 00111111 1 111111111 1223 3334567788887632 355578888
Q ss_pred HHHHHhhhhc
Q 028256 188 ELICKLEVFF 197 (211)
Q Consensus 188 e~~~~l~~~~ 197 (211)
|+++.+.+-.
T Consensus 327 ~A~~~~~~~~ 336 (345)
T 3jv7_A 327 AAYRRLREGS 336 (345)
T ss_dssp HHHHHHHHTC
T ss_pred HHHHHHHcCC
Confidence 8888887644
No 135
>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*
Probab=40.47 E-value=28 Score=28.81 Aligned_cols=42 Identities=5% Similarity=-0.019 Sum_probs=19.7
Q ss_pred HHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 6 QQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 6 ~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++-+.+.....+.++|.|.|++.. ....|.+.|.++|+.|+.
T Consensus 7 ~~~~~~~~~~~~~~~vlVtGatG~--------iG~~l~~~L~~~G~~V~~ 48 (347)
T 4id9_A 7 HHHHSSGLVPRGSHMILVTGSAGR--------VGRAVVAALRTQGRTVRG 48 (347)
T ss_dssp --------------CEEEETTTSH--------HHHHHHHHHHHTTCCEEE
T ss_pred CCCCCCcccccCCCEEEEECCCCh--------HHHHHHHHHHhCCCEEEE
Confidence 333333344445678999976552 345677777888887653
No 136
>1f4p_A Flavodoxin; electron transport, flavoprotein, FMN, 3D-STRCTURE, anisotropic refinement, redox protein; HET: FMN; 1.30A {Desulfovibrio vulgaris} SCOP: c.23.5.1 PDB: 1bu5_A* 1c7f_A* 1c7e_A* 1akr_A* 1fx1_A* 1akt_A* 1akq_A* 1aku_A* 1akv_A* 1azl_A* 1j8q_A* 2fx2_A* 3fx2_A* 4fx2_A* 5fx2_A* 1akw_A* 1i1o_A* 1wsw_A* 1wsb_A* 1xyv_A* ...
Probab=40.42 E-value=19 Score=26.19 Aligned_cols=31 Identities=16% Similarity=0.468 Sum_probs=20.4
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
+|.|+.+|..++. .+.|+.+++.|.+.|+.+
T Consensus 2 ki~iiy~S~~Gnt---~~~a~~i~~~l~~~g~~v 32 (147)
T 1f4p_A 2 KALIVYGSTTGNT---EYTAETIARELADAGYEV 32 (147)
T ss_dssp EEEEEEECSSSHH---HHHHHHHHHHHHHHTCEE
T ss_pred eEEEEEECCcCHH---HHHHHHHHHHHHhcCCee
Confidence 4555556776642 356788888887777765
No 137
>1agx_A Glutaminase-asparaginase; bacterial amidohydrolase; 2.90A {Acinetobacter glutaminasificans} SCOP: c.88.1.1
Probab=40.35 E-value=49 Score=28.46 Aligned_cols=49 Identities=18% Similarity=0.200 Sum_probs=34.9
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..++++.- . .+|||||.+.- --.|...+++..
T Consensus 82 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 135 (331)
T 1agx_A 82 SVNGVVITHG-TDTMEETAFFLNLVV-H-TDKPIVLVGSMRPSTALSADGPLNLYSA 135 (331)
T ss_dssp TCCEEEEECC-GGGHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEecC-cchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCchhHHHHHHH
Confidence 4689999875 799999999888553 3 68999998541 134555665544
No 138
>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}
Probab=40.30 E-value=83 Score=25.79 Aligned_cols=55 Identities=18% Similarity=0.262 Sum_probs=31.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++|-|.|+|+ + ..+++++.|+++|+.|+..+-..---+.+.+.....|+.+..+.
T Consensus 32 k~vlVTGas~-g-------IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 86 (301)
T 3tjr_A 32 RAAVVTGGAS-G-------IGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVV 86 (301)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEE
Confidence 4566665543 2 35678888999999987665332222333333334566666553
No 139
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=40.28 E-value=1.7e+02 Score=24.66 Aligned_cols=116 Identities=12% Similarity=0.119 Sum_probs=55.9
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCcee
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEV 98 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~ 98 (211)
++|.+.+|..-| +.--|..|+++|.++|+.|.+=|...|+ |. +-+-++|-....+ |..-.+. ......
T Consensus 3 ~~i~i~~GGTgG----Hi~palala~~L~~~g~~V~~vg~~~g~-e~--~~v~~~g~~~~~i-~~~~~~~----~~~~~~ 70 (365)
T 3s2u_A 3 GNVLIMAGGTGG----HVFPALACAREFQARGYAVHWLGTPRGI-EN--DLVPKAGLPLHLI-QVSGLRG----KGLKSL 70 (365)
T ss_dssp CEEEEECCSSHH----HHHHHHHHHHHHHHTTCEEEEEECSSST-HH--HHTGGGTCCEEEC-C----------------
T ss_pred CcEEEEcCCCHH----HHHHHHHHHHHHHhCCCEEEEEECCchH-hh--chhhhcCCcEEEE-ECCCcCC----CCHHHH
Confidence 467777653222 4445778999999999999765445464 32 2233444443333 2111111 111111
Q ss_pred ee-----c-CCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC
Q 028256 99 KA-----V-SGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD 153 (211)
Q Consensus 99 ~~-----~-~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~ 153 (211)
+. . .....|+.+--..-|++|...|-..-.- ...++- .++|+++...+
T Consensus 71 ~~~~~~~~~~~~~~~~~l~~~~PDvVi~~g~~~s~p~-~laA~~------~~iP~vihe~n 124 (365)
T 3s2u_A 71 VKAPLELLKSLFQALRVIRQLRPVCVLGLGGYVTGPG-GLAARL------NGVPLVIHEQN 124 (365)
T ss_dssp --CHHHHHHHHHHHHHHHHHHCCSEEEECSSSTHHHH-HHHHHH------TTCCEEEEECS
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCCEEEEcCCcchHHH-HHHHHH------cCCCEEEEecc
Confidence 10 1 1113444444455787777655443222 222222 57899988655
No 140
>1wsa_A Asparaginase, asparagine amidohydrolase; periplasmic; 2.20A {Wolinella succinogenes} SCOP: c.88.1.1
Probab=40.27 E-value=53 Score=28.24 Aligned_cols=49 Identities=20% Similarity=0.235 Sum_probs=35.0
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..++++.- . .+|||||.+.- --.|...+++..
T Consensus 83 ~~dG~VItHG-TDTmeeTA~~Ls~~l-~-~~kPVVlTGAmrP~~~~~sDg~~NL~~A 136 (330)
T 1wsa_A 83 ETEAVIITHG-TDTMEETAFFLNLTV-K-SQKPVVLVGAMRPGSSMSADGPMNLYNA 136 (330)
T ss_dssp TCCCEEEECC-SSSHHHHHHHHHHHC-C-CSSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCEEEEEcC-cchHHHHHHHHHHHc-C-CCCCEEEeCCCCCCCCCCCchHHHHHHH
Confidence 4789999975 799999999888653 3 68999998552 134556665544
No 141
>2fp4_B Succinyl-COA ligase [GDP-forming] beta-chain, mitochondrial; active site phosphohistidine residue; HET: NEP GTP; 2.08A {Sus scrofa} SCOP: c.23.4.1 d.142.1.4 PDB: 2fpg_B* 2fpi_B* 2fpp_B* 1euc_B* 1eud_B*
Probab=40.01 E-value=1.6e+02 Score=25.90 Aligned_cols=71 Identities=18% Similarity=0.128 Sum_probs=42.7
Q ss_pred cCEEE-EecCCcCcHHHHHHHHHHH--HhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCHHHHHH
Q 028256 115 ADAFI-ALPGGYGTLEELLEVITWA--QLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELIC 191 (211)
Q Consensus 115 sDa~I-vlpGG~GTL~El~~~~~~~--~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~ 191 (211)
.|+++ .+.||+=.-+++.+.+.-. .++ +++||++--.+.-++.-.+ .+.+.| ++ ++.++|++++.+
T Consensus 318 v~~ilvni~ggi~~~d~vA~gii~a~~~~~-~~~Pivvrl~G~n~~~g~~---~L~~~g-l~------~~~~~~~~~Aa~ 386 (395)
T 2fp4_B 318 VEAILVNIFGGIVNCAIIANGITKACRELE-LKVPLVVRLEGTNVHEAQN---ILTNSG-LP------ITSAVDLEDAAK 386 (395)
T ss_dssp CCEEEEEEEESSSCHHHHHHHHHHHHHHHT-CCSCEEEEEEETTHHHHHH---HHHHTC-SC------CEECSSHHHHHH
T ss_pred CCEEEEEecCCccCcHHHHHHHHHHHHhcC-CCCeEEEEcCCCCHHHHHH---HHHHCC-Cc------eEeCCCHHHHHH
Confidence 46644 4668887788887765422 222 5799997422212333333 333434 22 667799999999
Q ss_pred Hhhhh
Q 028256 192 KLEVF 196 (211)
Q Consensus 192 ~l~~~ 196 (211)
.+.+.
T Consensus 387 ~~v~~ 391 (395)
T 2fp4_B 387 KAVAS 391 (395)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 87654
No 142
>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...
Probab=39.83 E-value=1.1e+02 Score=25.90 Aligned_cols=82 Identities=20% Similarity=0.184 Sum_probs=39.5
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeec----CCHHHHHHHHHH-hcCEEEEecC
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAV----SGMHQRKAEMAR-QADAFIALPG 123 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~----~~~~~Rk~~m~~-~sDa~IvlpG 123 (211)
..||+|+|..|+ ++..-|+..|. +|+++-.+.. ..+.. .-..+..+.. .++.++-..+.. ..|++|-.-|
T Consensus 194 ~VlV~GaG~vG~--~a~qla~~~Ga~~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g 270 (374)
T 2jhf_A 194 TCAVFGLGGVGL--SVIMGCKAAGAARIIGVDINKD-KFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIG 270 (374)
T ss_dssp EEEEECCSHHHH--HHHHHHHHTTCSEEEEECSCGG-GHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred EEEEECCCHHHH--HHHHHHHHcCCCeEEEEcCCHH-HHHHHHHhCCceEecccccchhHHHHHHHHhCCCCcEEEECCC
Confidence 456888654444 34556777787 7888743221 11110 0111222221 234333222211 3577777777
Q ss_pred CcCcHHHHHHHH
Q 028256 124 GYGTLEELLEVI 135 (211)
Q Consensus 124 G~GTL~El~~~~ 135 (211)
+.-++++.+..+
T Consensus 271 ~~~~~~~~~~~l 282 (374)
T 2jhf_A 271 RLDTMVTALSCC 282 (374)
T ss_dssp CHHHHHHHHHHB
T ss_pred CHHHHHHHHHHh
Confidence 655666555443
No 143
>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*
Probab=39.82 E-value=72 Score=26.35 Aligned_cols=45 Identities=9% Similarity=-0.054 Sum_probs=28.5
Q ss_pred cchHHHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 2 ETQQQQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
++..++...... -.+++|.|.|++.. ....+.+.|+++|+.|+.-
T Consensus 13 ~~~~~~~~~~~~--~~~~~vlVtGatG~--------iG~~l~~~L~~~g~~V~~~ 57 (352)
T 1sb8_A 13 MSRYEELRKELP--AQPKVWLITGVAGF--------IGSNLLETLLKLDQKVVGL 57 (352)
T ss_dssp CCHHHHHHHHHH--HSCCEEEEETTTSH--------HHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHhhchhcC--ccCCeEEEECCCcH--------HHHHHHHHHHHCCCEEEEE
Confidence 444444444433 34678999976552 3467888888899987643
No 144
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=39.64 E-value=51 Score=27.37 Aligned_cols=70 Identities=21% Similarity=0.298 Sum_probs=41.9
Q ss_pred HHHHHHHhcCEEEEec---CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEc
Q 028256 107 RKAEMARQADAFIALP---GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSA 183 (211)
Q Consensus 107 Rk~~m~~~sDa~Ivlp---GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~ 183 (211)
....++..||++|... .|+|+ =+.|+++ .++|||..+..| +.+ ++.++ ....+.-.
T Consensus 275 ~~~~~~~~adv~v~ps~~~e~~~~--~~~Ea~a------~G~PvI~~~~~~----~~e----~i~~~-----~~g~~~~~ 333 (406)
T 2gek_A 275 TKASAMRSADVYCAPHLGGESFGI--VLVEAMA------AGTAVVASDLDA----FRR----VLADG-----DAGRLVPV 333 (406)
T ss_dssp HHHHHHHHSSEEEECCCSCCSSCH--HHHHHHH------HTCEEEECCCHH----HHH----HHTTT-----TSSEECCT
T ss_pred HHHHHHHHCCEEEecCCCCCCCch--HHHHHHH------cCCCEEEecCCc----HHH----HhcCC-----CceEEeCC
Confidence 3456778899888753 34553 4667776 689999876532 222 22211 11222333
Q ss_pred CCHHHHHHHhhhhc
Q 028256 184 QTAHELICKLEVFF 197 (211)
Q Consensus 184 ~d~ee~~~~l~~~~ 197 (211)
+|++++.+.|.+..
T Consensus 334 ~d~~~l~~~i~~l~ 347 (406)
T 2gek_A 334 DDADGMAAALIGIL 347 (406)
T ss_dssp TCHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHH
Confidence 78898888887654
No 145
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=39.54 E-value=67 Score=26.16 Aligned_cols=42 Identities=10% Similarity=0.104 Sum_probs=22.2
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-..--.+.+.+...+.|+.+..+
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 82 (283)
T 3v8b_A 41 GRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIAL 82 (283)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 456777788888887655432111222233333345555554
No 146
>3dbi_A Sugar-binding transcriptional regulator, LACI FAM; structural genomics, sugar-binding transcriptional regulator structure initiative, PSI-2; HET: MSE; 2.45A {Escherichia coli K12}
Probab=39.32 E-value=1.5e+02 Score=24.03 Aligned_cols=44 Identities=7% Similarity=0.080 Sum_probs=31.2
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGG 58 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg 58 (211)
..+.++|+|+.......++-|.+....+-+.+.++|+.++.-..
T Consensus 58 ~~~~~~Igvi~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~ 101 (338)
T 3dbi_A 58 AKSTQTLGLVVTNTLYHGIYFSELLFHAARMAEEKGRQLLLADG 101 (338)
T ss_dssp --CCSEEEEEECTTTTSTTHHHHHHHHHHHHHHHTTCEEEEEEC
T ss_pred hCCCCEEEEEecCCcccChhHHHHHHHHHHHHHHCCCEEEEEeC
Confidence 34567899997653234677778888888888899998866543
No 147
>1t1j_A Hypothetical protein; structural genomics, PSI, protein structure initiative, MIDW center for structural genomics, MCSG; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.14.2
Probab=39.25 E-value=23 Score=26.47 Aligned_cols=39 Identities=23% Similarity=0.260 Sum_probs=28.9
Q ss_pred HHHHHHHhcCEEEEe--cC---CcCcHHHHHHHHHHHHhCCCCCcEEEEe
Q 028256 107 RKAEMARQADAFIAL--PG---GYGTLEELLEVITWAQLGIHDKPVGLLN 151 (211)
Q Consensus 107 Rk~~m~~~sDa~Ivl--pG---G~GTL~El~~~~~~~~lg~~~kPiill~ 151 (211)
-...++..||+++|+ || +.|--.|+-.+-. .++||.+++
T Consensus 75 ~~~~lL~~CdevwV~~L~Gw~~S~Gm~~Ei~~A~~------~g~pV~~~~ 118 (125)
T 1t1j_A 75 VDAFYMDHLEELIVLDLPGWRDSAGIRREMEFFEA------GGQRVSLWS 118 (125)
T ss_dssp HHHHHHHHCSEEEECCCTTGGGCHHHHHHHHHHHH------TTCEEEEHH
T ss_pred HHHHHHHhCCeeEEEecCCCCCChhHHHHHHHHHH------CCCcEEEEc
Confidence 345577899997655 68 6788889877665 688998654
No 148
>2a5l_A Trp repressor binding protein WRBA; APC5760, PA0949, protein structure initiative, PSI, structural genomics; 1.70A {Pseudomonas aeruginosa} SCOP: c.23.5.8 PDB: 1zwk_A 1zwl_A*
Probab=39.15 E-value=28 Score=26.52 Aligned_cols=33 Identities=15% Similarity=0.103 Sum_probs=22.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
|++|.|+.+|..++ -.+.|+.+.+.+.+.|+.+
T Consensus 5 M~kilii~~S~~g~---T~~la~~i~~~l~~~g~~v 37 (200)
T 2a5l_A 5 SPYILVLYYSRHGA---TAEMARQIARGVEQGGFEA 37 (200)
T ss_dssp CCEEEEEECCSSSH---HHHHHHHHHHHHHHTTCEE
T ss_pred cceEEEEEeCCCCh---HHHHHHHHHHHHhhCCCEE
Confidence 45677776776442 3467788888888777654
No 149
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=39.09 E-value=45 Score=27.06 Aligned_cols=42 Identities=12% Similarity=0.049 Sum_probs=23.4
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-..---+.+.+...+.|+.+..+
T Consensus 41 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 82 (270)
T 3ftp_A 41 GRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGA 82 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 467888889999988755433111223333333445555544
No 150
>2buf_A Acetylglutamate kinase; acetyglutamate kinase, ADP, arginine biosynthesis, FEED-BACK inhibition, hexamer, transferase; HET: NLG ADP; 2.95A {Pseudomonas aeruginosa} SCOP: c.73.1.2
Probab=39.03 E-value=1e+02 Score=25.64 Aligned_cols=43 Identities=19% Similarity=0.082 Sum_probs=24.6
Q ss_pred cCcceE-EEEeCCCCCCCHHHHHHHHHHHHHHHHcCC--eEEecCCC
Q 028256 16 SRFKRV-CVFCGSSPGKSPSYQLAAIQLGKQLVERNI--DLVYGGGS 59 (211)
Q Consensus 16 ~~~~~I-~Vfggs~~~~~~~~~~~A~~lG~~la~~g~--~lv~GGg~ 59 (211)
.++++| -=+|||...........++++.. |.+.|+ .||.|||+
T Consensus 24 ~~~k~iVIKlGGs~l~~~~~~~~~~~~i~~-l~~~G~~vVlVhGgG~ 69 (300)
T 2buf_A 24 FVGKTLVIKYGGNAMESEELKAGFARDVVL-MKAVGINPVVVHGGGP 69 (300)
T ss_dssp HTTCEEEEEECCTTTTSSHHHHHHHHHHHH-HHHTTCEEEEEECCCH
T ss_pred hcCCeEEEEECchhhCCchHHHHHHHHHHH-HHHCCCeEEEEECCcH
Confidence 344454 44555555433445556666654 455676 46899865
No 151
>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}
Probab=38.98 E-value=57 Score=26.35 Aligned_cols=29 Identities=31% Similarity=0.440 Sum_probs=21.5
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 30 ~vlVTGas~-gIG~aia~~la~~G~~V~~~ 58 (266)
T 3uxy_A 30 VALVTGAAG-GIGGAVVTALRAAGARVAVA 58 (266)
T ss_dssp EEEESSTTS-HHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 467888765 88778888777777777665
No 152
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=38.69 E-value=32 Score=28.95 Aligned_cols=30 Identities=30% Similarity=0.406 Sum_probs=22.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
...|+.|| . |.+-.+++.....+-.++||-
T Consensus 77 d~vi~~GG-D-GT~l~a~~~~~~~~~pvlgi~ 106 (307)
T 1u0t_A 77 ELVLVLGG-D-GTFLRAAELARNASIPVLGVN 106 (307)
T ss_dssp CCEEEEEC-H-HHHHHHHHHHHHHTCCEEEEE
T ss_pred CEEEEEeC-C-HHHHHHHHHhccCCCCEEEEe
Confidence 44445554 5 999888888887777889984
No 153
>3tov_A Glycosyl transferase family 9; structural genomics, PSI-BIOL protein structure initiative, midwest center for structural genomics, MCSG; 2.98A {Veillonella parvula}
Probab=38.47 E-value=1.8e+02 Score=24.47 Aligned_cols=104 Identities=13% Similarity=0.021 Sum_probs=53.7
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHh-cCCeEEEEecCcCCCCCCCCCCCc
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYD-GGRHVLGVIPKTLMPREITGDTVG 96 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~-~gG~viGv~P~~~~~~e~~~~~~~ 96 (211)
.+.|++.-||+......-.+.=.++++.|.++|+.+|.=||+ += ...++...+ .+..++-
T Consensus 185 ~~~i~i~pga~~~~k~wp~~~~~~l~~~l~~~g~~vvl~g~~-~e-~~~~~~i~~~~~~~~~~----------------- 245 (349)
T 3tov_A 185 DILIGFNIGSAVPEKRWPAERFAHVADYFGRLGYKTVFFGGP-MD-LEMVQPVVEQMETKPIV----------------- 245 (349)
T ss_dssp CCEEEEECCCSSGGGCCCHHHHHHHHHHHHHHTCEEEECCCT-TT-HHHHHHHHHTCSSCCEE-----------------
T ss_pred CCEEEEeCCCCCccCCCCHHHHHHHHHHHHhCCCeEEEEeCc-ch-HHHHHHHHHhcccccEE-----------------
Confidence 457888877764321100122246777787779988776655 32 333333332 1111110
Q ss_pred eeeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEE-eCC
Q 028256 97 EVKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLL-NVD 153 (211)
Q Consensus 97 ~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill-~~~ 153 (211)
+.-..++.+ ...++..||++|..-.| ++.= +.+ .++|++.+ +.+
T Consensus 246 -l~g~~sl~e-~~ali~~a~~~i~~DsG--~~Hl---Aaa------~g~P~v~lfg~t 290 (349)
T 3tov_A 246 -ATGKFQLGP-LAAAMNRCNLLITNDSG--PMHV---GIS------QGVPIVALYGPS 290 (349)
T ss_dssp -CTTCCCHHH-HHHHHHTCSEEEEESSH--HHHH---HHT------TTCCEEEECSSC
T ss_pred -eeCCCCHHH-HHHHHHhCCEEEECCCC--HHHH---HHh------cCCCEEEEECCC
Confidence 001224444 55577889988876554 4331 222 57888865 443
No 154
>1ykg_A SIR-FP, sulfite reductase [NADPH] flavoprotein alpha- component; electron transport; HET: FMN; NMR {Escherichia coli} SCOP: c.23.5.2
Probab=38.01 E-value=11 Score=28.55 Aligned_cols=34 Identities=15% Similarity=0.336 Sum_probs=20.0
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
..|++|.|+.+|..++. .+.|+.+++.|.+.|+.
T Consensus 7 ~~~~ki~I~Y~S~tGnT---~~~A~~ia~~l~~~g~~ 40 (167)
T 1ykg_A 7 AEMPGITIISASQTGNA---RRVAEALRDDLLAAKLN 40 (167)
T ss_dssp -----CEEEEECSSSHH---HHHHHHHHHHHHHHTCC
T ss_pred CCCCeEEEEEECCchHH---HHHHHHHHHHHHHCCCc
Confidence 34556666667777743 35678888888776654
No 155
>2gek_A Phosphatidylinositol mannosyltransferase (PIMA); GT4 glycosyltransferase, rossmann fold, complex; HET: GDP; 2.40A {Mycobacterium smegmatis} PDB: 2gej_A*
Probab=37.98 E-value=51 Score=27.33 Aligned_cols=38 Identities=18% Similarity=0.225 Sum_probs=24.5
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
.+||+|.+++........-....+..+++.|+++||.+
T Consensus 18 ~~~MkIl~i~~~~~~~~gG~~~~~~~l~~~L~~~G~~V 55 (406)
T 2gek_A 18 GSHMRIGMVCPYSFDVPGGVQSHVLQLAEVLRDAGHEV 55 (406)
T ss_dssp ---CEEEEECSSCTTSCCHHHHHHHHHHHHHHHTTCEE
T ss_pred CCcceEEEEeccCCCCCCcHHHHHHHHHHHHHHCCCeE
Confidence 34678999975432221223456789999999999876
No 156
>3hyn_A Putative signal transduction protein; DUF1863 family protein, nucleotide-binding protein, structur genomics; HET: MSE; 1.20A {Eubacterium rectale atcc 33656}
Probab=37.44 E-value=1.3e+02 Score=24.02 Aligned_cols=91 Identities=16% Similarity=0.057 Sum_probs=55.3
Q ss_pred cCCHHHHHHHHHHhcCEEEEecCCc-----CcHHHHHHHHHHHHhCCCCCcEEEEeCCccc---------hhHHHHHHHH
Q 028256 101 VSGMHQRKAEMARQADAFIALPGGY-----GTLEELLEVITWAQLGIHDKPVGLLNVDGYY---------NSLLSFIDKA 166 (211)
Q Consensus 101 ~~~~~~Rk~~m~~~sDa~IvlpGG~-----GTL~El~~~~~~~~lg~~~kPiill~~~g~~---------~~l~~~l~~~ 166 (211)
..++..|.+.=++.|+.+|++-|-. +...|+-.+. +..++|||.+..+ |- ..+...++.+
T Consensus 66 e~tIKrrLReRI~~Sk~vIllIs~~T~~s~~v~wEIe~Ai-----~~~~~PII~Vy~~-~~~~~~i~~~~g~~~~~~~~~ 139 (189)
T 3hyn_A 66 EKTLKPRLHTRLDNSKNIILFLSSITANSRALREEMNYGI-----GTKGLPVIVIYPD-YDKKSDIVDSNGNFKKQIKDL 139 (189)
T ss_dssp TTTHHHHHHHHHHTEEEEEEECCTTCCCCHHHHHHHHHHT-----TTTCCCEEEEETT-CCSGGGTBCTTSCBCHHHHHH
T ss_pred HHHHHHHHHHHHHhcCcEEEEEecCccccchhHHHHHHHH-----HhcCCcEEEEECC-ccccchhhhccccchhhHhhc
Confidence 4467777777789999999998874 3445555444 1368999999876 11 0111222222
Q ss_pred HHcCC---CCcccccceEEcCCHHHHHHHhhhhc
Q 028256 167 VDEGF---IAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 167 ~~~g~---i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
...-. ++......|++==.++-+...|.++-
T Consensus 140 wpk~p~~r~~~~~~~~ihVPf~~~~I~~Al~n~~ 173 (189)
T 3hyn_A 140 WDKLPAFRDNMSSVATLHIPCTKSVIISALNNED 173 (189)
T ss_dssp HHTCHHHHTTGGGSEEEEEESCHHHHHHHHTCGG
T ss_pred CCcchhhhccccCCceEEecCCHHHHHHHHhccc
Confidence 22111 22334456788888888888887653
No 157
>1ybd_A Uridylate kinase; alpha/beta/alpha fold, hexamer, structural genomics, structure initiative, PSI; 2.60A {Neisseria meningitidis} SCOP: c.73.1.3
Probab=37.36 E-value=1.5e+02 Score=23.39 Aligned_cols=41 Identities=22% Similarity=0.285 Sum_probs=23.1
Q ss_pred cCEEEEecCCc----CcHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 115 ADAFIALPGGY----GTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 115 sDa~IvlpGG~----GTL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
...++|++|+. ++-|.+...++ ..++. .+-+++-+++|.|+
T Consensus 126 ~g~ipVv~g~~g~~~~~~D~~Aa~lA-~~l~A-d~liilTdVdGvy~ 170 (239)
T 1ybd_A 126 EGKVVIFAAGTGNPFFTTDTAAALRG-AEMNC-DVMLKATNVDGVYT 170 (239)
T ss_dssp TTCEEEEESTTSSTTCCHHHHHHHHH-HHTTC-SEEEEECSSSSCBS
T ss_pred CCcEEEEECCccCCCCCcHHHHHHHH-HhcCC-CEEEEeeCCCccCC
Confidence 34455555543 47777766554 33332 34445558889885
No 158
>1rq8_A Conserved hypothetical protein; structural genomics, SAV1595, YHBY, UPF0044, unknown function; NMR {Staphylococcus aureus} SCOP: d.68.4.1
Probab=37.17 E-value=26 Score=25.34 Aligned_cols=58 Identities=16% Similarity=0.119 Sum_probs=36.8
Q ss_pred HHhCCCCCcEEEEeCCccchhHHHHHHH-HHHcCCCCcccccceEEcCCHHHHHHHhhhhc
Q 028256 138 AQLGIHDKPVGLLNVDGYYNSLLSFIDK-AVDEGFIAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 138 ~~lg~~~kPiill~~~g~~~~l~~~l~~-~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
..++.+-+|++.++.+|..+.+++.++. +-....|.-+.... ..+|.+++.+.|++-.
T Consensus 11 R~~ah~Lkpvv~IGK~GlTe~vi~ei~~aL~~hELIKVkvl~~--~~~d~~e~a~~la~~t 69 (104)
T 1rq8_A 11 RSLAHNIDPIFQIGKGGINENMIKQIDDTLENRELIKVHVLQN--NFDDKKELAETLSEAT 69 (104)
T ss_dssp HHHTTSSCCSCEECSSSCCHHHHHHHHHHHHHSSEEEEEECCC--CHHHHHHHHHHHHHHH
T ss_pred HHHhcCCCCeEEECCCCCCHHHHHHHHHHHHHCCcEEEEEeCC--CHHHHHHHHHHHHHHh
Confidence 3344456899999999999999998854 55555554111110 1345566677776654
No 159
>1vl1_A 6PGL, 6-phosphogluconolactonase; TM1154, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO hydrolase; HET: CIT; 1.55A {Thermotoga maritima} SCOP: c.124.1.1 PDB: 1pbt_A
Probab=37.09 E-value=99 Score=24.97 Aligned_cols=79 Identities=15% Similarity=0.145 Sum_probs=42.2
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchh------HHHHHH-HHHHcCCCCcccccceEEcCCH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS------LLSFID-KAVDEGFIAPAARYIIVSAQTA 186 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~------l~~~l~-~~~~~g~i~~~~~~~i~~~~d~ 186 (211)
..++.|+|+|| .|...+++.+. +....-+-|.+++.+.||-+ ...++. .+.+.--+++.....+....|+
T Consensus 44 ~~~~~l~LsgG-sTp~~ly~~L~--~~~i~w~~v~~f~~DEr~vp~~~~~Sn~~~~~~~l~~~v~i~~~~i~~~~~~~~~ 120 (232)
T 1vl1_A 44 KDKIFVVLAGG-RTPLPVYEKLA--EQKFPWNRIHFFLSDERYVPLDSDQSNFRNINEVLFSRAKIPSGNVHYVDTSLPI 120 (232)
T ss_dssp CSCEEEEECCS-TTHHHHHHHHT--TSCCCGGGEEEEESEEESSCTTSTTCHHHHHHHHTTTTSCCCGGGEECCCTTSCH
T ss_pred CCCeEEEEcCC-ccHHHHHHHHH--HcCCChhHEEEEeCeEeecCCCChHHHHHHHHHHHhccCCCCHHHEecCCCCCCH
Confidence 45789999988 67778887665 11121246777777777622 334443 2332211233322222223477
Q ss_pred HHHHHHhhh
Q 028256 187 HELICKLEV 195 (211)
Q Consensus 187 ee~~~~l~~ 195 (211)
++..+..++
T Consensus 121 e~~~~~y~~ 129 (232)
T 1vl1_A 121 EKACEKYER 129 (232)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 766655544
No 160
>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2
Probab=36.97 E-value=37 Score=27.61 Aligned_cols=31 Identities=13% Similarity=0.050 Sum_probs=22.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+++- ..+.+++.|+++|+.|+..+
T Consensus 45 k~vlITGasgg--------IG~~la~~L~~~G~~V~~~~ 75 (285)
T 2c07_A 45 KVALVTGAGRG--------IGREIAKMLAKSVSHVICIS 75 (285)
T ss_dssp CEEEEESTTSH--------HHHHHHHHHTTTSSEEEEEE
T ss_pred CEEEEECCCcH--------HHHHHHHHHHHcCCEEEEEc
Confidence 56777766542 35678888899999987644
No 161
>3p0r_A Azoreductase; structural genomics, center for structural genomics of infec diseases, csgid, oxidoreductase; 1.80A {Bacillus anthracis}
Probab=36.59 E-value=60 Score=25.53 Aligned_cols=38 Identities=8% Similarity=-0.039 Sum_probs=21.8
Q ss_pred cCcceEEEEeCCCC-CCCHHHHHHHHHHHHHHHHc--CCeE
Q 028256 16 SRFKRVCVFCGSSP-GKSPSYQLAAIQLGKQLVER--NIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~-~~~~~~~~~A~~lG~~la~~--g~~l 53 (211)
+.|++|.|+-||-. +.++.-.+.++.+.+.+.++ |+.+
T Consensus 2 ~mM~kiLiI~gSpr~~~~S~s~~l~~~~~~~~~~~~~g~ev 42 (211)
T 3p0r_A 2 NAMTKVLFVKANNRPAEQAVSVKLYEAFLASYKEAHPNDTV 42 (211)
T ss_dssp --CCEEEEEECCCSCTTTCHHHHHHHHHHHHHHHHCTTSEE
T ss_pred cccCEEEEEEeCCCCCCCCHHHHHHHHHHHHHHHhCCCCeE
Confidence 34677777766655 23444446667777766655 5544
No 162
>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}
Probab=36.54 E-value=1.1e+02 Score=24.83 Aligned_cols=63 Identities=13% Similarity=0.192 Sum_probs=0.0
Q ss_pred HHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCC-------hhHHHHHHHHhcCCeEEEE
Q 028256 10 AAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIG-------LMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 10 ~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~G-------lM~a~a~gA~~~gG~viGv 80 (211)
++..+.-+.+++-|-|+++ -..+++++.|+++|+.|+.-+-..- -.+.+.+...+.|+.+..+
T Consensus 1 gp~~m~l~~k~vlVTGas~--------GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 70 (285)
T 3sc4_A 1 GPGSMSLRGKTMFISGGSR--------GIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPI 70 (285)
T ss_dssp -----CCTTCEEEEESCSS--------HHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEE
T ss_pred CCCCcCCCCCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEE
No 163
>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*
Probab=36.47 E-value=1e+02 Score=25.93 Aligned_cols=79 Identities=22% Similarity=0.145 Sum_probs=39.3
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC--CCCCceeeecCCHHHHHHHHHHhcCEEEEecCCcCcH
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT--GDTVGEVKAVSGMHQRKAEMARQADAFIALPGGYGTL 128 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~--~~~~~~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL 128 (211)
..+|+|+|+.|++ +..-|+..|.+|+++...... .+.. .-..+.++..++- ++-..+....|++|-.-|+.-++
T Consensus 183 ~VlV~GaG~vG~~--a~qlak~~Ga~Vi~~~~~~~~-~~~~~~~lGa~~vi~~~~~-~~~~~~~~g~D~vid~~g~~~~~ 258 (357)
T 2cf5_A 183 RGGILGLGGVGHM--GVKIAKAMGHHVTVISSSNKK-REEALQDLGADDYVIGSDQ-AKMSELADSLDYVIDTVPVHHAL 258 (357)
T ss_dssp EEEEECCSHHHHH--HHHHHHHHTCEEEEEESSTTH-HHHHHTTSCCSCEEETTCH-HHHHHSTTTEEEEEECCCSCCCS
T ss_pred EEEEECCCHHHHH--HHHHHHHCCCeEEEEeCChHH-HHHHHHHcCCceeeccccH-HHHHHhcCCCCEEEECCCChHHH
Confidence 3568887554443 445566778889888653211 1110 1112233333332 11111123467777777766666
Q ss_pred HHHHH
Q 028256 129 EELLE 133 (211)
Q Consensus 129 ~El~~ 133 (211)
++.+.
T Consensus 259 ~~~~~ 263 (357)
T 2cf5_A 259 EPYLS 263 (357)
T ss_dssp HHHHT
T ss_pred HHHHH
Confidence 66554
No 164
>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*
Probab=36.31 E-value=55 Score=27.20 Aligned_cols=31 Identities=16% Similarity=0.234 Sum_probs=21.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
..||+|++. |+=-++++-|+..|.+|+++..
T Consensus 152 ~vlI~Ga~g-~iG~~~~~~a~~~Ga~Vi~~~~ 182 (336)
T 4b7c_A 152 TVVISGAAG-AVGSVAGQIARLKGCRVVGIAG 182 (336)
T ss_dssp EEEESSTTS-HHHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEEeC
Confidence 456888732 5545667778888889998854
No 165
>2x0d_A WSAF; GT4 family, transferase; HET: MSE; 2.28A {Geobacillus stearothermophilus} PDB: 2x0f_A* 2x0e_A*
Probab=35.92 E-value=78 Score=27.43 Aligned_cols=71 Identities=13% Similarity=-0.005 Sum_probs=45.2
Q ss_pred HHHHHHHHHhcCEEEEec--CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEE
Q 028256 105 HQRKAEMARQADAFIALP--GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVS 182 (211)
Q Consensus 105 ~~Rk~~m~~~sDa~Ivlp--GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~ 182 (211)
.+....+...||+||+.. -|+|.. ++|+++ .++|||. +..|.. +++. ......+.-
T Consensus 305 ~~~l~~~~~~adv~v~pS~~E~~g~~--~lEAmA------~G~PVV~-~~~g~~-e~v~------------~~~~G~lv~ 362 (413)
T 2x0d_A 305 LEDYADLLKRSSIGISLMISPHPSYP--PLEMAH------FGLRVIT-NKYENK-DLSN------------WHSNIVSLE 362 (413)
T ss_dssp HHHHHHHHHHCCEEECCCSSSSCCSH--HHHHHH------TTCEEEE-ECBTTB-CGGG------------TBTTEEEES
T ss_pred HHHHHHHHHhCCEEEEecCCCCCCcH--HHHHHh------CCCcEEE-eCCCcc-hhhh------------cCCCEEEeC
Confidence 344556778999888754 367753 577887 7999998 655543 2221 111222344
Q ss_pred cCCHHHHHHHhhhhc
Q 028256 183 AQTAHELICKLEVFF 197 (211)
Q Consensus 183 ~~d~ee~~~~l~~~~ 197 (211)
..|++++.+.|.+..
T Consensus 363 ~~d~~~la~ai~~ll 377 (413)
T 2x0d_A 363 QLNPENIAETLVELC 377 (413)
T ss_dssp SCSHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHH
Confidence 579999888887654
No 166
>3fni_A Putative diflavin flavoprotein A 3; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium; 2.30A {Nostoc SP} PDB: 2klb_A
Probab=35.91 E-value=45 Score=25.06 Aligned_cols=31 Identities=19% Similarity=0.167 Sum_probs=19.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
++|.|+.+|..++.. +.|+.+++.|.+.|+.
T Consensus 5 ~kv~IvY~S~~GnT~---~iA~~ia~~l~~~g~~ 35 (159)
T 3fni_A 5 TSIGVFYVSEYGYSD---RLAQAIINGITKTGVG 35 (159)
T ss_dssp CEEEEEECTTSTTHH---HHHHHHHHHHHHTTCE
T ss_pred CEEEEEEECCChHHH---HHHHHHHHHHHHCCCe
Confidence 356666677766433 4567777777666654
No 167
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=35.77 E-value=2.1e+02 Score=24.53 Aligned_cols=67 Identities=13% Similarity=0.066 Sum_probs=40.2
Q ss_pred HHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCH
Q 028256 107 RKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTA 186 (211)
Q Consensus 107 Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ 186 (211)
.-..++..||++|.=.||. . .|+.. .++|++.++...-|... ++.|.. +.+-.|+
T Consensus 275 ~~~~l~~~adlvvt~SGgv--~---~EA~a------lG~Pvv~~~~~ter~e~-------v~~G~~-------~lv~~d~ 329 (385)
T 4hwg_A 275 DYVKLQMNAFCILSDSGTI--T---EEASI------LNLPALNIREAHERPEG-------MDAGTL-------IMSGFKA 329 (385)
T ss_dssp HHHHHHHHCSEEEECCTTH--H---HHHHH------TTCCEEECSSSCSCTHH-------HHHTCC-------EECCSSH
T ss_pred HHHHHHHhCcEEEECCccH--H---HHHHH------cCCCEEEcCCCccchhh-------hhcCce-------EEcCCCH
Confidence 3556788999888555542 2 34455 68999998653223332 233321 2323588
Q ss_pred HHHHHHhhhhcc
Q 028256 187 HELICKLEVFFF 198 (211)
Q Consensus 187 ee~~~~l~~~~~ 198 (211)
+++.+.+.+...
