Query 028258
Match_columns 211
No_of_seqs 149 out of 2091
Neff 8.8
Searched_HMMs 46136
Date Fri Mar 29 08:43:10 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028258.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028258hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 COG1087 GalE UDP-glucose 4-epi 99.9 4.1E-26 8.9E-31 184.5 16.0 164 10-200 1-178 (329)
2 PF01073 3Beta_HSD: 3-beta hyd 99.9 2.2E-25 4.7E-30 184.1 16.6 170 13-205 1-192 (280)
3 PRK15181 Vi polysaccharide bio 99.9 4.8E-25 1E-29 187.3 16.6 163 8-199 14-200 (348)
4 PLN02214 cinnamoyl-CoA reducta 99.9 2.2E-23 4.8E-28 176.8 17.9 169 8-200 9-197 (342)
5 KOG1502 Flavonol reductase/cin 99.9 1.5E-23 3.4E-28 173.1 16.1 177 4-201 1-201 (327)
6 PRK09987 dTDP-4-dehydrorhamnos 99.9 2.4E-23 5.3E-28 173.4 15.4 153 11-202 2-162 (299)
7 PLN00198 anthocyanidin reducta 99.9 1.3E-22 2.9E-27 171.4 19.1 178 1-200 1-204 (338)
8 PLN02572 UDP-sulfoquinovose sy 99.9 8E-23 1.7E-27 178.7 17.7 171 8-199 46-263 (442)
9 PLN02427 UDP-apiose/xylose syn 99.9 9.4E-23 2E-27 175.4 17.1 169 9-199 14-217 (386)
10 PRK11908 NAD-dependent epimera 99.9 6.6E-23 1.4E-27 173.9 15.8 163 10-199 2-184 (347)
11 PLN02695 GDP-D-mannose-3',5'-e 99.9 9.5E-23 2.1E-27 174.6 16.5 171 6-199 18-202 (370)
12 PF01370 Epimerase: NAD depend 99.9 2.9E-23 6.3E-28 166.1 11.8 160 12-198 1-174 (236)
13 PLN02650 dihydroflavonol-4-red 99.9 2.8E-22 6E-27 170.4 17.9 169 7-200 3-199 (351)
14 PLN02989 cinnamyl-alcohol dehy 99.9 6.1E-22 1.3E-26 166.4 17.7 171 9-200 5-200 (325)
15 PLN02986 cinnamyl-alcohol dehy 99.9 1E-21 2.3E-26 164.9 18.2 168 9-199 5-198 (322)
16 TIGR02622 CDP_4_6_dhtase CDP-g 99.9 7.1E-22 1.5E-26 167.8 16.6 166 9-199 4-194 (349)
17 COG0451 WcaG Nucleoside-diphos 99.9 8.5E-22 1.8E-26 163.9 16.7 162 12-200 3-178 (314)
18 PRK10217 dTDP-glucose 4,6-dehy 99.9 8.1E-22 1.8E-26 167.5 16.8 170 10-199 2-195 (355)
19 PRK08125 bifunctional UDP-gluc 99.9 5.7E-22 1.2E-26 181.2 16.4 164 9-199 315-498 (660)
20 TIGR01472 gmd GDP-mannose 4,6- 99.9 8.6E-22 1.9E-26 166.9 16.3 166 10-200 1-192 (343)
21 PLN02662 cinnamyl-alcohol dehy 99.9 8E-22 1.7E-26 165.2 16.0 168 9-199 4-197 (322)
22 KOG1371 UDP-glucose 4-epimeras 99.9 9.5E-22 2.1E-26 160.7 15.8 166 8-199 1-188 (343)
23 PLN02240 UDP-glucose 4-epimera 99.9 3.3E-21 7.2E-26 163.5 17.7 166 7-199 3-192 (352)
24 COG1088 RfbB dTDP-D-glucose 4, 99.9 1.4E-21 3.1E-26 157.8 14.4 167 10-198 1-186 (340)
25 TIGR03466 HpnA hopanoid-associ 99.9 3.6E-21 7.9E-26 161.2 17.5 164 11-200 2-177 (328)
26 PLN02896 cinnamyl-alcohol dehy 99.9 3.9E-21 8.5E-26 163.5 15.7 170 9-199 10-211 (353)
27 PLN02583 cinnamoyl-CoA reducta 99.9 7.3E-21 1.6E-25 158.4 15.9 171 8-200 5-199 (297)
28 PRK10675 UDP-galactose-4-epime 99.9 1.6E-20 3.4E-25 158.5 17.0 163 11-199 2-185 (338)
29 KOG1430 C-3 sterol dehydrogena 99.9 1.2E-20 2.5E-25 158.7 15.8 171 7-202 2-191 (361)
30 PLN02653 GDP-mannose 4,6-dehyd 99.9 2.2E-20 4.8E-25 158.0 17.0 169 9-200 6-198 (340)
31 PLN02686 cinnamoyl-CoA reducta 99.9 1.1E-20 2.4E-25 161.7 15.0 174 4-199 48-251 (367)
32 TIGR01214 rmlD dTDP-4-dehydror 99.9 1.5E-20 3.3E-25 155.1 15.3 147 11-199 1-155 (287)
33 PLN02260 probable rhamnose bio 99.9 1.3E-20 2.8E-25 172.6 16.4 171 9-199 6-194 (668)
34 PRK11150 rfaD ADP-L-glycero-D- 99.9 8E-21 1.7E-25 158.5 12.6 158 12-199 2-175 (308)
35 PLN02725 GDP-4-keto-6-deoxyman 99.9 6.7E-21 1.5E-25 158.4 11.9 149 13-199 1-165 (306)
36 CHL00194 ycf39 Ycf39; Provisio 99.8 6E-21 1.3E-25 160.2 11.2 148 11-197 2-150 (317)
37 PLN02166 dTDP-glucose 4,6-dehy 99.8 1.6E-20 3.4E-25 163.9 13.4 156 9-199 120-298 (436)
38 PLN02206 UDP-glucuronate decar 99.8 3.8E-20 8.3E-25 161.7 15.0 158 9-199 119-297 (442)
39 TIGR01181 dTDP_gluc_dehyt dTDP 99.8 1E-19 2.2E-24 151.5 15.7 164 11-199 1-185 (317)
40 TIGR01179 galE UDP-glucose-4-e 99.8 2.3E-19 5E-24 149.9 16.3 163 11-200 1-182 (328)
41 PF13460 NAD_binding_10: NADH( 99.8 3.3E-20 7.2E-25 143.4 10.4 148 12-200 1-152 (183)
42 KOG1429 dTDP-glucose 4-6-dehyd 99.8 7.3E-20 1.6E-24 146.9 12.1 158 9-199 27-205 (350)
43 TIGR03589 PseB UDP-N-acetylglu 99.8 2.4E-19 5.1E-24 151.1 16.0 153 8-198 3-172 (324)
44 PLN02657 3,8-divinyl protochlo 99.8 9.9E-20 2.1E-24 157.0 13.4 156 8-197 59-223 (390)
45 PRK10084 dTDP-glucose 4,6 dehy 99.8 2.7E-19 5.8E-24 151.9 15.2 177 11-199 2-202 (352)
46 PF04321 RmlD_sub_bind: RmlD s 99.8 6.8E-20 1.5E-24 151.9 11.2 152 10-203 1-160 (286)
47 COG1091 RfbD dTDP-4-dehydrorha 99.8 2E-19 4.3E-24 146.5 12.6 155 12-209 3-165 (281)
48 PRK07201 short chain dehydroge 99.8 3.4E-19 7.3E-24 162.8 15.2 165 11-199 2-183 (657)
49 TIGR02197 heptose_epim ADP-L-g 99.8 4.1E-19 8.8E-24 148.1 13.9 161 12-199 1-175 (314)
50 TIGR01777 yfcH conserved hypot 99.8 7E-19 1.5E-23 145.1 14.2 157 12-199 1-170 (292)
51 PLN00016 RNA-binding protein; 99.8 4.2E-19 9E-24 152.5 13.3 151 8-200 51-217 (378)
52 COG3320 Putative dehydrogenase 99.8 2.3E-18 5E-23 143.8 15.3 173 10-204 1-207 (382)
53 PLN02996 fatty acyl-CoA reduct 99.8 3.5E-18 7.6E-23 151.2 16.3 121 8-139 10-167 (491)
54 PF07993 NAD_binding_4: Male s 99.8 4.2E-19 9.2E-24 144.3 8.8 168 14-204 1-208 (249)
55 PLN00141 Tic62-NAD(P)-related 99.8 3.5E-18 7.7E-23 138.8 12.5 163 8-199 16-188 (251)
56 PLN03209 translocon at the inn 99.8 4.1E-18 8.9E-23 150.9 12.2 160 4-198 75-257 (576)
57 TIGR01746 Thioester-redct thio 99.8 1.6E-17 3.4E-22 140.8 15.0 162 11-199 1-199 (367)
58 COG1089 Gmd GDP-D-mannose dehy 99.8 1.3E-17 2.8E-22 134.1 12.8 161 8-193 1-184 (345)
59 PLN02778 3,5-epimerase/4-reduc 99.8 3.4E-17 7.3E-22 136.5 15.8 159 1-198 1-170 (298)
60 PRK05865 hypothetical protein; 99.7 3.9E-17 8.5E-22 151.1 15.0 132 11-199 2-133 (854)
61 KOG0747 Putative NAD+-dependen 99.7 2.9E-17 6.4E-22 132.0 11.9 168 9-199 6-192 (331)
62 PF02719 Polysacc_synt_2: Poly 99.7 9.7E-18 2.1E-22 137.4 9.1 148 12-198 1-175 (293)
63 PRK12825 fabG 3-ketoacyl-(acyl 99.7 9.9E-17 2.1E-21 128.8 14.7 170 4-200 1-195 (249)
64 PRK12320 hypothetical protein; 99.7 8.3E-17 1.8E-21 146.2 15.4 136 11-199 2-137 (699)
65 PLN02503 fatty acyl-CoA reduct 99.7 1.5E-16 3.3E-21 142.8 16.9 122 8-139 118-274 (605)
66 PRK06179 short chain dehydroge 99.7 3.1E-16 6.8E-21 128.3 15.9 160 8-199 3-183 (270)
67 PRK06482 short chain dehydroge 99.7 2.9E-16 6.3E-21 129.0 14.9 119 9-134 2-136 (276)
68 PRK09135 pteridine reductase; 99.7 3.6E-16 7.9E-21 125.9 15.1 109 4-118 1-130 (249)
69 PRK12826 3-ketoacyl-(acyl-carr 99.7 2.9E-16 6.3E-21 126.6 13.9 165 4-199 1-194 (251)
70 PRK06180 short chain dehydroge 99.7 6.5E-16 1.4E-20 127.2 15.6 123 8-137 3-141 (277)
71 COG1086 Predicted nucleoside-d 99.7 5.1E-16 1.1E-20 135.5 15.5 154 8-201 249-425 (588)
72 PRK13394 3-hydroxybutyrate deh 99.7 4.7E-16 1E-20 126.4 14.1 163 6-199 4-195 (262)
73 PRK08264 short chain dehydroge 99.7 8.9E-16 1.9E-20 123.2 15.4 162 5-198 2-183 (238)
74 PRK05993 short chain dehydroge 99.7 4E-16 8.7E-21 128.5 13.7 116 8-134 3-136 (277)
75 PRK12429 3-hydroxybutyrate deh 99.7 1E-15 2.2E-20 124.0 14.7 166 7-199 2-191 (258)
76 PRK12745 3-ketoacyl-(acyl-carr 99.7 1.1E-15 2.3E-20 124.0 14.2 166 8-199 1-198 (256)
77 PRK09186 flagellin modificatio 99.7 1.7E-15 3.6E-20 122.8 15.0 171 7-198 2-205 (256)
78 PRK07453 protochlorophyllide o 99.7 2.9E-15 6.2E-20 126.0 16.8 129 4-138 1-150 (322)
79 PRK05653 fabG 3-ketoacyl-(acyl 99.7 1.3E-15 2.9E-20 122.2 14.1 168 6-200 2-193 (246)
80 PLN02260 probable rhamnose bio 99.7 4.2E-16 9E-21 143.0 12.4 152 8-198 379-541 (668)
81 TIGR03649 ergot_EASG ergot alk 99.7 1.2E-15 2.6E-20 126.0 13.5 138 11-197 1-141 (285)
82 PRK06914 short chain dehydroge 99.7 2.8E-15 6E-20 123.3 15.5 162 8-198 2-190 (280)
83 PRK08263 short chain dehydroge 99.7 1.9E-15 4.1E-20 124.2 14.4 123 8-137 2-140 (275)
84 PRK12827 short chain dehydroge 99.7 3.2E-15 6.8E-20 120.4 15.2 169 4-199 1-198 (249)
85 PRK06182 short chain dehydroge 99.7 2E-15 4.4E-20 123.9 13.9 116 8-134 2-134 (273)
86 COG1090 Predicted nucleoside-d 99.7 1.1E-15 2.4E-20 122.8 11.9 159 12-202 1-171 (297)
87 PRK07806 short chain dehydroge 99.7 1.3E-15 2.9E-20 122.9 12.5 122 4-134 1-136 (248)
88 PRK06196 oxidoreductase; Provi 99.7 2.3E-15 4.9E-20 126.3 13.8 171 8-198 25-218 (315)
89 PRK06523 short chain dehydroge 99.7 5.4E-15 1.2E-19 120.3 15.5 163 4-198 4-189 (260)
90 PRK07067 sorbitol dehydrogenas 99.6 3E-15 6.5E-20 121.6 13.1 166 6-198 3-190 (257)
91 PRK07060 short chain dehydroge 99.6 2.2E-15 4.9E-20 121.2 12.0 169 4-199 4-188 (245)
92 PRK12828 short chain dehydroge 99.6 6.3E-15 1.4E-19 117.9 14.4 164 8-198 6-191 (239)
93 PRK12746 short chain dehydroge 99.6 5.5E-15 1.2E-19 119.7 14.1 163 7-198 4-197 (254)
94 COG4221 Short-chain alcohol de 99.6 9.2E-15 2E-19 116.0 14.8 125 4-135 1-142 (246)
95 PRK06500 short chain dehydroge 99.6 5E-15 1.1E-19 119.5 13.6 165 4-198 1-187 (249)
96 PRK05876 short chain dehydroge 99.6 5E-15 1.1E-19 122.0 13.7 128 4-137 1-147 (275)
97 PRK12829 short chain dehydroge 99.6 4.1E-15 8.9E-20 120.9 13.0 167 6-199 8-198 (264)
98 PRK06398 aldose dehydrogenase; 99.6 1.9E-14 4.2E-19 117.3 16.8 123 4-137 1-135 (258)
99 PRK06101 short chain dehydroge 99.6 6.2E-15 1.4E-19 118.8 13.7 116 10-134 2-129 (240)
100 PRK07523 gluconate 5-dehydroge 99.6 4.9E-15 1.1E-19 120.2 13.0 164 8-198 9-196 (255)
101 PRK07774 short chain dehydroge 99.6 7.6E-15 1.7E-19 118.5 13.9 164 5-199 2-193 (250)
102 COG0300 DltE Short-chain dehyd 99.6 7.2E-15 1.6E-19 119.2 13.4 163 4-197 1-192 (265)
103 PRK06171 sorbitol-6-phosphate 99.6 1.7E-14 3.8E-19 117.7 15.7 127 1-136 1-148 (266)
104 TIGR01963 PHB_DH 3-hydroxybuty 99.6 5.4E-15 1.2E-19 119.6 12.6 162 10-198 2-187 (255)
105 PRK06194 hypothetical protein; 99.6 7.1E-15 1.5E-19 121.3 13.3 126 6-137 3-152 (287)
106 PRK07666 fabG 3-ketoacyl-(acyl 99.6 1.1E-14 2.3E-19 117.1 14.1 124 6-136 4-146 (239)
107 PRK07890 short chain dehydroge 99.6 5.8E-15 1.3E-19 119.8 12.5 164 8-199 4-192 (258)
108 PRK07024 short chain dehydroge 99.6 4.7E-15 1E-19 120.6 11.9 160 8-198 1-188 (257)
109 PRK08628 short chain dehydroge 99.6 1.3E-14 2.9E-19 117.8 14.6 163 8-198 6-190 (258)
110 PRK07856 short chain dehydroge 99.6 2.4E-14 5.2E-19 116.1 16.0 123 6-135 3-137 (252)
111 TIGR03443 alpha_am_amid L-amin 99.6 9.5E-15 2.1E-19 143.4 16.0 179 9-200 971-1185(1389)
112 PRK06138 short chain dehydroge 99.6 1.2E-14 2.7E-19 117.3 14.1 164 8-199 4-191 (252)
113 PRK07326 short chain dehydroge 99.6 7E-15 1.5E-19 117.8 12.4 124 4-135 1-142 (237)
114 PRK12823 benD 1,6-dihydroxycyc 99.6 1E-14 2.2E-19 118.6 13.4 162 7-197 6-191 (260)
115 PRK05717 oxidoreductase; Valid 99.6 1.5E-14 3.4E-19 117.4 14.1 122 6-135 7-146 (255)
116 PRK08220 2,3-dihydroxybenzoate 99.6 3.1E-14 6.6E-19 115.1 15.3 164 7-199 6-186 (252)
117 PRK07454 short chain dehydroge 99.6 1.7E-14 3.6E-19 116.1 13.4 127 4-137 1-146 (241)
118 TIGR03206 benzo_BadH 2-hydroxy 99.6 1.4E-14 3E-19 116.9 12.9 164 8-198 2-189 (250)
119 PRK06128 oxidoreductase; Provi 99.6 2.2E-14 4.8E-19 119.5 14.4 163 7-198 53-242 (300)
120 PRK09291 short chain dehydroge 99.6 1.5E-14 3.2E-19 117.3 13.0 117 8-134 1-133 (257)
121 PRK07577 short chain dehydroge 99.6 3.1E-14 6.8E-19 113.8 14.6 159 8-198 2-176 (234)
122 PRK05875 short chain dehydroge 99.6 1.2E-14 2.6E-19 119.3 12.2 124 7-137 5-150 (276)
123 PRK08643 acetoin reductase; Va 99.6 3E-14 6.4E-19 115.6 14.4 122 8-135 1-141 (256)
124 PRK08267 short chain dehydroge 99.6 3.5E-14 7.6E-19 115.5 14.3 118 10-134 2-137 (260)
125 PRK07985 oxidoreductase; Provi 99.6 4.7E-14 1E-18 117.3 15.3 159 7-198 47-236 (294)
126 PRK08219 short chain dehydroge 99.6 2E-14 4.3E-19 114.3 12.5 120 8-137 2-133 (227)
127 PRK06197 short chain dehydroge 99.6 3.2E-14 6.9E-19 118.8 14.3 123 4-137 11-156 (306)
128 PRK07825 short chain dehydroge 99.6 1.9E-14 4.1E-19 118.0 12.3 122 8-136 4-140 (273)
129 PRK07775 short chain dehydroge 99.6 5.5E-14 1.2E-18 115.5 15.1 125 6-137 7-150 (274)
130 PRK07231 fabG 3-ketoacyl-(acyl 99.6 3.5E-14 7.6E-19 114.5 13.6 123 8-137 4-145 (251)
131 PRK06463 fabG 3-ketoacyl-(acyl 99.6 3.2E-14 6.9E-19 115.6 13.4 123 8-137 6-142 (255)
132 PRK12384 sorbitol-6-phosphate 99.6 6.3E-14 1.4E-18 113.9 15.0 121 8-134 1-142 (259)
133 PRK05693 short chain dehydroge 99.6 2.8E-14 6.1E-19 117.1 13.0 117 10-134 2-131 (274)
134 PRK08265 short chain dehydroge 99.6 4.4E-14 9.6E-19 115.3 13.9 124 4-135 1-139 (261)
135 KOG1431 GDP-L-fucose synthetas 99.6 6.6E-15 1.4E-19 115.2 8.4 152 10-199 2-171 (315)
136 PRK10538 malonic semialdehyde 99.6 5E-14 1.1E-18 114.0 14.0 119 10-135 1-136 (248)
137 PRK12935 acetoacetyl-CoA reduc 99.6 8.4E-14 1.8E-18 112.3 14.8 123 5-134 2-144 (247)
138 TIGR01832 kduD 2-deoxy-D-gluco 99.6 4.9E-14 1.1E-18 113.8 13.4 166 7-198 3-190 (248)
139 PRK06077 fabG 3-ketoacyl-(acyl 99.6 6.2E-14 1.3E-18 113.3 13.9 122 7-137 4-145 (252)
140 PRK06123 short chain dehydroge 99.6 5.3E-14 1.2E-18 113.5 13.4 165 8-198 1-194 (248)
141 PRK08017 oxidoreductase; Provi 99.6 6.9E-14 1.5E-18 113.3 14.0 115 9-134 2-134 (256)
142 PRK07576 short chain dehydroge 99.6 6.2E-14 1.3E-18 114.7 13.8 126 1-134 1-145 (264)
143 PRK08251 short chain dehydroge 99.6 6.6E-14 1.4E-18 113.0 13.9 121 8-135 1-142 (248)
144 PRK06701 short chain dehydroge 99.6 1.2E-13 2.6E-18 114.6 15.7 162 8-198 45-232 (290)
145 PRK12939 short chain dehydroge 99.6 4.5E-14 9.8E-19 113.8 12.8 123 7-136 5-146 (250)
146 PRK12742 oxidoreductase; Provi 99.6 7.8E-14 1.7E-18 111.7 14.1 121 4-134 1-133 (237)
147 PRK08085 gluconate 5-dehydroge 99.6 7.3E-14 1.6E-18 113.3 13.9 172 1-199 1-196 (254)
148 PLN02253 xanthoxin dehydrogena 99.6 9.6E-14 2.1E-18 114.2 14.6 121 6-133 15-155 (280)
149 PRK06198 short chain dehydroge 99.6 5.9E-14 1.3E-18 114.1 13.0 169 4-198 1-194 (260)
150 PRK08063 enoyl-(acyl carrier p 99.6 5.3E-14 1.1E-18 113.6 12.7 164 8-198 3-191 (250)
151 PRK07478 short chain dehydroge 99.6 1E-13 2.2E-18 112.5 14.3 123 7-136 4-146 (254)
152 PRK07102 short chain dehydroge 99.6 7E-14 1.5E-18 112.7 13.2 118 10-134 2-136 (243)
153 PRK12481 2-deoxy-D-gluconate 3 99.6 7.5E-14 1.6E-18 113.4 13.3 125 7-137 6-147 (251)
154 PRK05557 fabG 3-ketoacyl-(acyl 99.6 8.8E-14 1.9E-18 111.7 13.5 120 8-134 4-143 (248)
155 PRK12743 oxidoreductase; Provi 99.6 9.3E-14 2E-18 112.9 13.6 162 8-199 1-191 (256)
156 PRK05854 short chain dehydroge 99.5 1.9E-13 4.2E-18 114.6 15.2 126 4-137 9-154 (313)
157 PRK08213 gluconate 5-dehydroge 99.5 1.8E-13 4E-18 111.2 14.7 123 8-137 11-153 (259)
158 PRK05786 fabG 3-ketoacyl-(acyl 99.5 9.2E-14 2E-18 111.4 12.7 119 7-134 3-137 (238)
159 PRK06181 short chain dehydroge 99.5 1.1E-13 2.4E-18 112.7 13.3 120 10-137 2-141 (263)
160 PRK05866 short chain dehydroge 99.5 1.8E-13 4E-18 113.8 14.8 122 8-136 39-181 (293)
161 PRK06949 short chain dehydroge 99.5 1.1E-13 2.5E-18 112.2 13.1 164 6-199 6-204 (258)
162 PRK07074 short chain dehydroge 99.5 1.4E-13 2.9E-18 111.8 13.6 163 8-198 1-185 (257)
163 PRK06947 glucose-1-dehydrogena 99.5 1.1E-13 2.4E-18 111.7 12.9 122 8-135 1-145 (248)
164 PRK12824 acetoacetyl-CoA reduc 99.5 2.4E-13 5.2E-18 109.3 14.8 123 8-137 1-143 (245)
165 PRK07063 short chain dehydroge 99.5 1.3E-13 2.8E-18 112.2 13.2 122 7-135 5-147 (260)
166 PRK12936 3-ketoacyl-(acyl-carr 99.5 1.5E-13 3.4E-18 110.4 13.5 124 4-134 1-140 (245)
167 PF05368 NmrA: NmrA-like famil 99.5 8.3E-15 1.8E-19 117.6 5.8 143 12-198 1-149 (233)
168 PRK08226 short chain dehydroge 99.5 2.6E-13 5.7E-18 110.5 14.5 123 5-134 2-142 (263)
169 PRK08278 short chain dehydroge 99.5 4.1E-13 8.8E-18 110.4 15.7 108 5-118 2-135 (273)
170 PRK06114 short chain dehydroge 99.5 2.6E-13 5.7E-18 110.2 14.4 125 4-135 3-147 (254)
171 PRK09730 putative NAD(P)-bindi 99.5 1.6E-13 3.4E-18 110.5 13.0 165 10-199 2-194 (247)
172 PRK08589 short chain dehydroge 99.5 2.5E-13 5.4E-18 111.5 14.3 125 4-136 1-144 (272)
173 PRK07814 short chain dehydroge 99.5 2.7E-13 5.8E-18 110.7 14.4 121 8-134 9-148 (263)
174 PRK06057 short chain dehydroge 99.5 1.3E-13 2.8E-18 112.0 12.4 121 7-134 5-141 (255)
175 PRK12747 short chain dehydroge 99.5 2.8E-13 6.2E-18 109.7 14.2 162 8-198 3-195 (252)
176 PRK09134 short chain dehydroge 99.5 4.6E-13 1E-17 108.9 15.1 109 4-118 4-132 (258)
177 PRK07904 short chain dehydroge 99.5 5.6E-13 1.2E-17 108.5 15.6 116 9-135 8-148 (253)
178 PRK08277 D-mannonate oxidoredu 99.5 3.2E-13 6.9E-18 111.0 14.1 166 6-198 7-211 (278)
179 PRK05565 fabG 3-ketoacyl-(acyl 99.5 2E-13 4.4E-18 109.7 12.7 122 7-135 3-144 (247)
180 PRK06841 short chain dehydroge 99.5 3E-13 6.5E-18 109.6 13.6 122 7-135 13-150 (255)
181 PRK08339 short chain dehydroge 99.5 4.7E-13 1E-17 109.5 14.6 127 1-135 1-146 (263)
182 PRK06550 fabG 3-ketoacyl-(acyl 99.5 6.1E-13 1.3E-17 106.5 14.7 117 8-136 4-130 (235)
183 PRK12937 short chain dehydroge 99.5 5.4E-13 1.2E-17 107.3 14.4 118 8-134 4-141 (245)
184 PRK06200 2,3-dihydroxy-2,3-dih 99.5 2.7E-13 5.8E-18 110.6 12.7 125 5-137 2-147 (263)
185 PRK08993 2-deoxy-D-gluconate 3 99.5 4.6E-13 1E-17 108.7 14.1 125 7-137 8-149 (253)
186 PRK05650 short chain dehydroge 99.5 4.9E-13 1.1E-17 109.5 14.2 120 10-136 1-139 (270)
187 PRK06935 2-deoxy-D-gluconate 3 99.5 5.6E-13 1.2E-17 108.4 14.3 124 7-137 13-154 (258)
188 PRK06172 short chain dehydroge 99.5 4.7E-13 1E-17 108.4 13.8 123 8-137 6-148 (253)
189 PRK05867 short chain dehydroge 99.5 4E-13 8.7E-18 109.0 13.4 124 5-134 5-147 (253)
190 PRK06953 short chain dehydroge 99.5 5.4E-13 1.2E-17 106.2 13.9 117 10-134 2-131 (222)
191 PRK09242 tropinone reductase; 99.5 6.1E-13 1.3E-17 108.1 14.4 168 5-199 5-198 (257)
192 PRK07035 short chain dehydroge 99.5 4.8E-13 1E-17 108.3 13.7 124 4-134 3-146 (252)
193 PRK07023 short chain dehydroge 99.5 7E-13 1.5E-17 106.9 14.5 120 11-137 3-141 (243)
194 PRK08703 short chain dehydroge 99.5 1.1E-12 2.3E-17 105.5 15.2 121 6-133 3-147 (239)
195 PRK08177 short chain dehydroge 99.5 8.1E-13 1.8E-17 105.4 14.3 116 10-133 2-131 (225)
196 PRK08642 fabG 3-ketoacyl-(acyl 99.5 5E-13 1.1E-17 108.0 13.2 120 8-134 4-147 (253)
197 PRK08217 fabG 3-ketoacyl-(acyl 99.5 4.5E-13 9.9E-18 108.1 12.9 165 7-198 3-200 (253)
198 PRK06124 gluconate 5-dehydroge 99.5 6.9E-13 1.5E-17 107.6 14.0 164 8-198 10-197 (256)
199 PRK05872 short chain dehydroge 99.5 6.4E-13 1.4E-17 110.6 14.0 127 3-137 3-147 (296)
200 PRK12938 acetyacetyl-CoA reduc 99.5 1.1E-12 2.4E-17 105.7 14.8 119 9-134 3-141 (246)
201 PRK07062 short chain dehydroge 99.5 1.4E-12 2.9E-17 106.5 15.5 122 7-135 6-148 (265)
202 PRK12744 short chain dehydroge 99.5 1.7E-12 3.7E-17 105.5 16.0 105 8-118 7-134 (257)
203 PRK05855 short chain dehydroge 99.5 4.7E-13 1E-17 120.2 13.8 126 7-138 313-457 (582)
204 PRK06139 short chain dehydroge 99.5 6.6E-13 1.4E-17 112.3 13.8 123 7-136 5-146 (330)
205 PRK12748 3-ketoacyl-(acyl-carr 99.5 7.1E-13 1.5E-17 107.7 13.5 123 8-137 4-158 (256)
206 COG2910 Putative NADH-flavin r 99.5 1.4E-12 3E-17 99.2 13.9 156 10-200 1-163 (211)
207 PRK06483 dihydromonapterin red 99.5 1.4E-12 3E-17 104.7 14.6 121 8-134 1-136 (236)
208 PRK07109 short chain dehydroge 99.5 8.8E-13 1.9E-17 111.6 14.0 123 8-137 7-148 (334)
209 TIGR03325 BphB_TodD cis-2,3-di 99.5 1.2E-12 2.5E-17 106.8 14.2 119 8-134 4-143 (262)
210 PRK07097 gluconate 5-dehydroge 99.5 1.2E-12 2.5E-17 107.0 14.1 120 8-134 9-147 (265)
211 TIGR01830 3oxo_ACP_reduc 3-oxo 99.5 9.8E-13 2.1E-17 105.2 13.3 117 12-135 1-137 (239)
212 PRK07677 short chain dehydroge 99.5 1.6E-12 3.5E-17 105.4 14.6 120 9-134 1-139 (252)
213 PRK07832 short chain dehydroge 99.5 2.2E-12 4.8E-17 105.8 14.7 120 10-135 1-140 (272)
214 PRK07069 short chain dehydroge 99.5 2.8E-12 6.1E-17 103.5 15.1 116 11-137 1-142 (251)
215 PRK09072 short chain dehydroge 99.5 1.2E-12 2.6E-17 106.7 12.9 120 8-134 4-140 (263)
216 TIGR02415 23BDH acetoin reduct 99.5 1.8E-12 4E-17 104.8 13.8 119 10-134 1-138 (254)
217 PRK06924 short chain dehydroge 99.5 2.6E-12 5.6E-17 103.8 14.4 119 10-134 2-142 (251)
218 KOG1205 Predicted dehydrogenas 99.4 2.5E-12 5.5E-17 105.2 13.9 129 2-137 5-154 (282)
219 PRK06113 7-alpha-hydroxysteroi 99.4 3.2E-12 6.9E-17 103.8 14.4 121 8-135 10-148 (255)
220 PRK08416 7-alpha-hydroxysteroi 99.4 3.8E-12 8.2E-17 103.8 14.8 124 4-134 3-153 (260)
221 PRK07041 short chain dehydroge 99.4 9.1E-13 2E-17 105.2 10.5 113 13-137 1-128 (230)
222 TIGR01829 AcAcCoA_reduct aceto 99.4 3.1E-12 6.7E-17 102.6 13.6 118 10-134 1-138 (242)
223 PRK08324 short chain dehydroge 99.4 1.5E-12 3.2E-17 119.9 13.0 122 8-136 421-561 (681)
224 PRK06079 enoyl-(acyl carrier p 99.4 3.9E-12 8.4E-17 103.4 14.0 118 8-134 6-145 (252)
225 PRK07201 short chain dehydroge 99.4 1.9E-12 4.1E-17 118.5 13.2 124 7-137 369-513 (657)
226 PRK08936 glucose-1-dehydrogena 99.4 5.8E-12 1.2E-16 102.6 14.7 121 8-134 6-146 (261)
227 PRK07831 short chain dehydroge 99.4 4.5E-12 9.7E-17 103.3 13.9 120 8-133 16-157 (262)
228 PRK06484 short chain dehydroge 99.4 3E-12 6.4E-17 114.2 13.5 118 9-135 269-403 (520)
229 PRK05884 short chain dehydroge 99.4 4.2E-12 9.2E-17 101.4 12.2 114 11-133 2-131 (223)
230 PRK07578 short chain dehydroge 99.4 1.6E-11 3.5E-16 96.1 15.2 103 11-134 2-113 (199)
231 TIGR02632 RhaD_aldol-ADH rhamn 99.4 6.2E-12 1.3E-16 115.5 14.6 121 8-134 413-554 (676)
232 KOG4039 Serine/threonine kinas 99.4 7.6E-12 1.6E-16 94.6 12.2 154 8-199 17-174 (238)
233 PRK08945 putative oxoacyl-(acy 99.4 1.2E-11 2.6E-16 99.9 14.4 120 8-134 11-153 (247)
234 PRK06125 short chain dehydroge 99.4 1.4E-11 3E-16 100.3 14.8 118 8-133 6-140 (259)
235 PRK06505 enoyl-(acyl carrier p 99.4 8.6E-12 1.9E-16 102.6 13.5 118 8-134 6-147 (271)
236 PRK07533 enoyl-(acyl carrier p 99.4 1.2E-11 2.5E-16 100.9 14.0 124 1-133 2-149 (258)
237 KOG1221 Acyl-CoA reductase [Li 99.4 1.8E-11 3.8E-16 106.2 14.9 121 8-135 11-157 (467)
238 PRK09009 C factor cell-cell si 99.4 6.2E-11 1.4E-15 94.9 17.1 115 10-133 1-132 (235)
239 TIGR01831 fabG_rel 3-oxoacyl-( 99.4 9.2E-12 2E-16 99.9 12.2 117 12-135 1-138 (239)
240 PRK07791 short chain dehydroge 99.4 1.5E-11 3.3E-16 101.8 13.8 125 4-134 1-158 (286)
241 PRK12367 short chain dehydroge 99.4 6.1E-12 1.3E-16 102.1 10.9 106 3-118 6-121 (245)
242 smart00822 PKS_KR This enzymat 99.4 1.7E-11 3.7E-16 92.9 12.8 114 10-134 1-137 (180)
243 COG0702 Predicted nucleoside-d 99.4 1.3E-11 2.8E-16 100.8 12.8 147 10-197 1-147 (275)
244 TIGR01289 LPOR light-dependent 99.4 9.3E-12 2E-16 104.5 11.9 125 8-138 2-148 (314)
245 PRK07370 enoyl-(acyl carrier p 99.4 3.5E-11 7.7E-16 98.1 15.0 120 6-134 3-149 (258)
246 KOG2865 NADH:ubiquinone oxidor 99.4 3.7E-12 8E-17 103.0 8.8 151 11-200 63-220 (391)
247 KOG1372 GDP-mannose 4,6 dehydr 99.4 5.5E-12 1.2E-16 100.2 9.7 143 9-175 28-188 (376)
248 PLN02780 ketoreductase/ oxidor 99.3 2.6E-11 5.6E-16 102.1 14.3 121 9-136 53-196 (320)
249 PRK08340 glucose-1-dehydrogena 99.3 2.2E-11 4.8E-16 99.1 13.4 119 11-135 2-140 (259)
250 PRK07792 fabG 3-ketoacyl-(acyl 99.3 4.2E-11 9.2E-16 100.1 14.9 104 8-117 11-133 (306)
251 TIGR02685 pter_reduc_Leis pter 99.3 3.6E-11 7.7E-16 98.4 14.1 102 10-118 2-140 (267)
252 PRK06940 short chain dehydroge 99.3 1.3E-11 2.9E-16 101.6 11.4 104 8-119 1-115 (275)
253 PRK12859 3-ketoacyl-(acyl-carr 99.3 4.2E-11 9.1E-16 97.4 14.1 122 6-134 3-156 (256)
254 PRK07984 enoyl-(acyl carrier p 99.3 7.7E-11 1.7E-15 96.5 15.5 120 6-134 3-147 (262)
255 PRK08594 enoyl-(acyl carrier p 99.3 1E-10 2.2E-15 95.4 15.8 118 8-134 6-149 (257)
256 PRK06484 short chain dehydroge 99.3 2.8E-11 6.1E-16 107.9 13.3 121 8-134 4-142 (520)
257 PRK08690 enoyl-(acyl carrier p 99.3 7.2E-11 1.6E-15 96.4 14.6 120 7-134 4-148 (261)
258 PRK08303 short chain dehydroge 99.3 8.4E-11 1.8E-15 98.4 14.5 121 7-134 6-160 (305)
259 PRK08261 fabG 3-ketoacyl-(acyl 99.3 5.2E-11 1.1E-15 104.6 13.6 121 8-135 209-345 (450)
260 PRK08159 enoyl-(acyl carrier p 99.3 1.1E-10 2.4E-15 96.0 14.1 117 8-133 9-149 (272)
261 PRK07889 enoyl-(acyl carrier p 99.3 1.5E-10 3.2E-15 94.4 14.7 107 7-119 5-135 (256)
262 PF00106 adh_short: short chai 99.3 1.6E-11 3.6E-16 93.1 8.4 116 10-135 1-137 (167)
263 PRK06997 enoyl-(acyl carrier p 99.3 1.4E-10 3E-15 94.7 14.3 120 6-134 3-147 (260)
264 PRK08415 enoyl-(acyl carrier p 99.3 9.6E-11 2.1E-15 96.5 13.4 117 8-134 4-145 (274)
265 PRK07424 bifunctional sterol d 99.2 7.5E-11 1.6E-15 102.0 11.7 101 8-118 177-287 (406)
266 PRK08862 short chain dehydroge 99.2 2.2E-10 4.7E-15 91.9 13.3 120 8-133 4-144 (227)
267 PRK05599 hypothetical protein; 99.2 4.4E-10 9.4E-15 91.0 14.9 119 10-135 1-139 (246)
268 KOG1203 Predicted dehydrogenas 99.2 1.3E-10 2.9E-15 99.3 12.3 164 9-199 79-251 (411)
269 PRK06603 enoyl-(acyl carrier p 99.2 2.1E-10 4.5E-15 93.7 13.0 119 7-134 6-148 (260)
270 TIGR01500 sepiapter_red sepiap 99.2 2.6E-10 5.5E-15 92.7 13.3 122 11-134 2-152 (256)
271 KOG1208 Dehydrogenases with di 99.2 6.3E-10 1.4E-14 93.2 13.9 122 8-136 34-174 (314)
272 PLN00015 protochlorophyllide r 99.1 5.1E-10 1.1E-14 93.6 11.0 119 13-137 1-141 (308)
273 PF08659 KR: KR domain; Inter 99.1 7.9E-10 1.7E-14 85.7 10.8 115 11-135 2-138 (181)
274 COG3967 DltE Short-chain dehyd 99.1 1.1E-09 2.4E-14 84.9 11.2 164 8-197 4-188 (245)
275 KOG1611 Predicted short chain- 99.1 4.9E-09 1.1E-13 82.4 13.8 104 8-116 2-128 (249)
276 KOG1209 1-Acyl dihydroxyaceton 99.0 1.6E-09 3.5E-14 84.5 8.1 123 7-137 5-143 (289)
277 KOG1200 Mitochondrial/plastidi 99.0 4E-09 8.7E-14 81.2 9.6 120 8-134 13-152 (256)
278 KOG0725 Reductases with broad 99.0 2.6E-08 5.6E-13 82.0 15.1 124 5-135 4-152 (270)
279 KOG1210 Predicted 3-ketosphing 99.0 5.8E-09 1.3E-13 85.7 10.1 118 10-133 34-172 (331)
280 KOG1201 Hydroxysteroid 17-beta 99.0 9.2E-09 2E-13 84.2 11.2 123 8-137 37-177 (300)
281 TIGR02813 omega_3_PfaA polyket 98.9 1.3E-08 2.7E-13 104.0 13.9 118 8-135 1996-2178(2582)
282 COG1028 FabG Dehydrogenases wi 98.9 9.1E-09 2E-13 83.1 10.4 119 7-135 3-145 (251)
283 PLN02730 enoyl-[acyl-carrier-p 98.9 5.8E-08 1.3E-12 81.2 15.0 118 7-134 7-180 (303)
284 PRK12428 3-alpha-hydroxysteroi 98.9 1.6E-08 3.4E-13 81.6 10.0 101 25-138 1-102 (241)
285 PRK08309 short chain dehydroge 98.9 1.2E-08 2.6E-13 78.8 8.1 98 11-133 2-112 (177)
286 KOG4169 15-hydroxyprostaglandi 98.8 5.2E-08 1.1E-12 76.8 9.5 118 9-134 5-138 (261)
287 PRK06720 hypothetical protein; 98.7 2.5E-08 5.4E-13 76.5 6.4 80 8-93 15-104 (169)
288 PTZ00325 malate dehydrogenase; 98.7 3.1E-07 6.6E-12 77.3 12.8 115 8-135 7-127 (321)
289 PRK06300 enoyl-(acyl carrier p 98.7 1.7E-06 3.6E-11 72.3 16.5 117 7-133 6-178 (299)
290 cd01336 MDH_cytoplasmic_cytoso 98.7 2.6E-07 5.6E-12 78.0 11.2 104 10-118 3-117 (325)
291 KOG1610 Corticosteroid 11-beta 98.7 1.3E-06 2.9E-11 72.1 14.7 157 8-192 28-209 (322)
292 KOG4288 Predicted oxidoreducta 98.7 3.3E-08 7.2E-13 78.0 5.1 149 10-199 53-207 (283)
293 KOG1014 17 beta-hydroxysteroid 98.7 4.3E-08 9.3E-13 80.6 5.7 116 9-133 49-187 (312)
294 PLN00106 malate dehydrogenase 98.6 6.2E-07 1.3E-11 75.5 11.4 112 9-133 18-135 (323)
295 PRK09620 hypothetical protein; 98.5 3E-07 6.6E-12 73.8 7.7 79 8-94 2-99 (229)
296 PF13561 adh_short_C2: Enoyl-( 98.5 2.8E-07 6.2E-12 74.1 6.8 110 16-134 1-135 (241)
297 KOG1207 Diacetyl reductase/L-x 98.4 1.9E-07 4.2E-12 70.9 3.8 100 8-114 6-118 (245)
298 COG1748 LYS9 Saccharopine dehy 98.4 2E-06 4.4E-11 73.7 9.2 73 10-92 2-78 (389)
299 KOG2774 NAD dependent epimeras 98.3 8.9E-07 1.9E-11 70.4 5.5 115 9-138 44-164 (366)
300 PRK06732 phosphopantothenate-- 98.3 2.7E-06 5.8E-11 68.4 8.4 68 17-94 24-93 (229)
301 PRK05086 malate dehydrogenase; 98.3 7.8E-06 1.7E-10 68.7 11.3 110 10-133 1-118 (312)
302 TIGR00715 precor6x_red precorr 98.3 1E-05 2.2E-10 66.0 11.2 73 11-92 2-75 (256)
303 PRK05579 bifunctional phosphop 98.2 8.4E-06 1.8E-10 70.6 9.3 78 7-94 186-279 (399)
304 KOG1478 3-keto sterol reductas 98.2 1E-05 2.3E-10 65.0 8.5 85 7-92 1-99 (341)
305 cd00704 MDH Malate dehydrogena 98.2 3.2E-05 7E-10 65.3 11.9 98 11-118 2-115 (323)
306 PF03435 Saccharop_dh: Sacchar 98.2 1.1E-05 2.4E-10 69.6 9.1 72 12-93 1-78 (386)
307 TIGR01758 MDH_euk_cyt malate d 98.1 5E-05 1.1E-09 64.2 11.6 98 11-118 1-114 (324)
308 KOG1199 Short-chain alcohol de 98.1 3.8E-06 8.2E-11 63.8 3.9 106 8-119 8-135 (260)
309 PRK13656 trans-2-enoyl-CoA red 98.1 1.8E-05 3.9E-10 67.8 8.5 79 8-93 40-142 (398)
310 KOG1204 Predicted dehydrogenas 98.1 1.7E-05 3.8E-10 62.7 7.7 125 4-134 1-146 (253)
311 KOG3019 Predicted nucleoside-d 98.1 1.1E-05 2.4E-10 63.9 6.4 164 8-202 11-190 (315)
312 cd01078 NAD_bind_H4MPT_DH NADP 98.0 1.5E-05 3.2E-10 62.3 6.7 74 8-91 27-106 (194)
313 PRK14982 acyl-ACP reductase; P 97.9 1.4E-05 2.9E-10 67.7 3.7 73 8-94 154-227 (340)
314 TIGR02114 coaB_strep phosphopa 97.7 7.9E-05 1.7E-09 59.8 6.0 67 17-94 23-92 (227)
315 TIGR00521 coaBC_dfp phosphopan 97.7 0.00026 5.7E-09 61.2 9.0 78 7-94 183-277 (390)
316 PRK12548 shikimate 5-dehydroge 97.6 0.00018 4E-09 59.8 6.9 74 7-91 124-208 (289)
317 PLN02968 Probable N-acetyl-gam 97.6 0.00021 4.5E-09 61.7 7.3 39 8-50 37-75 (381)
318 KOG2733 Uncharacterized membra 97.6 0.00017 3.8E-09 60.6 6.0 78 9-92 5-93 (423)
319 cd01338 MDH_choloroplast_like 97.5 0.0019 4.1E-08 54.6 11.6 95 9-118 2-117 (322)
320 PRK05442 malate dehydrogenase; 97.4 0.0026 5.7E-08 53.8 11.6 100 9-118 4-119 (326)
321 TIGR01759 MalateDH-SF1 malate 97.3 0.0021 4.6E-08 54.3 10.0 97 10-118 4-118 (323)
322 cd05294 LDH-like_MDH_nadp A la 97.3 0.0018 3.8E-08 54.5 9.4 95 10-118 1-111 (309)
323 COG0623 FabI Enoyl-[acyl-carri 97.3 0.0056 1.2E-07 48.9 11.4 107 7-119 4-134 (259)
324 PRK00066 ldh L-lactate dehydro 97.2 0.0012 2.6E-08 55.6 7.0 92 9-118 6-112 (315)
325 PF00056 Ldh_1_N: lactate/mala 97.2 0.0016 3.5E-08 48.3 6.9 95 11-118 2-108 (141)
326 PRK14106 murD UDP-N-acetylmura 97.2 0.001 2.2E-08 58.6 6.7 72 7-94 3-80 (450)
327 PRK14874 aspartate-semialdehyd 97.1 0.0018 3.8E-08 55.1 7.6 35 10-49 2-39 (334)
328 PF01118 Semialdhyde_dh: Semia 97.1 0.0009 1.9E-08 48.2 4.5 34 11-48 1-35 (121)
329 cd01337 MDH_glyoxysomal_mitoch 97.1 0.0084 1.8E-07 50.4 10.8 96 11-118 2-107 (310)
330 TIGR01772 MDH_euk_gproteo mala 97.1 0.0078 1.7E-07 50.6 10.6 96 11-118 1-106 (312)
331 PRK00436 argC N-acetyl-gamma-g 97.1 0.0013 2.9E-08 56.0 6.0 34 10-47 3-36 (343)
332 PRK08664 aspartate-semialdehyd 97.0 0.0012 2.5E-08 56.5 5.4 38 7-48 1-38 (349)
333 cd05291 HicDH_like L-2-hydroxy 97.0 0.0071 1.5E-07 50.7 9.8 91 10-118 1-107 (306)
334 COG3268 Uncharacterized conser 97.0 0.00059 1.3E-08 57.0 3.1 78 4-93 1-82 (382)
335 PF04127 DFP: DNA / pantothena 97.0 0.0063 1.4E-07 47.3 8.6 78 8-95 2-95 (185)
336 PRK08057 cobalt-precorrin-6x r 96.9 0.027 5.8E-07 45.8 12.1 73 9-91 2-74 (248)
337 PRK09496 trkA potassium transp 96.8 0.0015 3.3E-08 57.4 4.7 69 11-90 2-73 (453)
338 PRK05671 aspartate-semialdehyd 96.8 0.0038 8.2E-08 53.1 6.8 21 10-30 5-25 (336)
339 COG0039 Mdh Malate/lactate deh 96.8 0.012 2.5E-07 49.4 9.4 95 10-118 1-108 (313)
340 TIGR01296 asd_B aspartate-semi 96.7 0.0042 9.2E-08 52.9 6.3 34 11-49 1-37 (339)
341 PF01113 DapB_N: Dihydrodipico 96.7 0.011 2.3E-07 42.9 7.6 34 11-48 2-36 (124)
342 COG0569 TrkA K+ transport syst 96.7 0.0031 6.7E-08 50.6 4.9 70 10-90 1-74 (225)
343 PF02254 TrkA_N: TrkA-N domain 96.7 0.0091 2E-07 42.2 6.9 69 12-90 1-70 (116)
344 KOG1494 NAD-dependent malate d 96.7 0.027 5.8E-07 46.3 10.1 111 9-132 28-145 (345)
345 PLN02819 lysine-ketoglutarate 96.6 0.0038 8.3E-08 60.1 5.7 72 9-90 569-656 (1042)
346 PF01488 Shikimate_DH: Shikima 96.6 0.00029 6.2E-09 51.9 -1.6 73 8-94 11-87 (135)
347 PLN00112 malate dehydrogenase 96.5 0.02 4.3E-07 50.4 9.3 99 10-117 101-214 (444)
348 PLN02602 lactate dehydrogenase 96.5 0.039 8.5E-07 47.2 10.9 94 10-118 38-144 (350)
349 KOG1198 Zinc-binding oxidoredu 96.5 0.0078 1.7E-07 51.4 6.3 79 8-93 157-236 (347)
350 TIGR01850 argC N-acetyl-gamma- 96.4 0.0082 1.8E-07 51.3 5.9 34 11-48 2-36 (346)
351 PTZ00082 L-lactate dehydrogena 96.2 0.074 1.6E-06 45.0 10.7 98 4-118 1-118 (321)
352 TIGR01915 npdG NADPH-dependent 96.2 0.0073 1.6E-07 48.1 4.3 35 11-50 2-36 (219)
353 cd00650 LDH_MDH_like NAD-depen 96.1 0.019 4E-07 47.1 6.6 92 12-118 1-109 (263)
354 PLN02383 aspartate semialdehyd 96.1 0.032 6.9E-07 47.6 7.9 23 8-30 6-28 (344)
355 PRK06849 hypothetical protein; 96.0 0.013 2.7E-07 50.8 5.4 38 7-49 2-39 (389)
356 PTZ00117 malate dehydrogenase; 96.0 0.073 1.6E-06 44.9 9.6 96 8-118 4-112 (319)
357 cd05290 LDH_3 A subgroup of L- 95.9 0.22 4.7E-06 41.9 12.1 90 11-118 1-109 (307)
358 PRK11863 N-acetyl-gamma-glutam 95.9 0.02 4.3E-07 48.2 5.7 37 8-48 1-37 (313)
359 PRK00048 dihydrodipicolinate r 95.8 0.1 2.2E-06 42.7 9.7 36 10-49 2-38 (257)
360 PRK09288 purT phosphoribosylgl 95.8 0.048 1E-06 47.1 8.2 71 9-89 12-82 (395)
361 cd05293 LDH_1 A subgroup of L- 95.8 0.11 2.3E-06 43.8 10.0 95 9-118 3-110 (312)
362 PRK06598 aspartate-semialdehyd 95.8 0.037 8.1E-07 47.6 7.2 34 10-47 2-38 (369)
363 PLN02948 phosphoribosylaminoim 95.8 0.063 1.4E-06 49.0 9.0 70 2-79 15-84 (577)
364 COG2085 Predicted dinucleotide 95.8 0.015 3.3E-07 45.8 4.3 35 10-50 2-36 (211)
365 PRK09496 trkA potassium transp 95.7 0.016 3.4E-07 51.0 4.8 71 9-89 231-304 (453)
366 cd08259 Zn_ADH5 Alcohol dehydr 95.7 0.015 3.2E-07 48.4 4.4 72 9-91 163-235 (332)
367 TIGR01757 Malate-DH_plant mala 95.7 0.085 1.8E-06 45.7 9.0 98 9-118 44-159 (387)
368 cd05292 LDH_2 A subgroup of L- 95.6 0.042 9E-07 46.2 6.7 90 11-118 2-106 (308)
369 TIGR01142 purT phosphoribosylg 95.6 0.065 1.4E-06 46.1 8.1 69 11-89 1-69 (380)
370 cd05295 MDH_like Malate dehydr 95.6 0.074 1.6E-06 46.9 8.3 98 9-118 123-238 (452)
371 COG0027 PurT Formate-dependent 95.5 0.056 1.2E-06 45.1 6.9 70 9-88 12-81 (394)
372 PRK04148 hypothetical protein; 95.5 0.0065 1.4E-07 44.6 1.3 54 9-70 17-71 (134)
373 PRK10669 putative cation:proto 95.5 0.013 2.8E-07 53.2 3.4 60 9-75 417-477 (558)
374 PRK06223 malate dehydrogenase; 95.4 0.11 2.4E-06 43.5 8.7 97 10-118 3-109 (307)
375 COG0604 Qor NADPH:quinone redu 95.4 0.021 4.5E-07 48.4 4.3 76 9-92 143-221 (326)
376 TIGR01763 MalateDH_bact malate 95.4 0.12 2.6E-06 43.4 8.8 97 10-118 2-108 (305)
377 PRK07688 thiamine/molybdopteri 95.4 0.14 3.1E-06 43.6 9.2 36 7-48 22-58 (339)
378 PRK03659 glutathione-regulated 95.3 0.085 1.8E-06 48.5 8.1 72 9-90 400-472 (601)
379 PRK08040 putative semialdehyde 95.3 0.044 9.5E-07 46.6 5.7 39 7-47 2-40 (336)
380 PRK06019 phosphoribosylaminoim 95.2 0.11 2.5E-06 44.7 8.4 62 10-79 3-64 (372)
381 PRK06728 aspartate-semialdehyd 95.2 0.11 2.5E-06 44.3 8.2 35 9-47 5-42 (347)
382 PRK11199 tyrA bifunctional cho 95.2 0.028 6.1E-07 48.5 4.5 35 9-48 98-132 (374)
383 TIGR02853 spore_dpaA dipicolin 95.2 0.022 4.7E-07 47.4 3.6 37 8-50 150-186 (287)
384 PRK03562 glutathione-regulated 95.1 0.1 2.2E-06 48.1 8.2 72 9-90 400-472 (621)
385 PRK08306 dipicolinate synthase 95.1 0.025 5.4E-07 47.3 3.7 67 8-90 151-218 (296)
386 cd00300 LDH_like L-lactate deh 95.0 0.04 8.7E-07 46.1 4.9 90 12-118 1-105 (300)
387 TIGR00518 alaDH alanine dehydr 95.0 0.049 1.1E-06 47.0 5.3 74 8-92 166-240 (370)
388 PRK10537 voltage-gated potassi 94.9 0.08 1.7E-06 46.0 6.5 59 9-75 240-298 (393)
389 PRK08655 prephenate dehydrogen 94.9 0.038 8.2E-07 48.7 4.5 35 11-50 2-36 (437)
390 KOG4022 Dihydropteridine reduc 94.8 0.27 5.9E-06 37.4 8.2 36 9-49 3-38 (236)
391 PRK14618 NAD(P)H-dependent gly 94.8 0.046 1E-06 46.1 4.7 38 4-49 1-38 (328)
392 COG0002 ArgC Acetylglutamate s 94.8 0.043 9.2E-07 46.5 4.3 36 9-48 2-37 (349)
393 PRK02472 murD UDP-N-acetylmura 94.7 0.048 1E-06 47.9 4.8 36 8-49 4-39 (447)
394 PRK00258 aroE shikimate 5-dehy 94.7 0.055 1.2E-06 44.7 4.8 37 8-50 122-159 (278)
395 TIGR02825 B4_12hDH leukotriene 94.7 0.043 9.2E-07 45.9 4.3 37 9-50 139-175 (325)
396 COG1004 Ugd Predicted UDP-gluc 94.7 0.1 2.3E-06 45.0 6.4 34 11-50 2-35 (414)
397 PRK06129 3-hydroxyacyl-CoA deh 94.6 0.048 1E-06 45.7 4.2 34 10-49 3-36 (308)
398 cd08294 leukotriene_B4_DH_like 94.5 0.065 1.4E-06 44.6 4.8 37 9-50 144-180 (329)
399 PF02571 CbiJ: Precorrin-6x re 94.5 0.77 1.7E-05 37.4 10.8 71 10-90 1-74 (249)
400 TIGR00978 asd_EA aspartate-sem 94.5 0.06 1.3E-06 45.9 4.6 31 11-45 2-32 (341)
401 cd01075 NAD_bind_Leu_Phe_Val_D 94.4 0.083 1.8E-06 41.5 5.0 37 7-49 26-62 (200)
402 cd01080 NAD_bind_m-THF_DH_Cycl 94.4 0.086 1.9E-06 40.3 4.9 35 8-47 43-77 (168)
403 KOG0172 Lysine-ketoglutarate r 94.4 0.063 1.4E-06 46.1 4.4 67 8-80 1-70 (445)
404 PRK07530 3-hydroxybutyryl-CoA 94.4 0.061 1.3E-06 44.6 4.4 38 7-50 2-39 (292)
405 PRK15469 ghrA bifunctional gly 94.3 0.23 5E-06 41.8 7.7 36 8-49 135-170 (312)
406 TIGR01771 L-LDH-NAD L-lactate 94.3 0.32 7E-06 40.7 8.5 87 14-118 1-103 (299)
407 PRK13982 bifunctional SbtC-lik 94.3 0.39 8.4E-06 42.8 9.3 77 7-94 254-346 (475)
408 PLN02735 carbamoyl-phosphate s 94.2 0.3 6.4E-06 48.1 9.2 73 9-89 23-105 (1102)
409 PRK08818 prephenate dehydrogen 94.2 0.091 2E-06 45.3 5.2 35 9-47 4-38 (370)
410 COG0289 DapB Dihydrodipicolina 94.2 0.43 9.2E-06 39.0 8.6 36 10-49 3-39 (266)
411 PRK07236 hypothetical protein; 94.2 0.098 2.1E-06 45.0 5.4 40 4-49 1-40 (386)
412 PF00070 Pyr_redox: Pyridine n 94.1 0.13 2.7E-06 33.9 4.7 34 11-50 1-34 (80)
413 PRK08229 2-dehydropantoate 2-r 94.1 0.082 1.8E-06 44.7 4.6 33 10-48 3-35 (341)
414 cd01065 NAD_bind_Shikimate_DH 94.1 0.096 2.1E-06 38.9 4.5 36 9-50 19-55 (155)
415 TIGR00507 aroE shikimate 5-deh 94.1 0.087 1.9E-06 43.3 4.6 36 9-50 117-152 (270)
416 PRK06249 2-dehydropantoate 2-r 94.1 0.11 2.3E-06 43.7 5.2 34 10-49 6-39 (313)
417 PF02826 2-Hacid_dh_C: D-isome 94.1 0.1 2.3E-06 40.1 4.8 37 8-50 35-71 (178)
418 TIGR01745 asd_gamma aspartate- 94.0 0.17 3.7E-06 43.5 6.4 27 10-40 1-27 (366)
419 PF10727 Rossmann-like: Rossma 94.0 0.084 1.8E-06 38.5 3.9 83 5-94 6-108 (127)
420 PLN02928 oxidoreductase family 94.0 0.2 4.4E-06 42.8 6.8 35 8-48 158-192 (347)
421 PLN02520 bifunctional 3-dehydr 94.0 0.097 2.1E-06 47.3 5.1 36 8-49 378-413 (529)
422 COG0136 Asd Aspartate-semialde 93.9 0.074 1.6E-06 44.9 4.0 22 10-31 2-23 (334)
423 cd08266 Zn_ADH_like1 Alcohol d 93.9 0.14 3E-06 42.5 5.6 77 8-91 166-244 (342)
424 COG0287 TyrA Prephenate dehydr 93.8 0.093 2E-06 43.5 4.3 35 9-49 3-37 (279)
425 PF02737 3HCDH_N: 3-hydroxyacy 93.8 0.076 1.6E-06 41.0 3.6 34 11-50 1-34 (180)
426 PLN00203 glutamyl-tRNA reducta 93.8 0.058 1.3E-06 48.5 3.3 36 9-50 266-302 (519)
427 TIGR01035 hemA glutamyl-tRNA r 93.8 0.071 1.5E-06 46.7 3.8 70 8-93 179-251 (417)
428 PRK06130 3-hydroxybutyryl-CoA 93.7 0.12 2.6E-06 43.3 4.9 36 9-50 4-39 (311)
429 PRK11064 wecC UDP-N-acetyl-D-m 93.7 0.093 2E-06 46.0 4.4 35 10-50 4-38 (415)
430 cd08253 zeta_crystallin Zeta-c 93.7 0.11 2.5E-06 42.6 4.7 77 8-91 144-222 (325)
431 TIGR01851 argC_other N-acetyl- 93.7 0.13 2.9E-06 43.1 5.0 34 10-47 2-35 (310)
432 PRK07502 cyclohexadienyl dehyd 93.6 0.12 2.6E-06 43.2 4.8 37 7-49 4-42 (307)
433 PRK13940 glutamyl-tRNA reducta 93.6 0.051 1.1E-06 47.6 2.6 71 8-94 180-254 (414)
434 smart00859 Semialdhyde_dh Semi 93.6 0.14 3E-06 36.6 4.5 33 11-47 1-34 (122)
435 PF03446 NAD_binding_2: NAD bi 93.6 0.088 1.9E-06 39.8 3.6 62 10-78 2-77 (163)
436 PF13380 CoA_binding_2: CoA bi 93.6 0.26 5.7E-06 35.2 5.9 34 10-48 1-37 (116)
437 PRK07819 3-hydroxybutyryl-CoA 93.5 0.11 2.5E-06 43.0 4.5 35 10-50 6-40 (286)
438 PRK08591 acetyl-CoA carboxylas 93.5 0.41 8.8E-06 42.2 8.2 70 9-88 2-80 (451)
439 PRK14192 bifunctional 5,10-met 93.5 0.15 3.2E-06 42.4 5.0 34 8-46 158-191 (283)
440 KOG0023 Alcohol dehydrogenase, 93.5 0.34 7.4E-06 40.8 7.0 65 8-80 181-248 (360)
441 PRK14619 NAD(P)H-dependent gly 93.5 0.15 3.3E-06 42.7 5.1 35 9-49 4-38 (308)
442 cd05213 NAD_bind_Glutamyl_tRNA 93.5 0.073 1.6E-06 44.7 3.2 71 8-93 177-249 (311)
443 PRK06111 acetyl-CoA carboxylas 93.5 0.41 8.8E-06 42.2 8.1 72 8-88 1-80 (450)
444 COG2130 Putative NADP-dependen 93.4 0.2 4.2E-06 41.9 5.5 75 9-91 151-228 (340)
445 PLN02545 3-hydroxybutyryl-CoA 93.4 0.14 3.1E-06 42.5 4.8 35 10-50 5-39 (295)
446 TIGR00877 purD phosphoribosyla 93.3 0.23 4.9E-06 43.4 6.2 69 10-87 1-69 (423)
447 PRK12833 acetyl-CoA carboxylas 93.3 0.57 1.2E-05 41.7 8.7 70 9-87 5-82 (467)
448 PLN02256 arogenate dehydrogena 93.3 0.17 3.7E-06 42.4 5.1 37 7-49 34-70 (304)
449 PRK12815 carB carbamoyl phosph 93.2 0.47 1E-05 46.6 8.7 73 9-89 7-89 (1068)
450 PRK00045 hemA glutamyl-tRNA re 93.2 0.086 1.9E-06 46.3 3.4 37 8-50 181-218 (423)
451 PRK06718 precorrin-2 dehydroge 93.2 0.16 3.4E-06 40.0 4.5 37 6-48 7-43 (202)
452 PRK06444 prephenate dehydrogen 93.2 0.12 2.6E-06 40.6 3.8 27 11-42 2-28 (197)
453 PRK14188 bifunctional 5,10-met 93.1 0.18 3.9E-06 42.2 4.9 35 8-47 157-192 (296)
454 PRK09260 3-hydroxybutyryl-CoA 93.1 0.11 2.3E-06 43.1 3.6 35 10-50 2-36 (288)
455 PRK07066 3-hydroxybutyryl-CoA 93.1 0.2 4.4E-06 42.3 5.2 35 9-49 7-41 (321)
456 PRK14194 bifunctional 5,10-met 93.0 0.17 3.8E-06 42.2 4.8 36 8-48 158-193 (301)
457 PRK11559 garR tartronate semia 92.9 0.15 3.3E-06 42.2 4.4 34 10-49 3-36 (296)
458 TIGR00514 accC acetyl-CoA carb 92.9 0.56 1.2E-05 41.4 8.1 70 9-88 2-80 (449)
459 cd05188 MDR Medium chain reduc 92.9 0.13 2.7E-06 41.2 3.7 36 8-49 134-169 (271)
460 PRK05294 carB carbamoyl phosph 92.9 0.66 1.4E-05 45.6 9.2 73 9-89 7-89 (1066)
461 PF12242 Eno-Rase_NADH_b: NAD( 92.9 0.31 6.7E-06 32.0 4.7 32 9-46 39-72 (78)
462 PF13241 NAD_binding_7: Putati 92.9 0.25 5.3E-06 34.4 4.7 37 6-48 4-40 (103)
463 PRK12409 D-amino acid dehydrog 92.9 0.19 4.1E-06 43.6 5.0 33 10-48 2-34 (410)
464 TIGR01161 purK phosphoribosyla 92.8 0.37 8.1E-06 41.0 6.7 61 11-79 1-61 (352)
465 cd08295 double_bond_reductase_ 92.8 0.17 3.8E-06 42.5 4.6 37 9-50 152-188 (338)
466 PRK12475 thiamine/molybdopteri 92.8 1.3 2.8E-05 37.7 9.9 36 7-48 22-58 (338)
467 PF03721 UDPG_MGDP_dh_N: UDP-g 92.8 0.11 2.4E-06 40.4 3.0 34 10-49 1-34 (185)
468 cd05288 PGDH Prostaglandin deh 92.7 0.23 5E-06 41.3 5.2 36 9-49 146-181 (329)
469 PRK06395 phosphoribosylamine-- 92.6 0.75 1.6E-05 40.6 8.4 72 8-89 1-72 (435)
470 TIGR02355 moeB molybdopterin s 92.5 1.9 4.1E-05 34.9 9.9 36 8-49 23-59 (240)
471 PRK06035 3-hydroxyacyl-CoA deh 92.5 0.22 4.8E-06 41.3 4.7 35 10-50 4-38 (291)
472 cd01339 LDH-like_MDH L-lactate 92.4 0.6 1.3E-05 38.9 7.3 90 12-118 1-105 (300)
473 PRK08773 2-octaprenyl-3-methyl 92.4 0.28 6.2E-06 42.2 5.5 40 4-49 1-40 (392)
474 PRK06719 precorrin-2 dehydroge 92.4 0.26 5.7E-06 37.2 4.6 33 8-46 12-44 (157)
475 PRK12767 carbamoyl phosphate s 92.4 0.47 1E-05 39.7 6.7 35 10-50 2-37 (326)
476 COG0111 SerA Phosphoglycerate 92.4 0.44 9.6E-06 40.4 6.4 34 8-47 141-174 (324)
477 KOG1202 Animal-type fatty acid 92.3 0.44 9.5E-06 46.7 6.8 119 8-135 1767-1907(2376)
478 cd01492 Aos1_SUMO Ubiquitin ac 92.3 0.21 4.6E-06 39.1 4.1 35 8-48 20-55 (197)
479 PLN02775 Probable dihydrodipic 92.2 5.6 0.00012 33.1 12.4 35 9-48 11-46 (286)
480 PRK14175 bifunctional 5,10-met 92.1 0.31 6.7E-06 40.5 5.0 35 8-47 157-191 (286)
481 PF02844 GARS_N: Phosphoribosy 92.1 1.3 2.7E-05 30.9 7.3 67 11-88 2-68 (100)
482 COG2099 CobK Precorrin-6x redu 92.0 4 8.8E-05 33.2 11.1 72 9-89 2-73 (257)
483 PRK07531 bifunctional 3-hydrox 92.0 0.28 6E-06 44.0 5.0 35 10-50 5-39 (495)
484 PRK05808 3-hydroxybutyryl-CoA 91.9 0.21 4.6E-06 41.2 3.9 35 10-50 4-38 (282)
485 COG0026 PurK Phosphoribosylami 91.9 0.89 1.9E-05 39.0 7.6 63 10-80 2-64 (375)
486 PRK11880 pyrroline-5-carboxyla 91.8 0.25 5.5E-06 40.3 4.2 35 10-50 3-40 (267)
487 PRK06522 2-dehydropantoate 2-r 91.8 0.26 5.7E-06 40.7 4.4 33 11-49 2-34 (304)
488 cd00755 YgdL_like Family of ac 91.8 1.1 2.4E-05 36.1 7.8 36 6-47 8-44 (231)
489 PRK07417 arogenate dehydrogena 91.8 0.24 5.2E-06 40.9 4.1 33 11-49 2-34 (279)
490 PRK08410 2-hydroxyacid dehydro 91.7 0.96 2.1E-05 38.1 7.7 36 7-48 143-178 (311)
491 COG1052 LdhA Lactate dehydroge 91.7 0.76 1.7E-05 38.9 7.0 36 8-49 145-180 (324)
492 PF03807 F420_oxidored: NADP o 91.6 0.3 6.6E-06 33.1 3.9 34 11-50 1-38 (96)
493 PRK09880 L-idonate 5-dehydroge 91.6 0.27 5.9E-06 41.5 4.4 75 8-92 169-245 (343)
494 PRK08293 3-hydroxybutyryl-CoA 91.6 0.34 7.4E-06 40.1 4.8 34 10-49 4-37 (287)
495 cd08293 PTGR2 Prostaglandin re 91.5 0.28 6.2E-06 41.2 4.4 36 10-50 156-192 (345)
496 TIGR02356 adenyl_thiF thiazole 91.5 0.31 6.7E-06 38.3 4.3 35 7-47 19-54 (202)
497 PRK13243 glyoxylate reductase; 91.5 0.36 7.9E-06 41.0 5.0 36 8-49 149-184 (333)
498 PRK07574 formate dehydrogenase 91.4 0.39 8.4E-06 41.7 5.1 35 8-48 191-225 (385)
499 PRK08163 salicylate hydroxylas 91.4 0.37 8E-06 41.4 5.0 36 8-49 3-38 (396)
500 PRK06185 hypothetical protein; 91.3 0.34 7.3E-06 41.9 4.7 40 4-49 1-40 (407)
No 1
>COG1087 GalE UDP-glucose 4-epimerase [Cell envelope biogenesis, outer membrane]
Probab=99.94 E-value=4.1e-26 Score=184.53 Aligned_cols=164 Identities=15% Similarity=0.125 Sum_probs=134.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCC-ceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTAL-VDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++||||||+||||+|.|.+|+ +.||+|+++++-..... ..... .+ ++.+|+.|.+.+.+.|+..+ |+.|+
T Consensus 1 ~~iLVtGGAGYIGSHtv~~Ll-----~~G~~vvV~DNL~~g~~~~v~~~~~~-f~~gDi~D~~~L~~vf~~~~--idaVi 72 (329)
T COG1087 1 MKVLVTGGAGYIGSHTVRQLL-----KTGHEVVVLDNLSNGHKIALLKLQFK-FYEGDLLDRALLTAVFEENK--IDAVV 72 (329)
T ss_pred CeEEEecCcchhHHHHHHHHH-----HCCCeEEEEecCCCCCHHHhhhccCc-eEEeccccHHHHHHHHHhcC--CCEEE
Confidence 469999999999999999999 79999999998544321 11111 57 99999999999999999876 89999
Q ss_pred eecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 88 WVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 88 ~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|+|+... ..+.++++.|+.+|.+|+++|+++ ++++|+|+||+.+||.|. ..|++|+.|
T Consensus 73 HFAa~~~VgESv~~Pl~Yy~NNv~gTl~Ll~am~~~-----gv~~~vFSStAavYG~p~------------~~PI~E~~~ 135 (329)
T COG1087 73 HFAASISVGESVQNPLKYYDNNVVGTLNLIEAMLQT-----GVKKFIFSSTAAVYGEPT------------TSPISETSP 135 (329)
T ss_pred ECccccccchhhhCHHHHHhhchHhHHHHHHHHHHh-----CCCEEEEecchhhcCCCC------------CcccCCCCC
Confidence 9998754 367789999999999999999998 789999999999999763 579999998
Q ss_pred CCCCCCcch-----hHHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 163 RLPFPNFYY-----ELEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 163 ~~~~~~~~~-----~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.. |...| ..|+.|.+ ...+|+++++|-+++-|..+.
T Consensus 136 ~~--p~NPYG~sKlm~E~iL~d~~~a~~~~~v~LRYFN~aGA~~~ 178 (329)
T COG1087 136 LA--PINPYGRSKLMSEEILRDAAKANPFKVVILRYFNVAGACPD 178 (329)
T ss_pred CC--CCCcchhHHHHHHHHHHHHHHhCCCcEEEEEecccccCCCC
Confidence 64 43333 34666665 567799999999998888764
No 2
>PF01073 3Beta_HSD: 3-beta hydroxysteroid dehydrogenase/isomerase family; InterPro: IPR002225 The enzyme 3 beta-hydroxysteroid dehydrogenase/5-ene-4-ene isomerase (3 beta-HSD) catalyses the oxidation and isomerisation of 5-ene-3 beta-hydroxypregnene and 5-ene-hydroxyandrostene steroid precursors into the corresponding 4-ene-ketosteroids necessary for the formation of all classes of steroid hormones. 3Beta_HSD; GO: 0003854 3-beta-hydroxy-delta5-steroid dehydrogenase activity, 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0006694 steroid biosynthetic process, 0055114 oxidation-reduction process
Probab=99.94 E-value=2.2e-25 Score=184.09 Aligned_cols=170 Identities=19% Similarity=0.215 Sum_probs=125.1
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
||||||||+|++|+++|+ ++| ++|.+++|++.... ...+..+ ++.+|++|++++.+++++ +|.|
T Consensus 1 LVTGgsGflG~~iv~~Ll-----~~g~~~~Vr~~d~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~a~~g----~d~V 70 (280)
T PF01073_consen 1 LVTGGSGFLGSHIVRQLL-----ERGYIYEVRVLDRSPPPKFLKDLQKSGVKE-YIQGDITDPESLEEALEG----VDVV 70 (280)
T ss_pred CEEcCCcHHHHHHHHHHH-----HCCCceEEEEcccccccccchhhhccccee-EEEeccccHHHHHHHhcC----CceE
Confidence 699999999999999999 577 78999998765432 1224455 889999999999999998 5789
Q ss_pred EeecccCCc----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 87 FWVPLQVQE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 87 ~~~a~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
||+|+.... ..+..+++|+.||+|++++|++. ++++|||+||..+++.... +. +-...+|+.|
T Consensus 71 ~H~Aa~~~~~~~~~~~~~~~vNV~GT~nvl~aa~~~-----~VkrlVytSS~~vv~~~~~-----~~---~~~~~dE~~~ 137 (280)
T PF01073_consen 71 FHTAAPVPPWGDYPPEEYYKVNVDGTRNVLEAARKA-----GVKRLVYTSSISVVFDNYK-----GD---PIINGDEDTP 137 (280)
T ss_pred EEeCccccccCcccHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEcCcceeEeccC-----CC---CcccCCcCCc
Confidence 999986432 45568899999999999999987 7999999999998864110 10 0112356555
Q ss_pred CCCCCCcchhHHHHHhh------cC------CCceEEEecCCceEecCCCCCCCC
Q 028258 163 RLPFPNFYYELEDVSAS------YS------PAITYSVHRSSVIIGASPRSLYXX 205 (211)
Q Consensus 163 ~~~~~~~~~~~e~~l~~------~~------~~~~~~i~Rp~~i~G~~~~~~~~~ 205 (211)
....+...|...|.+.| .. ..+.+++|||+.||||+...+...
T Consensus 138 ~~~~~~~~Y~~SK~~AE~~V~~a~~~~~~~g~~l~t~~lRP~~IyGp~d~~~~~~ 192 (280)
T PF01073_consen 138 YPSSPLDPYAESKALAEKAVLEANGSELKNGGRLRTCALRPAGIYGPGDQRLVPR 192 (280)
T ss_pred ccccccCchHHHHHHHHHHHHhhcccccccccceeEEEEeccEEeCcccccccch
Confidence 43333445554444433 11 248999999999999998665443
No 3
>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional
Probab=99.93 E-value=4.8e-25 Score=187.32 Aligned_cols=163 Identities=16% Similarity=0.046 Sum_probs=123.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.+|+|||||||||||++|+++|+ ++|++|++++|...... .....++ ++.+|+.|.+.+...
T Consensus 14 ~~~~vlVtGatGfiG~~lv~~L~-----~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Di~d~~~l~~~ 87 (348)
T PRK15181 14 APKRWLITGVAGFIGSGLLEELL-----FLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFI-FIQGDIRKFTDCQKA 87 (348)
T ss_pred cCCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCcchhhhhhhhhccccccCCceE-EEEccCCCHHHHHHH
Confidence 34789999999999999999999 68999999998643210 0013578 899999999888888
Q ss_pred HHhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+++ +|+|||+|+... .++...+++|+.++.++++++++. ++++|+++||+.+|+...
T Consensus 88 ~~~----~d~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~nll~~~~~~-----~~~~~v~~SS~~vyg~~~--------- 149 (348)
T PRK15181 88 CKN----VDYVLHQAALGSVPRSLKDPIATNSANIDGFLNMLTAARDA-----HVSSFTYAASSSTYGDHP--------- 149 (348)
T ss_pred hhC----CCEEEECccccCchhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeechHhhCCCC---------
Confidence 775 789999998643 234567899999999999999886 678999999999997421
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.+..|+++. .|...|...| ++.. ...+++++++||+.+|||+.