T Consensus 330 ~~i~~ai~~ll~ 341 (385)
T 4hwg_A 330 ERVLQAVKTITE 341 (385)
T ss_dssp HHHHHHHHHHHT
T ss_pred HHHHHHHHHHHh
Confidence 888888876653
No 168
>1req_B Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 1e1c_B* 2req_B* 3req_B* 4req_B* 5req_B* 6req_B* 7req_B*
Probab=35.69 E-value=67 Score=30.41 Aligned_cols=49 Identities=14% Similarity=0.056 Sum_probs=40.8
Q ss_pred CCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 30 GKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 30 ~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+.+..+-..+.-+...++..|+.++++|+..- +.+++.|.+.+..++|+
T Consensus 518 g~Da~Hd~ga~~va~~l~~aGfeVi~~g~~~t--ee~v~aa~e~~adiv~l 566 (637)
T 1req_B 518 GTRRDFGGREGFSSPVWHIAGIDTPQVEGGTT--AEIVEAFKKSGAQVADL 566 (637)
T ss_dssp SCHHHHHHHHHHHHHHHHHTTCBCCEEECCCH--HHHHHHHHHHTCSEEEE
T ss_pred CCchhhhhhHHHHHHHHHhCCeeEEeCCCCCC--HHHHHHHHhcCCCEEEE
Confidence 33446666677777788899999999988755 99999999999999999
No 169
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=35.61 E-value=17 Score=28.62 Aligned_cols=33 Identities=18% Similarity=0.186 Sum_probs=22.7
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
.++|.|+.+|..++.. +.|+.+++.|.+.|+.+
T Consensus 21 ~~kv~IvY~S~tGnTe---~~A~~ia~~l~~~g~~v 53 (191)
T 1bvy_F 21 NTPLLVLYGSNMGTAE---GTARDLADIAMSKGFAP 53 (191)
T ss_dssp CCCEEEEEECSSSHHH---HHHHHHHHHHHTTTCCC
T ss_pred CCeEEEEEECCChHHH---HHHHHHHHHHHhCCCce
Confidence 4566666678877543 56788888888777653
No 170
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=35.60 E-value=1.5e+02 Score=22.87 Aligned_cols=73 Identities=11% Similarity=0.040 Sum_probs=33.7
Q ss_pred eEEecCCCCChhHHHHHHHHhcC-CeEEEEecCcCCCCCCCCCCCceeeecCCHH--HHHHHHHHhcCEEEEecCCcCc
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGG-RHVLGVIPKTLMPREITGDTVGEVKAVSGMH--QRKAEMARQADAFIALPGGYGT 127 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~g-G~viGv~P~~~~~~e~~~~~~~~~~~~~~~~--~Rk~~m~~~sDa~IvlpGG~GT 127 (211)
.||+||.. |+=.++++...+.| -.|+.+.-+.....+..... .+. +..|+. +--..+++..|++|..-|+...
T Consensus 26 vlVtGatG-~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~~~~-~~~-~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~ 101 (236)
T 3qvo_A 26 VLILGAGG-QIARHVINQLADKQTIKQTLFARQPAKIHKPYPTN-SQI-IMGDVLNHAALKQAMQGQDIVYANLTGEDL 101 (236)
T ss_dssp EEEETTTS-HHHHHHHHHHTTCTTEEEEEEESSGGGSCSSCCTT-EEE-EECCTTCHHHHHHHHTTCSEEEEECCSTTH
T ss_pred EEEEeCCc-HHHHHHHHHHHhCCCceEEEEEcChhhhcccccCC-cEE-EEecCCCHHHHHHHhcCCCEEEEcCCCCch
Confidence 46666642 55555566555555 35555421111001111111 122 222332 1122345678999988777544
No 171
>3pfn_A NAD kinase; structural genomics consortium, SNP, SGC, transferase; 2.70A {Homo sapiens}
Probab=35.55 E-value=82 Score=27.63 Aligned_cols=62 Identities=21% Similarity=0.158 Sum_probs=42.9
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE------------------------------------------E
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL------------------------------------------V 54 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l------------------------------------------v 54 (211)
.+++|+|++= . .++...+.+++|.++|.++|+.+ |
T Consensus 37 ~~k~I~iv~K--~-~~~~~~~~~~~l~~~L~~~~~~V~ve~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~DlvI 113 (365)
T 3pfn_A 37 SPKSVLVIKK--M-RDASLLQPFKELCTHLMEENMIVYVEKKVLEDPAIASDESFGAVKKKFCTFREDYDDISNQIDFII 113 (365)
T ss_dssp CCCEEEEEEC--T-TCGGGHHHHHHHHHHHHHTSCEEEEEHHHHHSHHHHHCSTTHHHHHHCEEECTTTCCCTTTCSEEE
T ss_pred CCCEEEEEec--C-CCHHHHHHHHHHHHHHHHCCCEEEEehHHhhhhccccccccccccccccccccChhhcccCCCEEE
Confidence 4688999953 2 35667788889999888766532 3
Q ss_pred ecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 55 YGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 55 ~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
+=||. |.|=-+++-....+-.++||-.
T Consensus 114 ~lGGD-GT~L~aa~~~~~~~~PvlGiN~ 140 (365)
T 3pfn_A 114 CLGGD-GTLLYASSLFQGSVPPVMAFHL 140 (365)
T ss_dssp EESST-THHHHHHHHCSSSCCCEEEEES
T ss_pred EEcCh-HHHHHHHHHhccCCCCEEEEcC
Confidence 34455 8887777766666678999843
No 172
>3b6i_A Flavoprotein WRBA; flavoproteins, NADH:quinone oxidoreductase, FMN; HET: FMN 15P; 1.66A {Escherichia coli} PDB: 2r96_A* 2r97_A 2rg1_A* 3b6j_A* 3b6k_A* 3b6m_A*
Probab=35.55 E-value=29 Score=26.34 Aligned_cols=33 Identities=15% Similarity=0.161 Sum_probs=20.9
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHH-cCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVE-RNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~-~g~~l 53 (211)
|++|.|+.+|..++ -.+.|+.+.+.+.+ .|+.+
T Consensus 1 Mmkilii~~S~~g~---t~~la~~i~~~l~~~~g~~v 34 (198)
T 3b6i_A 1 MAKVLVLYYSMYGH---IETMARAVAEGASKVDGAEV 34 (198)
T ss_dssp -CEEEEEECCSSSH---HHHHHHHHHHHHHTSTTCEE
T ss_pred CCeEEEEEeCCCcH---HHHHHHHHHHHHhhcCCCEE
Confidence 34666666775432 34678888888877 67643
No 173
>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*
Probab=35.47 E-value=33 Score=28.18 Aligned_cols=38 Identities=8% Similarity=-0.026 Sum_probs=20.8
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
-+++++.|+++|+.|+.-.-. +.......+.++.++.+
T Consensus 15 G~aia~~la~~Ga~V~~~~~~----~~~~~~~~~~~~~~~~~ 52 (247)
T 3ged_A 15 GKQICLDFLEAGDKVCFIDID----EKRSADFAKERPNLFYF 52 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEESC----HHHHHHHHTTCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCC----HHHHHHHHHhcCCEEEE
Confidence 356777777778777644322 33333344445555555
No 174
>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*
Probab=35.36 E-value=96 Score=24.96 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=0.0
Q ss_pred CcchHHHHHHHhhhhcCc--------ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHh
Q 028256 1 METQQQQQQAAAALKSRF--------KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYD 72 (211)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~--------~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~ 72 (211)
|++..++.+........+ ++|.|.|+++ -..+.+++.|+++|+.|+.-+-...-.+...+...+
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~l~~k~vlITGasg--------giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~ 72 (302)
T 1w6u_A 1 MNTEALQSKFFSPLQKAMLPPNSFQGKVAFITGGGT--------GLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISS 72 (302)
T ss_dssp -CHHHHHHHHSCCCCSCCSCTTTTTTCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHH
T ss_pred CCCcCCcccccccccCCCCCcccCCCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHH
Q ss_pred c-CCeEEEE
Q 028256 73 G-GRHVLGV 80 (211)
Q Consensus 73 ~-gG~viGv 80 (211)
. +..+..+
T Consensus 73 ~~~~~~~~~ 81 (302)
T 1w6u_A 73 QTGNKVHAI 81 (302)
T ss_dssp HHSSCEEEE
T ss_pred hcCCceEEE
No 175
>3r8s_O 50S ribosomal protein L18; protein biosynthesis, RNA, tRNA, transfer RNA, 23S ribosomal subunit, ribosome recycling factor, RRF, ribosome; 3.00A {Escherichia coli} PDB: 3fik_O 3j19_O 2wwq_O 3oat_O* 3oas_O* 3ofd_O 3ofc_O 3ofr_O* 3ofz_O* 3og0_O 3ofq_O 3r8t_O 3i1n_O 1p85_M 1p86_M 1vs8_O 1vs6_O 2aw4_O 2awb_O 1vt2_O ...
Probab=35.26 E-value=90 Score=22.82 Aligned_cols=40 Identities=25% Similarity=0.414 Sum_probs=29.1
Q ss_pred HHHHHHHHHHHHH----cCCe-EEe--cC-CCCChhHHHHHHHHhcCC
Q 028256 36 QLAAIQLGKQLVE----RNID-LVY--GG-GSIGLMGLVSQAVYDGGR 75 (211)
Q Consensus 36 ~~~A~~lG~~la~----~g~~-lv~--GG-g~~GlM~a~a~gA~~~gG 75 (211)
.+.|+.+|+.||+ .|+. +|+ || -+-|-..|++++|.++|-
T Consensus 67 ~~AA~~vG~llA~Ral~~GI~~vvfDrgg~~yhGrV~Ala~~are~Gl 114 (116)
T 3r8s_O 67 KDAAAAVGKAVAERALEKGIKDVSFDRSGFQYHGRVQALADAAREAGL 114 (116)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCCCEEECTTSCSSSHHHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHhCC
Confidence 3678999999987 3553 222 33 246899999999999873
No 176
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=35.23 E-value=80 Score=25.87 Aligned_cols=55 Identities=20% Similarity=0.249 Sum_probs=34.2
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++++.-|++.+ .-+.+++.||++|..|+.-+-..--.+.+++...+.|++++.+.
T Consensus 8 KvalVTGas~G-------IG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~ 62 (254)
T 4fn4_A 8 KVVIVTGAGSG-------IGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVK 62 (254)
T ss_dssp CEEEEETTTSH-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEeCCCCH-------HHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 44555455544 24567888889999987655332233445555566788888774
No 177
>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}
Probab=35.16 E-value=30 Score=29.14 Aligned_cols=39 Identities=10% Similarity=-0.025 Sum_probs=24.1
Q ss_pred HHHHcCCCCcccccceEEcCCHHHHHHHhhhhccCceeEEe
Q 028256 165 KAVDEGFIAPAARYIIVSAQTAHELICKLEVFFFFFFWLFS 205 (211)
Q Consensus 165 ~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~~~~~~~~ 205 (211)
+++.+|-+++.. ..+-.++.+|+++.+.+-....+-..+
T Consensus 304 ~l~~~g~l~~~~--~~~~l~~~~~A~~~~~~~~~~gKvVi~ 342 (348)
T 3two_A 304 DFSIKHNIYPEI--DLILGKDIDTAYHNLTHGKAKFRYVID 342 (348)
T ss_dssp HHHHHTTCCCCE--EEECGGGHHHHHHHHHTTCCCSEEEEE
T ss_pred HHHHhCCCCceE--EEEEHHHHHHHHHHHHcCCCceEEEEe
Confidence 455677777643 355677888888888765443344333
No 178
>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2
Probab=35.15 E-value=68 Score=25.35 Aligned_cols=67 Identities=9% Similarity=-0.136 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhcCcceEEEEeCC--CCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 5 QQQQQAAAALKSRFKRVCVFCGS--SPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 5 ~~~~~~~~~~~~~~~~I~Vfggs--~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.++.+.+.....+.++|-|.|++ +- ..+.+++.|+++|+.|+.-+-. .--....+...+..+.+..+
T Consensus 1 ~~~~~~~~~~~~~~k~vlITGa~~~~g--------iG~~ia~~l~~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~ 69 (271)
T 3ek2_A 1 MAHHHHHHMGFLDGKRILLTGLLSNRS--------IAYGIAKACKREGAELAFTYVG-DRFKDRITEFAAEFGSELVF 69 (271)
T ss_dssp --------CCTTTTCEEEECCCCSTTS--------HHHHHHHHHHHTTCEEEEEESS-GGGHHHHHHHHHHTTCCCEE
T ss_pred CCCCCCCCccccCCCEEEEeCCCCCCc--------HHHHHHHHHHHcCCCEEEEecc-hhhHHHHHHHHHHcCCcEEE
No 179
>1zq1_A Glutamyl-tRNA(Gln) amidotransferase subunit D; X-RAY, 3D structure, asparaginase 1 family, GATD subfamily, lyase; 3.00A {Pyrococcus abyssi} SCOP: b.38.3.1 c.88.1.1
Probab=35.12 E-value=73 Score=28.68 Aligned_cols=50 Identities=14% Similarity=0.155 Sum_probs=35.6
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC-----ccchhHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD-----GYYNSLLSFIDK 165 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~-----g~~~~l~~~l~~ 165 (211)
..|+|||+.| .-||+|-..+++++- ...+|||||.+.- --.|...+++..
T Consensus 168 ~~DG~VItHG-TDTMeeTA~~Lsl~l-~~~~KPVVlTGAqrP~~~~~sDg~~NL~~A 222 (438)
T 1zq1_A 168 GDYGVVVAHG-TDTMGYTAAALSFML-RNLGKPVVLVGAQRSSDRPSSDAAMNLICS 222 (438)
T ss_dssp TCSEEEEECC-SSSHHHHHHHHHHHE-ESCCSCEEEECCSSCTTSTTCSHHHHHHHH
T ss_pred CCCeEEEecC-chhHHHHHHHHHHHH-hCCCCCEEEeCCCCCCCCCCcchHHHHHHH
Confidence 5799999975 799999998887643 2357999998652 134556666554
No 180
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=34.56 E-value=48 Score=22.19 Aligned_cols=26 Identities=12% Similarity=0.208 Sum_probs=19.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
+.|.|||.+. ..+...+..|.+.|+.
T Consensus 54 ~~ivvyC~~g--------~rs~~a~~~L~~~G~~ 79 (94)
T 1wv9_A 54 RPLLLVCEKG--------LLSQVAALYLEAEGYE 79 (94)
T ss_dssp SCEEEECSSS--------HHHHHHHHHHHHHTCC
T ss_pred CCEEEEcCCC--------ChHHHHHHHHHHcCCc
Confidence 7899999754 1356677788888987
No 181
>4dzz_A Plasmid partitioning protein PARF; deviant walker BOX, DNA segregation, unknown function; HET: ADP; 1.80A {Escherichia coli} PDB: 4e03_A* 4e07_A* 4e09_A*
Probab=34.55 E-value=53 Score=24.70 Aligned_cols=34 Identities=15% Similarity=0.320 Sum_probs=23.6
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
|+.|+|+ |...+.... ..|..|+..||++|..++
T Consensus 1 M~vi~v~-s~kgG~GKT--t~a~~la~~la~~g~~vl 34 (206)
T 4dzz_A 1 MKVISFL-NPKGGSGKT--TAVINIATALSRSGYNIA 34 (206)
T ss_dssp CEEEEEC-CSSTTSSHH--HHHHHHHHHHHHTTCCEE
T ss_pred CeEEEEE-eCCCCccHH--HHHHHHHHHHHHCCCeEE
Confidence 4567766 445454543 568899999999987653
No 182
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=34.51 E-value=50 Score=27.62 Aligned_cols=37 Identities=14% Similarity=0.050 Sum_probs=24.4
Q ss_pred CcceEEEEeCCCCC-CCHHHHHHHHHHHHHHHHcCCeE
Q 028256 17 RFKRVCVFCGSSPG-KSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 17 ~~~~I~Vfggs~~~-~~~~~~~~A~~lG~~la~~g~~l 53 (211)
|.|+|++++.+-.+ ...-....+.+|++.|+++||.+
T Consensus 1 r~MkIl~v~~~~~p~~~gG~~~~~~~la~~L~~~G~~V 38 (439)
T 3fro_A 1 RHMKVLLLGFEFLPVKVGGLAEALTAISEALASLGHEV 38 (439)
T ss_dssp CCCEEEEECSCCTTSCSSSHHHHHHHHHHHHHHTTCEE
T ss_pred CceEEEEEecccCCcccCCHHHHHHHHHHHHHHCCCeE
Confidence 35689988654322 11112355789999999999977
No 183
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=34.43 E-value=1.2e+02 Score=24.46 Aligned_cols=42 Identities=14% Similarity=0.210 Sum_probs=25.7
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-...--+.+.+...+.|+.+..+
T Consensus 46 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 87 (275)
T 4imr_A 46 GAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQEL 87 (275)
T ss_dssp HHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEE
Confidence 456778888888887655433344445555455556666555
No 184
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=34.34 E-value=88 Score=25.64 Aligned_cols=58 Identities=14% Similarity=0.187 Sum_probs=36.8
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
-.-++++.-|++.+ .-+.+++.|+++|..|+.-+-..---+.+++...+.|++++.+.
T Consensus 7 L~gKvalVTGas~G-------IG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~ 64 (255)
T 4g81_D 7 LTGKTALVTGSARG-------LGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVA 64 (255)
T ss_dssp CTTCEEEETTCSSH-------HHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECC
T ss_pred CCCCEEEEeCCCcH-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 34466666666654 34678889999999998766432223344444556678877763
No 185
>3se7_A VANA; alpha-beta structure, D-alanine-D-lactate ligase, ligase; HET: ATP; 3.07A {}
Probab=34.24 E-value=22 Score=30.20 Aligned_cols=37 Identities=11% Similarity=0.159 Sum_probs=27.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++|+|.+|..+...+.=...|..+.+.|-+.||.++.
T Consensus 4 ~~v~vl~GG~s~e~~vSl~sa~~v~~al~~~g~~v~~ 40 (346)
T 3se7_A 4 MKIGIIFGGVSEEHDISVKSAREVATHLGTGVFEPFY 40 (346)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CEEEEEeeecCCCccHHHHHHHHHHHHhcccCCEEEE
Confidence 4677766655555555567888999999889998863
No 186
>2i2c_A Probable inorganic polyphosphate/ATP-NAD kinase 1; NADP bound of lmnadk1, transferase; HET: DTA PG4; 1.85A {Listeria monocytogenes egd-e} PDB: 2i1w_A* 2i2a_A* 2i2b_A* 2i29_A* 2i2d_A* 2i2e_A* 3v7u_A* 3v7w_A* 3v7y_A* 3v80_A* 3v8m_A* 3v8n_A* 3v8p_A* 4dy6_A* 2i2f_A* 2q5f_A* 3v8q_A* 3v8r_A*
Probab=34.23 E-value=39 Score=27.90 Aligned_cols=50 Identities=12% Similarity=0.201 Sum_probs=30.2
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCC-CCCcEEEEeCC--ccc-----hhHHHHHHHHHH
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGI-HDKPVGLLNVD--GYY-----NSLLSFIDKAVD 168 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~-~~kPiill~~~--g~~-----~~l~~~l~~~~~ 168 (211)
.+|. |+.-||=||+.+.+..+. +. .+.|++-+|.+ ||. +++.+.++.+.+
T Consensus 35 ~~D~-vv~lGGDGT~l~aa~~~~----~~~~~~PilGIn~G~lgfl~~~~~~~~~~~l~~l~~ 92 (272)
T 2i2c_A 35 EPEI-VISIGGDGTFLSAFHQYE----ERLDEIAFIGIHTGHLGFYADWRPAEADKLVKLLAK 92 (272)
T ss_dssp SCSE-EEEEESHHHHHHHHHHTG----GGTTTCEEEEEESSSCCSSCCBCGGGHHHHHHHHHT
T ss_pred CCCE-EEEEcCcHHHHHHHHHHh----hcCCCCCEEEEeCCCCCcCCcCCHHHHHHHHHHHHc
Confidence 3564 455578999999876553 11 26787766653 555 344455555544
No 187
>1jo0_A Hypothetical protein HI1333; structural genomics, YHBY_HAEI structure 2 function project, S2F, unknown function; 1.37A {Haemophilus influenzae} SCOP: d.68.4.1 PDB: 1ln4_A
Probab=34.20 E-value=24 Score=25.15 Aligned_cols=54 Identities=19% Similarity=0.156 Sum_probs=35.7
Q ss_pred CCCcEEEEeCCccchhHHHHHHH-HHHcCCCCcccccceEEcCCHHHHHHHhhhhcc
Q 028256 143 HDKPVGLLNVDGYYNSLLSFIDK-AVDEGFIAPAARYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 143 ~~kPiill~~~g~~~~l~~~l~~-~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
+-+|++.++.+|..+.+++.++. +.....|.-+... ...+|.+++.+.|++-..
T Consensus 17 ~l~pvv~IGk~GlT~~vi~ei~~aL~~~ELIKVkvl~--~~~~~~~e~a~~la~~t~ 71 (98)
T 1jo0_A 17 HLNPVVMLGGNGLTEGVLAEIENALNHHELIKVKVAG--ADRETKQLIINAIVRETK 71 (98)
T ss_dssp TBCCSEEECTTCSCHHHHHHHHHHHHHHSEEEEEETT--CCHHHHHHHHHHHHHHHC
T ss_pred CCCCeEEECCCCCCHHHHHHHHHHHHHCCeEEEEEeC--CCHHHHHHHHHHHHHHhC
Confidence 45899999999999999999854 5555555422111 012456667777776543
No 188
>2xij_A Methylmalonyl-COA mutase, mitochondrial; isomerase, organic aciduria, vitamin B12; HET: B12 5AD BTB; 1.95A {Homo sapiens} PDB: 2xiq_A* 3bic_A
Probab=34.04 E-value=1.1e+02 Score=29.67 Aligned_cols=43 Identities=21% Similarity=0.183 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 38 AAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 38 ~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
-+.-++..|+..||.++++|.. =-.+.+++.|.+.+..+||+.
T Consensus 620 G~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVglS 662 (762)
T 2xij_A 620 GAKVIATGFADLGFDVDIGPLF-QTPREVAQQAVDADVHAVGVS 662 (762)
T ss_dssp HHHHHHHHHHHTTCEEEECCTT-CCHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHhCCeEEeeCCCC-CCHHHHHHHHHHcCCCEEEEe
Confidence 3455677888899999998865 446888899999999999993
No 189
>3ca8_A Protein YDCF; two domains, alpha/beta fold, helix bundle, structural genom structure 2 function project, S2F, unknown function; 1.80A {Escherichia coli}
Probab=33.72 E-value=39 Score=28.19 Aligned_cols=37 Identities=19% Similarity=0.107 Sum_probs=23.3
Q ss_pred hcCEEEEecCCc-CcHHHHHHHHHHHHhCCCCCcEEEEeCCcc
Q 028256 114 QADAFIALPGGY-GTLEELLEVITWAQLGIHDKPVGLLNVDGY 155 (211)
Q Consensus 114 ~sDa~IvlpGG~-GTL~El~~~~~~~~lg~~~kPiill~~~g~ 155 (211)
.+|++|||+||. +.+++..+.+. -+. .|+++-+..|.
T Consensus 36 ~~D~IVVLG~~~~~Rl~~A~~L~~---~g~--~~lIvSGG~g~ 73 (266)
T 3ca8_A 36 QADCVILAGNAVMPTIDAACKIAR---DQQ--IPLLISGGIGH 73 (266)
T ss_dssp CCSEEEEESCCCHHHHHHHHHHHH---HHT--CCEEEECCSST
T ss_pred CCCEEEECCCCchHHHHHHHHHHH---cCC--CcEEEECCCCC
Confidence 689999999986 55665555443 322 37766555444
No 190
>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}
Probab=33.53 E-value=1.1e+02 Score=24.30 Aligned_cols=12 Identities=25% Similarity=0.268 Sum_probs=8.4
Q ss_pred hcCEEEEecCCc
Q 028256 114 QADAFIALPGGY 125 (211)
Q Consensus 114 ~sDa~IvlpGG~ 125 (211)
.-|.+|-..|-.
T Consensus 103 ~id~li~nAg~~ 114 (269)
T 3gk3_A 103 KVDVLINNAGIT 114 (269)
T ss_dssp CCSEEEECCCCC
T ss_pred CCCEEEECCCcC
Confidence 468888777654
No 191
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=33.42 E-value=1.1e+02 Score=23.63 Aligned_cols=32 Identities=19% Similarity=0.296 Sum_probs=22.2
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+++|-|.|+++ + ..+++++.|+++|+.|+..+
T Consensus 2 ~k~vlITGas~-g-------IG~~ia~~l~~~G~~V~~~~ 33 (235)
T 3l77_A 2 MKVAVITGASR-G-------IGEAIARALARDGYALALGA 33 (235)
T ss_dssp CCEEEEESCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 45677776554 1 35678888889999887655
No 192
>3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti}
Probab=33.35 E-value=1.8e+02 Score=23.08 Aligned_cols=31 Identities=16% Similarity=0.241 Sum_probs=24.8
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
...|||||+. |+=.++++...+.|-+|+.+-
T Consensus 29 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~~ 59 (260)
T 3un1_A 29 KVVVITGASQ-GIGAGLVRAYRDRNYRVVATS 59 (260)
T ss_dssp CEEEESSCSS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 4577888875 888888998888888888763
No 193
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=33.25 E-value=37 Score=27.04 Aligned_cols=35 Identities=11% Similarity=0.205 Sum_probs=22.3
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
...+++|.|.|+++ + ..+++++.|+++|+.|+..+
T Consensus 4 ~~~~k~vlVTGas~-g-------IG~~~a~~l~~~G~~v~~~~ 38 (264)
T 3i4f_A 4 GRFVRHALITAGTK-G-------LGKQVTEKLLAKGYSVTVTY 38 (264)
T ss_dssp --CCCEEEETTTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred ccccCEEEEeCCCc-h-------hHHHHHHHHHHCCCEEEEEc
Confidence 34456666665543 2 34678888899999887653
No 194
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=33.21 E-value=91 Score=23.79 Aligned_cols=30 Identities=10% Similarity=0.158 Sum_probs=17.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHH-HcCCeEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLV-ERNIDLVYG 56 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la-~~g~~lv~G 56 (211)
++|.|.|+++. ..+.+.+.|+ ++|+.|+.-
T Consensus 6 k~vlVtGasg~--------iG~~~~~~l~~~~g~~V~~~ 36 (221)
T 3r6d_A 6 XYITILGAAGQ--------IAQXLTATLLTYTDMHITLY 36 (221)
T ss_dssp SEEEEESTTSH--------HHHHHHHHHHHHCCCEEEEE
T ss_pred EEEEEEeCCcH--------HHHHHHHHHHhcCCceEEEE
Confidence 34777755441 2355666666 677776543
No 195
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=33.13 E-value=55 Score=26.00 Aligned_cols=38 Identities=21% Similarity=0.222 Sum_probs=24.0
Q ss_pred hhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 12 AALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
....-..++|.|.|+|+ + ..+++++.|+++|+.|+.-+
T Consensus 13 ~~~~~~~k~vlVTGas~-g-------IG~~~a~~l~~~G~~V~~~~ 50 (249)
T 1o5i_A 13 MELGIRDKGVLVLAASR-G-------IGRAVADVLSQEGAEVTICA 50 (249)
T ss_dssp ---CCTTCEEEEESCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred HHhccCCCEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEc
Confidence 33334456777776654 2 34678888899999987654
No 196
>3r5x_A D-alanine--D-alanine ligase; alpha-beta structure, cytosol, structural genomics, for structural genomics of infectious diseases, csgid; HET: MSE ATP; 2.00A {Bacillus anthracis} PDB: 3r23_A*
Probab=33.11 E-value=15 Score=30.16 Aligned_cols=39 Identities=13% Similarity=0.123 Sum_probs=26.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
.++|+|.+|......+.-...++.+.+.|.+.||.++.=
T Consensus 3 ~m~v~vl~gg~s~e~~vs~~s~~~v~~al~~~g~~v~~i 41 (307)
T 3r5x_A 3 AMRIGVIMGGVSSEKQVSIMTGNEMIANLDKNKYEIVPI 41 (307)
T ss_dssp CEEEEEEECCSHHHHHHHHHHHHHHHHHSCTTTEEEEEE
T ss_pred CcEEEEEeCCCCcchHhHHHHHHHHHHHHHHCCCEEEEE
Confidence 357888876554323333456788888888899988653
No 197
>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}
Probab=32.93 E-value=38 Score=27.80 Aligned_cols=29 Identities=28% Similarity=0.401 Sum_probs=22.1
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 13 ~alVTGas~-GIG~aia~~la~~Ga~Vv~~ 41 (242)
T 4b79_A 13 QVLVTGGSS-GIGAAIAMQFAELGAEVVAL 41 (242)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 357888875 88888888888888877665
No 198
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=32.92 E-value=92 Score=25.16 Aligned_cols=43 Identities=12% Similarity=0.253 Sum_probs=26.3
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
.+.+++.|+++|+.|+..+-..--.+.+.+...+.|+.+..+.
T Consensus 17 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 59 (264)
T 3tfo_A 17 GEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQV 59 (264)
T ss_dssp HHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4678888899999987665332223334444445567766653
No 199
>2zki_A 199AA long hypothetical Trp repressor binding protein; alpha/beta structure, transcription; 2.90A {Sulfolobus tokodaii}
Probab=32.91 E-value=57 Score=24.78 Aligned_cols=32 Identities=19% Similarity=0.148 Sum_probs=20.6
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
|++|.|+.+| .++ -.+.|+.+.+.+.+.|+.+
T Consensus 4 mmkilii~~S-~g~---T~~la~~i~~~l~~~g~~v 35 (199)
T 2zki_A 4 KPNILVLFYG-YGS---IVELAKEIGKGAEEAGAEV 35 (199)
T ss_dssp CCEEEEEECC-SSH---HHHHHHHHHHHHHHHSCEE
T ss_pred CcEEEEEEeC-ccH---HHHHHHHHHHHHHhCCCEE
Confidence 4566666677 442 2366778888887777653
No 200
>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*
Probab=32.86 E-value=54 Score=25.15 Aligned_cols=71 Identities=4% Similarity=-0.069 Sum_probs=39.0
Q ss_pred eEEecCCCCChhHHHHHHHH-hcCCeEEEEecCcC-CCCCC--CCCCCceeeecCCHHHH--HHHHHHhcCEEEEecCCc
Q 028256 52 DLVYGGGSIGLMGLVSQAVY-DGGRHVLGVIPKTL-MPREI--TGDTVGEVKAVSGMHQR--KAEMARQADAFIALPGGY 125 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~-~~gG~viGv~P~~~-~~~e~--~~~~~~~~~~~~~~~~R--k~~m~~~sDa~IvlpGG~ 125 (211)
.+|+||+. |+=.++++... +.|-.|+.+.-+.. ...+. .... .+ ++..|+... -..+++..|++|..-|..
T Consensus 8 vlVtGasg-~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~~~~~~-~~-~~~~D~~d~~~~~~~~~~~d~vv~~ag~~ 84 (221)
T 3r6d_A 8 ITILGAAG-QIAQXLTATLLTYTDMHITLYGRQLKTRIPPEIIDHER-VT-VIEGSFQNPGXLEQAVTNAEVVFVGAMES 84 (221)
T ss_dssp EEEESTTS-HHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHHHTSTT-EE-EEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred EEEEeCCc-HHHHHHHHHHHhcCCceEEEEecCccccchhhccCCCc-eE-EEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence 68999863 77777888877 67878887742211 11111 1111 12 223333221 223456789998888753
No 201
>3v2d_S 50S ribosomal protein L18; ribosome associated inhibitor A, RAIA, protein Y, stress RES stationary phase, ribosome hibernation, ribosome; 2.70A {Thermus thermophilus} PDB: 1vsp_M 2hgj_R 2hgq_R 2hgu_R 1vsa_M 2j03_S 2jl6_S 2jl8_S 2v47_S 2v49_S 2wdi_S 2wdj_S 2wdl_S 2wdn_S 2wh2_S 2wh4_S 2wrj_S 2wrl_S 2wro_S 2wrr_S ...
Probab=32.66 E-value=65 Score=23.54 Aligned_cols=40 Identities=25% Similarity=0.380 Sum_probs=29.0
Q ss_pred HHHHHHHHHHHHH----cCCeE-Ee--cC-CCCChhHHHHHHHHhcCC
Q 028256 36 QLAAIQLGKQLVE----RNIDL-VY--GG-GSIGLMGLVSQAVYDGGR 75 (211)
Q Consensus 36 ~~~A~~lG~~la~----~g~~l-v~--GG-g~~GlM~a~a~gA~~~gG 75 (211)
.+.|+.+|+.||+ .|+.= |+ || -+.|-..|++++|.++|-
T Consensus 63 ~~AA~~vG~llA~ra~~~GI~~vvfDrgg~~yhGrV~Ala~~are~GL 110 (112)
T 3v2d_S 63 TEVARQVGRALAEKALALGIKQVAFDRGPYKYHGRVKALAEGAREGGL 110 (112)
T ss_dssp HHHHHHHHHHHHHHHHTTTCCBCEEECTTSCSCSSTTHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHHHHHHCCCCEEEEecCCCcccHHHHHHHHHHHHcCC
Confidence 4788899999987 36532 22 33 236889999999999873
No 202
>1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A*
Probab=32.65 E-value=71 Score=26.01 Aligned_cols=20 Identities=30% Similarity=0.230 Sum_probs=14.1
Q ss_pred Chh-HHHHHHHHhcCCeEEEE
Q 028256 61 GLM-GLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 61 GlM-~a~a~gA~~~gG~viGv 80 (211)
|-| .|+++.+.+.|..|+-+
T Consensus 34 g~iG~aiA~~~~~~Ga~V~l~ 54 (226)
T 1u7z_A 34 GKMGFAIAAAAARRGANVTLV 54 (226)
T ss_dssp SHHHHHHHHHHHHTTCEEEEE
T ss_pred cHHHHHHHHHHHHCCCEEEEE
Confidence 555 45577777888888766
No 203
>1j8f_A SIRT2, sirtuin 2, isoform 1, silencing INFO; gene regulation, transferase; 1.70A {Homo sapiens} SCOP: c.31.1.5
Probab=32.38 E-value=2.3e+02 Score=24.05 Aligned_cols=88 Identities=10% Similarity=0.023 Sum_probs=52.9
Q ss_pred HHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCc--cchhHHHHHHHHHHcCCC--Ccccccce
Q 028256 105 HQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDG--YYNSLLSFIDKAVDEGFI--APAARYII 180 (211)
Q Consensus 105 ~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g--~~~~l~~~l~~~~~~g~i--~~~~~~~i 180 (211)
.++-...++.+|.+|+++=+.=+. -++.+...-....|++++|.+. .-+.+..|+..+ ..|+- +.....-+
T Consensus 211 ~~~a~~~~~~aDlllviGTSl~V~----P~a~l~~~~~~~~~~v~IN~~~t~~~~~~~~~~~~~-~~~~~~~~~~~~~d~ 285 (323)
T 1j8f_A 211 FSCMQSDFLKVDLLLVMGTSLQVQ----PFASLISKAPLSTPRLLINKEKAGQSDPFLGMIMGL-GGGMDFDSKKAYRDV 285 (323)
T ss_dssp HHHHHHGGGSCSEEEEESSCSCSH----HHHHHHTTSCTTCCEEEEESSCCCCCCHHHHHHHHH-HTCCCSSSTTCCSEE
T ss_pred HHHHHHHHhCCCEEEEEeeCcccH----HHHHHHHHHHcCCcEEEEeCCCCCCCcccccccccc-cccccccccccceeE
Confidence 345555778899999986665552 2344433333357888898863 334455555432 33432 12233457
Q ss_pred EEcCCHHHHHHHhhhhc
Q 028256 181 VSAQTAHELICKLEVFF 197 (211)
Q Consensus 181 ~~~~d~ee~~~~l~~~~ 197 (211)
.+..|.++++..|.+..
T Consensus 286 ~i~gd~~~~l~~L~~~l 302 (323)
T 1j8f_A 286 AWLGECDQGCLALAELL 302 (323)
T ss_dssp EEESCHHHHHHHHHHHT
T ss_pred EEeCCHHHHHHHHHHHc
Confidence 78999999999887543
No 204
>2nu8_A Succinyl-COA ligase [ADP-forming] subunit alpha; citric acid cycle, heterotetramer, ligase, ATP-grAsp fold, R fold; HET: COA; 2.15A {Escherichia coli} SCOP: c.2.1.8 c.23.4.1 PDB: 2nu9_A* 2nu7_A* 2nua_A* 2nu6_A* 2scu_A* 1jll_A* 1scu_A* 1jkj_A* 1cqj_A* 1cqi_A*
Probab=32.31 E-value=1.2e+02 Score=25.22 Aligned_cols=82 Identities=11% Similarity=0.008 Sum_probs=46.6
Q ss_pred CHHHHHHHHHH--hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchh----------H--------HHH
Q 028256 103 GMHQRKAEMAR--QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNS----------L--------LSF 162 (211)
Q Consensus 103 ~~~~Rk~~m~~--~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~----------l--------~~~ 162 (211)
++.+=.+.|.+ ..+++++..-++|+.+|....+--. ..+|||+++..+ -..+ + ..+
T Consensus 186 ~~~d~l~~l~~D~~t~~I~l~~E~~~~~~~~~~~~~~~---~~~KPVv~~k~G-~~~~~g~~~~Htga~~~~~~g~~~~~ 261 (288)
T 2nu8_A 186 NFIDILEMFEKDPQTEAIVMIGEIGGSAEEEAAAYIKE---HVTKPVVGYIAG-VTAPKGKRMGHAGAIIAGGKGTADEK 261 (288)
T ss_dssp CHHHHHHHHHTCTTCCEEEEEEESSSSHHHHHHHHHHH---HCCSCEEEEEEC-TTCCTTCCCSSTTCCCCTTCCCHHHH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHHHh---cCCCCEEEEEeC-CCCcccccccchhhhhccCCccHHHH
Confidence 44444444444 3457777777778877765444322 257999998542 2221 0 001
Q ss_pred HHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhc
Q 028256 163 IDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 163 l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
-.-+.+. -+..++|++|+++.+++.+
T Consensus 262 ~aa~~~a---------Gv~~~~~~~el~~~~~~~~ 287 (288)
T 2nu8_A 262 FAALEAA---------GVKTVRSLADIGEALKTVL 287 (288)
T ss_dssp HHHHHHT---------TCEECSSGGGHHHHHHHHC
T ss_pred HHHHHHC---------CCeEeCCHHHHHHHHHHHh
Confidence 1112222 2678999999999988654
No 205
>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*
Probab=32.21 E-value=1.1e+02 Score=24.47 Aligned_cols=58 Identities=19% Similarity=0.050 Sum_probs=0.0
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec-CCCCChhHHHHHHHHhcCCeEEEE
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG-GGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G-Gg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+...++|-|-|+++ -..+.+++.|+++|+.++.. +-...--+.+.+...+.|+.+..+
T Consensus 1 M~~~k~vlVTGas~--------gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (258)
T 3oid_A 1 MEQNKCALVTGSSR--------GVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVV 59 (258)
T ss_dssp --CCCEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEE
T ss_pred CCCCCEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEE
No 206
>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1
Probab=32.20 E-value=2.2e+02 Score=23.66 Aligned_cols=30 Identities=33% Similarity=0.375 Sum_probs=19.3
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
..+|+|+|..|+ ++..-|+..|.+|+++-.
T Consensus 171 ~VlV~GaG~vG~--~a~qla~~~Ga~Vi~~~~ 200 (352)
T 1e3j_A 171 TVLVIGAGPIGL--VSVLAAKAYGAFVVCTAR 200 (352)
T ss_dssp EEEEECCSHHHH--HHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCHHHH--HHHHHHHHcCCEEEEEcC
Confidence 456888654443 445667778888888743
No 207
>3k5i_A Phosphoribosyl-aminoimidazole carboxylase; purine biosynthesis, ATP-grAsp, lyase; HET: NHE ADP AIR; 2.00A {Aspergillus clavatus} PDB: 3k5h_A*
Probab=32.02 E-value=2.4e+02 Score=24.15 Aligned_cols=17 Identities=12% Similarity=0.047 Sum_probs=10.6
Q ss_pred ceEEcCCHHHHHHHhhh
Q 028256 179 IIVSAQTAHELICKLEV 195 (211)
Q Consensus 179 ~i~~~~d~ee~~~~l~~ 195 (211)
-+.+++|++|+.+.+..