T Consensus 150 ---~~~~~e~~~~--~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~lR~~~vyGp~~ 200 (348)
T PRK15181 150 ---DLPKIEERIG--RPLSPYAVTKYVNELYADVFARSYEFNAIGLRYFNVFGRRQ 200 (348)
T ss_pred ---CCCCCCCCCC--CCCChhhHHHHHHHHHHHHHHHHhCCCEEEEEecceeCcCC
Confidence 2445565543 2333344333 3332 34689999999999999975
No 4
>PLN02214 cinnamoyl-CoA reductase
Probab=99.91 E-value=2.2e-23 Score=176.76 Aligned_cols=169 Identities=14% Similarity=0.136 Sum_probs=126.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++++|||||||||||++|+++|+ ++||+|+++.|+..... . ....++ ++.+|++|++.+.+++++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~- 81 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILL-----ERGYTVKGTVRNPDDPKNTHLRELEGGKERLI-LCKADLQDYEALKAAIDG- 81 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCcCEEEEEeCCchhhhHHHHHHhhCCCCcEE-EEecCcCChHHHHHHHhc-
Confidence 45789999999999999999999 68999999999755310 0 113578 899999999999988886
Q ss_pred ccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC-eeeecccCCccccCCCCCCCCCCc
Q 028258 80 SQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT-KHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~-~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
+|+|||+|+....++...+++|+.++.++++++.+. ++++|+++||. .+|+.+.. . ...+++
T Consensus 82 ---~d~Vih~A~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~v~r~V~~SS~~avyg~~~~-----~----~~~~~~ 144 (342)
T PLN02214 82 ---CDGVFHTASPVTDDPEQMVEPAVNGAKFVINAAAEA-----KVKRVVITSSIGAVYMDPNR-----D----PEAVVD 144 (342)
T ss_pred ---CCEEEEecCCCCCCHHHHHHHHHHHHHHHHHHHHhc-----CCCEEEEeccceeeeccCCC-----C----CCcccC
Confidence 689999998766677788899999999999999886 57899999985 68874321 0 112456
Q ss_pred CCCCCC----CCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 159 EDSSRL----PFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 159 e~~~~~----~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
|+++.. ..|...|...| ++.. +..+++++++||+.+|||+..
T Consensus 145 E~~~~~~~~~~~p~~~Y~~sK~~aE~~~~~~~~~~g~~~v~lRp~~vyGp~~~ 197 (342)
T PLN02214 145 ESCWSDLDFCKNTKNWYCYGKMVAEQAAWETAKEKGVDLVVLNPVLVLGPPLQ 197 (342)
T ss_pred cccCCChhhccccccHHHHHHHHHHHHHHHHHHHcCCcEEEEeCCceECCCCC
Confidence 664210 11333444433 3333 346999999999999999753
No 5
>KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms]
Probab=99.91 E-value=1.5e-23 Score=173.08 Aligned_cols=177 Identities=17% Similarity=0.166 Sum_probs=130.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++++|+|||||||||+||+++|+ .+||.|+++.|++.... + ...+++ .+..|++|++++.+
T Consensus 1 m~~~~~~~VcVTGAsGfIgswivk~LL-----~rGY~V~gtVR~~~~~k~~~~L~~l~~a~~~l~-l~~aDL~d~~sf~~ 74 (327)
T KOG1502|consen 1 MDQDEGKKVCVTGASGFIGSWIVKLLL-----SRGYTVRGTVRDPEDEKKTEHLRKLEGAKERLK-LFKADLLDEGSFDK 74 (327)
T ss_pred CCCCCCcEEEEeCCchHHHHHHHHHHH-----hCCCEEEEEEcCcchhhhHHHHHhcccCcccce-EEeccccccchHHH
Confidence 344467899999999999999999999 79999999999887521 1 234588 99999999999999
Q ss_pred HHHhcccccceEEeecccCCc----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 75 KLSLISQEITNLFWVPLQVQE----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~~----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++++ +|.|||+|..... .+.+..+..+.|+.|++++|.+. . .++|||++||...-..+.. ..+
T Consensus 75 ai~g----cdgVfH~Asp~~~~~~~~e~~li~pav~Gt~nVL~ac~~~---~-sVkrvV~TSS~aAv~~~~~---~~~-- 141 (327)
T KOG1502|consen 75 AIDG----CDGVFHTASPVDFDLEDPEKELIDPAVKGTKNVLEACKKT---K-SVKRVVYTSSTAAVRYNGP---NIG-- 141 (327)
T ss_pred HHhC----CCEEEEeCccCCCCCCCcHHhhhhHHHHHHHHHHHHHhcc---C-CcceEEEeccHHHhccCCc---CCC--
Confidence 9998 6889999987543 23367888999999999999997 3 6999999998654321100 111
Q ss_pred CCCCCCCcCCCCCCC----CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCCC
Q 028258 151 MPYEVPFKEDSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~----~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~~ 201 (211)
....++|++-... .....|...|.+.| .+.+++.+++.|+.|+||..-.
T Consensus 142 --~~~vvdE~~wsd~~~~~~~~~~Y~~sK~lAEkaAw~fa~e~~~~lv~inP~lV~GP~l~~ 201 (327)
T KOG1502|consen 142 --ENSVVDEESWSDLDFCRCKKLWYALSKTLAEKAAWEFAKENGLDLVTINPGLVFGPGLQP 201 (327)
T ss_pred --CCcccccccCCcHHHHHhhHHHHHHHHHHHHHHHHHHHHhCCccEEEecCCceECCCccc
Confidence 2345666552100 01234554454444 3568999999999999998744
No 6
>PRK09987 dTDP-4-dehydrorhamnose reductase; Provisional
Probab=99.91 E-value=2.4e-23 Score=173.43 Aligned_cols=153 Identities=15% Similarity=0.150 Sum_probs=117.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+||||||+||||++++++|+ +.| +|++++|+.. .+.+|++|++.+.+.+++.+ +|.|||||
T Consensus 2 ~iLVtG~~GfiGs~l~~~L~-----~~g-~V~~~~~~~~-----------~~~~Dl~d~~~~~~~~~~~~--~D~Vih~A 62 (299)
T PRK09987 2 NILLFGKTGQVGWELQRALA-----PLG-NLIALDVHST-----------DYCGDFSNPEGVAETVRKIR--PDVIVNAA 62 (299)
T ss_pred eEEEECCCCHHHHHHHHHhh-----ccC-CEEEeccccc-----------cccCCCCCHHHHHHHHHhcC--CCEEEECC
Confidence 69999999999999999999 577 6988887632 44689999999999988764 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... ++...+++|+.++.++++++++. +. +++++||..+|++.. ..|++|+++.
T Consensus 63 a~~~~~~~~~~~~~~~~~N~~~~~~l~~aa~~~-----g~-~~v~~Ss~~Vy~~~~------------~~p~~E~~~~-- 122 (299)
T PRK09987 63 AHTAVDKAESEPEFAQLLNATSVEAIAKAANEV-----GA-WVVHYSTDYVFPGTG------------DIPWQETDAT-- 122 (299)
T ss_pred ccCCcchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEccceEECCCC------------CCCcCCCCCC--
Confidence 87543 33456789999999999999987 33 689999999997531 3578888763
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
.|...|...|+..| .....+++|+||+++|||+..++
T Consensus 123 ~P~~~Yg~sK~~~E~~~~~~~~~~~ilR~~~vyGp~~~~~ 162 (299)
T PRK09987 123 APLNVYGETKLAGEKALQEHCAKHLIFRTSWVYAGKGNNF 162 (299)
T ss_pred CCCCHHHHHHHHHHHHHHHhCCCEEEEecceecCCCCCCH
Confidence 34455554454444 22345789999999999875443
No 7
>PLN00198 anthocyanidin reductase; Provisional
Probab=99.90 E-value=1.3e-22 Score=171.40 Aligned_cols=178 Identities=17% Similarity=0.144 Sum_probs=125.3
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C-CCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F-PTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~-~~~~~~~~i~~Dl~d~~~~ 72 (211)
|.-.+.+++++|||||||||||++|+++|+ ++|++|+++.|+..... . ..++++ ++.+|++|++.+
T Consensus 1 ~~~~~~~~~~~vlItG~~GfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~ 74 (338)
T PLN00198 1 MATLTPTGKKTACVIGGTGFLASLLIKLLL-----QKGYAVNTTVRDPENQKKIAHLRALQELGDLK-IFGADLTDEESF 74 (338)
T ss_pred CCcccCCCCCeEEEECCchHHHHHHHHHHH-----HCCCEEEEEECCCCCHHHHHHHHhcCCCCceE-EEEcCCCChHHH
Confidence 444556667899999999999999999999 68999999988754310 1 113588 999999999988
Q ss_pred HHHHHhcccccceEEeecccCC---chh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 73 ALKLSLISQEITNLFWVPLQVQ---ESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a~~~~---~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+.+++ +|+|||+|+... .++ ...+++|+.++.++++++.+. .++++|+++||..+|+.... .+
T Consensus 75 ~~~~~~----~d~vih~A~~~~~~~~~~~~~~~~~nv~g~~~ll~a~~~~----~~~~~~v~~SS~~~~g~~~~----~~ 142 (338)
T PLN00198 75 EAPIAG----CDLVFHVATPVNFASEDPENDMIKPAIQGVHNVLKACAKA----KSVKRVILTSSAAAVSINKL----SG 142 (338)
T ss_pred HHHHhc----CCEEEEeCCCCccCCCChHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEeecceeeeccCC----CC
Confidence 888875 689999998632 122 235689999999999999875 24789999999999974210 01
Q ss_pred CCCCCCCCCcCCCC-------CCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 149 QLMPYEVPFKEDSS-------RLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 149 ~~~~~~~~~~e~~~-------~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. ..+.+|+.. ....|...|...| ++.. +..+++++++||+.+|||+.+
T Consensus 143 ~----~~~~~E~~~~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~~R~~~vyGp~~~ 204 (338)
T PLN00198 143 T----GLVMNEKNWTDVEFLTSEKPPTWGYPASKTLAEKAAWKFAEENNIDLITVIPTLMAGPSLT 204 (338)
T ss_pred C----CceeccccCCchhhhhhcCCccchhHHHHHHHHHHHHHHHHhcCceEEEEeCCceECCCcc
Confidence 0 123333310 0012333344433 3333 346899999999999999753
No 8
>PLN02572 UDP-sulfoquinovose synthase
Probab=99.90 E-value=8e-23 Score=178.72 Aligned_cols=171 Identities=16% Similarity=0.065 Sum_probs=119.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---CCC---------------------CCCCCceeEEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP---PGW---------------------FPTALVDRYIT 63 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---~~~---------------------~~~~~~~~~i~ 63 (211)
++++|||||||||||++|+++|+ ++|++|++++|... ... ....+++ ++.
T Consensus 46 ~~k~VLVTGatGfIGs~Lv~~L~-----~~G~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~v~-~v~ 119 (442)
T PLN02572 46 KKKKVMVIGGDGYCGWATALHLS-----KRGYEVAIVDNLCRRLFDHQLGLDSLTPIASIHERVRRWKEVSGKEIE-LYV 119 (442)
T ss_pred cCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeccccccccccccccccccccchHHHHHHHHHhhCCcce-EEE
Confidence 45789999999999999999999 68999999875221 100 0013688 999
Q ss_pred eeCCCHHHHHHHHHhcccccceEEeecccCCc-----h---hHHHHhhcHHHHHHHHHHHHhcCCCCCCce-EEEEeecC
Q 028258 64 FDALDPTDTALKLSLISQEITNLFWVPLQVQE-----S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLR-HVALLTGT 134 (211)
Q Consensus 64 ~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~~-----~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~-~~~~~s~~ 134 (211)
+|++|++.+.+++++.. +|+|||+|+.... + +...+++|+.++.+++++++.. +++ +|+++||.
T Consensus 120 ~Dl~d~~~v~~~l~~~~--~D~ViHlAa~~~~~~~~~~~~~~~~~~~~Nv~gt~nlleaa~~~-----gv~~~~V~~SS~ 192 (442)
T PLN02572 120 GDICDFEFLSEAFKSFE--PDAVVHFGEQRSAPYSMIDRSRAVFTQHNNVIGTLNVLFAIKEF-----APDCHLVKLGTM 192 (442)
T ss_pred CCCCCHHHHHHHHHhCC--CCEEEECCCcccChhhhcChhhHHHHHHHHHHHHHHHHHHHHHh-----CCCccEEEEecc
Confidence 99999999999998764 7999999976332 1 1234688999999999999886 454 89999999
Q ss_pred eeeecccCCccccCCCCCCCCCCc------CCCC-CCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 135 KHYMGPIFDPSLAGQLMPYEVPFK------EDSS-RLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 135 ~~y~~~~~~~~~~g~~~~~~~~~~------e~~~-~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+||.+.. .. ++.+++ |+++ ....|...|...|...+ +..+++++++||+.+|||+.
T Consensus 193 ~vYG~~~~---~~-----~E~~i~~~~~~~e~~~~~~~~P~s~Yg~SK~a~E~l~~~~~~~~gl~~v~lR~~~vyGp~~ 263 (442)
T PLN02572 193 GEYGTPNI---DI-----EEGYITITHNGRTDTLPYPKQASSFYHLSKVHDSHNIAFTCKAWGIRATDLNQGVVYGVRT 263 (442)
T ss_pred eecCCCCC---CC-----cccccccccccccccccCCCCCCCcchhHHHHHHHHHHHHHHhcCCCEEEEecccccCCCC
Confidence 99985311 00 111221 2221 11223334444333322 35699999999999999975
No 9
>PLN02427 UDP-apiose/xylose synthase
Probab=99.90 E-value=9.4e-23 Score=175.43 Aligned_cols=169 Identities=14% Similarity=0.096 Sum_probs=117.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++|||||||||||++|+++|+ ++ |++|++++|+..+.. ...++++ ++.+|++|.+.+.+++++
T Consensus 14 ~~~VlVTGgtGfIGs~lv~~L~-----~~~g~~V~~l~r~~~~~~~l~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~~~- 86 (386)
T PLN02427 14 PLTICMIGAGGFIGSHLCEKLM-----TETPHKVLALDVYNDKIKHLLEPDTVPWSGRIQ-FHRINIKHDSRLEGLIKM- 86 (386)
T ss_pred CcEEEEECCcchHHHHHHHHHH-----hcCCCEEEEEecCchhhhhhhccccccCCCCeE-EEEcCCCChHHHHHHhhc-
Confidence 4579999999999999999999 45 699999998654211 0124689 999999999998888875
Q ss_pred ccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+.... ++.+.+..|+.++.++++++++. + ++|+++||..+||.....+ .. ..
T Consensus 87 ---~d~ViHlAa~~~~~~~~~~~~~~~~~n~~gt~~ll~aa~~~-----~-~r~v~~SS~~vYg~~~~~~--~~----e~ 151 (386)
T PLN02427 87 ---ADLTINLAAICTPADYNTRPLDTIYSNFIDALPVVKYCSEN-----N-KRLIHFSTCEVYGKTIGSF--LP----KD 151 (386)
T ss_pred ---CCEEEEcccccChhhhhhChHHHHHHHHHHHHHHHHHHHhc-----C-CEEEEEeeeeeeCCCcCCC--CC----cc
Confidence 6899999986432 23355678999999999999875 3 6899999999998531100 00 01
Q ss_pred CCC---------cCCCCCC---C--CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 155 VPF---------KEDSSRL---P--FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~---------~e~~~~~---~--~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|. +|+.+.. + .+.+.|...|...+ +..+++++++||+.+||++.
T Consensus 152 ~p~~~~~~~~~~~e~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 217 (386)
T PLN02427 152 HPLRQDPAFYVLKEDESPCIFGSIEKQRWSYACAKQLIERLIYAEGAENGLEFTIVRPFNWIGPRM 217 (386)
T ss_pred cccccccccccccccccccccCCCCccccchHHHHHHHHHHHHHHHhhcCCceEEecccceeCCCC
Confidence 121 2221100 0 12233444343333 34689999999999999973
No 10
>PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional
Probab=99.90 E-value=6.6e-23 Score=173.94 Aligned_cols=163 Identities=14% Similarity=0.184 Sum_probs=118.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCC-CHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDAL-DPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~-d~~~~~~~~~~~~~~~~~v 86 (211)
++|||||||||||++|+++|++ +.||+|++++|+.... ....++++ ++.+|++ +.+.+.+++++ +|+|
T Consensus 2 ~~ilVtGatGfiGs~l~~~L~~----~~~~~V~~~~r~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~----~d~V 72 (347)
T PRK11908 2 KKVLILGVNGFIGHHLSKRILE----TTDWEVYGMDMQTDRLGDLVNHPRMH-FFEGDITINKEWIEYHVKK----CDVI 72 (347)
T ss_pred cEEEEECCCcHHHHHHHHHHHh----CCCCeEEEEeCcHHHHHHhccCCCeE-EEeCCCCCCHHHHHHHHcC----CCEE
Confidence 4699999999999999999993 3479999999865421 11235688 9999998 66666666664 7899
Q ss_pred EeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 87 FWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 87 ~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
||+|+...+ ++...+++|+.++.++++++++. + ++|+++||+.+||... ..+++|+.
T Consensus 73 iH~aa~~~~~~~~~~p~~~~~~n~~~~~~ll~aa~~~-----~-~~~v~~SS~~vyg~~~------------~~~~~ee~ 134 (347)
T PRK11908 73 LPLVAIATPATYVKQPLRVFELDFEANLPIVRSAVKY-----G-KHLVFPSTSEVYGMCP------------DEEFDPEA 134 (347)
T ss_pred EECcccCChHHhhcCcHHHHHHHHHHHHHHHHHHHhc-----C-CeEEEEecceeeccCC------------CcCcCccc
Confidence 999986432 45567899999999999999875 3 6899999999997421 12445543
Q ss_pred CCC-----CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 162 SRL-----PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~-----~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.. ..|...|...|...+ +..+++++++||+.+||++.
T Consensus 135 ~~~~~~~~~~p~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~v~Gp~~ 184 (347)
T PRK11908 135 SPLVYGPINKPRWIYACSKQLMDRVIWAYGMEEGLNFTLFRPFNWIGPGL 184 (347)
T ss_pred cccccCcCCCccchHHHHHHHHHHHHHHHHHHcCCCeEEEeeeeeeCCCc
Confidence 211 123444554444333 35789999999999999975
No 11
>PLN02695 GDP-D-mannose-3',5'-epimerase
Probab=99.90 E-value=9.5e-23 Score=174.63 Aligned_cols=171 Identities=15% Similarity=0.102 Sum_probs=122.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++.+|+|||||||||||++++++|. ++||+|++++|+...... .....+ ++.+|++|.+.+...+++ +|
T Consensus 18 ~~~~~~IlVtGgtGfIG~~l~~~L~-----~~G~~V~~v~r~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~----~D 87 (370)
T PLN02695 18 PSEKLRICITGAGGFIASHIARRLK-----AEGHYIIASDWKKNEHMSEDMFCHE-FHLVDLRVMENCLKVTKG----VD 87 (370)
T ss_pred CCCCCEEEEECCccHHHHHHHHHHH-----hCCCEEEEEEeccccccccccccce-EEECCCCCHHHHHHHHhC----CC
Confidence 4457889999999999999999999 689999999986542111 112357 889999999887777764 78
Q ss_pred eEEeecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 85 NLFWVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 85 ~v~~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
+|||+|+... .++...+..|+.++.++++++++. ++++|+++||+.+|+.... . +...++.
T Consensus 88 ~Vih~Aa~~~~~~~~~~~~~~~~~~N~~~t~nll~aa~~~-----~vk~~V~~SS~~vYg~~~~-----~---~~~~~~~ 154 (370)
T PLN02695 88 HVFNLAADMGGMGFIQSNHSVIMYNNTMISFNMLEAARIN-----GVKRFFYASSACIYPEFKQ-----L---ETNVSLK 154 (370)
T ss_pred EEEEcccccCCccccccCchhhHHHHHHHHHHHHHHHHHh-----CCCEEEEeCchhhcCCccc-----c---CcCCCcC
Confidence 9999997542 133445678999999999999876 6789999999999974210 0 0123456
Q ss_pred CCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 159 EDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 159 e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|+.+....|...|.. |.++.. ...+++++++||+.+|||..
T Consensus 155 E~~~~p~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 202 (370)
T PLN02695 155 ESDAWPAEPQDAYGLEKLATEELCKHYTKDFGIECRIGRFHNIYGPFG 202 (370)
T ss_pred cccCCCCCCCCHHHHHHHHHHHHHHHHHHHhCCCEEEEEECCccCCCC
Confidence 654211233444443 333322 34689999999999999864
No 12
>PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor. The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B ....
Probab=99.90 E-value=2.9e-23 Score=166.11 Aligned_cols=160 Identities=20% Similarity=0.215 Sum_probs=127.2
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCC--CCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFP--TALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~--~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
|||||||||||++++++|+ ++|++|+.+.|+..+.... ..+++ ++.+|+.|.+.+.+.++... +|.|||+
T Consensus 1 IlI~GatG~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~-~~~~dl~~~~~~~~~~~~~~--~d~vi~~ 72 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLL-----KKGHEVIVLSRSSNSESFEEKKLNVE-FVIGDLTDKEQLEKLLEKAN--IDVVIHL 72 (236)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTTEEEEEESCSTGGHHHHHHTTEE-EEESETTSHHHHHHHHHHHT--ESEEEEE
T ss_pred EEEEccCCHHHHHHHHHHH-----HcCCccccccccccccccccccceEE-EEEeeccccccccccccccC--ceEEEEe
Confidence 7999999999999999999 7999999999987753211 12788 99999999999999999874 8999999
Q ss_pred cccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 90 PLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 90 a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|+.... +....++.|+.++.++++++.+. ++++|+++||..+|+.+. ..+++|+++.
T Consensus 73 a~~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~sS~~~y~~~~------------~~~~~e~~~~- 134 (236)
T PF01370_consen 73 AAFSSNPESFEDPEEIIEANVQGTRNLLEAAREA-----GVKRFIFLSSASVYGDPD------------GEPIDEDSPI- 134 (236)
T ss_dssp BSSSSHHHHHHSHHHHHHHHHHHHHHHHHHHHHH-----TTSEEEEEEEGGGGTSSS------------SSSBETTSGC-
T ss_pred eccccccccccccccccccccccccccccccccc-----cccccccccccccccccc------------cccccccccc-
Confidence 987531 34567788999999999999987 568999999999997531 3567888875
Q ss_pred CCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecC
Q 028258 165 PFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 165 ~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.|...|...| ++.+ +..+++++++||+.+||+.
T Consensus 135 -~~~~~Y~~~K~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~ 174 (236)
T PF01370_consen 135 -NPLSPYGASKRAAEELLRDYAKKYGLRVTILRPPNVYGPG 174 (236)
T ss_dssp -CHSSHHHHHHHHHHHHHHHHHHHHTSEEEEEEESEEESTT
T ss_pred -cccccccccccccccccccccccccccccccccccccccc
Confidence 3444454433 3333 2348999999999999998
No 13
>PLN02650 dihydroflavonol-4-reductase
Probab=99.90 E-value=2.8e-22 Score=170.37 Aligned_cols=169 Identities=13% Similarity=0.151 Sum_probs=120.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|+|||||||||||++++++|+ ++|++|++++|++.... . ....++ ++.+|++|++.+.+.++
T Consensus 3 ~~~k~iLVTGatGfIGs~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~~~~~~~ 76 (351)
T PLN02650 3 SQKETVCVTGASGFIGSWLVMRLL-----ERGYTVRATVRDPANVKKVKHLLDLPGATTRLT-LWKADLAVEGSFDDAIR 76 (351)
T ss_pred CCCCEEEEeCCcHHHHHHHHHHHH-----HCCCEEEEEEcCcchhHHHHHHHhccCCCCceE-EEEecCCChhhHHHHHh
Confidence 456899999999999999999999 68999999998764321 0 013578 89999999998888887
Q ss_pred hcccccceEEeecccCCc---h-hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 78 LISQEITNLFWVPLQVQE---S-EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~-~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+ +|+|||+|+.... + +...+++|+.++.++++++.+. ..+++|+++||..+|+....
T Consensus 77 ~----~d~ViH~A~~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~----~~~~r~v~~SS~~~~~~~~~----------- 137 (351)
T PLN02650 77 G----CTGVFHVATPMDFESKDPENEVIKPTVNGMLSIMKACAKA----KTVRRIVFTSSAGTVNVEEH----------- 137 (351)
T ss_pred C----CCEEEEeCCCCCCCCCCchhhhhhHHHHHHHHHHHHHHhc----CCceEEEEecchhhcccCCC-----------
Confidence 5 6899999976431 2 2357799999999999999876 13689999999876653210
Q ss_pred CCC-CcCCCCC-------CCCCCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCCC
Q 028258 154 EVP-FKEDSSR-------LPFPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 154 ~~~-~~e~~~~-------~~~~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..+ ++|+... .+.+...|...|. +.. +..+++++++||+++|||...
T Consensus 138 ~~~~~~E~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~gi~~~ilRp~~v~Gp~~~ 199 (351)
T PLN02650 138 QKPVYDEDCWSDLDFCRRKKMTGWMYFVSKTLAEKAAWKYAAENGLDFISIIPTLVVGPFIS 199 (351)
T ss_pred CCCccCcccCCchhhhhccccccchHHHHHHHHHHHHHHHHHHcCCeEEEECCCceECCCCC
Confidence 112 3443210 0112233443333 332 356999999999999999753
No 14
>PLN02989 cinnamyl-alcohol dehydrogenase family protein
Probab=99.89 E-value=6.1e-22 Score=166.41 Aligned_cols=171 Identities=17% Similarity=0.162 Sum_probs=124.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|++|||||+||||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++.+.+++++
T Consensus 5 ~k~vlVtG~~G~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~- 77 (325)
T PLN02989 5 GKVVCVTGASGYIASWIVKLLL-----FRGYTINATVRDPKDRKKTDHLLALDGAKERLK-LFKADLLDEGSFELAIDG- 77 (325)
T ss_pred CCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEEcCCcchhhHHHHHhccCCCCceE-EEeCCCCCchHHHHHHcC-
Confidence 5899999999999999999999 68999999888765321 0 114678 899999999988888875
Q ss_pred ccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+|+|||+|+... ..+...+++|+.++.++++++.+. . +.++|+++||...|+++.. ..+ ..
T Consensus 78 ---~d~vih~A~~~~~~~~~~~~~~~~~~n~~g~~~ll~a~~~~---~-~~~~iv~~SS~~~~~~~~~---~~~----~~ 143 (325)
T PLN02989 78 ---CETVFHTASPVAITVKTDPQVELINPAVNGTINVLRTCTKV---S-SVKRVILTSSMAAVLAPET---KLG----PN 143 (325)
T ss_pred ---CCEEEEeCCCCCCCCCCChHHHHHHHHHHHHHHHHHHHHHc---C-CceEEEEecchhheecCCc---cCC----CC
Confidence 689999998632 234567799999999999999875 1 4678999999877764311 001 12
Q ss_pred CCCcCCCCCCCC----CCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 155 VPFKEDSSRLPF----PNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 155 ~~~~e~~~~~~~----~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+++|+.+..+. +...|.. |.++.. +..+++++++||+.+|||+..
T Consensus 144 ~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 200 (325)
T PLN02989 144 DVVDETFFTNPSFAEERKQWYVLSKTLAEDAAWRFAKDNEIDLIVLNPGLVTGPILQ 200 (325)
T ss_pred CccCcCCCCchhHhcccccchHHHHHHHHHHHHHHHHHcCCeEEEEcCCceeCCCCC
Confidence 456777664321 1233433 333333 346899999999999999753
No 15
>PLN02986 cinnamyl-alcohol dehydrogenase family protein
Probab=99.89 E-value=1e-21 Score=164.86 Aligned_cols=168 Identities=15% Similarity=0.100 Sum_probs=121.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|+|||||||||||++++++|+ ++||+|+++.|+..... . ....++ ++.+|++|++.+.+++++
T Consensus 5 ~~~vlVTGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~- 77 (322)
T PLN02986 5 GKLVCVTGASGYIASWIVKLLL-----LRGYTVKATVRDLTDRKKTEHLLALDGAKERLK-LFKADLLEESSFEQAIEG- 77 (322)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCCcchHHHHHHHhccCCCCceE-EEecCCCCcchHHHHHhC-
Confidence 5899999999999999999999 68999999998765311 0 124688 999999999998888875
Q ss_pred ccccceEEeecccCCc---hh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee--ecccCCccccCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE---SE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY--MGPIFDPSLAGQLMPY 153 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y--~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+.... ++ ...+++|+.++.++++++.+. .++++|+++||...| +.+.. . .
T Consensus 78 ---~d~vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~~~~~~----~~v~rvV~~SS~~~~~~~~~~~-----~----~ 141 (322)
T PLN02986 78 ---CDAVFHTASPVFFTVKDPQTELIDPALKGTINVLNTCKET----PSVKRVILTSSTAAVLFRQPPI-----E----A 141 (322)
T ss_pred ---CCEEEEeCCCcCCCCCCchhhhhHHHHHHHHHHHHHHHhc----CCccEEEEecchhheecCCccC-----C----C
Confidence 6899999986422 22 345789999999999999874 257899999997654 22110 0 1
Q ss_pred CCCCcCCCCCCC----CCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLP----FPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~----~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+..+ .+...|...|...+ +..+++++++||+.+|||..
T Consensus 142 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~aE~~~~~~~~~~~~~~~~lrp~~v~Gp~~ 198 (322)
T PLN02986 142 NDVVDETFFSDPSLCRETKNWYPLSKILAENAAWEFAKDNGIDMVVLNPGFICGPLL 198 (322)
T ss_pred CCCcCcccCCChHHhhccccchHHHHHHHHHHHHHHHHHhCCeEEEEcccceeCCCC
Confidence 234666654221 12333444333332 34689999999999999964
No 16
>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.
Probab=99.89 E-value=7.1e-22 Score=167.80 Aligned_cols=166 Identities=20% Similarity=0.149 Sum_probs=123.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|+|||||||||||++++++|+ ++|++|++++|++.... . ....++ ++.+|++|.+++.+.++..+
T Consensus 4 ~k~ilItGatG~IG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~-- 75 (349)
T TIGR02622 4 GKKVLVTGHTGFKGSWLSLWLL-----ELGAEVYGYSLDPPTSPNLFELLNLAKKIE-DHFGDIRDAAKLRKAIAEFK-- 75 (349)
T ss_pred CCEEEEECCCChhHHHHHHHHH-----HCCCEEEEEeCCCccchhHHHHHhhcCCce-EEEccCCCHHHHHHHHhhcC--
Confidence 5789999999999999999999 68999999998765321 0 123577 88999999999999988764
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++...+++|+.++.++++++... + .+++|+++||+.+|+.+. ...++
T Consensus 76 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~g~~~ll~a~~~~---~-~~~~iv~~SS~~vyg~~~-----------~~~~~ 140 (349)
T TIGR02622 76 PEIVFHLAAQPLVRKSYADPLETFETNVMGTVNLLEAIRAI---G-SVKAVVNVTSDKCYRNDE-----------WVWGY 140 (349)
T ss_pred CCEEEECCcccccccchhCHHHHHHHhHHHHHHHHHHHHhc---C-CCCEEEEEechhhhCCCC-----------CCCCC
Confidence 799999998532 245567899999999999999765 2 367899999999997431 12356
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh--c-C------CCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS--Y-S------PAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~--~-~------~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+.+.. |...|. .|.++.. . . ++++++++||+.+|||+.
T Consensus 141 ~e~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~i~~~~lR~~~vyGp~~ 194 (349)
T TIGR02622 141 RETDPLG--GHDPYSSSKACAELVIASYRSSFFGVANFHGIKIASARAGNVIGGGD 194 (349)
T ss_pred ccCCCCC--CCCcchhHHHHHHHHHHHHHHHhhcccccCCCcEEEEccCcccCCCc
Confidence 6666532 222233 3333332 1 1 389999999999999864
No 17
>COG0451 WcaG Nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.89 E-value=8.5e-22 Score=163.94 Aligned_cols=162 Identities=16% Similarity=0.123 Sum_probs=121.3
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|||||||||||++|+++|+ ++||+|++++|...+.......++ ++.+|++|.+...+..+.. .|.|+|+++
T Consensus 3 ILVtG~tGfiG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~---~d~vih~aa 73 (314)
T COG0451 3 ILVTGGAGFIGSHLVERLL-----AAGHDVRGLDRLRDGLDPLLSGVE-FVVLDLTDRDLVDELAKGV---PDAVIHLAA 73 (314)
T ss_pred EEEEcCcccHHHHHHHHHH-----hCCCeEEEEeCCCccccccccccc-eeeecccchHHHHHHHhcC---CCEEEEccc
Confidence 9999999999999999999 679999999997765432225678 9999999987666666653 188999998
Q ss_pred cCCch------hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC-CCCC
Q 028258 92 QVQES------EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED-SSRL 164 (211)
Q Consensus 92 ~~~~~------~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~-~~~~ 164 (211)
..... +.+.+++|+.++.++++++++. ++++|++.||..+|+.+ . ...+++|+ .+.
T Consensus 74 ~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~-----~~~~~v~~ss~~~~~~~-~----------~~~~~~E~~~~~- 136 (314)
T COG0451 74 QSSVPDSNASDPAEFLDVNVDGTLNLLEAARAA-----GVKRFVFASSVSVVYGD-P----------PPLPIDEDLGPP- 136 (314)
T ss_pred cCchhhhhhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCeEEEeCCCceECCC-C----------CCCCcccccCCC-
Confidence 76531 2347899999999999999985 68899997777777643 1 12367777 342
Q ss_pred CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 165 PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 165 ~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|...|.. |+++.+ ...+++++++||+.+||++..
T Consensus 137 -~p~~~Yg~sK~~~E~~~~~~~~~~~~~~~ilR~~~vyGp~~~ 178 (314)
T COG0451 137 -RPLNPYGVSKLAAEQLLRAYARLYGLPVVILRPFNVYGPGDK 178 (314)
T ss_pred -CCCCHHHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCCC
Confidence 23324544 444433 235899999999999999874
No 18
>PRK10217 dTDP-glucose 4,6-dehydratase; Provisional
Probab=99.89 E-value=8.1e-22 Score=167.53 Aligned_cols=170 Identities=12% Similarity=0.063 Sum_probs=121.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPG--W-----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|||||||||||++++++|+ ++|+++++ ++|..... . .....++ ++.+|++|.+.+.+.+++..
T Consensus 2 ~~vlVtGatGfIG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~- 74 (355)
T PRK10217 2 RKILITGGAGFIGSALVRYII-----NETSDAVVVVDKLTYAGNLMSLAPVAQSERFA-FEKVDICDRAELARVFTEHQ- 74 (355)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----HcCCCEEEEEecCccccchhhhhhcccCCceE-EEECCCcChHHHHHHHhhcC-
Confidence 679999999999999999999 68887554 44432211 0 0123577 88999999999999988753
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcC----CCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSN----SGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~----~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+|+.... .+...+++|+.++.++++++.+.+ ....++++|+++||..+|+... +
T Consensus 75 -~D~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~a~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~------~---- 143 (355)
T PRK10217 75 -PDCVMHLAAESHVDRSIDGPAAFIETNIVGTYTLLEAARAYWNALTEDKKSAFRFHHISTDEVYGDLH------S---- 143 (355)
T ss_pred -CCEEEECCcccCcchhhhChHHHHHHhhHHHHHHHHHHHHhhhcccccccCceEEEEecchhhcCCCC------C----
Confidence 7999999987432 345678999999999999997520 0012467899999999997421 1
Q ss_pred CCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|++|+.+.. |...|.. |.++.. +..+++++++||+.+|||+.
T Consensus 144 ~~~~~~E~~~~~--p~s~Y~~sK~~~e~~~~~~~~~~~~~~~i~r~~~v~Gp~~ 195 (355)
T PRK10217 144 TDDFFTETTPYA--PSSPYSASKASSDHLVRAWLRTYGLPTLITNCSNNYGPYH 195 (355)
T ss_pred CCCCcCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCeEEEeeeeeeCCCC
Confidence 134677877642 3333443 333333 35789999999999999975
No 19
>PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated
Probab=99.88 E-value=5.7e-22 Score=181.17 Aligned_cols=164 Identities=15% Similarity=0.189 Sum_probs=121.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHH-HHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDALDPTD-TALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~-~~~~~~~~~~~~~~ 85 (211)
.++|||||||||||++|+++|++ +.||+|++++|.+... .....+++ ++.+|++|.+. +.+++++ +|+
T Consensus 315 ~~~VLVTGatGFIGs~Lv~~Ll~----~~g~~V~~l~r~~~~~~~~~~~~~~~-~~~gDl~d~~~~l~~~l~~----~D~ 385 (660)
T PRK08125 315 RTRVLILGVNGFIGNHLTERLLR----DDNYEVYGLDIGSDAISRFLGHPRFH-FVEGDISIHSEWIEYHIKK----CDV 385 (660)
T ss_pred CCEEEEECCCchHHHHHHHHHHh----CCCcEEEEEeCCchhhhhhcCCCceE-EEeccccCcHHHHHHHhcC----CCE
Confidence 46799999999999999999993 3479999999976532 11235788 99999998755 4556654 799
Q ss_pred EEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCC
Q 028258 86 LFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKED 160 (211)
Q Consensus 86 v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~ 160 (211)
|||+|+.... ++...+++|+.++.++++++.+. + ++|+++||..+||.+. ..+++|+
T Consensus 386 ViHlAa~~~~~~~~~~~~~~~~~Nv~~t~~ll~a~~~~-----~-~~~V~~SS~~vyg~~~------------~~~~~E~ 447 (660)
T PRK08125 386 VLPLVAIATPIEYTRNPLRVFELDFEENLKIIRYCVKY-----N-KRIIFPSTSEVYGMCT------------DKYFDED 447 (660)
T ss_pred EEECccccCchhhccCHHHHHHhhHHHHHHHHHHHHhc-----C-CeEEEEcchhhcCCCC------------CCCcCcc
Confidence 9999986442 34567789999999999999986 4 6899999999997421 2456776
Q ss_pred CCCC---C--CCCcchhHHHH-----Hhh--cCCCceEEEecCCceEecCC
Q 028258 161 SSRL---P--FPNFYYELEDV-----SAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 161 ~~~~---~--~~~~~~~~e~~-----l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
++.. + .|...|...|. +.. +..+++++++||+++|||+.
T Consensus 448 ~~~~~~~p~~~p~s~Yg~sK~~~E~~~~~~~~~~g~~~~ilR~~~vyGp~~ 498 (660)
T PRK08125 448 TSNLIVGPINKQRWIYSVSKQLLDRVIWAYGEKEGLRFTLFRPFNWMGPRL 498 (660)
T ss_pred ccccccCCCCCCccchHHHHHHHHHHHHHHHHhcCCceEEEEEceeeCCCc
Confidence 6431 1 13334544443 333 34689999999999999975
No 20
>TIGR01472 gmd GDP-mannose 4,6-dehydratase. Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116).
Probab=99.88 E-value=8.6e-22 Score=166.85 Aligned_cols=166 Identities=17% Similarity=0.111 Sum_probs=123.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CC----------CCCCceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WF----------PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~----------~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+|||||||||||++|+++|+ +.|++|++++|++... .. ...+++ ++.+|++|.+.+.+++
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~l~~~~ 74 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLL-----EKGYEVHGLIRRSSSFNTQRIEHIYEDPHNVNKARMK-LHYGDLTDSSNLRRII 74 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHH-----HCCCEEEEEecCCcccchhhhhhhhhcccccccccee-EEEeccCCHHHHHHHH
Confidence 589999999999999999999 6899999999976421 00 024588 9999999999999999
Q ss_pred HhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecCeeeecccCCccccCCC
Q 028258 77 SLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++.. +|.|||+|+.... .+....++|+.++.++++++.+. +. +.++|+++||..+||.+.
T Consensus 75 ~~~~--~d~ViH~Aa~~~~~~~~~~~~~~~~~n~~gt~~ll~a~~~~---~~~~~~~~v~~SS~~vyg~~~--------- 140 (343)
T TIGR01472 75 DEIK--PTEIYNLAAQSHVKVSFEIPEYTADVDGIGTLRLLEAVRTL---GLIKSVKFYQASTSELYGKVQ--------- 140 (343)
T ss_pred HhCC--CCEEEECCcccccchhhhChHHHHHHHHHHHHHHHHHHHHh---CCCcCeeEEEeccHHhhCCCC---------
Confidence 8764 7999999987432 23445678999999999999876 21 134889999999998531
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|.+|+.+.. |...|...| ++.. +..++++++.|+..+|||..+
T Consensus 141 ---~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 192 (343)
T TIGR01472 141 ---EIPQNETTPFY--PRSPYAAAKLYAHWITVNYREAYGLFAVNGILFNHESPRRG 192 (343)
T ss_pred ---CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHhCCceEEEeecccCCCCCC
Confidence 23567777642 333444333 3322 345788999999999998753
No 21
>PLN02662 cinnamyl-alcohol dehydrogenase family protein
Probab=99.88 E-value=8e-22 Score=165.23 Aligned_cols=168 Identities=15% Similarity=0.151 Sum_probs=121.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.|+|||||||||||++|+++|+ ++|++|++++|+..... . ..++++ ++.+|++|++.+..++++
T Consensus 4 ~~~ilVtGatGfIG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~- 76 (322)
T PLN02662 4 GKVVCVTGASGYIASWLVKLLL-----QRGYTVKATVRDPNDPKKTEHLLALDGAKERLH-LFKANLLEEGSFDSVVDG- 76 (322)
T ss_pred CCEEEEECChHHHHHHHHHHHH-----HCCCEEEEEEcCCCchhhHHHHHhccCCCCceE-EEeccccCcchHHHHHcC-
Confidence 4789999999999999999999 68999999998764311 0 124678 999999999988888875
Q ss_pred ccccceEEeecccCC---chhH-HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe--eeecccCCccccCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ---ESEE-VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK--HYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~-~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~--~y~~~~~~~~~~g~~~~~ 153 (211)
+|+|||+|+... .++. ..+++|+.++.++++++.+. .++++|+++||.. .|++... ..
T Consensus 77 ---~d~Vih~A~~~~~~~~~~~~~~~~~nv~gt~~ll~a~~~~----~~~~~~v~~SS~~~~~y~~~~~---------~~ 140 (322)
T PLN02662 77 ---CEGVFHTASPFYHDVTDPQAELIDPAVKGTLNVLRSCAKV----PSVKRVVVTSSMAAVAYNGKPL---------TP 140 (322)
T ss_pred ---CCEEEEeCCcccCCCCChHHHHHHHHHHHHHHHHHHHHhC----CCCCEEEEccCHHHhcCCCcCC---------CC
Confidence 689999998642 2333 57789999999999998764 2578999999865 3542110 01
Q ss_pred CCCCcCCCCCCCC----CCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~----~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+..+. ....|...|.+.+ +..+++++++||+.+|||..
T Consensus 141 ~~~~~E~~~~~p~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lRp~~v~Gp~~ 197 (322)
T PLN02662 141 DVVVDETWFSDPAFCEESKLWYVLSKTLAEEAAWKFAKENGIDMVTINPAMVIGPLL 197 (322)
T ss_pred CCcCCcccCCChhHhhcccchHHHHHHHHHHHHHHHHHHcCCcEEEEeCCcccCCCC
Confidence 2356776653221 1123444343332 34689999999999999974
No 22
>KOG1371 consensus UDP-glucose 4-epimerase/UDP-sulfoquinovose synthase [Cell wall/membrane/envelope biogenesis]
Probab=99.88 E-value=9.5e-22 Score=160.66 Aligned_cols=166 Identities=17% Similarity=0.140 Sum_probs=132.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.++||||||.||||+|.+-+|+ ++||.|+++++-.... ......+. ++.+|+.|.+.+++.|+
T Consensus 1 ~~~~VLVtGgaGyiGsht~l~L~-----~~gy~v~~vDNl~n~~~~sl~r~~~l~~~~~~v~-f~~~Dl~D~~~L~kvF~ 74 (343)
T KOG1371|consen 1 GGKHVLVTGGAGYIGSHTVLALL-----KRGYGVVIVDNLNNSYLESLKRVRQLLGEGKSVF-FVEGDLNDAEALEKLFS 74 (343)
T ss_pred CCcEEEEecCCcceehHHHHHHH-----hCCCcEEEEecccccchhHHHHHHHhcCCCCceE-EEEeccCCHHHHHHHHh
Confidence 35789999999999999999999 7999999998633221 11237889 99999999999999999
Q ss_pred hcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 78 LISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
... +|+|+|+|+... .++..++..|+.++.++++.++++ +++.++++||+.+||.|.
T Consensus 75 ~~~--fd~V~Hfa~~~~vgeS~~~p~~Y~~nNi~gtlnlLe~~~~~-----~~~~~V~sssatvYG~p~----------- 136 (343)
T KOG1371|consen 75 EVK--FDAVMHFAALAAVGESMENPLSYYHNNIAGTLNLLEVMKAH-----NVKALVFSSSATVYGLPT----------- 136 (343)
T ss_pred hcC--CceEEeehhhhccchhhhCchhheehhhhhHHHHHHHHHHc-----CCceEEEecceeeecCcc-----------
Confidence 886 899999998754 356678899999999999999998 589999999999999763
Q ss_pred CCCCCcCCCCCCCCCCcchh-----HHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~-----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|++|+.|.. .|...|. .|++..+ ...+|..+.+|-++.+|..+
T Consensus 137 -~ip~te~~~t~-~p~~pyg~tK~~iE~i~~d~~~~~~~~~~~LRyfn~~ga~p 188 (343)
T KOG1371|consen 137 -KVPITEEDPTD-QPTNPYGKTKKAIEEIIHDYNKAYGWKVTGLRYFNVIGAHP 188 (343)
T ss_pred -eeeccCcCCCC-CCCCcchhhhHHHHHHHHhhhccccceEEEEEeccccCccc
Confidence 57899998865 2433333 3444433 33459999999999999444
No 23
>PLN02240 UDP-glucose 4-epimerase
Probab=99.88 E-value=3.3e-21 Score=163.45 Aligned_cols=166 Identities=16% Similarity=0.097 Sum_probs=124.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+++++|||||||||||++|+++|+ ++|++|++++|...... ....+++ ++.+|++|++.+.++
T Consensus 3 ~~~~~vlItGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~ 76 (352)
T PLN02240 3 LMGRTILVTGGAGYIGSHTVLQLL-----LAGYKVVVIDNLDNSSEEALRRVKELAGDLGDNLV-FHKVDLRDKEALEKV 76 (352)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCcchHHHHHHHHHhhcccCccce-EEecCcCCHHHHHHH
Confidence 345889999999999999999999 68999999987532110 0124678 999999999999888
Q ss_pred HHhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
++... +|+|||+|+... .++...+++|+.++.++++++.+. ++++|+++||+.+|+.+
T Consensus 77 ~~~~~--~d~vih~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~vyg~~---------- 139 (352)
T PLN02240 77 FASTR--FDAVIHFAGLKAVGESVAKPLLYYDNNLVGTINLLEVMAKH-----GCKKLVFSSSATVYGQP---------- 139 (352)
T ss_pred HHhCC--CCEEEEccccCCccccccCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEccHHHhCCC----------
Confidence 87653 899999997632 244567899999999999999876 56889999998888642
Q ss_pred CCCCCCCcCCCCCCCCCCcchh-----HHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYE-----LEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~-----~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+.+.. +...|. .|.++.. ...+++.+++|++.+||+.+
T Consensus 140 --~~~~~~E~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~R~~~v~G~~~ 192 (352)
T PLN02240 140 --EEVPCTEEFPLS--ATNPYGRTKLFIEEICRDIHASDPEWKIILLRYFNPVGAHP 192 (352)
T ss_pred --CCCCCCCCCCCC--CCCHHHHHHHHHHHHHHHHHHhcCCCCEEEEeecCcCCCCc
Confidence 134678887743 223343 3444433 23578999999999999753
No 24
>COG1088 RfbB dTDP-D-glucose 4,6-dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.88 E-value=1.4e-21 Score=157.77 Aligned_cols=167 Identities=11% Similarity=0.032 Sum_probs=127.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-------CCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-------GWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+++|||||.||||+++++.+++. ...++|+.++.-.-. .....+++. ++++|+.|.+.+.+.++..+
T Consensus 1 ~~iLVTGGaGFIGsnfvr~~~~~---~~d~~v~~~DkLTYAgn~~~l~~~~~~~~~~-fv~~DI~D~~~v~~~~~~~~-- 74 (340)
T COG1088 1 MKILVTGGAGFIGSNFVRYILNK---HPDDHVVNLDKLTYAGNLENLADVEDSPRYR-FVQGDICDRELVDRLFKEYQ-- 74 (340)
T ss_pred CcEEEecCcchHHHHHHHHHHhc---CCCceEEEEecccccCCHHHHHhhhcCCCce-EEeccccCHHHHHHHHHhcC--
Confidence 46899999999999999999852 233668888762111 112357899 99999999999999998765
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|+|+|+.+.. ++....++|+.||.+|++++++. . ..-+|+++|+..|||.-.. ....+
T Consensus 75 ~D~VvhfAAESHVDRSI~~P~~Fi~TNv~GT~~LLEaar~~---~-~~frf~HISTDEVYG~l~~----------~~~~F 140 (340)
T COG1088 75 PDAVVHFAAESHVDRSIDGPAPFIQTNVVGTYTLLEAARKY---W-GKFRFHHISTDEVYGDLGL----------DDDAF 140 (340)
T ss_pred CCeEEEechhccccccccChhhhhhcchHHHHHHHHHHHHh---c-ccceEEEeccccccccccC----------CCCCc
Confidence 8999999988653 57778899999999999999987 2 2247899999999985321 13358
Q ss_pred cCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecC
Q 028258 158 KEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~ 198 (211)
+|++|. .|++.|++.|+-.+ +..|++++|.|+++-|||-
T Consensus 141 tE~tp~--~PsSPYSASKAasD~lVray~~TYglp~~ItrcSNNYGPy 186 (340)
T COG1088 141 TETTPY--NPSSPYSASKAASDLLVRAYVRTYGLPATITRCSNNYGPY 186 (340)
T ss_pred ccCCCC--CCCCCcchhhhhHHHHHHHHHHHcCCceEEecCCCCcCCC
Confidence 899886 34555554444333 5689999999999999973
No 25
>TIGR03466 HpnA hopanoid-associated sugar epimerase. The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene.
Probab=99.88 E-value=3.6e-21 Score=161.18 Aligned_cols=164 Identities=16% Similarity=0.102 Sum_probs=124.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++|||||+||||++++++|+ ++||+|++++|++.... ....+++ ++.+|++|.+++.+++++ +|+|||+
T Consensus 2 ~vlItG~~G~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~l~~~~~~----~d~vi~~ 71 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLL-----EQGEEVRVLVRPTSDRRNLEGLDVE-IVEGDLRDPASLRKAVAG----CRALFHV 71 (328)
T ss_pred eEEEECCccchhHHHHHHHH-----HCCCEEEEEEecCccccccccCCce-EEEeeCCCHHHHHHHHhC----CCEEEEe
Confidence 69999999999999999999 68999999999766432 1234788 999999999998888875 6889999
Q ss_pred cccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 90 PLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 90 a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
++... .++...+++|+.++.++++++... ++++|+++||..+|+... ...+.+|+.+..+.
T Consensus 72 a~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~SS~~~~~~~~-----------~~~~~~e~~~~~~~ 135 (328)
T TIGR03466 72 AADYRLWAPDPEEMYAANVEGTRNLLRAALEA-----GVERVVYTSSVATLGVRG-----------DGTPADETTPSSLD 135 (328)
T ss_pred ceecccCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEechhhcCcCC-----------CCCCcCccCCCCcc
Confidence 87532 345677899999999999999876 578999999988887421 13466777664322
Q ss_pred C-CcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 167 P-NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 167 ~-~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. ...|.. |+++.+ ...+++++++||+.+||++..
T Consensus 136 ~~~~~Y~~sK~~~e~~~~~~~~~~~~~~~ilR~~~~~G~~~~ 177 (328)
T TIGR03466 136 DMIGHYKRSKFLAEQAALEMAAEKGLPVVIVNPSTPIGPRDI 177 (328)
T ss_pred cccChHHHHHHHHHHHHHHHHHhcCCCEEEEeCCccCCCCCC
Confidence 1 233443 333333 235899999999999999754
No 26
>PLN02896 cinnamyl-alcohol dehydrogenase
Probab=99.87 E-value=3.9e-21 Score=163.49 Aligned_cols=170 Identities=15% Similarity=0.123 Sum_probs=119.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++||||||+||||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+.+.+++++
T Consensus 10 ~~~vLVtG~~GfIG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~---- 79 (353)
T PLN02896 10 TGTYCVTGATGYIGSWLVKLLL-----QRGYTVHATLRDPAKSLHLLSKWKEGDRLR-LFRADLQEEGSFDEAVKG---- 79 (353)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHhhccCCeEE-EEECCCCCHHHHHHHHcC----
Confidence 5689999999999999999999 68999999998754310 1124688 899999999988888764
Q ss_pred cceEEeecccCCc-------hhHHH-----HhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 83 ITNLFWVPLQVQE-------SEEVN-----IFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 83 ~~~v~~~a~~~~~-------~~~~~-----~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+|+|||+|+.... ++... ++.|+.++.++++++.+. .++++|+++||..+|+.... .+.
T Consensus 80 ~d~Vih~A~~~~~~~~~~~~~~~~~~~~n~~~~~~~g~~~ll~~~~~~----~~~~~~v~~SS~~vyg~~~~----~~~- 150 (353)
T PLN02896 80 CDGVFHVAASMEFDVSSDHNNIEEYVQSKVIDPAIKGTLNVLKSCLKS----KTVKRVVFTSSISTLTAKDS----NGR- 150 (353)
T ss_pred CCEEEECCccccCCccccccchhhhhhHHhHHHHHHHHHHHHHHHHhc----CCccEEEEEechhhcccccc----CCC-
Confidence 7899999986431 22222 344568999999999875 24789999999999974211 010
Q ss_pred CCCCCCCcCCCCCC-------CCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 151 MPYEVPFKEDSSRL-------PFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 151 ~~~~~~~~e~~~~~-------~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...+++|+.+.. .++...|...|+..+ +..+++++++||+.+|||..
T Consensus 151 --~~~~~~E~~~~p~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyGp~~ 211 (353)
T PLN02896 151 --WRAVVDETCQTPIDHVWNTKASGWVYVLSKLLTEEAAFKYAKENGIDLVSVITTTVAGPFL 211 (353)
T ss_pred --CCCccCcccCCcHHHhhccCCCCccHHHHHHHHHHHHHHHHHHcCCeEEEEcCCcccCCCc
Confidence 113455652210 112333544443333 35689999999999999975
No 27
>PLN02583 cinnamoyl-CoA reductase
Probab=99.86 E-value=7.3e-21 Score=158.38 Aligned_cols=171 Identities=13% Similarity=0.110 Sum_probs=120.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-------CC--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-------WF--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-------~~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+|||||||||||++++++|+ ++||+|+++.|+.... .. ...+++ ++.+|++|.+.+.+++.+
T Consensus 5 ~~k~vlVTGatG~IG~~lv~~Ll-----~~G~~V~~~~R~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~~~~~l~~ 78 (297)
T PLN02583 5 SSKSVCVMDASGYVGFWLVKRLL-----SRGYTVHAAVQKNGETEIEKEIRGLSCEEERLK-VFDVDPLDYHSILDALKG 78 (297)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----hCCCEEEEEEcCchhhhHHHHHHhcccCCCceE-EEEecCCCHHHHHHHHcC
Confidence 35789999999999999999999 6999999999864321 01 124688 899999999999888876
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee-cccCCccccCCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM-GPIFDPSLAGQLMPYE 154 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~-~~~~~~~~~g~~~~~~ 154 (211)
++.|+|+++.... .+...+++|+.++.++++++.+. .++++|+++||...++ .+.. .+ ..
T Consensus 79 ----~d~v~~~~~~~~~~~~~~~~~~~~nv~gt~~ll~aa~~~----~~v~riV~~SS~~a~~~~~~~----~~----~~ 142 (297)
T PLN02583 79 ----CSGLFCCFDPPSDYPSYDEKMVDVEVRAAHNVLEACAQT----DTIEKVVFTSSLTAVIWRDDN----IS----TQ 142 (297)
T ss_pred ----CCEEEEeCccCCcccccHHHHHHHHHHHHHHHHHHHHhc----CCccEEEEecchHheeccccc----CC----CC
Confidence 5678887654322 24567899999999999999875 2468999999876543 1100 00 12
Q ss_pred CCCcCCCCCCCC----CCcchhHHHHHhh-------cCCCceEEEecCCceEecCCC
Q 028258 155 VPFKEDSSRLPF----PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 155 ~~~~e~~~~~~~----~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.+++|+.+..+. +...|...|.+.+ +..+++++++||+.||||...
T Consensus 143 ~~~~E~~~~~~~~~~~~~~~Y~~sK~~aE~~~~~~~~~~gi~~v~lrp~~v~Gp~~~ 199 (297)
T PLN02583 143 KDVDERSWSDQNFCRKFKLWHALAKTLSEKTAWALAMDRGVNMVSINAGLLMGPSLT 199 (297)
T ss_pred CCCCcccCCCHHHHhhcccHHHHHHHHHHHHHHHHHHHhCCcEEEEcCCcccCCCCC
Confidence 356776542110 1113444344333 246899999999999999763
No 28
>PRK10675 UDP-galactose-4-epimerase; Provisional
Probab=99.86 E-value=1.6e-20 Score=158.48 Aligned_cols=163 Identities=13% Similarity=0.091 Sum_probs=121.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++||||||||||++|+++|+ ++|++|++++|...... ....+++ ++.+|++|++.+.++++...
T Consensus 2 ~vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLL-----QNGHDVVILDNLCNSKRSVLPVIERLGGKHPT-FVEGDIRNEALLTEILHDHA-- 73 (338)
T ss_pred eEEEECCCChHHHHHHHHHH-----HCCCeEEEEecCCCchHhHHHHHHHhcCCCce-EEEccCCCHHHHHHHHhcCC--
Confidence 59999999999999999999 68999999886533211 0123567 88999999999888887543
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+.... .+.+.+++|+.++.+++++++.. ++++|+++||+.+|+.. ...++
T Consensus 74 ~d~vvh~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~Ss~~~yg~~------------~~~~~ 136 (338)
T PRK10675 74 IDTVIHFAGLKAVGESVQKPLEYYDNNVNGTLRLISAMRAA-----NVKNLIFSSSATVYGDQ------------PKIPY 136 (338)
T ss_pred CCEEEECCccccccchhhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEeccHHhhCCC------------CCCcc
Confidence 8999999976431 33467789999999999999876 57889999998888742 13467
Q ss_pred cCCCCCCCCCCcchh-----HHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSRLPFPNFYYE-----LEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~~~~~~~~~~-----~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+++.. .|...|. .|.++.. ...+++++++|++.+||+.+
T Consensus 137 ~E~~~~~-~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~ilR~~~v~g~~~ 185 (338)
T PRK10675 137 VESFPTG-TPQSPYGKSKLMVEQILTDLQKAQPDWSIALLRYFNPVGAHP 185 (338)
T ss_pred ccccCCC-CCCChhHHHHHHHHHHHHHHHHhcCCCcEEEEEeeeecCCCc
Confidence 7877641 2333343 3444443 13579999999999999864
No 29
>KOG1430 consensus C-3 sterol dehydrogenase/3-beta-hydroxysteroid dehydrogenase and related dehydrogenases [Lipid transport and metabolism; Amino acid transport and metabolism]
Probab=99.86 E-value=1.2e-20 Score=158.70 Aligned_cols=171 Identities=15% Similarity=0.081 Sum_probs=125.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CCC------CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GWF------PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~~------~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+.+++||||+||+|+||+++|++. ....+|++++..+.. .+. ....++ ++.+|+.|...+..++.+
T Consensus 2 ~~~~~vlVtGG~GflG~hlv~~L~~~---~~~~~irv~D~~~~~~~~~~e~~~~~~~~v~-~~~~D~~~~~~i~~a~~~- 76 (361)
T KOG1430|consen 2 EKKLSVLVTGGSGFLGQHLVQALLEN---ELKLEIRVVDKTPTQSNLPAELTGFRSGRVT-VILGDLLDANSISNAFQG- 76 (361)
T ss_pred CcCCEEEEECCccHHHHHHHHHHHhc---ccccEEEEeccCccccccchhhhcccCCcee-EEecchhhhhhhhhhccC-
Confidence 44678999999999999999999941 224889999998763 221 146788 999999999888888876
Q ss_pred ccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
+ .|+|||+...+ +.+..+++|+.||.+++++|.+. ++++++++||..+..+.. +.
T Consensus 77 ---~-~Vvh~aa~~~~~~~~~~~~~~~~vNV~gT~nvi~~c~~~-----~v~~lIYtSs~~Vvf~g~-----------~~ 136 (361)
T KOG1430|consen 77 ---A-VVVHCAASPVPDFVENDRDLAMRVNVNGTLNVIEACKEL-----GVKRLIYTSSAYVVFGGE-----------PI 136 (361)
T ss_pred ---c-eEEEeccccCccccccchhhheeecchhHHHHHHHHHHh-----CCCEEEEecCceEEeCCe-----------ec
Confidence 4 67788776443 35667899999999999999998 789999999988875321 11
Q ss_pred CCCcCCCCCCCCCCcchh-----HHHHHhhc--CCCceEEEecCCceEecCCCCC
Q 028258 155 VPFKEDSSRLPFPNFYYE-----LEDVSASY--SPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~-----~e~~l~~~--~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
.-.+|+.|.......+|. .|+++.++ ..++..+.+||..||||++...
T Consensus 137 ~n~~E~~p~p~~~~d~Y~~sKa~aE~~Vl~an~~~~l~T~aLR~~~IYGpgd~~~ 191 (361)
T KOG1430|consen 137 INGDESLPYPLKHIDPYGESKALAEKLVLEANGSDDLYTCALRPPGIYGPGDKRL 191 (361)
T ss_pred ccCCCCCCCccccccccchHHHHHHHHHHHhcCCCCeeEEEEccccccCCCCccc
Confidence 224555553211112333 45555542 3569999999999999998654
No 30
>PLN02653 GDP-mannose 4,6-dehydratase
Probab=99.86 E-value=2.2e-20 Score=158.01 Aligned_cols=169 Identities=17% Similarity=0.069 Sum_probs=123.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----C-C------CCCCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----W-F------PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~-~------~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|+|||||||||||++|+++|+ ++|++|++++|++... . . ....++ ++.+|++|.+.+.+++
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~ 79 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLL-----SKGYEVHGIIRRSSNFNTQRLDHIYIDPHPNKARMK-LHYGDLSDASSLRRWL 79 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHH-----HCCCEEEEEecccccccccchhhhccccccccCceE-EEEecCCCHHHHHHHH
Confidence 5789999999999999999999 6899999999865321 0 0 023578 9999999999999998
Q ss_pred HhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+... +|+|||+|+.... ++...+++|+.++.++++++.........+.+|+++||+.+||..
T Consensus 80 ~~~~--~d~Vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~v~~Ss~~vyg~~----------- 146 (340)
T PLN02653 80 DDIK--PDEVYNLAAQSHVAVSFEMPDYTADVVATGALRLLEAVRLHGQETGRQIKYYQAGSSEMYGST----------- 146 (340)
T ss_pred HHcC--CCEEEECCcccchhhhhhChhHHHHHHHHHHHHHHHHHHHhccccccceeEEEeccHHHhCCC-----------
Confidence 8764 7999999987432 344566889999999999998761000112488999998999742
Q ss_pred CCCCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|++|+.+.. |...|.. |.++.. ...++.++..|+..+|||+.+
T Consensus 147 --~~~~~E~~~~~--p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~~~~~~gp~~~ 198 (340)
T PLN02653 147 --PPPQSETTPFH--PRSPYAVAKVAAHWYTVNYREAYGLFACNGILFNHESPRRG 198 (340)
T ss_pred --CCCCCCCCCCC--CCChhHHHHHHHHHHHHHHHHHcCCeEEEeeeccccCCCCC
Confidence 12667777643 3333443 333332 346788899999999998653
No 31
>PLN02686 cinnamoyl-CoA reductase
Probab=99.86 E-value=1.1e-20 Score=161.69 Aligned_cols=174 Identities=11% Similarity=0.086 Sum_probs=120.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----C--------CCCCceeEEEeeCCCHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----F--------PTALVDRYITFDALDPTD 71 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~--------~~~~~~~~i~~Dl~d~~~ 71 (211)
+..+++|+||||||+||||++++++|+ ++||+|+++.|+..... . ...+++ ++.+|++|.+.
T Consensus 48 ~~~~~~k~VLVTGatGfIG~~lv~~L~-----~~G~~V~~~~r~~~~~~~l~~l~~~~~~~~~~~~~~-~v~~Dl~d~~~ 121 (367)
T PLN02686 48 GADAEARLVCVTGGVSFLGLAIVDRLL-----RHGYSVRIAVDTQEDKEKLREMEMFGEMGRSNDGIW-TVMANLTEPES 121 (367)
T ss_pred ccCCCCCEEEEECCchHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhccccccCCceE-EEEcCCCCHHH
Confidence 334557899999999999999999999 68999998888643210 0 013578 89999999999
Q ss_pred HHHHHHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC--eeeecccCCc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT--KHYMGPIFDP 144 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~--~~y~~~~~~~ 144 (211)
+.+++++ ++.|||+++.... .+....++|+.++.++++++.+. .++++|+++||. .+|+....
T Consensus 122 l~~~i~~----~d~V~hlA~~~~~~~~~~~~~~~~~~nv~gt~~llea~~~~----~~v~r~V~~SS~~~~vyg~~~~-- 191 (367)
T PLN02686 122 LHEAFDG----CAGVFHTSAFVDPAGLSGYTKSMAELEAKASENVIEACVRT----ESVRKCVFTSSLLACVWRQNYP-- 191 (367)
T ss_pred HHHHHHh----ccEEEecCeeecccccccccchhhhhhHHHHHHHHHHHHhc----CCccEEEEeccHHHhcccccCC--
Confidence 9888886 5788899876422 12345678999999999999874 258899999985 46753110
Q ss_pred cccCCCCCCCCCCcCCCCCC----CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRL----PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~----~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.. ...+++|+.+.. ..|...|.. |+++.. +..+++++++||+.+|||+.
T Consensus 192 ---~~---~~~~i~E~~~~~~~~~~~p~~~Y~~sK~~~E~~~~~~~~~~gl~~v~lRp~~vyGp~~ 251 (367)
T PLN02686 192 ---HD---LPPVIDEESWSDESFCRDNKLWYALGKLKAEKAAWRAARGKGLKLATICPALVTGPGF 251 (367)
T ss_pred ---CC---CCcccCCCCCCChhhcccccchHHHHHHHHHHHHHHHHHhcCceEEEEcCCceECCCC
Confidence 00 001244443211 123333443 444333 34689999999999999975
No 32
>TIGR01214 rmlD dTDP-4-dehydrorhamnose reductase. This enzyme catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS core antigen, O-antigen, etc.
Probab=99.86 E-value=1.5e-20 Score=155.05 Aligned_cols=147 Identities=17% Similarity=0.179 Sum_probs=114.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++++++|+ ++||+|++++|+ .+|+.|++.+.+++++.+ +|+|||++
T Consensus 1 kilv~G~tG~iG~~l~~~l~-----~~g~~v~~~~r~---------------~~d~~~~~~~~~~~~~~~--~d~vi~~a 58 (287)
T TIGR01214 1 RILITGANGQLGRELVQQLS-----PEGRVVVALTSS---------------QLDLTDPEALERLLRAIR--PDAVVNTA 58 (287)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hcCCEEEEeCCc---------------ccCCCCHHHHHHHHHhCC--CCEEEECC
Confidence 48999999999999999999 689999999874 368889999999998865 79999999
Q ss_pred ccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC
Q 028258 91 LQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP 165 (211)
Q Consensus 91 ~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~ 165 (211)
+.... .+...+++|+.++.++++++.+. +. +|+++||..+|+.. ...|++|+++.
T Consensus 59 ~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~-~~v~~Ss~~vy~~~------------~~~~~~E~~~~-- 118 (287)
T TIGR01214 59 AYTDVDGAESDPEKAFAVNALAPQNLARAAARH-----GA-RLVHISTDYVFDGE------------GKRPYREDDAT-- 118 (287)
T ss_pred ccccccccccCHHHHHHHHHHHHHHHHHHHHHc-----CC-eEEEEeeeeeecCC------------CCCCCCCCCCC--
Confidence 86432 34456789999999999999876 33 78999999999642 13567787764
Q ss_pred CCCcchhHHHHHhh---cCCCceEEEecCCceEecCC
Q 028258 166 FPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 166 ~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|...|...|...+ +..+++++++||+.+||+..
T Consensus 119 ~~~~~Y~~~K~~~E~~~~~~~~~~~ilR~~~v~G~~~ 155 (287)
T TIGR01214 119 NPLNVYGQSKLAGEQAIRAAGPNALIVRTSWLYGGGG 155 (287)
T ss_pred CCcchhhHHHHHHHHHHHHhCCCeEEEEeeecccCCC
Confidence 23344544444333 23478999999999999975
No 33
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.86 E-value=1.3e-20 Score=172.58 Aligned_cols=171 Identities=15% Similarity=0.042 Sum_probs=121.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--C----C-CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--G----W-FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~----~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.|+|||||||||||++|+++|++. ..+++|++++|.... . . ...++++ ++.+|++|.+.+...+...+
T Consensus 6 ~~~VLVTGatGfIG~~lv~~Ll~~---g~~~~V~~~d~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~~~~~~~~~~~- 80 (668)
T PLN02260 6 PKNILITGAAGFIASHVANRLIRN---YPDYKIVVLDKLDYCSNLKNLNPSKSSPNFK-FVKGDIASADLVNYLLITEG- 80 (668)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHh---CCCCEEEEEeCCCccchhhhhhhcccCCCeE-EEECCCCChHHHHHHHhhcC-
Confidence 578999999999999999999930 127899999885311 0 0 1235788 99999999988776664433
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|+|||+|+.... ++.+.+++|+.++.+++++++.. + .+++|+++||..+|+.+.. . ...+
T Consensus 81 -~D~ViHlAa~~~~~~~~~~~~~~~~~Nv~gt~~ll~a~~~~---~-~vkr~I~~SS~~vyg~~~~-----~----~~~~ 146 (668)
T PLN02260 81 -IDTIMHFAAQTHVDNSFGNSFEFTKNNIYGTHVLLEACKVT---G-QIRRFIHVSTDEVYGETDE-----D----ADVG 146 (668)
T ss_pred -CCEEEECCCccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---C-CCcEEEEEcchHHhCCCcc-----c----cccC
Confidence 8999999987542 23456789999999999999886 2 4789999999999985321 0 0112
Q ss_pred CcCCCCCCCCCCcch----hHHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYY----ELEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~----~~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+|+.+.. +.+.|. ..|.++.. +..+++++++||+.|||+..
T Consensus 147 ~~E~~~~~-p~~~Y~~sK~~aE~~v~~~~~~~~l~~vilR~~~VyGp~~ 194 (668)
T PLN02260 147 NHEASQLL-PTNPYSATKAGAEMLVMAYGRSYGLPVITTRGNNVYGPNQ 194 (668)
T ss_pred ccccCCCC-CCCCcHHHHHHHHHHHHHHHHHcCCCEEEECcccccCcCC
Confidence 34555432 223332 23444443 34689999999999999975
No 34
>PRK11150 rfaD ADP-L-glycero-D-mannoheptose-6-epimerase; Provisional
Probab=99.85 E-value=8e-21 Score=158.48 Aligned_cols=158 Identities=15% Similarity=0.144 Sum_probs=107.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc------ccccce
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI------SQEITN 85 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~------~~~~~~ 85 (211)
|||||||||||++|+++|+ +.|++++++.|+..... .... +..+|+.|..+....++.+ .. +|+
T Consensus 2 ilVtGa~GfiG~~l~~~L~-----~~g~~~v~~~~~~~~~~---~~~~-~~~~~~~d~~~~~~~~~~~~~~~~~~~-~d~ 71 (308)
T PRK11150 2 IIVTGGAGFIGSNIVKALN-----DKGITDILVVDNLKDGT---KFVN-LVDLDIADYMDKEDFLAQIMAGDDFGD-IEA 71 (308)
T ss_pred EEEecCCcHHHHHHHHHHH-----hCCCceEEEecCCCcch---HHHh-hhhhhhhhhhhHHHHHHHHhcccccCC-ccE
Confidence 8999999999999999999 68998777766543210 1123 4456776654333322221 12 899
Q ss_pred EEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCC
Q 028258 86 LFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSS 162 (211)
Q Consensus 86 v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~ 162 (211)
|||+|+.... +....++.|+.++.++++++++. ++ +|+++||+.+|+.+. ..+.+|+.+
T Consensus 72 Vih~A~~~~~~~~~~~~~~~~n~~~t~~ll~~~~~~-----~~-~~i~~SS~~vyg~~~------------~~~~~E~~~ 133 (308)
T PRK11150 72 IFHEGACSSTTEWDGKYMMDNNYQYSKELLHYCLER-----EI-PFLYASSAATYGGRT------------DDFIEEREY 133 (308)
T ss_pred EEECceecCCcCCChHHHHHHHHHHHHHHHHHHHHc-----CC-cEEEEcchHHhCcCC------------CCCCccCCC
Confidence 9999975332 33456789999999999999886 45 589999999997531 224566655
Q ss_pred CCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 163 RLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 163 ~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .|...|.. |+++.. ...+++++++||+.+||++.
T Consensus 134 ~--~p~~~Y~~sK~~~E~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (308)
T PRK11150 134 E--KPLNVYGYSKFLFDEYVRQILPEANSQICGFRYFNVYGPRE 175 (308)
T ss_pred C--CCCCHHHHHHHHHHHHHHHHHHHcCCCEEEEeeeeecCCCC
Confidence 3 23233433 433333 34689999999999999975
No 35
>PLN02725 GDP-4-keto-6-deoxymannose-3,5-epimerase-4-reductase
Probab=99.85 E-value=6.7e-21 Score=158.35 Aligned_cols=149 Identities=14% Similarity=0.139 Sum_probs=111.7
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeeccc
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPLQ 92 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~ 92 (211)
||||||||||++|++.|+ +.|++|+++.+ ...+|++|.+++.+.++..+ +|+|||||+.
T Consensus 1 lItGa~GfiG~~l~~~L~-----~~g~~v~~~~~--------------~~~~Dl~~~~~l~~~~~~~~--~d~Vih~A~~ 59 (306)
T PLN02725 1 FVAGHRGLVGSAIVRKLE-----ALGFTNLVLRT--------------HKELDLTRQADVEAFFAKEK--PTYVILAAAK 59 (306)
T ss_pred CcccCCCcccHHHHHHHH-----hCCCcEEEeec--------------cccCCCCCHHHHHHHHhccC--CCEEEEeeee
Confidence 699999999999999999 68888776542 22589999999999888764 7999999976
Q ss_pred CC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC--
Q 028258 93 VQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL-- 164 (211)
Q Consensus 93 ~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~-- 164 (211)
.. ..+.+.++.|+.++.++++++.+. ++++|++.||+.+|+.. ...|++|+++..
T Consensus 60 ~~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~~~~i~~SS~~vyg~~------------~~~~~~E~~~~~~~ 122 (306)
T PLN02725 60 VGGIHANMTYPADFIRENLQIQTNVIDAAYRH-----GVKKLLFLGSSCIYPKF------------APQPIPETALLTGP 122 (306)
T ss_pred ecccchhhhCcHHHHHHHhHHHHHHHHHHHHc-----CCCeEEEeCceeecCCC------------CCCCCCHHHhccCC
Confidence 32 234567889999999999999987 57899999999999742 135677776321
Q ss_pred CCC-CcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 165 PFP-NFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~-~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..| +..|.. |+++.. ...+++++++||+.+||++.
T Consensus 123 ~~p~~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~R~~~vyG~~~ 165 (306)
T PLN02725 123 PEPTNEWYAIAKIAGIKMCQAYRIQYGWDAISGMPTNLYGPHD 165 (306)
T ss_pred CCCCcchHHHHHHHHHHHHHHHHHHhCCCEEEEEecceeCCCC
Confidence 112 332433 333322 34689999999999999974
No 36
>CHL00194 ycf39 Ycf39; Provisional
Probab=99.85 E-value=6e-21 Score=160.20 Aligned_cols=148 Identities=11% Similarity=0.065 Sum_probs=111.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|||||||||||++++++|+ ++||+|++++|++.+.. ....+++ ++.+|++|++++.+++++ +|+|||+
T Consensus 2 kIlVtGatG~iG~~lv~~Ll-----~~g~~V~~l~R~~~~~~~l~~~~v~-~v~~Dl~d~~~l~~al~g----~d~Vi~~ 71 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQAL-----DEGYQVRCLVRNLRKASFLKEWGAE-LVYGDLSLPETLPPSFKG----VTAIIDA 71 (317)
T ss_pred EEEEECCCcHHHHHHHHHHH-----HCCCeEEEEEcChHHhhhHhhcCCE-EEECCCCCHHHHHHHHCC----CCEEEEC
Confidence 69999999999999999999 68999999999865321 1235789 999999999999999886 6889998
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
++....++...+++|+.++.+++++++++ ++++|+++|+...+. ++ .. +....
T Consensus 72 ~~~~~~~~~~~~~~~~~~~~~l~~aa~~~-----gvkr~I~~Ss~~~~~--------~~-----------~~---~~~~~ 124 (317)
T CHL00194 72 STSRPSDLYNAKQIDWDGKLALIEAAKAA-----KIKRFIFFSILNAEQ--------YP-----------YI---PLMKL 124 (317)
T ss_pred CCCCCCCccchhhhhHHHHHHHHHHHHHc-----CCCEEEEeccccccc--------cC-----------CC---hHHHH
Confidence 76543344556788999999999999987 688999988732210 00 00 11122
Q ss_pred chhHHHHHhhcCCCceEEEecCCceEec
Q 028258 170 YYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 170 ~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+...|+++. ..+++|+++||+.+|+.
T Consensus 125 K~~~e~~l~--~~~l~~tilRp~~~~~~ 150 (317)
T CHL00194 125 KSDIEQKLK--KSGIPYTIFRLAGFFQG 150 (317)
T ss_pred HHHHHHHHH--HcCCCeEEEeecHHhhh
Confidence 334555554 47899999999988864
No 37
>PLN02166 dTDP-glucose 4,6-dehydratase
Probab=99.85 E-value=1.6e-20 Score=163.92 Aligned_cols=156 Identities=17% Similarity=0.178 Sum_probs=113.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|||||||||||++|+++|+ +.|++|++++|...... ...+.++ ++..|+.+.. +.+
T Consensus 120 ~mkILVTGatGFIGs~Lv~~Ll-----~~G~~V~~ldr~~~~~~~~~~~~~~~~~~~-~~~~Di~~~~-----~~~---- 184 (436)
T PLN02166 120 RLRIVVTGGAGFVGSHLVDKLI-----GRGDEVIVIDNFFTGRKENLVHLFGNPRFE-LIRHDVVEPI-----LLE---- 184 (436)
T ss_pred CCEEEEECCccHHHHHHHHHHH-----HCCCEEEEEeCCCCccHhHhhhhccCCceE-EEECcccccc-----ccC----
Confidence 4679999999999999999999 68999999998532110 1124678 8889987652 222
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++.+.+++|+.++.+++++|++. +. +|+++||..+|+.+. ..|.
T Consensus 185 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gT~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~ 246 (436)
T PLN02166 185 VDQIYHLACPASPVHYKYNPVKTIKTNVMGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------EHPQ 246 (436)
T ss_pred CCEEEECceeccchhhccCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECcHHHhCCCC------------CCCC
Confidence 799999998643 245567889999999999999986 33 789999999998532 2345
Q ss_pred cCCC-----CCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 158 KEDS-----SRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~-----~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+. |. .|...|.. |+++.+ +..+++++++||+++||++.
T Consensus 247 ~E~~~~~~~p~--~p~s~Yg~SK~~aE~~~~~y~~~~~l~~~ilR~~~vYGp~~ 298 (436)
T PLN02166 247 KETYWGNVNPI--GERSCYDEGKRTAETLAMDYHRGAGVEVRIARIFNTYGPRM 298 (436)
T ss_pred CccccccCCCC--CCCCchHHHHHHHHHHHHHHHHHhCCCeEEEEEccccCCCC
Confidence 5553 22 22333443 444433 34689999999999999974
No 38
>PLN02206 UDP-glucuronate decarboxylase
Probab=99.84 E-value=3.8e-20 Score=161.73 Aligned_cols=158 Identities=15% Similarity=0.130 Sum_probs=113.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------CCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------WFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|||||||||||++|+++|+ ++|++|++++|..... .....+++ ++.+|+.++. +.+
T Consensus 119 ~~kILVTGatGfIGs~Lv~~Ll-----~~G~~V~~ld~~~~~~~~~~~~~~~~~~~~-~i~~D~~~~~-----l~~---- 183 (442)
T PLN02206 119 GLRVVVTGGAGFVGSHLVDRLM-----ARGDSVIVVDNFFTGRKENVMHHFSNPNFE-LIRHDVVEPI-----LLE---- 183 (442)
T ss_pred CCEEEEECcccHHHHHHHHHHH-----HCcCEEEEEeCCCccchhhhhhhccCCceE-EEECCccChh-----hcC----
Confidence 4689999999999999999999 6899999998753211 11235678 8899997753 222
Q ss_pred cceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|||+|+... .++.+.+++|+.++.+++++|++. ++ +|+++||+.+|+.+. ..|.
T Consensus 184 ~D~ViHlAa~~~~~~~~~~p~~~~~~Nv~gt~nLleaa~~~-----g~-r~V~~SS~~VYg~~~------------~~p~ 245 (442)
T PLN02206 184 VDQIYHLACPASPVHYKFNPVKTIKTNVVGTLNMLGLAKRV-----GA-RFLLTSTSEVYGDPL------------QHPQ 245 (442)
T ss_pred CCEEEEeeeecchhhhhcCHHHHHHHHHHHHHHHHHHHHHh-----CC-EEEEECChHHhCCCC------------CCCC
Confidence 799999998643 245567889999999999999886 34 789999999997532 2344
Q ss_pred cCCCCC--C-CCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 158 KEDSSR--L-PFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~~~--~-~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+|+... . ..+...|.. |+.+.. +..+++++++||+.+||++.
T Consensus 246 ~E~~~~~~~P~~~~s~Y~~SK~~aE~~~~~y~~~~g~~~~ilR~~~vyGp~~ 297 (442)
T PLN02206 246 VETYWGNVNPIGVRSCYDEGKRTAETLTMDYHRGANVEVRIARIFNTYGPRM 297 (442)
T ss_pred CccccccCCCCCccchHHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 554311 0 112333433 444333 34689999999999999973
No 39
>TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor.
Probab=99.84 E-value=1e-19 Score=151.51 Aligned_cols=164 Identities=11% Similarity=0.018 Sum_probs=118.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCC--C-C--C--CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPP--P-G--W--FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~--~-~--~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+||||||||+||++++++|+ +.| ++|++++|... . . . ...++++ ++.+|++|++++.+++++..
T Consensus 1 ~ilItGatG~iG~~l~~~l~-----~~~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~- 73 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYIL-----NEHPDAEVIVLDKLTYAGNLENLADLEDNPRYR-FVKGDIGDRELVSRLFTEHQ- 73 (317)
T ss_pred CEEEEcCCchHHHHHHHHHH-----HhCCCCEEEEecCCCcchhhhhhhhhccCCCcE-EEEcCCcCHHHHHHHHhhcC-
Confidence 48999999999999999999 454 78998876321 1 0 0 1124688 89999999999999988764
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|.|||+++.... ++...+++|+.++.++++++.+. ..+ .+++++||..+|+.... ..+
T Consensus 74 -~d~vi~~a~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~---~~~-~~~i~~Ss~~v~g~~~~-----------~~~ 137 (317)
T TIGR01181 74 -PDAVVHFAAESHVDRSISGPAAFIETNVVGTYTLLEAVRKY---WHE-FRFHHISTDEVYGDLEK-----------GDA 137 (317)
T ss_pred -CCEEEEcccccCchhhhhCHHHHHHHHHHHHHHHHHHHHhc---CCC-ceEEEeeccceeCCCCC-----------CCC
Confidence 7999999986432 34556789999999999999875 222 36899999999975311 225
Q ss_pred CcCCCCCCCCCCcchh-----HHHHHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYYE-----LEDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~-----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+|+.+.. |...|. .|.++.. ...+++++++||+.+||+..
T Consensus 138 ~~e~~~~~--~~~~Y~~sK~~~e~~~~~~~~~~~~~~~i~R~~~i~G~~~ 185 (317)
T TIGR01181 138 FTETTPLA--PSSPYSASKAASDHLVRAYHRTYGLPALITRCSNNYGPYQ 185 (317)
T ss_pred cCCCCCCC--CCCchHHHHHHHHHHHHHHHHHhCCCeEEEEeccccCCCC
Confidence 66666532 333333 3333333 35689999999999999864
No 40
>TIGR01179 galE UDP-glucose-4-epimerase. This enzyme interconverts UDP-glucose and UDP-galactose. A set of related proteins, some of which are tentatively identified as UDP-glucose-4-epimerase in Thermotoga maritima, Bacillus halodurans, and several archaea, but deeply branched from this set and lacking experimental evidence, are excluded from this model and described separately.
Probab=99.83 E-value=2.3e-19 Score=149.88 Aligned_cols=163 Identities=18% Similarity=0.151 Sum_probs=119.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
+||||||||+||++++++|+ +.|++|++++|...... . ...+++ ++.+|+++++.+.++++... +|
T Consensus 1 kvlV~GatG~iG~~l~~~l~-----~~g~~V~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~--~d 72 (328)
T TIGR01179 1 KILVTGGAGYIGSHTVRQLL-----ESGHEVVVLDNLSNGSPEALKRGERITRVT-FVEGDLRDRELLDRLFEEHK--ID 72 (328)
T ss_pred CEEEeCCCCHHHHHHHHHHH-----hCCCeEEEEeCCCccchhhhhhhccccceE-EEECCCCCHHHHHHHHHhCC--Cc
Confidence 58999999999999999999 68999998866332210 0 012577 88999999999998887643 89
Q ss_pred eEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 85 NLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 85 ~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
+|+|+++.... ++.+.++.|+.++.++++++.+. ++++++++||..+|+.+. ..+++|
T Consensus 73 ~vv~~ag~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~~v~~ss~~~~g~~~------------~~~~~e 135 (328)
T TIGR01179 73 AVIHFAGLIAVGESVQDPLKYYRNNVVNTLNLLEAMQQT-----GVKKFIFSSSAAVYGEPS------------SIPISE 135 (328)
T ss_pred EEEECccccCcchhhcCchhhhhhhHHHHHHHHHHHHhc-----CCCEEEEecchhhcCCCC------------CCCccc
Confidence 99999986432 33456788999999999999876 567899999988886421 235677
Q ss_pred CCCCCCCCCcchh-----HHHHHhh--cC-CCceEEEecCCceEecCCC
Q 028258 160 DSSRLPFPNFYYE-----LEDVSAS--YS-PAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 160 ~~~~~~~~~~~~~-----~e~~l~~--~~-~~~~~~i~Rp~~i~G~~~~ 200 (211)
+++.. +...|. .|.++.. +. .+++++++||+.+||+.+.
T Consensus 136 ~~~~~--~~~~y~~sK~~~e~~~~~~~~~~~~~~~~ilR~~~v~g~~~~ 182 (328)
T TIGR01179 136 DSPLG--PINPYGRSKLMSERILRDLSKADPGLSYVILRYFNVAGADPE 182 (328)
T ss_pred cCCCC--CCCchHHHHHHHHHHHHHHHHhccCCCEEEEecCcccCCCCC
Confidence 77643 333333 3444433 23 7899999999999998653
No 41
>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B ....
Probab=99.83 E-value=3.3e-20 Score=143.45 Aligned_cols=148 Identities=21% Similarity=0.259 Sum_probs=110.8
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|+|+||||++|++++++|+ ++|++|+++.|++.+... ..+++ ++.+|+.|++.+.+++++ +|+||++++
T Consensus 1 I~V~GatG~vG~~l~~~L~-----~~~~~V~~~~R~~~~~~~-~~~~~-~~~~d~~d~~~~~~al~~----~d~vi~~~~ 69 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLL-----RRGHEVTALVRSPSKAED-SPGVE-IIQGDLFDPDSVKAALKG----ADAVIHAAG 69 (183)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTSEEEEEESSGGGHHH-CTTEE-EEESCTTCHHHHHHHHTT----SSEEEECCH
T ss_pred eEEECCCChHHHHHHHHHH-----HCCCEEEEEecCchhccc-ccccc-cceeeehhhhhhhhhhhh----cchhhhhhh
Confidence 7999999999999999999 688999999999875432 68999 999999999999999996 588999986
Q ss_pred cCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcch
Q 028258 92 QVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYY 171 (211)
Q Consensus 92 ~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~ 171 (211)
....+ ...+.++++++++. ++++++++|+..+|..+.. ....+..+ ....|+
T Consensus 70 ~~~~~--------~~~~~~~~~a~~~~-----~~~~~v~~s~~~~~~~~~~------------~~~~~~~~---~~~~~~ 121 (183)
T PF13460_consen 70 PPPKD--------VDAAKNIIEAAKKA-----GVKRVVYLSSAGVYRDPPG------------LFSDEDKP---IFPEYA 121 (183)
T ss_dssp STTTH--------HHHHHHHHHHHHHT-----TSSEEEEEEETTGTTTCTS------------EEEGGTCG---GGHHHH
T ss_pred hhccc--------cccccccccccccc-----ccccceeeeccccCCCCCc------------cccccccc---chhhhH
Confidence 55431 55678899999987 6889999999887753210 00111111 112233
Q ss_pred h----HHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 172 E----LEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 172 ~----~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
. .|+.+. ..+++|+++||+.+||+...
T Consensus 122 ~~~~~~e~~~~--~~~~~~~ivrp~~~~~~~~~ 152 (183)
T PF13460_consen 122 RDKREAEEALR--ESGLNWTIVRPGWIYGNPSR 152 (183)
T ss_dssp HHHHHHHHHHH--HSTSEEEEEEESEEEBTTSS
T ss_pred HHHHHHHHHHH--hcCCCEEEEECcEeEeCCCc
Confidence 2 233343 36999999999999998743
No 42
>KOG1429 consensus dTDP-glucose 4-6-dehydratase/UDP-glucuronic acid decarboxylase [Carbohydrate transport and metabolism; Cell wall/membrane/envelope biogenesis]
Probab=99.83 E-value=7.3e-20 Score=146.91 Aligned_cols=158 Identities=18% Similarity=0.189 Sum_probs=122.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC------CCCCCCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP------PGWFPTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~------~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
.++|+||||.||||+|||+.|. .+|++|++++.-.. ..|..+++++ .+..|+..+ .+..
T Consensus 27 ~lrI~itGgaGFIgSHLvdkLm-----~egh~VIa~Dn~ftg~k~n~~~~~~~~~fe-l~~hdv~~p-----l~~e---- 91 (350)
T KOG1429|consen 27 NLRILITGGAGFIGSHLVDKLM-----TEGHEVIALDNYFTGRKENLEHWIGHPNFE-LIRHDVVEP-----LLKE---- 91 (350)
T ss_pred CcEEEEecCcchHHHHHHHHHH-----hcCCeEEEEecccccchhhcchhccCccee-EEEeechhH-----HHHH----
Confidence 5789999999999999999999 78999999987432 1345678899 999999765 4454
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPF 157 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~ 157 (211)
+|+|+|+|+..++ ++.+.+..|..++.+++..+++. + ++|++.|++.+||.|.. .|.
T Consensus 92 vD~IyhLAapasp~~y~~npvktIktN~igtln~lglakrv-----~-aR~l~aSTseVYgdp~~------------hpq 153 (350)
T KOG1429|consen 92 VDQIYHLAAPASPPHYKYNPVKTIKTNVIGTLNMLGLAKRV-----G-ARFLLASTSEVYGDPLV------------HPQ 153 (350)
T ss_pred hhhhhhhccCCCCcccccCccceeeecchhhHHHHHHHHHh-----C-ceEEEeecccccCCccc------------CCC
Confidence 6889999988654 56778899999999999988876 2 78899999999998753 233
Q ss_pred cCCC---CCCCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 158 KEDS---SRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 158 ~e~~---~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.|+. .....|...|..+|.+.+ ++.|+.+.|.|+.+.|||..
T Consensus 154 ~e~ywg~vnpigpr~cydegKr~aE~L~~~y~k~~giE~rIaRifNtyGPrm 205 (350)
T KOG1429|consen 154 VETYWGNVNPIGPRSCYDEGKRVAETLCYAYHKQEGIEVRIARIFNTYGPRM 205 (350)
T ss_pred ccccccccCcCCchhhhhHHHHHHHHHHHHhhcccCcEEEEEeeecccCCcc
Confidence 3322 111245666766666555 56899999999999999975
No 43
>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase. This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.
Probab=99.83 E-value=2.4e-19 Score=151.05 Aligned_cols=153 Identities=18% Similarity=0.173 Sum_probs=111.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+||||++++++|+ ++| ++|++++|+..... ....+++ ++.+|++|++.+.+++++
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~-----~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~-~v~~Dl~d~~~l~~~~~~-- 74 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLL-----ENYNPKKIIIYSRDELKQWEMQQKFPAPCLR-FFIGDVRDKERLTRALRG-- 74 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HhCCCcEEEEEcCChhHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHHhc--
Confidence 45889999999999999999999 454 78999988754311 1124688 999999999999888875
Q ss_pred cccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 81 QEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 81 ~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
+|+|||+|+... .++.+.+++|+.++.++++++.+. ++++|+++||...+
T Consensus 75 --iD~Vih~Ag~~~~~~~~~~~~~~~~~Nv~g~~~ll~aa~~~-----~~~~iV~~SS~~~~------------------ 129 (324)
T TIGR03589 75 --VDYVVHAAALKQVPAAEYNPFECIRTNINGAQNVIDAAIDN-----GVKRVVALSTDKAA------------------ 129 (324)
T ss_pred --CCEEEECcccCCCchhhcCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEEeCCCCC------------------
Confidence 689999998642 134567899999999999999976 56789998873211
Q ss_pred CCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 156 PFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.|..+........|.++.. +..+++++++||+.+||++
T Consensus 130 -----~p~~~Y~~sK~~~E~l~~~~~~~~~~~gi~~~~lR~g~v~G~~ 172 (324)
T TIGR03589 130 -----NPINLYGATKLASDKLFVAANNISGSKGTRFSVVRYGNVVGSR 172 (324)
T ss_pred -----CCCCHHHHHHHHHHHHHHHHHhhccccCcEEEEEeecceeCCC
Confidence 0100000111223443322 3468999999999999985
No 44
>PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase
Probab=99.82 E-value=9.9e-20 Score=156.99 Aligned_cols=156 Identities=17% Similarity=0.124 Sum_probs=115.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|||||||||||++++++|+ ++||+|++++|+..... ...++++ ++.+|++|++.+.+++++
T Consensus 59 ~~~kVLVtGatG~IG~~l~~~Ll-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~-~v~~Dl~d~~~l~~~~~~ 132 (390)
T PLN02657 59 KDVTVLVVGATGYIGKFVVRELV-----RRGYNVVAVAREKSGIRGKNGKEDTKKELPGAE-VVFGDVTDADSLRKVLFS 132 (390)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEEechhhccccchhhHHhhhcCCce-EEEeeCCCHHHHHHHHHH
Confidence 45789999999999999999999 68999999999764311 0135789 999999999999999886
Q ss_pred cccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCc
Q 028258 79 ISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFK 158 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~ 158 (211)
....+|+||||++.......+.+++|..++.++++++++. ++++|+++|+..+|. |..
T Consensus 133 ~~~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~-----gv~r~V~iSS~~v~~-----------------p~~ 190 (390)
T PLN02657 133 EGDPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREV-----GAKHFVLLSAICVQK-----------------PLL 190 (390)
T ss_pred hCCCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHc-----CCCEEEEEeeccccC-----------------cch
Confidence 4212799999987543333456788999999999999886 678999998865442 100
Q ss_pred CCCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 159 EDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 159 e~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
+ ........|+.+..+..+++|+|+||+.+||.
T Consensus 191 ~------~~~sK~~~E~~l~~~~~gl~~tIlRp~~~~~~ 223 (390)
T PLN02657 191 E------FQRAKLKFEAELQALDSDFTYSIVRPTAFFKS 223 (390)
T ss_pred H------HHHHHHHHHHHHHhccCCCCEEEEccHHHhcc
Confidence 0 00112233444432247899999999999985
No 45
>PRK10084 dTDP-glucose 4,6 dehydratase; Provisional
Probab=99.82 E-value=2.7e-19 Score=151.91 Aligned_cols=177 Identities=11% Similarity=0.034 Sum_probs=118.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC-C-----CC-CCCCceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP-G-----WF-PTALVDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~-~-----~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
+|||||||||||++|+++|+ ++|++ |++++|.... . .. ....++ ++.+|++|.+++.+++++..
T Consensus 2 kilITGgtG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~~-- 73 (352)
T PRK10084 2 KILVTGGAGFIGSAVVRHII-----NNTQDSVVNVDKLTYAGNLESLADVSDSERYV-FEHADICDRAELDRIFAQHQ-- 73 (352)
T ss_pred eEEEECCCcHHhHHHHHHHH-----HhCCCeEEEecCCCccchHHHHHhcccCCceE-EEEecCCCHHHHHHHHHhcC--
Confidence 69999999999999999999 57765 6666653211 0 00 124577 89999999999999988653
Q ss_pred cceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCC----CCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 83 ITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSG----RSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 83 ~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~----~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
+|.|||+|+.... ++...+++|+.++.++++++...+.. ..++++|+++||..+|+....+....... .
T Consensus 74 ~d~vih~A~~~~~~~~~~~~~~~~~~N~~gt~~ll~~~~~~~~~~~~~~~~~~~~i~~SS~~vyg~~~~~~~~~~~~--~ 151 (352)
T PRK10084 74 PDAVMHLAAESHVDRSITGPAAFIETNIVGTYVLLEAARNYWSALDEDKKNAFRFHHISTDEVYGDLPHPDEVENSE--E 151 (352)
T ss_pred CCEEEECCcccCCcchhcCchhhhhhhhHHHHHHHHHHHHhccccccccccceeEEEecchhhcCCCCccccccccc--c
Confidence 7999999986431 34567899999999999999763100 01356899999989997421000000000 0
Q ss_pred CCCCcCCCCCCCCCCcchhH-----HHHHhh--cCCCceEEEecCCceEecCC
Q 028258 154 EVPFKEDSSRLPFPNFYYEL-----EDVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~~~-----e~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+++|+.+.. |...|.. |.++.. +..+++++++||+.+|||..
T Consensus 152 ~~~~~E~~~~~--p~~~Y~~sK~~~E~~~~~~~~~~g~~~vilr~~~v~Gp~~ 202 (352)
T PRK10084 152 LPLFTETTAYA--PSSPYSASKASSDHLVRAWLRTYGLPTIVTNCSNNYGPYH 202 (352)
T ss_pred CCCccccCCCC--CCChhHHHHHHHHHHHHHHHHHhCCCEEEEeccceeCCCc
Confidence 12366776642 3333443 333332 34689999999999999974
No 46
>PF04321 RmlD_sub_bind: RmlD substrate binding domain; InterPro: IPR005913 dTDP-4-dehydrorhamnose reductase (1.1.1.133 from EC) catalyzes the last of 4 steps in making dTDP-rhamnose, a precursor of LPS molecules such as core antigen and O-antigen. dTDP-6-deoxy-L-mannose + NADP+ = dTDP-4-dehydro-6-deoxy-L-mannose + NADPH ; GO: 0008831 dTDP-4-dehydrorhamnose reductase activity, 0045226 extracellular polysaccharide biosynthetic process; PDB: 2YDX_D 2YDY_A 3SC6_C 1VL0_B 2GGS_A 1KBZ_A 1KC3_A 1KC1_A 1N2S_A.
Probab=99.82 E-value=6.8e-20 Score=151.87 Aligned_cols=152 Identities=21% Similarity=0.234 Sum_probs=106.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++||||||||++|++|.++|. ..||+|+++.|. .+|+.|.+.+.+.++... +|+||||
T Consensus 1 MriLI~GasG~lG~~l~~~l~-----~~~~~v~~~~r~---------------~~dl~d~~~~~~~~~~~~--pd~Vin~ 58 (286)
T PF04321_consen 1 MRILITGASGFLGSALARALK-----ERGYEVIATSRS---------------DLDLTDPEAVAKLLEAFK--PDVVINC 58 (286)
T ss_dssp EEEEEETTTSHHHHHHHHHHT-----TTSEEEEEESTT---------------CS-TTSHHHHHHHHHHH----SEEEE-
T ss_pred CEEEEECCCCHHHHHHHHHHh-----hCCCEEEEeCch---------------hcCCCCHHHHHHHHHHhC--CCeEecc
Confidence 369999999999999999999 689999999765 378899999999998876 8999999
Q ss_pred cccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 90 PLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 90 a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|+.... ++...+++|+.++.+|.+++... + .+++++||..||.+. ...|++|+++.
T Consensus 59 aa~~~~~~ce~~p~~a~~iN~~~~~~la~~~~~~-----~-~~li~~STd~VFdG~------------~~~~y~E~d~~- 119 (286)
T PF04321_consen 59 AAYTNVDACEKNPEEAYAINVDATKNLAEACKER-----G-ARLIHISTDYVFDGD------------KGGPYTEDDPP- 119 (286)
T ss_dssp -----HHHHHHSHHHHHHHHTHHHHHHHHHHHHC-----T--EEEEEEEGGGS-SS------------TSSSB-TTS---
T ss_pred ceeecHHhhhhChhhhHHHhhHHHHHHHHHHHHc-----C-CcEEEeeccEEEcCC------------cccccccCCCC-
Confidence 988653 45567899999999999999886 2 477899999998642 24578888873
Q ss_pred CCCCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCCC
Q 028258 165 PFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSLY 203 (211)
Q Consensus 165 ~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~~ 203 (211)
.|...|...|+..| +...-+++|+|++.+||+...+++
T Consensus 120 -~P~~~YG~~K~~~E~~v~~~~~~~~IlR~~~~~g~~~~~~~ 160 (286)
T PF04321_consen 120 -NPLNVYGRSKLEGEQAVRAACPNALILRTSWVYGPSGRNFL 160 (286)
T ss_dssp ---SSHHHHHHHHHHHHHHHH-SSEEEEEE-SEESSSSSSHH
T ss_pred -CCCCHHHHHHHHHHHHHHHhcCCEEEEecceecccCCCchh
Confidence 45555555444444 112239999999999999665554
No 47
>COG1091 RfbD dTDP-4-dehydrorhamnose reductase [Cell envelope biogenesis, outer membrane]
Probab=99.82 E-value=2e-19 Score=146.54 Aligned_cols=155 Identities=17% Similarity=0.212 Sum_probs=125.3
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
+||||++|.+|++|++.|. .+++|++++|.. +|++|++.+.+.+.... ||.|||+|+
T Consensus 3 iLi~G~~GqLG~~L~~~l~------~~~~v~a~~~~~---------------~Ditd~~~v~~~i~~~~--PDvVIn~AA 59 (281)
T COG1091 3 ILITGANGQLGTELRRALP------GEFEVIATDRAE---------------LDITDPDAVLEVIRETR--PDVVINAAA 59 (281)
T ss_pred EEEEcCCChHHHHHHHHhC------CCceEEeccCcc---------------ccccChHHHHHHHHhhC--CCEEEECcc
Confidence 9999999999999999986 568999998752 79999999999999875 899999998
Q ss_pred cCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 92 QVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 92 ~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
.+.. .++..+.+|..++.|+.+++.+. + ..++++|+.-||. |. ...|+.|+++ +.
T Consensus 60 yt~vD~aE~~~e~A~~vNa~~~~~lA~aa~~~---g---a~lVhiSTDyVFD---------G~---~~~~Y~E~D~--~~ 119 (281)
T COG1091 60 YTAVDKAESEPELAFAVNATGAENLARAAAEV---G---ARLVHISTDYVFD---------GE---KGGPYKETDT--PN 119 (281)
T ss_pred ccccccccCCHHHHHHhHHHHHHHHHHHHHHh---C---CeEEEeecceEec---------CC---CCCCCCCCCC--CC
Confidence 8653 34567899999999999999987 3 3567888766654 43 2467889887 35
Q ss_pred CCcchhHHHHHhh---cCCCceEEEecCCceEecCCCCCCCCCCCC
Q 028258 167 PNFYYELEDVSAS---YSPAITYSVHRSSVIIGASPRSLYXXXXXX 209 (211)
Q Consensus 167 ~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~~~~~~~~~~~~ 209 (211)
|..+|...|++.| +..+-..+|+|.+++||...+||...++.+
T Consensus 120 P~nvYG~sKl~GE~~v~~~~~~~~I~Rtswv~g~~g~nFv~tml~l 165 (281)
T COG1091 120 PLNVYGRSKLAGEEAVRAAGPRHLILRTSWVYGEYGNNFVKTMLRL 165 (281)
T ss_pred ChhhhhHHHHHHHHHHHHhCCCEEEEEeeeeecCCCCCHHHHHHHH
Confidence 6778888888777 456679999999999999888886555443
No 48
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.81 E-value=3.4e-19 Score=162.78 Aligned_cols=165 Identities=18% Similarity=0.144 Sum_probs=113.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHH--HHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTD--TALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~--~~~~~~~~~~ 81 (211)
+|||||||||||++|+++|+++ ..|++|++++|+..... ....+++ ++.+|++|++. ....++.+..
T Consensus 2 ~ILVTGatGfIG~~lv~~Ll~~---~~g~~V~~l~R~~~~~~~~~~~~~~~~~~v~-~~~~Dl~~~~~~~~~~~~~~l~~ 77 (657)
T PRK07201 2 RYFVTGGTGFIGRRLVSRLLDR---RREATVHVLVRRQSLSRLEALAAYWGADRVV-PLVGDLTEPGLGLSEADIAELGD 77 (657)
T ss_pred eEEEeCCccHHHHHHHHHHHhc---CCCCEEEEEECcchHHHHHHHHHhcCCCcEE-EEecccCCccCCcCHHHHHHhcC
Confidence 6999999999999999999931 36899999999653210 0125688 99999998531 0111222222
Q ss_pred ccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 82 EITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 82 ~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
+|+|||||+... .++....++|+.++.++++++.+. ++++|+++||..+|+.. ..+.+|
T Consensus 78 -~D~Vih~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~~SS~~v~g~~-------------~~~~~e 138 (657)
T PRK07201 78 -IDHVVHLAAIYDLTADEEAQRAANVDGTRNVVELAERL-----QAATFHHVSSIAVAGDY-------------EGVFRE 138 (657)
T ss_pred -CCEEEECceeecCCCCHHHHHHHHhHHHHHHHHHHHhc-----CCCeEEEEeccccccCc-------------cCcccc
Confidence 899999998643 245567789999999999999876 57899999999998742 112333
Q ss_pred CCCCC-CCCCcchh-----HHHHHhhcCCCceEEEecCCceEecCC
Q 028258 160 DSSRL-PFPNFYYE-----LEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 160 ~~~~~-~~~~~~~~-----~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+.... ..+...|. .|+++.+ ..+++++++||+.|||+..
T Consensus 139 ~~~~~~~~~~~~Y~~sK~~~E~~~~~-~~g~~~~ilRp~~v~G~~~ 183 (657)
T PRK07201 139 DDFDEGQGLPTPYHRTKFEAEKLVRE-ECGLPWRVYRPAVVVGDSR 183 (657)
T ss_pred ccchhhcCCCCchHHHHHHHHHHHHH-cCCCcEEEEcCCeeeecCC
Confidence 32111 11112233 3444432 5689999999999999865
No 49
>TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase. This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370).
Probab=99.81 E-value=4.1e-19 Score=148.14 Aligned_cols=161 Identities=14% Similarity=0.035 Sum_probs=110.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh-cccccceEEee
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL-ISQEITNLFWV 89 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~-~~~~~~~v~~~ 89 (211)
|||||||||||+++++.|+ +.|+ +|++++|.........-... .+..|+.+.+.+....+. ... +|+|+|+
T Consensus 1 ilItGatG~iG~~l~~~L~-----~~g~~~v~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~~~-~D~vvh~ 73 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALN-----ERGITDILVVDNLRDGHKFLNLADL-VIADYIDKEDFLDRLEKGAFGK-IEAIFHQ 73 (314)
T ss_pred CEEeCCcchhhHHHHHHHH-----HcCCceEEEEecCCCchhhhhhhhe-eeeccCcchhHHHHHHhhccCC-CCEEEEC
Confidence 6999999999999999999 6887 78888775432211111124 567888887766555441 122 8999999
Q ss_pred cccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCC
Q 028258 90 PLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPF 166 (211)
Q Consensus 90 a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~ 166 (211)
|+... .++...+++|+.++.++++++.+. ++ +|+++||+.+|+.+ ..+.+|+++.. .
T Consensus 74 A~~~~~~~~~~~~~~~~n~~~~~~ll~~~~~~-----~~-~~v~~SS~~vy~~~-------------~~~~~e~~~~~-~ 133 (314)
T TIGR02197 74 GACSDTTETDGEYMMENNYQYSKRLLDWCAEK-----GI-PFIYASSAATYGDG-------------EAGFREGRELE-R 133 (314)
T ss_pred ccccCccccchHHHHHHHHHHHHHHHHHHHHh-----CC-cEEEEccHHhcCCC-------------CCCcccccCcC-C
Confidence 98643 245567789999999999999886 34 68999999999742 12345554422 2
Q ss_pred CCcchhH-----HHHHhh----cCCCceEEEecCCceEecCC
Q 028258 167 PNFYYEL-----EDVSAS----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 167 ~~~~~~~-----e~~l~~----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
|...|.. |.++.+ ...+++++++||+.+||+..
T Consensus 134 p~~~Y~~sK~~~e~~~~~~~~~~~~~~~~~~lR~~~vyG~~~ 175 (314)
T TIGR02197 134 PLNVYGYSKFLFDQYVRRRVLPEALSAQVVGLRYFNVYGPRE 175 (314)
T ss_pred CCCHHHHHHHHHHHHHHHHhHhhccCCceEEEEEeeccCCCC
Confidence 3333433 333332 13467999999999999975
No 50
>TIGR01777 yfcH conserved hypothetical protein TIGR01777. This model represents a clade of proteins of unknown function including the E. coli yfcH protein.
Probab=99.81 E-value=7e-19 Score=145.07 Aligned_cols=157 Identities=13% Similarity=0.119 Sum_probs=102.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|||||||||||++++++|+ ++||+|++++|++...... .... ..|+.. ..+.+.+.+ +|.|||+++
T Consensus 1 vlVtGatG~iG~~l~~~L~-----~~g~~V~~~~r~~~~~~~~-~~~~---~~~~~~-~~~~~~~~~----~D~Vvh~a~ 66 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLT-----KDGHEVTILTRSPPAGANT-KWEG---YKPWAP-LAESEALEG----ADAVINLAG 66 (292)
T ss_pred CEEEcccchhhHHHHHHHH-----HcCCEEEEEeCCCCCCCcc-ccee---eecccc-cchhhhcCC----CCEEEECCC
Confidence 6999999999999999999 6899999999987653210 1011 112222 223333433 789999998
Q ss_pred cCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 92 QVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 92 ~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
.... .+...+++|+.++.++++++++. +.+..++++.|+..+|+.. ...+++|+.+.
T Consensus 67 ~~~~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~---~~~~~~~i~~S~~~~yg~~------------~~~~~~E~~~~- 130 (292)
T TIGR01777 67 EPIADKRWTEERKQEIRDSRIDTTRALVEAIAAA---EQKPKVFISASAVGYYGTS------------EDRVFTEEDSP- 130 (292)
T ss_pred CCcccccCCHHHHHHHHhcccHHHHHHHHHHHhc---CCCceEEEEeeeEEEeCCC------------CCCCcCcccCC-
Confidence 6431 23456788999999999999886 2222456666666777632 13466777642
Q ss_pred CCCCcchh-----HHHHHhh-cCCCceEEEecCCceEecCC
Q 028258 165 PFPNFYYE-----LEDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~~~~~~-----~e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+..++. .|..+.. ++.+++++++||+.+||+..
T Consensus 131 -~~~~~~~~~~~~~e~~~~~~~~~~~~~~ilR~~~v~G~~~ 170 (292)
T TIGR01777 131 -AGDDFLAELCRDWEEAAQAAEDLGTRVVLLRTGIVLGPKG 170 (292)
T ss_pred -CCCChHHHHHHHHHHHhhhchhcCCceEEEeeeeEECCCc
Confidence 2222322 2333322 34689999999999999864
No 51
>PLN00016 RNA-binding protein; Provisional
Probab=99.81 E-value=4.2e-19 Score=152.51 Aligned_cols=151 Identities=19% Similarity=0.162 Sum_probs=110.2
Q ss_pred CCCeEEEE----cCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------------CCCCCceeEEEeeCCCHHH
Q 028258 8 PKSVALII----GVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 8 ~~~~ilVt----GatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------------~~~~~~~~~i~~Dl~d~~~ 71 (211)
++++|||| |||||||++|+++|+ ++||+|++++|++.... +...+++ ++.+|+.|
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~-----~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~~~~v~-~v~~D~~d--- 121 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELV-----KAGHEVTLFTRGKEPSQKMKKEPFSRFSELSSAGVK-TVWGDPAD--- 121 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHH-----HCCCEEEEEecCCcchhhhccCchhhhhHhhhcCce-EEEecHHH---
Confidence 45789999 999999999999999 68999999999865311 0123588 99999977
Q ss_pred HHHHHHhcccccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 72 TALKLSLISQEITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+.+.+.... +|+|||+++. +..++.++++++++. ++++|+++||..+|+...
T Consensus 122 ~~~~~~~~~--~d~Vi~~~~~-----------~~~~~~~ll~aa~~~-----gvkr~V~~SS~~vyg~~~---------- 173 (378)
T PLN00016 122 VKSKVAGAG--FDVVYDNNGK-----------DLDEVEPVADWAKSP-----GLKQFLFCSSAGVYKKSD---------- 173 (378)
T ss_pred HHhhhccCC--ccEEEeCCCC-----------CHHHHHHHHHHHHHc-----CCCEEEEEccHhhcCCCC----------
Confidence 444443322 7899998642 234567899999876 688999999999997421
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
..|..|+.+..+. ......|.++.+ .+++|+++||+.+||+...
T Consensus 174 --~~p~~E~~~~~p~-~sK~~~E~~l~~--~~l~~~ilRp~~vyG~~~~ 217 (378)
T PLN00016 174 --EPPHVEGDAVKPK-AGHLEVEAYLQK--LGVNWTSFRPQYIYGPGNN 217 (378)
T ss_pred --CCCCCCCCcCCCc-chHHHHHHHHHH--cCCCeEEEeceeEECCCCC
Confidence 2355666553221 234555666653 6899999999999998753
No 52
>COG3320 Putative dehydrogenase domain of multifunctional non-ribosomal peptide synthetases and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.80 E-value=2.3e-18 Score=143.84 Aligned_cols=173 Identities=16% Similarity=0.135 Sum_probs=120.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------------C--CCCCCceeEEEeeCCCHH--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------------W--FPTALVDRYITFDALDPT-- 70 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------------~--~~~~~~~~~i~~Dl~d~~-- 70 (211)
+++|+||||||+|++|+++|+. ....+|+|+.|..+.. | ....+++ ++.+|+..+.
T Consensus 1 ~~vlLTGATGFLG~yLl~eLL~----~~~~kv~cLVRA~s~E~a~~RL~~~~~~~~~~~e~~~~ri~-vv~gDl~e~~lG 75 (382)
T COG3320 1 RNVLLTGATGFLGAYLLLELLD----RSDAKVICLVRAQSDEAALARLEKTFDLYRHWDELSADRVE-VVAGDLAEPDLG 75 (382)
T ss_pred CeEEEecCchHhHHHHHHHHHh----cCCCcEEEEEecCCHHHHHHHHHHHhhhhhhhhhhhcceEE-EEecccccccCC
Confidence 5799999999999999999995 3446899999976620 1 1247889 9999999663
Q ss_pred ----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 71 ----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 71 ----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.+..+. +|.|||+++.... ...+....|+.||..+++.+... +.|.+.|+||..++...
T Consensus 76 L~~~~~~~La~~----vD~I~H~gA~Vn~v~pYs~L~~~NVlGT~evlrLa~~g-----k~Kp~~yVSsisv~~~~---- 142 (382)
T COG3320 76 LSERTWQELAEN----VDLIIHNAALVNHVFPYSELRGANVLGTAEVLRLAATG-----KPKPLHYVSSISVGETE---- 142 (382)
T ss_pred CCHHHHHHHhhh----cceEEecchhhcccCcHHHhcCcchHhHHHHHHHHhcC-----CCceeEEEeeeeecccc----
Confidence 23333333 8999999988653 56677789999999999988764 67889999999888532
Q ss_pred cccCCCCCCCCCCcCCCCCC--------CCCCcchhHHHHHhh-cCCCceEEEecCCceEecCCCCCCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRL--------PFPNFYYELEDVSAS-YSPAITYSVHRSSVIIGASPRSLYX 204 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~--------~~~~~~~~~e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~~~~ 204 (211)
.+.+. ..-.+++++.. ....+++..|+++.+ ...|++++|+||+.|.|....+.+|
T Consensus 143 -~~~~~---~~~~~~~~~~~~~~~~~~~GY~~SKwvaE~Lvr~A~~rGLpv~I~Rpg~I~gds~tG~~n 207 (382)
T COG3320 143 -YYSNF---TVDFDEISPTRNVGQGLAGGYGRSKWVAEKLVREAGDRGLPVTIFRPGYITGDSRTGALN 207 (382)
T ss_pred -ccCCC---ccccccccccccccCccCCCcchhHHHHHHHHHHHhhcCCCeEEEecCeeeccCccCccc
Confidence 11110 11122222211 112334455666665 3449999999999999998844444
No 53
>PLN02996 fatty acyl-CoA reductase
Probab=99.79 E-value=3.5e-18 Score=151.22 Aligned_cols=121 Identities=15% Similarity=0.052 Sum_probs=90.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------C--------------CCCCce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------F--------------PTALVD 59 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------~--------------~~~~~~ 59 (211)
.+|+|||||||||+|++|++.|++.. .+--+|+++.|...... + ...+++
T Consensus 10 ~~k~VlvTGaTGFlG~~ll~~LL~~~--~~v~~I~~LvR~~~~~~~~~rl~~~~~~~~~f~~~~~~~~~~~~~~~~~kv~ 87 (491)
T PLN02996 10 ENKTILVTGATGFLAKIFVEKILRVQ--PNVKKLYLLLRASDAKSATQRLHDEVIGKDLFKVLREKLGENLNSLISEKVT 87 (491)
T ss_pred CCCeEEEeCCCcHHHHHHHHHHHhhC--CCCCEEEEEEeCCCCCCHHHHHHHHHhhchHHHHHHHhcchhhhhhhhcCEE
Confidence 46899999999999999999998311 01136899998654210 0 015678
Q ss_pred eEEEeeCCCH-------HHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEE
Q 028258 60 RYITFDALDP-------TDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVAL 130 (211)
Q Consensus 60 ~~i~~Dl~d~-------~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~ 130 (211)
++.+|++++ +.+..++++ +|+|||+|+... .++...+++|+.++.++++++... .++++|++
T Consensus 88 -~i~GDl~~~~LGLs~~~~~~~l~~~----vD~ViH~AA~v~~~~~~~~~~~~Nv~gt~~ll~~a~~~----~~~k~~V~ 158 (491)
T PLN02996 88 -PVPGDISYDDLGVKDSNLREEMWKE----IDIVVNLAATTNFDERYDVALGINTLGALNVLNFAKKC----VKVKMLLH 158 (491)
T ss_pred -EEecccCCcCCCCChHHHHHHHHhC----CCEEEECccccCCcCCHHHHHHHHHHHHHHHHHHHHhc----CCCCeEEE
Confidence 999999843 334555553 799999998754 245667899999999999999874 25789999
Q ss_pred eecCeeeec
Q 028258 131 LTGTKHYMG 139 (211)
Q Consensus 131 ~s~~~~y~~ 139 (211)
+||+.+||.
T Consensus 159 vST~~vyG~ 167 (491)
T PLN02996 159 VSTAYVCGE 167 (491)
T ss_pred EeeeEEecC
Confidence 999999975
No 54
>PF07993 NAD_binding_4: Male sterility protein; InterPro: IPR013120 This family represents the C-terminal NAD-binding region of the male sterility protein from Arabidopsis and Drosophila. A sequence-related jojoba acyl CoA reductase is also included.; PDB: 4DQV_A.
Probab=99.78 E-value=4.2e-19 Score=144.25 Aligned_cols=168 Identities=17% Similarity=0.157 Sum_probs=90.9
Q ss_pred EEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCC------C----C-C---------CCCCceeEEEeeCCCHH-
Q 028258 14 IIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPP------G----W-F---------PTALVDRYITFDALDPT- 70 (211)
Q Consensus 14 VtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~------~----~-~---------~~~~~~~~i~~Dl~d~~- 70 (211)
|||||||+|++|+++|++ ++. +|+++.|.... . . . ...+++ ++.+|++++.
T Consensus 1 lTGaTGflG~~ll~~Ll~-----~~~~~~I~cLvR~~~~~~~~~rl~~~l~~~~~~~~~~~~~~~ri~-~v~GDl~~~~l 74 (249)
T PF07993_consen 1 LTGATGFLGSHLLEELLR-----QPPDVKIYCLVRASSSQSALERLKDALKEYGLWDDLDKEALSRIE-VVEGDLSQPNL 74 (249)
T ss_dssp EE-TTSHHHHHHHHHHHH-----HS-TTEEEEEE-SSSHHHHHHHHHGGG-SS-HHHHH-HHHTTTEE-EEE--TTSGGG
T ss_pred CcCCCcHHHHHHHHHHHc-----CCCCcEEEEEEeCcccccchhhhhhhcccccchhhhhhhhhccEE-EEecccccccc
Confidence 799999999999999994 443 89999997642 0 0 0 147899 9999999874
Q ss_pred -----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 71 -----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 71 -----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
.+....+. +++|||||+.... +..+..++|+.+++++++.+... +.++|+|+||+.+.+..
T Consensus 75 GL~~~~~~~L~~~----v~~IiH~Aa~v~~~~~~~~~~~~NV~gt~~ll~la~~~-----~~~~~~~iSTa~v~~~~--- 142 (249)
T PF07993_consen 75 GLSDEDYQELAEE----VDVIIHCAASVNFNAPYSELRAVNVDGTRNLLRLAAQG-----KRKRFHYISTAYVAGSR--- 142 (249)
T ss_dssp G--HHHHHHHHHH------EEEE--SS-SBS-S--EEHHHHHHHHHHHHHHHTSS-----S---EEEEEEGGGTTS----
T ss_pred CCChHHhhccccc----cceeeecchhhhhcccchhhhhhHHHHHHHHHHHHHhc-----cCcceEEeccccccCCC---
Confidence 23333333 7999999988653 34456789999999999999864 34589999983333211
Q ss_pred ccccCCCCCCCCC--CcCCCCC-CCCCCcchhHHHHHhh-------cCCCceEEEecCCceEecCCCCCCC
Q 028258 144 PSLAGQLMPYEVP--FKEDSSR-LPFPNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASPRSLYX 204 (211)
Q Consensus 144 ~~~~g~~~~~~~~--~~e~~~~-~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~~~~~~ 204 (211)
.+.. .+.+ ..+.... ......-|.+.|++.| ...|++++|+||+.|+|....+..+
T Consensus 143 ---~~~~--~~~~~~~~~~~~~~~~~~~~gY~~SK~~aE~~l~~a~~~~g~p~~I~Rp~~i~g~~~~G~~~ 208 (249)
T PF07993_consen 143 ---PGTI--EEKVYPEEEDDLDPPQGFPNGYEQSKWVAERLLREAAQRHGLPVTIYRPGIIVGDSRTGWWN 208 (249)
T ss_dssp ---TTT----SSS-HHH--EEE--TTSEE-HHHHHHHHHHHHHHHHHHH---EEEEEE-EEE-SSSSS---
T ss_pred ---CCcc--cccccccccccchhhccCCccHHHHHHHHHHHHHHHHhcCCceEEEEecCcccccCCCceee
Confidence 1100 0111 1111110 0112234555555555 2349999999999999965544443
No 55
>PLN00141 Tic62-NAD(P)-related group II protein; Provisional
Probab=99.77 E-value=3.5e-18 Score=138.83 Aligned_cols=163 Identities=10% Similarity=0.075 Sum_probs=110.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCH-HHHHHHH-Hhcccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDP-TDTALKL-SLISQE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~-~~~~~~~-~~~~~~ 82 (211)
.+++||||||||+||++++++|+ .+||+|+++.|++.+.. ....+++ ++.+|++|. +.+.+.+ .+
T Consensus 16 ~~~~ilItGasG~iG~~l~~~L~-----~~g~~V~~~~R~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~l~~~~~~~---- 85 (251)
T PLN00141 16 KTKTVFVAGATGRTGKRIVEQLL-----AKGFAVKAGVRDVDKAKTSLPQDPSLQ-IVRADVTEGSDKLVEAIGDD---- 85 (251)
T ss_pred cCCeEEEECCCcHHHHHHHHHHH-----hCCCEEEEEecCHHHHHHhcccCCceE-EEEeeCCCCHHHHHHHhhcC----
Confidence 45789999999999999999999 68999999999865421 1134688 999999984 5565655 23
Q ss_pred cceEEeecccCCc-hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 83 ITNLFWVPLQVQE-SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 83 ~~~v~~~a~~~~~-~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
+|.||++++.... +....+++|..++.++++++.+. ++++|+++||..+|+... ..+..+..
T Consensus 86 ~d~vi~~~g~~~~~~~~~~~~~n~~~~~~ll~a~~~~-----~~~~iV~iSS~~v~g~~~------------~~~~~~~~ 148 (251)
T PLN00141 86 SDAVICATGFRRSFDPFAPWKVDNFGTVNLVEACRKA-----GVTRFILVSSILVNGAAM------------GQILNPAY 148 (251)
T ss_pred CCEEEECCCCCcCCCCCCceeeehHHHHHHHHHHHHc-----CCCEEEEEccccccCCCc------------ccccCcch
Confidence 7889988775421 22334578888999999999876 678999999988886321 11111111
Q ss_pred CCCCCCCcc----hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 162 SRLPFPNFY----YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~~~~~----~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
........+ ...|+++. ..+++|+++||+.+++...
T Consensus 149 ~~~~~~~~~~~~k~~~e~~l~--~~gi~~~iirpg~~~~~~~ 188 (251)
T PLN00141 149 IFLNLFGLTLVAKLQAEKYIR--KSGINYTIVRPGGLTNDPP 188 (251)
T ss_pred hHHHHHHHHHHHHHHHHHHHH--hcCCcEEEEECCCccCCCC
Confidence 000000001 11233333 4689999999999998653
No 56
>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional
Probab=99.76 E-value=4.1e-18 Score=150.87 Aligned_cols=160 Identities=14% Similarity=0.152 Sum_probs=114.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-----------CCCCceeEEEeeCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-----------PTALVDRYITFDAL 67 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-----------~~~~~~~~i~~Dl~ 67 (211)
...+++|+||||||+|+||++++++|+ +.|++|++++|+..+.. . ...+++ ++.+|++
T Consensus 75 ~~~~~gKvVLVTGATGgIG~aLAr~LL-----k~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~-iV~gDLt 148 (576)
T PLN03209 75 LDTKDEDLAFVAGATGKVGSRTVRELL-----KLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLE-IVECDLE 148 (576)
T ss_pred cccCCCCEEEEECCCCHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceE-EEEecCC
Confidence 344567899999999999999999999 68999999999765321 0 013578 8999999
Q ss_pred CHHHHHHHHHhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 68 DPTDTALKLSLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 68 d~~~~~~~~~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
|.+++.+++.+ +|+|||+++.... ++...+++|..++.++++++... ++++||++||...+..
T Consensus 149 D~esI~~aLgg----iDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~a-----gVgRIV~VSSiga~~~----- 214 (576)
T PLN03209 149 KPDQIGPALGN----ASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVA-----KVNHFILVTSLGTNKV----- 214 (576)
T ss_pred CHHHHHHHhcC----CCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHh-----CCCEEEEEccchhccc-----
Confidence 99998888775 6889999876432 34566789999999999999876 6789999988643210
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFY----YELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ .... .. ..-..+ ...++.+. ..|++|+++||+.++++.
T Consensus 215 ---g--------~p~~-~~-~sk~~~~~~KraaE~~L~--~sGIrvTIVRPG~L~tp~ 257 (576)
T PLN03209 215 ---G--------FPAA-IL-NLFWGVLCWKRKAEEALI--ASGLPYTIVRPGGMERPT 257 (576)
T ss_pred ---C--------cccc-ch-hhHHHHHHHHHHHHHHHH--HcCCCEEEEECCeecCCc
Confidence 0 0000 00 000112 12344443 479999999999998764
No 57
>TIGR01746 Thioester-redct thioester reductase domain. It has been suggested that a NADP-binding motif can be found in the N-terminal portion of this domain that may form a Rossman-type fold.
Probab=99.76 E-value=1.6e-17 Score=140.76 Aligned_cols=162 Identities=17% Similarity=0.131 Sum_probs=110.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCC---------------CCC--C-CCceeEEEeeCCCH-
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPG---------------WFP--T-ALVDRYITFDALDP- 69 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~---------------~~~--~-~~~~~~i~~Dl~d~- 69 (211)
+|||||||||||++|+++|+ ++| ++|+++.|+.... +.. . .+++ ++.+|++++
T Consensus 1 ~vlvtGatG~lG~~l~~~L~-----~~g~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~~v~-~~~~D~~~~~ 74 (367)
T TIGR01746 1 TVLLTGATGFLGAYLLEELL-----RRSTQAKVICLVRAASEEHAMERLREALRSYRLWQEDLARERIE-VVAGDLSEPR 74 (367)
T ss_pred CEEEeccchHHHHHHHHHHH-----hCCCCCEEEEEEccCCHHHHHHHHHHHHHHhCCCCchhhhCCEE-EEeCCcCccc
Confidence 58999999999999999999 566 7799999976521 000 1 4788 999999865
Q ss_pred -----HHHHHHHHhcccccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 70 -----TDTALKLSLISQEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 70 -----~~~~~~~~~~~~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
+.+....++ +|+|||+++... .......+.|+.++.++++++.+. +.++|+++||..+|+...
T Consensus 75 ~gl~~~~~~~~~~~----~d~vih~a~~~~~~~~~~~~~~~nv~g~~~ll~~a~~~-----~~~~~v~iSS~~v~~~~~- 144 (367)
T TIGR01746 75 LGLSDAEWERLAEN----VDTIVHNGALVNWVYPYSELRAANVLGTREVLRLAASG-----RAKPLHYVSTISVLAAID- 144 (367)
T ss_pred CCcCHHHHHHHHhh----CCEEEeCCcEeccCCcHHHHhhhhhHHHHHHHHHHhhC-----CCceEEEEccccccCCcC-
Confidence 234443333 799999998754 234556689999999999999876 567899999998886421
Q ss_pred CccccCCCCCCCCCCcCCCCCCC---CCCcchhH-----HHHHhh-cCCCceEEEecCCceEecCC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLP---FPNFYYEL-----EDVSAS-YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~---~~~~~~~~-----e~~l~~-~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..+..|+.+... .+...|.. |.++.+ ...+++++++||+.++|+..
T Consensus 145 -----------~~~~~~~~~~~~~~~~~~~~Y~~sK~~~E~~~~~~~~~g~~~~i~Rpg~v~G~~~ 199 (367)
T TIGR01746 145 -----------LSTVTEDDAIVTPPPGLAGGYAQSKWVAELLVREASDRGLPVTIVRPGRILGNSY 199 (367)
T ss_pred -----------CCCccccccccccccccCCChHHHHHHHHHHHHHHHhcCCCEEEECCCceeecCC
Confidence 111222222111 11122333 444433 33599999999999999743
No 58
>COG1089 Gmd GDP-D-mannose dehydratase [Cell envelope biogenesis, outer membrane]
Probab=99.76 E-value=1.3e-17 Score=134.13 Aligned_cols=161 Identities=20% Similarity=0.142 Sum_probs=124.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+|++||||-||+-|++|++.|+ +.||+|+++.|+.+... ..++.++ .+.+|++|...+.+++
T Consensus 1 ~~K~ALITGITGQDGsYLa~lLL-----ekGY~VhGi~Rrss~~n~~ri~L~~~~~~~~~~l~-l~~gDLtD~~~l~r~l 74 (345)
T COG1089 1 MGKVALITGITGQDGSYLAELLL-----EKGYEVHGIKRRSSSFNTPRIHLYEDPHLNDPRLH-LHYGDLTDSSNLLRIL 74 (345)
T ss_pred CCceEEEecccCCchHHHHHHHH-----hcCcEEEEEeeccccCCcccceeccccccCCceeE-EEeccccchHHHHHHH
Confidence 46899999999999999999999 79999999999754311 1235688 9999999999999999
Q ss_pred HhcccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCC
Q 028258 77 SLISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLM 151 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~ 151 (211)
+.++ ||-|+|+++++. .++..+.+++..|+.+|+++++.. +++-.+|...|++..||..
T Consensus 75 ~~v~--PdEIYNLaAQS~V~vSFe~P~~T~~~~~iGtlrlLEaiR~~---~~~~~rfYQAStSE~fG~v----------- 138 (345)
T COG1089 75 EEVQ--PDEIYNLAAQSHVGVSFEQPEYTADVDAIGTLRLLEAIRIL---GEKKTRFYQASTSELYGLV----------- 138 (345)
T ss_pred HhcC--chhheeccccccccccccCcceeeeechhHHHHHHHHHHHh---CCcccEEEecccHHhhcCc-----------
Confidence 9987 899999998864 356667788999999999999987 4434677888888888853
Q ss_pred CCCCCCcCCCCCCCCCCcchhHHHHHhh-------cCCCceEEEecCCc
Q 028258 152 PYEVPFKEDSSRLPFPNFYYELEDVSAS-------YSPAITYSVHRSSV 193 (211)
Q Consensus 152 ~~~~~~~e~~~~~~~~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~ 193 (211)
.+.|.+|++|. .|.+.|+..|+-.- ...|+-.+.=+..+
T Consensus 139 -~~~pq~E~TPF--yPrSPYAvAKlYa~W~tvNYResYgl~AcnGILFN 184 (345)
T COG1089 139 -QEIPQKETTPF--YPRSPYAVAKLYAYWITVNYRESYGLFACNGILFN 184 (345)
T ss_pred -ccCccccCCCC--CCCCHHHHHHHHHHheeeehHhhcCceeecceeec
Confidence 26789999986 35666766655433 24566555433333
No 59
>PLN02778 3,5-epimerase/4-reductase
Probab=99.76 E-value=3.4e-17 Score=136.52 Aligned_cols=159 Identities=13% Similarity=0.031 Sum_probs=106.0
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|..+-+.++++|||||||||||++|+++|+ ++|++|+... .|+.|.+.+...++...
T Consensus 1 ~~~~~~~~~~kiLVtG~tGfiG~~l~~~L~-----~~g~~V~~~~------------------~~~~~~~~v~~~l~~~~ 57 (298)
T PLN02778 1 SNGTAGSATLKFLIYGKTGWIGGLLGKLCQ-----EQGIDFHYGS------------------GRLENRASLEADIDAVK 57 (298)
T ss_pred CCCCCCCCCCeEEEECCCCHHHHHHHHHHH-----hCCCEEEEec------------------CccCCHHHHHHHHHhcC
Confidence 445556677899999999999999999999 6899886431 23445556666666554
Q ss_pred cccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 81 QEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+|+.... ++.+.+++|+.++.++++++++. ++++++ .||..+|+.... ...+
T Consensus 58 --~D~ViH~Aa~~~~~~~~~~~~~p~~~~~~Nv~gt~~ll~aa~~~-----gv~~v~-~sS~~vy~~~~~--~p~~---- 123 (298)
T PLN02778 58 --PTHVFNAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCRER-----GLVLTN-YATGCIFEYDDA--HPLG---- 123 (298)
T ss_pred --CCEEEECCcccCCCCchhhhhCHHHHHHHHHHHHHHHHHHHHHh-----CCCEEE-EecceEeCCCCC--CCcc----
Confidence 8999999987531 34567899999999999999987 466544 455577853210 0001
Q ss_pred CCCCCcCCCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecC
Q 028258 153 YEVPFKEDSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+++|+++.. ++...|...|+..+ ... .+..++|++..+|+.
T Consensus 124 ~~~~~~Ee~~p~-~~~s~Yg~sK~~~E~~~~~y-~~~~~lr~~~~~~~~ 170 (298)
T PLN02778 124 SGIGFKEEDTPN-FTGSFYSKTKAMVEELLKNY-ENVCTLRVRMPISSD 170 (298)
T ss_pred cCCCCCcCCCCC-CCCCchHHHHHHHHHHHHHh-hccEEeeecccCCcc
Confidence 023466666532 33345655555554 111 267789998888865
No 60
>PRK05865 hypothetical protein; Provisional
Probab=99.74 E-value=3.9e-17 Score=151.06 Aligned_cols=132 Identities=20% Similarity=0.270 Sum_probs=107.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|+|||||||||++++++|+ ++|++|++++|+..... ..+++ ++.+|++|.+.+.+++++ +|+|||+|
T Consensus 2 kILVTGATGfIGs~La~~Ll-----~~G~~Vv~l~R~~~~~~--~~~v~-~v~gDL~D~~~l~~al~~----vD~VVHlA 69 (854)
T PRK05865 2 RIAVTGASGVLGRGLTARLL-----SQGHEVVGIARHRPDSW--PSSAD-FIAADIRDATAVESAMTG----ADVVAHCA 69 (854)
T ss_pred EEEEECCCCHHHHHHHHHHH-----HCcCEEEEEECCchhhc--ccCce-EEEeeCCCHHHHHHHHhC----CCEEEECC
Confidence 69999999999999999999 68999999999754321 24688 999999999998888875 68999999
Q ss_pred ccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcc
Q 028258 91 LQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 170 (211)
Q Consensus 91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~ 170 (211)
+.... .+++|+.++.++++++.+. ++++|+++||.. .
T Consensus 70 a~~~~----~~~vNv~GT~nLLeAa~~~-----gvkr~V~iSS~~----------------------------------K 106 (854)
T PRK05865 70 WVRGR----NDHINIDGTANVLKAMAET-----GTGRIVFTSSGH----------------------------------Q 106 (854)
T ss_pred Ccccc----hHHHHHHHHHHHHHHHHHc-----CCCeEEEECCcH----------------------------------H
Confidence 76532 4678999999999999886 578888887621 2
Q ss_pred hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 171 YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 171 ~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|+++. ..+++++++||+++||++.
T Consensus 107 ~aaE~ll~--~~gl~~vILRp~~VYGP~~ 133 (854)
T PRK05865 107 PRVEQMLA--DCGLEWVAVRCALIFGRNV 133 (854)
T ss_pred HHHHHHHH--HcCCCEEEEEeceEeCCCh
Confidence 34455554 3689999999999999974
No 61
>KOG0747 consensus Putative NAD+-dependent epimerases [Carbohydrate transport and metabolism]
Probab=99.74 E-value=2.9e-17 Score=131.95 Aligned_cols=168 Identities=15% Similarity=0.090 Sum_probs=123.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC----CCC---CCCCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR----PPP---GWFPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~----~~~---~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+.++|||+.||||++.++.+..+. ..++.+.++.- ... .....++.. +++.|+.+...+...+..-+
T Consensus 6 ~~~vlItgg~gfi~Sn~~~~~~~~~---p~~~~v~idkL~~~s~~~~l~~~~n~p~yk-fv~~di~~~~~~~~~~~~~~- 80 (331)
T KOG0747|consen 6 EKNVLITGGAGFIGSNFINYLVDKY---PDYKFVNLDKLDYCSNLKNLEPVRNSPNYK-FVEGDIADADLVLYLFETEE- 80 (331)
T ss_pred cceEEEecCcCcchhhhhhhcccCC---CCCcEEEEeecccccccchhhhhccCCCce-EeeccccchHHHHhhhccCc-
Confidence 3789999999999999999998432 24555555431 111 112458899 99999999988777776543
Q ss_pred ccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+|.|+|.|+.... ++.+....|+.++..|+++++.. +++++|+++|+..|||+...| + .
T Consensus 81 -id~vihfaa~t~vd~s~~~~~~~~~nnil~t~~Lle~~~~s----g~i~~fvhvSTdeVYGds~~~----------~-~ 144 (331)
T KOG0747|consen 81 -IDTVIHFAAQTHVDRSFGDSFEFTKNNILSTHVLLEAVRVS----GNIRRFVHVSTDEVYGDSDED----------A-V 144 (331)
T ss_pred -hhhhhhhHhhhhhhhhcCchHHHhcCCchhhhhHHHHHHhc----cCeeEEEEecccceecCcccc----------c-c
Confidence 8999999987543 45567788999999999999876 589999999999999975431 1 1
Q ss_pred CcCCCCCCCCCCcchhHHH-----HHhh--cCCCceEEEecCCceEecCC
Q 028258 157 FKEDSSRLPFPNFYYELED-----VSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~-----~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
..|.++ +.|...|+..| .+++ +..+++++++|-++||||+-
T Consensus 145 ~~E~s~--~nPtnpyAasKaAaE~~v~Sy~~sy~lpvv~~R~nnVYGP~q 192 (331)
T KOG0747|consen 145 VGEASL--LNPTNPYAASKAAAEMLVRSYGRSYGLPVVTTRMNNVYGPNQ 192 (331)
T ss_pred cccccc--CCCCCchHHHHHHHHHHHHHHhhccCCcEEEEeccCccCCCc
Confidence 125554 23444454433 3334 67899999999999999864
No 62
>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases. The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.
Probab=99.73 E-value=9.7e-18 Score=137.45 Aligned_cols=148 Identities=16% Similarity=0.103 Sum_probs=98.4
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CC----CCCCcee---EEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WF----PTALVDR---YITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~----~~~~~~~---~i~~Dl~d~~~~~~~~~~~ 79 (211)
||||||+|.||+.||++|++ ..-.++++++|++... .+ .+++++. .+.+|++|.+.+..+++..
T Consensus 1 VLVTGa~GSIGseL~rql~~----~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~ 76 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLR----YGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEY 76 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHC----CB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--
T ss_pred CEEEccccHHHHHHHHHHHh----cCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhc
Confidence 79999999999999999995 3335799999986541 01 2334540 3478999999999999866
Q ss_pred ccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 80 SQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
. +|.|||+|+... .++.+.+++|+.||+|+++++..+ ++++|+++|+.+..
T Consensus 77 ~--pdiVfHaAA~KhVpl~E~~p~eav~tNv~GT~nv~~aa~~~-----~v~~~v~ISTDKAv----------------- 132 (293)
T PF02719_consen 77 K--PDIVFHAAALKHVPLMEDNPFEAVKTNVLGTQNVAEAAIEH-----GVERFVFISTDKAV----------------- 132 (293)
T ss_dssp T---SEEEE------HHHHCCCHHHHHHHHCHHHHHHHHHHHHT-----T-SEEEEEEECGCS-----------------
T ss_pred C--CCEEEEChhcCCCChHHhCHHHHHHHHHHHHHHHHHHHHHc-----CCCEEEEccccccC-----------------
Confidence 5 899999999865 367788999999999999999987 78999999985432
Q ss_pred CCCcCCCCCCCCCCcchhHHHHHhh-------c---CCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDVSAS-------Y---SPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~l~~-------~---~~~~~~~i~Rp~~i~G~~ 198 (211)
.|..-+...|.+.| . ..+..++++|.|+|+|..
T Consensus 133 -----------~PtnvmGatKrlaE~l~~~~~~~~~~~~t~f~~VRFGNVlgS~ 175 (293)
T PF02719_consen 133 -----------NPTNVMGATKRLAEKLVQAANQYSGNSDTKFSSVRFGNVLGSR 175 (293)
T ss_dssp -----------S--SHHHHHHHHHHHHHHHHCCTSSSS--EEEEEEE-EETTGT
T ss_pred -----------CCCcHHHHHHHHHHHHHHHHhhhCCCCCcEEEEEEecceecCC
Confidence 12333333333333 1 235799999999999965
No 63
>PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.73 E-value=9.9e-17 Score=128.85 Aligned_cols=170 Identities=14% Similarity=0.013 Sum_probs=112.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|..++.|++|||||||+||++|+++|+ ++|++|+++.|+..... ....+++ ++.+|++|++++.+.
T Consensus 1 ~~~~~~~~vlItGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~ 74 (249)
T PRK12825 1 MGSLMGRVALVTGAARGLGRAIALRLA-----RAGADVVVHYRSDEEAAEELVEAVEALGRRAQ-AVQADVTDKAALEAA 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCCHHHHHHHHHHHHhcCCceE-EEECCcCCHHHHHHH
Confidence 344455899999999999999999999 68999988777654210 1235678 999999999998888
Q ss_pred HHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++++. ..+|.|||+++.... .+...+++|+.++.++++.+...+. ..+..+++++||...+.+.
T Consensus 75 ~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~i~~SS~~~~~~~--- 150 (249)
T PRK12825 75 VAAAVERFGRIDILVNNAGIFEDKPLADMSDDEWDEVIDVNLSGVFHLLRAVVPPMR-KQRGGRIVNISSVAGLPGW--- 150 (249)
T ss_pred HHHHHHHcCCCCEEEECCccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECccccCCCC---
Confidence 76651 128999999985322 2345678899998888888743210 1145788888876544210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCCC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.... .........+.+... ...+++++++||+.++|+...
T Consensus 151 --------------~~~~---~y~~sK~~~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~~ 195 (249)
T PRK12825 151 --------------PGRS---NYAAAKAGLVGLTKALARELAEYGITVNMVAPGDIDTDMKE 195 (249)
T ss_pred --------------CCch---HHHHHHHHHHHHHHHHHHHHhhcCeEEEEEEECCccCCccc
Confidence 0000 000011112222211 246899999999999998753
No 64
>PRK12320 hypothetical protein; Provisional
Probab=99.73 E-value=8.3e-17 Score=146.16 Aligned_cols=136 Identities=17% Similarity=0.146 Sum_probs=102.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+|||||||||||++|+++|+ ++||+|++++|.+... ..++++ ++.+|++|+. +.+.+.+ +|.|||++
T Consensus 2 kILVTGAaGFIGs~La~~Ll-----~~G~~Vi~ldr~~~~~--~~~~ve-~v~~Dl~d~~-l~~al~~----~D~VIHLA 68 (699)
T PRK12320 2 QILVTDATGAVGRSVTRQLI-----AAGHTVSGIAQHPHDA--LDPRVD-YVCASLRNPV-LQELAGE----ADAVIHLA 68 (699)
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCEEEEEeCChhhc--ccCCce-EEEccCCCHH-HHHHhcC----CCEEEEcC
Confidence 69999999999999999999 6899999999875532 235788 9999999984 5555554 78999999
Q ss_pred ccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcc
Q 028258 91 LQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY 170 (211)
Q Consensus 91 ~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~ 170 (211)
+..... ...+|+.++.|+++++++. ++ +++++||. ||.+ ..|
T Consensus 69 a~~~~~---~~~vNv~Gt~nLleAA~~~-----Gv-RiV~~SS~--~G~~---------------------------~~~ 110 (699)
T PRK12320 69 PVDTSA---PGGVGITGLAHVANAAARA-----GA-RLLFVSQA--AGRP---------------------------ELY 110 (699)
T ss_pred ccCccc---hhhHHHHHHHHHHHHHHHc-----CC-eEEEEECC--CCCC---------------------------ccc
Confidence 764322 2357999999999999886 44 57888764 3211 012
Q ss_pred hhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 171 YELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 171 ~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
...|.++.. .+++++++|++++||++.
T Consensus 111 ~~aE~ll~~--~~~p~~ILR~~nVYGp~~ 137 (699)
T PRK12320 111 RQAETLVST--GWAPSLVIRIAPPVGRQL 137 (699)
T ss_pred cHHHHHHHh--cCCCEEEEeCceecCCCC
Confidence 234666543 568999999999999854
No 65
>PLN02503 fatty acyl-CoA reductase 2
Probab=99.73 E-value=1.5e-16 Score=142.79 Aligned_cols=122 Identities=13% Similarity=0.045 Sum_probs=89.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CC-------------------CCCCce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WF-------------------PTALVD 59 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~-------------------~~~~~~ 59 (211)
..|+|||||||||+|++|++.|++.. .+--+|+++.|..... .. ...+++
T Consensus 118 ~~k~VlVTGaTGFLGk~LlekLLr~~--~~v~kIy~LvR~k~~~~a~eRl~~~l~~~~lf~~l~~~~g~~~~~~~~~Ki~ 195 (605)
T PLN02503 118 RGKNFLITGATGFLAKVLIEKILRTN--PDVGKIYLLIKAKDKEAAIERLKNEVIDAELFKCLQETHGKSYQSFMLSKLV 195 (605)
T ss_pred cCCEEEEcCCchHHHHHHHHHHHHhC--CCCcEEEEEEecCCchhHHHHHHHHHhhhhhHHHHHHhcCccccccccccEE
Confidence 36899999999999999999999311 0113689999864320 00 024578
Q ss_pred eEEEeeCCCHH-----HHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 60 RYITFDALDPT-----DTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 60 ~~i~~Dl~d~~-----~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
.+.+|+++++ +..+.+.. . +|+|||+|+.... ++...+++|+.++.++++++... .++++|+++|
T Consensus 196 -~v~GDl~d~~LGLs~~~~~~L~~--~-vDiVIH~AA~v~f~~~~~~a~~vNV~GT~nLLelA~~~----~~lk~fV~vS 267 (605)
T PLN02503 196 -PVVGNVCESNLGLEPDLADEIAK--E-VDVIINSAANTTFDERYDVAIDINTRGPCHLMSFAKKC----KKLKLFLQVS 267 (605)
T ss_pred -EEEeeCCCcccCCCHHHHHHHHh--c-CCEEEECccccccccCHHHHHHHHHHHHHHHHHHHHHc----CCCCeEEEcc
Confidence 8999999972 32233322 2 7999999988653 46677899999999999999875 3578899999
Q ss_pred cCeeeec
Q 028258 133 GTKHYMG 139 (211)
Q Consensus 133 ~~~~y~~ 139 (211)
++.+||.
T Consensus 268 TayVyG~ 274 (605)
T PLN02503 268 TAYVNGQ 274 (605)
T ss_pred CceeecC
Confidence 9999975
No 66
>PRK06179 short chain dehydrogenase; Provisional
Probab=99.72 E-value=3.1e-16 Score=128.31 Aligned_cols=160 Identities=16% Similarity=0.183 Sum_probs=111.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~~ 84 (211)
.+++++||||||+||++++++|+ ++|++|++++|++.... ...+++ ++.+|++|++++.++++.+.. .+|
T Consensus 3 ~~~~vlVtGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~-~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~g~~d 75 (270)
T PRK06179 3 NSKVALVTGASSGIGRATAEKLA-----RAGYRVFGTSRNPARAA-PIPGVE-LLELDVTDDASVQAAVDEVIARAGRID 75 (270)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCChhhcc-ccCCCe-eEEeecCCHHHHHHHHHHHHHhCCCCC
Confidence 45789999999999999999999 68999999999865432 235788 999999999998888876521 279
Q ss_pred eEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCC
Q 028258 85 NLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEV 155 (211)
Q Consensus 85 ~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~ 155 (211)
.+||+++.... ++...+++|+.++.++++++...+. ..+..+|+++||...+.. .
T Consensus 76 ~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~iv~isS~~~~~~---------------~ 139 (270)
T PRK06179 76 VLVNNAGVGLAGAAEESSIAQAQALFDTNVFGILRMTRAVLPHMR-AQGSGRIINISSVLGFLP---------------A 139 (270)
T ss_pred EEEECCCCCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEECCccccCC---------------C
Confidence 99999986421 3456788999888888887643211 114578888887543321 0
Q ss_pred CCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 156 PFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 156 ~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
| ....|.. .+.+... ...+++++++||+.+.++..
T Consensus 140 ~---------~~~~Y~~sK~a~~~~~~~l~~el~~~gi~v~~v~pg~~~t~~~ 183 (270)
T PRK06179 140 P---------YMALYAASKHAVEGYSESLDHEVRQFGIRVSLVEPAYTKTNFD 183 (270)
T ss_pred C---------CccHHHHHHHHHHHHHHHHHHHHhhhCcEEEEEeCCCcccccc
Confidence 0 0111221 2222111 35799999999999987644
No 67
>PRK06482 short chain dehydrogenase; Provisional
Probab=99.71 E-value=2.9e-16 Score=128.95 Aligned_cols=119 Identities=13% Similarity=-0.010 Sum_probs=88.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
.|++|||||||+||++++++|+ ++|++|+++.|++.... ....+++ ++.+|++|.+++.+.++.+. .
T Consensus 2 ~k~vlVtGasg~IG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 75 (276)
T PRK06482 2 SKTWFITGASSGFGRGMTERLL-----ARGDRVAATVRRPDALDDLKARYGDRLW-VLQLDVTDSAAVRAVVDRAFAALG 75 (276)
T ss_pred CCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCceE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 5789999999999999999999 68999999999764311 1124678 89999999998877765421 1
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|+|||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 76 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~~sS~ 136 (276)
T PRK06482 76 RIDVVVSNAGYGLFGAAEELSDAQIRRQIDTNLIGSIQVIRAALPHLR-RQGGGRIVQVSSE 136 (276)
T ss_pred CCCEEEECCCCCCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcCc
Confidence 27999999986431 2345678999999999998743210 1135688888774
No 68
>PRK09135 pteridine reductase; Provisional
Probab=99.71 E-value=3.6e-16 Score=125.90 Aligned_cols=109 Identities=15% Similarity=0.068 Sum_probs=83.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~---~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|.+++.+++|||||+|+||++++++|+ +.|++|++++|+.... . .....+. ++.+|++|.+++..
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~ 74 (249)
T PRK09135 1 MMTDSAKVALITGGARRIGAAIARTLH-----AAGYRVAIHYHRSAAEADALAAELNALRPGSAA-ALQADLLDPDALPE 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceE-EEEcCCCCHHHHHH
Confidence 344556899999999999999999999 6899999999874321 0 0123577 88999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++.+.. .+|+|||+++... .++...+++|+.++.++++++...
T Consensus 75 ~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~ 130 (249)
T PRK09135 75 LVAACVAAFGRLDALVNNASSFYPTPLGSITEAQWDDLFASNLKAPFFLSQAAAPQ 130 (249)
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhchhHHHHHHHHHHH
Confidence 8776421 2799999998532 124557789999999999998754
No 69
>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed
Probab=99.71 E-value=2.9e-16 Score=126.63 Aligned_cols=165 Identities=12% Similarity=-0.071 Sum_probs=112.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|.++++|++|||||+|++|++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.+
T Consensus 1 ~~~~~~~~ilItGasg~iG~~l~~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~ 74 (251)
T PRK12826 1 TRDLEGRVALVTGAARGIGRAIAVRLA-----ADGAEVIVVDICGDDAAATAELVEAAGGKAR-ARQVDVRDRAALKAAV 74 (251)
T ss_pred CCCCCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHH
Confidence 345567899999999999999999999 68999999999854210 1124578 8999999999988887
Q ss_pred Hhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 77 SLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
+.+.. .+|+|||+++.... ++...++.|+.++.++++++...+. ..+.++|+++||...++.+
T Consensus 75 ~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~ss~~~~~~~---- 149 (251)
T PRK12826 75 AAGVEDFGRLDILVANAGIFPLTPFAEMDDEQWERVIDVNLTGTFLLTQAALPALI-RAGGGRIVLTSSVAGPRVG---- 149 (251)
T ss_pred HHHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCcEEEEEechHhhccC----
Confidence 75521 28999999976432 3345678899999888887753210 0134678888875443111
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhH-----HHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYEL-----EDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~-----e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .....|.. +.++.. ...+++++++||+.++|+..
T Consensus 150 ------------~--------~~~~~y~~sK~a~~~~~~~~~~~~~~~~i~~~~i~pg~~~~~~~ 194 (251)
T PRK12826 150 ------------Y--------PGLAHYAASKAGLVGFTRALALELAARNITVNSVHPGGVDTPMA 194 (251)
T ss_pred ------------C--------CCccHHHHHHHHHHHHHHHHHHHHHHcCeEEEEEeeCCCCcchh
Confidence 0 00111221 222221 24689999999999999864
No 70
>PRK06180 short chain dehydrogenase; Provisional
Probab=99.70 E-value=6.5e-16 Score=127.17 Aligned_cols=123 Identities=16% Similarity=0.042 Sum_probs=91.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+.++++..