T Consensus 176 Gv~~v~~~~el~~a~~~ 192 (403)
T 3k5i_A 176 GNFRVNSQDDIPEALEA 192 (403)
T ss_dssp TEEEECSTTSHHHHHHH
T ss_pred CEEEECCHHHHHHHHHh
Confidence 46667777776665544
No 208
>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}
Probab=31.80 E-value=39 Score=27.85 Aligned_cols=30 Identities=23% Similarity=0.349 Sum_probs=25.6
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
-..|||||+. |+=.+.++...+.|.+|+.+
T Consensus 8 KvalVTGas~-GIG~aiA~~la~~Ga~Vv~~ 37 (254)
T 4fn4_A 8 KVVIVTGAGS-GIGRAIAKKFALNDSIVVAV 37 (254)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHcCCEEEEE
Confidence 3578999986 99999999999999988765
No 209
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=31.74 E-value=1.5e+02 Score=23.57 Aligned_cols=19 Identities=5% Similarity=0.188 Sum_probs=12.8
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 23 G~aia~~l~~~G~~V~~~~ 41 (262)
T 3pk0_A 23 GRGIATVFARAGANVAVAG 41 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567777777888776544
No 210
>1z0s_A Probable inorganic polyphosphate/ATP-NAD kinase; ATP-binding, structural genomics, NADP, PSI, protein structure initiative; HET: ATP; 1.70A {Archaeoglobus fulgidus} SCOP: e.52.1.1 PDB: 1z0u_A* 1z0z_A* 1suw_A*
Probab=31.64 E-value=49 Score=27.92 Aligned_cols=53 Identities=15% Similarity=0.255 Sum_probs=35.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE-----------------EecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL-----------------VYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l-----------------v~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++|+|+.-... + ++++.++|.++|+.+ +-|| . |.|-.+++..... -.++||-
T Consensus 30 mki~iv~~~~~---~-----~~~l~~~L~~~g~~v~~~~~~~~~~~~~DlvIvlGG-D-GT~L~aa~~~~~~-~PilGIN 98 (278)
T 1z0s_A 30 MRAAVVYKTDG---H-----VKRIEEALKRLEVEVELFNQPSEELENFDFIVSVGG-D-GTILRILQKLKRC-PPIFGIN 98 (278)
T ss_dssp CEEEEEESSST---T-----HHHHHHHHHHTTCEEEEESSCCGGGGGSSEEEEEEC-H-HHHHHHHTTCSSC-CCEEEEE
T ss_pred eEEEEEeCCcH---H-----HHHHHHHHHHCCCEEEEccccccccCCCCEEEEECC-C-HHHHHHHHHhCCC-CcEEEEC
Confidence 36999953222 2 678888898887754 4454 5 8886666655444 6889984
Q ss_pred c
Q 028256 82 P 82 (211)
Q Consensus 82 P 82 (211)
.
T Consensus 99 ~ 99 (278)
T 1z0s_A 99 T 99 (278)
T ss_dssp C
T ss_pred C
Confidence 3
No 211
>3r6w_A FMN-dependent NADH-azoreductase 1; nitrofurazone, P. aeruginosa, nitroreductase, flavodoxin, oxidoreductase; HET: FMN NFZ; 2.08A {Pseudomonas aeruginosa} PDB: 3lt5_A* 2v9c_A* 3keg_A*
Probab=31.64 E-value=71 Score=24.76 Aligned_cols=32 Identities=16% Similarity=0.103 Sum_probs=17.0
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVER 49 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~ 49 (211)
|++|.|+.||-...++.-...++.+.+.+.++
T Consensus 1 MmkiLii~gSpr~~~s~t~~l~~~~~~~~~~~ 32 (212)
T 3r6w_A 1 MSRILAVHASPRGERSQSRRLAEVFLAAYREA 32 (212)
T ss_dssp CCCEEEEECCSCSTTCHHHHHHHHHHHHHHHH
T ss_pred CCEEEEEEeCCCCCCCHHHHHHHHHHHHHHHh
Confidence 44555555555542333345566666666554
No 212
>3lyu_A Putative hydrogenase; the C-terminal has AN alpha-beta fold, structural genomics, PSI-2, protein structure initiative; 2.30A {Pyrococcus furiosus}
Probab=31.63 E-value=27 Score=25.83 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=25.3
Q ss_pred HHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCe
Q 028256 42 LGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRH 76 (211)
Q Consensus 42 lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~ 76 (211)
+.+.+.......||-+||.+.|+++.+.+.+.|-+
T Consensus 99 l~~~~~~~~~~~vy~CGP~~Mm~av~~~l~~~~~~ 133 (142)
T 3lyu_A 99 VRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGVP 133 (142)
T ss_dssp HHHHHHSSCCSEEEEESCHHHHHHHHHHHHHHTCC
T ss_pred HHHhcccCCCCEEEEECCHHHHHHHHHHHHHcCCc
Confidence 44445445566677777889999999999887743
No 213
>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2
Probab=31.62 E-value=1e+02 Score=24.60 Aligned_cols=71 Identities=8% Similarity=-0.134 Sum_probs=0.0
Q ss_pred cchHHHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 2 ETQQQQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 2 ~~~~~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
++..+-...+....-..++|.|.|+++ -..+.+++.|+++|+.|+.-+-..--.+.+.+...+.|+.+..+
T Consensus 15 ~~~~~~~~~~~~~~l~~k~vlITGasg--------gIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 85 (272)
T 1yb1_A 15 NLYFQGHMPKRRKSVTGEIVLITGAGH--------GIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTF 85 (272)
T ss_dssp ----------CCCCCTTCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred hheeccccCCcccccCCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEE
No 214
>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}
Probab=31.52 E-value=1.3e+02 Score=23.75 Aligned_cols=42 Identities=10% Similarity=0.152 Sum_probs=23.7
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+..+-..--.+.+.+...+.|+.+..+
T Consensus 42 G~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 83 (262)
T 3rkr_A 42 GAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESH 83 (262)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEE
Confidence 467788888889988765533122233333333455555544
No 215
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=31.25 E-value=1.3e+02 Score=23.95 Aligned_cols=54 Identities=11% Similarity=0.162 Sum_probs=28.6
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec-CCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG-GGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G-Gg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+++-|-|+++ + ..+++++.|+++|+.|+.. .....--+...+...+.|+.+..+
T Consensus 9 k~vlVTGas~-G-------IG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 63 (259)
T 3edm_A 9 RTIVVAGAGR-D-------IGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAI 63 (259)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEE
T ss_pred CEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEE
Confidence 4555665443 2 3467888888899988754 322222233333333445554444
No 216
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=31.02 E-value=1.4e+02 Score=24.08 Aligned_cols=42 Identities=10% Similarity=0.158 Sum_probs=23.7
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-...--+.+.+...+.|+.+..+
T Consensus 45 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 86 (276)
T 3r1i_A 45 GKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPI 86 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEE
Confidence 456777788888887655433233344444444455555544
No 217
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=30.94 E-value=90 Score=21.52 Aligned_cols=34 Identities=21% Similarity=0.330 Sum_probs=22.3
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe--EEecC
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID--LVYGG 57 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~--lv~GG 57 (211)
.+-+.|.|||.+. .+|...+..|.+.||. ++-||
T Consensus 54 ~~~~~ivvyC~~G--------~rs~~aa~~L~~~G~~~~~l~GG 89 (110)
T 2k0z_A 54 HKDKKVLLHCRAG--------RRALDAAKSMHELGYTPYYLEGN 89 (110)
T ss_dssp CSSSCEEEECSSS--------HHHHHHHHHHHHTTCCCEEEESC
T ss_pred CCCCEEEEEeCCC--------chHHHHHHHHHHCCCCEEEecCC
Confidence 4556789998553 2355677778888874 45554
No 218
>3tb6_A Arabinose metabolism transcriptional repressor; transcription regulation, arabinose binding, DNA binding Pro; HET: ARB; 2.21A {Bacillus subtilis}
Probab=30.92 E-value=1.9e+02 Score=22.57 Aligned_cols=37 Identities=11% Similarity=0.095 Sum_probs=28.3
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|+|+..+. .++-+.+....+-+.+.++|+.++.--
T Consensus 16 ~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~~ 52 (298)
T 3tb6_A 16 KTIGVLTTYI--SDYIFPSIIRGIESYLSEQGYSMLLTS 52 (298)
T ss_dssp CEEEEEESCS--SSTTHHHHHHHHHHHHHHTTCEEEEEE
T ss_pred ceEEEEeCCC--CchHHHHHHHHHHHHHHHCCCEEEEEe
Confidence 7899997543 356677778888888889999886654
No 219
>2csu_A 457AA long hypothetical protein; structural genomics, PH0766, riken ST genomics/proteomics initiative, RSGI, NPPSFA; 2.20A {Pyrococcus horikoshii} SCOP: c.2.1.8 c.23.4.1 c.23.4.1
Probab=30.88 E-value=1.9e+02 Score=25.73 Aligned_cols=130 Identities=15% Similarity=0.247 Sum_probs=62.4
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCc------CCCCC-CCCCCCceeeecCC---HHHHHHHHHH--hcCE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKT------LMPRE-ITGDTVGEVKAVSG---MHQRKAEMAR--QADA 117 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~------~~~~e-~~~~~~~~~~~~~~---~~~Rk~~m~~--~sDa 117 (211)
...+++-|| |+--.+++.+.+.|+.+--+.|.. ..|.. ...|++ ++.-..+ +...-+.+.+ ..|+
T Consensus 295 rvaiitngG--G~~~laaD~~~~~Gl~l~~l~~~t~~~L~~~lp~~~~~~NPl-Dl~g~a~~~~~~~al~~~l~dp~vd~ 371 (457)
T 2csu_A 295 KVAIMTNAG--GPGVLTADELDKRGLKLATLEEKTIEELRSFLPPMAAVKNPV-DMIASARGEDYYRTAKLLLQDPNVDM 371 (457)
T ss_dssp EEEEEESCH--HHHHHHHHHHHTTTCEECCCCHHHHHHHHHHSCTTCEESSEE-ECCTTCCHHHHHHHHHHHHHSTTCSE
T ss_pred cEEEEECCH--HHHHHHHHHHHHcCCCCCCCCHHHHHHHHHhCccccccCCCe-eCCCCCCHHHHHHHHHHHhcCCCCCE
Confidence 445666664 665667888888887642221100 01111 123332 2211122 2333334443 3577
Q ss_pred EEE--ecCCcC-c-----HHHHHHHHHHHHhCCCCCcEEEEeCCc-cchhHHHHHHHHHHcCCCCcccccceEEcCCHHH
Q 028256 118 FIA--LPGGYG-T-----LEELLEVITWAQLGIHDKPVGLLNVDG-YYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHE 188 (211)
Q Consensus 118 ~Iv--lpGG~G-T-----L~El~~~~~~~~lg~~~kPiill~~~g-~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee 188 (211)
+++ .|+.+| + .+++.+++. ++. .+||+++....| -.+... +.+.+.| +.+.+++++
T Consensus 372 vlv~~~~~~~Gg~~~~~~a~~i~~al~--~~~-~~kPvvv~~~~g~~~~~~~---~~L~~~G---------ip~~~spe~ 436 (457)
T 2csu_A 372 LIAICVVPTFAGMTLTEHAEGIIRAVK--EVN-NEKPVLAMFMAGYVSEKAK---ELLEKNG---------IPTYERPED 436 (457)
T ss_dssp EEEEEECCCSTTCCSSHHHHHHHHHHH--HHC-CCCCEEEEEECTTTTHHHH---HHHHTTT---------CCEESSHHH
T ss_pred EEEEccccccccCCchhHHHHHHHHHH--Hhc-CCCCEEEEeCCCcchHHHH---HHHHhCC---------CCccCCHHH
Confidence 554 244332 1 234555443 223 579999853332 122222 2333333 445699999
Q ss_pred HHHHhhhhc
Q 028256 189 LICKLEVFF 197 (211)
Q Consensus 189 ~~~~l~~~~ 197 (211)
+++.+....
T Consensus 437 Av~al~~l~ 445 (457)
T 2csu_A 437 VASAAYALV 445 (457)
T ss_dssp HHHHHHHHH
T ss_pred HHHHHHHHH
Confidence 999887643
No 220
>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}
Probab=30.87 E-value=1.2e+02 Score=20.21 Aligned_cols=13 Identities=23% Similarity=-0.021 Sum_probs=9.3
Q ss_pred HHhcCEEEEecCC
Q 028256 112 ARQADAFIALPGG 124 (211)
Q Consensus 112 ~~~sDa~IvlpGG 124 (211)
+..+|++|...|.
T Consensus 67 ~~~~d~vi~~~~~ 79 (118)
T 3ic5_A 67 LGGFDAVISAAPF 79 (118)
T ss_dssp TTTCSEEEECSCG
T ss_pred HcCCCEEEECCCc
Confidence 4578988887753
No 221
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=30.79 E-value=1.8e+02 Score=23.32 Aligned_cols=54 Identities=17% Similarity=0.228 Sum_probs=31.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
+++-|-|+++ + ..+.+++.|+++|+.|+.-+-. ---+...+...+.++.+..+.
T Consensus 32 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~ 85 (273)
T 3uf0_A 32 RTAVVTGAGS-G-------IGRAIAHGYARAGAHVLAWGRT-DGVKEVADEIADGGGSAEAVV 85 (273)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESS-THHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEcCH-HHHHHHHHHHHhcCCcEEEEE
Confidence 4555655443 2 3467888888899988765533 333444444455566666553
No 222
>4fu0_A D-alanine--D-alanine ligase 7; vancomycin resistance, peptidoglycan synthesis, D-Ala:D-Ser ATP-grAsp domain; HET: ADP; 2.35A {Enterococcus faecalis}
Probab=30.79 E-value=28 Score=29.74 Aligned_cols=36 Identities=14% Similarity=0.244 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
++|+|++|......+.=...|..+.+.|-+.||.++
T Consensus 4 kkv~vl~GG~S~E~evSl~Sa~~v~~aL~~~gy~v~ 39 (357)
T 4fu0_A 4 KKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDII 39 (357)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CEEEEEECCCccchHHHHHHHHHHHHHHhHhCCEEE
Confidence 578777554433333334567778888888898775
No 223
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=30.71 E-value=2.6e+02 Score=23.98 Aligned_cols=34 Identities=18% Similarity=0.201 Sum_probs=23.3
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc--CCe--EEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVER--NID--LVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~--g~~--lv~GG 57 (211)
++|+++.|++ |+|.+. ..|-+.|.++ ++. |+.+|
T Consensus 28 ~kI~~v~Gtr----~~~~~~-a~li~~l~~~~~~~~~~~~~tG 65 (403)
T 3ot5_A 28 IKVMSIFGTR----PEAIKM-APLVLALEKEPETFESTVVITA 65 (403)
T ss_dssp EEEEEEECSH----HHHHHH-HHHHHHHHTCTTTEEEEEEECC
T ss_pred ceEEEEEecC----hhHHHH-HHHHHHHHhCCCCCcEEEEEec
Confidence 4899888876 457666 5688888887 455 34444
No 224
>2vzf_A NADH-dependent FMN reductase; oxidoreductase; 2.50A {Edta-degrading bacterium BNC1} PDB: 2vzh_A* 2vzj_A*
Probab=30.59 E-value=72 Score=24.48 Aligned_cols=35 Identities=11% Similarity=0.004 Sum_probs=21.3
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHH-HHHcCCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQ-LVERNIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~-la~~g~~l 53 (211)
|++|.|+.||... ...-.+.|+.+.+. +.+.|+.+
T Consensus 2 Mmkilii~gS~r~-~g~t~~la~~i~~~~l~~~g~~v 37 (197)
T 2vzf_A 2 TYSIVAISGSPSR-NSTTAKLAEYALAHVLARSDSQG 37 (197)
T ss_dssp CEEEEEEECCSST-TCHHHHHHHHHHHHHHHHSSEEE
T ss_pred CceEEEEECCCCC-CChHHHHHHHHHHHHHHHCCCeE
Confidence 4567777666543 22334677778887 77766543
No 225
>1mvl_A PPC decarboxylase athal3A; flavoprotein, active site mutant C175S; HET: FMN; 2.00A {Arabidopsis thaliana} SCOP: c.34.1.1 PDB: 1mvn_A* 1e20_A*
Probab=30.56 E-value=19 Score=29.19 Aligned_cols=88 Identities=15% Similarity=0.147 Sum_probs=52.7
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHH-----hCC-CCCcEEEEeC--Cccchh--HHHHHHHHHHcCC--CCccccc
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQ-----LGI-HDKPVGLLNV--DGYYNS--LLSFIDKAVDEGF--IAPAARY 178 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~-----lg~-~~kPiill~~--~g~~~~--l~~~l~~~~~~g~--i~~~~~~ 178 (211)
+.+.+|++||.|-..+|+.-+..=++-.- +.. .++|+++.-. ..+|+. ...-|++|.+.|+ +++....
T Consensus 93 l~~~aD~mvIaPaTanTlAKiA~GiaDnLlt~~~~A~d~~~pvvlaPaMN~~M~e~P~t~~nl~~L~~~G~~ivpP~~g~ 172 (209)
T 1mvl_A 93 LRRWADVLVIAPLSANTLGKIAGGLCDNLLTCIIRAWDYTKPLFVAPAMNTLMWNNPFTERHLLSLDELGITLIPPIKKR 172 (209)
T ss_dssp HHHHCSEEEEEEECHHHHHHHHHTCCSSHHHHHHHTCCTTSCEEEEECCCHHHHHSHHHHHHHHHHHHHTCEECCCBC--
T ss_pred hcccCCEEEEecCCHHHHHHHHccccCcHHHHHHHHhcCCCCEEEEECCChhHhhChhHHHHHHHHHHCCCEEeCCcccc
Confidence 34679999999999999887764221111 111 2689998832 257754 2233566666665 3333311
Q ss_pred c------eEEcCCHHHHHHHhhhhcc
Q 028256 179 I------IVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 179 ~------i~~~~d~ee~~~~l~~~~~ 198 (211)
. .=-.-+++++++.+.+...
T Consensus 173 lacg~~G~gr~~~~~~Iv~~v~~~l~ 198 (209)
T 1mvl_A 173 LASGDYGNGAMAEPSLIYSTVRLFWE 198 (209)
T ss_dssp -------CCBCCCHHHHHHHHHHHHH
T ss_pred ccCCCcCCCCCCCHHHHHHHHHHHhC
Confidence 1 1135689999999987653
No 226
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=30.46 E-value=60 Score=25.76 Aligned_cols=12 Identities=25% Similarity=0.149 Sum_probs=7.2
Q ss_pred CHHHHHHHhhhh
Q 028256 185 TAHELICKLEVF 196 (211)
Q Consensus 185 d~ee~~~~l~~~ 196 (211)
+|+|+.+.+...
T Consensus 212 ~~~dva~~i~~l 223 (251)
T 3orf_A 212 PLSEVAEKLFEW 223 (251)
T ss_dssp CHHHHHHHHHHH
T ss_pred CHHHHHHHHHHH
Confidence 567766666543
No 227
>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}
Probab=30.39 E-value=1.9e+02 Score=24.06 Aligned_cols=31 Identities=23% Similarity=0.298 Sum_probs=20.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCe-EEEEec
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRH-VLGVIP 82 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~-viGv~P 82 (211)
...||+|+|..|++ +..-|+..|.. |+++..
T Consensus 181 ~~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~ 212 (363)
T 3m6i_A 181 DPVLICGAGPIGLI--TMLCAKAAGACPLVITDI 212 (363)
T ss_dssp CCEEEECCSHHHHH--HHHHHHHTTCCSEEEEES
T ss_pred CEEEEECCCHHHHH--HHHHHHHcCCCEEEEECC
Confidence 45668887654444 55667778876 777743
No 228
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=30.25 E-value=47 Score=27.67 Aligned_cols=52 Identities=17% Similarity=0.394 Sum_probs=30.8
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
+|+++-|++.+ .-+.+++.|+++|..|+.-+-. -+.+.+.+.+.|+.++.+.
T Consensus 30 KvalVTGas~G-------IG~aiA~~la~~Ga~V~i~~r~---~~~l~~~~~~~g~~~~~~~ 81 (273)
T 4fgs_A 30 KIAVITGATSG-------IGLAAAKRFVAEGARVFITGRR---KDVLDAAIAEIGGGAVGIQ 81 (273)
T ss_dssp CEEEEESCSSH-------HHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCcCCH-------HHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHcCCCeEEEE
Confidence 45555555543 2356777788888887655422 2444444555677776663
No 229
>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}
Probab=30.24 E-value=1.3e+02 Score=25.42 Aligned_cols=80 Identities=16% Similarity=0.124 Sum_probs=38.8
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCC-CCCCceeeec--CCHHHHHHHHHH--hcCEEEEecCCc
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREIT-GDTVGEVKAV--SGMHQRKAEMAR--QADAFIALPGGY 125 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~-~~~~~~~~~~--~~~~~Rk~~m~~--~sDa~IvlpGG~ 125 (211)
..||+|+|..|+ ++..-|+..|.+|+++..+.. ..+.. .-..+.++.. .++.++-..+.. ..|+++-..| .
T Consensus 192 ~VlV~G~G~vG~--~a~qla~~~Ga~Vi~~~~~~~-~~~~~~~lGa~~vi~~~~~~~~~~v~~~~~g~g~D~vid~~g-~ 267 (363)
T 3uog_A 192 RVVVQGTGGVAL--FGLQIAKATGAEVIVTSSSRE-KLDRAFALGADHGINRLEEDWVERVYALTGDRGADHILEIAG-G 267 (363)
T ss_dssp EEEEESSBHHHH--HHHHHHHHTTCEEEEEESCHH-HHHHHHHHTCSEEEETTTSCHHHHHHHHHTTCCEEEEEEETT-S
T ss_pred EEEEECCCHHHH--HHHHHHHHcCCEEEEEecCch-hHHHHHHcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECCC-h
Confidence 456777554343 345566778889998854321 00100 0011222221 344443333332 3576766666 3
Q ss_pred CcHHHHHHH
Q 028256 126 GTLEELLEV 134 (211)
Q Consensus 126 GTL~El~~~ 134 (211)
.++++.+..
T Consensus 268 ~~~~~~~~~ 276 (363)
T 3uog_A 268 AGLGQSLKA 276 (363)
T ss_dssp SCHHHHHHH
T ss_pred HHHHHHHHH
Confidence 566655443
No 230
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=30.21 E-value=2.1e+02 Score=23.86 Aligned_cols=67 Identities=10% Similarity=0.093 Sum_probs=38.6
Q ss_pred cceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 18 FKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 18 ~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
..-|.|.|++.... .++..+.. +.....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 47 v~gl~v~GtTGE~~~Ls~eEr~~v~-~~~~~~~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 118 (301)
T 1xky_A 47 TTAIVVGGTTGESPTLTSEEKVALY-RHVVSVVDKRVPVIAGTGSNNTHASIDLTKKATEVGVDAVMLVAPYY 118 (301)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHH-HHHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCEEEECccccChhhCCHHHHHHHH-HHHHHHhCCCceEEeCCCCCCHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 44566655444332 23333333 33333344457788888766777775 5667788887777766544
No 231
>2ako_A Glutamate 5-kinase; structural genomics, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics, nysgxrc; HET: ADP; 2.20A {Campylobacter jejuni} SCOP: c.73.1.3
Probab=30.17 E-value=1.3e+02 Score=24.06 Aligned_cols=25 Identities=16% Similarity=0.100 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHcCCeEEecCC
Q 028256 34 SYQLAAIQLGKQLVERNIDLVYGGG 58 (211)
Q Consensus 34 ~~~~~A~~lG~~la~~g~~lv~GGg 58 (211)
...+.|+++..........||.|||
T Consensus 23 ~~~~~~~~i~~l~~~~~vVlVhgGg 47 (251)
T 2ako_A 23 RLKNLVAFLAKLMEKYEVILVTSAA 47 (251)
T ss_dssp HHHHHHHHHHHHHHHSEEEEEECCH
T ss_pred HHHHHHHHHHHHHhCCCEEEEECCH
Confidence 4445566665544443456788887
No 232
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=30.17 E-value=2e+02 Score=23.97 Aligned_cols=39 Identities=10% Similarity=0.104 Sum_probs=24.5
Q ss_pred HHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 47 VERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 47 a~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 77 ~~grvpViaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 117 (303)
T 2wkj_A 77 AKGKIKLIAHVGCVSTAESQQLAASAKRYGFDAVSAVTPFY 117 (303)
T ss_dssp HTTTSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred hCCCCcEEEecCCCCHHHHHHHHHHHHhCCCCEEEecCCCC
Confidence 33456777777665666665 4556677777666655443
No 233
>3i12_A D-alanine-D-alanine ligase A; D-alanyl-alanine synthetase A, ADP binding protein, csgid, A binding, cell shape; HET: ADP; 2.20A {Salmonella typhimurium} PDB: 3q1k_A*
Probab=30.13 E-value=29 Score=29.76 Aligned_cols=37 Identities=16% Similarity=0.207 Sum_probs=27.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++|+|++|......+.-...|+.+.+.|-+.||.++.
T Consensus 4 ~~v~vl~GG~S~E~evSl~S~~~v~~al~~~~~~v~~ 40 (364)
T 3i12_A 4 LRVGIVFGGKSAEHEVSLQSAKNIVDAIDKTRFDVVL 40 (364)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cEEEEEeccCCCCccchHHHHHHHHHHHhhcCCeEEE
Confidence 4677776666555555567888899999888998753
No 234
>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*
Probab=30.07 E-value=48 Score=27.23 Aligned_cols=54 Identities=15% Similarity=0.090 Sum_probs=32.5
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++++.-|++.+ .-+.+++.||++|..++.-+-. ---.+..+...+.|++++.+.
T Consensus 8 KvalVTGas~G-------IG~aia~~la~~Ga~Vv~~~r~-~~~~~~~~~~~~~~~~~~~~~ 61 (258)
T 4gkb_A 8 KVVIVTGGASG-------IGGAISMRLAEERAIPVVFARH-APDGAFLDALAQRQPRATYLP 61 (258)
T ss_dssp CEEEEETTTSH-------HHHHHHHHHHHTTCEEEEEESS-CCCHHHHHHHHHHCTTCEEEE
T ss_pred CEEEEeCCCCH-------HHHHHHHHHHHcCCEEEEEECC-cccHHHHHHHHhcCCCEEEEE
Confidence 44455455544 2356778888899987765533 222344455566677777764
No 235
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=30.04 E-value=2.4e+02 Score=23.49 Aligned_cols=67 Identities=13% Similarity=0.071 Sum_probs=38.6
Q ss_pred cceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 18 FKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 18 ~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
..-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 51 v~gl~v~GttGE~~~Ls~~Er~~v~~-~~~~~~~grvpviaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 122 (304)
T 3cpr_A 51 LDSLVLAGTTGESPTTTAAEKLELLK-AVREEVGDRAKLIAGVGTNNTRTSVELAEAAASAGADGLLVVTPYY 122 (304)
T ss_dssp CCEEEESSTTTTTTTSCHHHHHHHHH-HHHHHHTTTSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCEEEECccccChhhCCHHHHHHHHH-HHHHHhCCCCcEEecCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44566665544432 233333333 3333344457888888776777776 5567778887776666544
No 236
>3mwd_B ATP-citrate synthase; ATP-grAsp, phosphohistidine, organic acid, lyase, transferas; HET: CIT; 2.10A {Homo sapiens} PDB: 3mwe_B*
Probab=30.03 E-value=59 Score=28.12 Aligned_cols=18 Identities=11% Similarity=0.193 Sum_probs=14.5
Q ss_pred eEEcCCHHHHHHHhhhhc
Q 028256 180 IVSAQTAHELICKLEVFF 197 (211)
Q Consensus 180 i~~~~d~ee~~~~l~~~~ 197 (211)
+..++|++|+.+.+++.+
T Consensus 298 v~~v~~~~el~~~~~~~~ 315 (334)
T 3mwd_B 298 VFVPRSFDELGEIIQSVY 315 (334)
T ss_dssp CBCCSSGGGHHHHHHHHH
T ss_pred CeEcCCHHHHHHHHHHHH
Confidence 667999999998887654
No 237
>2bkx_A Glucosamine-6-phosphate deaminase; hydrolase, substrate inhibition, fructose-6-phosphate; HET: F6R; 1.4A {Bacillus subtilis} PDB: 2bkv_A*
Probab=30.01 E-value=2e+02 Score=22.68 Aligned_cols=80 Identities=21% Similarity=0.265 Sum_probs=40.8
Q ss_pred cCEEEEecCCcCcHHHHHHHHHHHH-h-CCCCCcEEEEeCCccc-------hhHHHHH-HHHHHcCCCCcccccceE-Ec
Q 028256 115 ADAFIALPGGYGTLEELLEVITWAQ-L-GIHDKPVGLLNVDGYY-------NSLLSFI-DKAVDEGFIAPAARYIIV-SA 183 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~~~~-l-g~~~kPiill~~~g~~-------~~l~~~l-~~~~~~g~i~~~~~~~i~-~~ 183 (211)
.+..|.++|| -|+.++++.+.-.. . ...-+.+-++..+++| +....++ +.+.+.--++......+. ..
T Consensus 28 ~~~~i~lsgG-~T~~~~~~~L~~~~~~~~~~~~~v~v~~lder~gv~~~~~~sn~~~~~~~l~~~~~~~~~~i~~p~~~~ 106 (242)
T 2bkx_A 28 PDAVLGLATG-GTPEGTYRQLIRLHQTENLSFQNITTVNLDEYAGLSSDDPNSYHFYMNDRFFQHIDSKPSRHFIPNGNA 106 (242)
T ss_dssp TTCEEEECCS-STTHHHHHHHHHHHHHSCCCCTTCEEEESEEETTCCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTC
T ss_pred CCeEEEECCC-CCHHHHHHHHHHHhhccCCChhheEEEeCccccCCCCCchHHHHHHHHHHHhccCCCCHHHEEcCCCCC
Confidence 4578888888 67888887775321 1 1222456666666666 1233333 333332113333222222 24
Q ss_pred CCHHHHHHHhhh
Q 028256 184 QTAHELICKLEV 195 (211)
Q Consensus 184 ~d~ee~~~~l~~ 195 (211)
+|+++..+..++
T Consensus 107 ~~~~~~~~~y~~ 118 (242)
T 2bkx_A 107 DDLEAECRRYEQ 118 (242)
T ss_dssp SCHHHHHHHHHH
T ss_pred CCHHHHHHHHHH
Confidence 677766555544
No 238
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=30.00 E-value=1.1e+02 Score=24.52 Aligned_cols=43 Identities=12% Similarity=0.036 Sum_probs=27.0
Q ss_pred HHHHHHHHHHcCCeEEecCC-CCChhHHHHHHHHhcCCeEEEEe
Q 028256 39 AIQLGKQLVERNIDLVYGGG-SIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg-~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
.+.+++.|+++|+.|+.... ...--+.+.+...+.|+.+..+.
T Consensus 31 G~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 74 (270)
T 3is3_A 31 GAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIK 74 (270)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEE
Confidence 46788888999999876432 22334444555555677776663
No 239
>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}
Probab=29.95 E-value=96 Score=25.89 Aligned_cols=31 Identities=29% Similarity=0.278 Sum_probs=22.0
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
..||+|++. |+=.++++-|+..|.+|+++..
T Consensus 172 ~vlV~Ga~g-giG~~~~~~a~~~Ga~V~~~~~ 202 (347)
T 2hcy_A 172 WVAISGAAG-GLGSLAVQYAKAMGYRVLGIDG 202 (347)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEEEC
T ss_pred EEEEECCCc-hHHHHHHHHHHHCCCcEEEEcC
Confidence 467888842 5545667778888889888754
No 240
>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*
Probab=29.83 E-value=1.3e+02 Score=25.32 Aligned_cols=81 Identities=16% Similarity=0.137 Sum_probs=39.4
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCC-eEEEEecCcCCCCCCC-CCCCceeeec----CCHHHHHHHHHH-hcCEEEEecC
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGR-HVLGVIPKTLMPREIT-GDTVGEVKAV----SGMHQRKAEMAR-QADAFIALPG 123 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv~P~~~~~~e~~-~~~~~~~~~~----~~~~~Rk~~m~~-~sDa~IvlpG 123 (211)
..+|+|+|..|++ +..-|+..|. +|+++-.+.. ..+.. .-..+.++.. .++.++-..+.. ..|++|-.-|
T Consensus 194 ~VlV~GaG~vG~~--aiqlak~~Ga~~Vi~~~~~~~-~~~~a~~lGa~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g 270 (373)
T 1p0f_A 194 TCAVFGLGGVGFS--AIVGCKAAGASRIIGVGTHKD-KFPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAG 270 (373)
T ss_dssp EEEEECCSHHHHH--HHHHHHHHTCSEEEEECSCGG-GHHHHHHTTCSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSC
T ss_pred EEEEECCCHHHHH--HHHHHHHcCCCeEEEECCCHH-HHHHHHHcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCC
Confidence 4668887655544 4455666787 7888743221 11111 0112223222 234433222211 3687777777
Q ss_pred CcCcHHHHHHH
Q 028256 124 GYGTLEELLEV 134 (211)
Q Consensus 124 G~GTL~El~~~ 134 (211)
+.-++++.+..
T Consensus 271 ~~~~~~~~~~~ 281 (373)
T 1p0f_A 271 RIETMMNALQS 281 (373)
T ss_dssp CHHHHHHHHHT
T ss_pred CHHHHHHHHHH
Confidence 65566555543
No 241
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=29.80 E-value=1.5e+02 Score=23.57 Aligned_cols=54 Identities=26% Similarity=0.335 Sum_probs=32.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+++-|.|+++ + ..+.+++.|+++|+.|+..+-...-.+.+.+...+.|+.+..+
T Consensus 12 k~vlVTGas~-g-------IG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 65 (264)
T 3ucx_A 12 KVVVISGVGP-A-------LGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSV 65 (264)
T ss_dssp CEEEEESCCT-T-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred cEEEEECCCc-H-------HHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4566666554 3 2467888889999998766533222333344444456666655
No 242
>2lnd_A De novo designed protein, PFK fold; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=29.79 E-value=1.2e+02 Score=21.24 Aligned_cols=51 Identities=22% Similarity=0.345 Sum_probs=33.3
Q ss_pred CCCcEEEEeCCccchhHHHHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhcc
Q 028256 143 HDKPVGLLNVDGYYNSLLSFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 143 ~~kPiill~~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
.+||++++-.+.--+++-+|-+....+|.- --+.-..||||+-+...+|..
T Consensus 50 ngkplvvfvngasqndvnefqneakkegvs-----ydvlkstdpeeltqrvreflk 100 (112)
T 2lnd_A 50 NGKPLVVFVNGASQNDVNEFQNEAKKEGVS-----YDVLKSTDPEELTQRVREFLK 100 (112)
T ss_dssp CCSCEEEEECSCCHHHHHHHHHHHHHHTCE-----EEEEECCCHHHHHHHHHHHHH
T ss_pred cCCeEEEEecCcccccHHHHHHHHHhcCcc-----hhhhccCCHHHHHHHHHHHHH
Confidence 679988773322345666665555555542 125557899999999988864
No 243
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=29.62 E-value=55 Score=25.47 Aligned_cols=32 Identities=16% Similarity=0.074 Sum_probs=16.8
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
|++|.|.|+|+ -..+.+++.|+++|+.|+.-+
T Consensus 1 Mk~vlVTGas~--------gIG~~~a~~l~~~G~~V~~~~ 32 (230)
T 3guy_A 1 MSLIVITGASS--------GLGAELAKLYDAEGKATYLTG 32 (230)
T ss_dssp --CEEEESTTS--------HHHHHHHHHHHHTTCCEEEEE
T ss_pred CCEEEEecCCc--------hHHHHHHHHHHHCCCEEEEEe
Confidence 34566665443 123456666677777765443
No 244
>3d7n_A Flavodoxin, WRBA-like protein; structural genomics, PSI, MCS protein structure initiative, midwest center for structural genomics; 2.30A {Agrobacterium tumefaciens}
Probab=29.49 E-value=17 Score=28.17 Aligned_cols=32 Identities=13% Similarity=-0.043 Sum_probs=19.1
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNI 51 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~ 51 (211)
.|++|.|+.+|..++ -.+.|+.+++.|.+.++
T Consensus 5 ~~~kiliiy~S~~Gn---T~~lA~~ia~~l~~~~~ 36 (193)
T 3d7n_A 5 SSSNTVVVYHSGYGH---THRMAEAVAEGAEATLH 36 (193)
T ss_dssp -CCCEEEEECCSSSH---HHHHHHHHHHHHTCEEE
T ss_pred CCCEEEEEEECCChH---HHHHHHHHHHHhhhcce
Confidence 456777776777653 23566777777755443
No 245
>1f0k_A MURG, UDP-N-acetylglucosamine-N-acetylmuramyl- (pentapeptide) pyrophosphoryl-undecaprenol...; rossmann fold, transferase; 1.90A {Escherichia coli} SCOP: c.87.1.2 PDB: 1nlm_A*
Probab=29.46 E-value=44 Score=27.46 Aligned_cols=32 Identities=16% Similarity=0.353 Sum_probs=23.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
++|.+++++. .-....+..|++.|+++||.+.
T Consensus 7 mkIl~~~~~~----gG~~~~~~~la~~L~~~G~~V~ 38 (364)
T 1f0k_A 7 KRLMVMAGGT----GGHVFPGLAVAHHLMAQGWQVR 38 (364)
T ss_dssp CEEEEECCSS----HHHHHHHHHHHHHHHTTTCEEE
T ss_pred cEEEEEeCCC----ccchhHHHHHHHHHHHcCCEEE
Confidence 6888885322 2345667899999999999874
No 246
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=29.38 E-value=2.3e+02 Score=23.05 Aligned_cols=59 Identities=12% Similarity=0.150 Sum_probs=41.2
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecC
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPK 83 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~ 83 (211)
+..-++++.-|++.+ .-+.+++.||++|..|+.-+-. .. +.+.+...+.|+++..+.-+
T Consensus 6 ~L~GKvalVTGas~G-------IG~aiA~~la~~Ga~Vvi~~r~-~~-~~~~~~~~~~g~~~~~~~~D 64 (247)
T 4hp8_A 6 SLEGRKALVTGANTG-------LGQAIAVGLAAAGAEVVCAARR-AP-DETLDIIAKDGGNASALLID 64 (247)
T ss_dssp CCTTCEEEETTTTSH-------HHHHHHHHHHHTTCEEEEEESS-CC-HHHHHHHHHTTCCEEEEECC
T ss_pred CCCCCEEEEeCcCCH-------HHHHHHHHHHHcCCEEEEEeCC-cH-HHHHHHHHHhCCcEEEEEcc
Confidence 344567777676664 3467888999999999876533 33 56666677889998887543
No 247
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=29.37 E-value=2.4e+02 Score=23.35 Aligned_cols=68 Identities=10% Similarity=0.018 Sum_probs=40.6
Q ss_pred CcceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 17 RFKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
...-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 34 Gv~gl~~~GttGE~~~Ls~~Er~~v~~-~~~~~~~grvpviaGvg~~~t~~ai~la~~A~~~Gadavlv~~P~y 106 (294)
T 2ehh_A 34 GTDAILVCGTTGESPTLTFEEHEKVIE-FAVKRAAGRIKVIAGTGGNATHEAVHLTAHAKEVGADGALVVVPYY 106 (294)
T ss_dssp TCCEEEESSTTTTGGGSCHHHHHHHHH-HHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCEEEECccccChhhCCHHHHHHHHH-HHHHHhCCCCcEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 344566665444332 233433333 3333344458898888876777776 5667888988777766554
No 248
>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*
Probab=29.20 E-value=1.4e+02 Score=24.32 Aligned_cols=71 Identities=14% Similarity=0.118 Sum_probs=0.0
Q ss_pred CcchHHHHHHHhhhhcCc----ceEEEEeCCC-CCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCC
Q 028256 1 METQQQQQQAAAALKSRF----KRVCVFCGSS-PGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGR 75 (211)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~----~~I~Vfggs~-~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG 75 (211)
|++--.+.+.+..+...+ ++|-|.|+++ .+ ..+.+++.|+++|+.|+..+-..-.-+.+.+-+.+.+.
T Consensus 9 ~~~~~~~~~gp~sm~~~~~l~~k~vlVTGasg~~G-------IG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~ 81 (296)
T 3k31_A 9 MGTLEAQTQGPGSMRTGMLMEGKKGVIIGVANDKS-------LAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGV 81 (296)
T ss_dssp ------------CCCCCCTTTTCEEEEECCCSTTS-------HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTC
T ss_pred cccceecccCCccccchhccCCCEEEEEeCCCCCC-------HHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCC
Q ss_pred eEE
Q 028256 76 HVL 78 (211)
Q Consensus 76 ~vi 78 (211)
...
T Consensus 82 ~~~ 84 (296)
T 3k31_A 82 KLT 84 (296)
T ss_dssp CEE
T ss_pred eEE
No 249
>1nup_A FKSG76; NAD biosynthesis, mitochondria, pyridine adenylyltransferase catalysis, transferase; HET: NMN; 1.90A {Homo sapiens} SCOP: c.26.1.3 PDB: 1nuq_A* 1nur_A 1nus_A* 1nut_A* 1nuu_A*
Probab=29.16 E-value=91 Score=25.36 Aligned_cols=37 Identities=22% Similarity=0.134 Sum_probs=28.4
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNI 51 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~ 51 (211)
.++.++|+|||||=.+..--+...+++..+.+...+.
T Consensus 2 ~~~~~~i~i~~GsFdPiH~GHl~l~~~a~~~~~~~~~ 38 (252)
T 1nup_A 2 KSRIPVVLLACGSFNPITNMHLRMFEVARDHLHQTGM 38 (252)
T ss_dssp -CCEEEEEEEEECCTTCCHHHHHHHHHHHHHHHHTTS
T ss_pred CCCCceEEEEEecCcHhhHHHHHHHHHHHHHhcccCC
Confidence 3556789999999988888888888877777766663
No 250
>3pm6_A Putative fructose-bisphosphate aldolase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.20A {Coccidioides immitis}
Probab=29.14 E-value=2.7e+02 Score=23.77 Aligned_cols=105 Identities=16% Similarity=0.055 Sum_probs=57.6
Q ss_pred EEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE-----EecCCCCCh------------hHHHHHHHHhcCCeEEEEecCcC
Q 028256 23 VFCGSSPGKSPSYQLAAIQLGKQLVERNIDL-----VYGGGSIGL------------MGLVSQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 23 Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l-----v~GGg~~Gl------------M~a~a~gA~~~gG~viGv~P~~~ 85 (211)
|+...|.-+-++-.+.++++.+.....|..| ..||+..|+ .+.+.+=+ +.|-..+.|.-..
T Consensus 117 VMiDgS~~p~eENi~~Tk~vv~~ah~~gvsVEaElG~igG~Edgv~~~~~~~~~yT~Peea~~Fv-~TgvD~LAvaiGt- 194 (306)
T 3pm6_A 117 IMVDMSHFSKEENLRLTRELVAYCNARGIATEAEPGRIEGGEDGVQDTVDLEGVLTTPEESEEFV-ATGINWLAPAFGN- 194 (306)
T ss_dssp EEECCTTSCHHHHHHHHHHHHHHHHTTTCEEEECSSBCCCCBTTBCCCTTCCCBCCCHHHHHHHH-TTTCSEECCCSSC-
T ss_pred EEEeCCCCCHHHHHHHHHHHHHHHHHcCCeEEEEeeeeccccCCccccccccccCCCHHHHHHHH-HcCCCEEEEEcCc-
Confidence 3334443344566788889999888888877 446654443 24444444 5554444431110
Q ss_pred CCCCCCCCCCceeeecCCHHHHHHHHHHhc--CEEEEecCCcCcHHHHHHHH
Q 028256 86 MPREITGDTVGEVKAVSGMHQRKAEMARQA--DAFIALPGGYGTLEELLEVI 135 (211)
Q Consensus 86 ~~~e~~~~~~~~~~~~~~~~~Rk~~m~~~s--Da~IvlpGG~GTL~El~~~~ 135 (211)
.+....+ ... .-+ ++|...+-+.. +.-+||-||+|+-+|-+...
T Consensus 195 -~HG~Yk~--~~p--~Ld-~~~L~~I~~~v~~~vpLVlHGgSG~p~e~i~~a 240 (306)
T 3pm6_A 195 -VHGNYGP--RGV--QLD-YERLQRINEAVGERVGLVLHGADPFTKEIFEKC 240 (306)
T ss_dssp -CSSCCCT--TCC--CCC-HHHHHHHHHHHTTTSEEEECSCTTCCHHHHHHH
T ss_pred -cccCcCC--CCC--ccC-HHHHHHHHHHhCCCCCEEeeCCCCCCHHHHHHH
Confidence 0110000 000 011 45555555543 78999999999988866543
No 251
>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}
Probab=29.14 E-value=42 Score=30.07 Aligned_cols=29 Identities=31% Similarity=0.174 Sum_probs=24.5
Q ss_pred CeEEecCCCCChhHHHHHHHHh-cCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYD-GGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~-~gG~viGv 80 (211)
..|||||+. |+=.|+++...+ .|..|+++
T Consensus 63 vaLVTGASs-GIG~AiA~~LA~~~GA~Vv~~ 92 (422)
T 3s8m_A 63 KVLVIGASS-GYGLASRITAAFGFGADTLGV 92 (422)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEEECCCh-HHHHHHHHHHHHhCCCEEEEE
Confidence 368999986 999999998888 89888877
No 252
>2an1_A Putative kinase; structural genomics, PSI, protein structure initiative, midwest center for structural genomics, MCSG, transferase; 2.00A {Salmonella typhimurium}
Probab=29.10 E-value=94 Score=25.50 Aligned_cols=36 Identities=25% Similarity=0.247 Sum_probs=23.9
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
+.+.+|.+|+ -||=||+.|+...+. ..+.|++-+|.
T Consensus 60 ~~~~~D~vi~-~GGDGT~l~a~~~~~-----~~~~P~lGI~~ 95 (292)
T 2an1_A 60 IGQQADLAVV-VGGDGNMLGAARTLA-----RYDINVIGINR 95 (292)
T ss_dssp HHHHCSEEEE-CSCHHHHHHHHHHHT-----TSSCEEEEBCS
T ss_pred cccCCCEEEE-EcCcHHHHHHHHHhh-----cCCCCEEEEEC
Confidence 3456785554 688999999986653 13577665553
No 253
>3e5n_A D-alanine-D-alanine ligase A; bacterial blight; 2.00A {Xanthomonas oryzae PV} PDB: 3r5f_A* 3rfc_A*
Probab=28.99 E-value=31 Score=30.05 Aligned_cols=38 Identities=16% Similarity=0.114 Sum_probs=27.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
+++|+|++|......+.-...|+.+.+.|-+.||.++.
T Consensus 22 ~~~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 59 (386)
T 3e5n_A 22 KIRVGLIFGGKSAEHEVSLQSARNILDALDPQRFEPVL 59 (386)
T ss_dssp CEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred CceEEEEeccCCCCchhHHHHHHHHHHHhCccCCEEEE
Confidence 34677777666555555567888899998888998753
No 254
>3ea0_A ATPase, para family; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: ATP; 2.20A {Chlorobium tepidum}
Probab=28.96 E-value=61 Score=25.19 Aligned_cols=36 Identities=14% Similarity=0.170 Sum_probs=25.1
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-CCeEE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVER-NIDLV 54 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~-g~~lv 54 (211)
++++.|+|++ ...+.... ..|..|+..||++ |..++
T Consensus 2 ~~~~vI~v~s-~kGGvGKT--t~a~~LA~~la~~~g~~Vl 38 (245)
T 3ea0_A 2 NAKRVFGFVS-AKGGDGGS--CIAANFAFALSQEPDIHVL 38 (245)
T ss_dssp -CCEEEEEEE-SSTTSSHH--HHHHHHHHHHTTSTTCCEE
T ss_pred CCCeEEEEEC-CCCCcchH--HHHHHHHHHHHhCcCCCEE
Confidence 4567788874 44454543 4688999999998 88764
No 255
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=28.94 E-value=84 Score=21.78 Aligned_cols=32 Identities=16% Similarity=0.245 Sum_probs=22.6
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++-+.|.|||.+.. ++...++.|.+.||..++
T Consensus 54 ~~~~~ivv~C~~G~--------rS~~aa~~L~~~G~~~~~ 85 (103)
T 3iwh_A 54 NKNEIYYIVCAGGV--------RSAKVVEYLEANGIDAVN 85 (103)
T ss_dssp CTTSEEEEECSSSS--------HHHHHHHHHHTTTCEEEE
T ss_pred cCCCeEEEECCCCH--------HHHHHHHHHHHcCCCEEE
Confidence 34567899996542 244567788899999875
No 256
>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}
Probab=28.90 E-value=1.4e+02 Score=23.89 Aligned_cols=69 Identities=14% Similarity=0.199 Sum_probs=0.0
Q ss_pred HHHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec-CCCCChhHHHHHHHHhcCCeEEEE
Q 028256 5 QQQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG-GGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 5 ~~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G-Gg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..+.+.-+.......+++++-|++.+ ..+.+++.|+++|+.++.- ......-+.+.+.....|+.+..+
T Consensus 13 ~~~~~~~~~~m~~~~k~~lVTGas~G-------IG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (267)
T 3u5t_A 13 LGTENLYFQSMMETNKVAIVTGASRG-------IGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTA 82 (267)
T ss_dssp --------------CCEEEEESCSSH-------HHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccccccCCCEEEEeCCCCH-------HHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEE
No 257
>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}
Probab=28.90 E-value=48 Score=25.80 Aligned_cols=30 Identities=17% Similarity=0.161 Sum_probs=25.4
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
..|||||+. |+=.++++...+.|..|+.+-
T Consensus 3 ~vlVTGas~-gIG~~~a~~l~~~G~~V~~~~ 32 (230)
T 3guy_A 3 LIVITGASS-GLGAELAKLYDAEGKATYLTG 32 (230)
T ss_dssp CEEEESTTS-HHHHHHHHHHHHTTCCEEEEE
T ss_pred EEEEecCCc-hHHHHHHHHHHHCCCEEEEEe
Confidence 468999975 999999999999998888773
No 258
>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0
Probab=28.88 E-value=50 Score=26.05 Aligned_cols=19 Identities=32% Similarity=0.286 Sum_probs=12.5
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 16 G~a~a~~l~~~G~~V~~~~ 34 (235)
T 3l6e_A 16 GRALTIGLVERGHQVSMMG 34 (235)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEE
Confidence 3566777777777766544
No 259
>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*
Probab=28.72 E-value=42 Score=27.55 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=16.4
Q ss_pred eEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.|||||+. |+=.|.++...+.|.+|+..
T Consensus 14 alVTGas~-GIG~aia~~la~~Ga~V~~~ 41 (261)
T 4h15_A 14 ALITAGTK-GAGAATVSLFLELGAQVLTT 41 (261)
T ss_dssp EEESCCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeccCc-HHHHHHHHHHHHcCCEEEEE
Confidence 45666654 66666666666666665544
No 260
>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*
Probab=28.70 E-value=1.5e+02 Score=23.32 Aligned_cols=54 Identities=11% Similarity=0.083 Sum_probs=0.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+++.|.|+|+ -..+.+++.|+++|+.|+..+-...-.+.+.+...+.|+.+..+
T Consensus 8 k~~lVTGas~--------gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 61 (247)
T 2jah_A 8 KVALITGASS--------GIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVL 61 (247)
T ss_dssp CEEEEESCSS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEE
No 261
>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=28.65 E-value=1.9e+02 Score=21.97 Aligned_cols=28 Identities=21% Similarity=0.304 Sum_probs=16.6
Q ss_pred eEEecCCCCChhHHHHHHHHhcC--CeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGG--RHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~g--G~viGv 80 (211)
.|||||+. |+=.++++...+.| -.|+.+
T Consensus 6 vlItGasg-giG~~la~~l~~~g~~~~V~~~ 35 (250)
T 1yo6_A 6 VVVTGANR-GIGLGLVQQLVKDKNIRHIIAT 35 (250)
T ss_dssp EEESSCSS-HHHHHHHHHHHTCTTCCEEEEE
T ss_pred EEEecCCc-hHHHHHHHHHHhcCCCcEEEEE
Confidence 45666653 66666666666666 555554
No 262
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=28.56 E-value=2.1e+02 Score=22.40 Aligned_cols=19 Identities=21% Similarity=0.303 Sum_probs=12.4
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 22 G~~ia~~l~~~G~~V~~~~ 40 (266)
T 3oig_A 22 AWGIARSLHEAGARLIFTY 40 (266)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEec
Confidence 3466777777777776554
No 263
>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}
Probab=28.52 E-value=2.3e+02 Score=22.86 Aligned_cols=104 Identities=12% Similarity=0.075 Sum_probs=0.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCC--CChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCc
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGS--IGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVG 96 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~--~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~ 96 (211)
+++-|-|+++ -..+.+++.|+++|+.|+.-+-. ..--+.+.+...+.|+.+..+ .-.++
T Consensus 50 k~vlVTGas~--------GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----------~~Dv~ 110 (294)
T 3r3s_A 50 RKALVTGGDS--------GIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLL-----------PGDLS 110 (294)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEEC-----------CCCTT
T ss_pred CEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEE-----------EecCC
Q ss_pred eeeecCCHHHHHHHHHHhcCEEEEecCCcC--------cHHHHHHHHHHHHhC
Q 028256 97 EVKAVSGMHQRKAEMARQADAFIALPGGYG--------TLEELLEVITWAQLG 141 (211)
Q Consensus 97 ~~~~~~~~~~Rk~~m~~~sDa~IvlpGG~G--------TL~El~~~~~~~~lg 141 (211)
+.--...+.++-..-...-|++|-..|..+ |.+++-..+..+-.+
T Consensus 111 d~~~v~~~~~~~~~~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g 163 (294)
T 3r3s_A 111 DESFARSLVHKAREALGGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFA 163 (294)
T ss_dssp SHHHHHHHHHHHHHHHTCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHH
T ss_pred CHHHHHHHHHHHHHHcCCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHH
No 264
>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}
Probab=28.35 E-value=51 Score=26.30 Aligned_cols=30 Identities=17% Similarity=0.143 Sum_probs=25.5
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 37 (252)
T 3h7a_A 8 ATVAVIGAGD-YIGAEIAKKFAAEGFTVFAG 37 (252)
T ss_dssp CEEEEECCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999975 99999999999999888876
No 265
>1req_A Methylmalonyl-COA mutase; isomerase, intramolecular transferase; HET: B12 DCA; 2.00A {Propionibacterium freudenreichii subspshermanii} SCOP: c.1.19.1 c.23.6.1 PDB: 2req_A* 3req_A* 4req_A* 6req_A* 7req_A* 5req_A* 1e1c_A*
Probab=28.31 E-value=1.3e+02 Score=29.00 Aligned_cols=43 Identities=14% Similarity=0.126 Sum_probs=35.2
Q ss_pred HHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 38 AAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 38 ~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
-+.-++..|+..||.++++|.. =-.+.+.+.|.+.+..+||+.
T Consensus 612 G~~iVa~~l~~~GfeVi~lG~~-v~~eeiv~aA~e~~adiVglS 654 (727)
T 1req_A 612 GQKVIATAYADLGFDVDVGPLF-QTPEETARQAVEADVHVVGVS 654 (727)
T ss_dssp HHHHHHHHHHHHTCEEEECCTT-BCHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHhCCeEEEeCCCC-CCHHHHHHHHHHcCCCEEEEe
Confidence 3455677888899999998865 346888899999999999993
No 266
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=28.18 E-value=2.3e+02 Score=23.35 Aligned_cols=68 Identities=12% Similarity=0.049 Sum_probs=40.1
Q ss_pred CcceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 17 RFKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
...-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 34 Gv~gl~~~GttGE~~~Ls~~Er~~v~~-~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 106 (289)
T 2yxg_A 34 GVSGIVAVGTTGESPTLSHEEHKKVIE-KVVDVVNGRVQVIAGAGSNCTEEAIELSVFAEDVGADAVLSITPYY 106 (289)
T ss_dssp TCSEEEESSTTTTGGGSCHHHHHHHHH-HHHHHHTTSSEEEEECCCSSHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CCCEEEECccccChhhCCHHHHHHHHH-HHHHHhCCCCcEEEeCCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 344566665444332 233433333 3333344458888888876777776 5667788888777766554
No 267
>2hpv_A FMN-dependent NADH-azoreductase; structural genomics, PS protein structure initiative, southeast collaboratory for S genomics, secsg; HET: FMN; 2.00A {Enterococcus faecalis}
Probab=28.12 E-value=98 Score=23.66 Aligned_cols=33 Identities=12% Similarity=0.001 Sum_probs=17.1
Q ss_pred cceEEEEeCCCC-CCCHHHHHHHHHHHHHHHHcC
Q 028256 18 FKRVCVFCGSSP-GKSPSYQLAAIQLGKQLVERN 50 (211)
Q Consensus 18 ~~~I~Vfggs~~-~~~~~~~~~A~~lG~~la~~g 50 (211)
|++|.|+.||.. +.++.-...|+.+.+.+.++|
T Consensus 1 M~kilii~gS~r~~~~s~t~~la~~~~~~~~~~g 34 (208)
T 2hpv_A 1 MSKLLVVKAHPLTKEESRSVRALETFLASYRETN 34 (208)
T ss_dssp -CEEEEEECCSSCTTTCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEecCCCCCCCHHHHHHHHHHHHHHHhC
Confidence 345555556555 223333456666666666554
No 268
>3l6u_A ABC-type sugar transport system periplasmic compo; structural genomics, nysgrc, target 11006S, PSI-2, protein S initiative; 1.90A {Exiguobacterium sibiricum}
Probab=28.08 E-value=2.2e+02 Score=22.29 Aligned_cols=38 Identities=8% Similarity=-0.089 Sum_probs=22.4
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
.+.++|+|+..+. .++-+.+....+-+.+.+.|+.++.
T Consensus 6 ~~~~~Ig~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 43 (293)
T 3l6u_A 6 PKRNIVGFTIVND--KHEFAQRLINAFKAEAKANKYEALV 43 (293)
T ss_dssp ---CEEEEEESCS--CSHHHHHHHHHHHHHHHHTTCEEEE
T ss_pred CCCcEEEEEEecC--CcHHHHHHHHHHHHHHHHcCCEEEE
Confidence 3456899987543 3566666666666666666666543
No 269
>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}
Probab=28.07 E-value=1.2e+02 Score=28.02 Aligned_cols=67 Identities=16% Similarity=0.197 Sum_probs=33.4
Q ss_pred HHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCC---------CCChhHHHHHHHHhcCCe
Q 028256 6 QQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGG---------SIGLMGLVSQAVYDGGRH 76 (211)
Q Consensus 6 ~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg---------~~GlM~a~a~gA~~~gG~ 76 (211)
++..++....+-..+++++-|++.+ ..+++++.|+++|+.|+.-+- ...-.+.+.+...+.++.
T Consensus 6 ~~~~~~~~~~~l~gk~~lVTGas~G-------IG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~ 78 (613)
T 3oml_A 6 HHMSSSDGKLRYDGRVAVVTGAGAG-------LGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGE 78 (613)
T ss_dssp ---------CCCTTCEEEETTTTSH-------HHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCC
T ss_pred ccccCcccccCCCCCEEEEeCCCcH-------HHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCe
Confidence 3444444444444556666566543 356788899999999986431 112233444444556666
Q ss_pred EEE
Q 028256 77 VLG 79 (211)
Q Consensus 77 viG 79 (211)
+++
T Consensus 79 ~~~ 81 (613)
T 3oml_A 79 AVA 81 (613)
T ss_dssp EEE
T ss_pred EEE
Confidence 654
No 270
>3bbo_Q Ribosomal protein L18; large ribosomal subunit, spinach chloroplast ribosome, ribonucleoprotein particle, macromolecular complex; 9.40A {Spinacea oleracea}
Probab=27.80 E-value=29 Score=27.20 Aligned_cols=39 Identities=23% Similarity=0.390 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHH----cCCeEE-e--cC-CCCChhHHHHHHHHhcCC
Q 028256 37 LAAIQLGKQLVE----RNIDLV-Y--GG-GSIGLMGLVSQAVYDGGR 75 (211)
Q Consensus 37 ~~A~~lG~~la~----~g~~lv-~--GG-g~~GlM~a~a~gA~~~gG 75 (211)
+.|+.+|+.||+ .|+.=| + || -+-|-..|++++|.++|-
T Consensus 113 ~AA~~VG~liAeRA~e~GI~~VvFDRgg~~YhGRVkAladaaRe~GL 159 (161)
T 3bbo_Q 113 EVAKKVGEVIASACLEKGITKVAFDRGGYPYHGRVKALADAAREKGL 159 (161)
T ss_dssp HHHHHHHHHSSSHHHHTSSCCCCCCCSSSCSSSTTHHHHHHHTTTTC
T ss_pred HHHHHHHHHHHHHHHHCCCCEEEEeCCCCcchHHHHHHHHHHHHhCC
Confidence 568888988886 455332 1 33 246889999999999873
No 271
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=27.74 E-value=1e+02 Score=21.52 Aligned_cols=27 Identities=7% Similarity=0.385 Sum_probs=18.4
Q ss_pred ceEEEEeC-CCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 19 KRVCVFCG-SSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 19 ~~I~Vfgg-s~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
+.|.|||. +. ..|...+..|.+.||.+
T Consensus 90 ~~ivvyC~~~G--------~rs~~a~~~L~~~G~~v 117 (134)
T 3g5j_A 90 DNIVIYCARGG--------MRSGSIVNLLSSLGVNV 117 (134)
T ss_dssp SEEEEECSSSS--------HHHHHHHHHHHHTTCCC
T ss_pred CeEEEEECCCC--------hHHHHHHHHHHHcCCce
Confidence 68999984 33 23456777788888854
No 272
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=27.70 E-value=56 Score=26.39 Aligned_cols=32 Identities=28% Similarity=0.205 Sum_probs=20.5
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
+-++|-|-|+|+ + ..+++++.|+++|+.|+.-
T Consensus 13 ~~k~vlVTGas~-G-------IG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 13 TDKVAIVTGGSS-G-------IGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp TTCEEEESSTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEE
Confidence 345566665543 2 3456788888889987643
No 273
>2qv7_A Diacylglycerol kinase DGKB; alpha-beta domain 1, beta sandwich domain 2, protein-ADP COM transferase; HET: ADP; 2.30A {Staphylococcus aureus} SCOP: e.52.1.2 PDB: 2qvl_A
Probab=27.69 E-value=30 Score=29.37 Aligned_cols=34 Identities=26% Similarity=0.480 Sum_probs=23.5
Q ss_pred cCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 115 ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.|. |+.-||=||+.|+...+. + ...+.|+.+++.
T Consensus 81 ~d~-vvv~GGDGTv~~v~~~l~--~-~~~~~pl~iIP~ 114 (337)
T 2qv7_A 81 YDV-LIAAGGDGTLNEVVNGIA--E-KPNRPKLGVIPM 114 (337)
T ss_dssp CSE-EEEEECHHHHHHHHHHHT--T-CSSCCEEEEEEC
T ss_pred CCE-EEEEcCchHHHHHHHHHH--h-CCCCCcEEEecC
Confidence 454 555689999999987762 1 124678888865
No 274
>3k9g_A PF-32 protein; ssgcid, SBRI, decode biostructures, UW, NIH, niaid, borellia burgdorferi, plasmid partition protein, iodide; 2.25A {Borrelia burgdorferi} PDB: 3k9h_A
Probab=27.68 E-value=76 Score=25.25 Aligned_cols=34 Identities=24% Similarity=0.232 Sum_probs=22.9
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
++++.|+|+ |...+.... ..|..|+..|| +|..+
T Consensus 25 ~~~~vI~v~-s~kGGvGKT--T~a~~LA~~la-~g~~V 58 (267)
T 3k9g_A 25 KKPKIITIA-SIKGGVGKS--TSAIILATLLS-KNNKV 58 (267)
T ss_dssp -CCEEEEEC-CSSSSSCHH--HHHHHHHHHHT-TTSCE
T ss_pred CCCeEEEEE-eCCCCchHH--HHHHHHHHHHH-CCCCE
Confidence 345556666 555555543 56889999999 88876
No 275
>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2
Probab=27.50 E-value=1.3e+02 Score=23.91 Aligned_cols=71 Identities=15% Similarity=0.164 Sum_probs=0.0
Q ss_pred cchHHHHHHHhhhhcCc--ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcC--CeE
Q 028256 2 ETQQQQQQAAAALKSRF--KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGG--RHV 77 (211)
Q Consensus 2 ~~~~~~~~~~~~~~~~~--~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~g--G~v 77 (211)
||++-|-+...+....+ ++|.|.|+++ -..+.+++.|+++|+.|+.-+-...-.+.+.+...+.| +.+
T Consensus 14 ~~~~~~~~~~~~~m~~l~~k~vlVTGasg--------gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~ 85 (279)
T 1xg5_A 14 ENLYFQGHMARPGMERWRDRLALVTGASG--------GIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTL 85 (279)
T ss_dssp ---------CCTTCGGGTTCEEEEESTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEE
T ss_pred cceeeecccccccccccCCCEEEEECCCc--------hHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceE
Q ss_pred EEE
Q 028256 78 LGV 80 (211)
Q Consensus 78 iGv 80 (211)
..+
T Consensus 86 ~~~ 88 (279)
T 1xg5_A 86 IPY 88 (279)
T ss_dssp EEE
T ss_pred EEE
No 276
>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}
Probab=27.49 E-value=47 Score=27.36 Aligned_cols=29 Identities=24% Similarity=0.343 Sum_probs=25.4
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.+.++.-.+.|.+|+..
T Consensus 11 valVTGas~-GIG~aiA~~la~~Ga~Vvi~ 39 (247)
T 4hp8_A 11 KALVTGANT-GLGQAIAVGLAAAGAEVVCA 39 (247)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCcCC-HHHHHHHHHHHHcCCEEEEE
Confidence 468999986 99999999999999998765
No 277
>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0
Probab=27.46 E-value=53 Score=26.45 Aligned_cols=30 Identities=7% Similarity=0.124 Sum_probs=20.2
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
+++-|-|+++ + ..+++++.|+++|+.|+.-
T Consensus 12 k~~lVTGas~-G-------IG~a~a~~la~~G~~V~~~ 41 (277)
T 3tsc_A 12 RVAFITGAAR-G-------QGRAHAVRMAAEGADIIAV 41 (277)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc-H-------HHHHHHHHHHHcCCEEEEE
Confidence 4566665543 2 3467888888999998754
No 278
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=27.45 E-value=2.4e+02 Score=22.61 Aligned_cols=42 Identities=14% Similarity=0.177 Sum_probs=22.1
Q ss_pred HHHHHHHHHHcCCeEEecCC-CCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGG-SIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg-~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+++++.|+++|+.|+.-+. ...-.+.+.+...+.|+.+..+
T Consensus 42 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T 4da9_A 42 GLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFL 84 (280)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 45677777778887755432 2122333333344445555554
No 279
>2ij9_A Uridylate kinase; structural genomics, protein structure initiative, P nysgxrc; 2.90A {Archaeoglobus fulgidus} SCOP: c.73.1.3
Probab=27.35 E-value=48 Score=26.14 Aligned_cols=49 Identities=18% Similarity=0.280 Sum_probs=28.0
Q ss_pred HHHHHHHHhcCEEEEecCC--cCcHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 106 QRKAEMARQADAFIALPGG--YGTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 106 ~Rk~~m~~~sDa~IvlpGG--~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
+|-..+++.....| ++|| +++-|.+...++ ..++. .+-+++-+++|.|+
T Consensus 93 ~~i~~ll~~g~ipV-i~~g~~~~~~D~~Aa~lA-~~l~A-d~li~lTdVdGv~~ 143 (219)
T 2ij9_A 93 MEAEELSKLYRVVV-MGGTFPGHTTDATAALLA-EFIKA-DVFINATNVDGVYS 143 (219)
T ss_dssp HHHHHHHTTCSEEE-ECCCSSSSCTHHHHHHHH-HHTTC-SEEEEEESSSSCBC
T ss_pred HHHHHHHHCCCEEE-EeCCCCCCCchHHHHHHH-HHcCC-CeEEEeeCCCceec
Confidence 34444555444444 4444 567788776665 33432 34555668889885
No 280
>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}
Probab=27.34 E-value=55 Score=26.00 Aligned_cols=28 Identities=21% Similarity=0.259 Sum_probs=11.8
Q ss_pred eEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.|||||+. |+=.++++...+.|.+|+.+
T Consensus 25 vlITGas~-gIG~~la~~l~~~G~~V~~~ 52 (251)
T 3orf_A 25 ILVLGGSG-ALGAEVVKFFKSKSWNTISI 52 (251)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 34444432 44444444444444444333
No 281
>3ksm_A ABC-type sugar transport system, periplasmic COMP; periplasmic component, PSI- 11023L, structural genomics, protein structure initiative; HET: BDR; 1.90A {Hahella chejuensis}
Probab=27.33 E-value=1.1e+02 Score=23.74 Aligned_cols=37 Identities=19% Similarity=0.279 Sum_probs=23.8
Q ss_pred HHHh-cCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 111 MARQ-ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 111 m~~~-sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
+-.. .|++|+.|-......+....+.. .+.|+++++.
T Consensus 55 ~~~~~vdgii~~~~~~~~~~~~~~~~~~-----~~ipvV~~~~ 92 (276)
T 3ksm_A 55 LSQAPPDALILAPNSAEDLTPSVAQYRA-----RNIPVLVVDS 92 (276)
T ss_dssp HHHSCCSEEEECCSSTTTTHHHHHHHHH-----TTCCEEEESS
T ss_pred HHhCCCCEEEEeCCCHHHHHHHHHHHHH-----CCCcEEEEec
Confidence 3445 79999988655455555544431 4678888864
No 282
>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}
Probab=27.30 E-value=75 Score=24.57 Aligned_cols=41 Identities=20% Similarity=0.099 Sum_probs=0.0
Q ss_pred HHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 6 QQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 6 ~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
++-..+....-+.++|.|.|+++ -....+.+.|+++|+.|+
T Consensus 9 ~~~~~~~~~~l~~~~ilVtGatG--------~iG~~l~~~L~~~G~~V~ 49 (236)
T 3e8x_A 9 HHSSGRENLYFQGMRVLVVGANG--------KVARYLLSELKNKGHEPV 49 (236)
T ss_dssp ------------CCEEEEETTTS--------HHHHHHHHHHHHTTCEEE
T ss_pred cccccccccCcCCCeEEEECCCC--------hHHHHHHHHHHhCCCeEE
No 283
>3dii_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3dij_A* 3ged_A 3geg_A*
Probab=27.24 E-value=55 Score=25.90 Aligned_cols=11 Identities=9% Similarity=0.142 Sum_probs=6.2
Q ss_pred hcCEEEEecCC
Q 028256 114 QADAFIALPGG 124 (211)
Q Consensus 114 ~sDa~IvlpGG 124 (211)
.-|++|-..|-
T Consensus 75 ~id~lv~nAg~ 85 (247)
T 3dii_A 75 RIDVLVNNACR 85 (247)
T ss_dssp CCCEEEECCC-
T ss_pred CCCEEEECCCC
Confidence 35766666654
No 284
>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}
Probab=27.24 E-value=73 Score=24.66 Aligned_cols=29 Identities=10% Similarity=0.114 Sum_probs=0.0
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
|++|.|.|+++ -...++.+.|+++|+.|+
T Consensus 1 Mk~vlVtGasg--------~iG~~l~~~L~~~g~~V~ 29 (255)
T 2dkn_A 1 MSVIAITGSAS--------GIGAALKELLARAGHTVI 29 (255)
T ss_dssp -CEEEEETTTS--------HHHHHHHHHHHHTTCEEE
T ss_pred CcEEEEeCCCc--------HHHHHHHHHHHhCCCEEE
No 285
>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*
Probab=27.18 E-value=1.3e+02 Score=24.48 Aligned_cols=72 Identities=14% Similarity=0.111 Sum_probs=0.0
Q ss_pred CcchHHHHHHHhhhhcCc-----ceEEEEeCCC-CCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcC
Q 028256 1 METQQQQQQAAAALKSRF-----KRVCVFCGSS-PGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGG 74 (211)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~-----~~I~Vfggs~-~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~g 74 (211)
|..+.++.+-+..+...+ ++|-|-|+++ .+ ..+.+++.|+++|+.|+..+-. ---....+...+.+
T Consensus 9 ~~~~~~~~~gp~~~~~~~~~l~gk~~lVTGasg~~G-------IG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~ 80 (293)
T 3grk_A 9 MGTLEAQTQGPGSMTAQSGLLQGKRGLILGVANNRS-------IAWGIAKAAREAGAELAFTYQG-DALKKRVEPLAEEL 80 (293)
T ss_dssp ------------------CTTTTCEEEEECCCSSSS-------HHHHHHHHHHHTTCEEEEEECS-HHHHHHHHHHHHHH
T ss_pred cCCcCccccCCCCCCcccccCCCCEEEEEcCCCCCc-------HHHHHHHHHHHCCCEEEEEcCC-HHHHHHHHHHHHhc
Q ss_pred CeEEEE
Q 028256 75 RHVLGV 80 (211)
Q Consensus 75 G~viGv 80 (211)
+.+..+
T Consensus 81 ~~~~~~ 86 (293)
T 3grk_A 81 GAFVAG 86 (293)
T ss_dssp TCEEEE
T ss_pred CCceEE
No 286
>3qy9_A DHPR, dihydrodipicolinate reductase; rossmann fold, NADH, NADPH, oxidoreductase; 1.80A {Staphylococcus aureus}
Probab=27.05 E-value=57 Score=26.71 Aligned_cols=28 Identities=11% Similarity=0.176 Sum_probs=13.7
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
|++|+|.|. + +..+.+.+.+.+++..|+
T Consensus 3 MmkI~ViGa---G------rMG~~i~~~l~~~~~eLv 30 (243)
T 3qy9_A 3 SMKILLIGY---G------AMNQRVARLAEEKGHEIV 30 (243)
T ss_dssp CCEEEEECC---S------HHHHHHHHHHHHTTCEEE
T ss_pred ceEEEEECc---C------HHHHHHHHHHHhCCCEEE
Confidence 456666642 2 233445555555544444
No 287
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=27.01 E-value=1.3e+02 Score=24.23 Aligned_cols=69 Identities=14% Similarity=0.077 Sum_probs=40.9
Q ss_pred HHHHHHhcCEEEEec------------CCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHH-HHcCCCCc
Q 028256 108 KAEMARQADAFIALP------------GGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKA-VDEGFIAP 174 (211)
Q Consensus 108 k~~m~~~sDa~Ivlp------------GG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~-~~~g~i~~ 174 (211)
...++..||++|.-. .|+|. =+.|+++ .++||+..+..|. .+++ ++. -..|++
T Consensus 225 l~~~~~~adv~v~ps~~~~~~~~~~~~E~~~~--~~~EAma------~G~PvI~s~~~~~-~e~~---~~~~~~~g~~-- 290 (342)
T 2iuy_A 225 RLDLLASAHAVLAMSQAVTGPWGGIWCEPGAT--VVSEAAV------SGTPVVGTGNGCL-AEIV---PSVGEVVGYG-- 290 (342)
T ss_dssp HHHHHHHCSEEEECCCCCCCTTCSCCCCCCCH--HHHHHHH------TTCCEEECCTTTH-HHHG---GGGEEECCSS--
T ss_pred HHHHHHhCCEEEECCcccccccccccccCccH--HHHHHHh------cCCCEEEcCCCCh-HHHh---cccCCCceEE--
Confidence 356678999987642 34454 4677777 7999999876542 2211 100 011222
Q ss_pred ccccceEEcCCHHHHHHHhhhhc
Q 028256 175 AARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 175 ~~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
.-. |++++.+.|.+..
T Consensus 291 ------~~~-d~~~l~~~i~~l~ 306 (342)
T 2iuy_A 291 ------TDF-APDEARRTLAGLP 306 (342)
T ss_dssp ------SCC-CHHHHHHHHHTSC
T ss_pred ------cCC-CHHHHHHHHHHHH
Confidence 212 8888888887654
No 288
>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*
Probab=27.01 E-value=56 Score=25.92 Aligned_cols=51 Identities=12% Similarity=0.113 Sum_probs=28.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+++-|.|+|+ + ..+.+++.|+++|+.|+.-+-. -+...+.+.+.++.+..+
T Consensus 7 k~vlVTGas~-g-------IG~a~a~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 57 (247)
T 3rwb_A 7 KTALVTGAAQ-G-------IGKAIAARLAADGATVIVSDIN---AEGAKAAAASIGKKARAI 57 (247)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEECSC---HHHHHHHHHHHCTTEEEC
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEE
Confidence 4566665543 2 3457888888889988765432 122222233335555544
No 289
>2yxb_A Coenzyme B12-dependent mutase; alpha/beta, structural genomics, NPPSFA, national project on structural and functional analyses; 1.80A {Aeropyrum pernix}
Probab=26.83 E-value=1.3e+02 Score=22.64 Aligned_cols=59 Identities=22% Similarity=0.170 Sum_probs=40.6
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
.++|-+.+-.... ++.- +.-++..|..+||.+++-|.. =-.+.+.+.|.+.+-.+||+.
T Consensus 18 ~~~vlla~~~gd~-HdiG---~~~va~~l~~~G~eVi~lG~~-~p~e~lv~aa~~~~~diV~lS 76 (161)
T 2yxb_A 18 RYKVLVAKMGLDG-HDRG---AKVVARALRDAGFEVVYTGLR-QTPEQVAMAAVQEDVDVIGVS 76 (161)
T ss_dssp SCEEEEEEESSSS-CCHH---HHHHHHHHHHTTCEEECCCSB-CCHHHHHHHHHHTTCSEEEEE
T ss_pred CCEEEEEeCCCCc-cHHH---HHHHHHHHHHCCCEEEECCCC-CCHHHHHHHHHhcCCCEEEEE
Confidence 4455555433332 3322 345667788899999998865 346778899999999999984
No 290
>3ou5_A Serine hydroxymethyltransferase, mitochondrial; structural genomics, STRU genomics consortium, SGC; 2.04A {Homo sapiens}
Probab=26.72 E-value=29 Score=31.87 Aligned_cols=40 Identities=30% Similarity=0.349 Sum_probs=29.3
Q ss_pred HHHHHHHHHHcCCeEEecCCC----------CChhHHHHHHHHhcCCeEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGS----------IGLMGLVSQAVYDGGRHVL 78 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~----------~GlM~a~a~gA~~~gG~vi 78 (211)
|+.|++.|.++|+.||+||-. .|+-+..++.+++.-|.++
T Consensus 344 AkaLA~~L~~~G~~vvsGgTdnHlvLvDl~~~g~tG~~ae~~Le~agItv 393 (490)
T 3ou5_A 344 ARAMADALLERGYSLVSGGTDNHLVLVDLRPKGLDGARAERVLELVSITA 393 (490)
T ss_dssp HHHHHHHHHHTTCEEGGGSCSSSEEEEECGGGTCCHHHHHHHHHHTTEEC
T ss_pred HHHHHHHHHhCCCeeecCCCCceEEEEeccccCCCHHHHHHHHHHcCcEE
Confidence 567788888899999998743 3666777777777655444
No 291
>1t5b_A Acyl carrier protein phosphodiesterase; structural genomics, FMN, alpha/beta/alpha sandwich, PSI, protein structure initiative; HET: FMN; 1.40A {Salmonella typhimurium} SCOP: c.23.5.3 PDB: 1tik_A 2z98_A* 2d5i_A* 1v4b_A* 2z9b_A* 2z9c_A* 2z9d_A*
Probab=26.71 E-value=81 Score=23.74 Aligned_cols=33 Identities=15% Similarity=0.014 Sum_probs=17.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERN 50 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g 50 (211)
|++|.|+.||....++.-.+.|+.+.+.+.++|
T Consensus 1 Mmkilii~~S~~~~~s~t~~la~~~~~~l~~~g 33 (201)
T 1t5b_A 1 MSKVLVLKSSILAGYSQSGQLTDYFIEQWREKH 33 (201)
T ss_dssp CCEEEEEECCSSGGGCHHHHHHHHHHHHHHHHC
T ss_pred CCeEEEEEeCCCCCCChHHHHHHHHHHHHHHhC
Confidence 345656556654312223355666666666554
No 292
>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1
Probab=26.69 E-value=1.2e+02 Score=25.81 Aligned_cols=31 Identities=26% Similarity=0.230 Sum_probs=20.1
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
...||+|+|+.|++ +..-|+..|.+|+++..
T Consensus 196 ~~VlV~GaG~vG~~--aiqlak~~Ga~Vi~~~~ 226 (369)
T 1uuf_A 196 KKVGVVGIGGLGHM--GIKLAHAMGAHVVAFTT 226 (369)
T ss_dssp CEEEEECCSHHHHH--HHHHHHHTTCEEEEEES
T ss_pred CEEEEECCCHHHHH--HHHHHHHCCCEEEEEeC
Confidence 34568887644443 44556777888888854
No 293
>2q62_A ARSH; alpha/beta, flavoprotein; 1.80A {Sinorhizobium meliloti}
Probab=26.68 E-value=77 Score=25.85 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=22.5
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
.+++|.|+.||-.. ++.-...|+.+.+.+.+.|+.+
T Consensus 33 ~~mkIliI~GS~r~-~s~t~~La~~~~~~l~~~g~ev 68 (247)
T 2q62_A 33 HRPRILILYGSLRT-VSYSRLLAEEARRLLEFFGAEV 68 (247)
T ss_dssp SCCEEEEEECCCCS-SCHHHHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEEccCCC-CCHHHHHHHHHHHHHhhCCCEE
Confidence 45566666666553 3334467777777777767654
No 294
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=26.67 E-value=72 Score=25.00 Aligned_cols=16 Identities=13% Similarity=-0.045 Sum_probs=8.5
Q ss_pred HHHHHHHHHcCCeEEe
Q 028256 40 IQLGKQLVERNIDLVY 55 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~ 55 (211)
+++++.|+++|+.|+.
T Consensus 21 ~~ia~~l~~~G~~V~~ 36 (241)
T 1dhr_A 21 SRCVQAFRARNWWVAS 36 (241)
T ss_dssp HHHHHHHHTTTCEEEE
T ss_pred HHHHHHHHhCCCEEEE
Confidence 4455555555655543
No 295
>3g1w_A Sugar ABC transporter; sugar-binding protein, bacillus halod target 11229F, transport protein, structural genomics; 2.02A {Bacillus halodurans c-125}
Probab=26.66 E-value=2.4e+02 Score=22.26 Aligned_cols=37 Identities=8% Similarity=-0.009 Sum_probs=22.9
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
+.++|+++..+. .++-+.+....+-+.+.++|+.++.