T Consensus 3 ~~~~vlVtGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~ 76 (277)
T PRK06180 3 SMKTWLITGVSSGFGRALAQAAL-----AAGHRVVGTVRSEAARADFEALHPDRAL-ARLLDVTDFDAIDAVVADAEATF 76 (277)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----hCcCEEEEEeCCHHHHHHHHhhcCCCee-EEEccCCCHHHHHHHHHHHHHHh
Confidence 45889999999999999999999 68999999999765321 1124577 889999999988887775421
Q ss_pred -ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 -EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 -~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|+|||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||...+
T Consensus 77 ~~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~~~iv~iSS~~~~ 141 (277)
T PRK06180 77 GPIDVLVNNAGYGHEGAIEESPLAEMRRQFEVNVFGAVAMTKAVLPGMR-ARRRGHIVNITSMGGL 141 (277)
T ss_pred CCCCEEEECCCccCCcccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh-ccCCCEEEEEeccccc
Confidence 27999999986421 2345689999999999998654321 1134578888875433
No 71
>COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.70 E-value=5.1e-16 Score=135.45 Aligned_cols=154 Identities=16% Similarity=0.137 Sum_probs=118.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+||||||+|=||+.+|+++++ ..--+++.++|++.+. .+....+. ++-+|+.|.+.+..++++
T Consensus 249 ~gK~vLVTGagGSiGsel~~qil~----~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~-~~igdVrD~~~~~~~~~~ 323 (588)
T COG1086 249 TGKTVLVTGGGGSIGSELCRQILK----FNPKEIILFSRDEYKLYLIDMELREKFPELKLR-FYIGDVRDRDRVERAMEG 323 (588)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHh----cCCCEEEEecCchHHHHHHHHHHHhhCCCcceE-EEecccccHHHHHHHHhc
Confidence 479999999999999999999995 3334588899987641 11236677 889999999999999999
Q ss_pred cccccceEEeecccCC-----chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 79 ISQEITNLFWVPLQVQ-----ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~-----~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
.+ ||.|||+|+... .++.+.+++|+.||.|+++++.+. ++++|+.+|+.+.-
T Consensus 324 ~k--vd~VfHAAA~KHVPl~E~nP~Eai~tNV~GT~nv~~aa~~~-----~V~~~V~iSTDKAV---------------- 380 (588)
T COG1086 324 HK--VDIVFHAAALKHVPLVEYNPEEAIKTNVLGTENVAEAAIKN-----GVKKFVLISTDKAV---------------- 380 (588)
T ss_pred CC--CceEEEhhhhccCcchhcCHHHHHHHhhHhHHHHHHHHHHh-----CCCEEEEEecCccc----------------
Confidence 87 899999999854 278888999999999999999987 89999999874321
Q ss_pred CCCCcCCCCCCCCCCcch----hHHHHHhh--c-CC--CceEEEecCCceEecCCCC
Q 028258 154 EVPFKEDSSRLPFPNFYY----ELEDVSAS--Y-SP--AITYSVHRSSVIIGASPRS 201 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~~----~~e~~l~~--~-~~--~~~~~i~Rp~~i~G~~~~~ 201 (211)
.+.+.+. ..|+.+.. + .. +-.++.+|.|+|+|.+ |+
T Consensus 381 -----------~PtNvmGaTKr~aE~~~~a~~~~~~~~~T~f~~VRFGNVlGSr-GS 425 (588)
T COG1086 381 -----------NPTNVMGATKRLAEKLFQAANRNVSGTGTRFCVVRFGNVLGSR-GS 425 (588)
T ss_pred -----------CCchHhhHHHHHHHHHHHHHhhccCCCCcEEEEEEecceecCC-CC
Confidence 1122222 23444433 2 22 4799999999999975 44
No 72
>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.70 E-value=4.7e-16 Score=126.38 Aligned_cols=163 Identities=11% Similarity=-0.030 Sum_probs=107.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|++|||||||+||++++++|+ +.|++|++++|++.... .....+. ++.+|++|.+.+.++++.
T Consensus 4 ~~~~~~vlItGasg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 77 (262)
T PRK13394 4 NLNGKTAVVTGAASGIGKEIALELA-----RAGAAVAIADLNQDGANAVADEINKAGGKAI-GVAMDVTNEDAVNAGIDK 77 (262)
T ss_pred cCCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCChHHHHHHHHHHHhcCceEE-EEECCCCCHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999874311 0124567 899999999988877765
Q ss_pred cc---cccceEEeecccCCc---------hhHHHHhhcHHH----HHHHHHHH-HhcCCCCCCceEEEEeecCeeeeccc
Q 028258 79 IS---QEITNLFWVPLQVQE---------SEEVNIFKNSTM----LKNVLSVL-VSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~----~~~l~~~~-~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
+. ..+|+|||+++.... .+...+++|+.+ +.++++.+ +.. +.++|+++||...+..
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~-----~~~~iv~~ss~~~~~~-- 150 (262)
T PRK13394 78 VAERFGSVDILVSNAGIQIVNPIENYSFADWKKMQAIHVDGAFLTTKAALKHMYKDD-----RGGVVIYMGSVHSHEA-- 150 (262)
T ss_pred HHHHcCCCCEEEECCccCCCCchhhCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhhc-----CCcEEEEEcchhhcCC--
Confidence 42 127999999986321 234556789888 55566666 332 4678888887432210
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHh---h--cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSA---S--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~---~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+.. .. ........+.+.+ . ...+++++++||+.++++..
T Consensus 151 -------------~~~~--~~---y~~sk~a~~~~~~~la~~~~~~~i~v~~v~pg~v~~~~~ 195 (262)
T PRK13394 151 -------------SPLK--SA---YVTAKHGLLGLARVLAKEGAKHNVRSHVVCPGFVRTPLV 195 (262)
T ss_pred -------------CCCC--cc---cHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcccchhh
Confidence 0000 00 0001111222221 1 24689999999999999853
No 73
>PRK08264 short chain dehydrogenase; Validated
Probab=99.70 E-value=8.9e-16 Score=123.20 Aligned_cols=162 Identities=15% Similarity=0.039 Sum_probs=112.7
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
++++.++++||||||+||++++++|+ ++|+ +|++++|++.+......+++ ++.+|++|++++.+.++.... +
T Consensus 2 ~~~~~~~vlItGgsg~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-i 74 (238)
T PRK08264 2 MDIKGKVVLVTGANRGIGRAFVEQLL-----ARGAAKVYAAARDPESVTDLGPRVV-PLQLDVTDPASVAAAAEAASD-V 74 (238)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHH-----HCCcccEEEEecChhhhhhcCCceE-EEEecCCCHHHHHHHHHhcCC-C
Confidence 33456899999999999999999999 6898 89999997664321235788 999999999999988887654 8
Q ss_pred ceEEeeccc-CC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCC
Q 028258 84 TNLFWVPLQ-VQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPY 153 (211)
Q Consensus 84 ~~v~~~a~~-~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~ 153 (211)
|.|||+++. .. ..+...+++|+.++.++++++...+. ..+..+|+++||...|.+.
T Consensus 75 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~~~~~~------------- 140 (238)
T PRK08264 75 TILVNNAGIFRTGSLLLEGDEDALRAEMETNYFGPLAMARAFAPVLA-ANGGGAIVNVLSVLSWVNF------------- 140 (238)
T ss_pred CEEEECCCcCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhccCC-------------
Confidence 999999986 21 13445678899999888888764310 0134568888775443210
Q ss_pred CCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 154 EVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 154 ~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+....| ...+.+... ...+++++++||+.+.++-
T Consensus 141 -----------~~~~~y~~sK~a~~~~~~~l~~~~~~~~i~~~~v~pg~v~t~~ 183 (238)
T PRK08264 141 -----------PNLGTYSASKAAAWSLTQALRAELAPQGTRVLGVHPGPIDTDM 183 (238)
T ss_pred -----------CCchHhHHHHHHHHHHHHHHHHHhhhcCeEEEEEeCCcccccc
Confidence 011112 222222221 3468999999999997764
No 74
>PRK05993 short chain dehydrogenase; Provisional
Probab=99.69 E-value=4e-16 Score=128.46 Aligned_cols=116 Identities=17% Similarity=0.192 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc----cc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS----QE 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~ 82 (211)
|+|+++||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|++|++++.++++.+. ..
T Consensus 3 ~~k~vlItGasggiG~~la~~l~-----~~G~~Vi~~~r~~~~~~~l~~~~~~-~~~~Dl~d~~~~~~~~~~~~~~~~g~ 76 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQ-----SDGWRVFATCRKEEDVAALEAEGLE-AFQLDYAEPESIAALVAQVLELSGGR 76 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHCCce-EEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 56899999999999999999999 68999999999865421 1224678 89999999998888776641 13
Q ss_pred cceEEeecccCCc---------hhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 83 ITNLFWVPLQVQE---------SEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 83 ~~~v~~~a~~~~~---------~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+|.+||+|+.... .+...+++|+.+ ++++++.+.+. +..+|+++||.
T Consensus 77 id~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~l~~~~~~-----~~g~iv~isS~ 136 (277)
T PRK05993 77 LDALFNNGAYGQPGAVEDLPTEALRAQFEANFFGWHDLTRRVIPVMRKQ-----GQGRIVQCSSI 136 (277)
T ss_pred ccEEEECCCcCCCCCcccCCHHHHHHHHhHHhHHHHHHHHHHHHHHhhc-----CCCEEEEECCh
Confidence 8999999875321 234567899988 45555555544 35688888874
No 75
>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional
Probab=99.69 E-value=1e-15 Score=124.04 Aligned_cols=166 Identities=13% Similarity=-0.031 Sum_probs=107.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|++|||||||+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.++++.+
T Consensus 2 ~~~~~vlItG~sg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 75 (258)
T PRK12429 2 LKGKVALVTGAASGIGLEIALALA-----KEGAKVVIADLNDEAAAAAAEALQKAGGKAI-GVAMDVTDEEAINAGIDYA 75 (258)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 345899999999999999999999 68999999999865421 0134678 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|.|||+++.... .....+++|+.++.++++.+...+. ..+.++|+++||...+.+.
T Consensus 76 ~~~~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~~~~------- 147 (258)
T PRK12429 76 VETFGGVDILVNNAGIQHVAPIEDFPTEKWKKMIAIMLDGAFLTTKAALPIMK-AQGGGRIINMASVHGLVGS------- 147 (258)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhcchhhHHHHHHHHHHHH-hcCCeEEEEEcchhhccCC-------
Confidence 21 28999999975321 2334567888885555554433210 0146789988875433210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHH---HHHhh--cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELE---DVSAS--YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e---~~l~~--~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ........+ +.+.. ...++.+.++||+.++++..
T Consensus 148 ----------~~~~~---y~~~k~a~~~~~~~l~~~~~~~~i~v~~~~pg~v~~~~~ 191 (258)
T PRK12429 148 ----------AGKAA---YVSAKHGLIGLTKVVALEGATHGVTVNAICPGYVDTPLV 191 (258)
T ss_pred ----------CCcch---hHHHHHHHHHHHHHHHHHhcccCeEEEEEecCCCcchhh
Confidence 00000 000111111 12211 34689999999999998764
No 76
>PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.68 E-value=1.1e-15 Score=124.00 Aligned_cols=166 Identities=15% Similarity=0.031 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.++++.+
T Consensus 1 ~~k~vlItG~sg~iG~~la~~L~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (256)
T PRK12745 1 MRPVALVTGGRRGIGLGIARALA-----AAGFDLAINDRPDDEELAATQQELRALGVEVI-FFPADVADLSAHEAMLDAA 74 (256)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754210 0124678 8999999999888877665
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCC--CC---CceEEEEeecCeeeecc
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSG--RS---RLRHVALLTGTKHYMGP 140 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~--~~---~~~~~~~~s~~~~y~~~ 140 (211)
.. .+|.+||+++... ..+.+.+++|+.++.++++++...+.. .. ...+|+++||...+.+.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~~iv~~sS~~~~~~~ 154 (256)
T PRK12745 75 QAAWGRIDCLVNNAGVGVKVRGDLLDLTPESFDRVLAINLRGPFFLTQAVAKRMLAQPEPEELPHRSIVFVSSVNAIMVS 154 (256)
T ss_pred HHhcCCCCEEEECCccCCCCCCChhhCCHHHHHHHHHhcchHHHHHHHHHHHHHHhccCcCCCCCcEEEEECChhhccCC
Confidence 21 2899999997632 134456789999998988887553210 11 15678888875443210
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ....+...+.+... ...+++++++||+.+.++..
T Consensus 155 -----------------~~~~~---Y~~sK~a~~~~~~~l~~~~~~~gi~v~~i~pg~v~t~~~ 198 (256)
T PRK12745 155 -----------------PNRGE---YCISKAGLSMAAQLFAARLAEEGIGVYEVRPGLIKTDMT 198 (256)
T ss_pred -----------------CCCcc---cHHHHHHHHHHHHHHHHHHHHhCCEEEEEecCCCcCccc
Confidence 00010 00111222222221 24689999999999988643
No 77
>PRK09186 flagellin modification protein A; Provisional
Probab=99.68 E-value=1.7e-15 Score=122.80 Aligned_cols=171 Identities=14% Similarity=0.078 Sum_probs=107.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||||+||+++++.|+ ++|++|+++.|++++.. .....+. ++.+|++|++++.++++
T Consensus 2 ~~~k~vlItGas~giG~~~a~~l~-----~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~~~~~~~ 75 (256)
T PRK09186 2 LKGKTILITGAGGLIGSALVKAIL-----EAGGIVIAADIDKEALNELLESLGKEFKSKKLS-LVELDITDQESLEEFLS 75 (256)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecChHHHHHHHHHHHhhcCCCcee-EEEecCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999998765310 1123456 77999999998888877
Q ss_pred hccc---ccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccC
Q 028258 78 LISQ---EITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIF 142 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~ 142 (211)
.+.. .+|++||+|+... ..+...+++|+.++..+++++...+... +..+|+++||...+..+
T Consensus 76 ~~~~~~~~id~vi~~A~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~iv~~sS~~~~~~~-- 152 (256)
T PRK09186 76 KSAEKYGKIDGAVNCAYPRNKDYGKKFFDVSLDDFNENLSLHLGSSFLFSQQFAKYFKKQ-GGGNLVNISSIYGVVAP-- 152 (256)
T ss_pred HHHHHcCCccEEEECCccccccccCccccCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCceEEEEechhhhccc--
Confidence 6431 2799999986421 1234556778876666555554332101 34688888875443221
Q ss_pred CccccCCCCCCCCCCcCCCCCCCCCCcchhH----HHHH---hh--cCCCceEEEecCCceEecC
Q 028258 143 DPSLAGQLMPYEVPFKEDSSRLPFPNFYYEL----EDVS---AS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 143 ~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~----e~~l---~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+..++.+. ..+..|... +.+. .. ...++++++++|+.++++.
T Consensus 153 -----------~~~~~~~~~~-~~~~~Y~~sK~a~~~l~~~la~e~~~~~i~v~~i~Pg~~~~~~ 205 (256)
T PRK09186 153 -----------KFEIYEGTSM-TSPVEYAAIKAGIIHLTKYLAKYFKDSNIRVNCVSPGGILDNQ 205 (256)
T ss_pred -----------cchhcccccc-CCcchhHHHHHHHHHHHHHHHHHhCcCCeEEEEEecccccCCC
Confidence 0111122221 112223321 2221 11 3578999999999987654
No 78
>PRK07453 protochlorophyllide oxidoreductase; Validated
Probab=99.68 E-value=2.9e-15 Score=125.97 Aligned_cols=129 Identities=17% Similarity=0.132 Sum_probs=94.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|+.+++|+++||||+|+||++++++|+ ++|++|++++|+..+.. .....++ ++.+|++|.+++.+++
T Consensus 1 m~~~~~k~vlVTGas~gIG~~~a~~L~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~ 74 (322)
T PRK07453 1 MSQDAKGTVIITGASSGVGLYAAKALA-----KRGWHVIMACRNLKKAEAAAQELGIPPDSYT-IIHIDLGDLDSVRRFV 74 (322)
T ss_pred CCCCCCCEEEEEcCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhhccCCceE-EEEecCCCHHHHHHHH
Confidence 444567899999999999999999999 68999999999754310 1124678 8999999999888777
Q ss_pred Hhcc---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecCeeee
Q 028258 77 SLIS---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGTKHYM 138 (211)
Q Consensus 77 ~~~~---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~~~y~ 138 (211)
+.+. ..+|++||+|+... ..+...+.+|+.++.++++++...+... ....+|+++||...+.
T Consensus 75 ~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~~~~riV~vsS~~~~~ 150 (322)
T PRK07453 75 DDFRALGKPLDALVCNAAVYMPLLKEPLRSPQGYELSMATNHLGHFLLCNLLLEDLKKSPAPDPRLVILGTVTANP 150 (322)
T ss_pred HHHHHhCCCccEEEECCcccCCCCCCCCCCHHHHHHHHhHHHHHHHHHHHHHHHHHHhCCCCCceEEEEcccccCc
Confidence 6532 12899999998521 1345567999999888888776543111 1135889988876653
No 79
>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.68 E-value=1.3e-15 Score=122.19 Aligned_cols=168 Identities=14% Similarity=0.056 Sum_probs=111.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|+++++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+++++
T Consensus 2 ~~~~~~ilItGasg~iG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 75 (246)
T PRK05653 2 SLQGKTALVTGASRGIGRAIALRLA-----ADGAKVVIYDSNEEAAEALAAELRAAGGEAR-VLVFDVSDEAAVRALIEA 75 (246)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCChhHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHH
Confidence 3345889999999999999999999 68999999999865421 0134677 889999999988888776
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
+.. .+|.|+|+++.... .+...++.|+.+..++++++...+. ..+.++|+++||.....
T Consensus 76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~-~~~~~~ii~~ss~~~~~-------- 146 (246)
T PRK05653 76 AVEAFGALDILVNNAGITRDALLPRMSEEDWDRVIDVNLTGTFNVVRAALPPMI-KARYGRIVNISSVSGVT-------- 146 (246)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECcHHhcc--------
Confidence 421 27999999976432 2345678899998888888854210 11457888887743221
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
+ . ....+ ........+..... ...+++++++||+.++|+...
T Consensus 147 -~-----~---~~~~~---y~~sk~~~~~~~~~l~~~~~~~~i~~~~i~pg~~~~~~~~ 193 (246)
T PRK05653 147 -G-----N---PGQTN---YSAAKAGVIGFTKALALELASRGITVNAVAPGFIDTDMTE 193 (246)
T ss_pred -C-----C---CCCcH---hHhHHHHHHHHHHHHHHHHhhcCeEEEEEEeCCcCCcchh
Confidence 0 0 00000 00111111211111 346899999999999998654
No 80
>PLN02260 probable rhamnose biosynthetic enzyme
Probab=99.67 E-value=4.2e-16 Score=142.98 Aligned_cols=152 Identities=15% Similarity=0.036 Sum_probs=103.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++||||||+||||++|+++|. +.|++|. +..+|++|.+.+...+...+ +|+||
T Consensus 379 ~~mkiLVtGa~G~iG~~l~~~L~-----~~g~~v~------------------~~~~~l~d~~~v~~~i~~~~--pd~Vi 433 (668)
T PLN02260 379 PSLKFLIYGRTGWIGGLLGKLCE-----KQGIAYE------------------YGKGRLEDRSSLLADIRNVK--PTHVF 433 (668)
T ss_pred CCceEEEECCCchHHHHHHHHHH-----hCCCeEE------------------eeccccccHHHHHHHHHhhC--CCEEE
Confidence 34579999999999999999999 6788763 22356778888888887765 89999
Q ss_pred eecccCC---c-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 88 WVPLQVQ---E-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 88 ~~a~~~~---~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
|||+... . ++...+++|+.++.+++++|++. ++++ ++.||..+|+.... .... ...|++|
T Consensus 434 h~Aa~~~~~~~~~~~~~~~~~~~~N~~gt~~l~~a~~~~-----g~~~-v~~Ss~~v~~~~~~---~~~~---~~~p~~E 501 (668)
T PLN02260 434 NAAGVTGRPNVDWCESHKVETIRANVVGTLTLADVCREN-----GLLM-MNFATGCIFEYDAK---HPEG---SGIGFKE 501 (668)
T ss_pred ECCcccCCCCCChHHhCHHHHHHHHhHHHHHHHHHHHHc-----CCeE-EEEcccceecCCcc---cccc---cCCCCCc
Confidence 9998752 1 34567899999999999999987 5555 45566678753100 0000 1246777
Q ss_pred CCCCCCCCCcchhHHHHHhh---cCCCceEEEecCCceEecC
Q 028258 160 DSSRLPFPNFYYELEDVSAS---YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 160 ~~~~~~~~~~~~~~e~~l~~---~~~~~~~~i~Rp~~i~G~~ 198 (211)
+++.. ++...|...|+..+ ... .++.++|+.++||..
T Consensus 502 ~~~~~-~~~~~Yg~sK~~~E~~~~~~-~~~~~~r~~~~~~~~ 541 (668)
T PLN02260 502 EDKPN-FTGSFYSKTKAMVEELLREY-DNVCTLRVRMPISSD 541 (668)
T ss_pred CCCCC-CCCChhhHHHHHHHHHHHhh-hhheEEEEEEecccC
Confidence 76532 23344544444443 112 367888988899765
No 81
>TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family. This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi.
Probab=99.67 E-value=1.2e-15 Score=125.98 Aligned_cols=138 Identities=17% Similarity=0.192 Sum_probs=99.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc--cc-cceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS--QE-ITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~-~~~v~ 87 (211)
+||||||||++|++++++|+ ++|++|++++|++.+.. ..+++ .+.+|+.|++.+.++++..+ .. +|.++
T Consensus 1 ~ilVtGatG~iG~~vv~~L~-----~~g~~V~~~~R~~~~~~--~~~~~-~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~ 72 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQ-----AASVPFLVASRSSSSSA--GPNEK-HVKFDWLDEDTWDNPFSSDDGMEPEISAVY 72 (285)
T ss_pred CEEEEcCCChHHHHHHHHHH-----hCCCcEEEEeCCCcccc--CCCCc-cccccCCCHHHHHHHHhcccCcCCceeEEE
Confidence 48999999999999999999 68999999999887542 35788 88999999999999985322 12 57788
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
+++..... . .....++++++++. ++++|+++|+...+.. .+
T Consensus 73 ~~~~~~~~-~-------~~~~~~~i~aa~~~-----gv~~~V~~Ss~~~~~~---------------------~~----- 113 (285)
T TIGR03649 73 LVAPPIPD-L-------APPMIKFIDFARSK-----GVRRFVLLSASIIEKG---------------------GP----- 113 (285)
T ss_pred EeCCCCCC-h-------hHHHHHHHHHHHHc-----CCCEEEEeeccccCCC---------------------Cc-----
Confidence 88754321 1 12346789999887 7899999987432210 00
Q ss_pred CcchhHHHHHhhcCCCceEEEecCCceEec
Q 028258 168 NFYYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 168 ~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
.....++.+.+ ..+++|+++||+.+++.
T Consensus 114 -~~~~~~~~l~~-~~gi~~tilRp~~f~~~ 141 (285)
T TIGR03649 114 -AMGQVHAHLDS-LGGVEYTVLRPTWFMEN 141 (285)
T ss_pred -hHHHHHHHHHh-ccCCCEEEEeccHHhhh
Confidence 01123445543 24899999999988864
No 82
>PRK06914 short chain dehydrogenase; Provisional
Probab=99.67 E-value=2.8e-15 Score=123.33 Aligned_cols=162 Identities=15% Similarity=0.089 Sum_probs=106.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++|++|||||||++|+++++.|+ ++|++|++++|+++... .....++ ++.+|++|++++.+ ++.
T Consensus 2 ~~k~~lItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~-~~~ 74 (280)
T PRK06914 2 NKKIAIVTGASSGFGLLTTLELA-----KKGYLVIATMRNPEKQENLLSQATQLNLQQNIK-VQQLDVTDQNSIHN-FQL 74 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCcee-EEecCCCCHHHHHH-HHH
Confidence 46889999999999999999999 68999999999765310 0124678 89999999988776 544
Q ss_pred c----ccccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcc
Q 028258 79 I----SQEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPS 145 (211)
Q Consensus 79 ~----~~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~ 145 (211)
+ .. +|+|+|+++.... .+.+.+++|+.++.++++++...+. ..+..+|+++||...+.+.
T Consensus 75 ~~~~~~~-id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~~~~----- 147 (280)
T PRK06914 75 VLKEIGR-IDLLVNNAGYANGGFVEEIPVEEYRKQFETNVFGAISVTQAVLPYMR-KQKSGKIINISSISGRVGF----- 147 (280)
T ss_pred HHHhcCC-eeEEEECCcccccCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEECcccccCCC-----
Confidence 3 22 7999999976431 2344578899998888887643211 1134678888774322110
Q ss_pred ccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 146 LAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 146 ~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
....+ ........+.+... ...+++++++||+.+.++-
T Consensus 148 ------------~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~ 190 (280)
T PRK06914 148 ------------PGLSP---YVSSKYALEGFSESLRLELKPFGIDVALIEPGSYNTNI 190 (280)
T ss_pred ------------CCCch---hHHhHHHHHHHHHHHHHHhhhhCCEEEEEecCCcccch
Confidence 00000 00111222222222 2468999999999998873
No 83
>PRK08263 short chain dehydrogenase; Provisional
Probab=99.67 E-value=1.9e-15 Score=124.22 Aligned_cols=123 Identities=13% Similarity=-0.041 Sum_probs=89.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. .+.+|++|++++.+.++.+.
T Consensus 2 ~~k~vlItGasg~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 75 (275)
T PRK08263 2 MEKVWFITGASRGFGRAWTEAAL-----ERGDRVVATARDTATLADLAEKYGDRLL-PLALDVTDRAAVFAAVETAVEHF 75 (275)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhccCCee-EEEccCCCHHHHHHHHHHHHHHc
Confidence 45899999999999999999999 68999999999765311 1134577 88999999998877766541
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++.... ++...+++|+.++.++++++...+. ..+..+++++||...+
T Consensus 76 ~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~vsS~~~~ 140 (275)
T PRK08263 76 GRLDIVVNNAGYGLFGMIEEVTESEARAQIDTNFFGALWVTQAVLPYLR-EQRSGHIIQISSIGGI 140 (275)
T ss_pred CCCCEEEECCCCccccccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCCEEEEEcChhhc
Confidence 128999999986432 4556788999998777777642210 0134678888875444
No 84
>PRK12827 short chain dehydrogenase; Provisional
Probab=99.66 E-value=3.2e-15 Score=120.42 Aligned_cols=169 Identities=16% Similarity=0.038 Sum_probs=110.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|..+++++++||||+|+||++++++|+ ++|++|++++|...... .....++ ++.+|++|++++
T Consensus 1 ~~~~~~~~ilItGasg~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~ 74 (249)
T PRK12827 1 MASLDSRRVLITGGSGGLGRAIAVRLA-----ADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKAL-GLAFDVRDFAAT 74 (249)
T ss_pred CCCcCCCEEEEECCCChHHHHHHHHHH-----HCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHH
Confidence 334456889999999999999999999 68999998876432110 0124678 899999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHH-hcCCCCCCceEEEEeecCeeeec
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTKHYMG 139 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~s~~~~y~~ 139 (211)
.+.++.+.. .+|.|||+++... .++...+++|..++.++++++. ..+. .....+++++||...+.+
T Consensus 75 ~~~~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~~sS~~~~~~ 153 (249)
T PRK12827 75 RAALDAGVEEFGRLDILVNNAGIATDAAFAELSIEEWDDVIDVNLDGFFNVTQAALPPMIR-ARRGGRIVNIASVAGVRG 153 (249)
T ss_pred HHHHHHHHHHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHh-cCCCeEEEEECCchhcCC
Confidence 777764321 2799999998643 1344567899999999999887 2110 013467888887544421
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. . ... .....+...+.+... ...+++++++||+.+.++..
T Consensus 154 ~-----------------~-~~~--~y~~sK~a~~~~~~~l~~~~~~~~i~~~~i~pg~v~t~~~ 198 (249)
T PRK12827 154 N-----------------R-GQV--NYAASKAGLIGLTKTLANELAPRGITVNAVAPGAINTPMA 198 (249)
T ss_pred C-----------------C-CCc--hhHHHHHHHHHHHHHHHHHhhhhCcEEEEEEECCcCCCcc
Confidence 0 0 000 000111111222211 23589999999999998754
No 85
>PRK06182 short chain dehydrogenase; Validated
Probab=99.66 E-value=2e-15 Score=123.87 Aligned_cols=116 Identities=20% Similarity=0.148 Sum_probs=85.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc---ccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS---QEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~ 83 (211)
.+|+++||||+|+||++++++|+ ++|++|++++|++++.. ....+++ ++.+|++|++++.+.++.+. ..+
T Consensus 2 ~~k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~l~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~~~i 75 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLA-----AQGYTVYGAARRVDKMEDLASLGVH-PLSLDVTDEASIKAAVDTIIAEEGRI 75 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence 35899999999999999999999 68999999999865321 1124588 99999999998888776541 128
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHH----HHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVL----SVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~----~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|++||+++.... ++...+++|+.++..++ +.+++. +..+++++||.
T Consensus 76 d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~-----~~g~iv~isS~ 134 (273)
T PRK06182 76 DVLVNNAGYGSYGAIEDVPIDEARRQFEVNLFGAARLTQLVLPHMRAQ-----RSGRIINISSM 134 (273)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHhc-----CCCEEEEEcch
Confidence 999999986431 34556788988754444 444443 34678888774
No 86
>COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only]
Probab=99.66 E-value=1.1e-15 Score=122.81 Aligned_cols=159 Identities=17% Similarity=0.139 Sum_probs=106.6
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPL 91 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~ 91 (211)
|+|||||||||++|+.+|. ..|++|++++|++++.. .++. +..- ..+.+.+.... .+|+|||+|+
T Consensus 1 IliTGgTGlIG~~L~~~L~-----~~gh~v~iltR~~~~~~---~~~~-~~v~---~~~~~~~~~~~---~~DavINLAG 65 (297)
T COG1090 1 ILITGGTGLIGRALTARLR-----KGGHQVTILTRRPPKAS---QNLH-PNVT---LWEGLADALTL---GIDAVINLAG 65 (297)
T ss_pred CeEeccccchhHHHHHHHH-----hCCCeEEEEEcCCcchh---hhcC-cccc---ccchhhhcccC---CCCEEEECCC
Confidence 6899999999999999999 69999999999988642 1222 1111 11122222221 2899999998
Q ss_pred cCCc--hh-----HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 92 QVQE--SE-----EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 92 ~~~~--~~-----~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
.+-. .| +...+.-+..|+.|++++.+. ..+.+.++..|.+..||.. .+..++|++|.
T Consensus 66 ~~I~~rrWt~~~K~~i~~SRi~~T~~L~e~I~~~---~~~P~~~isaSAvGyYG~~------------~~~~~tE~~~~- 129 (297)
T COG1090 66 EPIAERRWTEKQKEEIRQSRINTTEKLVELIAAS---ETKPKVLISASAVGYYGHS------------GDRVVTEESPP- 129 (297)
T ss_pred CccccccCCHHHHHHHHHHHhHHHHHHHHHHHhc---cCCCcEEEecceEEEecCC------------CceeeecCCCC-
Confidence 7431 12 234455677889999999866 4566766666667777743 24678888652
Q ss_pred CCCCc----chhHHHHHhh-cCCCceEEEecCCceEecCCCCC
Q 028258 165 PFPNF----YYELEDVSAS-YSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 165 ~~~~~----~~~~e~~l~~-~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
...| .++.|+.... ...+..++++|.++|+|+..|.+
T Consensus 130 -g~~Fla~lc~~WE~~a~~a~~~gtRvvllRtGvVLs~~GGaL 171 (297)
T COG1090 130 -GDDFLAQLCQDWEEEALQAQQLGTRVVLLRTGVVLSPDGGAL 171 (297)
T ss_pred -CCChHHHHHHHHHHHHhhhhhcCceEEEEEEEEEecCCCcch
Confidence 2222 3445555444 56789999999999999875543
No 87
>PRK07806 short chain dehydrogenase; Provisional
Probab=99.66 E-value=1.3e-15 Score=122.94 Aligned_cols=122 Identities=17% Similarity=0.129 Sum_probs=90.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.++++|++|||||||+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++.+.
T Consensus 1 ~~~~~~k~vlItGasggiG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~ 74 (248)
T PRK07806 1 MGDLPGKTALVTGSSRGIGADTAKILA-----GAGAHVVVNYRQKAPRANKVVAEIEAAGGRAS-AVGADLTDEESVAAL 74 (248)
T ss_pred CCCCCCcEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCchHhHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHH
Confidence 344567899999999999999999999 68999999998754210 0123567 889999999988877
Q ss_pred HHhccc---ccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
++.+.. .+|++||+++.... ++...+++|+.++.++++++...+ ..-.+++++||.
T Consensus 75 ~~~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~---~~~~~iv~isS~ 136 (248)
T PRK07806 75 MDTAREEFGGLDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLM---PAGSRVVFVTSH 136 (248)
T ss_pred HHHHHHhCCCCcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhc---cCCceEEEEeCc
Confidence 765321 27999999875322 345567899999999999998752 122477888774
No 88
>PRK06196 oxidoreductase; Provisional
Probab=99.66 E-value=2.3e-15 Score=126.26 Aligned_cols=171 Identities=15% Similarity=0.026 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
++|+++||||||+||++++++|+ +.|++|++++|++.+... ....++ ++.+|++|.+++.++++.+. .
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~-----~~G~~Vv~~~R~~~~~~~~~~~l~~v~-~~~~Dl~d~~~v~~~~~~~~~~~~ 98 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALA-----QAGAHVIVPARRPDVAREALAGIDGVE-VVMLDLADLESVRAFAERFLDSGR 98 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhhhCe-EEEccCCCHHHHHHHHHHHHhcCC
Confidence 46899999999999999999999 689999999998653210 113478 99999999998887776542 1
Q ss_pred ccceEEeecccCC-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 82 EITNLFWVPLQVQ-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 82 ~~~~v~~~a~~~~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
.+|++||+|+... ..+...+.+|+.++..+++.+...+... +..+|+++||...+..+.. .
T Consensus 99 ~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-~~~~iV~vSS~~~~~~~~~-----------~ 166 (315)
T PRK06196 99 RIDILINNAGVMACPETRVGDGWEAQFATNHLGHFALVNLLWPALAAG-AGARVVALSSAGHRRSPIR-----------W 166 (315)
T ss_pred CCCEEEECCCCCCCCCccCCccHHHHHHHhhHHHHHHHHHHHHHHHhc-CCCeEEEECCHHhccCCCC-----------c
Confidence 3899999998632 2345678899988666666554321101 2357888887543321110 0
Q ss_pred CCCcCCCCCCCCCCcchhHHHH--------Hhh--cCCCceEEEecCCceEecC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDV--------SAS--YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~--------l~~--~~~~~~~~i~Rp~~i~G~~ 198 (211)
.......+. .+...|...|. +.. ...++.++++||+.+.++-
T Consensus 167 ~~~~~~~~~--~~~~~Y~~SK~a~~~~~~~la~~~~~~gi~v~~v~PG~v~t~~ 218 (315)
T PRK06196 167 DDPHFTRGY--DKWLAYGQSKTANALFAVHLDKLGKDQGVRAFSVHPGGILTPL 218 (315)
T ss_pred cccCccCCC--ChHHHHHHHHHHHHHHHHHHHHHhcCCCcEEEEeeCCcccCCc
Confidence 000001111 11222332222 111 3468999999999998874
No 89
>PRK06523 short chain dehydrogenase; Provisional
Probab=99.65 E-value=5.4e-15 Score=120.26 Aligned_cols=163 Identities=16% Similarity=0.067 Sum_probs=109.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
...+.+|++|||||||+||++++++|. +.|++|++++|++... ....+. ++.+|++|++++.+.++.+..
T Consensus 4 ~~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 75 (260)
T PRK06523 4 FLELAGKRALVTGGTKGIGAATVARLL-----EAGARVVTTARSRPDD--LPEGVE-FVAADLTTAEGCAAVARAVLERL 75 (260)
T ss_pred CcCCCCCEEEEECCCCchhHHHHHHHH-----HCCCEEEEEeCChhhh--cCCcee-EEecCCCCHHHHHHHHHHHHHHc
Confidence 334557899999999999999999999 6899999999976543 234678 899999999887766654321
Q ss_pred -ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 82 -EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 82 -~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
.+|++||+++... .++...+++|+.++.++.+++...+... +..+++++||...+..
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~isS~~~~~~---------- 144 (260)
T PRK06523 76 GGVDILVHVLGGSSAPAGGFAALTDEEWQDELNLNLLAAVRLDRALLPGMIAR-GSGVIIHVTSIQRRLP---------- 144 (260)
T ss_pred CCCCEEEECCcccccCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCcEEEEEecccccCC----------
Confidence 2899999998421 1355677899998877766654432101 2356888877543321
Q ss_pred CCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ ....|.. .+.+.+. ...++.+.+++|+.+..+.
T Consensus 145 -------~~~------~~~~Y~~sK~a~~~l~~~~a~~~~~~gi~v~~i~Pg~v~t~~ 189 (260)
T PRK06523 145 -------LPE------STTAYAAAKAALSTYSKSLSKEVAPKGVRVNTVSPGWIETEA 189 (260)
T ss_pred -------CCC------CcchhHHHHHHHHHHHHHHHHHHhhcCcEEEEEecCcccCcc
Confidence 000 0111221 2222222 2468999999999998864
No 90
>PRK07067 sorbitol dehydrogenase; Provisional
Probab=99.65 E-value=3e-15 Score=121.64 Aligned_cols=166 Identities=13% Similarity=0.020 Sum_probs=109.9
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..+.|++|||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|++++.++++.+..
T Consensus 3 ~l~~~~vlItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 76 (257)
T PRK07067 3 RLQGKVALLTGAASGIGEAVAERYL-----AEGARVVIADIKPARARLAALEIGPAAI-AVSLDVTRQDSIDRIVAAAVE 76 (257)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999765311 1124577 899999999988887775421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee-eecccCCccccC
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH-YMGPIFDPSLAG 148 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~-y~~~~~~~~~~g 148 (211)
.+|.+||+++... .++...+++|+.++.++++++...+.....-.+|+++||... ++.
T Consensus 77 ~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~--------- 147 (257)
T PRK07067 77 RFGGIDILFNNAALFDMAPILDISRDSYDRLFAVNVKGLFFLMQAVARHMVEQGRGGKIINMASQAGRRGE--------- 147 (257)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhhhHHHHHHHHHHHHHhcCCCcEEEEeCCHHhCCCC---------
Confidence 3899999987532 134556789999999999988654200011146777776321 110
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. ... .........+.+.+. ...+++++.+||+.++++.
T Consensus 148 ---------~-~~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~v~t~~ 190 (257)
T PRK07067 148 ---------A-LVS--HYCATKAAVISYTQSAALALIRHGINVNAIAPGVVDTPM 190 (257)
T ss_pred ---------C-CCc--hhhhhHHHHHHHHHHHHHHhcccCeEEEEEeeCcccchh
Confidence 0 000 000111222222211 3578999999999999974
No 91
>PRK07060 short chain dehydrogenase; Provisional
Probab=99.64 E-value=2.2e-15 Score=121.20 Aligned_cols=169 Identities=12% Similarity=0.031 Sum_probs=112.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|.++.+++++||||+|+||+++++.|+ ++|++|++++|++++.. . ...+.+ ++.+|++|.+.+.+.++....
T Consensus 4 ~~~~~~~~~lItGa~g~iG~~~a~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~ 77 (245)
T PRK07060 4 AFDFSGKSVLVTGASSGIGRACAVALA-----QRGARVVAAARNAAALDRLAGETGCE-PLRLDVGDDAAIRAALAAAGA 77 (245)
T ss_pred ccccCCCEEEEeCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCe-EEEecCCCHHHHHHHHHHhCC
Confidence 334456899999999999999999999 68999999999764321 0 112467 889999999988888876544
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMP 152 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~ 152 (211)
+|+|||+++.... ++.+.+.+|+.++.++++++.+.+.......+|+++||...|...
T Consensus 78 -~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~iv~~sS~~~~~~~------------ 144 (245)
T PRK07060 78 -FDGLVNCAGIASLESALDMTAEGFDRVMAVNARGAALVARHVARAMIAAGRGGSIVNVSSQAALVGL------------ 144 (245)
T ss_pred -CCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCcEEEEEccHHHcCCC------------
Confidence 8999999976321 344556789999999988886542101112578888875443210
Q ss_pred CCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 153 YEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 153 ~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.... .........+.+.+. ...+++++.+||+.++++..
T Consensus 145 -----~~~~---~y~~sK~a~~~~~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 188 (245)
T PRK07060 145 -----PDHL---AYCASKAALDAITRVLCVELGPHGIRVNSVNPTVTLTPMA 188 (245)
T ss_pred -----CCCc---HhHHHHHHHHHHHHHHHHHHhhhCeEEEEEeeCCCCCchh
Confidence 0000 000111222222222 23589999999999998753
No 92
>PRK12828 short chain dehydrogenase; Provisional
Probab=99.64 E-value=6.3e-15 Score=117.87 Aligned_cols=164 Identities=13% Similarity=0.048 Sum_probs=109.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
.+|++|||||||+||++++++|+ ++|++|++++|++.+. ......++ ++.+|++|.+++.+.++.+..
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 79 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLA-----ARGARVALIGRGAAPLSQTLPGVPADALR-IGGIDLVDPQAARRAVDEVNRQ 79 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHH-----HCCCeEEEEeCChHhHHHHHHHHhhcCce-EEEeecCCHHHHHHHHHHHHHH
Confidence 46899999999999999999999 6899999999976531 11234567 889999999988877765421
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|.|+|+++.... .+.+.+.+|..++.++++++.+.+. ..+.++|+++||...|+..
T Consensus 80 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~~---------- 148 (239)
T PRK12828 80 FGRLDALVNIAGAFVWGTIADGDADTWDRMYGVNVKTTLNASKAALPALT-ASGGGRIVNIGAGAALKAG---------- 148 (239)
T ss_pred hCCcCEEEECCcccCcCChhhCCHHHHHHHHHhhchhHHHHHHHHHHHHH-hcCCCEEEEECchHhccCC----------
Confidence 27999999875321 2344577899998888887754211 1146788988886555311
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.... .........+.++.. ...++++.++||+.++++.
T Consensus 149 --------~~~~--~y~~sk~a~~~~~~~~a~~~~~~~i~~~~i~pg~v~~~~ 191 (239)
T PRK12828 149 --------PGMG--AYAAAKAGVARLTEALAAELLDRGITVNAVLPSIIDTPP 191 (239)
T ss_pred --------CCcc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCcccCcc
Confidence 0000 000011111222221 2468999999999999874
No 93
>PRK12746 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5.5e-15 Score=119.71 Aligned_cols=163 Identities=12% Similarity=-0.051 Sum_probs=107.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++++++||||||+||++++++|+ ++|++|+++ .|+..+.. . ....++ ++.+|++|++++.++++.
T Consensus 4 ~~~~~ilItGasg~iG~~la~~l~-----~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~ 77 (254)
T PRK12746 4 LDGKVALVTGASRGIGRAIAMRLA-----NDGALVAIHYGRNKQAADETIREIESNGGKAF-LIEADLNSIDGVKKLVEQ 77 (254)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEE-EEEcCcCCHHHHHHHHHH
Confidence 445899999999999999999999 689998775 45543210 0 124577 889999999998887775
Q ss_pred cc---------cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecc
Q 028258 79 IS---------QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGP 140 (211)
Q Consensus 79 ~~---------~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~ 140 (211)
+. ..+|++||+++.... .+...+++|+.++.++++++.+.+ ....+++++||...+...
T Consensus 78 ~~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~~~~v~~sS~~~~~~~ 154 (254)
T PRK12746 78 LKNELQIRVGTSEIDILVNNAGIGTQGTIENTTEEIFDEIMAVNIKAPFFLIQQTLPLL---RAEGRVINISSAEVRLGF 154 (254)
T ss_pred HHHHhccccCCCCccEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHh---hcCCEEEEECCHHhcCCC
Confidence 42 128999999986322 124456799999999999887642 122477888775544210
Q ss_pred cCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 141 IFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 141 ~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
....+ ......+.+.+... ...++++++++|+.+.++-
T Consensus 155 -----------------~~~~~---Y~~sK~a~~~~~~~~~~~~~~~~i~v~~v~pg~~~t~~ 197 (254)
T PRK12746 155 -----------------TGSIA---YGLSKGALNTMTLPLAKHLGERGITVNTIMPGYTKTDI 197 (254)
T ss_pred -----------------CCCcc---hHhhHHHHHHHHHHHHHHHhhcCcEEEEEEECCccCcc
Confidence 00000 01111222222221 2468999999999998764
No 94
>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]
Probab=99.64 E-value=9.2e-15 Score=116.02 Aligned_cols=125 Identities=21% Similarity=0.098 Sum_probs=94.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|.....|.++|||||++||.+++++|. +.|++|++..|+.++.. .....+. .+..|++|++++..+++.
T Consensus 1 m~~~~~kv~lITGASSGiG~A~A~~l~-----~~G~~vvl~aRR~drL~~la~~~~~~~~~-~~~~DVtD~~~~~~~i~~ 74 (246)
T COG4221 1 MTTLKGKVALITGASSGIGEATARALA-----EAGAKVVLAARREERLEALADEIGAGAAL-ALALDVTDRAAVEAAIEA 74 (246)
T ss_pred CCCCCCcEEEEecCcchHHHHHHHHHH-----HCCCeEEEEeccHHHHHHHHHhhccCceE-EEeeccCCHHHHHHHHHH
Confidence 344456899999999999999999999 79999999999987521 1124577 889999999987776654
Q ss_pred ccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.+ .+|.+||.||... .+|..++++|+.|+.+..+++...|... +-.+++.+||..
T Consensus 75 ~~~~~g~iDiLvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r-~~G~IiN~~SiA 142 (246)
T COG4221 75 LPEEFGRIDILVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVER-KSGHIINLGSIA 142 (246)
T ss_pred HHHhhCcccEEEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhc-CCceEEEecccc
Confidence 432 3999999998743 2678889999999888888776654111 223777777743
No 95
>PRK06500 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5e-15 Score=119.46 Aligned_cols=165 Identities=15% Similarity=0.037 Sum_probs=107.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+.+++|+++||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|++|.+++...++.+
T Consensus 1 m~~~~~k~vlItGasg~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (249)
T PRK06500 1 MSRLQGKTALITGGTSGIGLETARQFL-----AEGARVAITGRDPASLEAARAELGESAL-VIRADAGDVAAQKALAQAL 74 (249)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHhCCceE-EEEecCCCHHHHHHHHHHH
Confidence 344567899999999999999999999 68999999998754211 0124577 8899999998776665543
Q ss_pred c---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec-CeeeecccCCccc
Q 028258 80 S---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG-TKHYMGPIFDPSL 146 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~-~~~y~~~~~~~~~ 146 (211)
. ..+|++||+++... ..+...+++|+.++.++++++...+. ...++++.+| ...|+.+
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~~i~~~S~~~~~~~~------ 145 (249)
T PRK06500 75 AEAFGRLDAVFINAGVAKFAPLEDWDEAMFDRSFNTNVKGPYFLIQALLPLLA---NPASIVLNGSINAHIGMP------ 145 (249)
T ss_pred HHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHh---cCCEEEEEechHhccCCC------
Confidence 2 13899999997632 13445789999999999999976421 1134555544 3333211
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
...+ ....+...+.+... ...++++.++||+.++++.
T Consensus 146 ------------~~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~i~pg~~~t~~ 187 (249)
T PRK06500 146 ------------NSSV---YAASKAALLSLAKTLSGELLPRGIRVNAVSPGPVQTPL 187 (249)
T ss_pred ------------CccH---HHHHHHHHHHHHHHHHHHhhhcCeEEEEEeeCcCCCHH
Confidence 0000 00011122222221 3468999999999999873
No 96
>PRK05876 short chain dehydrogenase; Provisional
Probab=99.64 E-value=5e-15 Score=122.00 Aligned_cols=128 Identities=13% Similarity=-0.023 Sum_probs=91.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|..+++|++|||||+|+||++++++|+ +.|++|++++|+.+... . ....+. ++.+|++|++++.+.+
T Consensus 1 ~~~~~~k~vlVTGas~gIG~ala~~La-----~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~-~~~~Dv~d~~~v~~~~ 74 (275)
T PRK05876 1 MDGFPGRGAVITGGASGIGLATGTEFA-----RRGARVVLGDVDKPGLRQAVNHLRAEGFDVH-GVMCDVRHREEVTHLA 74 (275)
T ss_pred CCCcCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHH
Confidence 334557899999999999999999999 68999999998764311 0 123467 8899999999888777
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.. .+|++||+|+... .++...+++|+.++.++++++...+.....-.+++++||...+
T Consensus 75 ~~~~~~~g~id~li~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~p~m~~~~~~g~iv~isS~~~~ 147 (275)
T PRK05876 75 DEAFRLLGHVDVVFSNAGIVVGGPIVEMTHDDWRWVIDVDLWGSIHTVEAFLPRLLEQGTGGHVVFTASFAGL 147 (275)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCEEEEeCChhhc
Confidence 65421 2899999998632 1345567999999988888875432001113578888875443
No 97
>PRK12829 short chain dehydrogenase; Provisional
Probab=99.64 E-value=4.1e-15 Score=120.94 Aligned_cols=167 Identities=14% Similarity=0.053 Sum_probs=108.0
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++.+++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 8 ~~~~~~vlItGa~g~iG~~~a~~L~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 81 (264)
T PRK12829 8 PLDGLRVLVTGGASGIGRAIAEAFA-----EAGARVHVCDVSEAALAATAARLPGAKVT-ATVADVADPAQVERVFDTAV 81 (264)
T ss_pred ccCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCceE-EEEccCCCHHHHHHHHHHHH
Confidence 3456899999999999999999999 68999999999754311 1112457 89999999998887776542
Q ss_pred c---ccceEEeecccC-C---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCeeeecccCCccc
Q 028258 81 Q---EITNLFWVPLQV-Q---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 81 ~---~~~~v~~~a~~~-~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~y~~~~~~~~~ 146 (211)
. .+|.|||+++.. . ..+...+++|..++.++++++...+... +. .+|+++|+...+.
T Consensus 82 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~~~~vv~~ss~~~~~-------- 152 (264)
T PRK12829 82 ERFGGLDVLVNNAGIAGPTGGIDEITPEQWEQTLAVNLNGQFYFARAAVPLLKAS-GHGGVIIALSSVAGRL-------- 152 (264)
T ss_pred HHhCCCCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCeEEEEeccccccc--------
Confidence 1 289999999864 1 1345678899999988888774321001 22 5566666532211
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+ .....+ ........+.++.. ...+++++++||+.++|+..
T Consensus 153 -~--------~~~~~~---y~~~K~a~~~~~~~l~~~~~~~~i~~~~l~pg~v~~~~~ 198 (264)
T PRK12829 153 -G--------YPGRTP---YAASKWAVVGLVKSLAIELGPLGIRVNAILPGIVRGPRM 198 (264)
T ss_pred -C--------CCCCch---hHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCCcCChHH
Confidence 0 000000 00011112222222 24689999999999998764
No 98
>PRK06398 aldose dehydrogenase; Validated
Probab=99.63 E-value=1.9e-14 Score=117.27 Aligned_cols=123 Identities=13% Similarity=0.051 Sum_probs=92.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
|..+++|++|||||+|+||++++++|+ +.|++|++++|+.... ..++ ++.+|++|++++.++++.+..
T Consensus 1 ~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~Vi~~~r~~~~~----~~~~-~~~~D~~~~~~i~~~~~~~~~~~ 70 (258)
T PRK06398 1 DLGLKDKVAIVTGGSQGIGKAVVNRLK-----EEGSNVINFDIKEPSY----NDVD-YFKVDVSNKEQVIKGIDYVISKY 70 (258)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCcccc----CceE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 334556899999999999999999999 6999999999976532 3678 899999999988877765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+++... .++...+++|+.++.++++++...+... +..+++++||...+
T Consensus 71 ~~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~~ 135 (258)
T PRK06398 71 GRIDILVNNAGIESYGAIHAVEEDEWDRIINVNVNGIFLMSKYTIPYMLKQ-DKGVIINIASVQSF 135 (258)
T ss_pred CCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCeEEEEeCcchhc
Confidence 3899999998632 1345667999999888888776432101 24678888875443
No 99
>PRK06101 short chain dehydrogenase; Provisional
Probab=99.63 E-value=6.2e-15 Score=118.81 Aligned_cols=116 Identities=18% Similarity=0.101 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
++++||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+...+|.+
T Consensus 2 ~~vlItGas~giG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~d~~ 75 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYA-----KQGWQVIACGRNQSVLDELHTQSANIF-TLAFDVTDHPGTKAALSQLPFIPELW 75 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hCCCEEEEEECCHHHHHHHHHhcCCCe-EEEeeCCCHHHHHHHHHhcccCCCEE
Confidence 789999999999999999999 68999999999765321 1124678 89999999999999988765336778
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+|+++... ..+.+.+++|+.++.++++++...+. +-.+++++||.
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~~~iv~isS~ 129 (240)
T PRK06101 76 IFNAGDCEYMDDGKVDATLMARVFNVNVLGVANCIEGIQPHLS---CGHRVVIVGSI 129 (240)
T ss_pred EEcCcccccCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh---cCCeEEEEech
Confidence 88876421 12445789999999999998876421 12456766663
No 100
>PRK07523 gluconate 5-dehydrogenase; Provisional
Probab=99.63 E-value=4.9e-15 Score=120.24 Aligned_cols=164 Identities=13% Similarity=0.056 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|++|||||+|+||++++++|+ ++|++|++++|++.+.. . ....+. ++.+|++|++++.++++.+.
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 82 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLA-----QAGAEVILNGRDPAKLAAAAESLKGQGLSAH-ALAFDVTDHDAVRAAIDAFE 82 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCceEE-EEEccCCCHHHHHHHHHHHH
Confidence 36899999999999999999999 68999999999765311 0 123477 88999999998888876643
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|++||+++.... .+...+.+|+.++.++++++.+.+... ...+++++||...+.
T Consensus 83 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~iss~~~~~---------- 151 (255)
T PRK07523 83 AEIGPIDILVNNAGMQFRTPLEDFPADAFERLLRTNISSVFYVGQAVARHMIAR-GAGKIINIASVQSAL---------- 151 (255)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHh-CCeEEEEEccchhcc----------
Confidence 1 38999999986431 234567899999999998887542101 246788887743221
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+... .. .....+...+.+.+. ...++++.++||+.+.++.
T Consensus 152 -------~~~~-~~--~y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 196 (255)
T PRK07523 152 -------ARPG-IA--PYTATKGAVGNLTKGMATDWAKHGLQCNAIAPGYFDTPL 196 (255)
T ss_pred -------CCCC-Cc--cHHHHHHHHHHHHHHHHHHhhHhCeEEEEEEECcccCch
Confidence 0000 00 000011112222221 3568999999999998875
No 101
>PRK07774 short chain dehydrogenase; Provisional
Probab=99.63 E-value=7.6e-15 Score=118.53 Aligned_cols=164 Identities=13% Similarity=-0.001 Sum_probs=110.0
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
...+.|+++||||+|+||++++++|+ +.|++|++++|++.... .....+. ++.+|++|.+++...++
T Consensus 2 ~~~~~k~vlItGasg~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 75 (250)
T PRK07774 2 GRFDDKVAIVTGAAGGIGQAYAEALA-----REGASVVVADINAEGAERVAKQIVADGGTAI-AVQVDVSDPDSAKAMAD 75 (250)
T ss_pred cccCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHH
Confidence 33456899999999999999999999 68999999999754310 0123567 88999999988877666
Q ss_pred hc----ccccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 78 LI----SQEITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 78 ~~----~~~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
.+ .. +|.|||+++... ..+.+.+++|+.++.++++++...+. ..+.++|++.||...|...
T Consensus 76 ~~~~~~~~-id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~- 152 (250)
T PRK07774 76 ATVSAFGG-IDYLVNNAAIYGGMKLDLLITVPWDYYKKFMSVNLDGALVCTRAVYKHMA-KRGGGAIVNQSSTAAWLYS- 152 (250)
T ss_pred HHHHHhCC-CCEEEECCCCcCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-HhCCcEEEEEecccccCCc-
Confidence 44 22 899999998631 12345678999999998888875420 0123578888876544210
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .......+.+.+.+. ...++.+++++|+.+..+..
T Consensus 153 -------------------~---~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 193 (250)
T PRK07774 153 -------------------N---FYGLAKVGLNGLTQQLARELGGMNIRVNAIAPGPIDTEAT 193 (250)
T ss_pred -------------------c---ccHHHHHHHHHHHHHHHHHhCccCeEEEEEecCcccCccc
Confidence 0 000111222222222 24689999999998877654
No 102
>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]
Probab=99.63 E-value=7.2e-15 Score=119.22 Aligned_cols=163 Identities=17% Similarity=0.106 Sum_probs=111.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.++++++++|||||++||.+++++|. ++|++|+.++|+.++.. . ..-.++ ++.+|+++++++.+.
T Consensus 1 ~~~~~~~~~lITGASsGIG~~~A~~lA-----~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~-vi~~DLs~~~~~~~l 74 (265)
T COG0300 1 PGPMKGKTALITGASSGIGAELAKQLA-----RRGYNLILVARREDKLEALAKELEDKTGVEVE-VIPADLSDPEALERL 74 (265)
T ss_pred CCCCCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHHHhhCceEE-EEECcCCChhHHHHH
Confidence 345667999999999999999999999 79999999999987521 1 124567 899999999887776
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
...+.. .||.+|++||.... ...+.+++|+.++..|..++...+-+. +-.+++.++|...|..
T Consensus 75 ~~~l~~~~~~IdvLVNNAG~g~~g~f~~~~~~~~~~mi~lN~~a~~~LT~~~lp~m~~~-~~G~IiNI~S~ag~~p---- 149 (265)
T COG0300 75 EDELKERGGPIDVLVNNAGFGTFGPFLELSLDEEEEMIQLNILALTRLTKAVLPGMVER-GAGHIINIGSAAGLIP---- 149 (265)
T ss_pred HHHHHhcCCcccEEEECCCcCCccchhhCChHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCceEEEEechhhcCC----
Confidence 654322 38999999987431 234577999988777666665443101 2357788877554420
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHH-------HHHhh--cCCCceEEEecCCceEec
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELE-------DVSAS--YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e-------~~l~~--~~~~~~~~i~Rp~~i~G~ 197 (211)
. |....|++.+ +.|.. +..|+.++.+.|+.+.-+
T Consensus 150 -----------------~---p~~avY~ATKa~v~~fSeaL~~EL~~~gV~V~~v~PG~~~T~ 192 (265)
T COG0300 150 -----------------T---PYMAVYSATKAFVLSFSEALREELKGTGVKVTAVCPGPTRTE 192 (265)
T ss_pred -----------------C---cchHHHHHHHHHHHHHHHHHHHHhcCCCeEEEEEecCccccc
Confidence 0 1112343322 22222 568899999999887644
No 103
>PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional
Probab=99.63 E-value=1.7e-14 Score=117.72 Aligned_cols=127 Identities=10% Similarity=0.029 Sum_probs=94.7
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|.+...+++|++|||||+|+||++++++|+ ++|++|++++|++... ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~~~~~l~~k~vlItG~s~gIG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~ 72 (266)
T PRK06171 1 MQDWLNLQGKIIIVTGGSSGIGLAIVKELL-----ANGANVVNADIHGGDG--QHENYQ-FVPTDVSSAEEVNHTVAEII 72 (266)
T ss_pred CcccccCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcccc--ccCceE-EEEccCCCHHHHHHHHHHHH
Confidence 555555667999999999999999999999 6999999999877643 234678 89999999998888776642
Q ss_pred c---ccceEEeecccCC------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 81 Q---EITNLFWVPLQVQ------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. .+|++||+++... .++...+++|+.++..+++++...+... +-.+++++||...
T Consensus 73 ~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 148 (266)
T PRK06171 73 EKFGRIDGLVNNAGINIPRLLVDEKDPAGKYELNEAAFDKMFNINQKGVFLMSQAVARQMVKQ-HDGVIVNMSSEAG 148 (266)
T ss_pred HHcCCCCEEEECCcccCCccccccccccccccCCHHHHHHHHhhhchhHHHHHHHHHHHHHhc-CCcEEEEEccccc
Confidence 1 3899999997521 1344567899999988888877542101 2246788877543
No 104
>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase. This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.
Probab=99.63 E-value=5.4e-15 Score=119.55 Aligned_cols=162 Identities=14% Similarity=0.050 Sum_probs=106.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS-- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-- 80 (211)
|++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++..+++.+.
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 75 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALA-----AAGANVVVNDLGEAGAEAAAKVATDAGGSVI-YLVADVTKEDEIADMIAAAAAE 75 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHHh
Confidence 689999999999999999999 68999999999764311 0124578 89999999998877665542
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
..+|+|||+++.... +....++.|..++..+++++...+. ..+.++|+++||...+.+.
T Consensus 76 ~~~~d~vi~~a~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~~~~v~~ss~~~~~~~---------- 144 (255)
T TIGR01963 76 FGGLDILVNNAGIQHVAPIEEFPPEDWDRIIAIMLTSAFHTIRAALPHMK-KQGWGRIINIASAHGLVAS---------- 144 (255)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhcCCC----------
Confidence 127999999976321 2334567898887777777643210 1145788888875443210
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHh----h-cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSA----S-YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~----~-~~~~~~~~i~Rp~~i~G~~ 198 (211)
+. ..+ ........+.+.. + ...+++++++||+.++++.
T Consensus 145 -----~~--~~~---y~~sk~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~~~~ 187 (255)
T TIGR01963 145 -----PF--KSA---YVAAKHGLIGLTKVLALEVAAHGITVNAICPGYVRTPL 187 (255)
T ss_pred -----CC--Cch---hHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCccccHH
Confidence 00 000 0011111122221 1 2358999999999999875
No 105
>PRK06194 hypothetical protein; Provisional
Probab=99.62 E-value=7.1e-15 Score=121.31 Aligned_cols=126 Identities=14% Similarity=-0.055 Sum_probs=89.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+.++++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|.+++.++++.
T Consensus 3 ~~~~k~vlVtGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~ 76 (287)
T PRK06194 3 DFAGKVAVITGAASGFGLAFARIGA-----ALGMKLVLADVQQDALDRAVAELRAQGAEVL-GVRTDVSDAAQVEALADA 76 (287)
T ss_pred CCCCCEEEEeCCccHHHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3445899999999999999999999 68999999998754311 0123567 799999999988887775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCC-----ceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSR-----LRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-----~~~~~~~s~~~~y 137 (211)
+.. .+|.|||+|+.... ++...+++|+.++.++++++...+..... ..+++++||...|
T Consensus 77 ~~~~~g~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~ 152 (287)
T PRK06194 77 ALERFGAVHLLFNNAGVGAGGLVWENSLADWEWVLGVNLWGVIHGVRAFTPLMLAAAEKDPAYEGHIVNTASMAGL 152 (287)
T ss_pred HHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhccHHHHHHHHHHHHHHHhcCCCCCCCCeEEEEeCChhhc
Confidence 421 27999999987431 33456789999988877774332100111 2478888876544
No 106
>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.62 E-value=1.1e-14 Score=117.06 Aligned_cols=124 Identities=18% Similarity=-0.026 Sum_probs=89.8
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++.+++++||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|+++++++.++++.
T Consensus 4 ~~~~~~vlVtG~sg~iG~~l~~~L~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 77 (239)
T PRK07666 4 SLQGKNALITGAGRGIGRAVAIALA-----KEGVNVGLLARTEENLKAVAEEVEAYGVKVV-IATADVSDYEEVTAAIEQ 77 (239)
T ss_pred cCCCCEEEEEcCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3446889999999999999999999 68999999999764310 0124677 899999999988887765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
+.. .+|.|||+++.... ++...+++|+.++.++.+++...+. ..+..+++++|+...
T Consensus 78 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~~ 146 (239)
T PRK07666 78 LKNELGSIDILINNAGISKFGKFLELDPAEWEKIIQVNLMGVYYATRAVLPSMI-ERQSGDIINISSTAG 146 (239)
T ss_pred HHHHcCCccEEEEcCccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hCCCcEEEEEcchhh
Confidence 421 28999999876321 2345678999998888887764310 113467787777443
No 107
>PRK07890 short chain dehydrogenase; Provisional
Probab=99.62 E-value=5.8e-15 Score=119.78 Aligned_cols=164 Identities=15% Similarity=-0.006 Sum_probs=110.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||||+||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++...++.+.
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAA-----RAGADVVLAARTAERLDEVAAEIDDLGRRAL-AVPTDITDEDQCANLVALAL 77 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEecCCCCHHHHHHHHHHHH
Confidence 45889999999999999999999 79999999999764311 0 124578 89999999998877776541
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|++||+++... .++...+++|+.++..+++++...+.+. ..+|+++||...+..
T Consensus 78 ~~~g~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~--~~~ii~~sS~~~~~~-------- 147 (258)
T PRK07890 78 ERFGRVDALVNNAFRVPSMKPLADADFAHWRAVIELNVLGTLRLTQAFTPALAES--GGSIVMINSMVLRHS-------- 147 (258)
T ss_pred HHcCCccEEEECCccCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC--CCEEEEEechhhccC--------
Confidence 12899999997532 1345567899999999999887542111 147888877533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
... .+ .........+.+.+. ...++++..+||+.++++..
T Consensus 148 ---------~~~-~~--~Y~~sK~a~~~l~~~~a~~~~~~~i~v~~v~pg~v~~~~~ 192 (258)
T PRK07890 148 ---------QPK-YG--AYKMAKGALLAASQSLATELGPQGIRVNSVAPGYIWGDPL 192 (258)
T ss_pred ---------CCC-cc--hhHHHHHHHHHHHHHHHHHHhhcCcEEEEEeCCccCcHHH
Confidence 000 00 001111222222222 24689999999999999854
No 108
>PRK07024 short chain dehydrogenase; Provisional
Probab=99.62 E-value=4.7e-15 Score=120.64 Aligned_cols=160 Identities=12% Similarity=-0.042 Sum_probs=106.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|+++++||||||+||++++++|+ +.|++|++++|++.... . ...++. ++.+|++|++++.+.++.+..
T Consensus 1 ~~~~vlItGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~ 74 (257)
T PRK07024 1 MPLKVFITGASSGIGQALAREYA-----RQGATLGLVARRTDALQAFAARLPKAARVS-VYAADVRDADALAAAAADFIA 74 (257)
T ss_pred CCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhcccCCeeE-EEEcCCCCHHHHHHHHHHHHH
Confidence 34789999999999999999999 68999999999764311 1 112678 899999999988877765421
Q ss_pred ---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 82 ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 82 ---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
.+|++||+++... ..+...+++|+.++.++++++...+... +..+|+.+||...+.+
T Consensus 75 ~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~l~~~~~~-~~~~iv~isS~~~~~~--------- 144 (257)
T PRK07024 75 AHGLPDVVIANAGISVGTLTEEREDLAVFREVMDTNYFGMVATFQPFIAPMRAA-RRGTLVGIASVAGVRG--------- 144 (257)
T ss_pred hCCCCCEEEECCCcCCCccccccCCHHHHHHHHhHhcHHHHHHHHHHHHHHHhc-CCCEEEEEechhhcCC---------
Confidence 2799999987532 1244567899999888777544321101 3357787776433211
Q ss_pred CCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.. ....| ...+.+... +..+++++++||+.+.++.
T Consensus 145 --------~~-------~~~~Y~asK~a~~~~~~~l~~e~~~~gi~v~~v~Pg~v~t~~ 188 (257)
T PRK07024 145 --------LP-------GAGAYSASKAAAIKYLESLRVELRPAGVRVVTIAPGYIRTPM 188 (257)
T ss_pred --------CC-------CCcchHHHHHHHHHHHHHHHHHhhccCcEEEEEecCCCcCch
Confidence 00 00112 122222211 3578999999999998874
No 109
>PRK08628 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.3e-14 Score=117.80 Aligned_cols=163 Identities=9% Similarity=0.007 Sum_probs=109.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
++|++|||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|+++++++...++++..
T Consensus 6 ~~~~ilItGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 79 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLA-----EEGAIPVIFGRSAPDDEFAEELRALQPRAE-FVQVDLTDDAQCRDAVEQTVA 79 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HcCCcEEEEcCChhhHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998765421 0134678 999999999988887765421
Q ss_pred ---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 82 ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 82 ---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
.+|.|||+++... .++...+++|+.++.++.+.+.+.+. ....+|+++||...+.+.
T Consensus 80 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~iv~~ss~~~~~~~---------- 147 (258)
T PRK08628 80 KFGRIDGLVNNAGVNDGVGLEAGREAFVASLERNLIHYYVMAHYCLPHLK--ASRGAIVNISSKTALTGQ---------- 147 (258)
T ss_pred hcCCCCEEEECCcccCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhh--ccCcEEEEECCHHhccCC----------
Confidence 2899999998532 13445678899888888887764321 123578888774332110
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
. ... .....+...+.+.+. ..+++.+..+||+.++++.
T Consensus 148 ----~----~~~--~Y~~sK~a~~~~~~~l~~e~~~~~i~v~~v~pg~v~t~~ 190 (258)
T PRK08628 148 ----G----GTS--GYAAAKGAQLALTREWAVALAKDGVRVNAVIPAEVMTPL 190 (258)
T ss_pred ----C----CCc--hhHHHHHHHHHHHHHHHHHHhhcCeEEEEEecCccCCHH
Confidence 0 000 000111122222222 3568999999999999874
No 110
>PRK07856 short chain dehydrogenase; Provisional
Probab=99.62 E-value=2.4e-14 Score=116.07 Aligned_cols=123 Identities=16% Similarity=0.069 Sum_probs=91.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++++|++|||||+|+||++++++|+ +.|++|++++|++... .....++ ++.+|++|++++.+.++.+.. .
T Consensus 3 ~~~~k~~lItGas~gIG~~la~~l~-----~~g~~v~~~~r~~~~~-~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 75 (252)
T PRK07856 3 DLTGRVVLVTGGTRGIGAGIARAFL-----AAGATVVVCGRRAPET-VDGRPAE-FHAADVRDPDQVAALVDAIVERHGR 75 (252)
T ss_pred CCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCChhhh-hcCCceE-EEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3457999999999999999999999 6899999999976531 1235678 899999999988887766521 2
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|++||+++... ..+...+++|+.++.++++++...+....+..+|+++||..
T Consensus 76 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~ 137 (252)
T PRK07856 76 LDVLVNNAGGSPYALAAEASPRFHEKIVELNLLAPLLVAQAANAVMQQQPGGGSIVNIGSVS 137 (252)
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEcccc
Confidence 799999997532 13456779999999999988765321011235778887753
No 111
>TIGR03443 alpha_am_amid L-aminoadipate-semialdehyde dehydrogenase. Members of this protein family are L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31), product of the LYS2 gene. It is also called alpha-aminoadipate reductase. In fungi, lysine is synthesized via aminoadipate. Currently, all members of this family are fungal.
Probab=99.62 E-value=9.5e-15 Score=143.37 Aligned_cols=179 Identities=12% Similarity=0.037 Sum_probs=114.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------------C--CCCCceeEEEeeCCCH--
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------------F--PTALVDRYITFDALDP-- 69 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------------~--~~~~~~~~i~~Dl~d~-- 69 (211)
.++|||||||||+|++++++|++... ...++|+++.|...... . ...+++ ++.+|++++
T Consensus 971 ~~~VlvTGatGflG~~l~~~Ll~~~~-~~~~~V~~l~R~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~-~~~gDl~~~~l 1048 (1389)
T TIGR03443 971 PITVFLTGATGFLGSFILRDLLTRRS-NSNFKVFAHVRAKSEEAGLERLRKTGTTYGIWDEEWASRIE-VVLGDLSKEKF 1048 (1389)
T ss_pred CceEEEeCCccccHHHHHHHHHhcCC-CCCcEEEEEECcCChHHHHHHHHHHHHHhCCCchhhhcceE-EEeccCCCccC
Confidence 57899999999999999999994100 12388999999754210 0 013688 999999865
Q ss_pred ----HHHHHHHHhcccccceEEeecccCCc--hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 70 ----TDTALKLSLISQEITNLFWVPLQVQE--SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 70 ----~~~~~~~~~~~~~~~~v~~~a~~~~~--~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
+.+.+...+ +|+|||+|+.... ........|+.++.++++++... ++++|+++||..+|+....
T Consensus 1049 gl~~~~~~~l~~~----~d~iiH~Aa~~~~~~~~~~~~~~nv~gt~~ll~~a~~~-----~~~~~v~vSS~~v~~~~~~- 1118 (1389)
T TIGR03443 1049 GLSDEKWSDLTNE----VDVIIHNGALVHWVYPYSKLRDANVIGTINVLNLCAEG-----KAKQFSFVSSTSALDTEYY- 1118 (1389)
T ss_pred CcCHHHHHHHHhc----CCEEEECCcEecCccCHHHHHHhHHHHHHHHHHHHHhC-----CCceEEEEeCeeecCcccc-
Confidence 334443332 7899999987542 33344467999999999999875 5789999999999863210
Q ss_pred ccccCCC--CCCCCCCcCCCCCCC---CCCcchhHHHHHhh------cCCCceEEEecCCceEecCCC
Q 028258 144 PSLAGQL--MPYEVPFKEDSSRLP---FPNFYYELEDVSAS------YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 144 ~~~~g~~--~~~~~~~~e~~~~~~---~~~~~~~~e~~l~~------~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
...... ......+.|+.+... .+..-|...|+..+ ...+++++++||+.|||++..
T Consensus 1119 -~~~~~~~~~~~~~~~~e~~~~~~~~~~~~~~Y~~sK~~aE~l~~~~~~~g~~~~i~Rpg~v~G~~~~ 1185 (1389)
T TIGR03443 1119 -VNLSDELVQAGGAGIPESDDLMGSSKGLGTGYGQSKWVAEYIIREAGKRGLRGCIVRPGYVTGDSKT 1185 (1389)
T ss_pred -cchhhhhhhccCCCCCcccccccccccCCCChHHHHHHHHHHHHHHHhCCCCEEEECCCccccCCCc
Confidence 000000 000112333322111 11223444444433 346899999999999998653
No 112
>PRK06138 short chain dehydrogenase; Provisional
Probab=99.62 E-value=1.2e-14 Score=117.34 Aligned_cols=164 Identities=9% Similarity=-0.070 Sum_probs=107.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
++|+++||||+|+||++++++|+ ++|++|+++.|+.+... .....+. ++.+|++|++++.++++.+.
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~ 77 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFA-----REGARVVVADRDAEAAERVAAAIAAGGRAF-ARQGDVGSAEAVEALVDFVAA 77 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHH-----HCCCeEEEecCCHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765311 0124577 89999999998888776542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee-ecccCCccccC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY-MGPIFDPSLAG 148 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y-~~~~~~~~~~g 148 (211)
..+|.|||+++.... .+...+.+|+.++.++.+.+...+. ..+..+|+++||...+ +.+
T Consensus 78 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~ii~~sS~~~~~~~~-------- 148 (252)
T PRK06138 78 RWGRLDVLVNNAGFGCGGTVVTTDEADWDAVMRVNVGGVFLWAKYAIPIMQ-RQGGGSIVNTASQLALAGGR-------- 148 (252)
T ss_pred HcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHHHH-hcCCeEEEEECChhhccCCC--------
Confidence 128999999986321 2344578899888776666543210 0135688888775322 210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. .+ .........+.+... ...+++++++||+.++++..
T Consensus 149 ----------~-~~--~Y~~sK~a~~~~~~~l~~~~~~~~i~v~~v~pg~~~t~~~ 191 (252)
T PRK06138 149 ----------G-RA--AYVASKGAIASLTRAMALDHATDGIRVNAVAPGTIDTPYF 191 (252)
T ss_pred ----------C-cc--HHHHHHHHHHHHHHHHHHHHHhcCeEEEEEEECCccCcch
Confidence 0 00 000111112222221 24589999999999988754
No 113
>PRK07326 short chain dehydrogenase; Provisional
Probab=99.62 E-value=7e-15 Score=117.85 Aligned_cols=124 Identities=19% Similarity=0.033 Sum_probs=90.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|+.+++++++||||||+||++++++|+ +.|++|++++|++.+.. . ....++ ++.+|++|.+++.+.++
T Consensus 1 m~~~~~~~ilItGatg~iG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~ 74 (237)
T PRK07326 1 MMSLKGKVALITGGSKGIGFAIAEALL-----AEGYKVAITARDQKELEEAAAELNNKGNVL-GLAADVRDEADVQRAVD 74 (237)
T ss_pred CCCCCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEeeCCHHHHHHHHHHHhccCcEE-EEEccCCCHHHHHHHHH
Confidence 344557899999999999999999999 68999999999765311 0 115678 89999999998888776
Q ss_pred hccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|.|||+++.... .+.+.+++|+.++.++++++...+ ..+..+++++|+..
T Consensus 75 ~~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~--~~~~~~iv~~ss~~ 142 (237)
T PRK07326 75 AIVAAFGGLDVLIANAGVGHFAPVEELTPEEWRLVIDTNLTGAFYTIKAAVPAL--KRGGGYIINISSLA 142 (237)
T ss_pred HHHHHcCCCCEEEECCCCCCCCchhhCCHHHHHHHHhhccHHHHHHHHHHHHHH--HHCCeEEEEECChh
Confidence 5421 28999999876321 234567889999888888776431 01235788887743
No 114
>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional
Probab=99.62 E-value=1e-14 Score=118.62 Aligned_cols=162 Identities=10% Similarity=-0.082 Sum_probs=103.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+.