T Consensus 3 ~~~~I~~i~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~ 39 (305)
T 3g1w_A 3 LNETYMMITFQS--GMDYWKRCLKGFEDAAQALNVTVEY 39 (305)
T ss_dssp --CEEEEEESST--TSTHHHHHHHHHHHHHHHHTCEEEE
T ss_pred CCceEEEEEccC--CChHHHHHHHHHHHHHHHcCCEEEE
Confidence 346788875433 3566666666666677777777665
No 296
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=26.64 E-value=57 Score=26.19 Aligned_cols=18 Identities=17% Similarity=0.183 Sum_probs=13.6
Q ss_pred HHHHHHHHHHcCCeEEec
Q 028256 39 AIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~G 56 (211)
.+++++.|+++|+.|+.-
T Consensus 23 G~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 23 GRSHAVKLAEEGADIILF 40 (287)
T ss_dssp HHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHCCCeEEEE
Confidence 467888888888888654
No 297
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=26.60 E-value=1.2e+02 Score=25.19 Aligned_cols=30 Identities=20% Similarity=0.263 Sum_probs=26.0
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
-..|||||+. |+=.+.++...+.|.+|+..
T Consensus 30 KvalVTGas~-GIG~aiA~~la~~Ga~V~i~ 59 (273)
T 4fgs_A 30 KIAVITGATS-GIGLAAAKRFVAEGARVFIT 59 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCcCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999986 99999999999999988765
No 298
>3u43_A Colicin-E2 immunity protein; protein-protein complex, DNAse, high affinity, protein bindi; 1.72A {Escherichia coli} PDB: 2no8_A 2wpt_A
Probab=26.59 E-value=46 Score=23.67 Aligned_cols=44 Identities=9% Similarity=0.169 Sum_probs=30.3
Q ss_pred CCccchhHHHHHHHHHHcCCCCcccccceEE-----cCCHHHHHHHhhhhccC
Q 028256 152 VDGYYNSLLSFIDKAVDEGFIAPAARYIIVS-----AQTAHELICKLEVFFFF 199 (211)
Q Consensus 152 ~~g~~~~l~~~l~~~~~~g~i~~~~~~~i~~-----~~d~ee~~~~l~~~~~~ 199 (211)
.+.+.+.++..++...+ .|.-.+.|+. -++|+++++.+++|.+.
T Consensus 29 ~E~e~d~ll~~fe~ite----HP~gSDLIfyP~~~~e~SPEgIv~~IKeWRa~ 77 (94)
T 3u43_A 29 TEEDDNKLVREFERLTE----HPDGSDLIYYPRDDREDSPEGIVKEIKEWRAA 77 (94)
T ss_dssp SHHHHHHHHHHHHHHHC----CTTTTHHHHSCCTTSCSSHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHHHhCC----CCCccCeeeeCCCCCCCCHHHHHHHHHHHHHH
Confidence 34566777776666653 2444566665 47899999999999753
No 299
>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}
Probab=26.55 E-value=57 Score=26.19 Aligned_cols=31 Identities=13% Similarity=0.132 Sum_probs=20.6
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|-|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 14 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 44 (278)
T 3sx2_A 14 KVAFITGAAR-G-------QGRAHAVRLAADGADIIAVD 44 (278)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-h-------HHHHHHHHHHHCCCeEEEEe
Confidence 4566665544 2 34678888889999987543
No 300
>3eb9_A 6-phosphogluconolactonase; catalytic mechanism, pentose phosphate pathway, hydrolase, zinc binding site; HET: FLC; 2.00A {Trypanosoma brucei} PDB: 2j0e_A* 3e7f_A*
Probab=26.51 E-value=1.5e+02 Score=24.39 Aligned_cols=43 Identities=21% Similarity=0.122 Sum_probs=28.7
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHHHH---HHhCCCCCcEEEEeCCccc
Q 028256 112 ARQADAFIALPGGYGTLEELLEVITW---AQLGIHDKPVGLLNVDGYY 156 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~~~---~~lg~~~kPiill~~~g~~ 156 (211)
.+...+.|+|+||. |...+++.+.- ..+-. .+-|.+++.+.||
T Consensus 33 ~~~~~~~l~LsgGs-tP~~ly~~L~~~~~~~idw-~~~v~~f~~DEr~ 78 (266)
T 3eb9_A 33 SQQWPLSIALAGGS-TPKMTYARLHDEHLNLLRE-KRALRFFMGDERM 78 (266)
T ss_dssp GGGCSEEEEECCSH-HHHHHHHHHHHHHHHHHTT-SCCEEEEESEEES
T ss_pred HhCCCEEEEEcCCC-CHHHHHHHHHHHhhcCCCh-HHcEEEEeeeeec
Confidence 35578999999994 66677766652 22222 1567788887777
No 301
>3k3p_A D-alanine--D-alanine ligase; D-alanyl-alanine synthetase, ATP-binding, cell shape, cell W biogenesis/degradation, magnesium, manganese; 2.23A {Streptococcus mutans}
Probab=26.50 E-value=34 Score=29.84 Aligned_cols=42 Identities=12% Similarity=0.073 Sum_probs=25.7
Q ss_pred hhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 13 ALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 13 ~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
.++.++ +|+|.+|......+.=...|..+.+.|-+.||.++.
T Consensus 33 ~~m~~~-~v~vl~GG~S~E~evSl~Sa~~v~~al~~~~~~v~~ 74 (383)
T 3k3p_A 33 GSMSKE-TLVLLYGGRSAERDVSVLSAESVMRAINYDNFLVKT 74 (383)
T ss_dssp ----CE-EEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred ccccCC-eEEEEeCCCCCcchHHHHHHHHHHHHhhhcCCEEEE
Confidence 333333 566666655544454557888888888888888763
No 302
>1ydg_A Trp repressor binding protein WRBA; tetramer, structural genomics, PSI, protein structure initiative; 2.00A {Deinococcus radiodurans} SCOP: c.23.5.8 PDB: 1yrh_A*
Probab=26.47 E-value=99 Score=23.69 Aligned_cols=34 Identities=12% Similarity=0.007 Sum_probs=21.6
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
+|++|.|+.+|..++ -.+.|+.+.+.+.+.|+.+
T Consensus 5 ~mmkilii~~S~~g~---T~~la~~i~~~l~~~g~~v 38 (211)
T 1ydg_A 5 APVKLAIVFYSSTGT---GYAMAQEAAEAGRAAGAEV 38 (211)
T ss_dssp CCCEEEEEECCSSSH---HHHHHHHHHHHHHHTTCEE
T ss_pred CCCeEEEEEECCCCh---HHHHHHHHHHHHhcCCCEE
Confidence 355666666666442 2356778888887777654
No 303
>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0
Probab=26.44 E-value=50 Score=26.59 Aligned_cols=19 Identities=26% Similarity=0.298 Sum_probs=13.4
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 25 G~~~a~~L~~~G~~V~~~~ 43 (311)
T 3o26_A 25 GFEICKQLSSNGIMVVLTC 43 (311)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567777778888876554
No 304
>4h3k_B RNA polymerase II subunit A C-terminal domain PHO SSU72; heat repeat, phosphatase, RNA polymerase II, hydrolase; HET: SEP; 2.00A {Homo sapiens} PDB: 3o2q_B* 4h3h_B* 3o2s_B
Probab=26.43 E-value=73 Score=26.00 Aligned_cols=40 Identities=23% Similarity=0.307 Sum_probs=23.7
Q ss_pred hhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe-cCCC
Q 028256 13 ALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY-GGGS 59 (211)
Q Consensus 13 ~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~-GGg~ 59 (211)
.++....++||.|+|..- +.-+.=+.|.++|+.|.+ |.|.
T Consensus 20 ~mp~~~Lr~avVCaSN~N-------RSMEAH~~L~k~Gf~V~SfGTGs 60 (214)
T 4h3k_B 20 HMPSSPLRVAVVSSSNQN-------RSMEAHNILSKRGFSVRSFGTGT 60 (214)
T ss_dssp ------CEEEEEESSSSS-------HHHHHHHHHHHTTCEEEEEECSS
T ss_pred CCCCCCCeEEEECCCCcc-------hhHHHHHHHHHCCCceEeecCCC
Confidence 344455689999987752 223455678899999964 4443
No 305
>1ehi_A LMDDL2, D-alanine:D-lactate ligase; ATP-binding. grAsp motif for ATP.; HET: ADP PHY; 2.38A {Leuconostoc mesenteroides} SCOP: c.30.1.2 d.142.1.1
Probab=26.40 E-value=60 Score=27.83 Aligned_cols=37 Identities=14% Similarity=0.267 Sum_probs=25.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHH-HHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQL-VERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~l-a~~g~~lv~ 55 (211)
++|+|.+|......+.-...|.++.+.| .+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vSl~s~~~v~~al~~~~g~~v~~ 41 (377)
T 1ehi_A 4 KRVALIFGGNSSEHDVSKRSAQNFYNAIEATGKYEIIV 41 (377)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHHHHHSSEEEEE
T ss_pred cEEEEEeCCCCCCcceeHHHHHHHHHHhCcccCcEEEE
Confidence 4677777655433333245688999999 899998754
No 306
>1uf9_A TT1252 protein; P-loop, nucleotide binding domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; HET: ATP; 2.80A {Thermus thermophilus} SCOP: c.37.1.1
Probab=26.36 E-value=86 Score=23.41 Aligned_cols=35 Identities=11% Similarity=-0.027 Sum_probs=23.9
Q ss_pred hhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 14 LKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 14 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
+..+++.|+|.|++..|.+ .+++.|++.|+.++..
T Consensus 4 ~~~~~~~I~i~G~~GsGKS--------T~~~~La~~g~~~id~ 38 (203)
T 1uf9_A 4 EAKHPIIIGITGNIGSGKS--------TVAALLRSWGYPVLDL 38 (203)
T ss_dssp --CCCEEEEEEECTTSCHH--------HHHHHHHHTTCCEEEH
T ss_pred cccCceEEEEECCCCCCHH--------HHHHHHHHCCCEEEcc
Confidence 4556778999998887721 3666677778887754
No 307
>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}
Probab=26.35 E-value=1.6e+02 Score=24.60 Aligned_cols=38 Identities=16% Similarity=-0.095 Sum_probs=25.8
Q ss_pred HHHHHHHHcCCCCcccccceEEcCCHHHHHHHhhhhcc
Q 028256 161 SFIDKAVDEGFIAPAARYIIVSAQTAHELICKLEVFFF 198 (211)
Q Consensus 161 ~~l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~~~ 198 (211)
..+-.++++|-+++......+-.++.+++++.+.+-..
T Consensus 286 ~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~ 323 (343)
T 3gaz_A 286 READALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRND 323 (343)
T ss_dssp HHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTT
T ss_pred HHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCC
Confidence 33445778888875443235668899999999876543
No 308
>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*
Probab=26.33 E-value=57 Score=25.92 Aligned_cols=18 Identities=6% Similarity=0.298 Sum_probs=13.3
Q ss_pred HHHHHHHHHcCCeEEecC
Q 028256 40 IQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~GG 57 (211)
+.+++.|+++|+.|+..+
T Consensus 14 ~aia~~l~~~G~~V~~~~ 31 (248)
T 3asu_A 14 ECITRRFIQQGHKVIATG 31 (248)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEe
Confidence 467777888898877554
No 309
>1f0y_A HCDH, L-3-hydroxyacyl-COA dehydrogenase; abortive ternary complex, oxidoreductase; HET: CAA NAD; 1.80A {Homo sapiens} SCOP: a.100.1.3 c.2.1.6 PDB: 3rqs_A 1lsj_A* 1il0_A* 1lso_A* 1m76_A* 1m75_A* 1f14_A 1f12_A 1f17_A* 3had_A* 2hdh_A* 3hdh_A*
Probab=26.29 E-value=35 Score=28.17 Aligned_cols=34 Identities=21% Similarity=0.178 Sum_probs=22.7
Q ss_pred hhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 12 AALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
+.+...|++|+|+|... ....++..|+++|+.|+
T Consensus 9 ~~~~~~~~~I~VIG~G~---------mG~~iA~~la~~G~~V~ 42 (302)
T 1f0y_A 9 SAKKIIVKHVTVIGGGL---------MGAGIAQVAAATGHTVV 42 (302)
T ss_dssp ---CCCCCEEEEECCSH---------HHHHHHHHHHHTTCEEE
T ss_pred ccccccCCEEEEECCCH---------HHHHHHHHHHhCCCeEE
Confidence 44455678999996533 33467888889999875
No 310
>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}
Probab=26.24 E-value=47 Score=26.99 Aligned_cols=30 Identities=23% Similarity=0.398 Sum_probs=25.3
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 34 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 63 (275)
T 4imr_A 34 RTALVTGSSR-GIGAAIAEGLAGAGAHVILH 63 (275)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4578999875 99999999999999888776
No 311
>2bon_A Lipid kinase; DAG kinase, transferase; 1.90A {Escherichia coli} SCOP: e.52.1.2 PDB: 2jgr_A 2p1r_A
Probab=26.19 E-value=35 Score=28.94 Aligned_cols=37 Identities=19% Similarity=0.254 Sum_probs=24.8
Q ss_pred HhcCEEEEecCCcCcHHHHHHHHHHHHhC-CCCCcEEEEeC
Q 028256 113 RQADAFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLLNV 152 (211)
Q Consensus 113 ~~sDa~IvlpGG~GTL~El~~~~~~~~lg-~~~kPiill~~ 152 (211)
+..|. |+.-||=||+.|+...+.. .. ..+.|+.+++.
T Consensus 81 ~~~d~-vvv~GGDGTl~~v~~~l~~--~~~~~~~plgiiP~ 118 (332)
T 2bon_A 81 FGVAT-VIAGGGDGTINEVSTALIQ--CEGDDIPALGILPL 118 (332)
T ss_dssp HTCSE-EEEEESHHHHHHHHHHHHH--CCSSCCCEEEEEEC
T ss_pred cCCCE-EEEEccchHHHHHHHHHhh--cccCCCCeEEEecC
Confidence 44675 4556899999999987752 11 24568887744
No 312
>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2
Probab=26.18 E-value=1.4e+02 Score=23.15 Aligned_cols=59 Identities=14% Similarity=0.082 Sum_probs=0.0
Q ss_pred hhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 14 LKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 14 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+.-..++|-|.|+++ -..+++++.|+++|+.|+.-+-..---+.+.+...+.+..+..+
T Consensus 1 m~l~~k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (247)
T 3lyl_A 1 MSLNEKVALVTGASR--------GIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGL 59 (247)
T ss_dssp CTTTTCEEEESSCSS--------HHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCCCEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
No 313
>3lwb_A D-alanine--D-alanine ligase; DDL, D-alanyl--D-alanine ligase RV2981C, structural genomics, TB structural GENO consortium, TBSGC; 2.10A {Mycobacterium tuberculosis}
Probab=26.15 E-value=34 Score=29.57 Aligned_cols=38 Identities=24% Similarity=0.296 Sum_probs=24.9
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
++++|+|.+|......+.=...|..+.+.|-+.+|.++
T Consensus 9 ~~~~v~vl~GG~S~E~~vS~~sa~~v~~~l~~~~~~v~ 46 (373)
T 3lwb_A 9 RRVRVAVVFGGRSNEHAISCVSAGSILRNLDSRRFDVI 46 (373)
T ss_dssp TCEEEEEEEEC-----CHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCcEEEEEecCCCCChhhHHHHHHHHHHHhhhcCceEE
Confidence 34567777776665566667888899999988888774
No 314
>3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A*
Probab=26.14 E-value=52 Score=29.37 Aligned_cols=28 Identities=29% Similarity=0.248 Sum_probs=21.7
Q ss_pred eEEecCCCCChhHHHHHHHHh-cCCeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYD-GGRHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~-~gG~viGv 80 (211)
.|||||+. |+=.|+++...+ .|..|+.+
T Consensus 50 aLVTGas~-GIG~AiA~~LA~g~GA~Vv~~ 78 (405)
T 3zu3_A 50 VLVIGAST-GYGLAARITAAFGCGADTLGV 78 (405)
T ss_dssp EEEESCSS-HHHHHHHHHHHHHHCCEEEEE
T ss_pred EEEeCcch-HHHHHHHHHHHHhcCCEEEEE
Confidence 57888875 888888888777 78887765
No 315
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=26.14 E-value=80 Score=24.72 Aligned_cols=31 Identities=13% Similarity=0.049 Sum_probs=18.3
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
|++|.|.|+|+ + ..+++++.|+++|+.|+.-
T Consensus 1 mk~vlVTGas~-g-------IG~~~a~~l~~~G~~V~~~ 31 (257)
T 1fjh_A 1 MSIIVISGCAT-G-------IGAATRKVLEAAGHQIVGI 31 (257)
T ss_dssp CCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CCEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEE
Confidence 34566665443 1 2456777777778776543
No 316
>3tqt_A D-alanine--D-alanine ligase; cell envelope; 1.88A {Coxiella burnetii}
Probab=26.11 E-value=38 Score=29.35 Aligned_cols=37 Identities=14% Similarity=0.145 Sum_probs=27.6
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
+++|+|.+|......+.=...|..+.+.|-+.||.++
T Consensus 4 ~~~v~vl~GG~S~E~evSl~Sa~~v~~~l~~~~~~v~ 40 (372)
T 3tqt_A 4 KLHISVLCGGQSTEHEISIQSAKNIVNTLDAAKYLIS 40 (372)
T ss_dssp SEEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEE
T ss_pred CCEEEEEeccCCCccHhHHHHHHHHHHHHhhcCceEE
Confidence 3467777776665566667888999999988898874
No 317
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=26.05 E-value=65 Score=27.37 Aligned_cols=38 Identities=13% Similarity=0.149 Sum_probs=27.7
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGS 59 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~ 59 (211)
|++|.++.... .-+..-...|++.|+++||.|..=+++
T Consensus 12 ~~~Il~~~~~~----~GHv~p~l~la~~L~~~Gh~V~~~~~~ 49 (424)
T 2iya_A 12 PRHISFFNIPG----HGHVNPSLGIVQELVARGHRVSYAITD 49 (424)
T ss_dssp CCEEEEECCSC----HHHHHHHHHHHHHHHHTTCEEEEEECG
T ss_pred cceEEEEeCCC----CcccchHHHHHHHHHHCCCeEEEEeCH
Confidence 56888884332 446677789999999999988655544
No 318
>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*
Probab=25.90 E-value=70 Score=26.50 Aligned_cols=33 Identities=9% Similarity=-0.015 Sum_probs=22.6
Q ss_pred HHHHHHcCCCCcccccceEEcCCHHHHHHHhhhh
Q 028256 163 IDKAVDEGFIAPAARYIIVSAQTAHELICKLEVF 196 (211)
Q Consensus 163 l~~~~~~g~i~~~~~~~i~~~~d~ee~~~~l~~~ 196 (211)
+-.++.+|-++.. ....+-.++.+++++.+.+-
T Consensus 283 ~~~l~~~g~l~~~-i~~~~~l~~~~~A~~~~~~~ 315 (325)
T 3jyn_A 283 LFDMLASGKLKVD-GIEQYALKDAAKAQIELSAR 315 (325)
T ss_dssp HHHHHHTTSSCCC-CCEEEEGGGHHHHHHHHHTT
T ss_pred HHHHHHCCCeeCc-cccEEcHHHHHHHHHHHHcC
Confidence 3456677888765 34456678888888887654
No 319
>1e4e_A Vancomycin/teicoplanin A-type resistance protein; ligase, cell WALL, antibiotic resistance, membrane, peptidog synthesis; HET: ADP PHY; 2.5A {Enterococcus faecium} SCOP: c.30.1.2 d.142.1.1 PDB: 1e4e_B*
Probab=25.90 E-value=38 Score=28.46 Aligned_cols=37 Identities=14% Similarity=0.311 Sum_probs=24.3
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++|+|.+|......+.-...|.++.+.|.+.||.++.
T Consensus 4 ~~v~vl~gG~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (343)
T 1e4e_A 4 IKVAILFGGCSEEHDVSVKSAIEIAANINKEKYEPLY 40 (343)
T ss_dssp EEEEEEEECSSTTHHHHHHHHHHHHHHSCTTTEEEEE
T ss_pred cEEEEEeCCCCCCcchhHHHHHHHHHHhhhcCCEEEE
Confidence 4677776654433333245688888889888998754
No 320
>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A
Probab=25.82 E-value=1e+02 Score=23.74 Aligned_cols=29 Identities=21% Similarity=0.326 Sum_probs=18.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCC--eEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNI--DLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~--~lv~ 55 (211)
++|.|.|+++. ..+.+.+.|+++|+ .|+.
T Consensus 19 ~~vlVtGasg~--------iG~~l~~~L~~~G~~~~V~~ 49 (242)
T 2bka_A 19 KSVFILGASGE--------TGRVLLKEILEQGLFSKVTL 49 (242)
T ss_dssp CEEEEECTTSH--------HHHHHHHHHHHHTCCSEEEE
T ss_pred CeEEEECCCcH--------HHHHHHHHHHcCCCCCEEEE
Confidence 56777765441 24567777777787 6543
No 321
>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A
Probab=25.80 E-value=61 Score=25.74 Aligned_cols=31 Identities=13% Similarity=0.144 Sum_probs=19.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|-|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 13 k~vlVTGas~-g-------IG~aia~~l~~~G~~V~~~~ 43 (252)
T 3f1l_A 13 RIILVTGASD-G-------IGREAAMTYARYGATVILLG 43 (252)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 4556665443 2 24567788888888877554
No 322
>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}
Probab=25.79 E-value=61 Score=26.18 Aligned_cols=10 Identities=10% Similarity=0.119 Sum_probs=5.7
Q ss_pred CHHHHHHHhh
Q 028256 185 TAHELICKLE 194 (211)
Q Consensus 185 d~ee~~~~l~ 194 (211)
+|+|+.+.+.
T Consensus 221 ~pedvA~av~ 230 (266)
T 3p19_A 221 AADDVARAVL 230 (266)
T ss_dssp CHHHHHHHHH
T ss_pred CHHHHHHHHH
Confidence 5666665554
No 323
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=25.75 E-value=43 Score=28.27 Aligned_cols=40 Identities=15% Similarity=0.196 Sum_probs=27.5
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCC
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGG 58 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg 58 (211)
..+|++|.++.... .-+......|++.|.++||.|..=++
T Consensus 17 ~~~m~rIl~~~~~~----~GHv~p~l~La~~L~~~Gh~V~v~~~ 56 (415)
T 3rsc_A 17 GRHMAHLLIVNVAS----HGLILPTLTVVTELVRRGHRVSYVTA 56 (415)
T ss_dssp --CCCEEEEECCSC----HHHHGGGHHHHHHHHHTTCEEEEEEC
T ss_pred cccCCEEEEEeCCC----ccccccHHHHHHHHHHCCCEEEEEeC
Confidence 45678999886432 33445667899999999998865543
No 324
>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}
Probab=25.61 E-value=61 Score=26.05 Aligned_cols=16 Identities=13% Similarity=0.304 Sum_probs=7.8
Q ss_pred HHHHHHHHHcCCeEEe
Q 028256 40 IQLGKQLVERNIDLVY 55 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~ 55 (211)
+++++.|+++|+.|+.
T Consensus 41 ~aia~~l~~~G~~V~~ 56 (260)
T 3gem_A 41 LHCALRLLEHGHRVII 56 (260)
T ss_dssp HHHHHHHHHTTCCEEE
T ss_pred HHHHHHHHHCCCEEEE
Confidence 3444555555555443
No 325
>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A
Probab=25.51 E-value=61 Score=25.86 Aligned_cols=19 Identities=21% Similarity=0.424 Sum_probs=13.9
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 21 G~a~a~~l~~~G~~V~~~~ 39 (255)
T 4eso_A 21 GLATVRRLVEGGAEVLLTG 39 (255)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567778888888877554
No 326
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=25.51 E-value=92 Score=24.62 Aligned_cols=32 Identities=9% Similarity=-0.057 Sum_probs=20.1
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
|++|-|.|+|+ +. .+++++.|+++|+.|+.-+
T Consensus 1 Mk~vlVTGas~-gI-------G~~ia~~l~~~G~~V~~~~ 32 (254)
T 1zmt_A 1 MSTAIVTNVKH-FG-------GMGSALRLSEAGHTVACHD 32 (254)
T ss_dssp -CEEEESSTTS-TT-------HHHHHHHHHHTTCEEEECC
T ss_pred CeEEEEeCCCc-hH-------HHHHHHHHHHCCCEEEEEe
Confidence 34566665544 32 3467778888899887654
No 327
>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2
Probab=25.47 E-value=62 Score=25.86 Aligned_cols=31 Identities=19% Similarity=0.189 Sum_probs=21.2
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 14 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 44 (267)
T 1iy8_A 14 RVVLITGGGS-G-------LGRATAVRLAAEGAKLSLVD 44 (267)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665543 2 34678888899999987654
No 328
>2i87_A D-alanine-D-alanine ligase; APO; 2.00A {Staphylococcus aureus subsp} PDB: 2i8c_A* 3n8d_A* 2i80_A*
Probab=25.40 E-value=31 Score=29.34 Aligned_cols=37 Identities=11% Similarity=0.231 Sum_probs=24.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++|+|.+|......+.-...|+.+.+.|.+.||.++.
T Consensus 4 ~~v~vl~gg~s~E~~vs~~s~~~v~~al~~~g~~v~~ 40 (364)
T 2i87_A 4 ENICIVFGGKSAEHEVSILTAQNVLNAIDKDKYHVDI 40 (364)
T ss_dssp EEEEEEEECSSSCHHHHHHHHHHHHHTSCTTTEEEEE
T ss_pred cEEEEEECCCCccchhHHHHHHHHHHHHhhcCCEEEE
Confidence 4677776654433332245678888888889998753
No 329
>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}
Probab=25.38 E-value=55 Score=25.82 Aligned_cols=30 Identities=10% Similarity=-0.092 Sum_probs=19.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
++|-|.|+|+ +. .+.+++.|+++|+.|+.-
T Consensus 2 k~vlVTGas~-gI-------G~~ia~~l~~~G~~V~~~ 31 (244)
T 1zmo_A 2 VIALVTHARH-FA-------GPAAVEALTQDGYTVVCH 31 (244)
T ss_dssp CEEEESSTTS-TT-------HHHHHHHHHHTTCEEEEC
T ss_pred CEEEEECCCC-hH-------HHHHHHHHHHCCCEEEEe
Confidence 3556665544 32 346778888899988754
No 330
>3l49_A ABC sugar (ribose) transporter, periplasmic substrate-binding subunit; sugar binding/transporter, structural genomics, PSI; HET: UNL; 2.30A {Rhodobacter sphaeroides}
Probab=25.36 E-value=96 Score=24.42 Aligned_cols=41 Identities=22% Similarity=0.275 Sum_probs=0.0
Q ss_pred HHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC
Q 028256 108 KAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD 153 (211)
Q Consensus 108 k~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~ 153 (211)
+.++-...|++|+.|...-...+..+.+.. .+.|+++++..
T Consensus 55 ~~l~~~~vdgiIi~~~~~~~~~~~~~~~~~-----~~iPvV~~~~~ 95 (291)
T 3l49_A 55 QTLIAQKPDAIIEQLGNLDVLNPWLQKIND-----AGIPLFTVDTA 95 (291)
T ss_dssp HHHHHHCCSEEEEESSCHHHHHHHHHHHHH-----TTCCEEEESCC
T ss_pred HHHHHcCCCEEEEeCCChhhhHHHHHHHHH-----CCCcEEEecCC
No 331
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=25.30 E-value=1.6e+02 Score=23.44 Aligned_cols=31 Identities=23% Similarity=0.310 Sum_probs=21.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 22 k~~lVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 52 (267)
T 1vl8_A 22 RVALVTGGSR-G-------LGFGIAQGLAEAGCSVVVAS 52 (267)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 5566665544 2 35678888899999987654
No 332
>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E
Probab=25.17 E-value=54 Score=26.02 Aligned_cols=19 Identities=16% Similarity=0.246 Sum_probs=13.9
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 22 G~a~a~~l~~~G~~V~~~~ 40 (248)
T 3op4_A 22 GKAIAELLAERGAKVIGTA 40 (248)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567788888888876544
No 333
>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*
Probab=25.14 E-value=62 Score=26.12 Aligned_cols=30 Identities=17% Similarity=0.170 Sum_probs=19.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
+++-|-|+++ + ..+++++.|+++|+.|+.-
T Consensus 12 k~~lVTGas~-g-------IG~aia~~la~~G~~V~~~ 41 (286)
T 3uve_A 12 KVAFVTGAAR-G-------QGRSHAVRLAQEGADIIAV 41 (286)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-h-------HHHHHHHHHHHCCCeEEEE
Confidence 4556665443 2 3467788888888887654
No 334
>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0
Probab=25.12 E-value=62 Score=26.22 Aligned_cols=31 Identities=29% Similarity=0.409 Sum_probs=25.9
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 62 (273)
T 3uf0_A 32 RTAVVTGAGS-GIGRAIAHGYARAGAHVLAWG 62 (273)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEEc
Confidence 3578999975 999999999999998888763
No 335
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=25.12 E-value=62 Score=26.55 Aligned_cols=31 Identities=13% Similarity=0.115 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+++-|-|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 29 k~~lVTGas~-G-------IG~aia~~la~~G~~V~~~~ 59 (299)
T 3t7c_A 29 KVAFITGAAR-G-------QGRSHAITLAREGADIIAID 59 (299)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665443 2 34678888899999987543
No 336
>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}
Probab=25.12 E-value=1.3e+02 Score=23.75 Aligned_cols=62 Identities=10% Similarity=0.056 Sum_probs=0.0
Q ss_pred HhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 11 AAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 11 ~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+.-+-+++-|-|+++ -..+++++.|+++|+.|+.-+-..---+.+.+...+.|+++..+
T Consensus 5 ~~~~~l~~k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 66 (256)
T 3gaf_A 5 ESPFHLNDAVAIVTGAAA--------GIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGL 66 (256)
T ss_dssp -CTTCCTTCEEEECSCSS--------HHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEE
T ss_pred cCCCCCCCCEEEEECCCC--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
No 337
>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}
Probab=25.11 E-value=50 Score=26.32 Aligned_cols=32 Identities=13% Similarity=0.048 Sum_probs=20.2
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
.+++-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 7 ~k~~lVTGas~-G-------IG~aia~~l~~~G~~V~~~~ 38 (250)
T 3nyw_A 7 KGLAIITGASQ-G-------IGAVIAAGLATDGYRVVLIA 38 (250)
T ss_dssp CCEEEEESTTS-H-------HHHHHHHHHHHHTCEEEEEE
T ss_pred CCEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEE
Confidence 34555555443 2 34567788888898887654
No 338
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=25.09 E-value=2.7e+02 Score=22.43 Aligned_cols=12 Identities=0% Similarity=-0.047 Sum_probs=8.5
Q ss_pred hcCEEEEecCCc
Q 028256 114 QADAFIALPGGY 125 (211)
Q Consensus 114 ~sDa~IvlpGG~ 125 (211)
.-|.+|-..|..
T Consensus 125 ~iD~lvnnAg~~ 136 (291)
T 3ijr_A 125 SLNILVNNVAQQ 136 (291)
T ss_dssp SCCEEEECCCCC
T ss_pred CCCEEEECCCCc
Confidence 468888877654
No 339
>2htm_A Thiazole biosynthesis protein THIG; thiamin biosynthesis, THIG, thermus thermophilus HB8, structural genomics, NPPSFA; 2.30A {Thermus thermophilus}
Probab=25.03 E-value=3.1e+02 Score=23.03 Aligned_cols=92 Identities=22% Similarity=0.333 Sum_probs=53.8
Q ss_pred HHHHHHHHHHcCCeEE-ecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCC-CCCceeeecCCHHHHHHHHHH-hc
Q 028256 39 AIQLGKQLVERNIDLV-YGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITG-DTVGEVKAVSGMHQRKAEMAR-QA 115 (211)
Q Consensus 39 A~~lG~~la~~g~~lv-~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~-~~~~~~~~~~~~~~Rk~~m~~-~s 115 (211)
..+-++.|.+.|+.++ |.. + -+ ..++...+.|...+ +|-. ..... ..+. ++ +--..+.+ ..
T Consensus 113 tv~aa~~L~k~Gf~Vlpy~~-~-D~--~~ak~l~~~G~~aV--mPlg---~pIGsG~Gi~------~~-~~L~~i~~~~~ 176 (268)
T 2htm_A 113 TLKAAERLIEEDFLVLPYMG-P-DL--VLAKRLAALGTATV--MPLA---APIGSGWGVR------TR-ALLELFAREKA 176 (268)
T ss_dssp HHHHHHHHHHTTCEECCEEC-S-CH--HHHHHHHHHTCSCB--EEBS---SSTTTCCCST------TH-HHHHHHHHTTT
T ss_pred HHHHHHHHHHCCCEEeeccC-C-CH--HHHHHHHhcCCCEE--EecC---ccCcCCcccC------CH-HHHHHHHHhcC
Confidence 4556777888898877 443 3 34 55555666666544 4411 11111 1111 22 22445556 57
Q ss_pred C-EEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 116 D-AFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 116 D-a~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
| .-|+..||++|.+.+..++. +|. --+++++
T Consensus 177 ~~vPVI~~GGI~tpsDAa~Ame---LGA---dgVlVgS 208 (268)
T 2htm_A 177 SLPPVVVDAGLGLPSHAAEVME---LGL---DAVLVNT 208 (268)
T ss_dssp TSSCBEEESCCCSHHHHHHHHH---TTC---CEEEESH
T ss_pred CCCeEEEeCCCCCHHHHHHHHH---cCC---CEEEECh
Confidence 7 88888999999999987765 443 3356554
No 340
>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}
Probab=25.03 E-value=46 Score=27.38 Aligned_cols=29 Identities=24% Similarity=0.241 Sum_probs=25.0
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.+.++...+.|.+|+..
T Consensus 11 valVTGas~-GIG~aia~~la~~Ga~Vvi~ 39 (255)
T 4g81_D 11 TALVTGSAR-GLGFAYAEGLAAAGARVILN 39 (255)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEC
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 568999986 99999999999999988765
No 341
>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}
Probab=25.02 E-value=54 Score=26.48 Aligned_cols=30 Identities=33% Similarity=0.464 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 15 k~vlVTGas~-GIG~aia~~l~~~G~~V~~~ 44 (269)
T 3vtz_A 15 KVAIVTGGSS-GIGLAVVDALVRYGAKVVSV 44 (269)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3567999875 99999999999999888876
No 342
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=24.98 E-value=63 Score=26.16 Aligned_cols=42 Identities=10% Similarity=0.100 Sum_probs=23.2
Q ss_pred HHHHHHHHHHcCCeEEecCCC-CChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGS-IGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~-~GlM~a~a~gA~~~gG~viGv 80 (211)
.+++++.|+++|+.|+..... ..--+.+.+...+.|+++..+
T Consensus 44 G~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 86 (271)
T 3v2g_A 44 GAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAI 86 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEE
Confidence 456777778888887654322 122333444444456666555
No 343
>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*
Probab=24.89 E-value=63 Score=26.21 Aligned_cols=39 Identities=15% Similarity=0.136 Sum_probs=21.4
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-. .+.+.+-+.+.++.+..+
T Consensus 18 G~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 56 (281)
T 3zv4_A 18 GRALVDRFVAEGARVAVLDKS---AERLRELEVAHGGNAVGV 56 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHTBTTEEEE
T ss_pred HHHHHHHHHHCcCEEEEEeCC---HHHHHHHHHHcCCcEEEE
Confidence 456777778888887654422 222333333445555555
No 344
>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}
Probab=24.86 E-value=63 Score=26.24 Aligned_cols=30 Identities=20% Similarity=0.272 Sum_probs=25.4
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 30 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 59 (280)
T 4da9_A 30 PVAIVTGGRR-GIGLGIARALAASGFDIAIT 59 (280)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEecCCC-HHHHHHHHHHHHCCCeEEEE
Confidence 3478999976 99999999999999888776
No 345
>2iuy_A Avigt4, glycosyltransferase; antibiotics, family GT-4, avilamycin A; HET: MES; 2.1A {Streptomyces viridochromogenes} PDB: 2iv3_A*
Probab=24.86 E-value=1.2e+02 Score=24.47 Aligned_cols=37 Identities=16% Similarity=0.082 Sum_probs=24.4
Q ss_pred cceEEEEeCC-----------CCC-CCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGS-----------SPG-KSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs-----------~~~-~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
+++|++++.+ -.. ...-....+.++++.|+++||.+.
T Consensus 3 ~mkIl~v~~~~~~~~~~~~~p~~p~~~gG~~~~~~~l~~~L~~~G~~v~ 51 (342)
T 2iuy_A 3 PLKVALVNIPLRVPGSDAWISVPPQGYGGIQWVVANLMDGLLELGHEVF 51 (342)
T ss_dssp CCEEEEECCCCBCTTSSSBCCSSCSSSCHHHHHHHHHHHHHHHTTCEEE
T ss_pred ccEEEEEeccccccCcccccccCcccCChHHHHHHHHHHHHHHcCCeEE
Confidence 4689999765 011 111234567899999999998763
No 346
>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*
Probab=24.84 E-value=65 Score=25.46 Aligned_cols=31 Identities=13% Similarity=0.281 Sum_probs=20.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+..+
T Consensus 8 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 38 (249)
T 2ew8_A 8 KLAVITGGAN-G-------IGRAIAERFAVEGADIAIAD 38 (249)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEc
Confidence 4566665544 2 34678888888999887654
No 347
>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A
Probab=24.80 E-value=65 Score=25.64 Aligned_cols=51 Identities=14% Similarity=0.133 Sum_probs=28.9
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+-. .+...+.+.+.++.+..+
T Consensus 9 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 59 (259)
T 4e6p_A 9 KSALITGSAR-G-------IGRAFAEAYVREGATVAIADID---IERARQAAAEIGPAAYAV 59 (259)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCTTEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCCceEE
Confidence 4566665543 2 3467888888999998755422 222333333445555554
No 348
>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*
Probab=24.80 E-value=65 Score=25.26 Aligned_cols=28 Identities=14% Similarity=0.414 Sum_probs=24.0
Q ss_pred eEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 4 vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 31 (257)
T 1fjh_A 4 IVISGCAT-GIGAATRKVLEAAGHQIVGI 31 (257)
T ss_dssp EEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 58999975 99889999888888888876
No 349
>4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A*
Probab=24.76 E-value=2.6e+02 Score=22.03 Aligned_cols=17 Identities=12% Similarity=0.245 Sum_probs=11.4
Q ss_pred HHHHHHHHHHcCCeEEe
Q 028256 39 AIQLGKQLVERNIDLVY 55 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~ 55 (211)
.+++++.|+++|+.++.
T Consensus 39 G~~la~~l~~~G~~v~i 55 (267)
T 4iiu_A 39 GRAIARQLAADGFNIGV 55 (267)
T ss_dssp HHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHCCCEEEE
Confidence 45677777777777744
No 350
>3hr4_A Nitric oxide synthase, inducible; inducible nitric oxide synthase, NOS, INOS, CALM binding, FAD, FMN, heme, iron, metal-binding, NADP, oxidore phosphoprotein; HET: FMN; 2.50A {Homo sapiens}
Probab=24.76 E-value=45 Score=27.03 Aligned_cols=31 Identities=26% Similarity=0.339 Sum_probs=20.2
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
.++|.|+.||..++.+ +.|++|++.+ ++|+.