T Consensus 6 ~~~k~vlVtGas~gIG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 79 (260)
T PRK12823 6 FAGKVVVVTGAAQGIGRGVALRAA-----AEGARVVLVDRSELVHEVAAELRAAGGEAL-ALTADLETYAGAQAAMAAAV 79 (260)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCchHHHHHHHHHHhcCCeEE-EEEEeCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999743110 0124567 88999999988777766542
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
..+|++||+|+... .++...+++|+.++..+++.+...+... +..+|+++||...|+.+
T Consensus 80 ~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~~sS~~~~~~~------- 151 (260)
T PRK12823 80 EAFGRIDVLINNVGGTIWAKPFEEYEEEQIEAEIRRSLFPTLWCCRAVLPHMLAQ-GGGAIVNVSSIATRGIN------- 151 (260)
T ss_pred HHcCCCeEEEECCccccCCCChhhCChHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCeEEEEcCccccCCC-------
Confidence 12899999997421 1234556788877665555444321001 23578888886544210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEec
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~ 197 (211)
..+ ....+.+.+.+.+. ...++++..++|+.++++
T Consensus 152 ------------~~~---Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~Pg~v~t~ 191 (260)
T PRK12823 152 ------------RVP---YSAAKGGVNALTASLAFEYAEHGIRVNAVAPGGTEAP 191 (260)
T ss_pred ------------CCc---cHHHHHHHHHHHHHHHHHhcccCcEEEEEecCccCCc
Confidence 000 01111122222211 346899999999999986
No 115
>PRK05717 oxidoreductase; Validated
Probab=99.61 E-value=1.5e-14 Score=117.39 Aligned_cols=122 Identities=17% Similarity=0.088 Sum_probs=89.1
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..++|+++||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.++++.+..
T Consensus 7 ~~~~k~vlItG~sg~IG~~~a~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 80 (255)
T PRK05717 7 GHNGRVALVTGAARGIGLGIAAWLI-----AEGWQVVLADLDRERGSKVAKALGENAW-FIAMDVADEAQVAAGVAEVLG 80 (255)
T ss_pred ccCCCEEEEeCCcchHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHcCCceE-EEEccCCCHHHHHHHHHHHHH
Confidence 4456899999999999999999999 68999999988754211 1124577 899999999887666554321
Q ss_pred ---ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 ---EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+++.... ++...+++|+.++.++++++...+. ....+++++||..
T Consensus 81 ~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~g~ii~~sS~~ 146 (255)
T PRK05717 81 QFGRLDALVCNAAIADPHNTTLESLSLAHWNRVLAVNLTGPMLLAKHCAPYLR--AHNGAIVNLASTR 146 (255)
T ss_pred HhCCCCEEEECCCcccCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH--HcCcEEEEEcchh
Confidence 28999999986421 2446779999999999999875321 0124677777643
No 116
>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated
Probab=99.61 E-value=3.1e-14 Score=115.14 Aligned_cols=164 Identities=10% Similarity=0.007 Sum_probs=109.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc---cc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ---EI 83 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~~ 83 (211)
+..|++|||||+|+||++++++|+ ++|++|++++|+.... ....++ ++.+|++|++++.+.++++.. .+
T Consensus 6 ~~~k~vlItGas~~iG~~la~~l~-----~~G~~v~~~~~~~~~~--~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~i 77 (252)
T PRK08220 6 FSGKTVWVTGAAQGIGYAVALAFV-----EAGAKVIGFDQAFLTQ--EDYPFA-TFVLDVSDAAAVAQVCQRLLAETGPL 77 (252)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecchhhh--cCCceE-EEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 346899999999999999999999 6899999999986211 235678 899999999988887765421 27
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYE 154 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~ 154 (211)
|.+||+++.... ++...+++|+.++.++++++...+... +..+|+++||.....
T Consensus 78 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~ss~~~~~---------------- 140 (252)
T PRK08220 78 DVLVNAAGILRMGATDSLSDEDWQQTFAVNAGGAFNLFRAVMPQFRRQ-RSGAIVTVGSNAAHV---------------- 140 (252)
T ss_pred CEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhC-CCCEEEEECCchhcc----------------
Confidence 999999876321 344567899999888888876432101 234677777643221
Q ss_pred CCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 155 VPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 155 ~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
+...... ....+...+.+... ...++++.+++|+.+.++..
T Consensus 141 -~~~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~~ 186 (252)
T PRK08220 141 -PRIGMAA---YGASKAALTSLAKCVGLELAPYGVRCNVVSPGSTDTDMQ 186 (252)
T ss_pred -CCCCCch---hHHHHHHHHHHHHHHHHHhhHhCeEEEEEecCcCcchhh
Confidence 0000000 00111122222211 24689999999999988753
No 117
>PRK07454 short chain dehydrogenase; Provisional
Probab=99.61 E-value=1.7e-14 Score=116.10 Aligned_cols=127 Identities=15% Similarity=0.012 Sum_probs=90.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
|...++|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....++. ++.+|++|++++..++
T Consensus 1 ~~~~~~k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~ 74 (241)
T PRK07454 1 MSLNSMPRALITGASSGIGKATALAFA-----KAGWDLALVARSQDALEALAAELRSTGVKAA-AYSIDLSNPEAIAPGI 74 (241)
T ss_pred CCCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhCCCcEE-EEEccCCCHHHHHHHH
Confidence 344456899999999999999999999 68999999999765311 0124678 8999999999887777
Q ss_pred Hhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+.. .+|.+||+++.... ++...+.+|+.++.++++.+...+. ..+..+++++||...|
T Consensus 75 ~~~~~~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~~~~ 146 (241)
T PRK07454 75 AELLEQFGCPDVLINNAGMAYTGPLLEMPLSDWQWVIQLNLTSVFQCCSAVLPGMR-ARGGGLIINVSSIAAR 146 (241)
T ss_pred HHHHHHcCCCCEEEECCCccCCCchhhCCHHHHHHHHHhccHHHHHHHHHHHHHHH-hcCCcEEEEEccHHhC
Confidence 65321 28999999986321 3445678899888787776644310 1134678888876544
No 118
>TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate.
Probab=99.60 E-value=1.4e-14 Score=116.89 Aligned_cols=164 Identities=13% Similarity=-0.024 Sum_probs=109.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++++|||||||+||++++++|+ ++|++|++++|+..... ....+++ ++.+|++|.+++.+.++.+.
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~~~~~~~~~~ 75 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFA-----EEGAKVAVFDLNREAAEKVAADIRAKGGNAQ-AFACDITDRDSVDTAVAAAE 75 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 35889999999999999999999 68999999998764311 0134678 89999999998887776542
Q ss_pred ---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 ---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
..+|++||+++... ..+...+++|+.++.++++++...+... +..+++++||...|.+..
T Consensus 76 ~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~iss~~~~~~~~------- 147 (250)
T TIGR03206 76 QALGPVDVLVNNAGWDKFGPFTKTEPPLWERLIAINLTGALHMHHAVLPGMVER-GAGRIVNIASDAARVGSS------- 147 (250)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCeEEEEECchhhccCCC-------
Confidence 12799999997532 1234567899999988888776432101 346788888865553210
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ .......+.+.+... ...+++++++||+.++++.
T Consensus 148 -----------~~~--~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pg~~~~~~ 189 (250)
T TIGR03206 148 -----------GEA--VYAACKGGLVAFSKTMAREHARHGITVNVVCPGPTDTAL 189 (250)
T ss_pred -----------CCc--hHHHHHHHHHHHHHHHHHHHhHhCcEEEEEecCcccchh
Confidence 000 000111111112111 2358999999999998874
No 119
>PRK06128 oxidoreductase; Provisional
Probab=99.60 E-value=2.2e-14 Score=119.49 Aligned_cols=163 Identities=9% Similarity=-0.063 Sum_probs=109.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ +.|++|+++.|+..... .....+. ++.+|++|++++.++++
T Consensus 53 l~~k~vlITGas~gIG~~~a~~l~-----~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~ 126 (300)
T PRK06128 53 LQGRKALITGADSGIGRATAIAFA-----REGADIALNYLPEEEQDAAEVVQLIQAEGRKAV-ALPGDLKDEAFCRQLVE 126 (300)
T ss_pred cCCCEEEEecCCCcHHHHHHHHHH-----HcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEE-EEecCCCCHHHHHHHHH
Confidence 346899999999999999999999 68999988776543210 0123567 88999999988877776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|++||+|+... .++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 127 ~~~~~~g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~---~~~~iv~~sS~~~~~~~---- 199 (300)
T PRK06128 127 RAVKELGGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLP---PGASIINTGSIQSYQPS---- 199 (300)
T ss_pred HHHHHhCCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcC---cCCEEEEECCccccCCC----
Confidence 5421 3899999998531 13556789999999999999876531 12478888886655321
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ... .....+.+.+.+... ...|+++..++|+.+.++-
T Consensus 200 -----------~---~~~--~Y~asK~a~~~~~~~la~el~~~gI~v~~v~PG~i~t~~ 242 (300)
T PRK06128 200 -----------P---TLL--DYASTKAAIVAFTKALAKQVAEKGIRVNAVAPGPVWTPL 242 (300)
T ss_pred -----------C---Cch--hHHHHHHHHHHHHHHHHHHhhhcCcEEEEEEECcCcCCC
Confidence 0 000 000111112222211 3468999999999998874
No 120
>PRK09291 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.5e-14 Score=117.30 Aligned_cols=117 Identities=14% Similarity=-0.013 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|++|||||||+||++++++|+ +.|++|+++.|++.... .....++ ++.+|++|++++..++..
T Consensus 1 m~~~vlVtGasg~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~-- 72 (257)
T PRK09291 1 MSKTILITGAGSGFGREVALRLA-----RKGHNVIAGVQIAPQVTALRAEAARRGLALR-VEKLDLTDAIDRAQAAEW-- 72 (257)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcce-EEEeeCCCHHHHHHHhcC--
Confidence 35789999999999999999999 68999999999754210 1124578 899999999988887653
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.|||+++.... .+...+++|+.++.++.+.+...+. ..+..+|+++||.
T Consensus 73 -~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~SS~ 133 (257)
T PRK09291 73 -DVDVLLNNAGIGEAGAVVDIPVELVRELFETNVFGPLELTQGFVRKMV-ARGKGKVVFTSSM 133 (257)
T ss_pred -CCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCceEEEEcCh
Confidence 28999999986421 2345677888876666554432210 1134688888874
No 121
>PRK07577 short chain dehydrogenase; Provisional
Probab=99.60 E-value=3.1e-14 Score=113.83 Aligned_cols=159 Identities=15% Similarity=0.059 Sum_probs=105.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhccc--ccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQ--EITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--~~~~ 85 (211)
..|++|||||||+||++++++|+ ++|++|+++.|++... ...+ ++.+|++|++++.+.++.+.. .+|.
T Consensus 2 ~~k~vlItG~s~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~----~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~ 71 (234)
T PRK07577 2 SSRTVLVTGATKGIGLALSLRLA-----NLGHQVIGIARSAIDD----FPGE-LFACDLADIEQTAATLAQINEIHPVDA 71 (234)
T ss_pred CCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEEeCCcccc----cCce-EEEeeCCCHHHHHHHHHHHHHhCCCcE
Confidence 35789999999999999999999 6899999999986642 1236 889999999887776654311 2799
Q ss_pred EEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 86 LFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 86 v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
+||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||...|+.+.
T Consensus 72 vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~~~~~--------------- 135 (234)
T PRK07577 72 IVNNVGIALPQPLGKIDLAALQDVYDLNVRAAVQVTQAFLEGMK-LREQGRIVNICSRAIFGALD--------------- 135 (234)
T ss_pred EEECCCCCCCCChHHCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccccccCCCC---------------
Confidence 9999986432 2344678888887777666654211 01346888888865543210
Q ss_pred CcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 157 FKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
..+ ........+.+.+. ...++.++++||+.+..+.
T Consensus 136 ---~~~---Y~~sK~a~~~~~~~~a~e~~~~gi~v~~i~pg~~~t~~ 176 (234)
T PRK07577 136 ---RTS---YSAAKSALVGCTRTWALELAEYGITVNAVAPGPIETEL 176 (234)
T ss_pred ---chH---HHHHHHHHHHHHHHHHHHHHhhCcEEEEEecCcccCcc
Confidence 000 00011112222221 3468999999999988764
No 122
>PRK05875 short chain dehydrogenase; Provisional
Probab=99.60 E-value=1.2e-14 Score=119.33 Aligned_cols=124 Identities=13% Similarity=0.012 Sum_probs=88.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------C-CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------F-PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~-~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|++|||||+|+||++++++|+ ++|++|++++|++.... . ...++. ++.+|++|++++.+.++
T Consensus 5 ~~~k~vlItGasg~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 78 (276)
T PRK05875 5 FQDRTYLVTGGGSGIGKGVAAGLV-----AAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVR-YEPADVTDEDQVARAVD 78 (276)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhccCCCceE-EEEcCCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999998754311 0 024577 88999999998877776
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+.. .+|++||+++... .++...+++|+.++.++++++.+.+... +-.+|+++||...+
T Consensus 79 ~~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~~sS~~~~ 150 (276)
T PRK05875 79 AATAWHGRLHGVVHCAGGSETIGPITQIDSDAWRRTVDLNVNGTMYVLKHAARELVRG-GGGSFVGISSIAAS 150 (276)
T ss_pred HHHHHcCCCCEEEECCCcccCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEechhhc
Confidence 5411 2799999997431 1244567889999988888765542000 12478888775443
No 123
>PRK08643 acetoin reductase; Validated
Probab=99.60 E-value=3e-14 Score=115.64 Aligned_cols=122 Identities=11% Similarity=-0.040 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.+.++.+.
T Consensus 1 ~~k~~lItGas~giG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 74 (256)
T PRK08643 1 MSKVALVTGAGQGIGFAIAKRLV-----EDGFKVAIVDYNEETAQAAADKLSKDGGKAI-AVKADVSDRDQVFAAVRQVV 74 (256)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764310 0124567 88999999998887776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+++.... .+...+++|+.++..+++.+...+.....-.+++++||..
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~~ 141 (256)
T PRK08643 75 DTFGDLNVVVNNAGVAPTTPIETITEEQFDKVYNINVGGVIWGIQAAQEAFKKLGHGGKIINATSQA 141 (256)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECccc
Confidence 1 38999999976321 2345678899887777766654321011124677777643
No 124
>PRK08267 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.5e-14 Score=115.55 Aligned_cols=118 Identities=13% Similarity=-0.011 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc----
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS---- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---- 80 (211)
|++|||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|.+++.+.++.+.
T Consensus 2 k~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~ 75 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFA-----AEGWRVGAYDINEAGLAALAAELGAGNAW-TGALDVTDRAAWDAALADFAAATG 75 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHcC
Confidence 789999999999999999999 68999999999765321 1134678 99999999998888776541
Q ss_pred cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++.++++++...+... +..+++++||.
T Consensus 76 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~ 137 (260)
T PRK08267 76 GRLDVLFNNAGILRGGPFEDIPLEAHDRVIDINVKGVLNGAHAALPYLKAT-PGARVINTSSA 137 (260)
T ss_pred CCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhC-CCCEEEEeCch
Confidence 137999999986431 344567999999988888775432111 23567777664
No 125
>PRK07985 oxidoreductase; Provisional
Probab=99.59 E-value=4.7e-14 Score=117.30 Aligned_cols=159 Identities=12% Similarity=-0.082 Sum_probs=108.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+.+|++|||||+|+||++++++|+ ++|++|+++.|+..... .....+. ++.+|++|++++.+.++
T Consensus 47 ~~~k~vlITGas~gIG~aia~~L~-----~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 120 (294)
T PRK07985 47 LKDRKALVTGGDSGIGRAAAIAYA-----REGADVAISYLPVEEEDAQDVKKIIEECGRKAV-LLPGDLSDEKFARSLVH 120 (294)
T ss_pred cCCCEEEEECCCCcHHHHHHHHHH-----HCCCEEEEecCCcchhhHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHH
Confidence 445899999999999999999999 68999998776533110 0123567 88999999988877766
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCc
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDP 144 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~ 144 (211)
.+.. .+|+++|+++... .++...+++|+.++.++++++...+. .-.+|+++||...|...
T Consensus 121 ~~~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~---~~g~iv~iSS~~~~~~~---- 193 (294)
T PRK07985 121 EAHKALGGLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLP---KGASIITTSSIQAYQPS---- 193 (294)
T ss_pred HHHHHhCCCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh---cCCEEEEECCchhccCC----
Confidence 5421 3799999987521 14556789999999999988876421 12478888876554310
Q ss_pred cccCCCCCCCCCCcCCCCCCCCCCcchh----HHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 145 SLAGQLMPYEVPFKEDSSRLPFPNFYYE----LEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 145 ~~~g~~~~~~~~~~e~~~~~~~~~~~~~----~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ....|.. .+.+... ...|+++..++|+.+.++-
T Consensus 194 -----------------~---~~~~Y~asKaal~~l~~~la~el~~~gIrvn~i~PG~v~t~~ 236 (294)
T PRK07985 194 -----------------P---HLLDYAATKAAILNYSRGLAKQVAEKGIRVNIVAPGPIWTAL 236 (294)
T ss_pred -----------------C---CcchhHHHHHHHHHHHHHHHHHHhHhCcEEEEEECCcCcccc
Confidence 0 0011222 1111111 2468999999999999873
No 126
>PRK08219 short chain dehydrogenase; Provisional
Probab=99.59 E-value=2e-14 Score=114.30 Aligned_cols=120 Identities=14% Similarity=0.096 Sum_probs=84.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
|+|++|||||+|++|++++++|+ ++ ++|++++|++.... ...++++ ++.+|++|++++.++++.... +|
T Consensus 2 ~~~~vlVtG~~g~iG~~l~~~l~-----~~-~~V~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~-id 73 (227)
T PRK08219 2 ERPTALITGASRGIGAAIARELA-----PT-HTLLLGGRPAERLDELAAELPGAT-PFPVDLTDPEAIAAAVEQLGR-LD 73 (227)
T ss_pred CCCEEEEecCCcHHHHHHHHHHH-----hh-CCEEEEeCCHHHHHHHHHHhccce-EEecCCCCHHHHHHHHHhcCC-CC
Confidence 35789999999999999999999 56 89999999765311 0124678 999999999999998887643 89
Q ss_pred eEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 85 NLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 85 ~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.|||+++.... .+...+.+|..+..++.+.+.+.+. ....+++++||...+
T Consensus 74 ~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~~~~v~~ss~~~~ 133 (227)
T PRK08219 74 VLVHNAGVADLGPVAESTVDEWRATLEVNVVAPAELTRLLLPALR--AAHGHVVFINSGAGL 133 (227)
T ss_pred EEEECCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--hCCCeEEEEcchHhc
Confidence 99999986432 2344567788774444444332110 012567888775544
No 127
>PRK06197 short chain dehydrogenase; Provisional
Probab=99.59 E-value=3.2e-14 Score=118.75 Aligned_cols=123 Identities=19% Similarity=0.085 Sum_probs=89.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|...++|+++||||||+||++++++|+ +.|++|+++.|+..+.. .....++ ++.+|++|.+++.+
T Consensus 11 ~~~~~~k~vlItGas~gIG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~d~~~v~~ 84 (306)
T PRK06197 11 IPDQSGRVAVVTGANTGLGYETAAALA-----AKGAHVVLAVRNLDKGKAAAARITAATPGADVT-LQELDLTSLASVRA 84 (306)
T ss_pred cccCCCCEEEEcCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEECCCCCHHHHHH
Confidence 444567899999999999999999999 68999999999754310 0124577 88999999998888
Q ss_pred HHHhccc---ccceEEeecccCC-------chhHHHHhhcHHH----HHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ-------ESEEVNIFKNSTM----LKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~-------~~~~~~~~~n~~~----~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+++.+.. .+|++||+|+... +.+...+++|+.+ +..+++.+++. +..+|+++||...+
T Consensus 85 ~~~~~~~~~~~iD~li~nAg~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~ll~~l~~~-----~~~~iV~vSS~~~~ 156 (306)
T PRK06197 85 AADALRAAYPRIDLLINNAGVMYTPKQTTADGFELQFGTNHLGHFALTGLLLDRLLPV-----PGSRVVTVSSGGHR 156 (306)
T ss_pred HHHHHHhhCCCCCEEEECCccccCCCccCCCCcchhhhhhhHHHHHHHHHHHHHHhhC-----CCCEEEEECCHHHh
Confidence 7765421 3899999998632 1344567889888 44455555443 23688888876543
No 128
>PRK07825 short chain dehydrogenase; Provisional
Probab=99.59 E-value=1.9e-14 Score=118.04 Aligned_cols=122 Identities=17% Similarity=-0.025 Sum_probs=88.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
++++++||||||+||++++++|+ ++|++|++++|+++... .....++ ++.+|++|++++.+.++.+..
T Consensus 4 ~~~~ilVtGasggiG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 77 (273)
T PRK07825 4 RGKVVAITGGARGIGLATARALA-----ALGARVAIGDLDEALAKETAAELGLVV-GGPLDVTDPASFAAFLDAVEADLG 77 (273)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccce-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999999 68999999999765321 0112578 899999999988777766532
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|.+||+++.... .+...+++|+.++.++.+++...+. ..+..+|+++||...
T Consensus 78 ~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~-~~~~g~iv~isS~~~ 140 (273)
T PRK07825 78 PIDVLVNNAGVMPVGPFLDEPDAVTRRILDVNVYGVILGSKLAAPRMV-PRGRGHVVNVASLAG 140 (273)
T ss_pred CCCEEEECCCcCCCCccccCCHHHHHHHHHHHHHHHHHHHHHHHHHHH-hCCCCEEEEEcCccc
Confidence 37999999986321 2345678999888777776654321 013468888887543
No 129
>PRK07775 short chain dehydrogenase; Provisional
Probab=99.59 E-value=5.5e-14 Score=115.54 Aligned_cols=125 Identities=14% Similarity=0.059 Sum_probs=89.8
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
...+|+++||||+|+||++++++|+ ++|++|+++.|+..... .....++ ++.+|++|++++.+.++.
T Consensus 7 ~~~~~~vlVtGa~g~iG~~la~~L~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~ 80 (274)
T PRK07775 7 HPDRRPALVAGASSGIGAATAIELA-----AAGFPVALGARRVEKCEELVDKIRADGGEAV-AFPLDVTDPDSVKSFVAQ 80 (274)
T ss_pred CCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3445799999999999999999999 68999999988754210 0124577 889999999998888775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|++||+++.... .+...+++|+.++.++++++...+. ..+..+|+++||...|
T Consensus 81 ~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~l~~~~-~~~~g~iv~isS~~~~ 150 (274)
T PRK07775 81 AEEALGEIEVLVSGAGDTYFGKLHEISTEQFESQVQIHLVGANRLATAVLPGMI-ERRRGDLIFVGSDVAL 150 (274)
T ss_pred HHHhcCCCCEEEECCCcCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCceEEEECChHhc
Confidence 421 27999999986421 2334568899999888887653210 0123578888876544
No 130
>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.59 E-value=3.5e-14 Score=114.54 Aligned_cols=123 Identities=11% Similarity=-0.004 Sum_probs=89.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
..+++|||||||+||++++++|+ +.|++|++++|++.+.. . ....+. ++.+|++|++++...++.+.
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 77 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFA-----AEGARVVVTDRNEEAAERVAAEILAGGRAI-AVAADVSDEADVEAAVAAALE 77 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 45799999999999999999999 68999999999875321 0 124577 89999999999888776541
Q ss_pred --cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 --QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 --~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|+|||+++... ..+...+++|+.++.++++.+...+. ..+.++|+++||...+
T Consensus 78 ~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~~~~ 145 (251)
T PRK07231 78 RFGSVDILVNNAGTTHRNGPLLDVDEAEFDRIFAVNVKSPYLWTQAAVPAMR-GEGGGAIVNVASTAGL 145 (251)
T ss_pred HhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEEcChhhc
Confidence 12899999997632 13445678899887777776664310 0134678888875444
No 131
>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.59 E-value=3.2e-14 Score=115.56 Aligned_cols=123 Identities=16% Similarity=-0.020 Sum_probs=86.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++|+++||||+|+||++++++|+ +.|++|+++.|+.... .....++. ++.+|++|++++.++++.+.. .
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~ 79 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFL-----REGAKVAVLYNSAENEAKELREKGVF-TIKCDVGNRDQVKKSKEVVEKEFGR 79 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHhCCCe-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999999999 6899998887754321 11123578 899999999988888776421 2
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|++||+++... .++...+++|+.++..+...+...+. ..+..+|+++||...+
T Consensus 80 id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~-~~~~g~iv~isS~~~~ 142 (255)
T PRK06463 80 VDVLVNNAGIMYLMPFEEFDEEKYNKMIKINLNGAIYTTYEFLPLLK-LSKNGAIVNIASNAGI 142 (255)
T ss_pred CCEEEECCCcCCCCChhhCCHHHHHHHHhHhhHHHHHHHHHHHHHHH-hcCCcEEEEEcCHHhC
Confidence 899999997632 13445678899986555444433210 0123578888875544
No 132
>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional
Probab=99.58 E-value=6.3e-14 Score=113.92 Aligned_cols=121 Identities=11% Similarity=-0.012 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|++|||||+|+||++++++|+ +.|++|++++|+..... . ....++ ++.+|++|.+++..+++.
T Consensus 1 m~k~ilItG~~~~IG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~ 74 (259)
T PRK12384 1 MNQVAVVIGGGQTLGAFLCHGLA-----EEGYRVAVADINSEKAANVAQEINAEYGEGMAY-GFGADATSEQSVLALSRG 74 (259)
T ss_pred CCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHhcCCceeE-EEEccCCCHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754310 0 013578 899999999888777765
Q ss_pred cc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 IS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+. ..+|.+||+++.... ++...+++|+.++.++++++...+.....-.+++++||.
T Consensus 75 ~~~~~~~id~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~~~iv~~ss~ 142 (259)
T PRK12384 75 VDEIFGRVDLLVYNAGIAKAAFITDFQLGDFDRSLQVNLVGYFLCAREFSRLMIRDGIQGRIIQINSK 142 (259)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhccHHHHHHHHHHHHHHHhCCCCcEEEEecCc
Confidence 42 138999999976321 345567899999877777665532101112467777663
No 133
>PRK05693 short chain dehydrogenase; Provisional
Probab=99.58 E-value=2.8e-14 Score=117.10 Aligned_cols=117 Identities=19% Similarity=0.123 Sum_probs=86.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc---cccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS---QEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~~~ 85 (211)
|++|||||||+||++++++|+ +.|++|++++|+..... ....+++ ++.+|++|++++.+.++.+. ..+|.
T Consensus 2 k~vlItGasggiG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 75 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFK-----AAGYEVWATARKAEDVEALAAAGFT-AVQLDVNDGAALARLAEELEAEHGGLDV 75 (274)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHCCCe-EEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 789999999999999999999 68999999999765321 1123577 89999999998887776551 12899
Q ss_pred EEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 86 LFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 86 v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+||+++... .++...+++|+.++.++++++...+. .+..+++++||.
T Consensus 76 vi~~ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~--~~~g~iv~isS~ 131 (274)
T PRK05693 76 LINNAGYGAMGPLLDGGVEAMRRQFETNVFAVVGVTRALFPLLR--RSRGLVVNIGSV 131 (274)
T ss_pred EEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHh--hcCCEEEEECCc
Confidence 999998532 13445678999998888887754321 122466777664
No 134
>PRK08265 short chain dehydrogenase; Provisional
Probab=99.58 E-value=4.4e-14 Score=115.27 Aligned_cols=124 Identities=12% Similarity=0.004 Sum_probs=91.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.++.+|+++||||||+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+
T Consensus 1 m~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (261)
T PRK08265 1 MIGLAGKVAIVTGGATLIGAAVARALV-----AAGARVAIVDIDADNGAAVAASLGERAR-FIATDITDDAAIERAVATV 74 (261)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCeeE-EEEecCCCHHHHHHHHHHH
Confidence 444556899999999999999999999 68999999999865311 1134578 8999999999888777654
Q ss_pred cc---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 80 SQ---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.. .+|++||+++... .++.+.+++|+.++.++++++...+. .+-.+++++||..
T Consensus 75 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~--~~~g~ii~isS~~ 139 (261)
T PRK08265 75 VARFGRVDILVNLACTYLDDGLASSRADWLAALDVNLVSAAMLAQAAHPHLA--RGGGAIVNFTSIS 139 (261)
T ss_pred HHHhCCCCEEEECCCCCCCCcCcCCHHHHHHHHhHhhHHHHHHHHHHHHHHh--cCCcEEEEECchh
Confidence 21 2899999997531 13456778899988888887765421 1224677777643
No 135
>KOG1431 consensus GDP-L-fucose synthetase [Carbohydrate transport and metabolism; Posttranslational modification, protein turnover, chaperones]
Probab=99.58 E-value=6.6e-15 Score=115.15 Aligned_cols=152 Identities=16% Similarity=0.130 Sum_probs=113.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++|||||++|.+|++|++.+. +++. +-+.+. . .-.+|+++.++.+..|+..+ +.|||
T Consensus 2 ~kIlVtGg~GLVGsAi~~vv~-----~q~~~~e~wvf~-------------~-skd~DLt~~a~t~~lF~~ek--PthVI 60 (315)
T KOG1431|consen 2 KKILVTGGTGLVGSAIVKVVQ-----EQGFDDENWVFI-------------G-SKDADLTNLADTRALFESEK--PTHVI 60 (315)
T ss_pred ceEEEecCCchHHHHHHHHHH-----hcCCCCcceEEe-------------c-cccccccchHHHHHHHhccC--Cceee
Confidence 789999999999999999998 4554 111110 1 23589999999999999876 89999
Q ss_pred eecccCC------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCC
Q 028258 88 WVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDS 161 (211)
Q Consensus 88 ~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~ 161 (211)
|+|+... ..+.+.++.|+.+-.|++..+... +++++++..|+..|-.- ...|++|+.
T Consensus 61 hlAAmVGGlf~N~~ynldF~r~Nl~indNVlhsa~e~-----gv~K~vsclStCIfPdk------------t~yPIdEtm 123 (315)
T KOG1431|consen 61 HLAAMVGGLFHNNTYNLDFIRKNLQINDNVLHSAHEH-----GVKKVVSCLSTCIFPDK------------TSYPIDETM 123 (315)
T ss_pred ehHhhhcchhhcCCCchHHHhhcceechhHHHHHHHh-----chhhhhhhcceeecCCC------------CCCCCCHHH
Confidence 9987633 246678899999999999999887 67777777666676321 256899987
Q ss_pred CCCCC---CCcchhHHHHHhh-------cCCCceEEEecCCceEecCC
Q 028258 162 SRLPF---PNFYYELEDVSAS-------YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 162 ~~~~~---~~~~~~~e~~l~~-------~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ .++.|+..|.+.+ .+.|++++.+-|+++|||.+
T Consensus 124 vh~gpphpsN~gYsyAKr~idv~n~aY~~qhg~~~tsviPtNvfGphD 171 (315)
T KOG1431|consen 124 VHNGPPHPSNFGYSYAKRMIDVQNQAYRQQHGRDYTSVIPTNVFGPHD 171 (315)
T ss_pred hccCCCCCCchHHHHHHHHHHHHHHHHHHHhCCceeeeccccccCCCC
Confidence 44322 2555666664443 36899999999999999985
No 136
>PRK10538 malonic semialdehyde reductase; Provisional
Probab=99.58 E-value=5e-14 Score=114.03 Aligned_cols=119 Identities=16% Similarity=0.065 Sum_probs=85.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
++++||||||+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+++.+.++.+.. .
T Consensus 1 ~~vlItGasg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~~~~ 74 (248)
T PRK10538 1 MIVLVTGATAGFGECITRRFI-----QQGHKVIATGRRQERLQELKDELGDNLY-IAQLDVRNRAAIEEMLASLPAEWRN 74 (248)
T ss_pred CEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHhccceE-EEEecCCCHHHHHHHHHHHHHHcCC
Confidence 369999999999999999999 68999999999865321 0124678 899999999988877765421 2
Q ss_pred cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 83 ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 83 ~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|.++|+++... ..+...+++|+.++..+++.+...+. ..+..+++++||..
T Consensus 75 id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~ 136 (248)
T PRK10538 75 IDVLVNNAGLALGLEPAHKASVEDWETMIDTNNKGLVYMTRAVLPGMV-ERNHGHIINIGSTA 136 (248)
T ss_pred CCEEEECCCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCcc
Confidence 899999997531 13345678898886666665543210 01346788887743
No 137
>PRK12935 acetoacetyl-CoA reductase; Provisional
Probab=99.57 E-value=8.4e-14 Score=112.32 Aligned_cols=123 Identities=15% Similarity=-0.020 Sum_probs=88.0
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
.++.+|++|||||+|+||++++++|+ ++|++|+++.++... .. ....++. ++.+|++|++++.+++
T Consensus 2 ~~~~~~~~lItG~s~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~ 75 (247)
T PRK12935 2 VQLNGKVAIVTGGAKGIGKAITVALA-----QEGAKVVINYNSSKEAAENLVNELGKEGHDVY-AVQADVSKVEDANRLV 75 (247)
T ss_pred CCCCCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHH
Confidence 34456999999999999999999999 689999876554321 10 0123577 8999999999888877
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.. .+|+|||+++... ..+.+.+++|+.++.++++++...+... ...+++++||.
T Consensus 76 ~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 144 (247)
T PRK12935 76 EEAVNHFGKVDILVNNAGITRDRTFKKLNREDWERVIDVNLSSVFNTTSAVLPYITEA-EEGRIISISSI 144 (247)
T ss_pred HHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCcEEEEEcch
Confidence 66421 2899999998633 1344567899999988888876532001 23578888774
No 138
>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase. This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.
Probab=99.57 E-value=4.9e-14 Score=113.75 Aligned_cols=166 Identities=12% Similarity=0.018 Sum_probs=109.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.++|++|||||+|+||++++++|+ ++|++|++++|+.... ......+. ++.+|+++++++...++.+.
T Consensus 3 ~~~k~vlItGas~gIG~~ia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 76 (248)
T TIGR01832 3 LEGKVALVTGANTGLGQGIAVGLA-----EAGADIVGAGRSEPSETQQQVEALGRRFL-SLTADLSDIEAIKALVDSAVE 76 (248)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHhcCCceE-EEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999 6899999999865321 01124578 89999999998877766532
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
..+|++||+++.... .+.+.+++|+.++.++++++...+.......+++++||...|...
T Consensus 77 ~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~--------- 147 (248)
T TIGR01832 77 EFGHIDILVNNAGIIRRADAEEFSEKDWDDVMNVNLKSVFFLTQAAAKHFLKQGRGGKIINIASMLSFQGG--------- 147 (248)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEecHHhccCC---------
Confidence 138999999976321 344567899998888888776432001113578888876554311
Q ss_pred CCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 150 LMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ..+ .........+.+.+. ...++++..++|+.+..+.
T Consensus 148 ------~---~~~--~Y~~sKaa~~~~~~~la~e~~~~gi~v~~v~pg~v~t~~ 190 (248)
T TIGR01832 148 ------I---RVP--SYTASKHGVAGLTKLLANEWAAKGINVNAIAPGYMATNN 190 (248)
T ss_pred ------C---CCc--hhHHHHHHHHHHHHHHHHHhCccCcEEEEEEECcCcCcc
Confidence 0 000 000111122222211 3468999999999997764
No 139
>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.57 E-value=6.2e-14 Score=113.25 Aligned_cols=122 Identities=9% Similarity=-0.131 Sum_probs=87.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.++++|||||+|+||++++++|+ ++|++|+++.|+..... .....+. ++.+|+++++++...++.
T Consensus 4 ~~~~~vlitGasg~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 77 (252)
T PRK06077 4 LKDKVVVVTGSGRGIGRAIAVRLA-----KEGSLVVVNAKKRAEEMNETLKMVKENGGEGI-GVLADVSTREGCETLAKA 77 (252)
T ss_pred CCCcEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHHcCCeeE-EEEeccCCHHHHHHHHHH
Confidence 345899999999999999999999 68999887776432100 0123566 789999999988777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.. .+|+|||+++.... .+...+++|+.+..++++++.+.+ ..-.+|+++||...|
T Consensus 78 ~~~~~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~sS~~~~ 145 (252)
T PRK06077 78 TIDRYGVADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEM---REGGAIVNIASVAGI 145 (252)
T ss_pred HHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHh---hcCcEEEEEcchhcc
Confidence 421 38999999986221 234567889999888888887652 122478888776544
No 140
>PRK06123 short chain dehydrogenase; Provisional
Probab=99.57 E-value=5.3e-14 Score=113.46 Aligned_cols=165 Identities=12% Similarity=0.014 Sum_probs=105.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC-------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG-------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|++++|||||+|+||++++++|+ +.|++|+.+.++.. .. ......+. ++.+|++|.+++.++++.+
T Consensus 1 ~~~~~lVtG~~~~iG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06123 1 MRKVMIITGASRGIGAATALLAA-----ERGYAVCLNYLRNRDAAEAVVQAIRRQGGEAL-AVAADVADEADVLRLFEAV 74 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEecCCCHHHHHHHHHHHHhCCCcEE-EEEeccCCHHHHHHHHHHH
Confidence 46789999999999999999999 68999887765432 11 00124577 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCC--CCCceEEEEeecCee-eecccCC
Q 028258 80 SQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSG--RSRLRHVALLTGTKH-YMGPIFD 143 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~--~~~~~~~~~~s~~~~-y~~~~~~ 143 (211)
.. .+|.|||+++.... ++...+++|+.++.++++++...+.. ...-.+|+++||... |+.+
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~~~--- 151 (248)
T PRK06123 75 DRELGRLDALVNNAGILEAQMRLEQMDAARLTRIFATNVVGSFLCAREAVKRMSTRHGGRGGAIVNVSSMAARLGSP--- 151 (248)
T ss_pred HHHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCCCCeEEEEECchhhcCCCC---
Confidence 21 28999999976421 23456789999988888877654200 001135777776432 3211
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.... .....+...+.+... ...+++++++||+.++++.
T Consensus 152 ---------------~~~~--~Y~~sKaa~~~~~~~la~~~~~~~i~v~~i~pg~v~~~~ 194 (248)
T PRK06123 152 ---------------GEYI--DYAASKGAIDTMTIGLAKEVAAEGIRVNAVRPGVIYTEI 194 (248)
T ss_pred ---------------CCcc--chHHHHHHHHHHHHHHHHHhcccCeEEEEEecCcccCch
Confidence 0000 001111222332222 3468999999999999974
No 141
>PRK08017 oxidoreductase; Provisional
Probab=99.57 E-value=6.9e-14 Score=113.32 Aligned_cols=115 Identities=18% Similarity=0.148 Sum_probs=83.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc----ccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS----QEI 83 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~~ 83 (211)
.|+++||||||+||+++++.|+ ++|++|++++|++.+.. ....+++ ++.+|++|.+++.+.++.+. ..+
T Consensus 2 ~k~vlVtGasg~IG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~~~~~~ 75 (256)
T PRK08017 2 QKSVLITGCSSGIGLEAALELK-----RRGYRVLAACRKPDDVARMNSLGFT-GILLDLDDPESVERAADEVIALTDNRL 75 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHhHHHHhCCCe-EEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 4789999999999999999999 68999999999765421 1123578 89999999988777665542 126
Q ss_pred ceEEeecccCCc---------hhHHHHhhcHHHHHHH----HHHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE---------SEEVNIFKNSTMLKNV----LSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l----~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.++|+++.... .+...+++|+.++.++ ++.+.+. +..+++++||.
T Consensus 76 ~~ii~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~-----~~~~iv~~ss~ 134 (256)
T PRK08017 76 YGLFNNAGFGVYGPLSTISRQQMEQQFSTNFFGTHQLTMLLLPAMLPH-----GEGRIVMTSSV 134 (256)
T ss_pred eEEEECCCCCCccchhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCCEEEEEcCc
Confidence 889999875321 2345678898887775 4444443 34678888764
No 142
>PRK07576 short chain dehydrogenase; Provisional
Probab=99.57 E-value=6.2e-14 Score=114.66 Aligned_cols=126 Identities=13% Similarity=-0.047 Sum_probs=91.8
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|+.|...++|++|||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.
T Consensus 1 ~~~~~~~~~k~ilItGasggIG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~ 74 (264)
T PRK07576 1 MTTMFDFAGKNVVVVGGTSGINLGIAQAFA-----RAGANVAVASRSQEKVDAAVAQLQQAGPEGL-GVSADVRDYAAVE 74 (264)
T ss_pred CCccccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCceE-EEECCCCCHHHHH
Confidence 556665567899999999999999999999 68999999999754311 0123567 8899999999888
Q ss_pred HHHHhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 74 LKLSLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 74 ~~~~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.++.+. ..+|.+||+++... .++...+++|+.++.++++++...+.. .-.+|+++|+.
T Consensus 75 ~~~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~l~~--~~g~iv~iss~ 145 (264)
T PRK07576 75 AAFAQIADEFGPIDVLVSGAAGNFPAPAAGMSANGFKTVVDIDLLGTFNVLKAAYPLLRR--PGASIIQISAP 145 (264)
T ss_pred HHHHHHHHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh--CCCEEEEECCh
Confidence 8777642 12799999986421 134456789999999998887653210 11477777764
No 143
>PRK08251 short chain dehydrogenase; Provisional
Probab=99.57 E-value=6.6e-14 Score=112.99 Aligned_cols=121 Identities=12% Similarity=0.073 Sum_probs=87.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
|+|+++||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|++|++++.+.++.
T Consensus 1 ~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 74 (248)
T PRK08251 1 TRQKILITGASSGLGAGMAREFA-----AKGRDLALCARRTDRLEELKAELLARYPGIKVA-VAALDVNDHDQVFEVFAE 74 (248)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEcCCCCHHHHHHHHHH
Confidence 46889999999999999999999 68899999999864310 0134577 889999999988877765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.. .+|++||+++.... .+...+++|+.+..++++++...+. ..+..+|+++||..
T Consensus 75 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~ 142 (248)
T PRK08251 75 FRDELGGLDRVIVNAGIGKGARLGTGKFWANKATAETNFVAALAQCEAAMEIFR-EQGSGHLVLISSVS 142 (248)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcCcCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCCeEEEEeccc
Confidence 421 38999999976322 2345678899988887777643210 01346788887743
No 144
>PRK06701 short chain dehydrogenase; Provisional
Probab=99.57 E-value=1.2e-13 Score=114.65 Aligned_cols=162 Identities=10% Similarity=-0.069 Sum_probs=109.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.|++|||||+|+||++++++|+ +.|++|+++.|+.... . ....++. ++.+|++|.+.+.+.++.+
T Consensus 45 ~~k~iLItGasggIG~~la~~l~-----~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~i 118 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFA-----KEGADIAIVYLDEHEDANETKQRVEKEGVKCL-LIPGDVSDEAFCKDAVEET 118 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHH
Confidence 35899999999999999999999 6899999998875421 0 0124577 8899999999887777654
Q ss_pred cc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccc
Q 028258 80 SQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
.. .+|++||+++.... .+...+++|+.++.++++++...+. .-.+++++||...|...
T Consensus 119 ~~~~~~iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~---~~g~iV~isS~~~~~~~------ 189 (290)
T PRK06701 119 VRELGRLDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLK---QGSAIINTGSITGYEGN------ 189 (290)
T ss_pred HHHcCCCCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHh---hCCeEEEEecccccCCC------
Confidence 11 28999999976321 2345689999999999998876421 12478888887665321
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ ... .......+.+.+.+. ...+++++.+||+.++.+.
T Consensus 190 ---------~---~~~--~Y~~sK~a~~~l~~~la~~~~~~gIrv~~i~pG~v~T~~ 232 (290)
T PRK06701 190 ---------E---TLI--DYSATKGAIHAFTRSLAQSLVQKGIRVNAVAPGPIWTPL 232 (290)
T ss_pred ---------C---Ccc--hhHHHHHHHHHHHHHHHHHhhhcCeEEEEEecCCCCCcc
Confidence 0 000 001111112222222 2368999999999998764
No 145
>PRK12939 short chain dehydrogenase; Provisional
Probab=99.57 E-value=4.5e-14 Score=113.83 Aligned_cols=123 Identities=15% Similarity=0.017 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.++.+
T Consensus 5 ~~~~~vlItGa~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 78 (250)
T PRK12939 5 LAGKRALVTGAARGLGAAFAEALA-----EAGATVAFNDGLAAEARELAAALEAAGGRAH-AIAADLADPASVQRFFDAA 78 (250)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999988765311 0124578 8999999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|+|||+++.... .+...+.+|..++.++++++...+. ..+..+|+++||...
T Consensus 79 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~isS~~~ 146 (250)
T PRK12939 79 AAALGGLDGLVNNAGITNSKSATELDIDTWDAVMNVNVRGTFLMLRAALPHLR-DSGRGRIVNLASDTA 146 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEECchhh
Confidence 21 28999999986321 3345678899999888888765310 012347888877443
No 146
>PRK12742 oxidoreductase; Provisional
Probab=99.57 E-value=7.8e-14 Score=111.74 Aligned_cols=121 Identities=7% Similarity=-0.093 Sum_probs=87.1
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC--CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW--FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|..+++|++|||||+|+||++++++|+ ++|++|+++.|+.. ... ....+++ ++.+|++|.+++.+.++...
T Consensus 1 m~~~~~k~vlItGasggIG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 74 (237)
T PRK12742 1 MGAFTGKKVLVLGGSRGIGAAIVRRFV-----TDGANVRFTYAGSKDAAERLAQETGAT-AVQTDSADRDAVIDVVRKSG 74 (237)
T ss_pred CCCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHhCCe-EEecCCCCHHHHHHHHHHhC
Confidence 334556899999999999999999999 68999988766432 110 0112467 88999999988888877654
Q ss_pred cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. +|++||+++... .++...+++|+.++.+++..+...+ ..-.+++++||.
T Consensus 75 ~-id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~---~~~g~iv~isS~ 133 (237)
T PRK12742 75 A-LDILVVNAGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQM---PEGGRIIIIGSV 133 (237)
T ss_pred C-CcEEEECCCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHH---hcCCeEEEEecc
Confidence 3 899999997632 1345678999999888876665542 122477777764
No 147
>PRK08085 gluconate 5-dehydrogenase; Provisional
Probab=99.57 E-value=7.3e-14 Score=113.31 Aligned_cols=172 Identities=11% Similarity=0.000 Sum_probs=112.0
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTA 73 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~ 73 (211)
|+.+....+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. ++.+|++|++++.
T Consensus 1 ~~~~~~l~~k~~lItGas~giG~~ia~~L~-----~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~ 74 (254)
T PRK08085 1 MNDLFSLAGKNILITGSAQGIGFLLATGLA-----EYGAEIIINDITAERAELAVAKLRQEGIKAH-AAPFNVTHKQEVE 74 (254)
T ss_pred CcccccCCCCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEecCCCCHHHHH
Confidence 445444457899999999999999999999 68999999999764311 0123567 7899999999887
Q ss_pred HHHHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 74 LKLSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 74 ~~~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
+.++.+.. .+|.++|+++... .++...+++|+.++..+++++...+. ..+..+|+++||.....+
T Consensus 75 ~~~~~~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~~~-- 151 (254)
T PRK08085 75 AAIEHIEKDIGPIDVLINNAGIQRRHPFTEFPEQEWNDVIAVNQTAVFLVSQAVARYMV-KRQAGKIINICSMQSELG-- 151 (254)
T ss_pred HHHHHHHHhcCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HcCCcEEEEEccchhccC--
Confidence 77765421 3899999997632 14556789999998888887765321 012357888877432110
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
... .+ .....+...+.+.+. ...++.+..++|+.+..+..
T Consensus 152 ---------------~~~-~~--~Y~~sK~a~~~~~~~la~e~~~~gi~v~~v~pG~~~t~~~ 196 (254)
T PRK08085 152 ---------------RDT-IT--PYAASKGAVKMLTRGMCVELARHNIQVNGIAPGYFKTEMT 196 (254)
T ss_pred ---------------CCC-Cc--chHHHHHHHHHHHHHHHHHHHhhCeEEEEEEeCCCCCcch
Confidence 000 00 000111222222222 34689999999999988743
No 148
>PLN02253 xanthoxin dehydrogenase
Probab=99.56 E-value=9.6e-14 Score=114.22 Aligned_cols=121 Identities=12% Similarity=-0.055 Sum_probs=87.2
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+++|++|||||+|+||++++++|+ +.|++|++++|+..... ....+++ ++.+|++|++++.++++.+
T Consensus 15 ~l~~k~~lItGas~gIG~~la~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~~~~~ 88 (280)
T PLN02253 15 RLLGKVALVTGGATGIGESIVRLFH-----KHGAKVCIVDLQDDLGQNVCDSLGGEPNVC-FFHCDVTVEDDVSRAVDFT 88 (280)
T ss_pred ccCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHhcCCCceE-EEEeecCCHHHHHHHHHHH
Confidence 3356899999999999999999999 68999999998654210 1124678 9999999999888777654
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|++||+|+... .++...+++|+.++.++++++...+... +-.++++++|
T Consensus 89 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~-~~g~ii~isS 155 (280)
T PLN02253 89 VDKFGTLDIMVNNAGLTGPPCPDIRNVELSEFEKVFDVNVKGVFLGMKHAARIMIPL-KKGSIVSLCS 155 (280)
T ss_pred HHHhCCCCEEEECCCcCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhc-CCceEEEecC
Confidence 21 2899999997632 1345678999999988888776432001 1235666655
No 149
>PRK06198 short chain dehydrogenase; Provisional
Probab=99.56 E-value=5.9e-14 Score=114.07 Aligned_cols=169 Identities=12% Similarity=0.018 Sum_probs=111.0
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.+++.|+++||||+|+||++++++|+ +.|++ |++++|++.... .....+. ++.+|+++++++.+.
T Consensus 1 ~~~~~~k~vlItGa~g~iG~~la~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~ 74 (260)
T PRK06198 1 MGRLDGKVALVTGGTQGLGAAIARAFA-----ERGAAGLVICGRNAEKGEAQAAELEALGAKAV-FVQADLSDVEDCRRV 74 (260)
T ss_pred CCCCCCcEEEEeCCCchHHHHHHHHHH-----HCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHH
Confidence 455667999999999999999999999 68999 999998754311 0123567 889999999988887
Q ss_pred HHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++.+.. .+|.+||+++.... .+...+++|+.++.++++++...+.......+++++||...+++.
T Consensus 75 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~ss~~~~~~~--- 151 (260)
T PRK06198 75 VAAADEAFGRLDALVNAAGLTDRGTILDTSPELFDRHFAVNVRAPFFLMQEAIKLMRRRKAEGTIVNIGSMSAHGGQ--- 151 (260)
T ss_pred HHHHHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCEEEEECCcccccCC---
Confidence 765421 28999999986321 234567899999888888776532101112467888776554321
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
+ . .. .........+.+... ...++.++.++|+.+.++.
T Consensus 152 ------------~--~-~~--~Y~~sK~a~~~~~~~~a~e~~~~~i~v~~i~pg~~~t~~ 194 (260)
T PRK06198 152 ------------P--F-LA--AYCASKGALATLTRNAAYALLRNRIRVNGLNIGWMATEG 194 (260)
T ss_pred ------------C--C-cc--hhHHHHHHHHHHHHHHHHHhcccCeEEEEEeeccccCcc
Confidence 0 0 00 000111122222221 3467999999999998874
No 150
>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.56 E-value=5.3e-14 Score=113.61 Aligned_cols=164 Identities=10% Similarity=-0.029 Sum_probs=106.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++++|||||+|+||++++++|+ +.|++|++ ..|+..+.. ....++. ++.+|++|++++..+++.+
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLA-----EEGYDIAVNYARSRKAAEETAEEIEALGRKAL-AVKANVGDVEKIKEMFAQI 76 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 34799999999999999999999 68999876 466543210 0134577 8999999999888887765
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|+|||+++.... .+...+.+|..++.++++++...+. ..+.++|+++||...+..
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~g~iv~~sS~~~~~~-------- 147 (250)
T PRK08063 77 DEEFGRLDVFVNNAASGVLRPAMELEESHWDWTMNINAKALLFCAQEAAKLME-KVGGGKIISLSSLGSIRY-------- 147 (250)
T ss_pred HHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEcchhhccC--------
Confidence 21 28999999975321 2233567899998888888876421 113468888887533210
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
... .+ .....+...+.+... ...+++++.++|+.+..+.
T Consensus 148 ---------~~~-~~--~y~~sK~a~~~~~~~~~~~~~~~~i~v~~i~pg~v~t~~ 191 (250)
T PRK08063 148 ---------LEN-YT--TVGVSKAALEALTRYLAVELAPKGIAVNAVSGGAVDTDA 191 (250)
T ss_pred ---------CCC-cc--HHHHHHHHHHHHHHHHHHHHhHhCeEEEeEecCcccCch
Confidence 000 00 000111222222222 2468999999999998664
No 151
>PRK07478 short chain dehydrogenase; Provisional
Probab=99.56 E-value=1e-13 Score=112.47 Aligned_cols=123 Identities=15% Similarity=-0.036 Sum_probs=87.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++|+++||||+|+||++++++|+ +.|++|++++|++.+.. ....++. ++.+|++|++++.+.++.+
T Consensus 4 ~~~k~~lItGas~giG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 77 (254)
T PRK07478 4 LNGKVAIITGASSGIGRAAAKLFA-----REGAKVVVGARRQAELDQLVAEIRAEGGEAV-ALAGDVRDEAYAKALVALA 77 (254)
T ss_pred CCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0124577 8899999999887777654
Q ss_pred cc---ccceEEeecccCC---c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 SQ---EITNLFWVPLQVQ---E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. .+|++||+++... . ++...+++|+.+...+.+++...+... +..+++++||...
T Consensus 78 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~l~~~-~~~~iv~~sS~~~ 146 (254)
T PRK07478 78 VERFGGLDIAFNNAGTLGEMGPVAEMSLEGWRETLATNLTSAFLGAKHQIPAMLAR-GGGSLIFTSTFVG 146 (254)
T ss_pred HHhcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCceEEEEechHh
Confidence 21 3899999998632 1 345567899987766655544321001 2356888877543
No 152
>PRK07102 short chain dehydrogenase; Provisional
Probab=99.56 E-value=7e-14 Score=112.67 Aligned_cols=118 Identities=17% Similarity=0.057 Sum_probs=87.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
|+++||||||+||++++++|+ ++|++|++++|+++... ....+++ ++.+|++|++++.+.++.+..
T Consensus 2 ~~vlItGas~giG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 75 (243)
T PRK07102 2 KKILIIGATSDIARACARRYA-----AAGARLYLAARDVERLERLADDLRARGAVAVS-THELDILDTASHAAFLDSLPA 75 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHH-----hcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEE-EEecCCCChHHHHHHHHHHhh
Confidence 689999999999999999999 68999999999865321 0134688 999999999998888876543
Q ss_pred ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.++|+++.... ++.+.+++|+.++.++++++...+... +..+++++||.
T Consensus 76 ~~d~vv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~ 136 (243)
T PRK07102 76 LPDIVLIAVGTLGDQAACEADPALALREFRTNFEGPIALLTLLANRFEAR-GSGTIVGISSV 136 (243)
T ss_pred cCCEEEECCcCCCCcccccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhC-CCCEEEEEecc
Confidence 37899998875321 223457889999888888776532101 34677887764
No 153
>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.56 E-value=7.5e-14 Score=113.36 Aligned_cols=125 Identities=14% Similarity=0.064 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+.+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++. ++.+|++|++++.++++.+.
T Consensus 6 l~~k~~lItGas~gIG~aia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 79 (251)
T PRK12481 6 LNGKVAIITGCNTGLGQGMAIGLA-----KAGADIVGVGVAEAPETQAQVEALGRKFH-FITADLIQQKDIDSIVSQAVE 79 (251)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCchHHHHHHHHHHcCCeEE-EEEeCCCCHHHHHHHHHHHHH
Confidence 456899999999999999999999 79999999888643210 1134577 89999999998888776542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++... .++...+++|+.++..+.+++...+.....-.+++++||...+
T Consensus 80 ~~g~iD~lv~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~~~~g~ii~isS~~~~ 147 (251)
T PRK12481 80 VMGHIDILINNAGIIRRQDLLEFGNKDWDDVININQKTVFFLSQAVAKQFVKQGNGGKIINIASMLSF 147 (251)
T ss_pred HcCCCCEEEECCCcCCCCCcccCCHHHHHHHheeCcHHHHHHHHHHHHHHHHcCCCCEEEEeCChhhc
Confidence 13899999998632 1455678899998887777765432101112478888775444
No 154
>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated
Probab=99.56 E-value=8.8e-14 Score=111.69 Aligned_cols=120 Identities=15% Similarity=0.038 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||||+||+++++.|+ ++|++|+++.|++... ......+. ++.+|++|++++.++++.+
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 77 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLA-----AQGANVVINYASSEAGAEALVAEIGALGGKAL-AVQGDVSDAESVERAVDEA 77 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 35789999999999999999999 6899998888875521 01235677 8899999999888877654
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|+|||+++.... .+...+.+|+.++.++++++...+. ..+.++|+++||.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~iss~ 143 (248)
T PRK05557 78 KAEFGGVDILVNNAGITRDNLLMRMKEEDWDRVIDTNLTGVFNLTKAVARPMM-KQRSGRIINISSV 143 (248)
T ss_pred HHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEEccc
Confidence 21 27999999976331 2344578899998888888875411 1134578888764
No 155
>PRK12743 oxidoreductase; Provisional
Probab=99.56 E-value=9.3e-14 Score=112.94 Aligned_cols=162 Identities=12% Similarity=0.008 Sum_probs=107.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|++|||||||+||++++++|+ +.|++|+++.|+.... . ....+++ ++.+|++|++++..+++.+
T Consensus 1 ~~k~vlItGas~giG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (256)
T PRK12743 1 MAQVAIVTASDSGIGKACALLLA-----QQGFDIGITWHSDEEGAKETAEEVRSHGVRAE-IRQLDLSDLPEGAQALDKL 74 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHH
Confidence 46899999999999999999999 6899998887654321 0 1134678 8999999998877766654
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
.. .+|++||+++... .++...+.+|+.+..++++++...+.....-.+|+++||....
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~~~---------- 144 (256)
T PRK12743 75 IQRLGRIDVLVNNAGAMTKAPFLDMDFDEWRKIFTVDVDGAFLCSQIAARHMVKQGQGGRIINITSVHEH---------- 144 (256)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCeEEEEEeecccc----------
Confidence 21 3899999997632 1345567899999999988776542001112478887764211
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcch----hHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYY----ELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~----~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.+.. ....|. ..+.+.+. ...++.++.++|+.+..+..
T Consensus 145 -------~~~~-------~~~~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~Pg~~~t~~~ 191 (256)
T PRK12743 145 -------TPLP-------GASAYTAAKHALGGLTKAMALELVEHGILVNAVAPGAIATPMN 191 (256)
T ss_pred -------CCCC-------CcchhHHHHHHHHHHHHHHHHHhhhhCeEEEEEEeCCccCccc
Confidence 0100 011222 22222222 34689999999999988743
No 156
>PRK05854 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.9e-13 Score=114.64 Aligned_cols=126 Identities=16% Similarity=0.054 Sum_probs=90.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++|+++||||||+||.+++++|+ +.|++|+++.|+..+.. .....++ ++.+|++|.+++.+
T Consensus 9 ~~~l~gk~~lITGas~GIG~~~a~~La-----~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~d~~sv~~ 82 (313)
T PRK05854 9 VPDLSGKRAVVTGASDGLGLGLARRLA-----AAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLS-LRALDLSSLASVAA 82 (313)
T ss_pred CcccCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceE-EEEecCCCHHHHHH
Confidence 344567999999999999999999999 68999999999765311 0123578 89999999998887
Q ss_pred HHHhcc---cccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 75 KLSLIS---QEITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 75 ~~~~~~---~~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+++.+. ..+|++||+|+... ..++..+.+|+.+...+.+.+...+... -.+++++||...+
T Consensus 83 ~~~~~~~~~~~iD~li~nAG~~~~~~~~~t~~~~e~~~~vN~~g~~~l~~~llp~l~~~--~~riv~vsS~~~~ 154 (313)
T PRK05854 83 LGEQLRAEGRPIHLLINNAGVMTPPERQTTADGFELQFGTNHLGHFALTAHLLPLLRAG--RARVTSQSSIAAR 154 (313)
T ss_pred HHHHHHHhCCCccEEEECCccccCCccccCcccHHHHhhhhhHHHHHHHHHHHHHHHhC--CCCeEEEechhhc
Confidence 776542 13899999998632 1344567899998777777665432111 2467777776544
No 157
>PRK08213 gluconate 5-dehydrogenase; Provisional
Probab=99.55 E-value=1.8e-13 Score=111.25 Aligned_cols=123 Identities=16% Similarity=0.013 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+|+||++++++|+ +.|++|++++|+..+.. .....+. ++.+|++|++++.+.++.+.
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~-~~~~Dl~d~~~i~~~~~~~~ 84 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALG-----EAGARVVLSARKAEELEEAAAHLEALGIDAL-WIAADVADEADIERLAEETL 84 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754311 1124577 89999999998876665431
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc-CCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS-NSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~-~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|.|||+++... ..+...+++|+.++.++++++... +. ..+..+|+++||...+
T Consensus 85 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~l~-~~~~~~~v~~sS~~~~ 153 (259)
T PRK08213 85 ERFGHVDILVNNAGATWGAPAEDHPVEAWDKVMNLNVRGLFLLSQAVAKRSMI-PRGYGRIINVASVAGL 153 (259)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHhHHhHHHHHHHHHHHHHHHH-hcCCeEEEEECChhhc
Confidence 1 2899999997632 134456789999999999977543 11 1134678888875444
No 158
>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.55 E-value=9.2e-14 Score=111.41 Aligned_cols=119 Identities=13% Similarity=-0.003 Sum_probs=84.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++|++|||||+|+||+++++.|+ +.|++|++++|++.... ....+++ ++.+|++|++++.+.+++..
T Consensus 3 ~~~~~vlItGa~g~iG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 76 (238)
T PRK05786 3 LKGKKVAIIGVSEGLGYAVAYFAL-----KEGAQVCINSRNENKLKRMKKTLSKYGNIH-YVVGDVSSTESARNVIEKAA 76 (238)
T ss_pred cCCcEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeE-EEECCCCCHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765321 0123578 89999999998887776543
Q ss_pred c---ccceEEeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|.++++++.... .....+++|+.+..++++.+...+. .-.+++++|+.
T Consensus 77 ~~~~~id~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~~~iv~~ss~ 137 (238)
T PRK05786 77 KVLNAIDGLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLK---EGSSIVLVSSM 137 (238)
T ss_pred HHhCCCCEEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHh---cCCEEEEEecc
Confidence 2 26888888865321 2234567888887777777765421 12456666653
No 159
>PRK06181 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.1e-13 Score=112.73 Aligned_cols=120 Identities=13% Similarity=-0.046 Sum_probs=87.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
+++|||||+|+||+++++.|+ +.|++|++++|++.... ....++. ++.+|++|++++..+++.+..
T Consensus 2 ~~vlVtGasg~iG~~la~~l~-----~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 75 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLA-----RAGAQLVLAARNETRLASLAQELADHGGEAL-VVPTDVSDAEACERLIEAAVAR 75 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHH
Confidence 679999999999999999999 68999999999754311 1134677 889999999988887775421
Q ss_pred --ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 --EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 --~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|.|||+++.... .+.+.+++|+.++.++++.+...+ .....+++++||...|
T Consensus 76 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~--~~~~~~iv~~sS~~~~ 141 (263)
T PRK06181 76 FGGIDILVNNAGITMWSRFDELTDLSVFERVMRVNYLGAVYCTHAALPHL--KASRGQIVVVSSLAGL 141 (263)
T ss_pred cCCCCEEEECCCcccccchhccCCHHHHHHHHHHhhHHHHHHHHHHHHHH--HhcCCEEEEEeccccc
Confidence 28999999976331 123457899999999988876431 0123567777775544
No 160
>PRK05866 short chain dehydrogenase; Provisional
Probab=99.55 E-value=1.8e-13 Score=113.75 Aligned_cols=122 Identities=14% Similarity=-0.013 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+++++||||||+||++++++|+ ++|++|++++|+.+... .....+. ++.+|++|.+++.+.++.+.
T Consensus 39 ~~k~vlItGasggIG~~la~~La-----~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~ 112 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFA-----RRGATVVAVARREDLLDAVADRITRAGGDAM-AVPCDLSDLDAVDALVADVE 112 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 45889999999999999999999 68999999999864311 0123567 88999999998888776431
Q ss_pred c---ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 81 Q---EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. .+|++||+|+.... .....+++|..+..++++++...+... +..+++++||...
T Consensus 113 ~~~g~id~li~~AG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~-~~g~iv~isS~~~ 181 (293)
T PRK05866 113 KRIGGVDILINNAGRSIRRPLAESLDRWHDVERTMVLNYYAPLRLIRGLAPGMLER-GDGHIINVATWGV 181 (293)
T ss_pred HHcCCCCEEEECCCCCCCcchhhccccHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCcEEEEECChhh
Confidence 1 38999999976421 123467889888777777654321001 3467888877543
No 161
>PRK06949 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-13 Score=112.17 Aligned_cols=164 Identities=13% Similarity=0.011 Sum_probs=108.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.++.|+++||||+|+||++++++|+ ..|++|+++.|++.... ....+++ ++.+|+++++++.+.++.
T Consensus 6 ~~~~k~ilItGasg~IG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~ 79 (258)
T PRK06949 6 NLEGKVALVTGASSGLGARFAQVLA-----QAGAKVVLASRRVERLKELRAEIEAEGGAAH-VVSLDVTDYQSIKAAVAH 79 (258)
T ss_pred CCCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHH
Confidence 4457999999999999999999999 68999999999765311 0124678 899999999888777765
Q ss_pred cc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-CC------CceEEEEeecCeeeec
Q 028258 79 IS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-RS------RLRHVALLTGTKHYMG 139 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~------~~~~~~~~s~~~~y~~ 139 (211)
+. ..+|++||+++... .++...+++|+.++.++.+++...+.. .. ...+++++||...+..
T Consensus 80 ~~~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~~ 159 (258)
T PRK06949 80 AETEAGTIDILVNNSGVSTTQKLVDVTPADFDFVFDTNTRGAFFVAQEVAKRMIARAKGAGNTKPGGRIINIASVAGLRV 159 (258)
T ss_pred HHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhcchhhHHHHHHHHHHHHhcCCcCCCCCCCeEEEEECcccccCC
Confidence 42 12799999998532 134556788998888888776532100 00 1246777766433210
Q ss_pred ccCCccccCCCCCCCCCCcCCCCCCCCCCcc----hhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 140 PIFDPSLAGQLMPYEVPFKEDSSRLPFPNFY----YELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 140 ~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~----~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
. +....| ...+.+... ...+++++++||+.++++..
T Consensus 160 -----------------~-------~~~~~Y~~sK~a~~~~~~~la~~~~~~~i~v~~v~pG~v~t~~~ 204 (258)
T PRK06949 160 -----------------L-------PQIGLYCMSKAAVVHMTRAMALEWGRHGINVNAICPGYIDTEIN 204 (258)
T ss_pred -----------------C-------CCccHHHHHHHHHHHHHHHHHHHHHhcCeEEEEEeeCCCcCCcc
Confidence 0 001112 112222211 23689999999999998754
No 162
>PRK07074 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.4e-13 Score=111.82 Aligned_cols=163 Identities=13% Similarity=0.027 Sum_probs=106.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLIS-- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-- 80 (211)
|.|++|||||||+||++++++|+ ++|++|++++|++.... .....++ ++.+|+.|++++...++.+.
T Consensus 1 ~~k~ilItGat~~iG~~la~~L~-----~~g~~v~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 74 (257)
T PRK07074 1 TKRTALVTGAAGGIGQALARRFL-----AAGDRVLALDIDAAALAAFADALGDARFV-PVACDLTDAASLAAALANAAAE 74 (257)
T ss_pred CCCEEEEECCcchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHH
Confidence 35789999999999999999999 68999999999765311 1224678 89999999998877776541
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
..+|+++|+++.... .+...+.+|..++.++++++...+. ..+..+|+++||...+.. ++
T Consensus 75 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~sS~~~~~~-------~~-- 144 (257)
T PRK07074 75 RGPVDVLVANAGAARAASLHDTTPASWRADNALNLEAAYLCVEAVLEGML-KRSRGAVVNIGSVNGMAA-------LG-- 144 (257)
T ss_pred cCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEcchhhcCC-------CC--
Confidence 127999999976421 1233457898888888887743210 013457888877432210 00
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+ .........+.+... ...++++..+||+.+.++.
T Consensus 145 ----------~~--~y~~sK~a~~~~~~~~a~~~~~~gi~v~~v~pg~v~t~~ 185 (257)
T PRK07074 145 ----------HP--AYSAAKAGLIHYTKLLAVEYGRFGIRANAVAPGTVKTQA 185 (257)
T ss_pred ----------Cc--ccHHHHHHHHHHHHHHHHHHhHhCeEEEEEEeCcCCcch
Confidence 11 001111222222222 2358999999999998874
No 163
>PRK06947 glucose-1-dehydrogenase; Provisional
Probab=99.54 E-value=1.1e-13 Score=111.74 Aligned_cols=122 Identities=13% Similarity=-0.015 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|++|||||+|+||+++++.|+ +.|++|+++.++. .... ....++. ++.+|++|++++.++++.+
T Consensus 1 m~k~ilItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 74 (248)
T PRK06947 1 MRKVVLITGASRGIGRATAVLAA-----ARGWSVGINYARDAAAAEETADAVRAAGGRAC-VVAGDVANEADVIAMFDAV 74 (248)
T ss_pred CCcEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEE-EEEeccCCHHHHHHHHHHH
Confidence 45799999999999999999999 6899988765443 2210 0124678 9999999998887777654
Q ss_pred c---cccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCC--CceEEEEeecCe
Q 028258 80 S---QEITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRS--RLRHVALLTGTK 135 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~--~~~~~~~~s~~~ 135 (211)
. ..+|++||+++.... ++...+.+|+.++..+++.+...+.... .-.+|+++||..
T Consensus 75 ~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~ii~~sS~~ 145 (248)
T PRK06947 75 QSAFGRLDALVNNAGIVAPSMPLADMDAARLRRMFDTNVLGAYLCAREAARRLSTDRGGRGGAIVNVSSIA 145 (248)
T ss_pred HHhcCCCCEEEECCccCCCCCChhhCCHHHHHHHHHhccHHHHHHHHHHHHHHHhcCCCCCcEEEEECchh
Confidence 2 138999999975321 2344578899988777755443210000 013577777643
No 164
>PRK12824 acetoacetyl-CoA reductase; Provisional
Probab=99.54 E-value=2.4e-13 Score=109.27 Aligned_cols=123 Identities=18% Similarity=0.173 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++||||+|+||++++++|+ +.|++|++++|++... . .....+. ++.+|++|.+.+.+.++.+
T Consensus 1 ~~k~vlItG~s~~iG~~la~~l~-----~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~ 74 (245)
T PRK12824 1 MKKIALVTGAKRGIGSAIARELL-----NDGYRVIATYFSGNDCAKDWFEEYGFTEDQVR-LKELDVTDTEECAEALAEI 74 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCcHHHHHHHHHHhhccCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 35789999999999999999999 6899999999874310 0 1124578 8999999999888877664
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+++... ..+...+++|+.++.++.+++...+. ..+..+|+++||...+
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~iss~~~~ 143 (245)
T PRK12824 75 EEEEGPVDILVNNAGITRDSVFKRMSHQEWNDVINTNLNSVFNVTQPLFAAMC-EQGYGRIINISSVNGL 143 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-HhCCeEEEEECChhhc
Confidence 21 3899999997632 13455678999988887555432210 0135688888875443
No 165
>PRK07063 short chain dehydrogenase; Provisional
Probab=99.54 E-value=1.3e-13 Score=112.23 Aligned_cols=122 Identities=16% Similarity=0.007 Sum_probs=89.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
..+|+++||||+|+||++++++|+ ++|++|++++|+++... . ...++. ++.+|++|++++..+++
T Consensus 5 l~~k~vlVtGas~gIG~~~a~~l~-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 78 (260)
T PRK07063 5 LAGKVALVTGAAQGIGAAIARAFA-----REGAAVALADLDAALAERAAAAIARDVAGARVL-AVPADVTDAASVAAAVA 78 (260)
T ss_pred cCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhccCCceEE-EEEccCCCHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0 124577 88999999988887776
Q ss_pred hccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.. .+|++||+++... .++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 79 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~ 147 (260)
T PRK07063 79 AAEEAFGPLDVLVNNAGINVFADPLAMTDEDWRRCFAVDLDGAWNGCRAVLPGMVER-GRGSIVNIASTH 147 (260)
T ss_pred HHHHHhCCCcEEEECCCcCCCCChhhCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhh-CCeEEEEECChh
Confidence 5421 3899999998532 1455667899999888888776432101 235788887753
No 166
>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed
Probab=99.54 E-value=1.5e-13 Score=110.37 Aligned_cols=124 Identities=15% Similarity=-0.019 Sum_probs=88.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.+++++++|||||+|+||++++++|+ ++|+.|+...|+..+.. ....+++ ++.+|++|.+++.+.++.+
T Consensus 1 ~~~~~~~~vlItGa~g~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 74 (245)
T PRK12936 1 MFDLSGRKALVTGASGGIGEEIARLLH-----AQGAIVGLHGTRVEKLEALAAELGERVK-IFPANLSDRDEVKALGQKA 74 (245)
T ss_pred CcCCCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHhCCceE-EEEccCCCHHHHHHHHHHH
Confidence 344456899999999999999999999 68999888887654311 0124577 8899999999887776543
Q ss_pred c---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 S---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. ..+|.+||+++... .++...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 75 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~ 140 (245)
T PRK12936 75 EADLEGVDILVNNAGITKDGLFVRMSDEDWDSVLEVNLTATFRLTRELTHPMM-RRRYGRIINITSV 140 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCccccCCHHHHHHHHhhccHHHHHHHHHHHHHHH-HhCCCEEEEECCH
Confidence 2 13899999998632 13455678999998888777643210 0134578888774
No 167
>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA. NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....
Probab=99.54 E-value=8.3e-15 Score=117.64 Aligned_cols=143 Identities=22% Similarity=0.305 Sum_probs=95.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
|+|+||||.+|+++++.|+ ..+++|+++.|++.+.. +...+++ ++.+|+.|++++.++|++ +|.||.
T Consensus 1 I~V~GatG~~G~~v~~~L~-----~~~~~V~~l~R~~~~~~~~~l~~~g~~-vv~~d~~~~~~l~~al~g----~d~v~~ 70 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALL-----SAGFSVRALVRDPSSDRAQQLQALGAE-VVEADYDDPESLVAALKG----VDAVFS 70 (233)
T ss_dssp EEEETTTSHHHHHHHHHHH-----HTTGCEEEEESSSHHHHHHHHHHTTTE-EEES-TT-HHHHHHHHTT----CSEEEE
T ss_pred CEEECCccHHHHHHHHHHH-----hCCCCcEEEEeccchhhhhhhhcccce-EeecccCCHHHHHHHHcC----CceEEe
Confidence 7999999999999999999 68899999999875311 1346788 999999999999999998 466776
Q ss_pred ecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCC-CC
Q 028258 89 VPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLP-FP 167 (211)
Q Consensus 89 ~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~-~~ 167 (211)
+........ .....+++++++++ ++++|++.|-...+ ++.....+ .+
T Consensus 71 ~~~~~~~~~-------~~~~~~li~Aa~~a-----gVk~~v~ss~~~~~--------------------~~~~~~~p~~~ 118 (233)
T PF05368_consen 71 VTPPSHPSE-------LEQQKNLIDAAKAA-----GVKHFVPSSFGADY--------------------DESSGSEPEIP 118 (233)
T ss_dssp ESSCSCCCH-------HHHHHHHHHHHHHH-----T-SEEEESEESSGT--------------------TTTTTSTTHHH
T ss_pred ecCcchhhh-------hhhhhhHHHhhhcc-----ccceEEEEEecccc--------------------cccccccccch
Confidence 665442211 22346899999988 69999875432111 11111111 11
Q ss_pred C--cchhHHHHHhhcCCCceEEEecCCceEecC
Q 028258 168 N--FYYELEDVSASYSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 168 ~--~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~ 198 (211)
. .....|+.+++ .+++|+++||+..+..-
T Consensus 119 ~~~~k~~ie~~l~~--~~i~~t~i~~g~f~e~~ 149 (233)
T PF05368_consen 119 HFDQKAEIEEYLRE--SGIPYTIIRPGFFMENL 149 (233)
T ss_dssp HHHHHHHHHHHHHH--CTSEBEEEEE-EEHHHH
T ss_pred hhhhhhhhhhhhhh--ccccceeccccchhhhh
Confidence 1 12334666654 69999999999877653
No 168
>PRK08226 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.6e-13 Score=110.49 Aligned_cols=123 Identities=14% Similarity=0.051 Sum_probs=88.2
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..+++|+++||||+|+||++++++|+ ++|++|++++|+..... .....+. ++.+|+++++++...++.
T Consensus 2 ~~~~~~~~lItG~s~giG~~la~~l~-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 75 (263)
T PRK08226 2 GKLTGKTALITGALQGIGEGIARVFA-----RHGANLILLDISPEIEKLADELCGRGHRCT-AVVADVRDPASVAAAIKR 75 (263)
T ss_pred CCCCCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEecCCHHHHHHHHHHHHhCCceE-EEECCCCCHHHHHHHHHH
Confidence 34456899999999999999999999 68999999998753110 0124577 889999999888777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|.+||+++.... .+.+.+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 76 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~ 142 (263)
T PRK08226 76 AKEKEGRIDILVNNAGVCRLGSFLDMSDEDRDFHIDINIKGVWNVTKAVLPEMI-ARKDGRIVMMSSV 142 (263)
T ss_pred HHHHcCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHH-hcCCcEEEEECcH
Confidence 421 38999999986321 2334678999999888887764310 0123567777664
No 169
>PRK08278 short chain dehydrogenase; Provisional
Probab=99.53 E-value=4.1e-13 Score=110.38 Aligned_cols=108 Identities=13% Similarity=-0.053 Sum_probs=82.5
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------------CCCCCceeEEEeeCCCHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------------FPTALVDRYITFDALDPT 70 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------------~~~~~~~~~i~~Dl~d~~ 70 (211)
+.+++|+++||||+|+||++++++|+ +.|++|++++|+..... ....++. ++.+|+++++
T Consensus 2 ~~~~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~-~~~~D~~~~~ 75 (273)
T PRK08278 2 MSLSGKTLFITGASRGIGLAIALRAA-----RDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQAL-PLVGDVRDED 75 (273)
T ss_pred CCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceE-EEEecCCCHH
Confidence 33456899999999999999999999 68999999999754210 0123577 8899999999
Q ss_pred HHHHHHHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++.+.++.+. ..+|++||+++.... .+...+++|+.++.++++++...