T Consensus 40 ~~kv~IlYgS~tGnte---~~A~~La~~l-~~g~~ 70 (219)
T 3hr4_A 40 RVRVTILFATETGKSE---ALAWDLGALF-SCAFN 70 (219)
T ss_dssp SCEEEEEEECSSSHHH---HHHHHHHHHH-TTTSE
T ss_pred CCcEEEEEECCchHHH---HHHHHHHHHH-HcCCC
Confidence 4567777778877543 4577777776 45654
No 351
>3lhi_A Putative 6-phosphogluconolactonase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.33A {Neisseria gonorrhoeae}
Probab=24.72 E-value=1.1e+02 Score=24.56 Aligned_cols=44 Identities=18% Similarity=0.293 Sum_probs=31.3
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccc
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYY 156 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~ 156 (211)
.+.+...+.|+|+|| .|...+++.+.- -+..=+.|.+++.+.||
T Consensus 29 ~i~~~~~~~l~lsgG-stp~~~y~~L~~--~~i~w~~v~~f~~DEr~ 72 (232)
T 3lhi_A 29 ALDEKGGAVLAVSGG-RSPIAFFNALSQ--KDLDWKNVGITLADERI 72 (232)
T ss_dssp HHHHHSCEEEEECCS-STTHHHHHHHHT--SCCCGGGEEEEESEEES
T ss_pred HHHhCCCEEEEEeCC-CCHHHHHHHHHh--cCCCchheEEEEeeecc
Confidence 344668899999999 478888887762 22222567888888777
No 352
>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=24.71 E-value=82 Score=25.15 Aligned_cols=30 Identities=13% Similarity=0.245 Sum_probs=25.6
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 12 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 41 (264)
T 3ucx_A 12 KVVVISGVGP-ALGTTLARRCAEQGADLVLA 41 (264)
T ss_dssp CEEEEESCCT-THHHHHHHHHHHTTCEEEEE
T ss_pred cEEEEECCCc-HHHHHHHHHHHHCcCEEEEE
Confidence 3578999976 99999999999999888776
No 353
>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}
Probab=24.51 E-value=58 Score=25.41 Aligned_cols=32 Identities=19% Similarity=0.220 Sum_probs=23.1
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcC-CeEEec
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERN-IDLVYG 56 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g-~~lv~G 56 (211)
.|++|.|.|+++. ....+.+.|+++| +.|+.-
T Consensus 22 ~mk~vlVtGatG~--------iG~~l~~~L~~~G~~~V~~~ 54 (236)
T 3qvo_A 22 HMKNVLILGAGGQ--------IARHVINQLADKQTIKQTLF 54 (236)
T ss_dssp CCEEEEEETTTSH--------HHHHHHHHHTTCTTEEEEEE
T ss_pred cccEEEEEeCCcH--------HHHHHHHHHHhCCCceEEEE
Confidence 3678999976552 3567888899999 776543
No 354
>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*
Probab=24.46 E-value=66 Score=25.54 Aligned_cols=31 Identities=23% Similarity=0.323 Sum_probs=20.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+++++.|+++|+.|+.-+
T Consensus 6 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 36 (254)
T 1hdc_A 6 KTVIITGGAR-G-------LGAEAARQAVAAGARVVLAD 36 (254)
T ss_dssp SEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665544 1 34567788888898876554
No 355
>3lrx_A Putative hydrogenase; alpha-beta protein, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.60A {Pyrococcus furiosus}
Probab=24.46 E-value=67 Score=24.01 Aligned_cols=35 Identities=26% Similarity=0.276 Sum_probs=24.8
Q ss_pred HHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCe
Q 028256 42 LGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRH 76 (211)
Q Consensus 42 lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~ 76 (211)
+-+.+.......+|=+||.++|+++.+.+.+.|-.
T Consensus 104 l~~~l~~~~~~~vy~CGP~~mm~~v~~~l~~~Gv~ 138 (158)
T 3lrx_A 104 VRELLESEDWDLVFMVGPVGDQKQVFEVVKEYGVP 138 (158)
T ss_dssp HHHHHHHSCCSEEEEESCHHHHHHHHHHHGGGTCC
T ss_pred HHHhhccCCCCEEEEECCHHHHHHHHHHHHHcCCC
Confidence 33444444555666667889999999998888755
No 356
>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A
Probab=24.46 E-value=2.2e+02 Score=22.57 Aligned_cols=60 Identities=12% Similarity=0.021 Sum_probs=0.0
Q ss_pred hhcCcceEEEEeC--CCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCC-eEEEE
Q 028256 14 LKSRFKRVCVFCG--SSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGR-HVLGV 80 (211)
Q Consensus 14 ~~~~~~~I~Vfgg--s~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG-~viGv 80 (211)
+.+...+++|.-| |+.+ ..+.+++.||++|+.|+.-+-..---+.+.+...+.++ .+..+
T Consensus 1 M~~l~gK~alVTGaa~~~G-------IG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~ 63 (256)
T 4fs3_A 1 MLNLENKTYVIMGIANKRS-------IAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLY 63 (256)
T ss_dssp CCCCTTCEEEEECCCSTTC-------HHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEE
T ss_pred CcCCCCCEEEEECCCCCch-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEE
No 357
>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}
Probab=24.36 E-value=82 Score=22.62 Aligned_cols=74 Identities=14% Similarity=0.061 Sum_probs=32.6
Q ss_pred cCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecC--CHHHHHHHHHHhcCEEEEecCCc
Q 028256 49 RNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVS--GMHQRKAEMARQADAFIALPGGY 125 (211)
Q Consensus 49 ~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~--~~~~Rk~~m~~~sDa~IvlpGG~ 125 (211)
+++.+|.|+|..| ..+++...+.|-.++++-.+...-.+...... ..+..+ +-..-+..-+..+|++|+.-+.-
T Consensus 7 ~~~viIiG~G~~G--~~la~~L~~~g~~v~vid~~~~~~~~~~~~g~-~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~ 82 (140)
T 3fwz_A 7 CNHALLVGYGRVG--SLLGEKLLASDIPLVVIETSRTRVDELRERGV-RAVLGNAANEEIMQLAHLECAKWLILTIPNG 82 (140)
T ss_dssp CSCEEEECCSHHH--HHHHHHHHHTTCCEEEEESCHHHHHHHHHTTC-EEEESCTTSHHHHHHTTGGGCSEEEECCSCH
T ss_pred CCCEEEECcCHHH--HHHHHHHHHCCCCEEEEECCHHHHHHHHHcCC-CEEECCCCCHHHHHhcCcccCCEEEEECCCh
Confidence 3566677664422 23344445566677776432210000001111 122221 22222222356789988876653
No 358
>3k1y_A Oxidoreductase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG, CDR100D; 2.50A {Corynebacterium diphtheriae} PDB: 3k20_A
Probab=24.36 E-value=1.2e+02 Score=23.57 Aligned_cols=28 Identities=14% Similarity=0.171 Sum_probs=18.4
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHH
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGK 44 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~ 44 (211)
.+|++|.++.||...+ +.-...++.+.+
T Consensus 9 ~~~~~il~i~GS~r~~-S~t~~La~~~~~ 36 (191)
T 3k1y_A 9 SHMRTLAVISAGLSTP-SSTRQIADSISE 36 (191)
T ss_dssp CCSEEEEEEECCCSSS-CHHHHHHHHHHH
T ss_pred hhhceEEEEECCCCCC-CHHHHHHHHHHH
Confidence 4688999998887653 333455665555
No 359
>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}
Probab=24.24 E-value=66 Score=26.14 Aligned_cols=42 Identities=17% Similarity=0.203 Sum_probs=24.1
Q ss_pred HHHHHHHHHHcCCeEEecCC-CCChhHHHHHHHHhc-CCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGG-SIGLMGLVSQAVYDG-GRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg-~~GlM~a~a~gA~~~-gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+- ...-.+.+.+...+. ++.+..+
T Consensus 38 G~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 81 (281)
T 3v2h_A 38 GLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHH 81 (281)
T ss_dssp HHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEE
Confidence 46788888999999876553 212233333333333 5566555
No 360
>3iev_A GTP-binding protein ERA; ERA, GTPase, KH domain, anti-SD, 16S rRNA, 30S ribosome ASSE GTP-binding, nucleotide-binding; HET: GNP; 1.90A {Aquifex aeolicus} PDB: 3r9w_A* 3r9x_A*
Probab=24.22 E-value=2.3e+02 Score=23.31 Aligned_cols=91 Identities=18% Similarity=0.118 Sum_probs=46.5
Q ss_pred HHHHHHhcCEEEEe-cCCcC-cHHHHHHHHHHHHhCCCCCcEEEE-eCCccc---hhHHHHHHHHHHcCCCCcccccceE
Q 028256 108 KAEMARQADAFIAL-PGGYG-TLEELLEVITWAQLGIHDKPVGLL-NVDGYY---NSLLSFIDKAVDEGFIAPAARYIIV 181 (211)
Q Consensus 108 k~~m~~~sDa~Ivl-pGG~G-TL~El~~~~~~~~lg~~~kPiill-~~~g~~---~~l~~~l~~~~~~g~i~~~~~~~i~ 181 (211)
-...+..+|++|++ ...-+ +.++.. .| +.++....+|++++ |.-+.- +.+...++.+.+..- ....++
T Consensus 86 ~~~~l~~aD~il~VvD~~~~~~~~~~~-~~-~~~l~~~~~pvilV~NK~Dl~~~~~~~~~~~~~l~~~~~----~~~~i~ 159 (308)
T 3iev_A 86 AKQSLEEADVILFMIDATEGWRPRDEE-IY-QNFIKPLNKPVIVVINKIDKIGPAKNVLPLIDEIHKKHP----ELTEIV 159 (308)
T ss_dssp HHHHHHHCSEEEEEEETTTBSCHHHHH-HH-HHHTGGGCCCEEEEEECGGGSSSGGGGHHHHHHHHHHCT----TCCCEE
T ss_pred HHHHhhcCCEEEEEEeCCCCCCchhHH-HH-HHHHHhcCCCEEEEEECccCCCCHHHHHHHHHHHHHhcc----CCCeEE
Confidence 34456789986655 34333 333332 21 23333356888876 653322 234444444433210 001122
Q ss_pred E-----cCCHHHHHHHhhhhccCceeEE
Q 028256 182 S-----AQTAHELICKLEVFFFFFFWLF 204 (211)
Q Consensus 182 ~-----~~d~ee~~~~l~~~~~~~~~~~ 204 (211)
. -+..+++++.|.++.+...|.|
T Consensus 160 ~vSA~~g~gv~~L~~~l~~~l~~~~~~~ 187 (308)
T 3iev_A 160 PISALKGANLDELVKTILKYLPEGEPLF 187 (308)
T ss_dssp ECBTTTTBSHHHHHHHHHHHSCBCCCSS
T ss_pred EEeCCCCCCHHHHHHHHHHhCccCCCCC
Confidence 2 2568899999998877655554
No 361
>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0
Probab=24.22 E-value=1.2e+02 Score=24.10 Aligned_cols=29 Identities=21% Similarity=0.281 Sum_probs=23.8
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 40 (287)
T 3pxx_A 12 VVLVTGGAR-GQGRSHAVKLAEEGADIILF 40 (287)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-hHHHHHHHHHHHCCCeEEEE
Confidence 567899875 88888899888888888776
No 362
>2yv2_A Succinyl-COA synthetase alpha chain; COA-binding domain, ligase, structural genomics, NPPSFA; 2.20A {Aeropyrum pernix}
Probab=24.17 E-value=2.4e+02 Score=23.48 Aligned_cols=89 Identities=15% Similarity=0.078 Sum_probs=46.0
Q ss_pred CHHHHHHHHHHh--cCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCCccchhHHHHHHHHHHcCCCC-----c-
Q 028256 103 GMHQRKAEMARQ--ADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVDGYYNSLLSFIDKAVDEGFIA-----P- 174 (211)
Q Consensus 103 ~~~~Rk~~m~~~--sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~g~~~~l~~~l~~~~~~g~i~-----~- 174 (211)
++.+=.+.|.+. .+++++..-+.|+.+|....+. +-...+|||+++..+ -..+--. .+-..|-+- .
T Consensus 193 ~~~d~l~~~~~D~~T~~I~l~~E~~~~~~~~~~~~~--~~~~~~KPVv~~k~G-~s~~~~~---~~sHtgal~~~~~g~~ 266 (297)
T 2yv2_A 193 SFTEALKLFQEDPQTEALVLIGEIGGDMEERAAEMI--KKGEFTKPVIAYIAG-RTAPPEK---RMGHAGAIIMMGTGTY 266 (297)
T ss_dssp CHHHHHHHHHTCTTCSEEEEEECSSSSHHHHHHHHH--HTTSCCSCEEEEESC-CC---------------------CSH
T ss_pred CHHHHHHHHhcCCCCCEEEEEEeeCCCHHHHHHHHH--HhccCCCCEEEEEeC-CCCcccc---ccCCccccccCCCCCH
Confidence 454444444442 4566666667787776554433 222357999999653 3331111 011122221 0
Q ss_pred c------cccceEEcCCHHHHHHHhhhhc
Q 028256 175 A------ARYIIVSAQTAHELICKLEVFF 197 (211)
Q Consensus 175 ~------~~~~i~~~~d~ee~~~~l~~~~ 197 (211)
+ ...-+..++|++|+++.++..+
T Consensus 267 ~~~~aa~~~aGv~~v~~~~el~~~~~~~~ 295 (297)
T 2yv2_A 267 EGKVKALREAGVEVAETPFEVPELVRKAL 295 (297)
T ss_dssp HHHHHHHHTTTCEEESSGGGHHHHHHHHC
T ss_pred HHHHHHHHHcCCeEeCCHHHHHHHHHHHh
Confidence 0 1223788999999999987654
No 363
>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A
Probab=24.16 E-value=69 Score=25.08 Aligned_cols=31 Identities=23% Similarity=0.360 Sum_probs=20.6
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 3 k~vlVTGas~-g-------iG~~~a~~l~~~G~~V~~~~ 33 (239)
T 2ekp_A 3 RKALVTGGSR-G-------IGRAIAEALVARGYRVAIAS 33 (239)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566776544 1 34577888888899877554
No 364
>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}
Probab=24.09 E-value=72 Score=25.62 Aligned_cols=19 Identities=11% Similarity=0.130 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 43 G~aia~~l~~~G~~Vi~~~ 61 (281)
T 3ppi_A 43 GEATVRRLHADGLGVVIAD 61 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4677888888898887654
No 365
>3fkq_A NTRC-like two-domain protein; RER070207001320, structural GE joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: ATP 2PE; 2.10A {Eubacterium rectale}
Probab=24.08 E-value=1.1e+02 Score=26.18 Aligned_cols=37 Identities=14% Similarity=0.075 Sum_probs=25.7
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++++.|+|++ ...+.... ..|..||..||++|..++.
T Consensus 141 ~~~kvIav~s-~KGGvGKT--T~a~nLA~~La~~g~rVll 177 (373)
T 3fkq_A 141 DKSSVVIFTS-PCGGVGTS--TVAAACAIAHANMGKKVFY 177 (373)
T ss_dssp TSCEEEEEEC-SSTTSSHH--HHHHHHHHHHHHHTCCEEE
T ss_pred CCceEEEEEC-CCCCChHH--HHHHHHHHHHHhCCCCEEE
Confidence 4567788884 44454443 5688999999999976643
No 366
>2o2s_A Enoyl-acyl carrier reductase; enoyl reductase, triclosan, rossmann fold, oxidoreductase; HET: NAD TCL; 2.60A {Toxoplasma gondii} PDB: 2o50_A 3nj8_A*
Probab=24.02 E-value=83 Score=25.89 Aligned_cols=17 Identities=18% Similarity=0.339 Sum_probs=11.5
Q ss_pred HHHHHHHHHcCCeEEec
Q 028256 40 IQLGKQLVERNIDLVYG 56 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~G 56 (211)
+++++.|+++|+.|+..
T Consensus 25 ~aia~~la~~G~~Vv~~ 41 (315)
T 2o2s_A 25 WAIAKHLASAGARVALG 41 (315)
T ss_dssp HHHHHHHHTTTCEEEEE
T ss_pred HHHHHHHHHCCCEEEEE
Confidence 45667777777776654
No 367
>2fz5_A Flavodoxin; alpha/beta doubly-wound topology, non-covalently bound FMN, electron transport; HET: FNR; NMR {Megasphaera elsdenii} SCOP: c.23.5.1
Probab=24.02 E-value=63 Score=22.68 Aligned_cols=29 Identities=14% Similarity=0.179 Sum_probs=16.7
Q ss_pred EEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 22 CVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 22 ~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
.|+.+|..++. .+.|+.+++.+.+.|+.+
T Consensus 3 ~iiy~S~tGnT---~~~a~~i~~~l~~~g~~v 31 (137)
T 2fz5_A 3 EIVYWSGTGNT---EAMANEIEAAVKAAGADV 31 (137)
T ss_dssp EEEECCSSSHH---HHHHHHHHHHHHHTTCCE
T ss_pred EEEEECCCChH---HHHHHHHHHHHHhCCCeE
Confidence 34445665532 245677777776666554
No 368
>1yt5_A Inorganic polyphosphate/ATP-NAD kinase; domain 1: alpha/beta domain2: beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Thermotoga maritima}
Probab=24.01 E-value=43 Score=27.39 Aligned_cols=32 Identities=22% Similarity=0.256 Sum_probs=21.4
Q ss_pred hcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 114 QADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 114 ~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.+|.+ +.-||=||+.+....+. . .+|++=+|.
T Consensus 41 ~~D~v-v~~GGDGTll~~a~~~~-----~-~~PilGIn~ 72 (258)
T 1yt5_A 41 TADLI-VVVGGDGTVLKAAKKAA-----D-GTPMVGFKA 72 (258)
T ss_dssp CCSEE-EEEECHHHHHHHHTTBC-----T-TCEEEEEES
T ss_pred CCCEE-EEEeCcHHHHHHHHHhC-----C-CCCEEEEEC
Confidence 45754 55678999999875432 2 678776664
No 369
>3hn6_A Glucosamine-6-phosphate deaminase; niaid, ssgcid, decode, UW, SBRI, infectious disease, LYME DI non-hodgkin lymphomas, neuroborreliosis; 2.20A {Borrelia burgdorferi}
Probab=23.97 E-value=1e+02 Score=25.91 Aligned_cols=78 Identities=19% Similarity=0.117 Sum_probs=40.5
Q ss_pred EEEEecCCcCcHHHHHHHHHHHHh-C-CCCCcEEEEeCCccc-------hhHHHHHH-HHHHcCCCCcccccceEE-cCC
Q 028256 117 AFIALPGGYGTLEELLEVITWAQL-G-IHDKPVGLLNVDGYY-------NSLLSFID-KAVDEGFIAPAARYIIVS-AQT 185 (211)
Q Consensus 117 a~IvlpGG~GTL~El~~~~~~~~l-g-~~~kPiill~~~g~~-------~~l~~~l~-~~~~~g~i~~~~~~~i~~-~~d 185 (211)
+.|+|+||. |...+++.+.-... + ..=..|.+++.+.|| +....+++ ++.+.--++++....+-- ..|
T Consensus 56 ~~l~LsgGs-TP~~~y~~L~~~~~~~~idw~~v~~f~~DEr~gvp~~~~~Sn~~~~~~~Ll~~v~i~~~~i~~~~~~~~d 134 (289)
T 3hn6_A 56 FILGLPTGS-SPIGMYKNLIELNKNKKISFQNVITFNMDEYIGIEENHPESYHSFMWNNFFSHIDIKKENINILNGNASN 134 (289)
T ss_dssp EEEEECCSS-TTHHHHHHHHHHHHTTSCCCTTEEEEESEEESSCCTTSTTSHHHHHHHHTGGGSCCCGGGEECCCTTCSS
T ss_pred EEEEECCCc-cHHHHHHHHHHhHhhcCCCchheEEEeCcceecCCCCcHHHHHHHHHHHhhccCCCCHHHeecCCCCCCC
Confidence 789999993 44455554442211 1 222468888888888 34555553 444432233322222211 246
Q ss_pred HHHHHHHhhh
Q 028256 186 AHELICKLEV 195 (211)
Q Consensus 186 ~ee~~~~l~~ 195 (211)
+++..+...+
T Consensus 135 ~~~~a~~Ye~ 144 (289)
T 3hn6_A 135 LKKECEEYEK 144 (289)
T ss_dssp HHHHHHHHHH
T ss_pred HHHHHHHHHH
Confidence 7766555443
No 370
>3fwy_A Light-independent protochlorophyllide reductase I ATP-binding protein; BCHL, electron donor, DPOR, Fe protein, nitrogenase; HET: ADP; 1.63A {Rhodobacter sphaeroides 2}
Probab=23.97 E-value=1e+02 Score=25.96 Aligned_cols=42 Identities=14% Similarity=0.068 Sum_probs=25.2
Q ss_pred HHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 9 QAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 9 ~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
+.+......-+.|||+| --|.... ..|..|+..||+.|+.++
T Consensus 39 ~~~~~~i~~aKVIAIaG--KGGVGKT--TtavNLA~aLA~~GkkVl 80 (314)
T 3fwy_A 39 LDEADKITGAKVFAVYG--KGGIGKS--TTSSNLSAAFSILGKRVL 80 (314)
T ss_dssp --------CCEEEEEEC--STTSSHH--HHHHHHHHHHHHTTCCEE
T ss_pred cCcccCCCCceEEEEEC--CCccCHH--HHHHHHHHHHHHCCCeEE
Confidence 33444445567899994 3233433 568899999999999774
No 371
>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}
Probab=23.96 E-value=66 Score=26.08 Aligned_cols=18 Identities=22% Similarity=0.324 Sum_probs=13.4
Q ss_pred HHHHHHHHHcCCeEEecC
Q 028256 40 IQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~GG 57 (211)
+.+++.|+++|+.|+..+
T Consensus 35 ~aia~~La~~G~~V~~~~ 52 (272)
T 2nwq_A 35 EACARRFAEAGWSLVLTG 52 (272)
T ss_dssp HHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHCCCEEEEEE
Confidence 467777888898887654
No 372
>3u7i_A FMN-dependent NADH-azoreductase 1; structural genomics, the center for structural genomics of I diseases, csgid, oxidoreductase; HET: MSE; 1.75A {Bacillus anthracis}
Probab=23.96 E-value=1.4e+02 Score=23.74 Aligned_cols=34 Identities=6% Similarity=-0.019 Sum_probs=20.6
Q ss_pred cCcceEEEEeCCCC--CCCHHHHHHHHHHHHHHHHc
Q 028256 16 SRFKRVCVFCGSSP--GKSPSYQLAAIQLGKQLVER 49 (211)
Q Consensus 16 ~~~~~I~Vfggs~~--~~~~~~~~~A~~lG~~la~~ 49 (211)
+.|++|.|+-||-. +.++.-.+.++.+.+.+.++
T Consensus 2 ~~MmkIL~I~gSpr~~~~~S~s~~L~~~~~~~l~~~ 37 (223)
T 3u7i_A 2 NAMNKTLIINAHPKVDDTSSVSIKVFKHFLESYKEL 37 (223)
T ss_dssp -CCCEEEEEECCTTTTCTTSHHHHHHHHHHHHHHHH
T ss_pred CccCEEEEEEeCCCCCCCCChHHHHHHHHHHHHHHh
Confidence 56778888877755 13444446666676666654
No 373
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=23.92 E-value=2.3e+02 Score=23.42 Aligned_cols=67 Identities=10% Similarity=0.087 Sum_probs=38.9
Q ss_pred cceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 18 FKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 18 ~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
..-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 36 v~gl~~~GttGE~~~Ls~~Er~~v~~-~~~~~~~gr~pviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (292)
T 2ojp_A 36 TSAIVSVGTTGESATLNHDEHADVVM-MTLDLADGRIPVIAGTGANATAEAISLTQRFNDSGIVGCLTVTPYY 107 (292)
T ss_dssp CCEEEESSTTTTGGGSCHHHHHHHHH-HHHHHHTTSSCEEEECCCSSHHHHHHHHHHTTTSSCSEEEEECCCS
T ss_pred CCEEEECccccchhhCCHHHHHHHHH-HHHHHhCCCCcEEEecCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44566665444332 234433333 3333344457888888876777776 5556677887777766554
No 374
>3afo_A NADH kinase POS5; alpha/beta+BETA sandwich, ATP-binding, mitochondrion NADP, nucleotide-binding, transferase, transit peptide; HET: NAI; 2.00A {Saccharomyces cerevisiae}
Probab=23.91 E-value=1.4e+02 Score=26.24 Aligned_cols=31 Identities=23% Similarity=0.282 Sum_probs=22.0
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVER 49 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~ 49 (211)
..|++|+|+.- .. ++...+.++++.++|.++
T Consensus 39 ~~~k~V~II~n--~~-~~~~~~~~~~l~~~L~~~ 69 (388)
T 3afo_A 39 NPLQNVYITKK--PW-TPSTREAMVEFITHLHES 69 (388)
T ss_dssp SCCCEEEEEEC--TT-CHHHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEEEe--CC-CHHHHHHHHHHHHHHHHh
Confidence 44788999963 22 566677788888888765
No 375
>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*
Probab=23.91 E-value=67 Score=25.18 Aligned_cols=30 Identities=30% Similarity=0.299 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 8 k~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 37 (241)
T 1dhr_A 8 RRVLVYGGRG-ALGSRCVQAFRARNWWVASI 37 (241)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHTTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHhCCCEEEEE
Confidence 3578999975 99899999998998888776
No 376
>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*
Probab=23.91 E-value=68 Score=25.64 Aligned_cols=19 Identities=11% Similarity=0.207 Sum_probs=14.9
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+..+
T Consensus 21 G~aia~~l~~~G~~V~~~~ 39 (265)
T 3lf2_A 21 GLATVELLLEAGAAVAFCA 39 (265)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4678888889999987655
No 377
>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}
Probab=23.89 E-value=69 Score=26.05 Aligned_cols=19 Identities=5% Similarity=0.356 Sum_probs=12.6
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 42 G~aia~~la~~G~~V~~~~ 60 (277)
T 3gvc_A 42 GLAVARRLADEGCHVLCAD 60 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3457777777787776544
No 378
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=23.89 E-value=2.3e+02 Score=24.01 Aligned_cols=13 Identities=15% Similarity=0.023 Sum_probs=6.7
Q ss_pred HHHHHHHHHHcCC
Q 028256 39 AIQLGKQLVERNI 51 (211)
Q Consensus 39 A~~lG~~la~~g~ 51 (211)
-+++.+.+.++|.
T Consensus 57 l~~lv~~li~~Gv 69 (332)
T 2r8w_A 57 FSALIARLDAAEV 69 (332)
T ss_dssp HHHHHHHHHHHTC
T ss_pred HHHHHHHHHHcCC
Confidence 3455555555554
No 379
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=23.88 E-value=61 Score=25.42 Aligned_cols=33 Identities=18% Similarity=0.193 Sum_probs=22.4
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+.++|-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 13 ~~k~vlVTGas~-g-------IG~~~a~~l~~~G~~V~~~~ 45 (249)
T 3f9i_A 13 TGKTSLITGASS-G-------IGSAIARLLHKLGSKVIISG 45 (249)
T ss_dssp TTCEEEETTTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCCEEEEECCCC-h-------HHHHHHHHHHHCCCEEEEEc
Confidence 345666665543 2 35678888999999987655
No 380
>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A
Probab=23.85 E-value=69 Score=25.71 Aligned_cols=15 Identities=7% Similarity=0.355 Sum_probs=7.1
Q ss_pred HHHHHHHHHcCCeEE
Q 028256 40 IQLGKQLVERNIDLV 54 (211)
Q Consensus 40 ~~lG~~la~~g~~lv 54 (211)
+.+++.|+++|+.|+
T Consensus 22 ~~ia~~l~~~G~~V~ 36 (264)
T 2dtx_A 22 RAIAERFVDEGSKVI 36 (264)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 344444455555543
No 381
>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}
Probab=23.83 E-value=61 Score=25.72 Aligned_cols=19 Identities=16% Similarity=0.240 Sum_probs=11.6
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+.-+
T Consensus 22 G~aia~~l~~~G~~V~~~~ 40 (257)
T 3tl3_A 22 GLATTKRLLDAGAQVVVLD 40 (257)
T ss_dssp HHHHHHHHHHHTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3456666677777765443
No 382
>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2
Probab=23.83 E-value=70 Score=25.24 Aligned_cols=31 Identities=16% Similarity=0.096 Sum_probs=18.3
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 6 k~vlVTGas~-g-------iG~~ia~~l~~~G~~V~~~~ 36 (245)
T 1uls_A 6 KAVLITGAAH-G-------IGRATLELFAKEGARLVACD 36 (245)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665443 1 24566777777788776543
No 383
>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}
Probab=23.80 E-value=1.8e+02 Score=23.60 Aligned_cols=30 Identities=10% Similarity=0.277 Sum_probs=25.5
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|..|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (299)
T 3t7c_A 29 KVAFITGAAR-GQGRSHAITLAREGADIIAI 58 (299)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999976 99999999999999888876
No 384
>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}
Probab=23.78 E-value=2.5e+02 Score=22.37 Aligned_cols=30 Identities=20% Similarity=0.278 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|..|+.+
T Consensus 32 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 61 (271)
T 3v2g_A 32 KTAFVTGGSR-GIGAAIAKRLALEGAAVALT 61 (271)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 4578999975 99999999999999888776
No 385
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=23.74 E-value=2.8e+02 Score=23.68 Aligned_cols=31 Identities=23% Similarity=0.320 Sum_probs=12.4
Q ss_pred CeEEecCCCCChhHHH--HHHHHhcCCeEEEEe
Q 028256 51 IDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVI 81 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~ 81 (211)
..|+.|-|....-+++ ++.|.+.|..-+-++
T Consensus 101 vpViaGvg~~st~eai~la~~A~~~Gadavlv~ 133 (343)
T 2v9d_A 101 VPVLIGTGGTNARETIELSQHAQQAGADGIVVI 133 (343)
T ss_dssp SCEEEECCSSCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CcEEEecCCCCHHHHHHHHHHHHhcCCCEEEEC
Confidence 4444444433443333 333444444433333
No 386
>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}
Probab=23.70 E-value=70 Score=25.54 Aligned_cols=30 Identities=17% Similarity=0.160 Sum_probs=25.3
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 9 k~vlVTGas~-GIG~aia~~la~~G~~V~~~ 38 (259)
T 3edm_A 9 RTIVVAGAGR-DIGRACAIRFAQEGANVVLT 38 (259)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999976 99899999999999888776
No 387
>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}
Probab=23.68 E-value=69 Score=26.11 Aligned_cols=30 Identities=27% Similarity=0.375 Sum_probs=25.4
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (283)
T 3v8b_A 29 PVALITGAGS-GIGRATALALAADGVTVGAL 58 (283)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4578999975 99999999999999888776
No 388
>1vim_A Hypothetical protein AF1796; structural genomics, unknown function; 1.36A {Archaeoglobus fulgidus} SCOP: c.80.1.3
Probab=23.61 E-value=2.5e+02 Score=21.42 Aligned_cols=40 Identities=10% Similarity=0.055 Sum_probs=21.5
Q ss_pred HHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 8 QQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 8 ~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
..+.......-++|-|||. .. + + -.|..+...|.+-|..+
T Consensus 37 l~~~~~~i~~a~~I~i~G~-G~---S-~-~~A~~~~~~l~~~g~~~ 76 (200)
T 1vim_A 37 VGEMIKLIDSARSIFVIGA-GR---S-G-YIAKAFAMRLMHLGYTV 76 (200)
T ss_dssp HHHHHHHHHHSSCEEEECS-HH---H-H-HHHHHHHHHHHHTTCCE
T ss_pred HHHHHHHHhcCCEEEEEEe-cH---H-H-HHHHHHHHHHHhcCCeE
Confidence 3344444444567877743 21 1 2 25667777776666543
No 389
>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}
Probab=23.60 E-value=74 Score=25.75 Aligned_cols=32 Identities=25% Similarity=0.286 Sum_probs=25.7
Q ss_pred HcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 48 ERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 48 ~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+....|||||+. |+=.++++...+.|-+|+.+
T Consensus 23 ~~k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 54 (279)
T 3sju_A 23 RPQTAFVTGVSS-GIGLAVARTLAARGIAVYGC 54 (279)
T ss_dssp --CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 345788999975 99899999999999888776
No 390
>3m9w_A D-xylose-binding periplasmic protein; xylose binding protein, conformational changes, SUGA protein; 2.15A {Escherichia coli} PDB: 3m9x_A* 3ma0_A*
Probab=23.58 E-value=1.2e+02 Score=24.31 Aligned_cols=36 Identities=6% Similarity=-0.044 Sum_probs=22.7
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYG 56 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~G 56 (211)
++|+|+..+. .++-+.+....+-+.+.+.|+.++.-
T Consensus 3 ~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~~~ 38 (313)
T 3m9w_A 3 VKIGMAIDDL--RLERWQKDRDIFVKKAESLGAKVFVQ 38 (313)
T ss_dssp CEEEEEESCC--SSSTTHHHHHHHHHHHHHTSCEEEEE
T ss_pred cEEEEEeCCC--CChHHHHHHHHHHHHHHHcCCEEEEE
Confidence 5788886542 24555566666667777778776553
No 391
>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}
Probab=23.56 E-value=69 Score=25.92 Aligned_cols=31 Identities=19% Similarity=0.235 Sum_probs=19.6
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 30 k~vlVTGas~-g-------IG~aia~~L~~~G~~V~~~~ 60 (276)
T 2b4q_A 30 RIALVTGGSR-G-------IGQMIAQGLLEAGARVFICA 60 (276)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEC
T ss_pred CEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665443 2 34567778888888877554
No 392
>1to3_A Putative aldolase YIHT; beta-alpha barrel, structural genomics, PSI, protein structure initiative; 2.70A {Salmonella typhimurium} SCOP: c.1.10.1
Probab=23.49 E-value=3.3e+02 Score=22.81 Aligned_cols=104 Identities=11% Similarity=0.080 Sum_probs=53.7
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE---ecCCC-CC-------hhHHHHHHHHhcCCeEEEEecCcCCCC
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV---YGGGS-IG-------LMGLVSQAVYDGGRHVLGVIPKTLMPR 88 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv---~GGg~-~G-------lM~a~a~gA~~~gG~viGv~P~~~~~~ 88 (211)
++.||.++... ..+.++.+.++.+...+.|..++ +--|. .+ ....+++-+.+.|...+++-|... +.
T Consensus 126 ~vlv~~~~d~~-~~~~~~~i~~v~~~~~~~G~p~lv~~~~~g~~v~~~~~~~~~v~~aa~~a~~lGaD~iKv~~~~~-~~ 203 (304)
T 1to3_A 126 KLLVLWRSDED-AQQRLNMVKEFNELCHSNGLLSIIEPVVRPPRCGDKFDREQAIIDAAKELGDSGADLYKVEMPLY-GK 203 (304)
T ss_dssp EEEEEECTTSC-HHHHHHHHHHHHHHHHTTTCEEEEEEEECCCSSCSCCCHHHHHHHHHHHHTTSSCSEEEECCGGG-GC
T ss_pred EEEEEcCCCcc-HHHHHHHHHHHHHHHHHcCCcEEEEEECCCCccccCCChhHHHHHHHHHHHHcCCCEEEeCCCcC-CC
Confidence 45555554322 35566778888888888898752 21111 11 133445555667888888744321 10
Q ss_pred CCCCCCCceeeecCCHHHHHHHHHHhcCEE-EEecCCcCcHHHHHHHHH
Q 028256 89 EITGDTVGEVKAVSGMHQRKAEMARQADAF-IALPGGYGTLEELLEVIT 136 (211)
Q Consensus 89 e~~~~~~~~~~~~~~~~~Rk~~m~~~sDa~-IvlpGG~GTL~El~~~~~ 136 (211)
. -.+++.+.-+.....+..- |++-||+ +.+++.+.+.
T Consensus 204 -------g---~~~~~~~vv~~~~~~~~~P~Vv~aGG~-~~~~~~~~~~ 241 (304)
T 1to3_A 204 -------G---ARSDLLTASQRLNGHINMPWVILSSGV-DEKLFPRAVR 241 (304)
T ss_dssp -------S---CHHHHHHHHHHHHHTCCSCEEECCTTS-CTTTHHHHHH
T ss_pred -------C---CHHHHHHHHHhccccCCCCeEEEecCC-CHHHHHHHHH
Confidence 0 0011211111122226663 8888888 6666555443
No 393
>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*
Probab=23.48 E-value=69 Score=26.16 Aligned_cols=55 Identities=16% Similarity=0.106 Sum_probs=33.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCC-CChhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGS-IGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~-~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++|-|.|+++ + ..+.+++.|+++|+.|+..+-. ...-+.+.+...+.|+.+..+.
T Consensus 48 k~vlVTGas~-G-------IG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 103 (291)
T 3ijr_A 48 KNVLITGGDS-G-------IGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLP 103 (291)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEE
Confidence 4566665543 2 3467888899999998655433 1233444444455677777664
No 394
>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}
Probab=23.42 E-value=65 Score=26.11 Aligned_cols=30 Identities=17% Similarity=0.235 Sum_probs=25.3
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 5 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 34 (264)
T 3tfo_A 5 KVILITGASG-GIGEGIARELGVAGAKILLG 34 (264)
T ss_dssp CEEEESSTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEeCCcc-HHHHHHHHHHHHCCCEEEEE
Confidence 3568999975 99899999999999888776
No 395
>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2
Probab=23.39 E-value=62 Score=25.47 Aligned_cols=19 Identities=0% Similarity=0.004 Sum_probs=12.7
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 19 G~~ia~~l~~~G~~V~~~~ 37 (246)
T 2ag5_A 19 GQAAALAFAREGAKVIATD 37 (246)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEE
Confidence 4567777777788776543
No 396
>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0
Probab=23.29 E-value=71 Score=25.69 Aligned_cols=31 Identities=19% Similarity=0.223 Sum_probs=20.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+++-|-|+|+ + ..+++++.|+++|+.|+.-+
T Consensus 11 k~~lVTGas~-g-------IG~a~a~~l~~~G~~V~~~~ 41 (281)
T 3s55_A 11 KTALITGGAR-G-------MGRSHAVALAEAGADIAICD 41 (281)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCc-h-------HHHHHHHHHHHCCCeEEEEe
Confidence 4566665443 2 34678888899999987654
No 397
>8abp_A L-arabinose-binding protein; binding proteins; HET: GLA GAL; 1.49A {Escherichia coli} SCOP: c.93.1.1 PDB: 7abp_A* 6abp_A* 1abe_A* 1abf_A* 5abp_A* 1bap_A* 1apb_A* 9abp_A* 2wrz_A
Probab=23.25 E-value=1.3e+02 Score=23.74 Aligned_cols=38 Identities=13% Similarity=-0.046 Sum_probs=24.3
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
++-...|++|+.|-......+....+. ..+.|+++++.
T Consensus 53 l~~~~vdgiii~~~~~~~~~~~~~~~~-----~~~iPvV~~~~ 90 (306)
T 8abp_A 53 LAASGAKGFVICTPDPKLGSAIVAKAR-----GYDMKVIAVDD 90 (306)
T ss_dssp HHHTTCCEEEEECSCGGGHHHHHHHHH-----HTTCEEEEESS
T ss_pred HHHcCCCEEEEeCCCchhhHHHHHHHH-----HCCCcEEEeCC
Confidence 344568999999876655555443332 15689998873
No 398
>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0
Probab=23.23 E-value=72 Score=25.67 Aligned_cols=19 Identities=11% Similarity=0.253 Sum_probs=12.8
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 24 G~aia~~l~~~G~~V~~~~ 42 (271)
T 3tzq_B 24 GLETSRVLARAGARVVLAD 42 (271)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEc
Confidence 4567777777888776544
No 399
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=23.18 E-value=2.4e+02 Score=22.10 Aligned_cols=31 Identities=16% Similarity=0.108 Sum_probs=21.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 10 k~vlVTGas~-g-------iG~~ia~~l~~~G~~V~~~~ 40 (260)
T 2ae2_A 10 CTALVTGGSR-G-------IGYGIVEELASLGASVYTCS 40 (260)
T ss_dssp CEEEEESCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 5677776554 2 34678888899999987654
No 400
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=23.17 E-value=65 Score=25.57 Aligned_cols=54 Identities=13% Similarity=0.109 Sum_probs=29.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCCh--hHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGL--MGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~Gl--M~a~a~gA~~~gG~viGv 80 (211)
++|.|.|+|+ + ..+++++.|+++|+.|+..+-..-- .+.+.+...+.++.+..+
T Consensus 3 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~ 58 (258)
T 3a28_C 3 KVAMVTGGAQ-G-------IGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFV 58 (258)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEE
T ss_pred CEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEE
Confidence 4566665543 2 3467888888889988765432111 223333333345666555
No 401
>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*
Probab=23.17 E-value=73 Score=25.29 Aligned_cols=31 Identities=16% Similarity=0.265 Sum_probs=21.9
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+++ + ..+.+++.|+++|+.|+..+
T Consensus 8 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 38 (263)
T 3ai3_A 8 KVAVITGSSS-G-------IGLAIAEGFAKEGAHIVLVA 38 (263)
T ss_dssp CEEEEESCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEc
Confidence 5677776554 2 34678888899999987654
No 402
>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}
Probab=23.14 E-value=72 Score=25.70 Aligned_cols=42 Identities=12% Similarity=0.152 Sum_probs=21.9
Q ss_pred HHHHHHHHHHcCCeEEecCCCCC-------hhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIG-------LMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~G-------lM~a~a~gA~~~gG~viGv 80 (211)
.+++++.|+++|+.|+..+-..- -.+...+.....|+++..+
T Consensus 19 G~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 67 (274)
T 3e03_A 19 GLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLAL 67 (274)
T ss_dssp HHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEE
Confidence 45666777777777665442211 1334444444456665555
No 403
>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0
Probab=23.13 E-value=58 Score=25.56 Aligned_cols=30 Identities=20% Similarity=0.319 Sum_probs=24.8
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 15 k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 44 (249)
T 3f9i_A 15 KTSLITGASS-GIGSAIARLLHKLGSKVIIS 44 (249)
T ss_dssp CEEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 4568999875 99889999988999888876
No 404
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=23.10 E-value=72 Score=25.68 Aligned_cols=56 Identities=16% Similarity=0.144 Sum_probs=30.9
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCC-------------CCChhHHHHHHHHhcCCeEEEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGG-------------SIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg-------------~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
+++-|-|+++ + ..+++++.|+++|+.|+.-+- ...-.+.+.+...+.|+.+..+.-
T Consensus 16 k~~lVTGas~-g-------IG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (280)
T 3pgx_A 16 RVAFITGAAR-G-------QGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVL 84 (280)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEEC
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEc
Confidence 4555665443 2 346788888888998875431 111223334444455667666643
No 405
>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*
Probab=23.09 E-value=64 Score=25.58 Aligned_cols=28 Identities=11% Similarity=-0.177 Sum_probs=24.3
Q ss_pred eEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 52 DLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 52 ~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.|||||+. |+=.++++...+.|-+|+.+
T Consensus 4 vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 31 (254)
T 1zmt_A 4 AIVTNVKH-FGGMGSALRLSEAGHTVACH 31 (254)
T ss_dssp EEESSTTS-TTHHHHHHHHHHTTCEEEEC
T ss_pred EEEeCCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 68999975 99999999999999888776
No 406
>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2
Probab=23.08 E-value=2.1e+02 Score=22.54 Aligned_cols=61 Identities=11% Similarity=-0.011 Sum_probs=0.0
Q ss_pred hhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 12 AALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
|...-..++|-|.|+|+ -..+.+++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+
T Consensus 1 m~~~l~~k~vlVTGas~--------gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 61 (262)
T 1zem_A 1 MSKKFNGKVCLVTGAGG--------NIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSY 61 (262)
T ss_dssp --CTTTTCEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEE
T ss_pred CCcccCCCEEEEeCCCc--------HHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
No 407
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=23.05 E-value=1.1e+02 Score=21.74 Aligned_cols=29 Identities=17% Similarity=0.269 Sum_probs=18.9
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
++-+.|.|||.+.. .|...+..|.+.|+.
T Consensus 80 ~~~~~ivvyC~~G~--------rs~~aa~~L~~~G~~ 108 (129)
T 1tq1_A 80 GQSDNIIVGCQSGG--------RSIKATTDLLHAGFT 108 (129)
T ss_dssp CTTSSEEEEESSCS--------HHHHHHHHHHHHHCC
T ss_pred CCCCeEEEECCCCc--------HHHHHHHHHHHcCCC
Confidence 34567999997642 244566677777774
No 408
>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}
Probab=23.02 E-value=74 Score=25.26 Aligned_cols=31 Identities=16% Similarity=0.289 Sum_probs=20.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 13 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 43 (263)
T 3ak4_A 13 RKAIVTGGSK-G-------IGAAIARALDKAGATVAIAD 43 (263)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 4666775544 1 34568888888999887554
No 409
>4gx0_A TRKA domain protein; membrane protein, ION channel, ADP binding, NAD binding, MEM transport protein; HET: MAL GLC; 2.60A {Geobacter sulfurreducens} PDB: 4gx1_A* 4gx2_A* 4gx5_A 4gvl_A*
Probab=23.00 E-value=3.7e+02 Score=23.95 Aligned_cols=99 Identities=9% Similarity=0.005 Sum_probs=51.1
Q ss_pred HHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCC--HHHHHHHHHHhcCEE
Q 028256 41 QLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSG--MHQRKAEMARQADAF 118 (211)
Q Consensus 41 ~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~--~~~Rk~~m~~~sDa~ 118 (211)
.++..... ++.+|.|+|..| ..+++.-.+.|-.++.|-.+...- +.....+..+. ...=+..=++.+|++
T Consensus 341 ~~~~~~~~-~~viIiG~G~~G--~~la~~L~~~g~~v~vid~d~~~~-----~~~~~~i~gD~t~~~~L~~agi~~ad~v 412 (565)
T 4gx0_A 341 LIGEAPED-ELIFIIGHGRIG--CAAAAFLDRKPVPFILIDRQESPV-----CNDHVVVYGDATVGQTLRQAGIDRASGI 412 (565)
T ss_dssp ------CC-CCEEEECCSHHH--HHHHHHHHHTTCCEEEEESSCCSS-----CCSSCEEESCSSSSTHHHHHTTTSCSEE
T ss_pred HhcCCCCC-CCEEEECCCHHH--HHHHHHHHHCCCCEEEEECChHHH-----hhcCCEEEeCCCCHHHHHhcCccccCEE
Confidence 34443333 899999997744 566777777788888874332211 11223343322 122233446889999
Q ss_pred EEecCCcCcHHHHHHHHHHHHhCCCCCcEEEE
Q 028256 119 IALPGGYGTLEELLEVITWAQLGIHDKPVGLL 150 (211)
Q Consensus 119 IvlpGG~GTL~El~~~~~~~~lg~~~kPiill 150 (211)
|+..+.- -.-+..++...+++. +.+|+.-
T Consensus 413 i~~~~~d--~~ni~~~~~ak~l~~-~~~iiar 441 (565)
T 4gx0_A 413 IVTTNDD--STNIFLTLACRHLHS-HIRIVAR 441 (565)
T ss_dssp EECCSCH--HHHHHHHHHHHHHCS-SSEEEEE
T ss_pred EEECCCc--hHHHHHHHHHHHHCC-CCEEEEE
Confidence 9998873 222333344444443 2244443
No 410
>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}
Probab=22.96 E-value=64 Score=25.66 Aligned_cols=42 Identities=17% Similarity=0.215 Sum_probs=22.8
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+..+-..--.+.+.+.....|+.+..+
T Consensus 18 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 59 (260)
T 2qq5_A 18 GRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPV 59 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEE
Confidence 457888888899988765422111222222223336666555
No 411
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=22.94 E-value=2.1e+02 Score=22.42 Aligned_cols=54 Identities=17% Similarity=0.203 Sum_probs=29.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
++|-|.|+|+ + ..+.+++.|+++|+.|+.-+-..--.+.+.+...+.|+.+..+
T Consensus 3 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~ 56 (256)
T 1geg_A 3 KVALVTGAGQ-G-------IGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAV 56 (256)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred CEEEEECCCC-h-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEE
Confidence 4566665543 2 3467888889999998755422111222233333345555544
No 412
>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}
Probab=22.93 E-value=73 Score=25.67 Aligned_cols=32 Identities=22% Similarity=0.218 Sum_probs=21.4
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
.++|-|-|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 11 ~k~vlVTGas~-g-------IG~aia~~l~~~G~~V~~~~ 42 (281)
T 3svt_A 11 DRTYLVTGGGS-G-------IGKGVAAGLVAAGASVMIVG 42 (281)
T ss_dssp TCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEeCCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 45666766544 2 34578888888999887554
No 413
>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}
Probab=22.90 E-value=2.3e+02 Score=22.20 Aligned_cols=29 Identities=21% Similarity=0.346 Sum_probs=18.1
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (258)
T 3a28_C 4 VAMVTGGAQ-GIGRGISEKLAADGFDIAVA 32 (258)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHHTCEEEEE
T ss_pred EEEEeCCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 346666654 66666666666666666554
No 414
>1bvy_F Protein (cytochrome P450 BM-3); fatty acid monooxygenase, hemoprotein, flavoprotein, electron transfer, oxidoreductase; HET: HEM FMN; 2.03A {Bacillus megaterium} SCOP: c.23.5.1
Probab=22.87 E-value=33 Score=26.90 Aligned_cols=17 Identities=12% Similarity=0.214 Sum_probs=6.9
Q ss_pred HHHHHHHHHHHHHcCCe
Q 028256 36 QLAAIQLGKQLVERNID 52 (211)
Q Consensus 36 ~~~A~~lG~~la~~g~~ 52 (211)
...++++-+.|.+.|..
T Consensus 121 ~~a~~~l~~~L~~~Ga~ 137 (191)
T 1bvy_F 121 QKVPAFIDETLAAKGAE 137 (191)
T ss_dssp THHHHHHHHHHHTTTCC
T ss_pred hHHHHHHHHHHHHCCCe
Confidence 33344444444444433
No 415
>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}
Probab=22.87 E-value=73 Score=25.85 Aligned_cols=39 Identities=10% Similarity=0.113 Sum_probs=22.7
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-. -+.+.+-+.+.++.+..+
T Consensus 40 G~aia~~l~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 78 (277)
T 4dqx_A 40 GRATAELFAKNGAYVVVADVN---EDAAVRVANEIGSKAFGV 78 (277)
T ss_dssp HHHHHHHHHHTTCEEEEEESS---HHHHHHHHHHHCTTEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEE
Confidence 456788888888888765432 122333333446666655
No 416
>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}
Probab=22.86 E-value=63 Score=25.93 Aligned_cols=54 Identities=15% Similarity=0.115 Sum_probs=30.6
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCC----hhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIG----LMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~G----lM~a~a~gA~~~gG~viGv~ 81 (211)
+++-|.|+++ + ..+.+++.|+++|+.|+..+-. + -.+.+.+...+.|+++..+.
T Consensus 12 k~vlVTGas~-G-------IG~aia~~la~~G~~V~~~~r~-~~~~~~~~~~~~~~~~~~~~~~~~~ 69 (262)
T 3ksu_A 12 KVIVIAGGIK-N-------LGALTAKTFALESVNLVLHYHQ-AKDSDTANKLKDELEDQGAKVALYQ 69 (262)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHTTSSCEEEEEESC-GGGHHHHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEecC-ccCHHHHHHHHHHHHhcCCcEEEEE
Confidence 4555665443 2 3467888888999988764311 2 22333333444566766653
No 417
>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2
Probab=22.86 E-value=74 Score=25.30 Aligned_cols=31 Identities=13% Similarity=0.137 Sum_probs=21.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+..+
T Consensus 8 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 38 (267)
T 2gdz_A 8 KVALVTGAAQ-G-------IGRAFAEALLLKGAKVALVD 38 (267)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-c-------HHHHHHHHHHHCCCEEEEEE
Confidence 4677776554 1 34568888888999877544
No 418
>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*
Probab=22.85 E-value=75 Score=25.23 Aligned_cols=29 Identities=24% Similarity=0.267 Sum_probs=24.5
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 11 ~vlVTGas~-giG~~ia~~l~~~G~~V~~~ 39 (260)
T 2ae2_A 11 TALVTGGSR-GIGYGIVEELASLGASVYTC 39 (260)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 578999975 99889999988888888776
No 419
>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2
Probab=22.84 E-value=74 Score=25.57 Aligned_cols=30 Identities=30% Similarity=0.400 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 22 k~~lVTGas~-gIG~~ia~~l~~~G~~V~~~ 51 (267)
T 1vl8_A 22 RVALVTGGSR-GLGFGIAQGLAEAGCSVVVA 51 (267)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999975 99999999999999888776
No 420
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=22.77 E-value=2.4e+02 Score=23.35 Aligned_cols=67 Identities=15% Similarity=0.128 Sum_probs=37.1
Q ss_pred cceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 18 FKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 18 ~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
..-|.|.|++.... .++..+.. +.....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 39 v~gl~~~GttGE~~~Ls~~Er~~v~-~~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 110 (293)
T 1f6k_A 39 VDGLYVGGSTGENFMLSTEEKKEIF-RIAKDEAKDQIALIAQVGSVNLKEAVELGKYATELGYDCLSAVTPFY 110 (293)
T ss_dssp CSEEEESSGGGTGGGSCHHHHHHHH-HHHHHHHTTSSEEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CcEEEeCccccchhhCCHHHHHHHH-HHHHHHhCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44455554433321 23333333 33333344457788887766776665 5557777877766666544
No 421
>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*
Probab=22.77 E-value=95 Score=24.57 Aligned_cols=30 Identities=10% Similarity=0.118 Sum_probs=24.8
Q ss_pred CeEEecCCC-CChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGS-IGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~-~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. .|+=.++++...+.|-+|+.+
T Consensus 9 ~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~ 39 (266)
T 3oig_A 9 NIVVMGVANKRSIAWGIARSLHEAGARLIFT 39 (266)
T ss_dssp EEEEECCCSTTSHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEEcCCCCCcHHHHHHHHHHHCCCEEEEe
Confidence 468999872 289999999999999888776
No 422
>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2
Probab=22.75 E-value=75 Score=25.17 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=24.8
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 20 k~vlVTGas~-gIG~~~a~~l~~~G~~V~~~ 49 (249)
T 1o5i_A 20 KGVLVLAASR-GIGRAVADVLSQEGAEVTIC 49 (249)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999975 99889999988888888776
No 423
>3huu_A Transcription regulator like protein; PSI-II, NYSGXRC, LAC I, STR genomics, protein structure initiative; 1.95A {Staphylococcus haemolyticus}
Probab=22.72 E-value=2.9e+02 Score=21.88 Aligned_cols=46 Identities=9% Similarity=0.000 Sum_probs=31.6
Q ss_pred hhcCcceEEEEeCCCC---CCCHHHHHHHHHHHHHHHHcCCeEEecCCC
Q 028256 14 LKSRFKRVCVFCGSSP---GKSPSYQLAAIQLGKQLVERNIDLVYGGGS 59 (211)
Q Consensus 14 ~~~~~~~I~Vfggs~~---~~~~~~~~~A~~lG~~la~~g~~lv~GGg~ 59 (211)
...+.++|+|+..... ..++-+.+....+-+.+.++|+.++..-..
T Consensus 18 ~~~~~~~Igvi~~~~~~~~~~~~~~~~~~~gi~~~a~~~g~~~~~~~~~ 66 (305)
T 3huu_A 18 ITNKTLTIGLIQKSSAPEIRQNPFNSDVLNGINQACNVRGYSTRMTVSE 66 (305)
T ss_dssp ---CCCEEEEECSCCSHHHHTSHHHHHHHHHHHHHHHHHTCEEEECCCS
T ss_pred hhCCCCEEEEEeCCCccccccCcHHHHHHHHHHHHHHHCCCEEEEEeCC
Confidence 3456678999976521 236777777888888888999999876543
No 424
>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2
Probab=22.72 E-value=74 Score=25.60 Aligned_cols=31 Identities=23% Similarity=0.272 Sum_probs=20.7
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 10 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 40 (270)
T 1yde_A 10 KVVVVTGGGR-G-------IGAGIVRAFVNSGARVVICD 40 (270)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665543 1 34678888888999887554
No 425
>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}
Probab=22.69 E-value=61 Score=26.23 Aligned_cols=30 Identities=20% Similarity=0.414 Sum_probs=25.5
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 29 k~~lVTGas~-GIG~aia~~la~~G~~V~~~ 58 (270)
T 3ftp_A 29 QVAIVTGASR-GIGRAIALELARRGAMVIGT 58 (270)
T ss_dssp CEEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 4678999875 99999999999999888876
No 426
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=22.68 E-value=2.2e+02 Score=23.78 Aligned_cols=67 Identities=10% Similarity=0.098 Sum_probs=38.3
Q ss_pred cceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 18 FKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 18 ~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
..-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 47 v~gl~v~GtTGE~~~Ls~eEr~~vi~-~~~~~~~grvpViaGvg~~st~~ai~la~~A~~~Gadavlv~~P~y 118 (306)
T 1o5k_A 47 VNALIVLGTTGESPTVNEDEREKLVS-RTLEIVDGKIPVIVGAGTNSTEKTLKLVKQAEKLGANGVLVVTPYY 118 (306)
T ss_dssp CCEEEESSGGGTGGGCCHHHHHHHHH-HHHHHHTTSSCEEEECCCSCHHHHHHHHHHHHHHTCSEEEEECCCS
T ss_pred CCEEEeCccccchhhCCHHHHHHHHH-HHHHHhCCCCeEEEcCCCccHHHHHHHHHHHHhcCCCEEEECCCCC
Confidence 44566655443332 233333333 3333344457788888776777765 5667778887777766554
No 427
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.66 E-value=89 Score=25.94 Aligned_cols=56 Identities=20% Similarity=0.256 Sum_probs=31.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCC--eEEEEec
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGR--HVLGVIP 82 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG--~viGv~P 82 (211)
++|.|-|+|+ + ....+++.|+++|+.|+..+-...-.+.+.+.....+. .+..+..
T Consensus 9 k~vlVTGas~-g-------IG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~ 66 (319)
T 3ioy_A 9 RTAFVTGGAN-G-------VGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQL 66 (319)
T ss_dssp CEEEEETTTS-T-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEEC
T ss_pred CEEEEcCCch-H-------HHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 4677776554 2 35678889999999987655332222333333333343 5665543
No 428
>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.66 E-value=76 Score=25.17 Aligned_cols=31 Identities=16% Similarity=0.191 Sum_probs=20.2
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+.-+
T Consensus 7 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 37 (256)
T 2d1y_A 7 KGVLVTGGAR-G-------IGRAIAQAFAREGALVALCD 37 (256)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665543 2 34567788888898876544
No 429
>4amg_A Snogd; transferase, polyketide biosynthesis, GT1 family, nogalamyci; HET: MLY; 2.59A {Streptomyces nogalater} PDB: 4an4_A* 4amb_A*
Probab=22.56 E-value=53 Score=27.39 Aligned_cols=60 Identities=22% Similarity=0.279 Sum_probs=36.2
Q ss_pred hhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecC
Q 028256 14 LKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPK 83 (211)
Q Consensus 14 ~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~ 83 (211)
...+.|+|-++.... .-+..-.-.|++.|+++||.|..=..+ .. +...++|...+.+.|.
T Consensus 18 ~~~~~MRIL~~~~p~----~GHv~P~l~LA~~L~~rGh~Vt~~t~~-~~-----~~~~~~g~~~~~~~~~ 77 (400)
T 4amg_A 18 LYFQSMRALFITSPG----LSHILPTVPLAQALRALGHEVRYATGG-DI-----RAVAEAGLCAVDVSPG 77 (400)
T ss_dssp ---CCCEEEEECCSS----HHHHGGGHHHHHHHHHTTCEEEEEECS-ST-----HHHHTTTCEEEESSTT
T ss_pred CCCCCCeEEEECCCc----hhHHHHHHHHHHHHHHCCCEEEEEeCc-ch-----hhHHhcCCeeEecCCc
Confidence 344456777774332 335556778999999999988554433 22 2344567777766543
No 430
>3orq_A N5-carboxyaminoimidazole ribonucleotide synthetas; ATP-grAsp superfamily, ligase,biosynthetic protein; HET: MSE ADP; 2.23A {Staphylococcus aureus subsp} PDB: 3orr_A
Probab=22.56 E-value=1.6e+02 Score=25.01 Aligned_cols=29 Identities=28% Similarity=0.405 Sum_probs=16.2
Q ss_pred EEecCCCCChhHHHHHHHHhcCCeEEEEecC
Q 028256 53 LVYGGGSIGLMGLVSQAVYDGGRHVLGVIPK 83 (211)
Q Consensus 53 lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~ 83 (211)
+|.|||. +=..+++.|.+.|-.++.+-|.
T Consensus 16 lIlG~G~--lg~~la~aa~~lG~~viv~d~~ 44 (377)
T 3orq_A 16 GIIGGGQ--LGKMMAQSAQKMGYKVVVLDPS 44 (377)
T ss_dssp EEECCSH--HHHHHHHHHHHTTCEEEEEESC
T ss_pred EEECCCH--HHHHHHHHHHHCCCEEEEEECC
Confidence 3455543 3333566667777777766443
No 431
>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0
Probab=22.56 E-value=63 Score=25.22 Aligned_cols=19 Identities=11% Similarity=0.169 Sum_probs=12.4
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 27 G~~ia~~l~~~G~~V~~~~ 45 (247)
T 3i1j_A 27 GAAAARAYAAHGASVVLLG 45 (247)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3556677777777766544
No 432
>2v5h_A Acetylglutamate kinase; amino-acid biosynthesis, transcription regulation, transfera cyanobacteria, transcription; HET: NLG; 2.75A {Synechococcus elongatus} PDB: 2jj4_A*
Probab=22.55 E-value=1e+02 Score=26.18 Aligned_cols=48 Identities=15% Similarity=0.235 Sum_probs=27.1
Q ss_pred HHHHHhcCEEEEec------C-CcC-cHHHHHHHHHHHHhCCCCCcEEEEeCCccchh
Q 028256 109 AEMARQADAFIALP------G-GYG-TLEELLEVITWAQLGIHDKPVGLLNVDGYYNS 158 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp------G-G~G-TL~El~~~~~~~~lg~~~kPiill~~~g~~~~ 158 (211)
..+++.....|+-| | -+| +-|.++..++ ..++. .+-+++-+++|.|+.
T Consensus 181 ~~lL~~g~IpVi~~v~~~~~G~~~~i~~D~~Aa~lA-~~l~A-d~LiilTDVdGVy~~ 236 (321)
T 2v5h_A 181 EPLLERGYIPVISSVAADENGQSFNINADTVAGEIA-AALNA-EKLILLTDTRGILED 236 (321)
T ss_dssp HHHHHTTCEEEEESEEECTTSCEEECCHHHHHHHHH-HHTTC-SEEEEEESSSSCBSS
T ss_pred HHHHHCCCeEEEeCceECCCCCEEEeCHHHHHHHHH-HHcCC-CEEEEeeCCCceEcC
Confidence 34556665555543 1 135 6666665554 33332 455666688998863
No 433
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=22.54 E-value=1.3e+02 Score=20.45 Aligned_cols=29 Identities=17% Similarity=0.207 Sum_probs=19.7
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
++-+.|.|||.+.. .+...++.|.+.|+.
T Consensus 56 ~~~~~ivvyc~~g~--------rs~~a~~~L~~~G~~ 84 (108)
T 1gmx_A 56 DFDTPVMVMCYHGN--------SSKGAAQYLLQQGYD 84 (108)
T ss_dssp CTTSCEEEECSSSS--------HHHHHHHHHHHHTCS
T ss_pred CCCCCEEEEcCCCc--------hHHHHHHHHHHcCCc
Confidence 44567999986542 245667778888885
No 434
>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2
Probab=22.52 E-value=76 Score=25.48 Aligned_cols=31 Identities=19% Similarity=0.105 Sum_probs=19.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+++++.|+++|+.|+.-+
T Consensus 7 k~vlITGas~-g-------IG~aia~~l~~~G~~V~~~~ 37 (263)
T 2a4k_A 7 KTILVTGAAS-G-------IGRAALDLFAREGASLVAVD 37 (263)
T ss_dssp CEEEEESTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665543 1 24567777888888876554
No 435
>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*
Probab=22.49 E-value=62 Score=25.86 Aligned_cols=19 Identities=11% Similarity=0.118 Sum_probs=14.5
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+..+
T Consensus 24 G~~ia~~l~~~G~~V~~~~ 42 (276)
T 1mxh_A 24 GHSIAVRLHQQGFRVVVHY 42 (276)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567888888999887654
No 436
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=22.45 E-value=35 Score=24.40 Aligned_cols=29 Identities=17% Similarity=0.235 Sum_probs=14.3
Q ss_pred CCCcEEEEeCCccc-hhHHHHH-HHHHHcCC
Q 028256 143 HDKPVGLLNVDGYY-NSLLSFI-DKAVDEGF 171 (211)
Q Consensus 143 ~~kPiill~~~g~~-~~l~~~l-~~~~~~g~ 171 (211)
.+||+.++...|+. ..-...+ +.+.+.|+
T Consensus 78 ~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~ 108 (138)
T 5nul_A 78 SGKKVALFGSYGWGDGKWMRDFEERMNGYGC 108 (138)
T ss_dssp TTCEEEEEEEESSSCSHHHHHHHHHHHHTTC
T ss_pred CCCEEEEEEecCCCCChHHHHHHHHHHHCCC
Confidence 56788777654432 2333333 33444444
No 437
>3rpe_A MDAB, modulator of drug activity B; structural genomics, center for structural genomics of infec diseases, csgid, flavodoxin-like fold; HET: FAD; 1.10A {Yersinia pestis}
Probab=22.42 E-value=1.3e+02 Score=24.14 Aligned_cols=42 Identities=10% Similarity=-0.076 Sum_probs=23.1
Q ss_pred hhhhcCcceEEEEeCCCCC---CCHHHHHHHHHHHHHHHHcCCeE
Q 028256 12 AALKSRFKRVCVFCGSSPG---KSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 12 ~~~~~~~~~I~Vfggs~~~---~~~~~~~~A~~lG~~la~~g~~l 53 (211)
++..+.|++|.|+.||-.. .++.-...++++.+.+.+.|+.+
T Consensus 19 ~~~~~~M~kiLiI~gsp~~~~s~~s~n~~L~~~~~~~l~~~g~ev 63 (218)
T 3rpe_A 19 YFQSNAMSNVLIINAMKEFAHSKGALNLTLTNVAADFLRESGHQV 63 (218)
T ss_dssp C----CCCCEEEEECCCCBTTBCSHHHHHHHHHHHHHHHHTTCCE
T ss_pred ccccccCcceEEEEeCCCcccCCChHHHHHHHHHHHHHhhCCCEE
Confidence 4555667777777666542 23334456666666666667655
No 438
>3rot_A ABC sugar transporter, periplasmic sugar binding; nysgrc, PSI-biology, structural genomics; 1.91A {Legionella pneumophila subsp}
Probab=22.38 E-value=1.1e+02 Score=24.42 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=24.6
Q ss_pred HHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 110 EMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
++-...|++|+.|-....+.+....+.. .+.|+++++.
T Consensus 57 l~~~~vdgiii~~~~~~~~~~~~~~~~~-----~giPvV~~~~ 94 (297)
T 3rot_A 57 ALATYPSGIATTIPSDTAFSKSLQRANK-----LNIPVIAVDT 94 (297)
T ss_dssp HHHTCCSEEEECCCCSSTTHHHHHHHHH-----HTCCEEEESC
T ss_pred HHHcCCCEEEEeCCCHHHHHHHHHHHHH-----CCCCEEEEcC
Confidence 3445678888888776665665544431 3678888864
No 439
>1u0t_A Inorganic polyphosphate/ATP-NAD kinase; alpha-beta, beta sandwich, structural genomics, PSI, protein structure initiative; 2.30A {Mycobacterium tuberculosis} SCOP: e.52.1.1 PDB: 1u0r_A 1y3i_A* 1y3h_A
Probab=22.38 E-value=1.1e+02 Score=25.66 Aligned_cols=123 Identities=16% Similarity=0.210 Sum_probs=56.9
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCce
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGE 97 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~ 97 (211)
|++|+++.- .. ++...+.+.++.++|.++|+.++.=--. . ....+. ...+..+... ...+
T Consensus 4 m~ki~iI~n--~~-~~~~~~~~~~l~~~L~~~g~~v~~~~~~-~------~~~~~~-----~~~~~~~~~~---g~~~-- 63 (307)
T 1u0t_A 4 HRSVLLVVH--TG-RDEATETARRVEKVLGDNKIALRVLSAE-A------VDRGSL-----HLAPDDMRAM---GVEI-- 63 (307)
T ss_dssp -CEEEEEES--SS-GGGGSHHHHHHHHHHHTTTCEEEEEC----------------------------------------
T ss_pred CCEEEEEEe--CC-CHHHHHHHHHHHHHHHHCCCEEEEecch-h------hhhhcc-----cccccccccc---cccc--
Confidence 678999953 22 2334567889999999999987642211 0 000000 0001000000 0000
Q ss_pred eeecCCHHHHHHHHHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeCC--ccc-----hhHHHHHHHHHHcC
Q 028256 98 VKAVSGMHQRKAEMARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNVD--GYY-----NSLLSFIDKAVDEG 170 (211)
Q Consensus 98 ~~~~~~~~~Rk~~m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~~--g~~-----~~l~~~l~~~~~~g 170 (211)
....|.....+.+|.+|+ -||=||+.+....+.- .+.|++-+|.+ ||+ +++.+.++.+.+..
T Consensus 64 -----~~~~~~~~~~~~~d~vi~-~GGDGT~l~a~~~~~~-----~~~pvlgi~~G~~gfl~~~~~~~~~~~~~~i~~g~ 132 (307)
T 1u0t_A 64 -----EVVDADQHAADGCELVLV-LGGDGTFLRAAELARN-----ASIPVLGVNLGRIGFLAEAEAEAIDAVLEHVVAQD 132 (307)
T ss_dssp -----------------CCCEEE-EECHHHHHHHHHHHHH-----HTCCEEEEECSSCCSSCSEEGGGHHHHHHHHHHTC
T ss_pred -----cccccccccccCCCEEEE-EeCCHHHHHHHHHhcc-----CCCCEEEEeCCCCccCcccCHHHHHHHHHHHHcCC
Confidence 001122224456786555 5789999999876642 25787766643 443 33445555555543
Q ss_pred C
Q 028256 171 F 171 (211)
Q Consensus 171 ~ 171 (211)
+
T Consensus 133 ~ 133 (307)
T 1u0t_A 133 Y 133 (307)
T ss_dssp C
T ss_pred c
Confidence 3
No 440
>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0
Probab=22.33 E-value=63 Score=25.86 Aligned_cols=29 Identities=21% Similarity=0.231 Sum_probs=24.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 12 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 40 (262)
T 3pk0_A 12 SVVVTGGTK-GIGRGIATVFARAGANVAVA 40 (262)
T ss_dssp EEEETTCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 568999875 99999999988999888776
No 441
>3u7r_A NADPH-dependent FMN reductase; alpha/beta twisted open-sheet, lavoprotein, quinone reductas oxidoreductase; HET: MSE FNR 2PE; 1.40A {Paracoccus denitrificans}
Probab=22.31 E-value=73 Score=24.93 Aligned_cols=43 Identities=28% Similarity=0.668 Sum_probs=25.3
Q ss_pred HHHHHHHhcCEEEEe-c---CCc-CcHHHHHHHHHHHH--hC---CCCCcEEEEeC
Q 028256 107 RKAEMARQADAFIAL-P---GGY-GTLEELLEVITWAQ--LG---IHDKPVGLLNV 152 (211)
Q Consensus 107 Rk~~m~~~sDa~Ivl-p---GG~-GTL~El~~~~~~~~--lg---~~~kPiill~~ 152 (211)
+-.-.+..||++|+. | |++ |.|=-++ .|.. .+ ..+||+.++..
T Consensus 60 ~l~~~i~~aD~~ii~tPeYn~s~pg~LKn~i---Dwlsr~~~~~~~~gKpv~~v~~ 112 (190)
T 3u7r_A 60 RLKDRIEHSDAVLAITPEYNRSYPGMIKNAI---DWATRPYGQNSWKGKPAAVIGT 112 (190)
T ss_dssp HHHHHHHTSSEEEEECCCBTTBCCHHHHHHH---HHHHCSTTCCTTTTCEEEEEEE
T ss_pred HHHHHHHhCCcEEEechhhcccCCHHHHHHH---HHhcccccCCccCCCEEEEEEe
Confidence 444567889997765 4 343 4444333 3432 12 36799999864
No 442
>3q9l_A Septum site-determining protein MIND; ATPase, bacterial cell division inhibitor, MINC, MINE, cell hydrolase; HET: ATP; 2.34A {Escherichia coli} PDB: 3r9i_A* 3r9j_A*
Probab=22.30 E-value=1.4e+02 Score=23.29 Aligned_cols=34 Identities=12% Similarity=0.205 Sum_probs=24.1
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
+.|+|+ |...+.... ..|..|+..||++|+.++.
T Consensus 3 ~vi~v~-s~kgGvGKT--t~a~~LA~~la~~g~~Vll 36 (260)
T 3q9l_A 3 RIIVVT-SGKGGVGKT--TSSAAIATGLAQKGKKTVV 36 (260)
T ss_dssp EEEEEE-CSSTTSSHH--HHHHHHHHHHHHTTCCEEE
T ss_pred eEEEEE-CCCCCCcHH--HHHHHHHHHHHhCCCcEEE
Confidence 456666 455555543 5688999999999987644
No 443
>1sqs_A Conserved hypothetical protein; structural genomics, alpha beta protein, PSI, protein struct initiative; HET: TLA; 1.50A {Streptococcus pneumoniae} SCOP: c.23.5.5 PDB: 2oys_A*
Probab=22.30 E-value=1.4e+02 Score=23.54 Aligned_cols=35 Identities=14% Similarity=0.342 Sum_probs=20.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHc-CCeE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVER-NIDL 53 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~-g~~l 53 (211)
|++|.|+.||... ++.-.+.|+.+.+.+.+. |+.+
T Consensus 1 MmkIliI~gS~r~-~s~T~~la~~i~~~l~~~~g~~v 36 (242)
T 1sqs_A 1 MNKIFIYAGVRNH-NSKTLEYTKRLSSIISSRNNVDI 36 (242)
T ss_dssp CCEEEEEECCCCT-TCHHHHHHHHHHHHHHHHSCCEE
T ss_pred CCeEEEEECCCCC-CChHHHHHHHHHHHHHHhcCCeE
Confidence 3455565566543 233346677777777766 6654
No 444
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=22.28 E-value=2.6e+02 Score=23.05 Aligned_cols=68 Identities=16% Similarity=0.095 Sum_probs=40.5
Q ss_pred CcceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 17 RFKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
...-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 35 Gv~gl~~~GttGE~~~Ls~~Er~~v~~-~~~~~~~gr~pvi~Gvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 107 (291)
T 3a5f_A 35 KTDAIIVCGTTGEATTMTETERKETIK-FVIDKVNKRIPVIAGTGSNNTAASIAMSKWAESIGVDGLLVITPYY 107 (291)
T ss_dssp TCCEEEESSGGGTGGGSCHHHHHHHHH-HHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCEEEECccccChhhCCHHHHHHHHH-HHHHHhCCCCcEEEeCCcccHHHHHHHHHHHHhcCCCEEEEcCCCC
Confidence 344566665444332 234433333 3333344457888888876787776 5667888988777766554
No 445
>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A
Probab=22.26 E-value=2e+02 Score=22.95 Aligned_cols=70 Identities=16% Similarity=0.173 Sum_probs=0.0
Q ss_pred CcchHHHHHHHhhhhcCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 1 METQQQQQQAAAALKSRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 1 ~~~~~~~~~~~~~~~~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
++.-.+....+..+.+...+++++-|++.+ ..+.+++.|+++|+.|+.-+-. -+.+.+-+.+.++.+..+
T Consensus 9 ~~~~~~~~~g~~~m~~l~gk~vlVTGas~g-------IG~aia~~la~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 78 (266)
T 3grp_A 9 MGTLEAQTQGPGSMFKLTGRKALVTGATGG-------IGEAIARCFHAQGAIVGLHGTR---EDKLKEIAADLGKDVFVF 78 (266)
T ss_dssp ------------CTTCCTTCEEEESSTTSH-------HHHHHHHHHHHTTCEEEEEESC---HHHHHHHHHHHCSSEEEE
T ss_pred cccccCCCCCCcchhccCCCEEEEeCCCcH-------HHHHHHHHHHHCCCEEEEEeCC---HHHHHHHHHHhCCceEEE
No 446
>3gbv_A Putative LACI-family transcriptional regulator; NYSGXRC, PSI-II, 11231J, structur genomics, protein structure initiative; 2.20A {Bacteroides fragilis}
Probab=22.25 E-value=93 Score=24.56 Aligned_cols=37 Identities=11% Similarity=0.102 Sum_probs=23.3
Q ss_pred HHHhcCEEEEecCCcCcHHHHHHHHHHHHhCCCCCcEEEEeC
Q 028256 111 MARQADAFIALPGGYGTLEELLEVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 111 m~~~sDa~IvlpGG~GTL~El~~~~~~~~lg~~~kPiill~~ 152 (211)
.-...|++|+.|-......+..+.+.. .+.|+++++.
T Consensus 66 ~~~~vdgiii~~~~~~~~~~~~~~~~~-----~~iPvV~~~~ 102 (304)
T 3gbv_A 66 IEEQPDGVMFAPTVPQYTKGFTDALNE-----LGIPYIYIDS 102 (304)
T ss_dssp HTTCCSEEEECCSSGGGTHHHHHHHHH-----HTCCEEEESS
T ss_pred HhcCCCEEEECCCChHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 345679999888765444555444331 3678888865
No 447
>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}
Probab=22.23 E-value=2.6e+02 Score=21.52 Aligned_cols=56 Identities=13% Similarity=0.030 Sum_probs=0.0
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe-cCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY-GGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~-GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
+.++|-|.|+++ -..+++++.|+++|+.++. .+....-.+...+...+.++.+.-+
T Consensus 6 ~~k~vlITGas~--------gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 62 (255)
T 3icc_A 6 KGKVALVTGASR--------GIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSI 62 (255)
T ss_dssp TTCEEEETTCSS--------HHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEE
T ss_pred CCCEEEEECCCC--------hHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEE
No 448
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=22.21 E-value=72 Score=23.17 Aligned_cols=29 Identities=34% Similarity=0.452 Sum_probs=19.3
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNID 52 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~ 52 (211)
++-+.|.|||.+.. . +...+..|.+.||.
T Consensus 80 ~~~~~ivvyC~~G~--r------S~~aa~~L~~~G~~ 108 (137)
T 1qxn_A 80 DPEKPVVVFCKTAA--R------AALAGKTLREYGFK 108 (137)
T ss_dssp CTTSCEEEECCSSS--C------HHHHHHHHHHHTCS
T ss_pred CCCCeEEEEcCCCc--H------HHHHHHHHHHcCCc
Confidence 45567999997653 1 34466677778884
No 449
>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*
Probab=22.19 E-value=71 Score=25.80 Aligned_cols=31 Identities=16% Similarity=0.288 Sum_probs=20.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+++-|.|+++ + ..+.+++.|+++|+.|+..+
T Consensus 28 k~~lVTGas~-G-------IG~aia~~l~~~G~~V~~~~ 58 (277)
T 4fc7_A 28 KVAFITGGGS-G-------IGFRIAEIFMRHGCHTVIAS 58 (277)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHTTTCEEEEEE
T ss_pred CEEEEeCCCc-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 4555665443 2 34678888888999887655
No 450
>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}
Probab=22.19 E-value=64 Score=25.89 Aligned_cols=19 Identities=5% Similarity=0.015 Sum_probs=12.4
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
...+++.|+++|+.|+.-+
T Consensus 18 G~~~a~~l~~~G~~V~~~~ 36 (281)
T 3m1a_A 18 GRAIAEAAVAAGDTVIGTA 36 (281)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 3456677777787776444
No 451
>2ap9_A NAG kinase, acetylglutamate kinase, AGK; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.80A {Mycobacterium tuberculosis} SCOP: c.73.1.2
Probab=22.18 E-value=98 Score=25.74 Aligned_cols=47 Identities=17% Similarity=0.336 Sum_probs=24.3
Q ss_pred HHHHHhcCEEEEec---CCcC-----cHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 109 AEMARQADAFIALP---GGYG-----TLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 109 ~~m~~~sDa~Ivlp---GG~G-----TL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
..+++.....|+-| ...| +-|.+...++ ..++. .+=+++-+++|.|+
T Consensus 163 ~~lL~~g~IpVv~~v~~~~~G~~~~l~~D~~Aa~lA-~~l~A-d~liilTDVdGV~~ 217 (299)
T 2ap9_A 163 LDLVAAGRIPVVSTLAPDADGVVHNINADTAAAAVA-EALGA-EKLLMLTDIDGLYT 217 (299)
T ss_dssp HHHHHTTCEEEEESEEECTTCCEEEECHHHHHHHHH-HHTTC-SEEEEEESSSSEET
T ss_pred HHHHhCCCeEEECCeeECCCCCEEEECHHHHHHHHH-HHcCC-CEEEEEeCChhhhc
Confidence 34556555545443 0222 4455554443 33432 45556668889886
No 452
>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}
Probab=22.16 E-value=78 Score=25.10 Aligned_cols=31 Identities=26% Similarity=0.255 Sum_probs=21.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 8 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 38 (260)
T 2z1n_A 8 KLAVVTAGSS-G-------LGFASALELARNGARLLLFS 38 (260)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665544 2 34678888888999987554
No 453
>1z9d_A Uridylate kinase, UK, UMP kinase; structural genomics, protein structure initiative, NYSGXRC, PYRH, putative uridylate kinase, PSI; 2.80A {Streptococcus pyogenes} SCOP: c.73.1.3
Probab=22.16 E-value=3e+02 Score=21.94 Aligned_cols=47 Identities=19% Similarity=0.190 Sum_probs=26.9
Q ss_pred HHHHHhcCEEEEecCC---cCcHHHHHHHHHHHHhCCCCCcEEEE-eCCccch
Q 028256 109 AEMARQADAFIALPGG---YGTLEELLEVITWAQLGIHDKPVGLL-NVDGYYN 157 (211)
Q Consensus 109 ~~m~~~sDa~IvlpGG---~GTL~El~~~~~~~~lg~~~kPiill-~~~g~~~ 157 (211)
..+++.....|+-|+. .++-|.++..++ ..++. .+-+++- +++|.|+
T Consensus 121 ~~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA-~~l~A-d~LiilT~DVdGvy~ 171 (252)
T 1z9d_A 121 LRHLEKNRIVVFGAGIGSPYFSTDTTAALRA-AEIEA-DAILMAKNGVDGVYN 171 (252)
T ss_dssp HHHHHTTCEEEEESTTSCTTCCHHHHHHHHH-HHTTC-SEEEEEESSCCSCBS
T ss_pred HHHHhCCCEEEEeCCcCCCCCChHHHHHHHH-HhcCC-CEEEEecCCCCeeeC
Confidence 3444544444444321 567777776554 33332 4667777 8888885
No 454
>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}
Probab=22.14 E-value=2.1e+02 Score=23.48 Aligned_cols=28 Identities=18% Similarity=0.177 Sum_probs=17.9
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeE-EEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHV-LGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~v-iGv 80 (211)
..+|+|+| |+=..+..-|+..|..+ +.+
T Consensus 163 ~VlV~GaG--~vG~~aiq~ak~~G~~~vi~~ 191 (346)
T 4a2c_A 163 NVIIIGAG--TIGLLAIQCAVALGAKSVTAI 191 (346)
T ss_dssp EEEEECCS--HHHHHHHHHHHHTTCSEEEEE
T ss_pred EEEEECCC--CcchHHHHHHHHcCCcEEEEE
Confidence 34577765 44455667788888765 444
No 455
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=22.13 E-value=79 Score=24.94 Aligned_cols=32 Identities=16% Similarity=0.100 Sum_probs=20.7
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
.++|-|.|+++ + ..+++++.|+++|+.|+.-+
T Consensus 9 ~k~vlITGas~-g-------IG~~~a~~l~~~G~~V~~~~ 40 (261)
T 3n74_A 9 GKVALITGAGS-G-------FGEGMAKRFAKGGAKVVIVD 40 (261)
T ss_dssp TCEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCc-h-------HHHHHHHHHHHCCCEEEEEc
Confidence 34566665543 2 34677888888898877655
No 456
>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*
Probab=22.12 E-value=64 Score=26.07 Aligned_cols=42 Identities=14% Similarity=0.123 Sum_probs=22.1
Q ss_pred HHHHHHHHHHcCCeEEecCCCC-ChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSI-GLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~-GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+..+... ..-+.+.+...+.|+.+..+
T Consensus 42 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~ 84 (283)
T 1g0o_A 42 GREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACV 84 (283)
T ss_dssp HHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEE
Confidence 4567777788888876544321 11233333333445555544
No 457
>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...