T Consensus 76 ~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~ 135 (273)
T PRK08278 76 QVAAAVAKAVERFGGIDICVNNASAINLTGTEDTPMKRFDLMQQINVRGTFLVSQACLPH 135 (273)
T ss_pred HHHHHHHHHHHHhCCCCEEEECCCCcCCCCcccCCHHHHHHHHHHhchHHHHHHHHHHHH
Confidence 8887776541 128999999986321 24456789999999999988754
No 170
>PRK06114 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.6e-13 Score=110.18 Aligned_cols=125 Identities=13% Similarity=-0.059 Sum_probs=89.3
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-----C--CCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-----F--PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-----~--~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|..+..|++|||||+|+||++++++|+ +.|++|++++|+.+.. . . ...++. .+.+|++|++++.+.
T Consensus 3 ~~~~~~k~~lVtG~s~gIG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~ 76 (254)
T PRK06114 3 LFDLDGQVAFVTGAGSGIGQRIAIGLA-----QAGADVALFDLRTDDGLAETAEHIEAAGRRAI-QIAADVTSKADLRAA 76 (254)
T ss_pred ccCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHH
Confidence 334457899999999999999999999 6899999999875421 0 0 124577 889999999988877
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|++||+++... .++...+++|+.++..+++++...+... +..+++++||..
T Consensus 77 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~ 147 (254)
T PRK06114 77 VARTEAELGALTLAVNAAGIANANPAEEMEEEQWQTVMDINLTGVFLSCQAEARAMLEN-GGGSIVNIASMS 147 (254)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChHhCCHHHHHHHHhhcchhhHHHHHHHHHHHHhc-CCcEEEEECchh
Confidence 765421 3799999998632 1345567899998877777664431101 235777777644
No 171
>PRK09730 putative NAD(P)-binding oxidoreductase; Provisional
Probab=99.53 E-value=1.6e-13 Score=110.47 Aligned_cols=165 Identities=12% Similarity=0.041 Sum_probs=104.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+++|||||+|+||++++++|+ ++|++|+++ .|++.... ....++. .+.+|++|++++.++++.+.
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~i~~~~~~~~~ 75 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLA-----QEGYTVAVNYQQNLHAAQEVVNLITQAGGKAF-VLQADISDENQVVAMFTAIDQ 75 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCChHHHHHHHHHHHhCCCeEE-EEEccCCCHHHHHHHHHHHHH
Confidence 689999999999999999999 689998875 45433210 0123577 89999999999988887653
Q ss_pred --cccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCC--CCCCceEEEEeecCeeeecccCCccc
Q 028258 81 --QEITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNS--GRSRLRHVALLTGTKHYMGPIFDPSL 146 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~~~~~~~s~~~~y~~~~~~~~~ 146 (211)
..+|+|||+++.... ++...+++|+.++.++++++...+. ...+-.+|+++||...+.+.
T Consensus 76 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~~v~~sS~~~~~~~------ 149 (247)
T PRK09730 76 HDEPLAALVNNAGILFTQCTVENLTAERINRVLSTNVTGYFLCCREAVKRMALKHGGSGGAIVNVSSAASRLGA------ 149 (247)
T ss_pred hCCCCCEEEECCCCCCCCCccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCCCcEEEEECchhhccCC------
Confidence 137899999986321 2345678899988777766544310 01112457888775433210
Q ss_pred cCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 147 AGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 147 ~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
| .+..+ ........+.++.. ...+++++++||+.++++..
T Consensus 150 ---------~-~~~~~---Y~~sK~~~~~~~~~l~~~~~~~~i~v~~i~pg~~~~~~~ 194 (247)
T PRK09730 150 ---------P-GEYVD---YAASKGAIDTLTTGLSLEVAAQGIRVNCVRPGFIYTEMH 194 (247)
T ss_pred ---------C-Ccccc---hHhHHHHHHHHHHHHHHHHHHhCeEEEEEEeCCCcCccc
Confidence 0 00000 00111222222221 34689999999999999853
No 172
>PRK08589 short chain dehydrogenase; Validated
Probab=99.53 E-value=2.5e-13 Score=111.54 Aligned_cols=125 Identities=13% Similarity=-0.055 Sum_probs=87.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|..+.+|++|||||+|+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++..+++
T Consensus 1 m~~l~~k~vlItGas~gIG~aia~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 74 (272)
T PRK08589 1 MKRLENKVAVITGASTGIGQASAIALA-----QEGAYVLAVDIAEAVSETVDKIKSNGGKAK-AYHVDISDEQQVKDFAS 74 (272)
T ss_pred CCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCcHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHH
Confidence 334456899999999999999999999 68999999999822110 0123578 89999999988877776
Q ss_pred hccc---ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 78 LISQ---EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+.. .+|++||+++.... .+...+++|+.++..+++++...+... + .+++++||...
T Consensus 75 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~-g~iv~isS~~~ 144 (272)
T PRK08589 75 EIKEQFGRVDVLFNNAGVDNAAGRIHEYPVDVFDKIMAVDMRGTFLMTKMLLPLMMEQ-G-GSIINTSSFSG 144 (272)
T ss_pred HHHHHcCCcCEEEECCCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-C-CEEEEeCchhh
Confidence 5431 38999999976321 234566789888777766655432101 2 47888877543
No 173
>PRK07814 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.7e-13 Score=110.71 Aligned_cols=121 Identities=16% Similarity=-0.011 Sum_probs=89.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|+++++++.++++.+.
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 82 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFA-----EAGADVLIAARTESQLDEVAEQIRAAGRRAH-VVAADLAHPEATAGLAGQAV 82 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764311 0124678 89999999998877776541
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|+|||+|+... .++...+.+|+.++.++.+++...+....+..+++++||.
T Consensus 83 ~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~sS~ 148 (263)
T PRK07814 83 EAFGRLDIVVNNVGGTMPNPLLSTSTKDLADAFTFNVATAHALTVAAVPLMLEHSGGGSVINISST 148 (263)
T ss_pred HHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhhcHHHHHHHHHHHHHHHhhcCCeEEEEEccc
Confidence 1 2899999997522 1345577999999999999887532100134577777764
No 174
>PRK06057 short chain dehydrogenase; Provisional
Probab=99.53 E-value=1.3e-13 Score=111.99 Aligned_cols=121 Identities=13% Similarity=-0.037 Sum_probs=84.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
+++|+++||||||+||++++++|+ ++|++|++++|++.... ......+ ++.+|++|++++.+.++.+. .
T Consensus 5 ~~~~~vlItGasggIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 78 (255)
T PRK06057 5 LAGRVAVITGGGSGIGLATARRLA-----AEGATVVVGDIDPEAGKAAADEVGGL-FVPTDVTDEDAVNALFDTAAETYG 78 (255)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHcCCc-EEEeeCCCHHHHHHHHHHHHHHcC
Confidence 346899999999999999999999 68999999999765321 0111236 88999999998888777542 1
Q ss_pred ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+++.... .+...+++|+.++.++++.+...+... +..+++++||.
T Consensus 79 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~-~~g~iv~~sS~ 141 (255)
T PRK06057 79 SVDIAFNNAGISPPEDDSILNTGLDAWQRVQDVNLTSVYLCCKAALPHMVRQ-GKGSIINTASF 141 (255)
T ss_pred CCCEEEECCCcCCCCCCCcccCCHHHHHHHHHHhcHHHHHHHHHHHHHHHHh-CCcEEEEEcch
Confidence 27999999975321 244567889888777776654321001 23467776663
No 175
>PRK12747 short chain dehydrogenase; Provisional
Probab=99.53 E-value=2.8e-13 Score=109.70 Aligned_cols=162 Identities=10% Similarity=-0.048 Sum_probs=104.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC-CCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR-RPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R-~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+++||||+|+||++++++|+ +.|++|+++.+ +..... .....+. .+.+|+++.+++...++.+
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLA-----NDGALVAIHYGNRKEEAEETVYEIQSNGGSAF-SIGANLESLHGVEALYSSL 76 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHHHhcCCceE-EEecccCCHHHHHHHHHHH
Confidence 46899999999999999999999 69999987754 322210 0123466 7889999998776555432
Q ss_pred c---------cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeeccc
Q 028258 80 S---------QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPI 141 (211)
Q Consensus 80 ~---------~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~ 141 (211)
. ..+|.+||+|+.... .+...+++|+.++..+++++...+. .-.+|+++||...+..
T Consensus 77 ~~~~~~~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~iv~isS~~~~~~-- 151 (252)
T PRK12747 77 DNELQNRTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLR---DNSRIINISSAATRIS-- 151 (252)
T ss_pred HHHhhhhcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhh---cCCeEEEECCcccccC--
Confidence 1 138999999985321 2456678999999999887776521 1247888887543321
Q ss_pred CCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 142 FDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 142 ~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.....+ ....+.+.+.+.+. ...++.+..+.|+.+.++-
T Consensus 152 ---------------~~~~~~---Y~~sKaa~~~~~~~la~e~~~~girvn~v~Pg~v~t~~ 195 (252)
T PRK12747 152 ---------------LPDFIA---YSMTKGAINTMTFTLAKQLGARGITVNAILPGFIKTDM 195 (252)
T ss_pred ---------------CCCchh---HHHHHHHHHHHHHHHHHHHhHcCCEEEEEecCCccCch
Confidence 000000 00111222222221 3568999999999998764
No 176
>PRK09134 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.6e-13 Score=108.89 Aligned_cols=109 Identities=15% Similarity=0.020 Sum_probs=82.2
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
|.+.++|++|||||+|+||++++++|+ +.|++|+++.|+... .. .....++ ++.+|++|.+++.++
T Consensus 4 ~~~~~~k~vlItGas~giG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~~~~~ 77 (258)
T PRK09134 4 MSMAAPRAALVTGAARRIGRAIALDLA-----AHGFDVAVHYNRSRDEAEALAAEIRALGRRAV-ALQADLADEAEVRAL 77 (258)
T ss_pred CcCCCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHH
Confidence 334467899999999999999999999 689999887775321 10 0134578 899999999988887
Q ss_pred HHhcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++.+. ..+|+|||+++.... .+...+++|+.++.++++++...
T Consensus 78 ~~~~~~~~~~iD~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~ 132 (258)
T PRK09134 78 VARASAALGPITLLVNNASLFEYDSAASFTRASWDRHMATNLRAPFVLAQAFARA 132 (258)
T ss_pred HHHHHHHcCCCCEEEECCcCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHH
Confidence 76542 138999999975321 34557799999999999887764
No 177
>PRK07904 short chain dehydrogenase; Provisional
Probab=99.52 E-value=5.6e-13 Score=108.49 Aligned_cols=116 Identities=17% Similarity=0.130 Sum_probs=81.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC-CC-------C-CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP-GW-------F-PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~-~~-------~-~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+++|||||||+||++++++|+ ++ |++|++++|++++ .. . ...+++ ++.+|++|++++.+.++.
T Consensus 8 ~~~vlItGas~giG~~la~~l~-----~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~-~~~~D~~~~~~~~~~~~~ 81 (253)
T PRK07904 8 PQTILLLGGTSEIGLAICERYL-----KNAPARVVLAALPDDPRRDAAVAQMKAAGASSVE-VIDFDALDTDSHPKVIDA 81 (253)
T ss_pred CcEEEEEcCCcHHHHHHHHHHH-----hcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceE-EEEecCCChHHHHHHHHH
Confidence 5789999999999999999999 45 5999999998764 10 0 113678 999999999876665553
Q ss_pred cc--cccceEEeecccCCc------hh---HHHHhhcHHHHHH----HHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 IS--QEITNLFWVPLQVQE------SE---EVNIFKNSTMLKN----VLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~--~~~~~v~~~a~~~~~------~~---~~~~~~n~~~~~~----l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+. ..+|.+|++++.... ++ .+.+++|+.++.. +++.+.+. +..+|+++||..
T Consensus 82 ~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~l~~~~~~~-----~~~~iv~isS~~ 148 (253)
T PRK07904 82 AFAGGDVDVAIVAFGLLGDAEELWQNQRKAVQIAEINYTAAVSVGVLLGEKMRAQ-----GFGQIIAMSSVA 148 (253)
T ss_pred HHhcCCCCEEEEeeecCCchhhcccCHHHHHHHHHHHhHhHHHHHHHHHHHHHhc-----CCceEEEEechh
Confidence 31 138999988876432 11 1346888877665 45555543 346888888753
No 178
>PRK08277 D-mannonate oxidoreductase; Provisional
Probab=99.52 E-value=3.2e-13 Score=111.03 Aligned_cols=166 Identities=14% Similarity=0.040 Sum_probs=106.6
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+.+|+++||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|++++...++.
T Consensus 7 ~~~~k~vlVtGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~ 80 (278)
T PRK08277 7 SLKGKVAVITGGGGVLGGAMAKELA-----RAGAKVAILDRNQEKAEAVVAEIKAAGGEAL-AVKADVLDKESLEQARQQ 80 (278)
T ss_pred ccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 3346899999999999999999999 68999999999754210 0123577 889999999888777665
Q ss_pred ccc---ccceEEeecccCC------------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEe
Q 028258 79 ISQ---EITNLFWVPLQVQ------------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALL 131 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~------------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~ 131 (211)
+.. .+|++||+++... .++...+++|+.++..+++++...+... +..+|+++
T Consensus 81 ~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~ii~i 159 (278)
T PRK08277 81 ILEDFGPCDILINGAGGNHPKATTDNEFHELIEPTKTFFDLDEEGFEFVFDLNLLGTLLPTQVFAKDMVGR-KGGNIINI 159 (278)
T ss_pred HHHHcCCCCEEEECCCCCCcccccccccccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCcEEEEE
Confidence 321 3899999987421 1344567889888776665554321001 23578888
Q ss_pred ecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 132 TGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 132 s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
||...|.. ... .+ .....+.+.+.+.+. ...++++..++|+.+..+.
T Consensus 160 sS~~~~~~-----------------~~~-~~--~Y~~sK~a~~~l~~~la~e~~~~girvn~v~Pg~v~t~~ 211 (278)
T PRK08277 160 SSMNAFTP-----------------LTK-VP--AYSAAKAAISNFTQWLAVHFAKVGIRVNAIAPGFFLTEQ 211 (278)
T ss_pred ccchhcCC-----------------CCC-Cc--hhHHHHHHHHHHHHHHHHHhCccCeEEEEEEeccCcCcc
Confidence 87554421 000 00 000111222222222 3468999999999998774
No 179
>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.52 E-value=2e-13 Score=109.72 Aligned_cols=122 Identities=16% Similarity=-0.021 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|++|||||||+||++++++|+ +.|++|+++ +|++.... .....+. ++.+|++|++++.+.++.
T Consensus 3 ~~~~~ilI~Gasg~iG~~la~~l~-----~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 76 (247)
T PRK05565 3 LMGKVAIVTGASGGIGRAIAELLA-----KEGAKVVIAYDINEEAAQELLEEIKEEGGDAI-AVKADVSSEEDVENLVEQ 76 (247)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 345899999999999999999999 689999988 88654310 0124577 889999999988777765
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.. .+|.|||+++.... .+...+++|..++.++++.+...+. ..+..+++++||..
T Consensus 77 ~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~ 144 (247)
T PRK05565 77 IVEKFGKIDILVNNAGISNFGLVTDMTDEEWDRVIDVNLTGVMLLTRYALPYMI-KRKSGVIVNISSIW 144 (247)
T ss_pred HHHHhCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECCHh
Confidence 421 38999999976421 2345678899998888777764310 01245678877743
No 180
>PRK06841 short chain dehydrogenase; Provisional
Probab=99.52 E-value=3e-13 Score=109.60 Aligned_cols=122 Identities=12% Similarity=-0.038 Sum_probs=89.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
...|++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|+++++++.+.++.+..
T Consensus 13 ~~~k~vlItGas~~IG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~ 86 (255)
T PRK06841 13 LSGKVAVVTGGASGIGHAIAELFA-----AKGARVALLDRSEDVAEVAAQLLGGNAK-GLVCDVSDSQSVEAAVAAVISA 86 (255)
T ss_pred CCCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764211 1224567 889999999988877765421
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.+||+++.... ++...+++|+.++.++++++...+... +..+|+++||..
T Consensus 87 ~~~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~ 150 (255)
T PRK06841 87 FGRIDILVNSAGVALLAPAEDVSEEDWDKTIDINLKGSFLMAQAVGRHMIAA-GGGKIVNLASQA 150 (255)
T ss_pred hCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhcHHHHHHHHHHHHHHHhc-CCceEEEEcchh
Confidence 27999999986421 334567899999999888876532101 246788887743
No 181
>PRK08339 short chain dehydrogenase; Provisional
Probab=99.52 E-value=4.7e-13 Score=109.48 Aligned_cols=127 Identities=17% Similarity=0.053 Sum_probs=89.6
Q ss_pred CccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|.+|. +++|++|||||+|+||++++++|+ ++|++|++++|+..+.. ....++. ++.+|++|++++
T Consensus 1 ~~~~~-l~~k~~lItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i 73 (263)
T PRK08339 1 MLKID-LSGKLAFTTASSKGIGFGVARVLA-----RAGADVILLSRNEENLKKAREKIKSESNVDVS-YIVADLTKREDL 73 (263)
T ss_pred CCccC-CCCCEEEEeCCCCcHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHH
Confidence 44553 346899999999999999999999 68999999999754311 0124678 899999999988
Q ss_pred HHHHHhcc--cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 73 ALKLSLIS--QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 73 ~~~~~~~~--~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+.++.+. ..+|+++|+++... .++...+++|+.+...+++++...+... +..+++++||..
T Consensus 74 ~~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~-~~g~Ii~isS~~ 146 (263)
T PRK08339 74 ERTVKELKNIGEPDIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERK-GFGRIIYSTSVA 146 (263)
T ss_pred HHHHHHHHhhCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHc-CCCEEEEEcCcc
Confidence 77776542 13899999987532 2455677889877666555554332101 235788888754
No 182
>PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.51 E-value=6.1e-13 Score=106.49 Aligned_cols=117 Identities=15% Similarity=0.130 Sum_probs=85.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.|+++||||+|+||++++++|+ ++|++|++++|++... ...++. ++.+|++++ +++.++.... +|++|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~--~~~~~~-~~~~D~~~~--~~~~~~~~~~-id~lv 72 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFL-----AQGAQVYGVDKQDKPD--LSGNFH-FLQLDLSDD--LEPLFDWVPS-VDILC 72 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHH-----HCCCEEEEEeCCcccc--cCCcEE-EEECChHHH--HHHHHHhhCC-CCEEE
Confidence 45899999999999999999999 6899999999976542 134678 899999987 5555555543 89999
Q ss_pred eecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 88 WVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 88 ~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
|+++... .++...+++|+.++.++++++...+... +..+|+++||...
T Consensus 73 ~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~~sS~~~ 130 (235)
T PRK06550 73 NTAGILDDYKPLLDTSLEEWQHIFDTNLTSTFLLTRAYLPQMLER-KSGIIINMCSIAS 130 (235)
T ss_pred ECCCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhc-CCcEEEEEcChhh
Confidence 9997421 1345568899999988888876431001 2357888877543
No 183
>PRK12937 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.4e-13 Score=107.32 Aligned_cols=118 Identities=14% Similarity=0.036 Sum_probs=86.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||+|+||++++++|+ ++|++|+++.|+.... .....++. ++.+|++|++++.+.++.+
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~-----~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~ 77 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLA-----ADGFAVAVNYAGSAAAADELVAEIEAAGGRAI-AVQADVADAAAVTRLFDAA 77 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEecCCCHHHHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHH
Confidence 45899999999999999999999 6899988877754320 01134678 8999999999888887754
Q ss_pred cc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+++... .++...+++|+.++.++++++.+.+ ..-.+++++||.
T Consensus 78 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~~~iv~~ss~ 141 (245)
T PRK12937 78 ETAFGRIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHL---GQGGRIINLSTS 141 (245)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHh---ccCcEEEEEeec
Confidence 21 2899999998632 1344567899999989888876542 112467777764
No 184
>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional
Probab=99.51 E-value=2.7e-13 Score=110.60 Aligned_cols=125 Identities=11% Similarity=-0.093 Sum_probs=89.3
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++++|+++||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 2 ~~~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 75 (263)
T PRK06200 2 GWLHGQVALITGGGSGIGRALVERFL-----AEGARVAVLERSAEKLASLRQRFGDHVL-VVEGDVTSYADNQRAVDQTV 75 (263)
T ss_pred CCCCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcce-EEEccCCCHHHHHHHHHHHH
Confidence 34456899999999999999999999 68999999999764321 0124577 89999999988877776542
Q ss_pred ---cccceEEeecccCC---c----h-------hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 ---QEITNLFWVPLQVQ---E----S-------EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~---~----~-------~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|.+||+++... . + +...+++|+.++..+++++...+.. .-.++++++|...+
T Consensus 76 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~--~~g~iv~~sS~~~~ 147 (263)
T PRK06200 76 DAFGKLDCFVGNAGIWDYNTSLVDIPAETLDTAFDEIFNVNVKGYLLGAKAALPALKA--SGGSMIFTLSNSSF 147 (263)
T ss_pred HhcCCCCEEEECCCCcccCCCcccCChhHHHHHHHHHeeeccHhHHHHHHHHHHHHHh--cCCEEEEECChhhc
Confidence 13899999998531 0 1 3445688999888888877654210 11467777775443
No 185
>PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated
Probab=99.51 E-value=4.6e-13 Score=108.71 Aligned_cols=125 Identities=11% Similarity=-0.026 Sum_probs=89.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..+|++|||||+|+||++++++|+ +.|++|++++|+..... .....+. ++.+|++|.+++.+.++.+..
T Consensus 8 l~~k~~lItG~~~gIG~a~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~ 81 (253)
T PRK08993 8 LEGKVAVVTGCDTGLGQGMALGLA-----EAGCDIVGINIVEPTETIEQVTALGRRFL-SLTADLRKIDGIPALLERAVA 81 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEecCcchHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHHHHH
Confidence 346899999999999999999999 68999998877543210 0124567 889999999888877765421
Q ss_pred ---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++||+|+... .++...+++|+.++.++++++...+.....-.+++++||...+
T Consensus 82 ~~~~~D~li~~Ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~g~iv~isS~~~~ 149 (253)
T PRK08993 82 EFGHIDILVNNAGLIRREDAIEFSEKDWDDVMNLNIKSVFFMSQAAAKHFIAQGNGGKIINIASMLSF 149 (253)
T ss_pred HhCCCCEEEECCCCCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEECchhhc
Confidence 3899999998632 2455678999999988888776542101112467888776544
No 186
>PRK05650 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.9e-13 Score=109.53 Aligned_cols=120 Identities=12% Similarity=0.005 Sum_probs=84.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
|+++||||||+||++++++|+ +.|++|++++|+..... .....+. ++.+|++|++++.+.++.+..
T Consensus 1 ~~vlVtGasggIG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~i~~~ 74 (270)
T PRK05650 1 NRVMITGAASGLGRAIALRWA-----REGWRLALADVNEEGGEETLKLLREAGGDGF-YQRCDVRDYSQLTALAQACEEK 74 (270)
T ss_pred CEEEEecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHHH
Confidence 479999999999999999999 68999999998765311 1134677 899999999888777764321
Q ss_pred --ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 82 --EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 82 --~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+|++||+++.... ++...+++|+.++.++.+.+...+. ..+..+|+++||...
T Consensus 75 ~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~vsS~~~ 139 (270)
T PRK05650 75 WGGIDVIVNNAGVASGGFFEELSLEDWDWQIAINLMGVVKGCKAFLPLFK-RQKSGRIVNIASMAG 139 (270)
T ss_pred cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEECChhh
Confidence 38999999986321 2344568898777666665432210 013567888877543
No 187
>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional
Probab=99.51 E-value=5.6e-13 Score=108.40 Aligned_cols=124 Identities=11% Similarity=0.022 Sum_probs=88.6
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.++|++|||||+|+||++++++|+ +.|++|+++.|+..... .....++ ++.+|++|.+++...++.+.
T Consensus 13 l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 86 (258)
T PRK06935 13 LDGKVAIVTGGNTGLGQGYAVALA-----KAGADIIITTHGTNWDETRRLIEKEGRKVT-FVQVDLTKPESAEKVVKEAL 86 (258)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCcHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 356899999999999999999999 68999999988732110 0134678 99999999998877776542
Q ss_pred c---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++... .++...+++|+.++.++.+++...+... +..+++++||...+
T Consensus 87 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~~~ 154 (258)
T PRK06935 87 EEFGKIDILVNNAGTIRRAPLLEYKDEDWNAVMDINLNSVYHLSQAVAKVMAKQ-GSGKIINIASMLSF 154 (258)
T ss_pred HHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhCHHHHHHHHHHHHHHHhc-CCeEEEEECCHHhc
Confidence 1 2899999998632 1344567889888777776665432101 23578888775443
No 188
>PRK06172 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4.7e-13 Score=108.41 Aligned_cols=123 Identities=12% Similarity=-0.040 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
..|+++||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|.+++.+.++.+.
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 79 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFA-----REGAKVVVADRDAAGGEETVALIREAGGEAL-FVACDVTRDAEVKALVEQTI 79 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999765311 1134678 89999999998887776542
Q ss_pred ---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 ---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
..+|++||+++... .++.+.+++|+.++..+++++...+. ..+..+++++||...+
T Consensus 80 ~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~ii~~sS~~~~ 148 (253)
T PRK06172 80 AAYGRLDYAFNNAGIEIEQGRLAEGSEAEFDAIMGVNVKGVWLCMKYQIPLML-AQGGGAIVNTASVAGL 148 (253)
T ss_pred HHhCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCcEEEEECchhhc
Confidence 12799999997531 13445678899888776665443210 0123577888775444
No 189
>PRK05867 short chain dehydrogenase; Provisional
Probab=99.51 E-value=4e-13 Score=108.96 Aligned_cols=124 Identities=14% Similarity=-0.086 Sum_probs=88.4
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+..+|++|||||+|+||++++++|+ +.|++|++++|+..... ....++. .+.+|++|++++.++++
T Consensus 5 ~~~~~k~vlVtGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~ 78 (253)
T PRK05867 5 FDLHGKRALITGASTGIGKRVALAYV-----EAGAQVAIAARHLDALEKLADEIGTSGGKVV-PVCCDVSQHQQVTSMLD 78 (253)
T ss_pred ccCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCeEE-EEEccCCCHHHHHHHHH
Confidence 34457899999999999999999999 68999999999754311 0124577 88999999998888776
Q ss_pred hccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|++||+++.... .+...+++|+.++..+++++...+.....-.+++++||.
T Consensus 79 ~~~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~g~iv~~sS~ 147 (253)
T PRK05867 79 QVTAELGGIDIAVCNAGIITVTPMLDMPLEEFQRLQNTNVTGVFLTAQAAAKAMVKQGQGGVIINTASM 147 (253)
T ss_pred HHHHHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHhcchhHHHHHHHHHHHHHhcCCCcEEEEECcH
Confidence 5421 38999999986321 344567899999888888776432101111356666653
No 190
>PRK06953 short chain dehydrogenase; Provisional
Probab=99.51 E-value=5.4e-13 Score=106.20 Aligned_cols=117 Identities=16% Similarity=0.193 Sum_probs=86.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQ-EITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v~ 87 (211)
++++||||+|+||++++++|+ +.|++|++++|+++... ....+++ ++.+|++|.+.+.+.+..+.. .+|++|
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~-----~~G~~v~~~~r~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~d~vi 75 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYR-----ADGWRVIATARDAAALAALQALGAE-ALALDVADPASVAGLAWKLDGEALDAAV 75 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHH-----hCCCEEEEEECCHHHHHHHHhccce-EEEecCCCHHHHHHHHHHhcCCCCCEEE
Confidence 689999999999999999999 68999999999865321 1224567 899999999988887655432 389999
Q ss_pred eecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 88 WVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 88 ~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|+++... .++...+++|+.++.++++++...+. . .-.++++++|.
T Consensus 76 ~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~-~~g~iv~isS~ 131 (222)
T PRK06953 76 YVAGVYGPRTEGVEPITREDFDAVMHTNVLGPMQLLPILLPLVE-A-AGGVLAVLSSR 131 (222)
T ss_pred ECCCcccCCCCCcccCCHHHHHHHHhhhhhhHHHHHHHHHHhhh-c-cCCeEEEEcCc
Confidence 9987631 13456789999999999988876421 0 11356666654
No 191
>PRK09242 tropinone reductase; Provisional
Probab=99.51 E-value=6.1e-13 Score=108.06 Aligned_cols=168 Identities=14% Similarity=0.001 Sum_probs=110.5
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.....|++|||||+|+||++++++|+ ++|++|++++|+.+... .....+. ++.+|+++++++.+.
T Consensus 5 ~~~~~k~~lItGa~~gIG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~ 78 (257)
T PRK09242 5 WRLDGQTALITGASKGIGLAIAREFL-----GLGADVLIVARDADALAQARDELAEEFPEREVH-GLAADVSDDEDRRAI 78 (257)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEE-EEECCCCCHHHHHHH
Confidence 34457899999999999999999999 68999999999764310 0124567 889999999888777
Q ss_pred HHhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCC
Q 028258 76 LSLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFD 143 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~ 143 (211)
++.+.. .+|++||+++... .++...+.+|+.++.++++++...+... +..+++++||...+...
T Consensus 79 ~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~ii~~sS~~~~~~~--- 154 (257)
T PRK09242 79 LDWVEDHWDGLHILVNNAGGNIRKAAIDYTEDEWRGIFETNLFSAFELSRYAHPLLKQH-ASSAIVNIGSVSGLTHV--- 154 (257)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCceEEEECccccCCCC---
Confidence 765421 3899999998621 1345567899999888888775432101 23678888775433210
Q ss_pred ccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecCC
Q 028258 144 PSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 144 ~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~~ 199 (211)
....+ ........+.+.+. ...++++..++|+.+..+..
T Consensus 155 --------------~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~Pg~i~t~~~ 198 (257)
T PRK09242 155 --------------RSGAP---YGMTKAALLQMTRNLAVEWAEDGIRVNAVAPWYIRTPLT 198 (257)
T ss_pred --------------CCCcc---hHHHHHHHHHHHHHHHHHHHHhCeEEEEEEECCCCCccc
Confidence 00000 00111122222221 34689999999999987653
No 192
>PRK07035 short chain dehydrogenase; Provisional
Probab=99.50 E-value=4.8e-13 Score=108.27 Aligned_cols=124 Identities=9% Similarity=-0.064 Sum_probs=87.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+..+++|++|||||+|+||++++++|+ +.|++|++++|+..... .....++ ++.+|++|.+++.+.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~l~~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~ 76 (252)
T PRK07035 3 LFDLTGKIALVTGASRGIGEAIAKLLA-----QQGAHVIVSSRKLDGCQAVADAIVAAGGKAE-ALACHIGEMEQIDALF 76 (252)
T ss_pred ccccCCCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHH
Confidence 334557899999999999999999999 68999999999754311 0123567 8899999998887776
Q ss_pred Hhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 77 SLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.. .+|+++|+++... ..+...+++|+.++..+++++...+. ..+..+++++||.
T Consensus 77 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~sS~ 146 (252)
T PRK07035 77 AHIRERHGRLDILVNNAAANPYFGHILDTDLGAFQKTVDVNIRGYFFMSVEAGKLMK-EQGGGSIVNVASV 146 (252)
T ss_pred HHHHHHcCCCCEEEECCCcCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hCCCcEEEEECch
Confidence 65421 2899999997421 12445678899888877766643311 1134577777764
No 193
>PRK07023 short chain dehydrogenase; Provisional
Probab=99.50 E-value=7e-13 Score=106.85 Aligned_cols=120 Identities=18% Similarity=0.116 Sum_probs=85.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHh-c----c--c
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSL-I----S--Q 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~-~----~--~ 81 (211)
++|||||||+||++++++|+ +.|++|++++|+..+.. ....++. ++.+|++|.+++.+.+.+ + . .
T Consensus 3 ~vlItGasggiG~~ia~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~~~~ 76 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLL-----QPGIAVLGVARSRHPSLAAAAGERLA-EVELDLSDAAAAAAWLAGDLLAAFVDGA 76 (243)
T ss_pred eEEEecCCcchHHHHHHHHH-----hCCCEEEEEecCcchhhhhccCCeEE-EEEeccCCHHHHHHHHHHHHHHHhccCC
Confidence 79999999999999999999 68999999999765321 1234678 899999999988775543 1 1 1
Q ss_pred ccceEEeecccCCc----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 EITNLFWVPLQVQE----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ~~~~v~~~a~~~~~----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.++++||+++.... .+...+++|+.++..+.+.+...+. .....+++++||...+
T Consensus 77 ~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~isS~~~~ 141 (243)
T PRK07023 77 SRVLLINNAGTVEPIGPLATLDAAAIARAVGLNVAAPLMLTAALAQAAS-DAAERRILHISSGAAR 141 (243)
T ss_pred CceEEEEcCcccCCCCccccCCHHHHHHHeeeeehHHHHHHHHHHHHhh-ccCCCEEEEEeChhhc
Confidence 27889999876321 2345678899987776666654321 0124578888875433
No 194
>PRK08703 short chain dehydrogenase; Provisional
Probab=99.50 E-value=1.1e-12 Score=105.54 Aligned_cols=121 Identities=12% Similarity=-0.030 Sum_probs=81.7
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCH--HHHHHH
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDP--TDTALK 75 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~--~~~~~~ 75 (211)
.+.+|+++||||+|+||++++++|+ ++|++|++++|++.... .....+. .+.+|+++. +++.+.
T Consensus 3 ~l~~k~vlItG~sggiG~~la~~l~-----~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~ 76 (239)
T PRK08703 3 TLSDKTILVTGASQGLGEQVAKAYA-----AAGATVILVARHQKKLEKVYDAIVEAGHPEPF-AIRFDLMSAEEKEFEQF 76 (239)
T ss_pred CCCCCEEEEECCCCcHHHHHHHHHH-----HcCCEEEEEeCChHHHHHHHHHHHHcCCCCcc-eEEeeecccchHHHHHH
Confidence 3445899999999999999999999 68999999999875311 0123466 788999763 344443
Q ss_pred HH----hcccccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 76 LS----LISQEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 76 ~~----~~~~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
++ ..+..+|+|||+++... .++...+++|+.++.++++++...+... +..+++++++
T Consensus 77 ~~~i~~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~~ss 147 (239)
T PRK08703 77 AATIAEATQGKLDGIVHCAGYFYALSPLDFQTVAEWVNQYRINTVAPMGLTRALFPLLKQS-PDASVIFVGE 147 (239)
T ss_pred HHHHHHHhCCCCCEEEEeccccccCCCccccCHHHHHHHHHHhhhHHHHHHHHHHHHHHhC-CCCEEEEEec
Confidence 32 22113799999998531 1234467899999888888776542101 2346677665
No 195
>PRK08177 short chain dehydrogenase; Provisional
Probab=99.50 E-value=8.1e-13 Score=105.40 Aligned_cols=116 Identities=20% Similarity=0.186 Sum_probs=85.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc-ccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ-EITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-~~~~v 86 (211)
|+++||||+|++|++++++|+ +.|++|++++|++.... ....++. ++.+|++|++++.+.++.+.. .+|+|
T Consensus 2 k~vlItG~sg~iG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~~~id~v 75 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLL-----ERGWQVTATVRGPQQDTALQALPGVH-IEKLDMNDPASLDQLLQRLQGQRFDLL 75 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----hCCCEEEEEeCCCcchHHHHhccccc-eEEcCCCCHHHHHHHHHHhhcCCCCEE
Confidence 789999999999999999999 68999999999876431 1124677 889999999988887776532 38999
Q ss_pred EeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 87 FWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 87 ~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
||+++.... ++...+.+|..++..+.+++...+. .+-..++++||
T Consensus 76 i~~ag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~--~~~~~iv~~ss 131 (225)
T PRK08177 76 FVNAGISGPAHQSAADATAAEIGQLFLTNAIAPIRLARRLLGQVR--PGQGVLAFMSS 131 (225)
T ss_pred EEcCcccCCCCCCcccCCHHHHhhheeeeeeHHHHHHHHHHHhhh--hcCCEEEEEcc
Confidence 999876321 2334567888888888887765421 11135566655
No 196
>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.50 E-value=5e-13 Score=108.01 Aligned_cols=120 Identities=11% Similarity=0.035 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC----CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW----FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
++|++|||||+|+||+++++.|+ ++|++|+++.|+... .. ....++. ++.+|++|++++.++++.+..
T Consensus 4 ~~k~ilItGas~gIG~~la~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~ 77 (253)
T PRK08642 4 SEQTVLVTGGSRGLGAAIARAFA-----REGARVVVNYHQSEDAAEALADELGDRAI-ALQADVTDREQVQAMFATATEH 77 (253)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHH-----HCCCeEEEEcCCCHHHHHHHHHHhCCceE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 45899999999999999999999 689999877654321 10 0124677 889999999988887766421
Q ss_pred ---ccceEEeecccC--------C-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 ---EITNLFWVPLQV--------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 ---~~~~v~~~a~~~--------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|.+||+++.. . ..+.+.+++|+.++.++++++...+. ..+..+++++||.
T Consensus 78 ~g~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~g~iv~iss~ 147 (253)
T PRK08642 78 FGKPITTVVNNALADFSFDGDARKKADDITWEDFQQQLEGSVKGALNTIQAALPGMR-EQGFGRIINIGTN 147 (253)
T ss_pred hCCCCeEEEECCCccccccccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHHHH-hcCCeEEEEECCc
Confidence 279999998642 0 12345678999999999888764320 0123577777663
No 197
>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.50 E-value=4.5e-13 Score=108.05 Aligned_cols=165 Identities=12% Similarity=-0.054 Sum_probs=105.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.++++|||||+|+||+++++.|+ ++|++|++++|++.+.. ....++. ++.+|++|++++.+.++.+
T Consensus 3 ~~~~~~lItG~~g~iG~~~a~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 76 (253)
T PRK08217 3 LKDKVIVITGGAQGLGRAMAEYLA-----QKGAKLALIDLNQEKLEEAVAECGALGTEVR-GYAANVTDEEDVEATFAQI 76 (253)
T ss_pred CCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999764310 1134677 8999999998887777654
Q ss_pred c---cccceEEeecccCC------------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 80 S---QEITNLFWVPLQVQ------------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~------------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
. ..+|+|||+++... ..+...+++|+.++.++...+...+.....-..++++|+...|+
T Consensus 77 ~~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~l~~~~~~~~iv~~ss~~~~~ 156 (253)
T PRK08217 77 AEDFGQLNGLINNAGILRDGLLVKAKDGKVTSKMSLEQFQSVIDVNLTGVFLCGREAAAKMIESGSKGVIINISSIARAG 156 (253)
T ss_pred HHHcCCCCEEEECCCccCcCcccccccccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhcCCCeEEEEEccccccC
Confidence 2 12899999987421 12334567899888766655443210011124567777755443
Q ss_pred cccCCccccCCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 139 GPIFDPSLAGQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 139 ~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.+. .. .....+.+.+.+... ...+++++.++|+.+.++.
T Consensus 157 ~~~-------------------~~--~Y~~sK~a~~~l~~~la~~~~~~~i~v~~v~pg~v~t~~ 200 (253)
T PRK08217 157 NMG-------------------QT--NYSASKAGVAAMTVTWAKELARYGIRVAAIAPGVIETEM 200 (253)
T ss_pred CCC-------------------Cc--hhHHHHHHHHHHHHHHHHHHHHcCcEEEEEeeCCCcCcc
Confidence 110 00 000111222222222 2468999999999998764
No 198
>PRK06124 gluconate 5-dehydrogenase; Provisional
Probab=99.50 E-value=6.9e-13 Score=107.61 Aligned_cols=164 Identities=15% Similarity=0.095 Sum_probs=108.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||++++++|+ +.|++|++++|++.... ....++. ++.+|++|++.+..+++++.
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 83 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALA-----GAGAHVLVNGRNAATLEAAVAALRAAGGAAE-ALAFDIADEEAVAAAFARID 83 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999764310 1134578 99999999998887776553
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAG 148 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g 148 (211)
. .+|.+||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||...+.+
T Consensus 84 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~~ss~~~~~~--------- 153 (256)
T PRK06124 84 AEHGRLDILVNNVGARDRRPLAELDDAAIRALLETDLVAPILLSRLAAQRMK-RQGYGRIIAITSIAGQVA--------- 153 (256)
T ss_pred HhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEeechhccC---------
Confidence 2 27899999886321 3445678899988888866654210 013467888777432211
Q ss_pred CCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCCceEecC
Q 028258 149 QLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSSVIIGAS 198 (211)
Q Consensus 149 ~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~~i~G~~ 198 (211)
.....+ ....+.+.+.+... ...++.+..++|+.+..+.
T Consensus 154 --------~~~~~~---Y~~sK~a~~~~~~~la~e~~~~~i~v~~i~pg~v~t~~ 197 (256)
T PRK06124 154 --------RAGDAV---YPAAKQGLTGLMRALAAEFGPHGITSNAIAPGYFATET 197 (256)
T ss_pred --------CCCccH---hHHHHHHHHHHHHHHHHHHHHhCcEEEEEEECCccCcc
Confidence 000000 00111122222111 3468999999999999875
No 199
>PRK05872 short chain dehydrogenase; Provisional
Probab=99.50 E-value=6.4e-13 Score=110.55 Aligned_cols=127 Identities=12% Similarity=-0.043 Sum_probs=91.5
Q ss_pred cccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHH
Q 028258 3 KQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 3 ~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|....+|++|||||+|+||++++++|+ +.|++|++++|+..... . ....+. .+.+|++|++++.+++
T Consensus 3 ~~~~l~gk~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~-~~~~Dv~d~~~v~~~~ 76 (296)
T PRK05872 3 PMTSLAGKVVVVTGAARGIGAELARRLH-----ARGAKLALVDLEEAELAALAAELGGDDRVL-TVVADVTDLAAMQAAA 76 (296)
T ss_pred CCCCCCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhcCCCcEE-EEEecCCCHHHHHHHH
Confidence 3444557899999999999999999999 68999999999765311 1 123445 5679999999888777
Q ss_pred Hhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 77 SLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 77 ~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+.+. ..+|.+||+++... ..+...+++|+.++.++++++...+. ....+|+++||...+
T Consensus 77 ~~~~~~~g~id~vI~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~~~~--~~~g~iv~isS~~~~ 147 (296)
T PRK05872 77 EEAVERFGGIDVVVANAGIASGGSVAQVDPDAFRRVIDVNLLGVFHTVRATLPALI--ERRGYVLQVSSLAAF 147 (296)
T ss_pred HHHHHHcCCCCEEEECCCcCCCcCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHH--HcCCEEEEEeCHhhc
Confidence 6542 13899999998632 13456688999999998888765421 012478888875443
No 200
>PRK12938 acetyacetyl-CoA reductase; Provisional
Probab=99.49 E-value=1.1e-12 Score=105.74 Aligned_cols=119 Identities=18% Similarity=0.111 Sum_probs=83.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC-CCC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP-PPG--W-----FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~-~~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|+++||||||+||++++++|+ +.|++|+++.++. ... + .....+. .+.+|++|.+++.+.++.+.
T Consensus 3 ~k~~lVtG~s~giG~~~a~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 76 (246)
T PRK12938 3 QRIAYVTGGMGGIGTSICQRLH-----KDGFKVVAGCGPNSPRRVKWLEDQKALGFDFI-ASEGNVGDWDSTKAAFDKVK 76 (246)
T ss_pred CCEEEEECCCChHHHHHHHHHH-----HcCCEEEEEcCCChHHHHHHHHHHHhcCCcEE-EEEcCCCCHHHHHHHHHHHH
Confidence 5899999999999999999999 6899988755432 211 0 0123566 77999999988877766542
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++.++.+++...+. ..+..+|+++||.
T Consensus 77 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~isS~ 141 (246)
T PRK12938 77 AEVGEIDVLVNNAGITRDVVFRKMTREDWTAVIDTNLTSLFNVTKQVIDGMV-ERGWGRIINISSV 141 (246)
T ss_pred HHhCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-HcCCeEEEEEech
Confidence 138999999986431 3455678999987776666544211 1135688888774
No 201
>PRK07062 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.4e-12 Score=106.47 Aligned_cols=122 Identities=16% Similarity=-0.001 Sum_probs=87.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
+++|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ....+. .+.+|++|++++.+.++
T Consensus 6 l~~k~~lItGas~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~ 79 (265)
T PRK07062 6 LEGRVAVVTGGSSGIGLATVELLL-----EAGASVAICGRDEERLASAEARLREKFPGARLL-AARCDVLDEADVAAFAA 79 (265)
T ss_pred cCCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEE-EEEecCCCHHHHHHHHH
Confidence 457899999999999999999999 68999999999765311 0 123577 88999999998877776
Q ss_pred hcc---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 78 LIS---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+. ..+|++||+|+.... .+...+++|+.+...+++++...+... +..+|+++||..
T Consensus 80 ~~~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~~ 148 (265)
T PRK07062 80 AVEARFGGVDMLVNNAGQGRVSTFADTTDDAWRDELELKYFSVINPTRAFLPLLRAS-AAASIVCVNSLL 148 (265)
T ss_pred HHHHhcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcc-CCcEEEEecccc
Confidence 542 138999999986321 355567888877666666654432101 235788887754
No 202
>PRK12744 short chain dehydrogenase; Provisional
Probab=99.49 E-value=1.7e-12 Score=105.47 Aligned_cols=105 Identities=12% Similarity=-0.082 Sum_probs=79.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------C--CCCCceeEEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------F--PTALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~--~~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|++|||||+|+||+++++.|+ +.|++|+.+.++..... . ....++ ++.+|++|++++.+.+
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~-----~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~~~~~~ 80 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLA-----AQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAV-AFQADLTTAAAVEKLF 80 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHH-----HCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEE-EEecCcCCHHHHHHHH
Confidence 45899999999999999999999 68999777776543210 0 123677 8899999999888777
Q ss_pred Hhccc---ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQ---EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~---~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+.. .+|++||+++... ..+...+++|+.++..+++++...
T Consensus 81 ~~~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~ 134 (257)
T PRK12744 81 DDAKAAFGRPDIAINTVGKVLKKPIVEISEAEYDEMFAVNSKSAFFFIKEAGRH 134 (257)
T ss_pred HHHHHhhCCCCEEEECCcccCCCCcccCCHHHHHHHHhhhhhHHHHHHHHHHHh
Confidence 65421 3899999998622 134456789999998888888764
No 203
>PRK05855 short chain dehydrogenase; Validated
Probab=99.49 E-value=4.7e-13 Score=120.22 Aligned_cols=126 Identities=10% Similarity=-0.062 Sum_probs=92.0
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+..+++|||||||+||++++++|+ ++|++|++++|+..+.. ....++. ++.+|++|++++.+.++.+
T Consensus 313 ~~~~~~lv~G~s~giG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 386 (582)
T PRK05855 313 FSGKLVVVTGAGSGIGRETALAFA-----REGAEVVASDIDEAAAERTAELIRAAGAVAH-AYRVDVSDADAMEAFAEWV 386 (582)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 345789999999999999999999 69999999999764311 1124678 8999999999888877664
Q ss_pred cc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 80 SQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
.. .+|++||+|+.... ++...+++|+.++.++.+++...+.....-.+|+++||...|.
T Consensus 387 ~~~~g~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~~~~~~g~iv~~sS~~~~~ 457 (582)
T PRK05855 387 RAEHGVPDIVVNNAGIGMAGGFLDTSAEDWDRVLDVNLWGVIHGCRLFGRQMVERGTGGHIVNVASAAAYA 457 (582)
T ss_pred HHhcCCCcEEEECCccCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEECChhhcc
Confidence 21 38999999987421 3445678999998888887654321111124788888876654
No 204
>PRK06139 short chain dehydrogenase; Provisional
Probab=99.49 E-value=6.6e-13 Score=112.25 Aligned_cols=123 Identities=15% Similarity=-0.062 Sum_probs=87.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||||+||++++++|+ ++|++|++++|+++... .....+. ++.+|++|++++.+.++.+
T Consensus 5 l~~k~vlITGAs~GIG~aia~~la-----~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~-~~~~Dv~d~~~v~~~~~~~ 78 (330)
T PRK06139 5 LHGAVVVITGASSGIGQATAEAFA-----RRGARLVLAARDEEALQAVAEECRALGAEVL-VVPTDVTDADQVKALATQA 78 (330)
T ss_pred CCCCEEEEcCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEeeCCCHHHHHHHHHHH
Confidence 346899999999999999999999 69999999999765321 0124567 7899999999888777654
Q ss_pred c---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 80 S---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
. ..+|++||+|+.... .+...+++|+.++.++.+++...+... +..+++.++|...
T Consensus 79 ~~~~g~iD~lVnnAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~~~~~-~~g~iV~isS~~~ 146 (330)
T PRK06139 79 ASFGGRIDVWVNNVGVGAVGRFEETPIEAHEQVIQTNLIGYMRDAHAALPIFKKQ-GHGIFINMISLGG 146 (330)
T ss_pred HHhcCCCCEEEECCCcCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHHc-CCCEEEEEcChhh
Confidence 2 138999999975321 234567899998888777664322101 2246777766443
No 205
>PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.49 E-value=7.1e-13 Score=107.67 Aligned_cols=123 Identities=12% Similarity=0.047 Sum_probs=88.5
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------C----------CCCCCceeEEEeeCC
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W----------FPTALVDRYITFDAL 67 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~----------~~~~~~~~~i~~Dl~ 67 (211)
++|++||||||| +||++++++|+ +.|++|+++.|++.+. . .....++ ++.+|++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~-----~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~ 77 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLA-----AKGIDIFFTYWSPYDKTMPWGMHDKEPVLLKEEIESYGVRCE-HMEIDLS 77 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHH-----HcCCcEEEEcCCccccccccccchhhHHHHHHHHHhcCCeEE-EEECCCC
Confidence 568999999995 79999999999 6899999999873210 0 0123578 9999999
Q ss_pred CHHHHHHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 68 DPTDTALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 68 d~~~~~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
|.+++...++.+.. .+|+|||+++.... ++...+++|+.++.++++++...+. .....+|+++||..
T Consensus 78 ~~~~~~~~~~~~~~~~g~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~iv~~ss~~ 156 (256)
T PRK12748 78 QPYAPNRVFYAVSERLGDPSILINNAAYSTHTRLEELTAEQLDKHYAVNVRATMLLSSAFAKQYD-GKAGGRIINLTSGQ 156 (256)
T ss_pred CHHHHHHHHHHHHHhCCCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHhh-hcCCeEEEEECCcc
Confidence 99988777765421 38999999976321 2344578999999999988765321 11235788888764
Q ss_pred ee
Q 028258 136 HY 137 (211)
Q Consensus 136 ~y 137 (211)
.+
T Consensus 157 ~~ 158 (256)
T PRK12748 157 SL 158 (256)
T ss_pred cc
Confidence 44
No 206
>COG2910 Putative NADH-flavin reductase [General function prediction only]
Probab=99.49 E-value=1.4e-12 Score=99.16 Aligned_cols=156 Identities=15% Similarity=0.131 Sum_probs=104.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++|.|+||||.+|++|+++++ .+||+|+++.|++.+... .+++. .++.|+.|++++.+.+.+. |.||..
T Consensus 1 mKIaiIgAsG~~Gs~i~~EA~-----~RGHeVTAivRn~~K~~~-~~~~~-i~q~Difd~~~~a~~l~g~----DaVIsA 69 (211)
T COG2910 1 MKIAIIGASGKAGSRILKEAL-----KRGHEVTAIVRNASKLAA-RQGVT-ILQKDIFDLTSLASDLAGH----DAVISA 69 (211)
T ss_pred CeEEEEecCchhHHHHHHHHH-----hCCCeeEEEEeChHhccc-cccce-eecccccChhhhHhhhcCC----ceEEEe
Confidence 368899999999999999999 699999999999987542 26777 8899999999998888884 555544
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe-eeecccCCccccCCCCCCCCCCcCCCCCCCCCC
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK-HYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPN 168 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~-~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~ 168 (211)
-+....+....+ ......|++.++.+ ++.|++.+.|+. -|..+ | -.-.++| +.|.
T Consensus 70 ~~~~~~~~~~~~---~k~~~~li~~l~~a-----gv~RllVVGGAGSL~id~-------g-------~rLvD~p--~fP~ 125 (211)
T COG2910 70 FGAGASDNDELH---SKSIEALIEALKGA-----GVPRLLVVGGAGSLEIDE-------G-------TRLVDTP--DFPA 125 (211)
T ss_pred ccCCCCChhHHH---HHHHHHHHHHHhhc-----CCeeEEEEcCccceEEcC-------C-------ceeecCC--CCch
Confidence 333322333322 12245677777765 678887777643 23221 1 1122333 2334
Q ss_pred cchh----HHHHHhh--cCCCceEEEecCCceEecCCC
Q 028258 169 FYYE----LEDVSAS--YSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 169 ~~~~----~e~~l~~--~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.|+. +.+.|.. +..+++||-+-|+.+|-|+.+
T Consensus 126 ey~~~A~~~ae~L~~Lr~~~~l~WTfvSPaa~f~PGer 163 (211)
T COG2910 126 EYKPEALAQAEFLDSLRAEKSLDWTFVSPAAFFEPGER 163 (211)
T ss_pred hHHHHHHHHHHHHHHHhhccCcceEEeCcHHhcCCccc
Confidence 4443 2333333 356699999999999999773
No 207
>PRK06483 dihydromonapterin reductase; Provisional
Probab=99.48 E-value=1.4e-12 Score=104.68 Aligned_cols=121 Identities=15% Similarity=0.022 Sum_probs=86.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhccc---c
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQ---E 82 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~---~ 82 (211)
|+|++|||||+|+||++++++|+ ++|++|++++|++.+.. ....+++ ++.+|++|++++.+.++.+.. .
T Consensus 1 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~~ 74 (236)
T PRK06483 1 MPAPILITGAGQRIGLALAWHLL-----AQGQPVIVSYRTHYPAIDGLRQAGAQ-CIQADFSTNAGIMAFIDELKQHTDG 74 (236)
T ss_pred CCceEEEECCCChHHHHHHHHHH-----HCCCeEEEEeCCchhHHHHHHHcCCE-EEEcCCCCHHHHHHHHHHHHhhCCC
Confidence 56899999999999999999999 68999999999765321 1123467 899999999988887766531 3
Q ss_pred cceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecC
Q 028258 83 ITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGT 134 (211)
Q Consensus 83 ~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~ 134 (211)
+|++||+++... .++...+++|+.++..+.+.+...+.... +..+++++||.
T Consensus 75 id~lv~~ag~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~~~g~iv~~ss~ 136 (236)
T PRK06483 75 LRAIIHNASDWLAEKPGAPLADVLARMMQIHVNAPYLLNLALEDLLRGHGHAASDIIHITDY 136 (236)
T ss_pred ccEEEECCccccCCCcCccCHHHHHHHHHHcchHHHHHHHHHHHHHHhCCCCCceEEEEcch
Confidence 899999997531 13455678898888777666655321111 12467777653
No 208
>PRK07109 short chain dehydrogenase; Provisional
Probab=99.48 E-value=8.8e-13 Score=111.65 Aligned_cols=123 Identities=12% Similarity=-0.054 Sum_probs=86.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||||+||++++++|+ ++|++|++++|++.... ....++. ++.+|++|++++.++++.+.
T Consensus 7 ~~k~vlITGas~gIG~~la~~la-----~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~-~v~~Dv~d~~~v~~~~~~~~ 80 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFA-----RRGAKVVLLARGEEGLEALAAEIRAAGGEAL-AVVADVADAEAVQAAADRAE 80 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHHcCCcEE-EEEecCCCHHHHHHHHHHHH
Confidence 45899999999999999999999 68999999999764311 0134577 88999999998888776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++.... .+...+++|+.+..++...+...+... +..+|+++||...|
T Consensus 81 ~~~g~iD~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~-~~g~iV~isS~~~~ 148 (334)
T PRK07109 81 EELGPIDTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPR-DRGAIIQVGSALAY 148 (334)
T ss_pred HHCCCCCEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCcEEEEeCChhhc
Confidence 1 38999999986321 234456788776655544443321101 23678888886554
No 209
>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase. Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.
Probab=99.48 E-value=1.2e-12 Score=106.82 Aligned_cols=119 Identities=11% Similarity=-0.045 Sum_probs=86.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
.+|+++||||||+||++++++|+ ++|++|++++|+..... .....+. .+.+|++|.+++.++++.+.
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~-----~~G~~V~~~~r~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 77 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFV-----AEGARVAVLDKSAAGLQELEAAHGDAVV-GVEGDVRSLDDHKEAVARCVAAF 77 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCceE-EEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999764311 1124577 88999999988777766542
Q ss_pred cccceEEeecccCC--------c------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ--------E------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~--------~------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+|+... . .+...+++|+.++.++++++.+.+... + .++++++|.
T Consensus 78 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~-~-g~iv~~sS~ 143 (262)
T TIGR03325 78 GKIDCLIPNAGIWDYSTALVDIPDDRIDEAFDEVFHINVKGYLLAVKAALPALVAS-R-GSVIFTISN 143 (262)
T ss_pred CCCCEEEECCCCCccCCccccCCchhhhHHHHHhheeecHhHHHHHHHHHHHHhhc-C-CCEEEEecc
Confidence 12899999997421 0 244678999999999998887653111 1 345666553
No 210
>PRK07097 gluconate 5-dehydrogenase; Provisional
Probab=99.48 E-value=1.2e-12 Score=107.03 Aligned_cols=120 Identities=13% Similarity=-0.013 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ...++. ++.+|++|++++.+++..+.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~-----~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~ 82 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYA-----KAGATIVFNDINQELVDKGLAAYRELGIEAH-GYVCDVTDEDGVQAMVSQIE 82 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999988765311 0 123577 89999999998888776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|++||+++.... .+...+++|..++..+.+++...+... +..+|+++||.
T Consensus 83 ~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS~ 147 (265)
T PRK07097 83 KEVGVIDILVNNAGIIKRIPMLEMSAEDFRQVIDIDLNAPFIVSKAVIPSMIKK-GHGKIINICSM 147 (265)
T ss_pred HhCCCCCEEEECCCCCCCCCcccCCHHHHHHHHHhhhHHHHHHHHHHHHHHHhc-CCcEEEEEcCc
Confidence 1 28999999986431 344567889988877777665432101 34577777763
No 211
>TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase. This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis.
Probab=99.48 E-value=9.8e-13 Score=105.23 Aligned_cols=117 Identities=19% Similarity=0.072 Sum_probs=85.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
+||||++|+||++++++|+ ++|++|++++|+.... . .....++ ++.+|++|++++.+.++++..
T Consensus 1 vlItG~~g~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLA-----KEGAKVIITYRSSEEGAEEVVEELKAYGVKAL-GVVCDVSDREDVKAVVEEIEEEL 74 (239)
T ss_pred CEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCchhHHHHHHHHHHhcCCceE-EEEecCCCHHHHHHHHHHHHHHh
Confidence 5899999999999999999 6899999999875321 0 0123577 899999999988888766421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.|+|+++... ..+...+++|+.++.++++++...+. ..+..+|+++||..
T Consensus 75 ~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~-~~~~~~~v~~sS~~ 137 (239)
T TIGR01830 75 GPIDILVNNAGITRDNLLMRMKEEDWDAVIDTNLTGVFNLTQAVLRIMI-KQRSGRIINISSVV 137 (239)
T ss_pred CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHH-hcCCeEEEEECCcc
Confidence 2799999998743 13445678999999999888765310 01345788888753
No 212
>PRK07677 short chain dehydrogenase; Provisional
Probab=99.47 E-value=1.6e-12 Score=105.36 Aligned_cols=120 Identities=13% Similarity=-0.012 Sum_probs=87.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
+|+++||||+|+||++++++|+ +.|++|++++|+..... . ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFA-----EEGANVVITGRTKEKLEEAKLEIEQFPGQVL-TVQMDVRNPEDVQKMVEQIDE 74 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHHHH
Confidence 3789999999999999999999 68999999999765311 0 124678 89999999998877776542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+++... ..+...+++|+.++.++++++.+.+.....-.+++++||.
T Consensus 75 ~~~~id~lI~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~ii~isS~ 139 (252)
T PRK07677 75 KFGRIDALINNAAGNFICPAEDLSVNGWNSVIDIVLNGTFYCSQAVGKYWIEKGIKGNIINMVAT 139 (252)
T ss_pred HhCCccEEEECCCCCCCCCcccCCHHHHHHHHhHhhHHHHHHHHHHHHHHHhcCCCEEEEEEcCh
Confidence 12899999987421 1345678999999999998885432001113577777764
No 213
>PRK07832 short chain dehydrogenase; Provisional
Probab=99.46 E-value=2.2e-12 Score=105.81 Aligned_cols=120 Identities=13% Similarity=0.007 Sum_probs=84.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCC-CCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPT-ALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|+++||||||+||++++++|+ +.|++|++++|+++... ... ..+. ++.+|++|++++.+.++.+.
T Consensus 1 k~vlItGas~giG~~la~~la-----~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (272)
T PRK07832 1 KRCFVTGAASGIGRATALRLA-----AQGAELFLTDRDADGLAQTVADARALGGTVPE-HRALDISDYDAVAAFAADIHA 74 (272)
T ss_pred CEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCcce-EEEeeCCCHHHHHHHHHHHHH
Confidence 479999999999999999999 68999999998764310 011 2234 67899999988777665542
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++... .++...+++|+.++.++++++...+.......+|+++||..
T Consensus 75 ~~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~l~~~~~~g~ii~isS~~ 140 (272)
T PRK07832 75 AHGSMDVVMNIAGISAWGTVDRLTHEQWRRMVDVNLMGPIHVIETFVPPMVAAGRGGHLVNVSSAA 140 (272)
T ss_pred hcCCCCEEEECCCCCCCCccccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEcccc
Confidence 12899999997532 13455679999999999988764321011235778887743
No 214
>PRK07069 short chain dehydrogenase; Validated
Probab=99.46 E-value=2.8e-12 Score=103.48 Aligned_cols=116 Identities=15% Similarity=0.033 Sum_probs=82.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCCC-----C-C---CCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPGW-----F-P---TALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~~-----~-~---~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++||||+|+||+++++.|+ ++|++|++++|+ .+... . . ...+. .+.+|++|++++.++++.+.
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 74 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMA-----EQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAF-AAVQDVTDEAQWQALLAQAA 74 (251)
T ss_pred CEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEE-EEEeecCCHHHHHHHHHHHH
Confidence 38999999999999999999 689999999987 33210 0 0 11234 57899999998887776542
Q ss_pred c---ccceEEeecccCCc---------hhHHHHhhcHH----HHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 81 Q---EITNLFWVPLQVQE---------SEEVNIFKNST----MLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~---------~~~~~~~~n~~----~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
. .+|++||+++.... ++...+++|+. +++.+++.+.+. +.++|+++||...+
T Consensus 75 ~~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-----~~~~ii~~ss~~~~ 142 (251)
T PRK07069 75 DAMGGLSVLVNNAGVGSFGAIEQIELDEWRRVMAINVESIFLGCKHALPYLRAS-----QPASIVNISSVAAF 142 (251)
T ss_pred HHcCCccEEEECCCcCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhhc-----CCcEEEEecChhhc
Confidence 1 27999999986431 23445678887 666677776654 35788888876554
No 215
>PRK09072 short chain dehydrogenase; Provisional
Probab=99.46 E-value=1.2e-12 Score=106.72 Aligned_cols=120 Identities=17% Similarity=0.033 Sum_probs=87.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.++++|||||+|+||++++++|+ ++|++|++++|++.... ....+++ ++.+|++|++++...++.+.
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~d~~~~~~~~~~~~~ 77 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALA-----AAGARLLLVGRNAEKLEALAARLPYPGRHR-WVVADLTSEAGREAVLARARE 77 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHHHHh
Confidence 46889999999999999999999 68999999999764311 0124678 99999999988777665442
Q ss_pred -cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 -QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 -~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|.+||+++.... .....+++|+.++.++++.+...+... +..+++++||.
T Consensus 78 ~~~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~~~-~~~~iv~isS~ 140 (263)
T PRK09072 78 MGGINVLINNAGVNHFALLEDQDPEAIERLLALNLTAPMQLTRALLPLLRAQ-PSAMVVNVGST 140 (263)
T ss_pred cCCCCEEEECCCCCCccccccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhc-CCCEEEEecCh
Confidence 138999999986421 234567899999888888876532101 23456766663
No 216
>TIGR02415 23BDH acetoin reductases. One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).
Probab=99.46 E-value=1.8e-12 Score=104.84 Aligned_cols=119 Identities=12% Similarity=-0.031 Sum_probs=84.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
|+++||||+|+||++++++|+ +.|++|+++.|++.... .....+. ++.+|++|++++.++++.+..
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~~~~ 74 (254)
T TIGR02415 1 KVALVTGGAQGIGKGIAERLA-----KDGFAVAVADLNEETAKETAKEINQAGGKAV-AYKLDVSDKDQVFSAIDQAAEK 74 (254)
T ss_pred CEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEcCCCCHHHHHHHHHHHHHH
Confidence 579999999999999999999 68999999998754210 1134577 899999999988777665421
Q ss_pred --ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 82 --EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 82 --~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+|++||+++... .++...+++|+.++..+++++...+.......+++++||.
T Consensus 75 ~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 138 (254)
T TIGR02415 75 FGGFDVMVNNAGVAPITPILEITEEELKKVYNVNVKGVLFGIQAAARQFKKQGHGGKIINAASI 138 (254)
T ss_pred cCCCCEEEECCCcCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHHhCCCCeEEEEecch
Confidence 2799999997632 1344567899988877766655432101112577777664
No 217
>PRK06924 short chain dehydrogenase; Provisional
Probab=99.45 E-value=2.6e-12 Score=103.85 Aligned_cols=119 Identities=14% Similarity=0.061 Sum_probs=81.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhcccc--
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQE-- 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~-- 82 (211)
|++|||||||+||++++++|+ ++|++|++++|++.+. .....+++ ++.+|++|++++.+.++.+...
T Consensus 2 k~vlItGasggiG~~ia~~l~-----~~g~~V~~~~r~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~~ 75 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLL-----EKGTHVISISRTENKELTKLAEQYNSNLT-FHSLDLQDVHELETNFNEILSSIQ 75 (251)
T ss_pred cEEEEecCCchHHHHHHHHHH-----hcCCEEEEEeCCchHHHHHHHhccCCceE-EEEecCCCHHHHHHHHHHHHHhcC
Confidence 689999999999999999999 6899999999976321 11235688 8999999999888877654210
Q ss_pred -----cceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 83 -----ITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 83 -----~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++++++++... ..+...+++|+.+...+++.+...+.......+|+++||.
T Consensus 76 ~~~~~~~~~v~~ag~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~iv~~sS~ 142 (251)
T PRK06924 76 EDNVSSIHLINNAGMVAPIKPIEKAESEELITNVHLNLLAPMILTSTFMKHTKDWKVDKRVINISSG 142 (251)
T ss_pred cccCCceEEEEcceecccCcccccCCHHHHHHHhccceehHHHHHHHHHHHHhccCCCceEEEecch
Confidence 126788876532 1244567888887655555554332101123577887774
No 218
>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.45 E-value=2.5e-12 Score=105.22 Aligned_cols=129 Identities=16% Similarity=0.011 Sum_probs=93.9
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCC-CceeEEEeeCCCHHHH
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTA-LVDRYITFDALDPTDT 72 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~-~~~~~i~~Dl~d~~~~ 72 (211)
..|..+.+|+|+|||||++||.+++.+|. +.|.+++.+.|+..+.. .... ++. ++.+|++|.+++
T Consensus 5 ~~~e~~~~kvVvITGASsGIG~~lA~~la-----~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~-~~~~Dvs~~~~~ 78 (282)
T KOG1205|consen 5 LFMERLAGKVVLITGASSGIGEALAYELA-----KRGAKLVLVARRARRLERVAEELRKLGSLEKVL-VLQLDVSDEESV 78 (282)
T ss_pred ccHHHhCCCEEEEeCCCcHHHHHHHHHHH-----hCCCceEEeehhhhhHHHHHHHHHHhCCcCccE-EEeCccCCHHHH
Confidence 35666778999999999999999999999 69998777777654311 1112 588 999999999998
Q ss_pred HHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.++++.+.. .+|+++|.||.... +....+++|+.|+-.+..++...+... +-.||+.+||..-+
T Consensus 79 ~~~~~~~~~~fg~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r-~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 79 KKFVEWAIRHFGRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKR-NDGHIVVISSIAGK 154 (282)
T ss_pred HHHHHHHHHhcCCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhc-CCCeEEEEeccccc
Confidence 888744321 39999999987542 223467899988777777776654211 13688888886543
No 219
>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated
Probab=99.45 E-value=3.2e-12 Score=103.78 Aligned_cols=121 Identities=8% Similarity=-0.091 Sum_probs=88.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|++|||||+|+||++++++|+ ++|++|++++|+..... ....++. ++.+|++|.+++.++++.+.
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~-----~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~D~~~~~~i~~~~~~~~ 83 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFA-----TAGASVVVSDINADAANHVVDEIQQLGGQAF-ACRCDITSEQELSALADFAL 83 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HCCCeEEEEeCCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999988754311 0123567 88999999998877766542
Q ss_pred c---ccceEEeecccCC--------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQ--------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~--------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. .+|++||+++... ..+...+++|+.++.++++++...+... +..+++++||..
T Consensus 84 ~~~~~~d~li~~ag~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~iv~isS~~ 148 (255)
T PRK06113 84 SKLGKVDILVNNAGGGGPKPFDMPMADFRRAYELNVFSFFHLSQLVAPEMEKN-GGGVILTITSMA 148 (255)
T ss_pred HHcCCCCEEEECCCCCCCCCCCCCHHHHHHHHHHhhhhHHHHHHHHHHHHHhc-CCcEEEEEeccc
Confidence 1 2899999998632 1334457899999999998886432101 224778887743
No 220
>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=99.44 E-value=3.8e-12 Score=103.75 Aligned_cols=124 Identities=8% Similarity=-0.071 Sum_probs=83.8
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-C-----C---CCCCCceeEEEeeCCCHHHHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-G-----W---FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~-----~---~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
|..+++|++|||||+++||++++++|+ +.|++|+++.|+... . . .....+. ++.+|++|++++.+
T Consensus 3 ~~~l~~k~vlItGas~gIG~~ia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~ 76 (260)
T PRK08416 3 SNEMKGKTLVISGGTRGIGKAIVYEFA-----QSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAK-AYPLNILEPETYKE 76 (260)
T ss_pred ccccCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceE-EEEcCCCCHHHHHH
Confidence 334457999999999999999999999 699999888764321 1 0 0124577 89999999998888
Q ss_pred HHHhccc---ccceEEeecccCC---------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ---------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~---------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++.+.. .+|+++|+|+... ..+...+++|+.+...+.+.+...+... +-.+|+++||.
T Consensus 77 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~isS~ 153 (260)
T PRK08416 77 LFKKIDEDFDRVDFFISNAIISGRAVVGGYTKFMRLKPKGLNNIYTATVNAFVVGAQEAAKRMEKV-GGGSIISLSST 153 (260)
T ss_pred HHHHHHHhcCCccEEEECccccccccccccCChhhCCHHHHHHHHhhhhHHHHHHHHHHHHhhhcc-CCEEEEEEecc
Confidence 7776531 3899999996421 1233456777776655555544332101 23578888774
No 221
>PRK07041 short chain dehydrogenase; Provisional
Probab=99.44 E-value=9.1e-13 Score=105.16 Aligned_cols=113 Identities=14% Similarity=0.064 Sum_probs=87.1
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|||||+|+||++++++|+ ++|++|++++|++.... . ...+++ ++.+|++|++++.++++.... +|++
T Consensus 1 lItGas~~iG~~~a~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~-id~l 73 (230)
T PRK07041 1 LVVGGSSGIGLALARAFA-----AEGARVTIASRSRDRLAAAARALGGGAPVR-TAALDITDEAAVDAFFAEAGP-FDHV 73 (230)
T ss_pred CeecCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHhcCCceE-EEEccCCCHHHHHHHHHhcCC-CCEE
Confidence 699999999999999999 68999999999754311 0 134678 899999999999999887654 8999
Q ss_pred EeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 87 FWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 87 ~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
||+++... .++...+++|+.++.+++++.... +..+|+++||...|
T Consensus 74 i~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~g~iv~~ss~~~~ 128 (230)
T PRK07041 74 VITAADTPGGPVRALPLAAAQAAMDSKFWGAYRVARAARIA-----PGGSLTFVSGFAAV 128 (230)
T ss_pred EECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHhhhhhc-----CCeEEEEECchhhc
Confidence 99997632 134556789999998988854432 35788888876544
No 222
>TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families.
Probab=99.44 E-value=3.1e-12 Score=102.59 Aligned_cols=118 Identities=13% Similarity=0.092 Sum_probs=83.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC--C-----CCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG--W-----FPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~--~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|++|||||||+||++++++|+ +.|++|+++.|+.. .. + ....++. ++.+|++|++++.++++.+.
T Consensus 1 k~~lItG~sg~iG~~la~~l~-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~ 74 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLA-----KDGYRVAANCGPNEERAEAWLQEQGALGFDFR-VVEGDVSSFESCKAAVAKVEA 74 (242)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHhhCCceE-EEEecCCCHHHHHHHHHHHHH
Confidence 679999999999999999999 68999999888322 11 0 0124678 89999999988877776542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|+|||+++.... ++...+++|+.++..+++++...+. ..+..+|+++||.
T Consensus 75 ~~~~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~~~~~~iv~iss~ 138 (242)
T TIGR01829 75 ELGPIDVLVNNAGITRDATFKKMTYEQWSAVIDTNLNSVFNVTQPVIDGMR-ERGWGRIINISSV 138 (242)
T ss_pred HcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHH-hcCCcEEEEEcch
Confidence 138999999975321 3445678898887776555443210 1134678888764
No 223
>PRK08324 short chain dehydrogenase; Validated
Probab=99.43 E-value=1.5e-12 Score=119.87 Aligned_cols=122 Identities=15% Similarity=0.009 Sum_probs=89.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
.+|++|||||+|+||++++++|+ +.|++|++++|++.... . ....+. ++.+|++|++++.++++.+.
T Consensus 421 ~gk~vLVTGasggIG~~la~~L~-----~~Ga~Vvl~~r~~~~~~~~~~~l~~~~~v~-~v~~Dvtd~~~v~~~~~~~~~ 494 (681)
T PRK08324 421 AGKVALVTGAAGGIGKATAKRLA-----AEGACVVLADLDEEAAEAAAAELGGPDRAL-GVACDVTDEAAVQAAFEEAAL 494 (681)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCcCEEEEEeCCHHHHHHHHHHHhccCcEE-EEEecCCCHHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999999865311 0 113678 89999999998887776541
Q ss_pred --cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCc-eEEEEeecCee
Q 028258 81 --QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRL-RHVALLTGTKH 136 (211)
Q Consensus 81 --~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~-~~~~~~s~~~~ 136 (211)
..+|+|||+++... ..+...+++|+.++.++++++...+... +. .+|+++||...
T Consensus 495 ~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~l~~~-~~~g~iV~vsS~~~ 561 (681)
T PRK08324 495 AFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNATGHFLVAREAVRIMKAQ-GLGGSIVFIASKNA 561 (681)
T ss_pred HcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhc-CCCcEEEEECCccc
Confidence 12899999998532 1355677899999888877765432111 22 57788777543
No 224
>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.43 E-value=3.9e-12 Score=103.38 Aligned_cols=118 Identities=11% Similarity=-0.017 Sum_probs=85.8
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CCCCCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPTALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
++|+++||||+ +.||++++++|+ ++|++|+++.|+.... ......+. ++.+|++|++++.++++.+.
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la-----~~G~~Vi~~~r~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~~~~~ 79 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIK-----DQGATVIYTYQNDRMKKSLQKLVDEEDL-LVECDVASDESIERAFATIKE 79 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEecCchHHHHHHHhhccCcee-EEeCCCCCHHHHHHHHHHHHH
Confidence 36899999999 799999999999 6899999998863210 01124577 89999999998877766542
Q ss_pred --cccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 --QEITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 --~~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+|+... .++...+++|+.+...+.+++...+. +-.+++++||.
T Consensus 80 ~~g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~in~~~~~~l~~~~~~~~~---~~g~Iv~iss~ 145 (252)
T PRK06079 80 RVGKIDGIVHAIAYAKKEELGGNVTDTSRDGYALAQDISAYSLIAVAKYARPLLN---PGASIVTLTYF 145 (252)
T ss_pred HhCCCCEEEEcccccccccccCCcccCCHHHHHHHhCcccHHHHHHHHHHHHhcc---cCceEEEEecc
Confidence 13899999987531 13455678999988888888776532 11466776653
No 225
>PRK07201 short chain dehydrogenase; Provisional
Probab=99.43 E-value=1.9e-12 Score=118.48 Aligned_cols=124 Identities=16% Similarity=0.024 Sum_probs=90.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+.+|+++||||||+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|.+++.++++.+
T Consensus 369 ~~~k~vlItGas~giG~~la~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~ 442 (657)
T PRK07201 369 LVGKVVLITGASSGIGRATAIKVA-----EAGATVFLVARNGEALDELVAEIRAKGGTAH-AYTCDLTDSAAVDHTVKDI 442 (657)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEecCCCHHHHHHHHHHH
Confidence 346899999999999999999999 68999999999765311 0134678 8999999999888877654
Q ss_pred cc---ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 80 SQ---EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.. .+|++||+|+... .++...+++|+.++.+++.++...+. ..+..+|+++||...|
T Consensus 443 ~~~~g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~-~~~~g~iv~isS~~~~ 513 (657)
T PRK07201 443 LAEHGHVDYLVNNAGRSIRRSVENSTDRFHDYERTMAVNYFGAVRLILGLLPHMR-ERRFGHVVNVSSIGVQ 513 (657)
T ss_pred HHhcCCCCEEEECCCCCCCCChhhcCCCHHHHHHHHHHHHHHHHHHHHHHHHhhh-hcCCCEEEEECChhhc
Confidence 21 2899999998531 12345678999988887776654321 1134688888886555
No 226
>PRK08936 glucose-1-dehydrogenase; Provisional
Probab=99.43 E-value=5.8e-12 Score=102.61 Aligned_cols=121 Identities=11% Similarity=-0.112 Sum_probs=81.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..|++|||||+|+||++++++|+ ++|++|+++.|+..... ....++. ++.+|++|.+++.+.++.+
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~-----~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~i~~~~~~~ 79 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFG-----KEKAKVVINYRSDEEEANDVAEEIKKAGGEAI-AVKGDVTVESDVVNLIQTA 79 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEecCCCHHHHHHHHHHH
Confidence 46899999999999999999999 68999988888543210 0124567 8899999999887776654
Q ss_pred c---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 S---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. ..+|++||+++.... .+...+++|+.++..+...+...+.....-.+++++||.