Probab=22.09 E-value=67 Score=25.94 Aligned_cols=19 Identities=11% Similarity=0.165 Sum_probs=12.6
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+++++.|+++|+.|+..+
T Consensus 41 G~~la~~l~~~G~~V~~~~ 59 (286)
T 1xu9_A 41 GREMAYHLAKMGAHVVVTA 59 (286)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEE
Confidence 4566677777788766544
No 458
>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}
Probab=22.09 E-value=77 Score=25.67 Aligned_cols=51 Identities=14% Similarity=0.081 Sum_probs=28.2
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
++|.|-|+++ + ..+++++.|+++|+.|+..+-. .+...+.+.+.++.+..+
T Consensus 17 k~vlVTGas~-g-------IG~~~a~~L~~~G~~V~~~~r~---~~~~~~~~~~~~~~~~~~ 67 (291)
T 3rd5_A 17 RTVVITGANS-G-------LGAVTARELARRGATVIMAVRD---TRKGEAAARTMAGQVEVR 67 (291)
T ss_dssp CEEEEECCSS-H-------HHHHHHHHHHHTTCEEEEEESC---HHHHHHHHTTSSSEEEEE
T ss_pred CEEEEeCCCC-h-------HHHHHHHHHHHCCCEEEEEECC---HHHHHHHHHHhcCCeeEE
Confidence 4566665543 2 3467888888899988765532 122222233345555554
No 459
>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}
Probab=22.09 E-value=77 Score=25.67 Aligned_cols=31 Identities=23% Similarity=0.277 Sum_probs=25.8
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
...|||||+. |+=.++++...+.|.+|+.+-
T Consensus 33 k~~lVTGas~-GIG~aia~~la~~G~~V~~~~ 63 (276)
T 3r1i_A 33 KRALITGAST-GIGKKVALAYAEAGAQVAVAA 63 (276)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-HHHHHHHHHHHHCCCEEEEEe
Confidence 3678999975 998999999999998888763
No 460
>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}
Probab=22.08 E-value=2.2e+02 Score=23.41 Aligned_cols=29 Identities=21% Similarity=0.244 Sum_probs=19.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-.|+.+
T Consensus 10 ~vlVTGas~-gIG~~la~~l~~~G~~Vv~~ 38 (319)
T 3ioy_A 10 TAFVTGGAN-GVGIGLVRQLLNQGCKVAIA 38 (319)
T ss_dssp EEEEETTTS-THHHHHHHHHHHTTCEEEEE
T ss_pred EEEEcCCch-HHHHHHHHHHHHCCCEEEEE
Confidence 456777764 77777777777777666665
No 461
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=22.07 E-value=1.2e+02 Score=23.94 Aligned_cols=19 Identities=11% Similarity=0.270 Sum_probs=13.6
Q ss_pred HHHHHHHHHHcCCeEEecC
Q 028256 39 AIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GG 57 (211)
.+.+++.|+++|+.|+.-+
T Consensus 19 G~aia~~l~~~G~~V~~~~ 37 (257)
T 3imf_A 19 GKGMATRFAKEGARVVITG 37 (257)
T ss_dssp HHHHHHHHHHTTCEEEEEE
T ss_pred HHHHHHHHHHCCCEEEEEe
Confidence 4567777888888876544
No 462
>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}
Probab=22.06 E-value=65 Score=25.66 Aligned_cols=29 Identities=21% Similarity=0.316 Sum_probs=24.6
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 8 ~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 36 (257)
T 3imf_A 8 VVIITGGSS-GMGKGMATRFAKEGARVVIT 36 (257)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 568999975 99889999999999888776
No 463
>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*
Probab=22.05 E-value=68 Score=25.42 Aligned_cols=42 Identities=12% Similarity=0.205 Sum_probs=22.5
Q ss_pred HHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 39 AIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 39 A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
.+.+++.|+++|+.|+.-+-..--.+.+.+...+.|+.+..+
T Consensus 27 G~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~ 68 (260)
T 2zat_A 27 GLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGT 68 (260)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEE
Confidence 456888888899988755432111122222223345565555
No 464
>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*
Probab=21.96 E-value=82 Score=24.40 Aligned_cols=29 Identities=14% Similarity=0.248 Sum_probs=24.3
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-.|+.+
T Consensus 4 ~vlITGas~-gIG~~ia~~l~~~G~~V~~~ 32 (235)
T 3l77_A 4 VAVITGASR-GIGEAIARALARDGYALALG 32 (235)
T ss_dssp EEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 468999975 99889999999999887776
No 465
>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A
Probab=21.94 E-value=68 Score=25.74 Aligned_cols=30 Identities=27% Similarity=0.327 Sum_probs=25.3
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|.+|+.+
T Consensus 19 k~~lVTGas~-gIG~aia~~l~~~G~~V~~~ 48 (270)
T 3is3_A 19 KVALVTGSGR-GIGAAVAVHLGRLGAKVVVN 48 (270)
T ss_dssp CEEEESCTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999975 99999999999999888775
No 466
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=21.93 E-value=1.9e+02 Score=20.28 Aligned_cols=32 Identities=9% Similarity=-0.038 Sum_probs=20.2
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
.+-+.|.|||.+... + .|...+..|.+.|+.+
T Consensus 69 ~~~~~ivvyC~~g~r--~----~s~~a~~~L~~~G~~v 100 (124)
T 3flh_A 69 DPAKTYVVYDWTGGT--T----LGKTALLVLLSAGFEA 100 (124)
T ss_dssp CTTSEEEEECSSSSC--S----HHHHHHHHHHHHTCEE
T ss_pred CCCCeEEEEeCCCCc--h----HHHHHHHHHHHcCCeE
Confidence 345678899876542 1 1345666777788873
No 467
>2hy7_A Glucuronosyltransferase GUMK; glycosyltransferases, xanthan, membrane-associated proteins; 1.90A {Xanthomonas campestris} PDB: 2q6v_A* 3cv3_A* 3cuy_A*
Probab=21.92 E-value=99 Score=26.45 Aligned_cols=41 Identities=15% Similarity=-0.023 Sum_probs=23.6
Q ss_pred HHHHHHHHhcCEEEEe--cCCcCc-HHHHH----HHHHHHHhCCCCCcEEEEeC
Q 028256 106 QRKAEMARQADAFIAL--PGGYGT-LEELL----EVITWAQLGIHDKPVGLLNV 152 (211)
Q Consensus 106 ~Rk~~m~~~sDa~Ivl--pGG~GT-L~El~----~~~~~~~lg~~~kPiill~~ 152 (211)
+....+...||++|+- ..|+|. +-|.+ |-++ .++|||..+.
T Consensus 276 ~~l~~~~~~adv~v~ps~~E~~~~~~lEAm~Kl~eYla------~G~PVIas~~ 323 (406)
T 2hy7_A 276 AQTIGYIKHARFGIAPYASEQVPVYLADSSMKLLQYDF------FGLPAVCPNA 323 (406)
T ss_dssp HHHHHHHHTCSEEECCBSCSCCCTTHHHHCHHHHHHHH------HTCCEEEEGG
T ss_pred HHHHHHHHhcCEEEECCCcccCchHHHHHHHHHHHHhh------CCCcEEEehh
Confidence 4455677889987753 244444 33322 1114 5899998653
No 468
>1xjc_A MOBB protein homolog; structural genomics, midwest center for structural GEN PSI, protein structure initiative, MCSG; 2.10A {Geobacillus stearothermophilus} SCOP: c.37.1.10
Probab=21.88 E-value=1.5e+02 Score=22.63 Aligned_cols=34 Identities=9% Similarity=-0.060 Sum_probs=22.7
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeE
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDL 53 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~l 53 (211)
++|+.|+|.|.|..+ . ...+..|.+.|.++|+.+
T Consensus 2 ~~~~~i~i~G~sGsG--K--TTl~~~L~~~l~~~g~~v 35 (169)
T 1xjc_A 2 NAMNVWQVVGYKHSG--K--TTLMEKWVAAAVREGWRV 35 (169)
T ss_dssp --CCEEEEECCTTSS--H--HHHHHHHHHHHHHTTCCE
T ss_pred CCCEEEEEECCCCCC--H--HHHHHHHHHhhHhcCCee
Confidence 357778888766554 2 245678888998888754
No 469
>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*
Probab=21.87 E-value=1.6e+02 Score=24.10 Aligned_cols=31 Identities=13% Similarity=-0.064 Sum_probs=22.1
Q ss_pred CcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 17 RFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
.+++|.|.|++.. ....|.+.|.++|+.|+.
T Consensus 24 ~~~~vlVtGatG~--------iG~~l~~~L~~~g~~V~~ 54 (351)
T 3ruf_A 24 SPKTWLITGVAGF--------IGSNLLEKLLKLNQVVIG 54 (351)
T ss_dssp SCCEEEEETTTSH--------HHHHHHHHHHHTTCEEEE
T ss_pred CCCeEEEECCCcH--------HHHHHHHHHHHCCCEEEE
Confidence 4578899976552 346788888888988754
No 470
>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2
Probab=21.86 E-value=67 Score=25.03 Aligned_cols=29 Identities=28% Similarity=0.419 Sum_probs=19.5
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 5 ~vlITGas~-gIG~~~a~~l~~~G~~V~~~ 33 (236)
T 1ooe_A 5 KVIVYGGKG-ALGSAILEFFKKNGYTVLNI 33 (236)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTEEEEEE
T ss_pred EEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 356777764 77777777777776666655
No 471
>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}
Probab=21.80 E-value=67 Score=24.44 Aligned_cols=16 Identities=6% Similarity=0.065 Sum_probs=8.9
Q ss_pred HHHHHHHHHcCCeEEe
Q 028256 40 IQLGKQLVERNIDLVY 55 (211)
Q Consensus 40 ~~lG~~la~~g~~lv~ 55 (211)
..+.+.|+++|+.|+.
T Consensus 14 ~~l~~~L~~~g~~V~~ 29 (224)
T 3h2s_A 14 SAIVAEARRRGHEVLA 29 (224)
T ss_dssp HHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHCCCEEEE
Confidence 4555555566665543
No 472
>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*
Probab=21.77 E-value=79 Score=25.48 Aligned_cols=55 Identities=11% Similarity=0.146 Sum_probs=30.5
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEEe
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGVI 81 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~ 81 (211)
++|.|.|+|+ + ..+.+++.|+++|+.|+.-+-...-.+.+.+...+.|+.+..+.
T Consensus 23 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~ 77 (277)
T 2rhc_B 23 EVALVTGATS-G-------IGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRT 77 (277)
T ss_dssp CEEEEETCSS-H-------HHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEE
T ss_pred CEEEEECCCC-H-------HHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEE
Confidence 4566665543 2 34678888899999987654321112222333333466665553
No 473
>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}
Probab=21.73 E-value=74 Score=23.99 Aligned_cols=30 Identities=7% Similarity=0.077 Sum_probs=18.2
Q ss_pred eEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 20 RVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 20 ~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
+|.|.|++.. ....+.+.|+++|+.|+.-.
T Consensus 2 kvlVtGatG~--------iG~~l~~~L~~~g~~V~~~~ 31 (221)
T 3ew7_A 2 KIGIIGATGR--------AGSRILEEAKNRGHEVTAIV 31 (221)
T ss_dssp EEEEETTTSH--------HHHHHHHHHHHTTCEEEEEE
T ss_pred eEEEEcCCch--------hHHHHHHHHHhCCCEEEEEE
Confidence 5777765442 24566677777777765443
No 474
>3of5_A Dethiobiotin synthetase; structural genomics, center for structural genomics of infec diseases, csgid, ligase; 1.52A {Francisella tularensis subsp}
Probab=21.72 E-value=1.3e+02 Score=24.00 Aligned_cols=37 Identities=14% Similarity=0.221 Sum_probs=26.8
Q ss_pred cCcceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEe
Q 028256 16 SRFKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVY 55 (211)
Q Consensus 16 ~~~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~ 55 (211)
++|+.|-|.+ +..+....+ .+-.|.+.|+++|+.+.+
T Consensus 2 ~~mk~i~Itg-t~t~vGKT~--vt~~L~~~l~~~G~~V~~ 38 (228)
T 3of5_A 2 NAMKKFFIIG-TDTEVGKTY--ISTKLIEVCEHQNIKSLC 38 (228)
T ss_dssp TTCEEEEEEE-SSSSSCHHH--HHHHHHHHHHHTTCCEEE
T ss_pred CCCcEEEEEe-CCCCCCHHH--HHHHHHHHHHHCCCeeEE
Confidence 5678888874 555556655 456799999999998743
No 475
>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}
Probab=21.70 E-value=82 Score=24.70 Aligned_cols=30 Identities=23% Similarity=0.399 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 k~vlITGas~-giG~~~a~~l~~~G~~V~~~ 39 (253)
T 3qiv_A 10 KVGIVTGSGG-GIGQAYAEALAREGAAVVVA 39 (253)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 3568999975 99999999999999888776
No 476
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=21.67 E-value=90 Score=25.85 Aligned_cols=54 Identities=15% Similarity=0.145 Sum_probs=33.5
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
|++|.++.... .-+......|++.|.++||.|..=.++ ...+.....|-.++.+
T Consensus 4 M~~il~~~~~~----~Ghv~~~~~La~~L~~~GheV~v~~~~-----~~~~~~~~~G~~~~~~ 57 (402)
T 3ia7_A 4 QRHILFANVQG----HGHVYPSLGLVSELARRGHRITYVTTP-----LFADEVKAAGAEVVLY 57 (402)
T ss_dssp CCEEEEECCSS----HHHHHHHHHHHHHHHHTTCEEEEEECH-----HHHHHHHHTTCEEEEC
T ss_pred CCEEEEEeCCC----CcccccHHHHHHHHHhCCCEEEEEcCH-----HHHHHHHHcCCEEEec
Confidence 55788775432 334566788999999999998665432 2223334456555554
No 477
>2c20_A UDP-glucose 4-epimerase; carbohydrate metabolism, galactose metabolism, isomerase, NAD, spine; HET: NAD; 2.7A {Bacillus anthracis}
Probab=21.65 E-value=1e+02 Score=24.98 Aligned_cols=29 Identities=17% Similarity=0.357 Sum_probs=0.0
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
|++|.|.|++. -....+.+.|.++|+.|+
T Consensus 1 M~~ilVtGatG--------~iG~~l~~~L~~~g~~V~ 29 (330)
T 2c20_A 1 MNSILICGGAG--------YIGSHAVKKLVDEGLSVV 29 (330)
T ss_dssp -CEEEEETTTS--------HHHHHHHHHHHHTTCEEE
T ss_pred CCEEEEECCCc--------HHHHHHHHHHHhCCCEEE
No 478
>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0
Probab=21.63 E-value=3e+02 Score=21.78 Aligned_cols=30 Identities=10% Similarity=0.228 Sum_probs=25.6
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 16 k~~lVTGas~-gIG~a~a~~la~~G~~V~~~ 45 (280)
T 3pgx_A 16 RVAFITGAAR-GQGRSHAVRLAAEGADIIAC 45 (280)
T ss_dssp CEEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-HHHHHHHHHHHHCCCEEEEE
Confidence 3578999976 99899999999999888876
No 479
>3e15_A Glucose-6-phosphate 1-dehydrogenase; 6-phosphogluconolactonase, malaria, carbohydrate metabolism, glucose metabolism, NADP, oxidoreductase,; HET: MSE; 2.00A {Plasmodium vivax}
Probab=21.61 E-value=91 Score=26.70 Aligned_cols=41 Identities=22% Similarity=0.290 Sum_probs=26.1
Q ss_pred cCEEEEecCCcCcHHHHHHHHHHHHhC-CCCCcEEEEeCCccc
Q 028256 115 ADAFIALPGGYGTLEELLEVITWAQLG-IHDKPVGLLNVDGYY 156 (211)
Q Consensus 115 sDa~IvlpGG~GTL~El~~~~~~~~lg-~~~kPiill~~~g~~ 156 (211)
..+.|+|+|| .|...+++.+...+-+ ..=+-|.+++.+.||
T Consensus 60 ~~~~l~LsgG-sTP~~ly~~L~~~~~~~idw~~V~~f~~DEr~ 101 (312)
T 3e15_A 60 GHVVIGLSGG-KTPIDVYKNIALVKDIKIDTSKLIFFIIDERY 101 (312)
T ss_dssp CCCEEEECCS-HHHHHHHHHHTTCCSSCCCGGGCEEEESEEEC
T ss_pred CCEEEEEeCC-CCHHHHHHHHHHhhccCCCccceEEEEeeeec
Confidence 5789999999 6777777766521111 112567777777665
No 480
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=21.60 E-value=2.5e+02 Score=22.27 Aligned_cols=31 Identities=16% Similarity=0.131 Sum_probs=21.4
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|-|.|+++ + ..+.+++.|+++|+.|+.-+
T Consensus 22 k~vlVTGas~-g-------IG~aia~~l~~~G~~V~~~~ 52 (273)
T 1ae1_A 22 TTALVTGGSK-G-------IGYAIVEELAGLGARVYTCS 52 (273)
T ss_dssp CEEEEESCSS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCcc-h-------HHHHHHHHHHHCCCEEEEEe
Confidence 5666766544 2 34678888899999987654
No 481
>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2
Probab=21.56 E-value=82 Score=24.90 Aligned_cols=29 Identities=24% Similarity=0.340 Sum_probs=24.5
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-+|+.+
T Consensus 4 ~vlVTGas~-gIG~~ia~~l~~~G~~V~~~ 32 (256)
T 1geg_A 4 VALVTGAGQ-GIGKAIALRLVKDGFAVAIA 32 (256)
T ss_dssp EEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEECCCC-hHHHHHHHHHHHCCCEEEEE
Confidence 468999975 99889999999999888776
No 482
>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}
Probab=21.48 E-value=2.9e+02 Score=21.51 Aligned_cols=29 Identities=34% Similarity=0.528 Sum_probs=18.1
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|.+|+.+
T Consensus 9 ~~lVTGas~-gIG~aia~~l~~~G~~V~~~ 37 (257)
T 3tpc_A 9 VFIVTGASS-GLGAAVTRMLAQEGATVLGL 37 (257)
T ss_dssp EEEEESTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCC-HHHHHHHHHHHHCCCEEEEE
Confidence 346666654 66666666666666666554
No 483
>3mcu_A Dipicolinate synthase, B chain; NESG, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium; 2.30A {Bacillus cereus}
Probab=21.40 E-value=1.5e+02 Score=23.79 Aligned_cols=83 Identities=14% Similarity=0.018 Sum_probs=49.9
Q ss_pred HHhcCEEEEecCCcCcHHHHHHHH--------HHHHhCCCCCcEEEEe--CCccchhHHHHHHHHHHcCCC--Ccccc-c
Q 028256 112 ARQADAFIALPGGYGTLEELLEVI--------TWAQLGIHDKPVGLLN--VDGYYNSLLSFIDKAVDEGFI--APAAR-Y 178 (211)
Q Consensus 112 ~~~sDa~IvlpGG~GTL~El~~~~--------~~~~lg~~~kPiill~--~~g~~~~l~~~l~~~~~~g~i--~~~~~-~ 178 (211)
...+|++||.|-..+|+.-+..=+ ....+ ..++|+++.- ....|.+. +-+..+.+.|.+ .+... .
T Consensus 82 s~~aD~mvIaPaTanTlAKiA~GiaDnLlt~aa~~~L-~~~~plvlaPamn~~m~~h~-~Nm~~L~~~G~~ii~P~~~la 159 (207)
T 3mcu_A 82 KIPLDCMVIAPLTGNSMSKFANAMTDSPVLMAAKATL-RNGKPVVLAVSTNDALGLNG-VNLMRLMATKNIYFVPFGQDA 159 (207)
T ss_dssp TSCCSEEEEEEECHHHHHHHHTTCCCSHHHHHHHHHH-HTTCCEEEEEEETTTTTTTH-HHHHHHHHBTTEEECCEEESC
T ss_pred chhcCEEEEecCCHHHHHHHHccccCcHHHHHHHHHH-hcCCCEEEEECCChhHHHHH-HHHHHHHHCCCEEECCCCccC
Confidence 356899999999999987764211 11112 2578999872 23588884 345667777754 33221 1
Q ss_pred c----eEEcCCHHHHHHHhhhh
Q 028256 179 I----IVSAQTAHELICKLEVF 196 (211)
Q Consensus 179 ~----i~~~~d~ee~~~~l~~~ 196 (211)
+ .--.-+++++++.+.+.
T Consensus 160 cg~~g~g~mae~~~I~~~i~~~ 181 (207)
T 3mcu_A 160 PEKKPNSMVARMELLEDTVLEA 181 (207)
T ss_dssp TTTSTTCEEECGGGHHHHHHHH
T ss_pred CCCcCCcCCCCHHHHHHHHHHH
Confidence 1 11235778888777654
No 484
>1fs5_A Glucosamine-6-phosphate deaminase; allosteric enzyme, entropic effects, aldose-ketose isomerase multiple conformers, isomerase; HET: 16G TLA; 1.73A {Escherichia coli} SCOP: c.124.1.1 PDB: 1cd5_A 1fqo_A* 1frz_A* 1dea_A* 1fs6_A 1fsf_A 1hor_A* 1hot_A* 2wu1_A* 1jt9_A
Probab=21.36 E-value=3e+02 Score=22.08 Aligned_cols=40 Identities=25% Similarity=0.272 Sum_probs=25.2
Q ss_pred CEEEEecCCcCcHHHHHHHHHHHHh-C-CCCCcEEEEeCCccc
Q 028256 116 DAFIALPGGYGTLEELLEVITWAQL-G-IHDKPVGLLNVDGYY 156 (211)
Q Consensus 116 Da~IvlpGG~GTL~El~~~~~~~~l-g-~~~kPiill~~~g~~ 156 (211)
+..|+++||. |+.++++.+.-... + ..-+.+-++..+++|
T Consensus 34 ~~~i~lsgGs-Tp~~~~~~L~~~~~~~~~~~~~v~v~~ldEr~ 75 (266)
T 1fs5_A 34 PFVLGLPTGG-TPMTTYKALVEMHKAGQVSFKHVVTFNMDEYV 75 (266)
T ss_dssp CEEEEECCSS-TTHHHHHHHHHHHHTTSCCCTTEEEEESEEES
T ss_pred ceEEEEcCCC-CHHHHHHHHHHHhhcCCCChHHeEEEeCeecc
Confidence 6788998885 88888887753211 2 222456666666555
No 485
>1kam_A Deamido-NAD(+), nicotinate-nucleotide adenylyltransferase; rossman fold; 2.10A {Bacillus subtilis} SCOP: c.26.1.3 PDB: 1kaq_A*
Probab=21.33 E-value=84 Score=24.18 Aligned_cols=28 Identities=18% Similarity=0.185 Sum_probs=18.8
Q ss_pred hcCcceEEEEeCCCCCCCHHHHHHHHHH
Q 028256 15 KSRFKRVCVFCGSSPGKSPSYQLAAIQL 42 (211)
Q Consensus 15 ~~~~~~I~Vfggs~~~~~~~~~~~A~~l 42 (211)
++.|++++|++||=.+..--+...+++.
T Consensus 3 ~~~m~~~~v~~GsFdp~H~GH~~l~~~a 30 (194)
T 1kam_A 3 PGGSKKIGIFGGTFDPPHNGHLLMANEV 30 (194)
T ss_dssp ---CCEEEEEEECCSSCCHHHHHHHHHH
T ss_pred CCCCcEEEEEEeccccccHHHHHHHHHH
Confidence 4457789999999888777666555543
No 486
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=21.29 E-value=3.5e+02 Score=22.34 Aligned_cols=68 Identities=10% Similarity=0.051 Sum_probs=37.1
Q ss_pred CcceEEEEeCCCCCC---CHHHHHHHHHHHHHHHHcCCeEEecCCCCChhHHH--HHHHHhcCCeEEEEecCcC
Q 028256 17 RFKRVCVFCGSSPGK---SPSYQLAAIQLGKQLVERNIDLVYGGGSIGLMGLV--SQAVYDGGRHVLGVIPKTL 85 (211)
Q Consensus 17 ~~~~I~Vfggs~~~~---~~~~~~~A~~lG~~la~~g~~lv~GGg~~GlM~a~--a~gA~~~gG~viGv~P~~~ 85 (211)
...-|.|.|++.... .++..+..+ .....+.....|+.|-|....-+++ ++.|.+.|..-+-++|..+
T Consensus 41 Gv~gl~~~GttGE~~~Ls~~Er~~v~~-~~~~~~~grvpviaGvg~~~t~~ai~la~~a~~~Gadavlv~~P~y 113 (297)
T 3flu_A 41 GTDGIVAVGTTGESATLSVEEHTAVIE-AVVKHVAKRVPVIAGTGANNTVEAIALSQAAEKAGADYTLSVVPYY 113 (297)
T ss_dssp TCCEEEESSTTTTGGGSCHHHHHHHHH-HHHHHHTTSSCEEEECCCSSHHHHHHHHHHHHHTTCSEEEEECCCS
T ss_pred CCCEEEeCccccCcccCCHHHHHHHHH-HHHHHhCCCCcEEEeCCCcCHHHHHHHHHHHHHcCCCEEEECCCCC
Confidence 344566665444332 233333333 3333333457777787765676665 4556777877777666544
No 487
>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}
Probab=21.28 E-value=84 Score=24.64 Aligned_cols=31 Identities=10% Similarity=-0.061 Sum_probs=20.0
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+++ -..+.+++.|+++|+.|+..+
T Consensus 8 k~vlITGasg--------giG~~la~~l~~~G~~V~~~~ 38 (264)
T 2pd6_A 8 ALALVTGAGS--------GIGRAVSVRLAGEGATVAACD 38 (264)
T ss_dssp CEEEEETTTS--------HHHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEECCCC--------hHHHHHHHHHHHCCCEEEEEe
Confidence 4566665543 134567778888888877554
No 488
>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0
Probab=21.26 E-value=69 Score=25.34 Aligned_cols=29 Identities=24% Similarity=0.268 Sum_probs=24.8
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
..|||||+. |+=.++++...+.|-.|+.+
T Consensus 9 ~vlVTGas~-gIG~~~a~~l~~~G~~v~~~ 37 (264)
T 3i4f_A 9 HALITAGTK-GLGKQVTEKLLAKGYSVTVT 37 (264)
T ss_dssp EEEETTTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred EEEEeCCCc-hhHHHHHHHHHHCCCEEEEE
Confidence 468999875 99899999999999888876
No 489
>2r7k_A 5-formaminoimidazole-4-carboxamide-1-(beta)-D- ribofuranosyl 5'-monophosphate synthetase...; ATP-grAsp superfamily, ATP-binding; HET: ACP AMZ; 2.10A {Methanocaldococcus jannaschii} SCOP: c.30.1.8 d.142.1.9 PDB: 2r7l_A* 2r7m_A* 2r7n_A*
Probab=21.25 E-value=1.6e+02 Score=25.36 Aligned_cols=49 Identities=10% Similarity=-0.040 Sum_probs=30.0
Q ss_pred EEecCCCCChhHHHHHHHHhcCCeEEEEecCcCCCCCCCCCCCceeeecCCH
Q 028256 53 LVYGGGSIGLMGLVSQAVYDGGRHVLGVIPKTLMPREITGDTVGEVKAVSGM 104 (211)
Q Consensus 53 lv~GGg~~GlM~a~a~gA~~~gG~viGv~P~~~~~~e~~~~~~~~~~~~~~~ 104 (211)
.+.||| .|+| ++++|++.|=.++.+-+....|.-......++.++.+++
T Consensus 22 ~ilGs~-l~~~--l~~aAk~lG~~vi~vd~~~~~p~~~~~~~ad~~~~~d~~ 70 (361)
T 2r7k_A 22 ATLGSH-TSLH--ILKGAKLEGFSTVCITMKGRDVPYKRFKVADKFIYVDNF 70 (361)
T ss_dssp EEESST-THHH--HHHHHHHTTCCEEEEECTTSCHHHHHTTCCSEEEECSSG
T ss_pred EEECcH-HHHH--HHHHHHHCCCEEEEEECCCCCCcccccccCceEEECCCc
Confidence 355666 4888 889999999999988665322100012233556666655
No 490
>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*
Probab=21.24 E-value=84 Score=25.07 Aligned_cols=31 Identities=23% Similarity=0.353 Sum_probs=19.8
Q ss_pred ceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEEecC
Q 028256 19 KRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLVYGG 57 (211)
Q Consensus 19 ~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv~GG 57 (211)
++|.|.|+|+ + ..+++++.|+++|+.|+..+
T Consensus 8 k~vlVTGas~-g-------IG~~ia~~l~~~G~~V~~~~ 38 (260)
T 1nff_A 8 KVALVSGGAR-G-------MGASHVRAMVAEGAKVVFGD 38 (260)
T ss_dssp CEEEEETTTS-H-------HHHHHHHHHHHTTCEEEEEE
T ss_pred CEEEEeCCCC-H-------HHHHHHHHHHHCCCEEEEEe
Confidence 4566665544 1 34567777888888876544
No 491
>4axs_A Carbamate kinase; oxidoreductase; 2.50A {Mycoplasma penetrans}
Probab=21.23 E-value=53 Score=28.39 Aligned_cols=43 Identities=14% Similarity=0.319 Sum_probs=22.5
Q ss_pred CcceEEE-EeCCCCCCCH-HHHHHHHHHHHHHHH---cCCe--EEecCCC
Q 028256 17 RFKRVCV-FCGSSPGKSP-SYQLAAIQLGKQLVE---RNID--LVYGGGS 59 (211)
Q Consensus 17 ~~~~I~V-fggs~~~~~~-~~~~~A~~lG~~la~---~g~~--lv~GGg~ 59 (211)
.|++|.| +||+....++ ...+..+.+++.|+. .|+. ||.||||
T Consensus 23 ~MkRIVIklGGnAL~~~~~~q~~~~~~~a~~Ia~L~~~G~~vVvVHGgGP 72 (332)
T 4axs_A 23 HMSRIVIALGGNALGDNPSQQKELVKIPAAKIAALIQEGHEVIVGHGNGP 72 (332)
T ss_dssp ---CEEEEECGGGGCSSHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCHH
T ss_pred CcceEEEEEChhhcCCChHHHHHHHHHHHHHHHHHHHCCCEEEEEcCCcH
Confidence 3455555 5555555443 223444555666553 5665 4689887
No 492
>2va1_A Uridylate kinase; UMPK, transferase, pyrimidine biosynthesis, amino acid kinase family; 2.50A {Ureaplasma parvum}
Probab=21.20 E-value=3.2e+02 Score=21.90 Aligned_cols=46 Identities=22% Similarity=0.248 Sum_probs=27.8
Q ss_pred HHHHhcCEEEEecCC---cCcHHHHHHHHHHHHhCCCCCcEEEEe-CCccch
Q 028256 110 EMARQADAFIALPGG---YGTLEELLEVITWAQLGIHDKPVGLLN-VDGYYN 157 (211)
Q Consensus 110 ~m~~~sDa~IvlpGG---~GTL~El~~~~~~~~lg~~~kPiill~-~~g~~~ 157 (211)
.+++.....|+-|+. +++-|.++..++ ..++. .+-+++-+ ++|.|+
T Consensus 138 ~lL~~g~IpVi~~~~g~~~~~~D~~Aa~lA-~~l~A-d~LiilTD~VdGVy~ 187 (256)
T 2va1_A 138 KAIEKEQVMIFVAGTGFPYFTTDSCAAIRA-AETES-SIILMGKNGVDGVYD 187 (256)
T ss_dssp HHHHTTCEEEEESTTSSSSCCHHHHHHHHH-HHHTC-SEEEEEESSCCSBCS
T ss_pred HHHhCCcEEEEECCCCCCCCChhHHHHHHH-HhCCC-CEEEEeecccCeEEc
Confidence 455655555555432 577787776655 34432 34555668 899885
No 493
>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}
Probab=21.18 E-value=3.5e+02 Score=22.26 Aligned_cols=31 Identities=26% Similarity=0.139 Sum_probs=21.3
Q ss_pred CeEEecCCCCChhHHHHHHHHhcCCeEEEEec
Q 028256 51 IDLVYGGGSIGLMGLVSQAVYDGGRHVLGVIP 82 (211)
Q Consensus 51 ~~lv~GGg~~GlM~a~a~gA~~~gG~viGv~P 82 (211)
..+|+|++. |+=.++++-|+..|.+|+++..
T Consensus 169 ~vlV~Gasg-~iG~~~~~~a~~~G~~Vi~~~~ 199 (343)
T 2eih_A 169 DVLVMAAGS-GVSVAAIQIAKLFGARVIATAG 199 (343)
T ss_dssp EEEECSTTS-TTHHHHHHHHHHTTCEEEEEES
T ss_pred EEEEECCCc-hHHHHHHHHHHHCCCEEEEEeC
Confidence 467888732 4444566777788889888754
No 494
>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}
Probab=21.17 E-value=84 Score=25.08 Aligned_cols=11 Identities=9% Similarity=0.265 Sum_probs=6.8
Q ss_pred CCHHHHHHHhh
Q 028256 184 QTAHELICKLE 194 (211)
Q Consensus 184 ~d~ee~~~~l~ 194 (211)
-+|+|+.+.+.
T Consensus 218 ~~p~dvA~~i~ 228 (253)
T 2nm0_A 218 ARPEEIAATVR 228 (253)
T ss_dssp BCHHHHHHHHH
T ss_pred cCHHHHHHHHH
Confidence 36777666654
No 495
>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}
Probab=21.13 E-value=2.9e+02 Score=21.41 Aligned_cols=30 Identities=30% Similarity=0.489 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 10 k~vlITGas~-gIG~~~a~~l~~~G~~V~~~ 39 (261)
T 3n74_A 10 KVALITGAGS-GFGEGMAKRFAKGGAKVVIV 39 (261)
T ss_dssp CEEEEETTTS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCCc-hHHHHHHHHHHHCCCEEEEE
Confidence 3578999975 99899999999999888876
No 496
>3bfj_A 1,3-propanediol oxidoreductase; opportunistic pathogens, decamer, structural genomics,struct proteomics in europe, spine; 2.70A {Klebsiella pneumoniae}
Probab=21.07 E-value=1.3e+02 Score=25.77 Aligned_cols=14 Identities=29% Similarity=0.551 Sum_probs=11.2
Q ss_pred HHhcCEEEEecCCc
Q 028256 112 ARQADAFIALPGGY 125 (211)
Q Consensus 112 ~~~sDa~IvlpGG~ 125 (211)
...+|.+|.++||+
T Consensus 90 ~~~~d~IIavGGGs 103 (387)
T 3bfj_A 90 REQCDIIVTVGGGS 103 (387)
T ss_dssp HTTCCEEEEEESHH
T ss_pred hcCCCEEEEeCCcc
Confidence 35679999999984
No 497
>2ogx_B Molybdenum storage protein subunit beta; open alpha/beta structure, metal binding protein; HET: ATP; 1.60A {Azotobacter vinelandii}
Probab=21.06 E-value=96 Score=25.46 Aligned_cols=30 Identities=17% Similarity=0.223 Sum_probs=18.1
Q ss_pred CcHHHHHHHHHHHHhCCCCCcEEEEeCCccch
Q 028256 126 GTLEELLEVITWAQLGIHDKPVGLLNVDGYYN 157 (211)
Q Consensus 126 GTL~El~~~~~~~~lg~~~kPiill~~~g~~~ 157 (211)
++-|.++..++ ..++. .+=+++-+++|.|+
T Consensus 167 ~~~D~~Aa~lA-~~l~A-d~Li~lTDVdGvy~ 196 (270)
T 2ogx_B 167 YRTDAGCFLLA-EQFGC-KQMIFVKDEDGLYT 196 (270)
T ss_dssp SCHHHHHHHHH-HHHTC-SEEEEEESSSSEES
T ss_pred CCcHHHHHHHH-HhcCC-CEEEEEeCCCcccC
Confidence 66677766554 33432 34555668888885
No 498
>3uug_A Multiple sugar-binding periplasmic receptor CHVE; periplasmic binding protein, sugar-binding protein, sugar binding protein; HET: BDP; 1.75A {Agrobacterium tumefaciens} PDB: 3urm_A*
Probab=21.04 E-value=3.2e+02 Score=21.75 Aligned_cols=35 Identities=17% Similarity=0.024 Sum_probs=21.8
Q ss_pred cceEEEEeCCCCCCCHHHHHHHHHHHHHHHHcCCeEE
Q 028256 18 FKRVCVFCGSSPGKSPSYQLAAIQLGKQLVERNIDLV 54 (211)
Q Consensus 18 ~~~I~Vfggs~~~~~~~~~~~A~~lG~~la~~g~~lv 54 (211)
.++|+|+..+. .++-|.+....+-+.+.++|+.++
T Consensus 3 ~~~Igvi~~~~--~~~~~~~~~~gi~~~a~~~g~~~~ 37 (330)
T 3uug_A 3 KGSVGIAMPTK--SSARWIDDGNNIVKQLQEAGYKTD 37 (330)
T ss_dssp CCEEEEEECCS--SSTHHHHHHHHHHHHHHHTTCEEE
T ss_pred CcEEEEEeCCC--cchHHHHHHHHHHHHHHHcCCEEE
Confidence 45788887543 256666666666666666666654
No 499
>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A
Probab=21.00 E-value=71 Score=25.25 Aligned_cols=15 Identities=7% Similarity=0.297 Sum_probs=7.9
Q ss_pred HHHHHHHHHcCCeEE
Q 028256 40 IQLGKQLVERNIDLV 54 (211)
Q Consensus 40 ~~lG~~la~~g~~lv 54 (211)
+++++.|+++|+.|+
T Consensus 29 ~~ia~~l~~~G~~V~ 43 (247)
T 1uzm_A 29 LAIAQRLAADGHKVA 43 (247)
T ss_dssp HHHHHHHHHTTCEEE
T ss_pred HHHHHHHHHCCCEEE
Confidence 345555555555554
No 500
>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2
Probab=21.00 E-value=85 Score=25.20 Aligned_cols=30 Identities=23% Similarity=0.307 Sum_probs=25.2
Q ss_pred CCeEEecCCCCChhHHHHHHHHhcCCeEEEE
Q 028256 50 NIDLVYGGGSIGLMGLVSQAVYDGGRHVLGV 80 (211)
Q Consensus 50 g~~lv~GGg~~GlM~a~a~gA~~~gG~viGv 80 (211)
...|||||+. |+=.++++...+.|-+|+.+
T Consensus 22 k~vlVTGas~-gIG~aia~~l~~~G~~V~~~ 51 (273)
T 1ae1_A 22 TTALVTGGSK-GIGYAIVEELAGLGARVYTC 51 (273)
T ss_dssp CEEEEESCSS-HHHHHHHHHHHHTTCEEEEE
T ss_pred CEEEEECCcc-hHHHHHHHHHHHCCCEEEEE
Confidence 4578999975 99899999999999888776
Done!