T Consensus 80 ~~~~g~id~lv~~ag~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~l~~~~~~~~~g~iv~~sS~ 146 (261)
T PRK08936 80 VKEFGTLDVMINNAGIENAVPSHEMSLEDWNKVINTNLTGAFLGSREAIKYFVEHDIKGNIINMSSV 146 (261)
T ss_pred HHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEEccc
Confidence 2 138999999986321 244567889877655544433221001112467777764
No 227
>PRK07831 short chain dehydrogenase; Provisional
Probab=99.42 E-value=4.5e-12 Score=103.31 Aligned_cols=120 Identities=9% Similarity=-0.090 Sum_probs=84.9
Q ss_pred CCCeEEEEcCCC-hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTG-ISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG-~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++||||+| .||+++++.|+ ++|++|++++|+..+.. .....+. ++.+|+++++++.++++
T Consensus 16 ~~k~vlItG~sg~gIG~~ia~~l~-----~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~~~~~~~ 89 (262)
T PRK07831 16 AGKVVLVTAAAGTGIGSATARRAL-----EEGARVVISDIHERRLGETADELAAELGLGRVE-AVVCDVTSEAQVDALID 89 (262)
T ss_pred CCCEEEEECCCcccHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEE-EEEccCCCHHHHHHHHH
Confidence 468999999997 79999999999 68999999988764311 0113577 88999999988887776
Q ss_pred hcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 78 LIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+. ..+|.+||+++... ..+...+++|+.++..+++++...+.....-.++++++|
T Consensus 90 ~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~g~iv~~ss 157 (262)
T PRK07831 90 AAVERLGRLDVLVNNAGLGGQTPVVDMTDDEWSRVLDVTLTGTFRATRAALRYMRARGHGGVIVNNAS 157 (262)
T ss_pred HHHHHcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCcEEEEeCc
Confidence 542 12899999998632 134556788999888887776643210111245666555
No 228
>PRK06484 short chain dehydrogenase; Validated
Probab=99.42 E-value=3e-12 Score=114.21 Aligned_cols=118 Identities=12% Similarity=-0.073 Sum_probs=89.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+|++|||||+|+||++++++|+ ++|++|++++|++.+.. .....+. .+.+|++|++++.+.++.+..
T Consensus 269 ~k~~lItGas~gIG~~~a~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~g 342 (520)
T PRK06484 269 PRVVAITGGARGIGRAVADRFA-----AAGDRLLIIDRDAEGAKKLAEALGDEHL-SVQADITDEAAVESAFAQIQARWG 342 (520)
T ss_pred CCEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999999999999999999 69999999999764321 0124566 789999999988877765421
Q ss_pred ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+|+... .++...+++|+.++.++.+++...+ .+-.+|+++||..
T Consensus 343 ~id~li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~---~~~g~iv~isS~~ 403 (520)
T PRK06484 343 RLDVLVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLM---SQGGVIVNLGSIA 403 (520)
T ss_pred CCCEEEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHh---ccCCEEEEECchh
Confidence 3899999998631 1345678999999999998887653 1225788887753
No 229
>PRK05884 short chain dehydrogenase; Provisional
Probab=99.40 E-value=4.2e-12 Score=101.42 Aligned_cols=114 Identities=15% Similarity=0.055 Sum_probs=84.9
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++||||+|+||++++++|+ ++|++|++++|+.++.. ....+++ ++.+|++|++++.+.++.+...+|.+||
T Consensus 2 ~vlItGas~giG~~ia~~l~-----~~g~~v~~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~id~lv~ 75 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFR-----NDGHKVTLVGARRDDLEVAAKELDVD-AIVCDNTDPASLEEARGLFPHHLDTIVN 75 (223)
T ss_pred eEEEEeCCchHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHhccCc-EEecCCCCHHHHHHHHHHHhhcCcEEEE
Confidence 59999999999999999999 68999999999765321 0112467 8999999999988887765323799999
Q ss_pred ecccC--------------CchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 89 VPLQV--------------QESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 89 ~a~~~--------------~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+++.. ..++...+++|+.++.++++++...+. .-.+++.+||
T Consensus 76 ~ag~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~~~~~~~~~~~---~~g~Iv~isS 131 (223)
T PRK05884 76 VPAPSWDAGDPRTYSLADTANAWRNALDATVLSAVLTVQSVGDHLR---SGGSIISVVP 131 (223)
T ss_pred CCCccccCCCCcccchhcCHHHHHHHHHHHHHHHHHHHHHHHHHhh---cCCeEEEEec
Confidence 97631 013455679999999999988876531 1146777765
No 230
>PRK07578 short chain dehydrogenase; Provisional
Probab=99.40 E-value=1.6e-11 Score=96.10 Aligned_cols=103 Identities=17% Similarity=0.195 Sum_probs=80.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
+++||||+|+||++++++|. ++ ++|++++|++. .+.+|++|++++.+.++.+.. +|++||++
T Consensus 2 ~vlItGas~giG~~la~~l~-----~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~-id~lv~~a 63 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELS-----KR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGK-VDAVVSAA 63 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHH-----hc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCC-CCEEEECC
Confidence 69999999999999999999 45 89999998643 457999999999998887654 89999999
Q ss_pred ccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 91 LQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 91 ~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+... .++...+++|+.++.++.+++...+. +-..|+++||.
T Consensus 64 g~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~---~~g~iv~iss~ 113 (199)
T PRK07578 64 GKVHFAPLAEMTDEDFNVGLQSKLMGQVNLVLIGQHYLN---DGGSFTLTSGI 113 (199)
T ss_pred CCCCCCchhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHh---cCCeEEEEccc
Confidence 7532 13445678899999899988776421 22456776653
No 231
>TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase.
Probab=99.40 E-value=6.2e-12 Score=115.53 Aligned_cols=121 Identities=12% Similarity=0.018 Sum_probs=83.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---------CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---------FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|++|||||+|+||++++++|+ +.|++|++++|+..... .....+. .+.+|++|++++.++++.
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La-----~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~-~v~~Dvtd~~~v~~a~~~ 486 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLA-----AEGAHVVLADLNLEAAEAVAAEINGQFGAGRAV-ALKMDVTDEQAVKAAFAD 486 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEE-EEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999 68999999999754311 0113566 889999999998888775
Q ss_pred ccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+.... .+...+++|+.+...+...+...+.....-.+|+++||.
T Consensus 487 i~~~~g~iDilV~nAG~~~~~~~~~~~~e~~~~~~~vN~~g~~~l~~~al~~m~~~~~~g~IV~iSS~ 554 (676)
T TIGR02632 487 VALAYGGVDIVVNNAGIATSSPFEETTLQEWQLNLDILATGYFLVAREAFRQMREQGLGGNIVFIASK 554 (676)
T ss_pred HHHhcCCCcEEEECCCCCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCh
Confidence 421 28999999986431 344567788887666554443221001112467787774
No 232
>KOG4039 consensus Serine/threonine kinase TIP30/CC3 [Signal transduction mechanisms]
Probab=99.40 E-value=7.6e-12 Score=94.64 Aligned_cols=154 Identities=14% Similarity=0.154 Sum_probs=105.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
+++.++|.||||..|+.+++++.+ ...+. |+++.|+..........+. ....|....+++.+.+.+ +|+.
T Consensus 17 q~~s~fvlGAtG~~G~~llk~~~E----~~~FSKV~~i~RR~~~d~at~k~v~-q~~vDf~Kl~~~a~~~qg----~dV~ 87 (238)
T KOG4039|consen 17 QNMSGFVLGATGLCGGGLLKHAQE----APQFSKVYAILRRELPDPATDKVVA-QVEVDFSKLSQLATNEQG----PDVL 87 (238)
T ss_pred hccceEEEeccccccHHHHHHHHh----cccceeEEEEEeccCCCccccceee-eEEechHHHHHHHhhhcC----CceE
Confidence 356799999999999999999994 23344 9999998754333456666 778888877777777666 6777
Q ss_pred EeecccCC--chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCC
Q 028258 87 FWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRL 164 (211)
Q Consensus 87 ~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~ 164 (211)
|.|-+... ...+..+++...-...+.++++.. ++++|+++||... +.++. .
T Consensus 88 FcaLgTTRgkaGadgfykvDhDyvl~~A~~AKe~-----Gck~fvLvSS~GA---------------------d~sSr-F 140 (238)
T KOG4039|consen 88 FCALGTTRGKAGADGFYKVDHDYVLQLAQAAKEK-----GCKTFVLVSSAGA---------------------DPSSR-F 140 (238)
T ss_pred EEeecccccccccCceEeechHHHHHHHHHHHhC-----CCeEEEEEeccCC---------------------Ccccc-e
Confidence 76666543 234456677776666777777765 7899999988532 11111 1
Q ss_pred CCCCcchhHHHHHhhcCCCc-eEEEecCCceEecCC
Q 028258 165 PFPNFYYELEDVSASYSPAI-TYSVHRSSVIIGASP 199 (211)
Q Consensus 165 ~~~~~~~~~e~~l~~~~~~~-~~~i~Rp~~i~G~~~ 199 (211)
-.+......|+-+.+ .++ .++|+||+.+.|..+
T Consensus 141 lY~k~KGEvE~~v~e--L~F~~~~i~RPG~ll~~R~ 174 (238)
T KOG4039|consen 141 LYMKMKGEVERDVIE--LDFKHIIILRPGPLLGERT 174 (238)
T ss_pred eeeeccchhhhhhhh--ccccEEEEecCcceecccc
Confidence 123333445555544 455 889999999999877
No 233
>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional
Probab=99.39 E-value=1.2e-11 Score=99.86 Aligned_cols=120 Identities=13% Similarity=0.017 Sum_probs=83.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--------CCCCCceeEEEeeCC--CHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--------FPTALVDRYITFDAL--DPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--------~~~~~~~~~i~~Dl~--d~~~~~~~~~ 77 (211)
..|++|||||+|+||.+++++|+ +.|++|++++|++.+.. .....++ ++.+|++ +.+++.+.++
T Consensus 11 ~~k~vlItG~~g~iG~~la~~l~-----~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~d~~~~~~~~~~~~~~ 84 (247)
T PRK08945 11 KDRIILVTGAGDGIGREAALTYA-----RHGATVILLGRTEEKLEAVYDEIEAAGGPQPA-IIPLDLLTATPQNYQQLAD 84 (247)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HCCCcEEEEeCCHHHHHHHHHHHHhcCCCCce-EEEecccCCCHHHHHHHHH
Confidence 46899999999999999999999 68999999999864310 1123566 7788886 5565555544
Q ss_pred hccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|.|||+|+... ..+...+++|+.++.++++++...+. ..+..+|+++||.
T Consensus 85 ~~~~~~~~id~vi~~Ag~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~l~-~~~~~~iv~~ss~ 153 (247)
T PRK08945 85 TIEEQFGRLDGVLHNAGLLGELGPMEQQDPEVWQDVMQVNVNATFMLTQALLPLLL-KSPAASLVFTSSS 153 (247)
T ss_pred HHHHHhCCCCEEEECCcccCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHH-hCCCCEEEEEccH
Confidence 3321 3899999987531 13455778999998888877653210 1135678887764
No 234
>PRK06125 short chain dehydrogenase; Provisional
Probab=99.39 E-value=1.4e-11 Score=100.27 Aligned_cols=118 Identities=14% Similarity=0.006 Sum_probs=87.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C---CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F---PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~---~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
..|+++||||+|+||++++++|+ +.|++|++++|++.+.. . ...+++ ++.+|++|++++.+.++..
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~-~~~~D~~~~~~~~~~~~~~ 79 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFA-----AEGCHLHLVARDADALEALAADLRAAHGVDVA-VHALDLSSPEAREQLAAEA 79 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhhcCCceE-EEEecCCCHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999765311 0 124577 8899999999998888776
Q ss_pred ccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. +|.+||+++... .++...+++|+.+...+.+++...+... +-.+++++||
T Consensus 80 g~-id~lv~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~-~~g~iv~iss 140 (259)
T PRK06125 80 GD-IDILVNNAGAIPGGGLDDVDDAAWRAGWELKVFGYIDLTRLAYPRMKAR-GSGVIVNVIG 140 (259)
T ss_pred CC-CCEEEECCCCCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHc-CCcEEEEecC
Confidence 54 899999997532 1345667889998888777765432101 1246677665
No 235
>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.39 E-value=8.6e-12 Score=102.57 Aligned_cols=118 Identities=10% Similarity=0.005 Sum_probs=84.5
Q ss_pred CCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CC--CCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF--PTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|++|||||++ .||++++++|+ ++|++|+++.|+.... .. ...... .+.+|++|++++.+.++.+
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la-----~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~-~~~~Dv~d~~~v~~~~~~~ 79 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLA-----AQGAELAFTYQGEALGKRVKPLAESLGSDF-VLPCDVEDIASVDAVFEAL 79 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHH-----hCCCEEEEecCchHHHHHHHHHHHhcCCce-EEeCCCCCHHHHHHHHHHH
Confidence 468999999997 99999999999 7999999988864210 00 112235 7899999999887777654
Q ss_pred cc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 80 SQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.. .+|++||+|+... .+|...+++|+.++.++++++...+.. + .+++.+||.
T Consensus 80 ~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~m~~--~-G~Iv~isS~ 147 (271)
T PRK06505 80 EKKWGKLDFVVHAIGFSDKNELKGRYADTTRENFSRTMVISCFSFTEIAKRAAKLMPD--G-GSMLTLTYG 147 (271)
T ss_pred HHHhCCCCEEEECCccCCCccccCChhhcCHHHHHHHHhhhhhhHHHHHHHHHHhhcc--C-ceEEEEcCC
Confidence 21 3899999998531 134556789999988888877665321 1 466766653
No 236
>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.39 E-value=1.2e-11 Score=100.93 Aligned_cols=124 Identities=8% Similarity=-0.001 Sum_probs=89.2
Q ss_pred CccccCCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHH
Q 028258 1 MEKQDQNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 1 ~~~~~~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~ 72 (211)
|-++..+.+|+++||||+ +.||++++++|+ ++|++|++++|+..... ....... ++.+|++|++++
T Consensus 2 ~~~~~~~~~k~~lItGas~g~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~v 75 (258)
T PRK07533 2 MQPLLPLAGKRGLVVGIANEQSIAWGCARAFR-----ALGAELAVTYLNDKARPYVEPLAEELDAPI-FLPLDVREPGQL 75 (258)
T ss_pred CCcccccCCCEEEEECCCCCCcHHHHHHHHHH-----HcCCEEEEEeCChhhHHHHHHHHHhhccce-EEecCcCCHHHH
Confidence 445555567999999998 599999999999 68999999888753210 0113356 789999999988
Q ss_pred HHHHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 73 ALKLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 73 ~~~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+.++.+.. .+|++||+|+... .++...+++|+.++..+.+.+...+. .-.+++++||
T Consensus 76 ~~~~~~~~~~~g~ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~---~~g~Ii~iss 149 (258)
T PRK07533 76 EAVFARIAEEWGRLDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMT---NGGSLLTMSY 149 (258)
T ss_pred HHHHHHHHHHcCCCCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhc---cCCEEEEEec
Confidence 877765421 3899999997532 13456789999999888887766532 1135666665
No 237
>KOG1221 consensus Acyl-CoA reductase [Lipid transport and metabolism]
Probab=99.37 E-value=1.8e-11 Score=106.22 Aligned_cols=121 Identities=20% Similarity=0.194 Sum_probs=84.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------CC--------------CCCCceeEEEee
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------WF--------------PTALVDRYITFD 65 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~~--------------~~~~~~~~i~~D 65 (211)
..|+|||||||||+|+-+++.|+...+ +--+++.+.|..... +. ...++. .+.+|
T Consensus 11 ~~k~i~vTG~tGFlgKVliEklLr~~p--~v~~IYlLiR~k~g~~~~~Rl~~~~~~~lF~~l~~~~p~~l~Kv~-pi~GD 87 (467)
T KOG1221|consen 11 KNKTIFVTGATGFLGKVLIEKLLRTTP--DVKRIYLLIRAKKGKAAQERLRTELKDPLFEVLKEKKPEALEKVV-PIAGD 87 (467)
T ss_pred CCCeEEEEcccchhHHHHHHHHHhcCc--CcceEEEEEecCCCCCHHHHHHHHHhhhHHHHHHhhCccceecce-ecccc
Confidence 368999999999999999999994211 112588888855421 00 124567 88999
Q ss_pred CCCHHH-HH-HHHHhcccccceEEeecccCCchhH--HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 66 ALDPTD-TA-LKLSLISQEITNLFWVPLQVQESEE--VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 66 l~d~~~-~~-~~~~~~~~~~~~v~~~a~~~~~~~~--~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.+++. +. +-++.+.+.+++|+|+|+....++. ....+|..|++++++.+++. .+++.++++|++-
T Consensus 88 i~~~~LGis~~D~~~l~~eV~ivih~AAtvrFde~l~~al~iNt~Gt~~~l~lak~~----~~l~~~vhVSTAy 157 (467)
T KOG1221|consen 88 ISEPDLGISESDLRTLADEVNIVIHSAATVRFDEPLDVALGINTRGTRNVLQLAKEM----VKLKALVHVSTAY 157 (467)
T ss_pred ccCcccCCChHHHHHHHhcCCEEEEeeeeeccchhhhhhhhhhhHhHHHHHHHHHHh----hhhheEEEeehhh
Confidence 998741 11 1111111238999999998765433 34688999999999999986 5789999998753
No 238
>PRK09009 C factor cell-cell signaling protein; Provisional
Probab=99.37 E-value=6.2e-11 Score=94.91 Aligned_cols=115 Identities=17% Similarity=0.110 Sum_probs=81.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++++||||||+||++++++|+ ++ ++.|....|+.... ....++. ++++|++|.+++.+..+.+.. +|++|
T Consensus 1 ~~vlItGas~gIG~~ia~~l~-----~~~~~~~v~~~~~~~~~~-~~~~~~~-~~~~Dls~~~~~~~~~~~~~~-id~li 72 (235)
T PRK09009 1 MNILIVGGSGGIGKAMVKQLL-----ERYPDATVHATYRHHKPD-FQHDNVQ-WHALDVTDEAEIKQLSEQFTQ-LDWLI 72 (235)
T ss_pred CEEEEECCCChHHHHHHHHHH-----HhCCCCEEEEEccCCccc-cccCceE-EEEecCCCHHHHHHHHHhcCC-CCEEE
Confidence 379999999999999999999 44 46666666654432 2245778 999999999988777666654 89999
Q ss_pred eecccCCc---------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 88 WVPLQVQE---------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 88 ~~a~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
|+++.... .+...+.+|+.+...+.+.+...+... +..+++++|+
T Consensus 73 ~~aG~~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~-~~~~i~~iss 132 (235)
T PRK09009 73 NCVGMLHTQDKGPEKSLQALDADFFLQNITLNTLPSLLLAKHFTPKLKQS-ESAKFAVISA 132 (235)
T ss_pred ECCccccccccCcccccccCCHHHHHHHHHHHhHHHHHHHHHHHhhcccc-CCceEEEEee
Confidence 99986421 123456888888877777776543211 2245666654
No 239
>TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative. This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found.
Probab=99.37 E-value=9.2e-12 Score=99.91 Aligned_cols=117 Identities=13% Similarity=0.066 Sum_probs=81.9
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C--CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W--FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
++||||+|+||.+++++|+ ++|++|+++.|+.... . ....+++ ++.+|++|++++.++++...
T Consensus 1 vlItGas~giG~~~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~~~~~~~~~~~~~ 74 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLA-----ADGFEICVHYHSGRSDAESVVSAIQAQGGNAR-LLQFDVADRVACRTLLEADIAEH 74 (239)
T ss_pred CEEeCCCchHHHHHHHHHH-----HCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEE-EEEccCCCHHHHHHHHHHHHHHc
Confidence 5899999999999999999 6899999888764321 0 0134678 89999999998877765431
Q ss_pred cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHH-hcCCCCCCceEEEEeecCe
Q 028258 81 QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLV-SSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~-~~~~~~~~~~~~~~~s~~~ 135 (211)
..++.++|+++... .++...+++|+.++.++++++. ..+. ..+..+|+++||..
T Consensus 75 ~~i~~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~-~~~~~~iv~vsS~~ 138 (239)
T TIGR01831 75 GAYYGVVLNAGITRDAAFPALSEEDWDIVIHTNLDGFYNVIHPCTMPMIR-ARQGGRIITLASVS 138 (239)
T ss_pred CCCCEEEECCCCCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHh-hcCCeEEEEEcchh
Confidence 12788999987522 1345577899999888887653 1100 01235778777743
No 240
>PRK07791 short chain dehydrogenase; Provisional
Probab=99.37 E-value=1.5e-11 Score=101.80 Aligned_cols=125 Identities=11% Similarity=-0.103 Sum_probs=87.5
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCCC-------CCCCCceeEEEeeCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPGW-------FPTALVDRYITFDAL 67 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~~-------~~~~~~~~~i~~Dl~ 67 (211)
|..+++|++|||||+++||++++++|+ +.|++|++++|+. .... .....+. ++.+|++
T Consensus 1 m~~l~~k~~lITGas~GIG~aia~~la-----~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~ 74 (286)
T PRK07791 1 MGLLDGRVVIVTGAGGGIGRAHALAFA-----AEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAV-ANGDDIA 74 (286)
T ss_pred CCccCCCEEEEECCCchHHHHHHHHHH-----HCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceE-EEeCCCC
Confidence 334557999999999999999999999 6899999888764 1100 0123567 8899999
Q ss_pred CHHHHHHHHHhcc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCC-C----CCceEEEE
Q 028258 68 DPTDTALKLSLIS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSG-R----SRLRHVAL 130 (211)
Q Consensus 68 d~~~~~~~~~~~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~-~----~~~~~~~~ 130 (211)
|++++.+.++.+. ..+|++||+|+... .++...+++|+.++..+++++...+.. . ..-.+|++
T Consensus 75 ~~~~v~~~~~~~~~~~g~id~lv~nAG~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~~~~g~Iv~ 154 (286)
T PRK07791 75 DWDGAANLVDAAVETFGGLDVLVNNAGILRDRMIANMSEEEWDAVIAVHLKGHFATLRHAAAYWRAESKAGRAVDARIIN 154 (286)
T ss_pred CHHHHHHHHHHHHHhcCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHccHHHHHHHHHHHHHHHHhcccCCCCCcEEEE
Confidence 9998877776542 13899999998632 145567899999988887776543200 0 00146777
Q ss_pred eecC
Q 028258 131 LTGT 134 (211)
Q Consensus 131 ~s~~ 134 (211)
+||.
T Consensus 155 isS~ 158 (286)
T PRK07791 155 TSSG 158 (286)
T ss_pred eCch
Confidence 7764
No 241
>PRK12367 short chain dehydrogenase; Provisional
Probab=99.36 E-value=6.1e-12 Score=102.10 Aligned_cols=106 Identities=15% Similarity=0.090 Sum_probs=80.6
Q ss_pred cccCC--CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 3 KQDQN--PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 3 ~~~~~--~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
||+|. ++|+++||||||+||++++++|+ ++|++|++++|++.. .. ....... .+.+|++|.+++.+.+..
T Consensus 6 ~~~~~~l~~k~~lITGas~gIG~ala~~l~-----~~G~~Vi~~~r~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 79 (245)
T PRK12367 6 PMAQSTWQGKRIGITGASGALGKALTKAFR-----AKGAKVIGLTHSKINNSESNDESPNE-WIKWECGKEESLDKQLAS 79 (245)
T ss_pred hhhHHhhCCCEEEEEcCCcHHHHHHHHHHH-----HCCCEEEEEECCchhhhhhhccCCCe-EEEeeCCCHHHHHHhcCC
Confidence 44433 46899999999999999999999 689999999997622 11 1112235 789999999888776643
Q ss_pred cccccceEEeecccCC------chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ------ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~------~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|++||+|+... .++.+.+++|+.++.++++++...
T Consensus 80 ----iDilVnnAG~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~ 121 (245)
T PRK12367 80 ----LDVLILNHGINPGGRQDPENINKALEINALSSWRLLELFEDI 121 (245)
T ss_pred ----CCEEEECCccCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHH
Confidence 789999998632 245667899999999999887664
No 242
>smart00822 PKS_KR This enzymatic domain is part of bacterial polyketide synthases and catalyses the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group.
Probab=99.36 E-value=1.7e-11 Score=92.90 Aligned_cols=114 Identities=19% Similarity=0.102 Sum_probs=83.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC----------CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF----------PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~----------~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
++++||||+|+||.+++++|+ ++|+ .|+++.|++..... ...++. ++.+|+++++.+.+.+..
T Consensus 1 ~~~li~Ga~~~iG~~~~~~l~-----~~g~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~ 74 (180)
T smart00822 1 GTYLITGGLGGLGLELARWLA-----ERGARHLVLLSRSGPDAPGAAELLAELEALGAEVT-VVACDVADRAALAAALAA 74 (180)
T ss_pred CEEEEEcCCChHHHHHHHHHH-----HhhCCeEEEEeCCCCCCccHHHHHHHHHhcCCeEE-EEECCCCCHHHHHHHHHH
Confidence 579999999999999999999 5765 68888887553210 123566 789999999887777665
Q ss_pred cc---cccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 IS---QEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+. ..+|.++|+++... .++...+++|+.++.++++++... +..+++++||.
T Consensus 75 ~~~~~~~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~-----~~~~ii~~ss~ 137 (180)
T smart00822 75 IPARLGPLRGVIHAAGVLDDGLLANLTPERFAAVLAPKVDGAWNLHELTRDL-----PLDFFVLFSSV 137 (180)
T ss_pred HHHHcCCeeEEEEccccCCccccccCCHHHHHHhhchHhHHHHHHHHHhccC-----CcceEEEEccH
Confidence 42 12789999997532 134456789999999999988654 45677777663
No 243
>COG0702 Predicted nucleoside-diphosphate-sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism]
Probab=99.36 E-value=1.3e-11 Score=100.78 Aligned_cols=147 Identities=17% Similarity=0.149 Sum_probs=93.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
++||||||||++|++++++|+ +.|++|.++.|++........+++ +...|+.++..+...+++ ++.++++
T Consensus 1 ~~ilV~GatG~~G~~~~~~L~-----~~~~~v~~~~r~~~~~~~~~~~v~-~~~~d~~~~~~l~~a~~G----~~~~~~i 70 (275)
T COG0702 1 MKILVTGATGFVGGAVVRELL-----ARGHEVRAAVRNPEAAAALAGGVE-VVLGDLRDPKSLVAGAKG----VDGVLLI 70 (275)
T ss_pred CeEEEEecccchHHHHHHHHH-----hCCCEEEEEEeCHHHHHhhcCCcE-EEEeccCCHhHHHHHhcc----ccEEEEE
Confidence 359999999999999999999 679999999999875321127889 999999999999999988 4666666
Q ss_pred cccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCCCc
Q 028258 90 PLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFPNF 169 (211)
Q Consensus 90 a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~~~ 169 (211)
........ ........ ++++..+.. ...++++++.|.... +..++ ......
T Consensus 71 ~~~~~~~~-~~~~~~~~---~~~~~a~~a---~~~~~~~~~~s~~~~---------------------~~~~~-~~~~~~ 121 (275)
T COG0702 71 SGLLDGSD-AFRAVQVT---AVVRAAEAA---GAGVKHGVSLSVLGA---------------------DAASP-SALARA 121 (275)
T ss_pred eccccccc-chhHHHHH---HHHHHHHHh---cCCceEEEEeccCCC---------------------CCCCc-cHHHHH
Confidence 65443111 12222222 344444443 224566666544211 00111 000112
Q ss_pred chhHHHHHhhcCCCceEEEecCCceEec
Q 028258 170 YYELEDVSASYSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 170 ~~~~e~~l~~~~~~~~~~i~Rp~~i~G~ 197 (211)
....|+.+. ..+++++++||..+|..
T Consensus 122 ~~~~e~~l~--~sg~~~t~lr~~~~~~~ 147 (275)
T COG0702 122 KAAVEAALR--SSGIPYTTLRRAAFYLG 147 (275)
T ss_pred HHHHHHHHH--hcCCCeEEEecCeeeec
Confidence 233455554 48999999996666654
No 244
>TIGR01289 LPOR light-dependent protochlorophyllide reductase. This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.
Probab=99.35 E-value=9.3e-12 Score=104.48 Aligned_cols=125 Identities=14% Similarity=0.124 Sum_probs=90.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|+|+++|||||++||.+++++|+ ++| ++|+++.|+..+.. .....++ ++.+|++|.+++...++.+
T Consensus 2 ~~k~vlITGas~GIG~aia~~L~-----~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 75 (314)
T TIGR01289 2 QKPTVIITGASSGLGLYAAKALA-----ATGEWHVIMACRDFLKAEQAAKSLGMPKDSYT-IMHLDLGSLDSVRQFVQQF 75 (314)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEcCCCCHHHHHHHHHHH
Confidence 47899999999999999999999 689 99999998764310 1124567 8899999999887777654
Q ss_pred c---cccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCC-CceEEEEeecCeeee
Q 028258 80 S---QEITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRS-RLRHVALLTGTKHYM 138 (211)
Q Consensus 80 ~---~~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~-~~~~~~~~s~~~~y~ 138 (211)
. ..+|++||+|+... ..+...+++|+.++..+++.+...+.... +..+|+++||...+.
T Consensus 76 ~~~~~~iD~lI~nAG~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~l~~m~~~~~~~g~IV~vsS~~~~~ 148 (314)
T TIGR01289 76 RESGRPLDALVCNAAVYFPTAKEPRFTADGFELSVGTNHLGHFLLCNLLLDDLKNSPNKDKRLIIVGSITGNT 148 (314)
T ss_pred HHhCCCCCEEEECCCccccCccccccCHHHHHHHHhhhhhHHHHHHHHHHHHHHhCCCCCCeEEEEecCcccc
Confidence 2 13899999997521 12345678999887777666654321111 135889998876653
No 245
>PRK07370 enoyl-(acyl carrier protein) reductase; Validated
Probab=99.35 E-value=3.5e-11 Score=98.12 Aligned_cols=120 Identities=14% Similarity=0.052 Sum_probs=86.2
Q ss_pred CCCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------C--CCCCceeEEEeeCCCHHHHHH
Q 028258 6 QNPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------F--PTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 6 ~~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~--~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
.+++|+++||||+ +.||++++++|+ +.|++|++..|+..... . ....+. ++.+|++|++++.+
T Consensus 3 ~l~~k~~lItGas~~~GIG~aia~~la-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dl~d~~~v~~ 76 (258)
T PRK07370 3 DLTGKKALVTGIANNRSIAWGIAQQLH-----AAGAELGITYLPDEKGRFEKKVRELTEPLNPSL-FLPCDVQDDAQIEE 76 (258)
T ss_pred ccCCcEEEEeCCCCCCchHHHHHHHHH-----HCCCEEEEEecCcccchHHHHHHHHHhccCcce-EeecCcCCHHHHHH
Confidence 3457899999986 899999999999 69999987766432110 0 113456 88999999999888
Q ss_pred HHHhccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.++.+.. .+|++||+++... ..+...+++|+.++..+.+++...+.. -.+|+++||.
T Consensus 77 ~~~~~~~~~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~---~g~Iv~isS~ 149 (258)
T PRK07370 77 TFETIKQKWGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSE---GGSIVTLTYL 149 (258)
T ss_pred HHHHHHHHcCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhh---CCeEEEEecc
Confidence 7766531 3899999997531 134556789999988888877665321 1467777763
No 246
>KOG2865 consensus NADH:ubiquinone oxidoreductase, NDUFA9/39kDa subunit [Energy production and conversion]
Probab=99.35 E-value=3.7e-12 Score=103.00 Aligned_cols=151 Identities=15% Similarity=0.037 Sum_probs=109.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
.+-|+|||||+|+.+|+.|. +.|-+|++--|..+... -...++- +...|+.|++++..+++-. .
T Consensus 63 VaTVFGAtGFlGryvvnkla-----k~GSQviiPyR~d~~~~r~lkvmGdLGQvl-~~~fd~~DedSIr~vvk~s----N 132 (391)
T KOG2865|consen 63 VATVFGATGFLGRYVVNKLA-----KMGSQVIIPYRGDEYDPRHLKVMGDLGQVL-FMKFDLRDEDSIRAVVKHS----N 132 (391)
T ss_pred EEEEecccccccHHHHHHHh-----hcCCeEEEeccCCccchhheeeccccccee-eeccCCCCHHHHHHHHHhC----c
Confidence 68899999999999999999 68999998888654321 1236677 8899999999999998863 5
Q ss_pred eEEeecccCCchh-HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCC
Q 028258 85 NLFWVPLQVQESE-EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSR 163 (211)
Q Consensus 85 ~v~~~a~~~~~~~-~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~ 163 (211)
+||++.+..-++. -...++|+.+.+.+...|++. ++.+|+++|+...- +...+.
T Consensus 133 VVINLIGrd~eTknf~f~Dvn~~~aerlAricke~-----GVerfIhvS~Lgan-------------------v~s~Sr- 187 (391)
T KOG2865|consen 133 VVINLIGRDYETKNFSFEDVNVHIAERLARICKEA-----GVERFIHVSCLGAN-------------------VKSPSR- 187 (391)
T ss_pred EEEEeeccccccCCcccccccchHHHHHHHHHHhh-----Chhheeehhhcccc-------------------ccChHH-
Confidence 7888887654322 235588999999999999987 78999998763210 000000
Q ss_pred CCCCCcchhHHHHHhhcCCCceEEEecCCceEecCCC
Q 028258 164 LPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASPR 200 (211)
Q Consensus 164 ~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~ 200 (211)
.-...+..|+.+++ .--..+|+||+.|||..++
T Consensus 188 --~LrsK~~gE~aVrd--afPeAtIirPa~iyG~eDr 220 (391)
T KOG2865|consen 188 --MLRSKAAGEEAVRD--AFPEATIIRPADIYGTEDR 220 (391)
T ss_pred --HHHhhhhhHHHHHh--hCCcceeechhhhcccchh
Confidence 01233455666654 2337899999999998764
No 247
>KOG1372 consensus GDP-mannose 4,6 dehydratase [Carbohydrate transport and metabolism]
Probab=99.35 E-value=5.5e-12 Score=100.16 Aligned_cols=143 Identities=22% Similarity=0.177 Sum_probs=106.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-------------CCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-------------PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-------------~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+|.+||||-||.-|++|++.|+ .+||+|.++.|+.+.+.. ...... ...+|++|...+.+.
T Consensus 28 rkvALITGItGQDGSYLaEfLL-----~KgYeVHGiiRRsSsFNT~RIeHlY~nP~~h~~~~mk-LHYgDmTDss~L~k~ 101 (376)
T KOG1372|consen 28 RKVALITGITGQDGSYLAEFLL-----SKGYEVHGIIRRSSSFNTARIEHLYSNPHTHNGASMK-LHYGDMTDSSCLIKL 101 (376)
T ss_pred ceEEEEecccCCCchHHHHHHH-----hCCceeeEEEeeccccchhhhhhhhcCchhcccceeE-EeeccccchHHHHHH
Confidence 5689999999999999999999 799999999998775310 124456 778999999999999
Q ss_pred HHhcccccceEEeecccCCc-----hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCC
Q 028258 76 LSLISQEITNLFWVPLQVQE-----SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQL 150 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~~-----~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~ 150 (211)
+..++ ++-|+|+|+++.. -++-+.++...|+..|+++++... -..-.+|...|++..||..
T Consensus 102 I~~ik--PtEiYnLaAQSHVkvSFdlpeYTAeVdavGtLRlLdAi~~c~--l~~~VrfYQAstSElyGkv---------- 167 (376)
T KOG1372|consen 102 ISTIK--PTEVYNLAAQSHVKVSFDLPEYTAEVDAVGTLRLLDAIRACR--LTEKVRFYQASTSELYGKV---------- 167 (376)
T ss_pred HhccC--chhhhhhhhhcceEEEeecccceeeccchhhhhHHHHHHhcC--cccceeEEecccHhhcccc----------
Confidence 99887 7899999988542 234455778889999999998651 1112455566677777642
Q ss_pred CCCCCCCcCCCCCCCCCCcchhHHH
Q 028258 151 MPYEVPFKEDSSRLPFPNFYYELED 175 (211)
Q Consensus 151 ~~~~~~~~e~~~~~~~~~~~~~~e~ 175 (211)
.+.|..|.+|.. |.+.|+..|
T Consensus 168 --~e~PQsE~TPFy--PRSPYa~aK 188 (376)
T KOG1372|consen 168 --QEIPQSETTPFY--PRSPYAAAK 188 (376)
T ss_pred --cCCCcccCCCCC--CCChhHHhh
Confidence 367888988864 444455444
No 248
>PLN02780 ketoreductase/ oxidoreductase
Probab=99.35 E-value=2.6e-11 Score=102.12 Aligned_cols=121 Identities=15% Similarity=0.006 Sum_probs=82.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCC--HHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALD--PTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d--~~~~~~~~~ 77 (211)
++.++||||||+||++++++|+ ++|++|++++|++++.. . ....+. .+.+|+++ .+.+.+..+
T Consensus 53 g~~~lITGAs~GIG~alA~~La-----~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~-~~~~Dl~~~~~~~~~~l~~ 126 (320)
T PLN02780 53 GSWALVTGPTDGIGKGFAFQLA-----RKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIK-TVVVDFSGDIDEGVKRIKE 126 (320)
T ss_pred CCEEEEeCCCcHHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEE-EEEEECCCCcHHHHHHHHH
Confidence 5899999999999999999999 68999999999875421 0 013466 78899985 233333333
Q ss_pred hccc-ccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 78 LISQ-EITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 78 ~~~~-~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.+.. ++|++||+|+.... ++...+++|+.++.++.+++...+... +..+++++||...
T Consensus 127 ~~~~~didilVnnAG~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~-~~g~IV~iSS~a~ 196 (320)
T PLN02780 127 TIEGLDVGVLINNVGVSYPYARFFHEVDEELLKNLIKVNVEGTTKVTQAVLPGMLKR-KKGAIINIGSGAA 196 (320)
T ss_pred HhcCCCccEEEEecCcCCCCCcccccCCHHHHHHHHHHhHHHHHHHHHHHHHHHHhc-CCcEEEEEechhh
Confidence 3221 26799999976311 233467899999888888765432101 2357888887543
No 249
>PRK08340 glucose-1-dehydrogenase; Provisional
Probab=99.35 E-value=2.2e-11 Score=99.12 Aligned_cols=119 Identities=13% Similarity=0.025 Sum_probs=79.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
++|||||+|+||++++++|+ ++|++|++++|++.... .....+. ++.+|++|++++.+.++.+. .
T Consensus 2 ~vlItGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~-~~~~Dv~d~~~~~~~~~~~~~~~g 75 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELL-----KKGARVVISSRNEENLEKALKELKEYGEVY-AVKADLSDKDDLKNLVKEAWELLG 75 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHhcCCce-EEEcCCCCHHHHHHHHHHHHHhcC
Confidence 69999999999999999999 68999999999764311 0123577 89999999998887776542 1
Q ss_pred ccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 EITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 ~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|++||+++... .++.+.+.+|+.+...+...+...+....+-.+|+++||..
T Consensus 76 ~id~li~naG~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~~~~~~~~g~iv~isS~~ 140 (259)
T PRK08340 76 GIDALVWNAGNVRCEPCMLHEAGYSDWLEAALLHLVAPGYLTTLLIQAWLEKKMKGVLVYLSSVS 140 (259)
T ss_pred CCCEEEECCCCCCCCccccccccHHHHHHHHhhcchHHHHHHHHHHHHHHhcCCCCEEEEEeCcc
Confidence 3899999998531 02333456676654444433222100001235788887754
No 250
>PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.34 E-value=4.2e-11 Score=100.13 Aligned_cols=104 Identities=10% Similarity=-0.116 Sum_probs=79.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC-CC-------CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP-GW-------FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~-~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+++||||+|+||++++++|+ ++|++|++.+|+... .. .....+. ++.+|++|++.+.+.++.+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~-----~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~-~~~~Dv~d~~~~~~~~~~~ 84 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLA-----RLGATVVVNDVASALDASDVLDEIRAAGAKAV-AVAGDISQRATADELVATA 84 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHH-----HCCCEEEEecCCchhHHHHHHHHHHhcCCeEE-EEeCCCCCHHHHHHHHHHH
Confidence 46899999999999999999999 689999988875432 10 0134577 8899999998887766543
Q ss_pred c--cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHh
Q 028258 80 S--QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 80 ~--~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
. ..+|++||+|+.... ++...+++|+.++.++++++..
T Consensus 85 ~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~vn~~g~~~l~~~~~~ 133 (306)
T PRK07792 85 VGLGGLDIVVNNAGITRDRMLFNMSDEEWDAVIAVHLRGHFLLTRNAAA 133 (306)
T ss_pred HHhCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHH
Confidence 1 138999999986431 3456778999999898887653
No 251
>TIGR02685 pter_reduc_Leis pteridine reductase. Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family.
Probab=99.34 E-value=3.6e-11 Score=98.38 Aligned_cols=102 Identities=12% Similarity=0.017 Sum_probs=72.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC-----C---CCCCceeEEEeeCCCHHHHH----HHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW-----F---PTALVDRYITFDALDPTDTA----LKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~-----~---~~~~~~~~i~~Dl~d~~~~~----~~~ 76 (211)
++++||||+|+||++++++|+ ++|++|+++.|+.. ... . ....+. ++.+|++|.+++. +.+
T Consensus 2 ~~~lITGas~gIG~~~a~~l~-----~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~~~~~~~~~~ 75 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALH-----QEGYRVVLHYHRSAAAASTLAAELNARRPNSAV-TCQADLSNSATLFSRCEAII 75 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHH-----hCCCeEEEEcCCcHHHHHHHHHHHHhccCCceE-EEEccCCCchhhHHHHHHHH
Confidence 679999999999999999999 69999998876532 210 0 123456 7899999987543 333
Q ss_pred Hh----cccccceEEeecccCCc--------------------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SL----ISQEITNLFWVPLQVQE--------------------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~----~~~~~~~v~~~a~~~~~--------------------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+. .. .+|+|||+|+.... .+.+.+++|+.+...+.+++...
T Consensus 76 ~~~~~~~g-~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~~~~~~ 140 (267)
T TIGR02685 76 DACFRAFG-RCDVLVNNASAFYPTPLLRGDAGEGVGDKKSLEVQVAELFGSNAIAPYFLIKAFAQR 140 (267)
T ss_pred HHHHHccC-CceEEEECCccCCCCcccccccccccccchhhHHHHHHHHHhhhHHHHHHHHHHHHH
Confidence 22 22 28999999975221 13356789999888888876654
No 252
>PRK06940 short chain dehydrogenase; Provisional
Probab=99.33 E-value=1.3e-11 Score=101.56 Aligned_cols=104 Identities=17% Similarity=0.017 Sum_probs=81.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--CCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--PTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+|+++|||| |+||++++++|. +|++|++++|+..+.. . ....+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~k~~lItGa-~gIG~~la~~l~------~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dv~d~~~i~~~~~~~~ 72 (275)
T PRK06940 1 MKEVVVVIGA-GGIGQAIARRVG------AGKKVLLADYNEENLEAAAKTLREAGFDVS-TQEVDVSSRESVKALAATAQ 72 (275)
T ss_pred CCCEEEEECC-ChHHHHHHHHHh------CCCEEEEEeCCHHHHHHHHHHHHhcCCeEE-EEEeecCCHHHHHHHHHHHH
Confidence 6789999998 699999999996 5899999999754311 0 123577 88999999998887776542
Q ss_pred --cccceEEeecccCC--chhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 81 --QEITNLFWVPLQVQ--ESEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 81 --~~~~~v~~~a~~~~--~~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
..+|++||+|+... .++...+++|+.++.++++++...+
T Consensus 73 ~~g~id~li~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m 115 (275)
T PRK06940 73 TLGPVTGLVHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVI 115 (275)
T ss_pred hcCCCCEEEECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHH
Confidence 13899999998743 3577788999999999999887653
No 253
>PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.33 E-value=4.2e-11 Score=97.43 Aligned_cols=122 Identities=11% Similarity=0.025 Sum_probs=83.0
Q ss_pred CCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--------C----------CCCCCCceeEEEee
Q 028258 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------G----------WFPTALVDRYITFD 65 (211)
Q Consensus 6 ~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--------~----------~~~~~~~~~~i~~D 65 (211)
..++|++||||||| .||++++++|+ +.|++|+++.|.... . ......+. ++.+|
T Consensus 3 ~l~~k~vlVtGas~~~giG~~~a~~l~-----~~G~~vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~D 76 (256)
T PRK12859 3 QLKNKVAVVTGVSRLDGIGAAICKELA-----EAGADIFFTYWTAYDKEMPWGVDQDEQIQLQEELLKNGVKVS-SMELD 76 (256)
T ss_pred CcCCcEEEEECCCCCCChHHHHHHHHH-----HCCCeEEEEecccccccccccccHHHHHHHHHHHHhcCCeEE-EEEcC
Confidence 44569999999995 89999999999 689998887542110 0 00123567 88999
Q ss_pred CCCHHHHHHHHHhccc---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 66 ALDPTDTALKLSLISQ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 66 l~d~~~~~~~~~~~~~---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
++|.+++.+++..+.. .+|++||+++.... .+...+++|+.+...+..++...+... .-.+|+++||
T Consensus 77 ~~~~~~i~~~~~~~~~~~g~id~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~g~iv~isS 155 (256)
T PRK12859 77 LTQNDAPKELLNKVTEQLGYPHILVNNAAYSTNNDFSNLTAEELDKHYMVNVRATTLLSSQFARGFDKK-SGGRIINMTS 155 (256)
T ss_pred CCCHHHHHHHHHHHHHHcCCCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhc-CCeEEEEEcc
Confidence 9999988777765421 27999999976321 344567889988777765554332101 2357888877
Q ss_pred C
Q 028258 134 T 134 (211)
Q Consensus 134 ~ 134 (211)
.
T Consensus 156 ~ 156 (256)
T PRK12859 156 G 156 (256)
T ss_pred c
Confidence 4
No 254
>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.33 E-value=7.7e-11 Score=96.49 Aligned_cols=120 Identities=8% Similarity=-0.077 Sum_probs=83.5
Q ss_pred CCCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C---CCCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G---WFPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~---~~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
++.+|+++||||++ .||++++++|+ ++|++|+++.|+... . ....+... .+.+|++|++++.+.++
T Consensus 3 ~l~~k~~lITGas~~~GIG~aia~~la-----~~G~~vil~~r~~~~~~~~~~~~~~~~~~~-~~~~Dl~~~~~v~~~~~ 76 (262)
T PRK07984 3 FLSGKRILVTGVASKLSIAYGIAQAMH-----REGAELAFTYQNDKLKGRVEEFAAQLGSDI-VLPCDVAEDASIDAMFA 76 (262)
T ss_pred ccCCCEEEEeCCCCCccHHHHHHHHHH-----HCCCEEEEEecchhHHHHHHHHHhccCCce-EeecCCCCHHHHHHHHH
Confidence 34568999999985 99999999999 699999988886311 0 01124466 78999999999888876
Q ss_pred hccc---ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|.+||+|+.... .+...+++|+.+...+.+++...+. . + .+++++||.
T Consensus 77 ~~~~~~g~iD~linnAg~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~-~-~-g~Iv~iss~ 147 (262)
T PRK07984 77 ELGKVWPKFDGFVHSIGFAPGDQLDGDYVNAVTREGFKIAHDISSYSFVAMAKACRSMLN-P-G-SALLTLSYL 147 (262)
T ss_pred HHHhhcCCCCEEEECCccCCccccCCcchhhcCHHHHHHHhhhhhHHHHHHHHHHHHHhc-C-C-cEEEEEecC
Confidence 5431 38999999975311 2334568898887777777654321 1 1 356676653
No 255
>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.32 E-value=1e-10 Score=95.44 Aligned_cols=118 Identities=11% Similarity=-0.028 Sum_probs=84.3
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---C-----CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---W-----FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~-----~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+|+++||||+ +.||++++++|+ ++|++|+++.|+.... . ....++. ++.+|++|++++.+.++
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la-----~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 79 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLH-----NAGAKLVFTYAGERLEKEVRELADTLEGQESL-LLPCDVTSDEEITACFE 79 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEecCcccchHHHHHHHHHcCCCceE-EEecCCCCHHHHHHHHH
Confidence 46899999997 899999999999 6999999887753211 0 1124577 88999999998887776
Q ss_pred hcc---cccceEEeecccCC------c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LIS---QEITNLFWVPLQVQ------E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~---~~~~~v~~~a~~~~------~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+. ..+|.+||+++... . .+...+++|..++..+.+++...+. .-.+|+++||.
T Consensus 80 ~~~~~~g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~---~~g~Iv~isS~ 149 (257)
T PRK08594 80 TIKEEVGVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMT---EGGSIVTLTYL 149 (257)
T ss_pred HHHHhCCCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcc---cCceEEEEccc
Confidence 542 13899999987531 0 2344568898888777777766531 11467777764
No 256
>PRK06484 short chain dehydrogenase; Validated
Probab=99.32 E-value=2.8e-11 Score=107.94 Aligned_cols=121 Identities=13% Similarity=-0.027 Sum_probs=88.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcc---
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLIS--- 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--- 80 (211)
.+|++|||||+++||.+++++|+ ++|++|++++|+.+... ....++. ++.+|++|++++.++++.+.
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~-----~~G~~V~~~~r~~~~~~~~~~~~~~~~~-~~~~D~~~~~~~~~~~~~~~~~~ 77 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFA-----RAGDQVVVADRNVERARERADSLGPDHH-ALAMDVSDEAQIREGFEQLHREF 77 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHhCCcee-EEEeccCCHHHHHHHHHHHHHHh
Confidence 46899999999999999999999 68999999999765421 0124567 78999999998888776642
Q ss_pred cccceEEeecccCC-----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 QEITNLFWVPLQVQ-----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~~~~~v~~~a~~~~-----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
..+|++||+++... .++...+++|+.++..+++++...+.....-.+++++||.
T Consensus 78 g~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~g~~iv~isS~ 142 (520)
T PRK06484 78 GRIDVLVNNAGVTDPTMTATLDTTLEEFARLQAINLTGAYLVAREALRLMIEQGHGAAIVNVASG 142 (520)
T ss_pred CCCCEEEECCCcCCCCCcccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCCeEEEECCc
Confidence 13899999987521 1355678999999888888776542101111367777764
No 257
>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.31 E-value=7.2e-11 Score=96.44 Aligned_cols=120 Identities=9% Similarity=-0.074 Sum_probs=81.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C-C--CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G-W--FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~-~--~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+++|+++|||| ++.||++++++|+ ++|++|++..|+... . . ....... .+.+|++|++++.+.++.
T Consensus 4 ~~~k~~lITGa~~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~v~~~~~~ 77 (261)
T PRK08690 4 LQGKKILITGMISERSIAYGIAKACR-----EQGAELAFTYVVDKLEERVRKMAAELDSEL-VFRCDVASDDEINQVFAD 77 (261)
T ss_pred cCCcEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCcHHHHHHHHHHHhccCCce-EEECCCCCHHHHHHHHHH
Confidence 45689999997 6799999999999 799999987664211 0 0 0113456 789999999988887765
Q ss_pred ccc---ccceEEeecccCCc--------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQE--------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~--------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+.... .+...+++|+.++..+.+++...+... -.+++++||.
T Consensus 78 ~~~~~g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~l~~~~~p~m~~~--~g~Iv~iss~ 148 (261)
T PRK08690 78 LGKHWDGLDGLVHSIGFAPKEALSGDFLDSISREAFNTAHEISAYSLPALAKAARPMMRGR--NSAIVALSYL 148 (261)
T ss_pred HHHHhCCCcEEEECCccCCccccccchhhhcCHHHHHHHHHhchHHHHHHHHHHHHHhhhc--CcEEEEEccc
Confidence 421 38999999976421 123345788888777777665432111 1467777664
No 258
>PRK08303 short chain dehydrogenase; Provisional
Probab=99.30 E-value=8.4e-11 Score=98.38 Aligned_cols=121 Identities=16% Similarity=0.002 Sum_probs=83.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--------C-------C--CCCCceeEEEeeCCCH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--------W-------F--PTALVDRYITFDALDP 69 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--------~-------~--~~~~~~~~i~~Dl~d~ 69 (211)
+.+|+++||||+++||++++++|+ +.|++|++++|+.... . . ....+. ++.+|++|+
T Consensus 6 l~~k~~lITGgs~GIG~aia~~la-----~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~Dv~~~ 79 (305)
T PRK08303 6 LRGKVALVAGATRGAGRGIAVELG-----AAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGI-AVQVDHLVP 79 (305)
T ss_pred CCCCEEEEeCCCchHHHHHHHHHH-----HCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceE-EEEcCCCCH
Confidence 346899999999999999999999 6899999999974210 0 0 012466 789999999
Q ss_pred HHHHHHHHhccc---ccceEEeec-ccC------C-------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 70 TDTALKLSLISQ---EITNLFWVP-LQV------Q-------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 70 ~~~~~~~~~~~~---~~~~v~~~a-~~~------~-------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
+++.++++.+.. .+|++||++ +.. . ..+.+.+++|+.+...+++++...+... +-.+|+.+|
T Consensus 80 ~~v~~~~~~~~~~~g~iDilVnnA~g~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~lp~m~~~-~~g~IV~is 158 (305)
T PRK08303 80 EQVRALVERIDREQGRLDILVNDIWGGEKLFEWGKPVWEHSLDKGLRMLRLAIDTHLITSHFALPLLIRR-PGGLVVEIT 158 (305)
T ss_pred HHHHHHHHHHHHHcCCccEEEECCcccccccccCCchhhcCHHHHHHHHHHhhHHHHHHHHHHHHHhhhC-CCcEEEEEC
Confidence 988877765421 389999998 521 1 1234556888888777777666543111 124677776
Q ss_pred cC
Q 028258 133 GT 134 (211)
Q Consensus 133 ~~ 134 (211)
|.
T Consensus 159 S~ 160 (305)
T PRK08303 159 DG 160 (305)
T ss_pred Cc
Confidence 63
No 259
>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional
Probab=99.29 E-value=5.2e-11 Score=104.57 Aligned_cols=121 Identities=12% Similarity=0.026 Sum_probs=87.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
.++++|||||+|+||++++++|. ++|++|++++|+..... ...-+.+ ++.+|++|++++.+.++.+..
T Consensus 209 ~g~~vlItGasggIG~~la~~l~-----~~Ga~vi~~~~~~~~~~l~~~~~~~~~~-~~~~Dv~~~~~~~~~~~~~~~~~ 282 (450)
T PRK08261 209 AGKVALVTGAARGIGAAIAEVLA-----RDGAHVVCLDVPAAGEALAAVANRVGGT-ALALDITAPDAPARIAEHLAERH 282 (450)
T ss_pred CCCEEEEecCCCHHHHHHHHHHH-----HCCCEEEEEeCCccHHHHHHHHHHcCCe-EEEEeCCCHHHHHHHHHHHHHhC
Confidence 46899999999999999999999 68999999988543210 0112356 889999999988777765421
Q ss_pred -ccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 82 -EITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 82 -~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+|.|||+++... ..+...+++|+.++.++.+++..... ...-.+|+++||..
T Consensus 283 g~id~vi~~AG~~~~~~~~~~~~~~~~~~~~~n~~g~~~l~~~~~~~~~-~~~~g~iv~~SS~~ 345 (450)
T PRK08261 283 GGLDIVVHNAGITRDKTLANMDEARWDSVLAVNLLAPLRITEALLAAGA-LGDGGRIVGVSSIS 345 (450)
T ss_pred CCCCEEEECCCcCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhh-hcCCCEEEEECChh
Confidence 3899999998642 13456678999999999998876310 01125778777643
No 260
>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.28 E-value=1.1e-10 Score=96.03 Aligned_cols=117 Identities=9% Similarity=-0.051 Sum_probs=84.7
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C---CCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G---WFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.+|++|||||+ +.||.+++++|+ ++|++|+++.|+... . ........ .+.+|++|++++.+.++.+
T Consensus 9 ~~k~~lItGas~~~GIG~aia~~la-----~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~~~~~ 82 (272)
T PRK08159 9 AGKRGLILGVANNRSIAWGIAKACR-----AAGAELAFTYQGDALKKRVEPLAAELGAFV-AGHCDVTDEASIDAVFETL 82 (272)
T ss_pred cCCEEEEECCCCCCcHHHHHHHHHH-----HCCCEEEEEcCchHHHHHHHHHHHhcCCce-EEecCCCCHHHHHHHHHHH
Confidence 46899999997 899999999999 799999888775311 0 00113356 7899999999888877654
Q ss_pred cc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 SQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.. .+|++||+|+... ..+...+++|+.++..+++++...+. +-.+++++||
T Consensus 83 ~~~~g~iD~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~---~~g~Iv~iss 149 (272)
T PRK08159 83 EKKWGKLDFVVHAIGFSDKDELTGRYVDTSRDNFTMTMDISVYSFTAVAQRAEKLMT---DGGSILTLTY 149 (272)
T ss_pred HHhcCCCcEEEECCcccCccccccCcccCCHHHHHHHHhHHHHHHHHHHHHHHHhcC---CCceEEEEec
Confidence 31 3899999997532 13456779999999888888776532 1146666665
No 261
>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.28 E-value=1.5e-10 Score=94.36 Aligned_cols=107 Identities=9% Similarity=-0.012 Sum_probs=78.9
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CC-C----CCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PG-W----FPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~-~----~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|+++|||| ++.||.+++++|+ ++|++|++++|+.. .. . .....+. ++.+|++|++++.+.++.
T Consensus 5 ~~~k~~lItGa~~s~GIG~a~a~~la-----~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~i~~~~~~ 78 (256)
T PRK07889 5 LEGKRILVTGVITDSSIAFHVARVAQ-----EQGAEVVLTGFGRALRLTERIAKRLPEPAP-VLELDVTNEEHLASLADR 78 (256)
T ss_pred ccCCEEEEeCCCCcchHHHHHHHHHH-----HCCCEEEEecCccchhHHHHHHHhcCCCCc-EEeCCCCCHHHHHHHHHH
Confidence 34689999999 8999999999999 69999999887542 11 0 0123577 899999999988777665
Q ss_pred cc---cccceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 79 IS---QEITNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
+. ..+|++||+|+.... .+...+++|+.++..+.+.+...+
T Consensus 79 ~~~~~g~iD~li~nAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~m 135 (256)
T PRK07889 79 VREHVDGLDGVVHSIGFAPQSALGGNFLDAPWEDVATALHVSAYSLKSLAKALLPLM 135 (256)
T ss_pred HHHHcCCCcEEEEccccccccccCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhc
Confidence 42 138999999976310 233457899998888888776553
No 262
>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases. As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....
Probab=99.28 E-value=1.6e-11 Score=93.06 Aligned_cols=116 Identities=17% Similarity=0.094 Sum_probs=87.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC--CCCC-------CCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR--PPPG-------WFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~--~~~~-------~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+++||||+|.||++++++|++ +.++.|+++.|+ .+.. .....++. ++.+|+++++++.+.++.+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~----~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 75 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALAR----RGARVVILTSRSEDSEGAQELIQELKAPGAKIT-FIECDLSDPESIRALIEEVI 75 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHH----TTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEE-EEESETTSHHHHHHHHHHHH
T ss_pred CEEEEECCCCHHHHHHHHHHHh----cCceEEEEeeecccccccccccccccccccccc-cccccccccccccccccccc
Confidence 6899999999999999999994 336678888888 1110 01236778 89999999998888877665
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++.... .+...+++|+.+...+.+++... .-.+++++||..
T Consensus 76 ~~~~~ld~li~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~-----~~g~iv~~sS~~ 137 (167)
T PF00106_consen 76 KRFGPLDILINNAGIFSDGSLDDLSEEELERVFRVNLFGPFLLAKALLPQ-----GGGKIVNISSIA 137 (167)
T ss_dssp HHHSSESEEEEECSCTTSBSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHH-----TTEEEEEEEEGG
T ss_pred cccccccccccccccccccccccccchhhhhccccccceeeeeeehheec-----cccceEEecchh
Confidence 138999999987442 34457789999888888888774 346778887743
No 263
>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.28 E-value=1.4e-10 Score=94.74 Aligned_cols=120 Identities=10% Similarity=-0.094 Sum_probs=84.3
Q ss_pred CCCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---CCCC---CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 6 QNPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRP---PPGW---FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 6 ~~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+++|+++|||| ++.||++++++|+ ++|++|+++.|.. +... ...+... .+.+|++|++++.++++
T Consensus 3 ~l~~k~vlItGas~~~GIG~a~a~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~d~~~v~~~~~ 76 (260)
T PRK06997 3 FLAGKRILITGLLSNRSIAYGIAKACK-----REGAELAFTYVGDRFKDRITEFAAEFGSDL-VFPCDVASDEQIDALFA 76 (260)
T ss_pred ccCCcEEEEeCCCCCCcHHHHHHHHHH-----HCCCeEEEEccchHHHHHHHHHHHhcCCcc-eeeccCCCHHHHHHHHH
Confidence 345689999996 6899999999999 6999998876531 1110 0112345 78899999999888876
Q ss_pred hccc---ccceEEeecccCC--------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 78 LISQ---EITNLFWVPLQVQ--------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 78 ~~~~---~~~~v~~~a~~~~--------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
.+.. .+|++||+|+... .++...+++|+.++..+.+++...+. +-.+++++||.
T Consensus 77 ~~~~~~g~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~lp~m~---~~g~Ii~iss~ 147 (260)
T PRK06997 77 SLGQHWDGLDGLVHSIGFAPREAIAGDFLDGLSRENFRIAHDISAYSFPALAKAALPMLS---DDASLLTLSYL 147 (260)
T ss_pred HHHHHhCCCcEEEEccccCCccccccccchhcCHHHHHHHHHhhhHHHHHHHHHHHHhcC---CCceEEEEecc
Confidence 5531 3899999997531 12344678999998888888776642 12467777663
No 264
>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.28 E-value=9.6e-11 Score=96.54 Aligned_cols=117 Identities=12% Similarity=-0.025 Sum_probs=85.2
Q ss_pred CCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC---CCC---C-CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPP---PGW---F-PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~---~~~---~-~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.+|+++||||+ +.||++++++|+ ++|++|+++.|+.. ... . .... . .+.+|++|.+++.+.++.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la-----~~G~~Vil~~r~~~~~~~~~~~~~~~~~~-~-~~~~Dv~d~~~v~~~~~~ 76 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACF-----EQGAELAFTYLNEALKKRVEPIAQELGSD-Y-VYELDVSKPEHFKSLAES 76 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHH-----HCCCEEEEEecCHHHHHHHHHHHHhcCCc-e-EEEecCCCHHHHHHHHHH
Confidence 36899999997 799999999999 68999999888742 100 0 1122 6 789999999988877765
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+|+... .++...+++|+.++..+.+++...+... .+|+++||.
T Consensus 77 i~~~~g~iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~---g~Iv~isS~ 145 (274)
T PRK08415 77 LKKDLGKIDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDG---ASVLTLSYL 145 (274)
T ss_pred HHHHcCCCCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccC---CcEEEEecC
Confidence 521 3899999998531 1345678999999888888777654211 467777763
No 265
>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated
Probab=99.25 E-value=7.5e-11 Score=102.00 Aligned_cols=101 Identities=12% Similarity=0.014 Sum_probs=79.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
++|+++||||||+||++++++|. ++|++|++++|++++.. .....++ .+.+|++|++++.+.+.+ +
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La-----~~G~~Vi~l~r~~~~l~~~~~~~~~~v~-~v~~Dvsd~~~v~~~l~~----I 246 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELH-----QQGAKVVALTSNSDKITLEINGEDLPVK-TLHWQVGQEAALAELLEK----V 246 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHhhcCCCeE-EEEeeCCCHHHHHHHhCC----C
Confidence 46899999999999999999999 68999999998765321 0123467 889999999988877754 7
Q ss_pred ceEEeecccCCc------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQE------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~~------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|.+||+|+.... ++.+.+++|+.++.++++++...
T Consensus 247 DiLInnAGi~~~~~~s~e~~~~~~~vNv~g~i~Li~a~lp~ 287 (406)
T PRK07424 247 DILIINHGINVHGERTPEAINKSYEVNTFSAWRLMELFFTT 287 (406)
T ss_pred CEEEECCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 899999876321 34567899999999999887654
No 266
>PRK08862 short chain dehydrogenase; Provisional
Probab=99.24 E-value=2.2e-10 Score=91.89 Aligned_cols=120 Identities=10% Similarity=-0.050 Sum_probs=79.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLI- 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~- 79 (211)
.+|+++||||++.||++++++|+ ++|++|++++|++.+.. .....+. .+.+|++|++++.+.++.+
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la-----~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~-~~~~D~~~~~~~~~~~~~~~ 77 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFA-----RLGATLILCDQDQSALKDTYEQCSALTDNVY-SFQLKDFSQESIRHLFDAIE 77 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhcCCCeE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 69999999999765321 0123466 7889999999887766543
Q ss_pred ---ccccceEEeecccCC---c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 80 ---SQEITNLFWVPLQVQ---E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 80 ---~~~~~~v~~~a~~~~---~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
...+|++||+++... . .+.+.+.+|..++..+++.+...+....+-..++++||
T Consensus 78 ~~~g~~iD~li~nag~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~m~~~~~~g~Iv~isS 144 (227)
T PRK08862 78 QQFNRAPDVLVNNWTSSPLPSLFDEQPSESFIQQLSSLASTLFTYGQVAAERMRKRNKKGVIVNVIS 144 (227)
T ss_pred HHhCCCCCEEEECCccCCCCCccccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHhcCCCceEEEEec
Confidence 203899999996321 1 22334566766655555444332100111246777766
No 267
>PRK05599 hypothetical protein; Provisional
Probab=99.23 E-value=4.4e-10 Score=91.01 Aligned_cols=119 Identities=19% Similarity=0.102 Sum_probs=77.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C--C-CCCceeEEEeeCCCHHHHHHHHHhcc-
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F--P-TALVDRYITFDALDPTDTALKLSLIS- 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~--~-~~~~~~~i~~Dl~d~~~~~~~~~~~~- 80 (211)
|+++||||++.||.+++++|. + |++|++++|++++.. . . ...+. ++.+|++|++++.+.++.+.
T Consensus 1 ~~vlItGas~GIG~aia~~l~-----~-g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~-~~~~Dv~d~~~v~~~~~~~~~ 73 (246)
T PRK05599 1 MSILILGGTSDIAGEIATLLC-----H-GEDVVLAARRPEAAQGLASDLRQRGATSVH-VLSFDAQDLDTHRELVKQTQE 73 (246)
T ss_pred CeEEEEeCccHHHHHHHHHHh-----C-CCEEEEEeCCHHHHHHHHHHHHhccCCceE-EEEcccCCHHHHHHHHHHHHH
Confidence 469999999999999999998 4 899999999765321 0 1 12477 89999999998877765542
Q ss_pred --cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 --QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 --~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
..+|++||+++.... .+.+...+|..+...++.++...+.....-.+++++||..
T Consensus 74 ~~g~id~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~g~Iv~isS~~ 139 (246)
T PRK05599 74 LAGEISLAVVAFGILGDQERAETDEAHAVEIATVDYTAQVSMLTVLADELRAQTAPAAIVAFSSIA 139 (246)
T ss_pred hcCCCCEEEEecCcCCCchhhhcCcHHHHHHHHHHHHhHHHHHHHHHHHHHhcCCCCEEEEEeccc
Confidence 138999999886421 1123345676665554444322210011124778877743
No 268
>KOG1203 consensus Predicted dehydrogenase [Carbohydrate transport and metabolism]
Probab=99.23 E-value=1.3e-10 Score=99.33 Aligned_cols=164 Identities=12% Similarity=0.070 Sum_probs=100.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHH-HHHHHHHhccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPT-DTALKLSLISQ 81 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~~ 81 (211)
..+|||+||||.+|+-+++.|+ +.|+.|+++.|+.++.. ..+...+ .+..|..... ......+.+..
T Consensus 79 ~~~VlVvGatG~vG~~iv~~ll-----krgf~vra~VRd~~~a~~~~~~~~~d~~~~-~v~~~~~~~~d~~~~~~~~~~~ 152 (411)
T KOG1203|consen 79 PTTVLVVGATGKVGRRIVKILL-----KRGFSVRALVRDEQKAEDLLGVFFVDLGLQ-NVEADVVTAIDILKKLVEAVPK 152 (411)
T ss_pred CCeEEEecCCCchhHHHHHHHH-----HCCCeeeeeccChhhhhhhhcccccccccc-eeeeccccccchhhhhhhhccc
Confidence 4689999999999999999999 69999999999876421 1245566 6666666553 34444444321
Q ss_pred ccceEEeecccCCchh--HHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcC
Q 028258 82 EITNLFWVPLQVQESE--EVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKE 159 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~--~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e 159 (211)
....++-|++.....+ ...+.+...++.|+++||+.+ +++||+++++. ++. ++ . ...+...
T Consensus 153 ~~~~v~~~~ggrp~~ed~~~p~~VD~~g~knlvdA~~~a-----Gvk~~vlv~si---~~~--~~---~----~~~~~~~ 215 (411)
T KOG1203|consen 153 GVVIVIKGAGGRPEEEDIVTPEKVDYEGTKNLVDACKKA-----GVKRVVLVGSI---GGT--KF---N----QPPNILL 215 (411)
T ss_pred cceeEEecccCCCCcccCCCcceecHHHHHHHHHHHHHh-----CCceEEEEEee---cCc--cc---C----CCchhhh
Confidence 1223444444433221 345678899999999999887 89999999652 210 00 0 0000000
Q ss_pred CCCCCCCCCcchhHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 160 DSSRLPFPNFYYELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 160 ~~~~~~~~~~~~~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.. ...-.+.+..++.+. +.|++++||||+...-...
T Consensus 216 ~~--~~~~~~k~~~e~~~~--~Sgl~ytiIR~g~~~~~~~ 251 (411)
T KOG1203|consen 216 LN--GLVLKAKLKAEKFLQ--DSGLPYTIIRPGGLEQDTG 251 (411)
T ss_pred hh--hhhhHHHHhHHHHHH--hcCCCcEEEeccccccCCC
Confidence 00 000011123344444 5899999999998776544
No 269
>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional
Probab=99.23 E-value=2.1e-10 Score=93.69 Aligned_cols=119 Identities=11% Similarity=-0.018 Sum_probs=83.5
Q ss_pred CCCCeEEEEcCCC--hHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CC-CC-CCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIGVTG--ISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WF-PT-ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtGatG--~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~-~~-~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|+++||||++ .||++++++|+ ++|++|++..|+.... .. .. .... ++.+|++|++++.+.++.
T Consensus 6 ~~~k~~lITGas~~~GIG~a~a~~la-----~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~-~~~~Dv~~~~~v~~~~~~ 79 (260)
T PRK06603 6 LQGKKGLITGIANNMSISWAIAQLAK-----KHGAELWFTYQSEVLEKRVKPLAEEIGCNF-VSELDVTNPKSISNLFDD 79 (260)
T ss_pred cCCcEEEEECCCCCcchHHHHHHHHH-----HcCCEEEEEeCchHHHHHHHHHHHhcCCce-EEEccCCCHHHHHHHHHH
Confidence 3468999999997 89999999999 6899999888763210 00 11 2234 678999999988877765
Q ss_pred ccc---ccceEEeecccCC-------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 79 ISQ---EITNLFWVPLQVQ-------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~-------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.. .+|++||+++... ..+...+++|+.++..+++.+...+. .-.+++++||.
T Consensus 80 ~~~~~g~iDilVnnag~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~m~---~~G~Iv~isS~ 148 (260)
T PRK06603 80 IKEKWGSFDFLLHGMAFADKNELKGRYVDTSLENFHNSLHISCYSLLELSRSAEALMH---DGGSIVTLTYY 148 (260)
T ss_pred HHHHcCCccEEEEccccCCcccccCccccCCHHHHHHHHHHHHHHHHHHHHHHHhhhc---cCceEEEEecC
Confidence 421 3899999987521 13455778999988888887665431 11467777663
No 270
>TIGR01500 sepiapter_red sepiapterin reductase. This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs.
Probab=99.23 E-value=2.6e-10 Score=92.75 Aligned_cols=122 Identities=14% Similarity=0.011 Sum_probs=81.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C----CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F----PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~----~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.++||||+++||.+++++|++.. .+.|++|+++.|+..... . ....+. ++.+|++|++++.+.++.+..
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~-~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~v~-~~~~Dl~~~~~v~~~~~~~~~ 79 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCL-KSPGSVLVLSARNDEALRQLKAEIGAERSGLRVV-RVSLDLGAEAGLEQLLKALRE 79 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhh-ccCCcEEEEEEcCHHHHHHHHHHHHhcCCCceEE-EEEeccCCHHHHHHHHHHHHh
Confidence 58999999999999999998200 017999999999765311 0 123577 899999999988877765432
Q ss_pred c-------cceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCC-CCceEEEEeecC
Q 028258 82 E-------ITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGR-SRLRHVALLTGT 134 (211)
Q Consensus 82 ~-------~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~-~~~~~~~~~s~~ 134 (211)
. .+++||+|+... ..+...+++|+.++..+.+.+...+... ..-.+++++||.
T Consensus 80 ~~g~~~~~~~~lv~nAG~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~~~l~~~~~~~~~iv~isS~ 152 (256)
T TIGR01500 80 LPRPKGLQRLLLINNAGTLGDVSKGFVDLSDSTQVQNYWALNLTSMLCLTSSVLKAFKDSPGLNRTVVNISSL 152 (256)
T ss_pred ccccCCCceEEEEeCCcccCccccccccCCCHHHHHHHHHhhhHHHHHHHHHHHHHHhhcCCCCCEEEEECCH
Confidence 1 257899987521 1233567899998877777665442111 112467777774
No 271
>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.19 E-value=6.3e-10 Score=93.18 Aligned_cols=122 Identities=15% Similarity=0.025 Sum_probs=87.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
..++++|||||++||.+++++|+ .+|.+|+...|+.... ......+. ++.+|+++.+++.+..+.
T Consensus 34 ~~~~~vVTGansGIG~eta~~La-----~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~-~~~lDLssl~SV~~fa~~ 107 (314)
T KOG1208|consen 34 SGKVALVTGATSGIGFETARELA-----LRGAHVVLACRNEERGEEAKEQIQKGKANQKIR-VIQLDLSSLKSVRKFAEE 107 (314)
T ss_pred CCcEEEEECCCCchHHHHHHHHH-----hCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceE-EEECCCCCHHHHHHHHHH
Confidence 46899999999999999999999 6899999999987431 11245667 899999999988776654
Q ss_pred cc---cccceEEeecccCCc-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCee
Q 028258 79 IS---QEITNLFWVPLQVQE-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKH 136 (211)
Q Consensus 79 ~~---~~~~~v~~~a~~~~~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~ 136 (211)
.. ...|++|+.||.... ..+..+.+|..|...|.+.+...++.+.. .|||.+||...
T Consensus 108 ~~~~~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~-~RIV~vsS~~~ 174 (314)
T KOG1208|consen 108 FKKKEGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAP-SRIVNVSSILG 174 (314)
T ss_pred HHhcCCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCC-CCEEEEcCccc
Confidence 42 248889998887432 23446788988766655555433211222 78888888654
No 272
>PLN00015 protochlorophyllide reductase
Probab=99.13 E-value=5.1e-10 Score=93.64 Aligned_cols=119 Identities=14% Similarity=0.112 Sum_probs=84.2
Q ss_pred EEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc---c
Q 028258 13 LIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS---Q 81 (211)
Q Consensus 13 lVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~ 81 (211)
+|||||++||.+++++|+ ++| ++|+++.|+..... .....+. ++.+|++|.+++.++++.+. .
T Consensus 1 lITGas~GIG~aia~~l~-----~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~d~~~v~~~~~~~~~~~~ 74 (308)
T PLN00015 1 IITGASSGLGLATAKALA-----ETGKWHVVMACRDFLKAERAAKSAGMPKDSYT-VMHLDLASLDSVRQFVDNFRRSGR 74 (308)
T ss_pred CEeCCCChHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEE-EEEecCCCHHHHHHHHHHHHhcCC
Confidence 699999999999999999 688 99999998754311 0123577 88999999998877776542 1
Q ss_pred ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCC-ceEEEEeecCeee
Q 028258 82 EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSR-LRHVALLTGTKHY 137 (211)
Q Consensus 82 ~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~-~~~~~~~s~~~~y 137 (211)
.+|++||+|+... ..+...+++|+.++..+++.+...+..... -.+|+++||...+
T Consensus 75 ~iD~lInnAG~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~l~~~~~~~g~IV~vsS~~~~ 141 (308)
T PLN00015 75 PLDVLVCNAAVYLPTAKEPTFTADGFELSVGTNHLGHFLLSRLLLDDLKKSDYPSKRLIIVGSITGN 141 (308)
T ss_pred CCCEEEECCCcCCCCCCcCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCCCEEEEEeccccc
Confidence 3899999997631 133457799999877776665543211110 3578888886543
No 273
>PF08659 KR: KR domain; InterPro: IPR013968 This domain is found in bacterial polyketide synthases that catalyse the first step in the reductive modification of the beta-carbonyl centres in the growing polyketide chain. It uses NADPH to reduce the keto group to a hydroxy group. ; PDB: 3QP9_D 2FR0_A 2FR1_A 2Z5L_A 3SLK_B 3MJE_B 3MJC_A 3MJT_B 3MJV_A 3MJS_B ....
Probab=99.12 E-value=7.9e-10 Score=85.66 Aligned_cols=115 Identities=22% Similarity=0.211 Sum_probs=78.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC-CCC---------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP-PGW---------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~-~~~---------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++||||++|.+|..+++.|++ ...-+|+.+.|+.. ... .....++ ++.+|++|++++.++++.+.
T Consensus 2 tylitGG~gglg~~la~~La~----~~~~~~il~~r~~~~~~~~~~~i~~l~~~g~~v~-~~~~Dv~d~~~v~~~~~~~~ 76 (181)
T PF08659_consen 2 TYLITGGLGGLGQSLARWLAE----RGARRLILLGRSGAPSAEAEAAIRELESAGARVE-YVQCDVTDPEAVAAALAQLR 76 (181)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----TT-SEEEEEESSGGGSTTHHHHHHHHHHTT-EEE-EEE--TTSHHHHHHHHHTSH
T ss_pred EEEEECCccHHHHHHHHHHHH----cCCCEEEEeccCCCccHHHHHHHHHHHhCCCcee-eeccCccCHHHHHHHHHHHH
Confidence 689999999999999999994 33456999999832 211 1235678 89999999999999998774
Q ss_pred c---ccceEEeecccCCc------h---hHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 81 Q---EITNLFWVPLQVQE------S---EEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~~------~---~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
. +++.|||+++.... + ....+..-+.++.+|.+++... .+.+|++.||..
T Consensus 77 ~~~~~i~gVih~ag~~~~~~~~~~t~~~~~~~~~~Kv~g~~~L~~~~~~~-----~l~~~i~~SSis 138 (181)
T PF08659_consen 77 QRFGPIDGVIHAAGVLADAPIQDQTPDEFDAVLAPKVRGLWNLHEALENR-----PLDFFILFSSIS 138 (181)
T ss_dssp TTSS-EEEEEE-------B-GCC--HHHHHHHHHHHHHHHHHHHHHHTTT-----TTSEEEEEEEHH
T ss_pred hccCCcceeeeeeeeecccccccCCHHHHHHHHhhhhhHHHHHHHHhhcC-----CCCeEEEECChh
Confidence 2 37889999987432 2 2234566678889998888765 678888888754
No 274
>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]
Probab=99.12 E-value=1.1e-09 Score=84.93 Aligned_cols=164 Identities=10% Similarity=-0.034 Sum_probs=106.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHHHHHHH----hcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTALVDRYITFDALDPTDTALKLS----LIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~~~~~~----~~~ 80 (211)
.+-+||||||+.+||.+++++|. +.|-+|+++.|+..... ...+.+. ...||+.|.++..+.++ ..+
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~-----elgN~VIi~gR~e~~L~e~~~~~p~~~-t~v~Dv~d~~~~~~lvewLkk~~P 77 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFL-----ELGNTVIICGRNEERLAEAKAENPEIH-TEVCDVADRDSRRELVEWLKKEYP 77 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHH-----HhCCEEEEecCcHHHHHHHHhcCcchh-eeeecccchhhHHHHHHHHHhhCC
Confidence 35689999999999999999999 68999999999876421 2357888 89999999986554443 333
Q ss_pred cccceEEeecccCCc-----------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCC
Q 028258 81 QEITNLFWVPLQVQE-----------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQ 149 (211)
Q Consensus 81 ~~~~~v~~~a~~~~~-----------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~ 149 (211)
. +++++++||.... +..+..++|..++.+|...+..+.-..+ -..++-+||+-.+.
T Consensus 78 ~-lNvliNNAGIqr~~dlt~~e~~~~~~~~eI~~Nl~API~Lt~~~lphl~~q~-~a~IInVSSGLafv----------- 144 (245)
T COG3967 78 N-LNVLINNAGIQRNEDLTGAEDLLDDAEQEIATNLLAPIRLTALLLPHLLRQP-EATIINVSSGLAFV----------- 144 (245)
T ss_pred c-hheeeecccccchhhccCCcchhhHHHHHHHHhhhhHHHHHHHHHHHHHhCC-CceEEEeccccccC-----------
Confidence 3 8889999987432 1234568898877777666654421122 34567777654332
Q ss_pred CCCCCCCCcCCCCCCCCCCcc-hhHHHHHhh--cCCCceEEEecCCceEec
Q 028258 150 LMPYEVPFKEDSSRLPFPNFY-YELEDVSAS--YSPAITYSVHRSSVIIGA 197 (211)
Q Consensus 150 ~~~~~~~~~e~~~~~~~~~~~-~~~e~~l~~--~~~~~~~~i~Rp~~i~G~ 197 (211)
..+..|.+...+.. ......|++ +..++.++-+-|..|--.
T Consensus 145 -------Pm~~~PvYcaTKAaiHsyt~aLR~Qlk~t~veVIE~~PP~V~t~ 188 (245)
T COG3967 145 -------PMASTPVYCATKAAIHSYTLALREQLKDTSVEVIELAPPLVDTT 188 (245)
T ss_pred -------cccccccchhhHHHHHHHHHHHHHHhhhcceEEEEecCCceecC
Confidence 12233322211100 112233443 457899999999888764
No 275
>KOG1611 consensus Predicted short chain-type dehydrogenase [General function prediction only]
Probab=99.09 E-value=4.9e-09 Score=82.43 Aligned_cols=104 Identities=14% Similarity=0.033 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC-CCCC------C-CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR-PPPG------W-FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~-~~~~------~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
.++.++||||+.+||-.|+++|++ ..|.++++..|+ +++. + ..+++++ .++.|++..+++.+..+++
T Consensus 2 spksv~ItGaNRGIGlgLVk~llk----~~~i~~iiat~r~~e~a~~~l~~k~~~d~rvH-ii~Ldvt~deS~~~~~~~V 76 (249)
T KOG1611|consen 2 SPKSVFITGANRGIGLGLVKELLK----DKGIEVIIATARDPEKAATELALKSKSDSRVH-IIQLDVTCDESIDNFVQEV 76 (249)
T ss_pred CCccEEEeccCcchhHHHHHHHhc----CCCcEEEEEecCChHHhhHHHHHhhccCCceE-EEEEecccHHHHHHHHHHH
Confidence 347799999999999999999997 678887666655 5441 1 1378999 9999999998888877665
Q ss_pred cc-----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHH
Q 028258 80 SQ-----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLV 116 (211)
Q Consensus 80 ~~-----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~ 116 (211)
.. .++.++++|+... ..+.+.+++|..+...+.+++.
T Consensus 77 ~~iVg~~GlnlLinNaGi~~~y~~~~~~~r~~~~~~~~tN~v~~il~~Q~~l 128 (249)
T KOG1611|consen 77 EKIVGSDGLNLLINNAGIALSYNTVLKPSRAVLLEQYETNAVGPILLTQAFL 128 (249)
T ss_pred HhhcccCCceEEEeccceeeecccccCCcHHHHHHHhhhcchhHHHHHHHHH
Confidence 43 2677888887632 1355678999877655555443
No 276
>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]
Probab=99.01 E-value=1.6e-09 Score=84.47 Aligned_cols=123 Identities=16% Similarity=0.085 Sum_probs=87.1
Q ss_pred CCCCeEEEEc-CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 7 NPKSVALIIG-VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 7 ~~~~~ilVtG-atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
...|+||||| ++|+||.+|+++|. +.||.|++++|+.+... + ...++. ..++|+++++++.+....+..
T Consensus 5 ~~~k~VlItgcs~GGIG~ala~ef~-----~~G~~V~AtaR~~e~M~~L~~~~gl~-~~kLDV~~~~~V~~v~~evr~~~ 78 (289)
T KOG1209|consen 5 SQPKKVLITGCSSGGIGYALAKEFA-----RNGYLVYATARRLEPMAQLAIQFGLK-PYKLDVSKPEEVVTVSGEVRANP 78 (289)
T ss_pred cCCCeEEEeecCCcchhHHHHHHHH-----hCCeEEEEEccccchHhhHHHhhCCe-eEEeccCChHHHHHHHHHHhhCC
Confidence 3468889888 77999999999999 69999999999877532 1 246788 999999999988776554422
Q ss_pred --ccceEEeecccCC--c-------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 --EITNLFWVPLQVQ--E-------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 --~~~~v~~~a~~~~--~-------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
.+|++++.|+..- + .-+..+++|+.|..++.+++.+.+. .....++.+.|...|
T Consensus 79 ~Gkld~L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~li--kaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 79 DGKLDLLYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLI--KAKGTIVNVGSLAGV 143 (289)
T ss_pred CCceEEEEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHH--HccceEEEecceeEE
Confidence 3788999887631 1 2234678898877676666654321 112456666665555
No 277
>KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism]
Probab=98.99 E-value=4e-09 Score=81.22 Aligned_cols=120 Identities=15% Similarity=-0.000 Sum_probs=85.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHH----h
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLS----L 78 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~----~ 78 (211)
|.|.++||||+..||++++..|. ..|++|.+.+++..... +..++-+..+.||+++.++++..++ .
T Consensus 13 ~sk~~~vtGg~sGIGrAia~~la-----~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~ 87 (256)
T KOG1200|consen 13 MSKVAAVTGGSSGIGRAIAQLLA-----KKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKS 87 (256)
T ss_pred hcceeEEecCCchHHHHHHHHHH-----hcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHh
Confidence 57899999999999999999999 79999999888655311 1222233267899999987655444 3
Q ss_pred cccccceEEeecccCC---------chhHHHHhhcHHHHHHHHHHHHhcC--CCCCCceEEEEeecC
Q 028258 79 ISQEITNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSVLVSSN--SGRSRLRHVALLTGT 134 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~~~~~~--~~~~~~~~~~~~s~~ 134 (211)
+. .|+++++||+... .+|++.+.+|+.++....+++.+.+ ..+ +--.++-+||.
T Consensus 88 ~g-~psvlVncAGItrD~~Llrmkq~qwd~vi~vNL~gvfl~tqaa~r~~~~~~~-~~~sIiNvsSI 152 (256)
T KOG1200|consen 88 LG-TPSVLVNCAGITRDGLLLRMKQEQWDSVIAVNLTGVFLVTQAAVRAMVMNQQ-QGLSIINVSSI 152 (256)
T ss_pred cC-CCcEEEEcCccccccceeeccHHHHHHHHHhhchhhHHHHHHHHHHHHHhcC-CCceEEeehhh
Confidence 43 4899999999854 3788889999999877777665542 111 11256666663
No 278
>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]
Probab=98.99 E-value=2.6e-08 Score=81.99 Aligned_cols=124 Identities=15% Similarity=-0.017 Sum_probs=85.7
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----------CCCCCceeEEEeeCCCHHHHHH
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----------FPTALVDRYITFDALDPTDTAL 74 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----------~~~~~~~~~i~~Dl~d~~~~~~ 74 (211)
.....|++|||||+..||+++|++|. +.|.+|++..|+++... .....+. .+.+|+++.+.+.+
T Consensus 4 ~~l~gkvalVTG~s~GIG~aia~~la-----~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dv~~~~~~~~ 77 (270)
T KOG0725|consen 4 GRLAGKVALVTGGSSGIGKAIALLLA-----KAGAKVVITGRSEERLEETAQELGGLGYTGGKVL-AIVCDVSKEVDVEK 77 (270)
T ss_pred ccCCCcEEEEECCCChHHHHHHHHHH-----HCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeE-EEECcCCCHHHHHH
Confidence 34467999999999999999999999 69999999999876411 1134577 88999998876544
Q ss_pred HH----HhcccccceEEeecccCCc----------hhHHHHhhcHHH-HHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 75 KL----SLISQEITNLFWVPLQVQE----------SEEVNIFKNSTM-LKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 75 ~~----~~~~~~~~~v~~~a~~~~~----------~~~~~~~~n~~~-~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.+ +.....+|.+++.|+.... .|+..+++|+.+ +.++..++...+. ..+-..++++|+..
T Consensus 78 l~~~~~~~~~GkidiLvnnag~~~~~~~~~~~s~e~~d~~~~~Nl~G~~~~~~~~a~~~~~-~~~gg~I~~~ss~~ 152 (270)
T KOG0725|consen 78 LVEFAVEKFFGKIDILVNNAGALGLTGSILDLSEEVFDKIMATNLRGSAFCLKQAARPMLK-KSKGGSIVNISSVA 152 (270)
T ss_pred HHHHHHHHhCCCCCEEEEcCCcCCCCCChhhCCHHHHHHHHhhhchhHHHHHHHHHHHHHH-hcCCceEEEEeccc
Confidence 43 3322238999999876431 455677899984 5566665554421 11234566766654
No 279
>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=5.8e-09 Score=85.71 Aligned_cols=118 Identities=22% Similarity=0.123 Sum_probs=89.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC------C---CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG------W---FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~------~---~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++++|||+|..+|..++.++. .+|.+|+++.|+..+. + .....+. +.++|+.|.+++...++++.
T Consensus 34 ~hi~itggS~glgl~la~e~~-----~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~-~~S~d~~~Y~~v~~~~~~l~ 107 (331)
T KOG1210|consen 34 RHILITGGSSGLGLALALECK-----REGADVTITARSGKKLLEAKAELELLTQVEDVS-YKSVDVIDYDSVSKVIEELR 107 (331)
T ss_pred ceEEEecCcchhhHHHHHHHH-----HccCceEEEeccHHHHHHHHhhhhhhhccceee-EeccccccHHHHHHHHhhhh
Confidence 689999999999999999999 6999999999976541 1 1224477 89999999999988888774
Q ss_pred ---cccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 81 ---QEITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 81 ---~~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
..+|++|+||+..-+ .-...+++|..++.|+..++...+....+..+++++||
T Consensus 108 ~~~~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS 172 (331)
T KOG1210|consen 108 DLEGPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSS 172 (331)
T ss_pred hccCCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehh
Confidence 249999999987432 22346799999999998888766421212236776665
No 280
>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.96 E-value=9.2e-09 Score=84.16 Aligned_cols=123 Identities=11% Similarity=-0.054 Sum_probs=86.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
.+++||||||++++|+.++.+|+ +.|..+.+.+.+..... .....++ ...||++|++++.+..+.+..
T Consensus 37 ~g~~vLITGgg~GlGr~ialefa-----~rg~~~vl~Din~~~~~etv~~~~~~g~~~-~y~cdis~~eei~~~a~~Vk~ 110 (300)
T KOG1201|consen 37 SGEIVLITGGGSGLGRLIALEFA-----KRGAKLVLWDINKQGNEETVKEIRKIGEAK-AYTCDISDREEIYRLAKKVKK 110 (300)
T ss_pred cCCEEEEeCCCchHHHHHHHHHH-----HhCCeEEEEeccccchHHHHHHHHhcCcee-EEEecCCCHHHHHHHHHHHHH
Confidence 47899999999999999999999 68888888888776421 0113678 899999999988776655542
Q ss_pred ---ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeee
Q 028258 82 ---EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHY 137 (211)
Q Consensus 82 ---~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y 137 (211)
+|+.+++.|+.... .-+..+++|+.+.....++....|-.. +-.|+|-++|..-+
T Consensus 111 e~G~V~ILVNNAGI~~~~~ll~~~d~ei~k~~~vN~~~~f~t~kaFLP~M~~~-~~GHIV~IaS~aG~ 177 (300)
T KOG1201|consen 111 EVGDVDILVNNAGIVTGKKLLDCSDEEIQKTFDVNTIAHFWTTKAFLPKMLEN-NNGHIVTIASVAGL 177 (300)
T ss_pred hcCCceEEEeccccccCCCccCCCHHHHHHHHHHhhHHHHHHHHHHhHHHHhc-CCceEEEehhhhcc
Confidence 38999999987431 123467899887655555444332000 23688877775443
No 281
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=98.94 E-value=1.3e-08 Score=104.04 Aligned_cols=118 Identities=17% Similarity=0.172 Sum_probs=89.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC----CC-------------------------------
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP----GW------------------------------- 52 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~----~~------------------------------- 52 (211)
.++++|||||+++||.+++++|++ ..|.+|+++.|++.. .|
T Consensus 1996 ~g~vvLVTGGarGIG~aiA~~LA~----~~ga~viL~gRs~~~~~~p~~a~~~~~~~lk~~~~~~l~~~g~~~~P~~i~~ 2071 (2582)
T TIGR02813 1996 SDDVFLVTGGAKGVTFECALELAK----QCQAHFILAGRSSFDDNEPSWAQGKDENELKKAAIQHLQASGEKPTPKKVDA 2071 (2582)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHH----hcCCEEEEEeCCcccccCchhhhccchHHHHHhhhhhhhhcccccccchhhh
Confidence 468999999999999999999994 347899999998210 00
Q ss_pred -------------------CCCCCceeEEEeeCCCHHHHHHHHHhccc--ccceEEeecccCC---------chhHHHHh
Q 028258 53 -------------------FPTALVDRYITFDALDPTDTALKLSLISQ--EITNLFWVPLQVQ---------ESEEVNIF 102 (211)
Q Consensus 53 -------------------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--~~~~v~~~a~~~~---------~~~~~~~~ 102 (211)
.....+. ++.+|++|.+++.++++.+.. .+|.|||+|+... .++...++
T Consensus 2072 ~~~~~~~~~ei~~~la~l~~~G~~v~-y~~~DVtD~~av~~av~~v~~~g~IDgVVhnAGv~~~~~i~~~t~e~f~~v~~ 2150 (2582)
T TIGR02813 2072 LVRPVLSSLEIAQALAAFKAAGASAE-YASADVTNSVSVAATVQPLNKTLQITGIIHGAGVLADKHIQDKTLEEFNAVYG 2150 (2582)
T ss_pred cccccchhHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHHHhCCCcEEEECCccCCCCCcccCCHHHHHHHHH
Confidence 0023467 889999999988888766531 3899999998632 14566789
Q ss_pred hcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 103 KNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 103 ~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+|+.|+.++++++... ..++|+++||..
T Consensus 2151 ~nv~G~~~Ll~al~~~-----~~~~IV~~SSva 2178 (2582)
T TIGR02813 2151 TKVDGLLSLLAALNAE-----NIKLLALFSSAA 2178 (2582)
T ss_pred HHHHHHHHHHHHHHHh-----CCCeEEEEechh
Confidence 9999999999998765 356788888754
No 282
>COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only]
Probab=98.93 E-value=9.1e-09 Score=83.06 Aligned_cols=119 Identities=17% Similarity=0.036 Sum_probs=84.9
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--C----CCC----CCceeEEEeeCCC-HHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--W----FPT----ALVDRYITFDALD-PTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~----~~~----~~~~~~i~~Dl~d-~~~~~~~ 75 (211)
+++|++|||||++.||.++++.|+ ++|++|+++.|+.... . ... ..+. ...+|+++ .+++...
T Consensus 3 ~~~~~ilITGas~GiG~aia~~l~-----~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~Dvs~~~~~v~~~ 76 (251)
T COG1028 3 LSGKVALVTGASSGIGRAIARALA-----REGARVVVAARRSEEEAAEALAAAIKEAGGGRAA-AVAADVSDDEESVEAL 76 (251)
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHH-----HCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEE-EEEecCCCCHHHHHHH
Confidence 456899999999999999999999 6999988888775431 0 011 2456 77899998 8877766
Q ss_pred HHhccc---ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 76 LSLISQ---EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
++.+.. .+|.++++|+... ..+...+.+|+.+...+.+++...+. -++++.+||..
T Consensus 77 ~~~~~~~~g~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~~n~~g~~~~~~~~~~~~~----~~~Iv~isS~~ 145 (251)
T COG1028 77 VAAAEEEFGRIDILVNNAGIAGPDAPLEELTEEDWDRVIDVNLLGAFLLTRAALPLMK----KQRIVNISSVA 145 (251)
T ss_pred HHHHHHHcCCCCEEEECCCCCCCCCChhhCCHHHHHHHHHHhHHHHHHHHHHHHHhhh----hCeEEEECCch
Confidence 655433 2788999988632 13456789999988888875555421 11778777753
No 283
>PLN02730 enoyl-[acyl-carrier-protein] reductase
Probab=98.92 E-value=5.8e-08 Score=81.22 Aligned_cols=118 Identities=17% Similarity=0.082 Sum_probs=78.8
Q ss_pred CCCCeEEEEcC--CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----------C------CCCC----CceeEEEe
Q 028258 7 NPKSVALIIGV--TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----------W------FPTA----LVDRYITF 64 (211)
Q Consensus 7 ~~~~~ilVtGa--tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----------~------~~~~----~~~~~i~~ 64 (211)
.++|++||||| |..||.+++++|. +.|.+|++ .|+.... . .... ... .+.+
T Consensus 7 l~gk~alITGa~~s~GIG~a~A~~la-----~~Ga~Vv~-~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~ 79 (303)
T PLN02730 7 LRGKRAFIAGVADDNGYGWAIAKALA-----AAGAEILV-GTWVPALNIFETSLRRGKFDESRKLPDGSLMEITK-VYPL 79 (303)
T ss_pred CCCCEEEEeCCCCCCcHHHHHHHHHH-----HCCCEEEE-EeCcchhhHHHHhhhccccchhhhcccccccCcCe-eeec
Confidence 56899999999 8999999999999 79999887 4432210 0 0001 135 6788
Q ss_pred eC--CCHH------------------HHHHHHHhccc---ccceEEeecccC----C-------chhHHHHhhcHHHHHH
Q 028258 65 DA--LDPT------------------DTALKLSLISQ---EITNLFWVPLQV----Q-------ESEEVNIFKNSTMLKN 110 (211)
Q Consensus 65 Dl--~d~~------------------~~~~~~~~~~~---~~~~v~~~a~~~----~-------~~~~~~~~~n~~~~~~ 110 (211)
|+ ++++ ++...++.+.. .+|.+||+|+.. . .++...+++|+.++..
T Consensus 80 D~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~i~~~~G~iDiLVnNAG~~~~~~~~~~~~~~e~~~~~~~vN~~~~~~ 159 (303)
T PLN02730 80 DAVFDTPEDVPEDVKTNKRYAGSSNWTVQEVAESVKADFGSIDILVHSLANGPEVTKPLLETSRKGYLAAISASSYSFVS 159 (303)
T ss_pred ceecCccccCchhhhcccccccCCHHHHHHHHHHHHHHcCCCCEEEECCCccccCCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 98 3332 55555554321 389999998531 1 1456678999999888
Q ss_pred HHHHHHhcCCCCCCceEEEEeecC
Q 028258 111 VLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+++++...+... .+++++||.
T Consensus 160 l~~~~~p~m~~~---G~II~isS~ 180 (303)
T PLN02730 160 LLQHFGPIMNPG---GASISLTYI 180 (303)
T ss_pred HHHHHHHHHhcC---CEEEEEech
Confidence 888877654211 467777763
No 284
>PRK12428 3-alpha-hydroxysteroid dehydrogenase; Provisional
Probab=98.88 E-value=1.6e-08 Score=81.60 Aligned_cols=101 Identities=19% Similarity=0.137 Sum_probs=78.1
Q ss_pred HHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeecccCC-chhHHHHhh
Q 028258 25 LAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVPLQVQ-ESEEVNIFK 103 (211)
Q Consensus 25 l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a~~~~-~~~~~~~~~ 103 (211)
++++|+ ++|++|++++|++.+. ...+ ++.+|++|.+++.+.++.+...+|++||+|+... .++...+++
T Consensus 1 ~a~~l~-----~~G~~Vv~~~r~~~~~----~~~~-~~~~Dl~~~~~v~~~~~~~~~~iD~li~nAG~~~~~~~~~~~~v 70 (241)
T PRK12428 1 TARLLR-----FLGARVIGVDRREPGM----TLDG-FIQADLGDPASIDAAVAALPGRIDALFNIAGVPGTAPVELVARV 70 (241)
T ss_pred ChHHHH-----hCCCEEEEEeCCcchh----hhhH-hhcccCCCHHHHHHHHHHhcCCCeEEEECCCCCCCCCHHHhhhh
Confidence 467888 6999999999986642 2346 7899999999999888875333899999998743 356778899
Q ss_pred cHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 104 NSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 104 n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
|+.++..+++.+...+. .-.+|+++||...|+
T Consensus 71 N~~~~~~l~~~~~~~~~---~~g~Iv~isS~~~~~ 102 (241)
T PRK12428 71 NFLGLRHLTEALLPRMA---PGGAIVNVASLAGAE 102 (241)
T ss_pred chHHHHHHHHHHHHhcc---CCcEEEEeCcHHhhc
Confidence 99999999998876531 125888998877765
No 285
>PRK08309 short chain dehydrogenase; Provisional
Probab=98.86 E-value=1.2e-08 Score=78.84 Aligned_cols=98 Identities=17% Similarity=0.042 Sum_probs=69.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc---
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ--- 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~--- 81 (211)
+++|||||||+|. +++.|+ +.||+|++++|++.... . ....+. .+.+|++|++++.+.++++..
T Consensus 2 ~vlVtGGtG~gg~-la~~L~-----~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~-~~~~Dv~d~~sv~~~i~~~l~~~g 74 (177)
T PRK08309 2 HALVIGGTGMLKR-VSLWLC-----EKGFHVSVIARREVKLENVKRESTTPESIT-PLPLDYHDDDALKLAIKSTIEKNG 74 (177)
T ss_pred EEEEECcCHHHHH-HHHHHH-----HCcCEEEEEECCHHHHHHHHHHhhcCCcEE-EEEccCCCHHHHHHHHHHHHHHcC
Confidence 6899999998876 999999 68999999999754311 0 124577 889999999988888765421
Q ss_pred ccceEEeecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCce----EEEEeec
Q 028258 82 EITNLFWVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLR----HVALLTG 133 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~----~~~~~s~ 133 (211)
.+|.+|+.. .+.+..++..+++.. +++ +|+++=|
T Consensus 75 ~id~lv~~v-------------h~~~~~~~~~~~~~~-----gv~~~~~~~~h~~g 112 (177)
T PRK08309 75 PFDLAVAWI-------------HSSAKDALSVVCREL-----DGSSETYRLFHVLG 112 (177)
T ss_pred CCeEEEEec-------------cccchhhHHHHHHHH-----ccCCCCceEEEEeC
Confidence 256665444 233456788888887 455 6665533
No 286
>KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only]
Probab=98.79 E-value=5.2e-08 Score=76.84 Aligned_cols=118 Identities=21% Similarity=0.146 Sum_probs=82.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--------CCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--------GWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--------~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+|++++||+.|+||++++++|+ .+|..+.++.-+.+. .......+- ++++|+++..++++.++.+-
T Consensus 5 GKna~vtggagGIGl~~sk~Ll-----~kgik~~~i~~~~En~~a~akL~ai~p~~~v~-F~~~DVt~~~~~~~~f~ki~ 78 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALL-----EKGIKVLVIDDSEENPEAIAKLQAINPSVSVI-FIKCDVTNRGDLEAAFDKIL 78 (261)
T ss_pred CceEEEecCCchhhHHHHHHHH-----HcCchheeehhhhhCHHHHHHHhccCCCceEE-EEEeccccHHHHHHHHHHHH
Confidence 7999999999999999999999 688886665544332 112345677 89999999988777766542
Q ss_pred c---ccceEEeecccCC-chhHHHHhhcHHHHHH----HHHHHHhcCCCCCCceEEEEeecC
Q 028258 81 Q---EITNLFWVPLQVQ-ESEEVNIFKNSTMLKN----VLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 81 ~---~~~~v~~~a~~~~-~~~~~~~~~n~~~~~~----l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
. .+|++|+.|+... .+++.+..+|+.+..+ .++.+.+..++- -.-++-.||.
T Consensus 79 ~~fg~iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~--GGiIvNmsSv 138 (261)
T KOG4169|consen 79 ATFGTIDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGK--GGIIVNMSSV 138 (261)
T ss_pred HHhCceEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCC--CcEEEEeccc
Confidence 2 3899999999865 4888999999876555 444444432222 2344666653
No 287
>PRK06720 hypothetical protein; Provisional
Probab=98.74 E-value=2.5e-08 Score=76.52 Aligned_cols=80 Identities=19% Similarity=0.052 Sum_probs=60.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
.+|+++||||+|+||+++++.|. +.|++|++++|+..... .....+. .+.+|+++.+++.+.++.+.
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~-----~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~-~~~~Dl~~~~~v~~~v~~~~ 88 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLA-----KQGAKVIVTDIDQESGQATVEEITNLGGEAL-FVSYDMEKQGDWQRVISITL 88 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHHHHhcCCcEE-EEEccCCCHHHHHHHHHHHH
Confidence 46899999999999999999999 68999999998754310 0123456 78999999988766554321
Q ss_pred ---cccceEEeecccC
Q 028258 81 ---QEITNLFWVPLQV 93 (211)
Q Consensus 81 ---~~~~~v~~~a~~~ 93 (211)
..+|.+||+|+..
T Consensus 89 ~~~G~iDilVnnAG~~ 104 (169)
T PRK06720 89 NAFSRIDMLFQNAGLY 104 (169)
T ss_pred HHcCCCCEEEECCCcC
Confidence 1389999999763
No 288
>PTZ00325 malate dehydrogenase; Provisional
Probab=98.71 E-value=3.1e-07 Score=77.31 Aligned_cols=115 Identities=11% Similarity=0.019 Sum_probs=82.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++++|+|+||+|.||+.++..|... ...+++..+++..... .+.+.... ....+.+|+.++.+.+++ .|
T Consensus 7 ~~~KI~IiGaaG~VGs~~a~~l~~~---~~~~elvL~Di~~~~g~a~Dl~~~~~~-~~v~~~td~~~~~~~l~g----aD 78 (321)
T PTZ00325 7 KMFKVAVLGAAGGIGQPLSLLLKQN---PHVSELSLYDIVGAPGVAADLSHIDTP-AKVTGYADGELWEKALRG----AD 78 (321)
T ss_pred CCCEEEEECCCCHHHHHHHHHHhcC---CCCCEEEEEecCCCcccccchhhcCcC-ceEEEecCCCchHHHhCC----CC
Confidence 3468999999999999999998731 2346799998843222 11122224 445667665555666776 57
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
.|+++++.... ++.+....|..+++++++++.++ +++++++++|--
T Consensus 79 vVVitaG~~~~~~~tR~dll~~N~~i~~~i~~~i~~~-----~~~~iviv~SNP 127 (321)
T PTZ00325 79 LVLICAGVPRKPGMTRDDLFNTNAPIVRDLVAAVASS-----APKAIVGIVSNP 127 (321)
T ss_pred EEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEecCc
Confidence 89999988542 46778899999999999999998 678888887743
No 289
>PRK06300 enoyl-(acyl carrier protein) reductase; Provisional
Probab=98.69 E-value=1.7e-06 Score=72.34 Aligned_cols=117 Identities=15% Similarity=0.063 Sum_probs=71.7
Q ss_pred CCCCeEEEEcCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCC---------CCCCC-------CCC-----CceeEEE
Q 028258 7 NPKSVALIIGVT--GISGLSLAEALKNPTTPGSPWKVYGAARRP---------PPGWF-------PTA-----LVDRYIT 63 (211)
Q Consensus 7 ~~~~~ilVtGat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~---------~~~~~-------~~~-----~~~~~i~ 63 (211)
.++|+++||||+ ..||+++++.|. ++|++|++.+|.+ ..... ... .+. .+.
T Consensus 6 ~~gk~alITGa~~~~GIG~a~A~~la-----~~Ga~Vvv~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~ 79 (299)
T PRK06300 6 LTGKIAFIAGIGDDQGYGWGIAKALA-----EAGATILVGTWVPIYKIFSQSLELGKFDASRKLSNGSLLTFAKIY-PMD 79 (299)
T ss_pred CCCCEEEEeCCCCCCCHHHHHHHHHH-----HCCCEEEEEeccchhhhhhhhcccccccccccccccchhhhhhHH-Hhh
Confidence 357999999995 999999999999 7999998866431 00000 000 011 112
Q ss_pred eeCCCHH------------------HHHHHHHh----cccccceEEeecccC----C-------chhHHHHhhcHHHHHH
Q 028258 64 FDALDPT------------------DTALKLSL----ISQEITNLFWVPLQV----Q-------ESEEVNIFKNSTMLKN 110 (211)
Q Consensus 64 ~Dl~d~~------------------~~~~~~~~----~~~~~~~v~~~a~~~----~-------~~~~~~~~~n~~~~~~ 110 (211)
.|+++++ ++.+.++. .. .+|.+||+|+.. . .++...+++|+.+..+
T Consensus 80 ~d~~~~~~v~~~i~~~~~~~~~~~~si~~~~~~v~~~~G-~lDvLVnNAG~~~~~~~~~~~~~~e~~~~~~~vNl~g~~~ 158 (299)
T PRK06300 80 ASFDTPEDVPEEIRENKRYKDLSGYTISEVAEQVKKDFG-HIDILVHSLANSPEISKPLLETSRKGYLAALSTSSYSFVS 158 (299)
T ss_pred hhcCCCEEeecccCccccccCCCHHHHHHHHHHHHHHcC-CCcEEEECCCcCcccCCChhhCCHHHHHHHHHHHhHHHHH
Confidence 3333332 24444433 33 389999998642 1 1455677999999999
Q ss_pred HHHHHHhcCCCCCCceEEEEeec
Q 028258 111 VLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 111 l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
+.+++...+... .+++.+++
T Consensus 159 l~~a~~p~m~~~---G~ii~iss 178 (299)
T PRK06300 159 LLSHFGPIMNPG---GSTISLTY 178 (299)
T ss_pred HHHHHHHHhhcC---CeEEEEee
Confidence 988887764211 34555554
No 290
>cd01336 MDH_cytoplasmic_cytosolic Cytoplasmic and cytosolic Malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are eukaryotic MDHs localized to the cytoplasm and cytosol. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.67 E-value=2.6e-07 Score=78.04 Aligned_cols=104 Identities=13% Similarity=0.050 Sum_probs=68.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCCCCCCCCceeEE------EeeCCCHHHHHHHHHhccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPGWFPTALVDRYI------TFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~~~~~~~~~~~i------~~Dl~d~~~~~~~~~~~~~ 81 (211)
-+|+||||+|++|++++..|+..+-- .++++|+++++++..........+ +. ..|+....++.+.+++
T Consensus 3 ~kV~I~GAaG~VG~~la~~L~~~~~~~~~~~~el~L~D~~~~~~~~~g~~~D-l~d~~~~~~~~~~~~~~~~~~l~~--- 78 (325)
T cd01336 3 IRVLVTGAAGQIAYSLLPMIAKGDVFGPDQPVILHLLDIPPALKALEGVVME-LQDCAFPLLKSVVATTDPEEAFKD--- 78 (325)
T ss_pred eEEEEECCCCHHHHHHHHHHHhCcccCCCCCcEEEEEEcCCccccccceeee-hhhccccccCCceecCCHHHHhCC---
Confidence 47999999999999999999831110 134689999996542111110111 11 1133333445556665
Q ss_pred ccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+|.|||+|+.... +..+.++.|+...+.+.+.+.++
T Consensus 79 -aDiVI~tAG~~~~~~~~R~~l~~~N~~i~~~i~~~i~~~ 117 (325)
T cd01336 79 -VDVAILVGAMPRKEGMERKDLLKANVKIFKEQGEALDKY 117 (325)
T ss_pred -CCEEEEeCCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 6899999998543 44678899999999999988887
No 291
>KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only]
Probab=98.67 E-value=1.3e-06 Score=72.06 Aligned_cols=157 Identities=14% Similarity=0.099 Sum_probs=101.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-----CCCCCCceeEEEeeCCCHHHHHHHHHhccc-
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-----WFPTALVDRYITFDALDPTDTALKLSLISQ- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-----~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~- 81 (211)
..|-|||||.=...|+.++++|. ++|+.|.+---.++.. +...++.+ .+..|+++++++.++.+-+..
T Consensus 28 ~~k~VlITGCDSGfG~~LA~~L~-----~~Gf~V~Agcl~~~gae~L~~~~~s~rl~-t~~LDVT~~esi~~a~~~V~~~ 101 (322)
T KOG1610|consen 28 SDKAVLITGCDSGFGRLLAKKLD-----KKGFRVFAGCLTEEGAESLRGETKSPRLR-TLQLDVTKPESVKEAAQWVKKH 101 (322)
T ss_pred CCcEEEEecCCcHHHHHHHHHHH-----hcCCEEEEEeecCchHHHHhhhhcCCcce-eEeeccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999 7999988755443321 11267888 999999999998887653321
Q ss_pred ----ccceEEeecccCC----------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCcccc
Q 028258 82 ----EITNLFWVPLQVQ----------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLA 147 (211)
Q Consensus 82 ----~~~~v~~~a~~~~----------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~ 147 (211)
....+||+||... .++....++|..|+..+..++....+ ..-.|++.+||..
T Consensus 102 l~~~gLwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr--~arGRvVnvsS~~------------ 167 (322)
T KOG1610|consen 102 LGEDGLWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLR--RARGRVVNVSSVL------------ 167 (322)
T ss_pred cccccceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHH--hccCeEEEecccc------------
Confidence 2667999998532 13445678998876665555443321 0125778887632
Q ss_pred CCCCCCCCCCcCCCCCCCCCCcchhHHHHHhh-----cCCCceEEEecCC
Q 028258 148 GQLMPYEVPFKEDSSRLPFPNFYYELEDVSAS-----YSPAITYSVHRSS 192 (211)
Q Consensus 148 g~~~~~~~~~~e~~~~~~~~~~~~~~e~~l~~-----~~~~~~~~i~Rp~ 192 (211)
| ..+.+--- +...+.++.|.+... +..|+++.++-||
T Consensus 168 G-----R~~~p~~g---~Y~~SK~aVeaf~D~lR~EL~~fGV~VsiiePG 209 (322)
T KOG1610|consen 168 G-----RVALPALG---PYCVSKFAVEAFSDSLRRELRPFGVKVSIIEPG 209 (322)
T ss_pred c-----CccCcccc---cchhhHHHHHHHHHHHHHHHHhcCcEEEEeccC
Confidence 1 00000000 112334554443222 5679999999999
No 292
>KOG4288 consensus Predicted oxidoreductase [General function prediction only]
Probab=98.66 E-value=3.3e-08 Score=77.96 Aligned_cols=149 Identities=15% Similarity=0.094 Sum_probs=99.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
...++.|+.||.|+++|+... ..++.|-.+.|+..+..+ ....+. |+.+|.....-+...+.+ +..++
T Consensus 53 e~tlvlggnpfsgs~vlk~A~-----~vv~svgilsen~~k~~l~sw~~~vs-wh~gnsfssn~~k~~l~g----~t~v~ 122 (283)
T KOG4288|consen 53 EWTLVLGGNPFSGSEVLKNAT-----NVVHSVGILSENENKQTLSSWPTYVS-WHRGNSFSSNPNKLKLSG----PTFVY 122 (283)
T ss_pred HHHhhhcCCCcchHHHHHHHH-----hhceeeeEeecccCcchhhCCCcccc-hhhccccccCcchhhhcC----CcccH
Confidence 567899999999999999999 799999999998654221 135667 788887765545555554 34454
Q ss_pred eecccCCchhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCCCcCCCCCCCCC
Q 028258 88 WVPLQVQESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVPFKEDSSRLPFP 167 (211)
Q Consensus 88 ~~a~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~~~e~~~~~~~~ 167 (211)
-+++... +...+.++|.....+.++++.+. ++++|+|+|.. .|+-+ |. .|
T Consensus 123 e~~ggfg-n~~~m~~ing~ani~a~kaa~~~-----gv~~fvyISa~-d~~~~---------------~~--------i~ 172 (283)
T KOG4288|consen 123 EMMGGFG-NIILMDRINGTANINAVKAAAKA-----GVPRFVYISAH-DFGLP---------------PL--------IP 172 (283)
T ss_pred HHhcCcc-chHHHHHhccHhhHHHHHHHHHc-----CCceEEEEEhh-hcCCC---------------Cc--------cc
Confidence 4554332 34456678888777888888776 78999999762 23211 10 11
Q ss_pred Ccch----hHHHHHhhcCCCceEEEecCCceEecCC
Q 028258 168 NFYY----ELEDVSASYSPAITYSVHRSSVIIGASP 199 (211)
Q Consensus 168 ~~~~----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~ 199 (211)
.-|+ ..|..+.. ...+.-+++|||.|||...
T Consensus 173 rGY~~gKR~AE~Ell~-~~~~rgiilRPGFiyg~R~ 207 (283)
T KOG4288|consen 173 RGYIEGKREAEAELLK-KFRFRGIILRPGFIYGTRN 207 (283)
T ss_pred hhhhccchHHHHHHHH-hcCCCceeeccceeecccc
Confidence 2222 33444443 3457889999999999855
No 293
>KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism]
Probab=98.65 E-value=4.3e-08 Score=80.60 Aligned_cols=116 Identities=16% Similarity=0.030 Sum_probs=78.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------C--CCCCceeEEEeeCCCHHH----HHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------F--PTALVDRYITFDALDPTD----TALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~--~~~~~~~~i~~Dl~d~~~----~~~~~ 76 (211)
++=+.|||||.+||++.+++|+ ++|++|+.++|++++.. . ..-.++ ++.+|+++++. +.+.+
T Consensus 49 g~WAVVTGaTDGIGKayA~eLA-----krG~nvvLIsRt~~KL~~v~kEI~~~~~vev~-~i~~Dft~~~~~ye~i~~~l 122 (312)
T KOG1014|consen 49 GSWAVVTGATDGIGKAYARELA-----KRGFNVVLISRTQEKLEAVAKEIEEKYKVEVR-IIAIDFTKGDEVYEKLLEKL 122 (312)
T ss_pred CCEEEEECCCCcchHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHHHHHHhCcEEE-EEEEecCCCchhHHHHHHHh
Confidence 4568999999999999999999 79999999999987631 1 123466 88999998865 44445
Q ss_pred HhcccccceEEeecccCCchhH-----------HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 77 SLISQEITNLFWVPLQVQESEE-----------VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~~~~-----------~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.+++ +.++|++++.....+. +...+|..++..+.+.+...|-.. +-..++.++|
T Consensus 123 ~~~~--VgILVNNvG~~~~~P~~f~~~~~~~~~~ii~vN~~~~~~~t~~ilp~M~~r-~~G~IvnigS 187 (312)
T KOG1014|consen 123 AGLD--VGILVNNVGMSYDYPESFLKYPEGELQNIINVNILSVTLLTQLILPGMVER-KKGIIVNIGS 187 (312)
T ss_pred cCCc--eEEEEecccccCCCcHHHHhCchhhhhheeEEecchHHHHHHHhhhhhhcC-CCceEEEecc
Confidence 5554 7889999988653221 234667776655555554433000 2234555554
No 294
>PLN00106 malate dehydrogenase
Probab=98.60 E-value=6.2e-07 Score=75.52 Aligned_cols=112 Identities=10% Similarity=-0.044 Sum_probs=78.7
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+++|.|+||+|.||+.++..|... ....++..+++++... .+.+.... ....++.+.+++.+.+++ .|+
T Consensus 18 ~~KV~IiGaaG~VG~~~a~~l~~~---~~~~el~L~Di~~~~g~a~Dl~~~~~~-~~i~~~~~~~d~~~~l~~----aDi 89 (323)
T PLN00106 18 GFKVAVLGAAGGIGQPLSLLMKMN---PLVSELHLYDIANTPGVAADVSHINTP-AQVRGFLGDDQLGDALKG----ADL 89 (323)
T ss_pred CCEEEEECCCCHHHHHHHHHHHhC---CCCCEEEEEecCCCCeeEchhhhCCcC-ceEEEEeCCCCHHHHcCC----CCE
Confidence 568999999999999999999831 2234788898876321 11122223 334455444456666776 688
Q ss_pred EEeecccCC---chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 86 LFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 86 v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
|+++|+... .++.+....|...++++++.+.++ +...+++.+|
T Consensus 90 VVitAG~~~~~g~~R~dll~~N~~i~~~i~~~i~~~-----~p~aivivvS 135 (323)
T PLN00106 90 VIIPAGVPRKPGMTRDDLFNINAGIVKTLCEAVAKH-----CPNALVNIIS 135 (323)
T ss_pred EEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH-----CCCeEEEEeC
Confidence 999998754 357778899999999999999988 4566666655
No 295
>PRK09620 hypothetical protein; Provisional
Probab=98.54 E-value=3e-07 Score=73.81 Aligned_cols=79 Identities=10% Similarity=-0.127 Sum_probs=52.9
Q ss_pred CCCeEEEEcCC----------------ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCC
Q 028258 8 PKSVALIIGVT----------------GISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALD 68 (211)
Q Consensus 8 ~~~~ilVtGat----------------G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d 68 (211)
.+|+||||+|. ||+|++|+++|+ ..|++|+++++.....+. ....+. .+..|...
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~itN~SSGfiGs~LA~~L~-----~~Ga~V~li~g~~~~~~~~~~~~~~~~-~V~s~~d~ 75 (229)
T PRK09620 2 KGKKVLITSGGCLEKWDQVRGHTNMAKGTIGRIIAEELI-----SKGAHVIYLHGYFAEKPNDINNQLELH-PFEGIIDL 75 (229)
T ss_pred CCCEEEEeCCCccCCcCCeeEecCCCcCHHHHHHHHHHH-----HCCCeEEEEeCCCcCCCcccCCceeEE-EEecHHHH
Confidence 46899999875 999999999999 799999988864321111 112233 34443333
Q ss_pred HHHHHHHHHhcccccceEEeecccCC
Q 028258 69 PTDTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 69 ~~~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
.+.+.+.+...+ +|.|||+|+...
T Consensus 76 ~~~l~~~~~~~~--~D~VIH~AAvsD 99 (229)
T PRK09620 76 QDKMKSIITHEK--VDAVIMAAAGSD 99 (229)
T ss_pred HHHHHHHhcccC--CCEEEECccccc
Confidence 345666665333 799999998854
No 296
>PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B ....
Probab=98.51 E-value=2.8e-07 Score=74.14 Aligned_cols=110 Identities=12% Similarity=-0.079 Sum_probs=77.5
Q ss_pred cCC--ChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----C--CCCCCceeEEEeeCCCHHHHHHHHHhcc----ccc
Q 028258 16 GVT--GISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----W--FPTALVDRYITFDALDPTDTALKLSLIS----QEI 83 (211)
Q Consensus 16 Gat--G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~--~~~~~~~~~i~~Dl~d~~~~~~~~~~~~----~~~ 83 (211)
|++ +.||++++++|+ ++|++|++++|+..+. . ......+ ++.+|++|++++...++.+. ..+
T Consensus 1 g~~~s~GiG~aia~~l~-----~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~i 74 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALA-----EEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRI 74 (241)
T ss_dssp STSSTSHHHHHHHHHHH-----HTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSE
T ss_pred CCCCCCChHHHHHHHHH-----HCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCe
Confidence 667 999999999999 7999999999987641 0 1123466 89999999988777765421 138
Q ss_pred ceEEeecccCCc-------------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 84 TNLFWVPLQVQE-------------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 84 ~~v~~~a~~~~~-------------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
|++||+++.... .+...+++|+.++..+.+++.+.+ .+-..++++|+.
T Consensus 75 D~lV~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~gsii~iss~ 135 (241)
T PF13561_consen 75 DILVNNAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLM---KKGGSIINISSI 135 (241)
T ss_dssp SEEEEEEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHH---HHEEEEEEEEEG
T ss_pred EEEEecccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHH---hhCCCcccccch
Confidence 999999866332 234567888888877777775542 122566777653
No 297
>KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.44 E-value=1.9e-07 Score=70.87 Aligned_cols=100 Identities=16% Similarity=-0.008 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC---CCCCC-ceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW---FPTAL-VDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~---~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.++.+++|||.-+||+.++..|. +.|.+|++++|++.... ...+. ++ .+.+|+.+-+.+.+.+..+.. +
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La-----~aGA~ViAvaR~~a~L~sLV~e~p~~I~-Pi~~Dls~wea~~~~l~~v~p-i 78 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLA-----KAGAQVIAVARNEANLLSLVKETPSLII-PIVGDLSAWEALFKLLVPVFP-I 78 (245)
T ss_pred cceEEEeecccccccHHHHHHHH-----hcCCEEEEEecCHHHHHHHHhhCCccee-eeEecccHHHHHHHhhcccCc-h
Confidence 46899999999999999999999 69999999999876421 12343 77 999999998888888877654 7
Q ss_pred ceEEeecccCC---------chhHHHHhhcHHHHHHHHHH
Q 028258 84 TNLFWVPLQVQ---------ESEEVNIFKNSTMLKNVLSV 114 (211)
Q Consensus 84 ~~v~~~a~~~~---------~~~~~~~~~n~~~~~~l~~~ 114 (211)
|.+++.|+... .+.+..+++|+.+..++.+.
T Consensus 79 dgLVNNAgvA~~~pf~eiT~q~fDr~F~VNvravi~v~Q~ 118 (245)
T KOG1207|consen 79 DGLVNNAGVATNHPFGEITQQSFDRTFAVNVRAVILVAQL 118 (245)
T ss_pred hhhhccchhhhcchHHHHhHHhhcceeeeeeeeeeeHHHH
Confidence 88888876532 12334568888776665554
No 298
>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]
Probab=98.38 E-value=2e-06 Score=73.70 Aligned_cols=73 Identities=19% Similarity=0.103 Sum_probs=59.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
++|||+|| |+||+.++..|++ ...++|++.+|++++.. ...++++ .+.+|+.|.+++.+++++ .|.
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~----~~d~~V~iAdRs~~~~~~i~~~~~~~v~-~~~vD~~d~~al~~li~~----~d~ 71 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQ----NGDGEVTIADRSKEKCARIAELIGGKVE-ALQVDAADVDALVALIKD----FDL 71 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHh----CCCceEEEEeCCHHHHHHHHhhccccce-eEEecccChHHHHHHHhc----CCE
Confidence 67999997 9999999999995 33389999999876421 1235899 999999999999999998 467
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
||+++-.
T Consensus 72 VIn~~p~ 78 (389)
T COG1748 72 VINAAPP 78 (389)
T ss_pred EEEeCCc
Confidence 8888744
No 299
>KOG2774 consensus NAD dependent epimerase [General function prediction only]
Probab=98.34 E-value=8.9e-07 Score=70.39 Aligned_cols=115 Identities=22% Similarity=0.215 Sum_probs=78.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeC-CCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAAR-RPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R-~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
..+|||||+-|.+|..++..|.. .-|-+ |+.-+- +++... ...-- +|..|+.|...+++.+-+.. +|-+
T Consensus 44 ~PrvLITG~LGQLG~~~A~LLR~----~yGs~~VILSDI~KPp~~V--~~~GP-yIy~DILD~K~L~eIVVn~R--IdWL 114 (366)
T KOG2774|consen 44 APRVLITGSLGQLGRGLASLLRY----MYGSECVILSDIVKPPANV--TDVGP-YIYLDILDQKSLEEIVVNKR--IDWL 114 (366)
T ss_pred CCeEEEecchHHHhHHHHHHHHH----HhCCccEehhhccCCchhh--cccCC-chhhhhhccccHHHhhcccc--ccee
Confidence 46899999999999999999974 34544 554433 333221 12334 78899999988888876543 7888
Q ss_pred EeecccCCc-hhH---HHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCeeee
Q 028258 87 FWVPLQVQE-SEE---VNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYM 138 (211)
Q Consensus 87 ~~~a~~~~~-~~~---~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~ 138 (211)
||..+.-+. .+. -..++|+.|..|+++.+.++ +++-| .-|+...||
T Consensus 115 ~HfSALLSAvGE~NVpLA~~VNI~GvHNil~vAa~~-----kL~iF-VPSTIGAFG 164 (366)
T KOG2774|consen 115 VHFSALLSAVGETNVPLALQVNIRGVHNILQVAAKH-----KLKVF-VPSTIGAFG 164 (366)
T ss_pred eeHHHHHHHhcccCCceeeeecchhhhHHHHHHHHc-----CeeEe-ecccccccC
Confidence 888655322 221 23588999999999999887 56643 334555554
No 300
>PRK06732 phosphopantothenate--cysteine ligase; Validated
Probab=98.33 E-value=2.7e-06 Score=68.40 Aligned_cols=68 Identities=15% Similarity=0.077 Sum_probs=46.3
Q ss_pred CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH--HHHHHHHHhcccccceEEeecccCC
Q 028258 17 VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDP--TDTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 17 atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~--~~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
+|||+|++|+++|+ ++||+|+++.|+.........+++ ++.++..+. +.+.+.++ . +|+|||+|+...
T Consensus 24 SSG~iG~aLA~~L~-----~~G~~V~li~r~~~~~~~~~~~v~-~i~v~s~~~m~~~l~~~~~---~-~DivIh~AAvsd 93 (229)
T PRK06732 24 STGQLGKIIAETFL-----AAGHEVTLVTTKTAVKPEPHPNLS-IIEIENVDDLLETLEPLVK---D-HDVLIHSMAVSD 93 (229)
T ss_pred cchHHHHHHHHHHH-----hCCCEEEEEECcccccCCCCCCeE-EEEEecHHHHHHHHHHHhc---C-CCEEEeCCccCC
Confidence 68999999999999 699999999876432211234677 776544322 22333333 2 789999998764
No 301
>PRK05086 malate dehydrogenase; Provisional
Probab=98.33 E-value=7.8e-06 Score=68.71 Aligned_cols=110 Identities=13% Similarity=0.023 Sum_probs=71.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC----CCCC-CCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG----WFPT-ALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~----~~~~-~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
++++|+||||.||++++..|... ...++++.+++|++... ...+ +... .+.+ .+.+++.+.+++ .|
T Consensus 1 ~KI~IIGAsG~VG~aia~~l~~~--~~~~~el~L~d~~~~~~g~alDl~~~~~~~-~i~~--~~~~d~~~~l~~----~D 71 (312)
T PRK05086 1 MKVAVLGAAGGIGQALALLLKTQ--LPAGSELSLYDIAPVTPGVAVDLSHIPTAV-KIKG--FSGEDPTPALEG----AD 71 (312)
T ss_pred CEEEEECCCCHHHHHHHHHHHcC--CCCccEEEEEecCCCCcceehhhhcCCCCc-eEEE--eCCCCHHHHcCC----CC
Confidence 47999999999999999988521 03456788888864421 1112 1122 2332 112233344554 68
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeec
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTG 133 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~ 133 (211)
.||.+++.... +..+....|...+.++++.+.++ +.++++.+.+
T Consensus 72 iVIitaG~~~~~~~~R~dll~~N~~i~~~ii~~i~~~-----~~~~ivivvs 118 (312)
T PRK05086 72 VVLISAGVARKPGMDRSDLFNVNAGIVKNLVEKVAKT-----CPKACIGIIT 118 (312)
T ss_pred EEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh-----CCCeEEEEcc
Confidence 88889887442 35567888999999999999987 4566666554
No 302
>TIGR00715 precor6x_red precorrin-6x reductase. This enzyme was found to be a monomer by gel filtration.
Probab=98.30 E-value=1e-05 Score=66.02 Aligned_cols=73 Identities=19% Similarity=0.136 Sum_probs=56.1
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|||+||||. |+.|+++|. +.||+|++..|...... ....+.. .+..+..|.+++.+.+.+.+ ++.|+++
T Consensus 2 ~ILvlGGT~e-gr~la~~L~-----~~g~~v~~s~~t~~~~~~~~~~g~~-~v~~g~l~~~~l~~~l~~~~--i~~VIDA 72 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLI-----AQGIEILVTVTTSEGKHLYPIHQAL-TVHTGALDPQELREFLKRHS--IDILVDA 72 (256)
T ss_pred eEEEEechHH-HHHHHHHHH-----hCCCeEEEEEccCCccccccccCCc-eEEECCCCHHHHHHHHHhcC--CCEEEEc
Confidence 6999999999 999999999 68999999999876432 1223344 55677778888888887765 7888887
Q ss_pred ccc
Q 028258 90 PLQ 92 (211)
Q Consensus 90 a~~ 92 (211)
+..
T Consensus 73 tHP 75 (256)
T TIGR00715 73 THP 75 (256)
T ss_pred CCH
Confidence 643
No 303
>PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated
Probab=98.21 E-value=8.4e-06 Score=70.62 Aligned_cols=78 Identities=13% Similarity=-0.027 Sum_probs=59.2
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
+.+|++||||| ||.+|.+++++|. ..|++|++++++..... .. . ...+|+++.+
T Consensus 186 l~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~-----~~Ga~V~~v~~~~~~~~--~~--~-~~~~dv~~~~ 255 (399)
T PRK05579 186 LAGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAA-----RRGADVTLVSGPVNLPT--PA--G-VKRIDVESAQ 255 (399)
T ss_pred cCCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHH-----HCCCEEEEeCCCccccC--CC--C-cEEEccCCHH
Confidence 45789999999 8999999999999 79999999988653211 12 2 3467999988
Q ss_pred HHHHHHHhcccccceEEeecccCC
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
++.+++...-..+|++|++|+...
T Consensus 256 ~~~~~v~~~~~~~DilI~~Aav~d 279 (399)
T PRK05579 256 EMLDAVLAALPQADIFIMAAAVAD 279 (399)
T ss_pred HHHHHHHHhcCCCCEEEEcccccc
Confidence 877777543223899999998643
No 304
>KOG1478 consensus 3-keto sterol reductase [Lipid transport and metabolism]
Probab=98.19 E-value=1e-05 Score=65.01 Aligned_cols=85 Identities=19% Similarity=0.199 Sum_probs=58.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC---------CCC--CCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG---------WFP--TALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~---------~~~--~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
||.|.+||||+++.+|-+||.+|++-.....-..+....|+.++. ... .-.++ ++..|+++..++..+
T Consensus 1 ~~RKvalITGanSglGl~i~~RLl~~~De~~~ltl~ltcR~~~kae~vc~~lk~f~p~~~i~~~-yvlvD~sNm~Sv~~A 79 (341)
T KOG1478|consen 1 MMRKVALITGANSGLGLAICKRLLAEDDENVRLTLCLTCRNMSKAEAVCAALKAFHPKSTIEVT-YVLVDVSNMQSVFRA 79 (341)
T ss_pred CCceEEEEecCCCcccHHHHHHHHhccCCceeEEEEEEeCChhHHHHHHHHHHHhCCCceeEEE-EEEEehhhHHHHHHH
Confidence 577999999999999999999999511101113355566765542 111 34678 899999999888777
Q ss_pred HHhccc---ccceEEeeccc
Q 028258 76 LSLISQ---EITNLFWVPLQ 92 (211)
Q Consensus 76 ~~~~~~---~~~~v~~~a~~ 92 (211)
.+++.. .+|.|+-.|+.
T Consensus 80 ~~di~~rf~~ld~iylNAg~ 99 (341)
T KOG1478|consen 80 SKDIKQRFQRLDYIYLNAGI 99 (341)
T ss_pred HHHHHHHhhhccEEEEcccc
Confidence 766543 37787766654
No 305
>cd00704 MDH Malate dehydrogenase. Malate dehydrogenase (MDH) is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. MDHs belong to the NAD-dependent, lactate dehydrogenase (LDH)-like, 2-hydroxycarboxylate dehydrogenase family, which also includes the GH4 family of glycoside hydrolases. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=98.18 E-value=3.2e-05 Score=65.28 Aligned_cols=98 Identities=17% Similarity=0.123 Sum_probs=67.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCH-----------HHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPPGWFPTALVDRYITFDALDP-----------TDTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~-----------~~~~~~~~ 77 (211)
+|.|+||+|.||+.++..|+..+--. ..+++..+++++.. +..+ ....|+.|. ....+.++
T Consensus 2 KV~IiGAaG~VG~~~a~~L~~~~~~~~~~~~~l~L~Di~~~~-----~~~~-g~~~Dl~d~~~~~~~~~~i~~~~~~~~~ 75 (323)
T cd00704 2 HVLITGAAGQIGYNLLFLIASGELFGDDQPVILHLLDIPPAM-----KALE-GVVMELQDCAFPLLKGVVITTDPEEAFK 75 (323)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCccCCCCceEEEEEecCCcc-----Cccc-eeeeehhhhcccccCCcEEecChHHHhC
Confidence 68999999999999999988411101 23468888887621 1233 445555554 22334455
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+++|+.+.. +..+....|...++.+...+.+.
T Consensus 76 ~----aDiVVitAG~~~~~g~tR~dll~~N~~i~~~i~~~i~~~ 115 (323)
T cd00704 76 D----VDVAILVGAFPRKPGMERADLLRKNAKIFKEQGEALNKV 115 (323)
T ss_pred C----CCEEEEeCCCCCCcCCcHHHHHHHhHHHHHHHHHHHHHh
Confidence 4 6889999988542 45567788999999999999887
No 306
>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase. Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.
Probab=98.16 E-value=1.1e-05 Score=69.59 Aligned_cols=72 Identities=24% Similarity=0.269 Sum_probs=54.2
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
|+|.|| |++|+.+++.|++ ...+ +|++.+|+..+.. ....+++ ++.+|+.|.+++.+.+++ .|.
T Consensus 1 IlvlG~-G~vG~~~~~~L~~----~~~~~~v~va~r~~~~~~~~~~~~~~~~~~-~~~~d~~~~~~l~~~~~~----~dv 70 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLAR----RGPFEEVTVADRNPEKAERLAEKLLGDRVE-AVQVDVNDPESLAELLRG----CDV 70 (386)
T ss_dssp EEEE---SHHHHHHHHHHHC----TTCE-EEEEEESSHHHHHHHHT--TTTTEE-EEE--TTTHHHHHHHHTT----SSE
T ss_pred CEEEcC-cHHHHHHHHHHhc----CCCCCcEEEEECCHHHHHHHHhhcccccee-EEEEecCCHHHHHHHHhc----CCE
Confidence 789999 9999999999995 4456 8999999876421 1357889 999999999999999887 478
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
|++|++..
T Consensus 71 Vin~~gp~ 78 (386)
T PF03435_consen 71 VINCAGPF 78 (386)
T ss_dssp EEE-SSGG
T ss_pred EEECCccc
Confidence 99998765
No 307
>TIGR01758 MDH_euk_cyt malate dehydrogenase, NAD-dependent. This model represents the NAD-dependent cytosolic malate dehydrogenase from eukaryotes. The enzyme from pig has been studied by X-ray crystallography
Probab=98.10 E-value=5e-05 Score=64.16 Aligned_cols=98 Identities=15% Similarity=0.167 Sum_probs=67.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCC--CCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-----------HHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPG--SPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-----------DTALKLS 77 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~--~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-----------~~~~~~~ 77 (211)
+|.|+||+|.||++++..|...+--. +.++++.+++++... ..+ -...|+.|.. ...+.++
T Consensus 1 ~V~IiGaaG~VG~~~a~~l~~~~~~~~~~e~el~LiD~~~~~~-----~a~-g~~~Dl~d~~~~~~~~~~~~~~~~~~~~ 74 (324)
T TIGR01758 1 RVVVTGAAGQIGYALLPMIARGRMLGKDQPIILHLLDIPPAMK-----VLE-GVVMELMDCAFPLLDGVVPTHDPAVAFT 74 (324)
T ss_pred CEEEECCCcHHHHHHHHHHHhccccCCCCccEEEEEecCCccc-----ccc-eeEeehhcccchhcCceeccCChHHHhC
Confidence 58999999999999999998311101 334688898865531 123 4455666554 1223344
Q ss_pred hcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+++|+.... ++.+....|+..++.+.+.+.++
T Consensus 75 ~----aDiVVitAG~~~~~~~tr~~ll~~N~~i~k~i~~~i~~~ 114 (324)
T TIGR01758 75 D----VDVAILVGAFPRKEGMERRDLLSKNVKIFKEQGRALDKL 114 (324)
T ss_pred C----CCEEEEcCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3 6889999988543 46677899999999999999887
No 308
>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.08 E-value=3.8e-06 Score=63.83 Aligned_cols=106 Identities=18% Similarity=-0.013 Sum_probs=80.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhccc--
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLISQ-- 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~-- 81 (211)
++-..||||+.+.+|++.+++|. .+|..|..++-..++.. ....++- +...|++.+.++..++...+.
T Consensus 8 kglvalvtggasglg~ataerla-----kqgasv~lldlp~skg~~vakelg~~~v-f~padvtsekdv~aala~ak~kf 81 (260)
T KOG1199|consen 8 KGLVALVTGGASGLGKATAERLA-----KQGASVALLDLPQSKGADVAKELGGKVV-FTPADVTSEKDVRAALAKAKAKF 81 (260)
T ss_pred cCeeEEeecCcccccHHHHHHHH-----hcCceEEEEeCCcccchHHHHHhCCceE-EeccccCcHHHHHHHHHHHHhhc
Confidence 45679999999999999999999 69999999887555421 1246677 889999999988888866543
Q ss_pred -ccceEEeecccCCc---------------hhHHHHhhcHHHHHHHHHHHHhcC
Q 028258 82 -EITNLFWVPLQVQE---------------SEEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 82 -~~~~v~~~a~~~~~---------------~~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
..|..++||+.... +....+++|+.|+.|+++.....|
T Consensus 82 grld~~vncagia~a~ktyn~~k~~~h~ledfqrvidvn~~gtfnvirl~aglm 135 (260)
T KOG1199|consen 82 GRLDALVNCAGIAYAFKTYNVQKKKHHDLEDFQRVIDVNVLGTFNVIRLGAGLM 135 (260)
T ss_pred cceeeeeeccceeeeeeeeeecccccccHHHhhheeeeeeeeeeeeeeehhhhh
Confidence 48899999976321 233456889999999887665554
No 309
>PRK13656 trans-2-enoyl-CoA reductase; Provisional
Probab=98.08 E-value=1.8e-05 Score=67.84 Aligned_cols=79 Identities=22% Similarity=0.280 Sum_probs=57.9
Q ss_pred CCCeEEEEcCCChHHHH--HHHHhhCCCCCCCCcEEEEEeCCCC--C------CC---------CC--CCCceeEEEeeC
Q 028258 8 PKSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAARRPP--P------GW---------FP--TALVDRYITFDA 66 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~--l~~~L~~~~~~~~g~~V~~~~R~~~--~------~~---------~~--~~~~~~~i~~Dl 66 (211)
-+|++|||||++.+|.+ +++.| + .|++|+++++... . .| .. ...+. .+.+|+
T Consensus 40 ggK~aLVTGaSsGIGlA~~IA~al-~-----~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~-~i~~DV 112 (398)
T PRK13656 40 GPKKVLVIGASSGYGLASRIAAAF-G-----AGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAK-SINGDA 112 (398)
T ss_pred CCCEEEEECCCchHhHHHHHHHHH-H-----cCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceE-EEEcCC
Confidence 36899999999999999 89999 5 7888888875321 1 01 01 12355 789999
Q ss_pred CCHHHHHHHHHhccc---ccceEEeecccC
Q 028258 67 LDPTDTALKLSLISQ---EITNLFWVPLQV 93 (211)
Q Consensus 67 ~d~~~~~~~~~~~~~---~~~~v~~~a~~~ 93 (211)
++++.+.+.++.+.. .+|.++|+++..
T Consensus 113 ss~E~v~~lie~I~e~~G~IDiLVnSaA~~ 142 (398)
T PRK13656 113 FSDEIKQKVIELIKQDLGQVDLVVYSLASP 142 (398)
T ss_pred CCHHHHHHHHHHHHHhcCCCCEEEECCccC
Confidence 999888777665532 389999998765
No 310
>KOG1204 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]
Probab=98.08 E-value=1.7e-05 Score=62.73 Aligned_cols=125 Identities=10% Similarity=-0.052 Sum_probs=72.6
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE--EEEEeCCCCCCC-C---CCCCceeEEEeeCCCHHHHHH---
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK--VYGAARRPPPGW-F---PTALVDRYITFDALDPTDTAL--- 74 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~--V~~~~R~~~~~~-~---~~~~~~~~i~~Dl~d~~~~~~--- 74 (211)
|.-+|.+.+||||||..||..++..+. +.+-+ +.+..|...... + ...... ...+|+++...+..
T Consensus 1 m~~~~r~villTGaSrgiG~~~v~~i~-----aed~e~~r~g~~r~~a~~~~L~v~~gd~~v-~~~g~~~e~~~l~al~e 74 (253)
T KOG1204|consen 1 MDLNMRKVILLTGASRGIGTGSVATIL-----AEDDEALRYGVARLLAELEGLKVAYGDDFV-HVVGDITEEQLLGALRE 74 (253)
T ss_pred CCcccceEEEEecCCCCccHHHHHHHH-----hcchHHHHHhhhcccccccceEEEecCCcc-eechHHHHHHHHHHHHh
Confidence 566788999999999999999999888 34444 444444333210 0 011222 34455555432222
Q ss_pred HHHhcccccceEEeecccCC------------chhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecC
Q 028258 75 KLSLISQEITNLFWVPLQVQ------------ESEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGT 134 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~------------~~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~ 134 (211)
+.+.-...-+.|||.||... ..|..+|+.|+.+...|...+.......|-.+.++++||.
T Consensus 75 ~~r~k~gkr~iiI~NAG~lgdvsk~~~~~~D~~qw~ky~~~NlfS~VsL~~~~l~~lk~~p~~~~vVnvSS~ 146 (253)
T KOG1204|consen 75 APRKKGGKRDIIIHNAGSLGDVSKGAVDLGDSDQWKKYWDLNLFSMVSLVQWALPKLKKSPVNGNVVNVSSL 146 (253)
T ss_pred hhhhcCCceeEEEecCCCccchhhccCCcccHHHHHHHHHhhhhhHHhhHHHHHHHhcCCCccCeEEEecch
Confidence 22211112678999998632 1477789999887766666444332112223667777763
No 311
>KOG3019 consensus Predicted nucleoside-diphosphate sugar epimerase [Nucleotide transport and metabolism]
Probab=98.07 E-value=1.1e-05 Score=63.92 Aligned_cols=164 Identities=13% Similarity=0.089 Sum_probs=91.5
Q ss_pred CCCeEEEEcCCChHHHHHHH-----HhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-HHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAE-----ALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-DTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~-----~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~~ 81 (211)
|.+++++-+.+|+|+..|.. ++-+-.+ ++.|+|++++|.+.+. ++. |-+.|..-.- ++....
T Consensus 11 ~sr~a~~~~~~g~i~~nl~~~~~~~H~t~~~~-a~~h~vtv~sR~pg~~-----rit-w~el~~~Gip~sc~a~v----- 78 (315)
T KOG3019|consen 11 KSRDAVSNWSNGIIRENLGSETSCCHDTNVHS-ADNHAVTVLSRSPGKA-----RIT-WPELDFPGIPISCVAGV----- 78 (315)
T ss_pred ccccCCCCccccchhccccCcccccccCCCCc-ccccceEEEecCCCCc-----ccc-cchhcCCCCceehHHHH-----
Confidence 45778889999999988877 4442222 3458999999988753 222 3222222110 111111
Q ss_pred ccceEEeecccCCchhHHHHhhcH-----HHHHHHHHHHHhcCCCCCCceEEEEeecCeeeecccCCccccCCCCCCCCC
Q 028258 82 EITNLFWVPLQVQESEEVNIFKNS-----TMLKNVLSVLVSSNSGRSRLRHVALLTGTKHYMGPIFDPSLAGQLMPYEVP 156 (211)
Q Consensus 82 ~~~~v~~~a~~~~~~~~~~~~~n~-----~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~~y~~~~~~~~~~g~~~~~~~~ 156 (211)
..+...+...-..|...++.|+ ..+..|.+++..+ -..-+.++.+|+..+|-.+. ...
T Consensus 79 --na~g~n~l~P~rRWsp~fqkev~gSRi~~t~~la~aI~~a---Pq~~~~~Vlv~gva~y~pS~------------s~e 141 (315)
T KOG3019|consen 79 --NAVGNNALLPIRRWSPEFQKEVKGSRIRVTSKLADAINNA---PQEARPTVLVSGVAVYVPSE------------SQE 141 (315)
T ss_pred --hhhhhhccCchhhcCHHHHHHhhcceeeHHHHHHHHHhcC---CCCCCCeEEEEeeEEecccc------------ccc
Confidence 1111122222223333333322 3456788888875 22345788999999996432 234
Q ss_pred CcCCCCCCCCCCcch-----hHHHHHhhcCCCceEEEecCCceEecCCCCC
Q 028258 157 FKEDSSRLPFPNFYY-----ELEDVSASYSPAITYSVHRSSVIIGASPRSL 202 (211)
Q Consensus 157 ~~e~~~~~~~~~~~~-----~~e~~l~~~~~~~~~~i~Rp~~i~G~~~~~~ 202 (211)
++|+.+... ..|. ..|..........+.+++|.+.|+|.+.+..
T Consensus 142 Y~e~~~~qg--fd~~srL~l~WE~aA~~~~~~~r~~~iR~GvVlG~gGGa~ 190 (315)
T KOG3019|consen 142 YSEKIVHQG--FDILSRLCLEWEGAALKANKDVRVALIRIGVVLGKGGGAL 190 (315)
T ss_pred cccccccCC--hHHHHHHHHHHHHHhhccCcceeEEEEEEeEEEecCCcch
Confidence 667665321 1111 2222222135668999999999999986654
No 312
>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase. Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo
Probab=98.04 E-value=1.5e-05 Score=62.33 Aligned_cols=74 Identities=16% Similarity=0.049 Sum_probs=55.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----C-CCCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----F-PTALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
..++++|+||+|.+|+.+++.|. ..|++|++++|+..+.. . ...+.+ ...+|..+.+++.+.+++
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~-----~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~-~~~~~~~~~~~~~~~~~~--- 97 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLA-----REGARVVLVGRDLERAQKAADSLRARFGEG-VGAVETSDDAARAAAIKG--- 97 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHH-----HCCCEEEEEcCCHHHHHHHHHHHHhhcCCc-EEEeeCCCHHHHHHHHhc---
Confidence 45789999999999999999999 57889999999765321 0 112456 667899998888888876
Q ss_pred ccceEEeecc
Q 028258 82 EITNLFWVPL 91 (211)
Q Consensus 82 ~~~~v~~~a~ 91 (211)
.|.||++..
T Consensus 98 -~diVi~at~ 106 (194)
T cd01078 98 -ADVVFAAGA 106 (194)
T ss_pred -CCEEEECCC
Confidence 466766543
No 313
>PRK14982 acyl-ACP reductase; Provisional
Probab=97.85 E-value=1.4e-05 Score=67.75 Aligned_cols=73 Identities=16% Similarity=0.103 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+|+|+||||+|+||+.++++|.+ ..+ .+++.+.|+..+... -..+ +...|+. .+.+.+.+ +|.|
T Consensus 154 ~~k~VLVtGAtG~IGs~lar~L~~----~~gv~~lilv~R~~~rl~~--La~e-l~~~~i~---~l~~~l~~----aDiV 219 (340)
T PRK14982 154 SKATVAVVGATGDIGSAVCRWLDA----KTGVAELLLVARQQERLQE--LQAE-LGGGKIL---SLEEALPE----ADIV 219 (340)
T ss_pred CCCEEEEEccChHHHHHHHHHHHh----hCCCCEEEEEcCCHHHHHH--HHHH-hccccHH---hHHHHHcc----CCEE
Confidence 468999999999999999999983 234 578888887543210 0112 2223433 34455554 6889
Q ss_pred EeecccCC
Q 028258 87 FWVPLQVQ 94 (211)
Q Consensus 87 ~~~a~~~~ 94 (211)
+|+++...
T Consensus 220 v~~ts~~~ 227 (340)
T PRK14982 220 VWVASMPK 227 (340)
T ss_pred EECCcCCc
Confidence 99987644
No 314
>TIGR02114 coaB_strep phosphopantothenate--cysteine ligase, streptococcal. In most bacteria, a single bifunctional protein catalyses phosphopantothenoylcysteine decarboxylase and phosphopantothenate--cysteine ligase activities, sequential steps in coenzyme A biosynthesis (see TIGR00521). These activities reside in separate proteins encoded by tandem genes in some bacterial lineages. This model describes proteins from the genera Streptococcus and Enterococcus homologous to the C-terminal region of TIGR00521, corresponding to phosphopantothenate--cysteine ligase activity.
Probab=97.72 E-value=7.9e-05 Score=59.85 Aligned_cols=67 Identities=15% Similarity=0.016 Sum_probs=46.9
Q ss_pred CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc---cccceEEeecccC
Q 028258 17 VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS---QEITNLFWVPLQV 93 (211)
Q Consensus 17 atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~---~~~~~v~~~a~~~ 93 (211)
+||+||++++++|+ ++|++|++++|..... + .. ...+|+.+.+.+.+.++.+. ..+|++||+|+..
T Consensus 23 SSGgIG~AIA~~la-----~~Ga~Vvlv~~~~~l~----~-~~-~~~~Dv~d~~s~~~l~~~v~~~~g~iDiLVnnAgv~ 91 (227)
T TIGR02114 23 STGHLGKIITETFL-----SAGHEVTLVTTKRALK----P-EP-HPNLSIREIETTKDLLITLKELVQEHDILIHSMAVS 91 (227)
T ss_pred cccHHHHHHHHHHH-----HCCCEEEEEcChhhcc----c-cc-CCcceeecHHHHHHHHHHHHHHcCCCCEEEECCEec
Confidence 58999999999999 7999999887632211 1 11 23578888877666554331 1389999999864
Q ss_pred C
Q 028258 94 Q 94 (211)
Q Consensus 94 ~ 94 (211)
.
T Consensus 92 d 92 (227)
T TIGR02114 92 D 92 (227)
T ss_pred c
Confidence 3
No 315
>TIGR00521 coaBC_dfp phosphopantothenoylcysteine decarboxylase/phosphopantothenate--cysteine ligase, prokaryotic. This model represents a bifunctional enzyme that catalyzes the second and third steps (cysteine ligation, EC 6.3.2.5, and decarboxylation, EC 4.1.1.36) in the biosynthesis of coenzyme A (CoA) from pantothenate in bacteria. In early descriptions of this flavoprotein, a ts mutation in one region of the protein appeared to cause a defect in DNA metaobolism rather than an increased need for the pantothenate precursor beta-alanine. This protein was then called dfp, for DNA/pantothenate metabolism flavoprotein. The authors responsible for detecting phosphopantothenate--cysteine ligase activity suggest renaming this bifunctional protein coaBC for its role in CoA biosynthesis. This enzyme contains the FMN cofactor, but no FAD or pyruvoyl group. The amino-terminal region contains the phosphopantothenoylcysteine decarboxylase activity.
Probab=97.68 E-value=0.00026 Score=61.22 Aligned_cols=78 Identities=14% Similarity=0.032 Sum_probs=56.8
Q ss_pred CCCCeEEEEcC----------------CChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIGV----------------TGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtGa----------------tG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
..+|++||||| ||.+|.+++++|. ..|++|+.+.++..... .. . ...+|+.+.+
T Consensus 183 ~~~~~vlit~g~t~E~iD~VR~itN~SSG~~g~~~a~~~~-----~~Ga~V~~~~g~~~~~~--~~--~-~~~~~v~~~~ 252 (390)
T TIGR00521 183 LEGKRVLITAGPTREPIDPVRFISNLSSGKMGLALAEAAY-----KRGADVTLITGPVSLLT--PP--G-VKSIKVSTAE 252 (390)
T ss_pred cCCceEEEecCCccCCCCceeeecCCCcchHHHHHHHHHH-----HCCCEEEEeCCCCccCC--CC--C-cEEEEeccHH
Confidence 45789999998 4679999999999 79999999887654221 12 2 4468999988
Q ss_pred HH-HHHHHhcccccceEEeecccCC
Q 028258 71 DT-ALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~-~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
++ +..++.....+|.+|++|+...
T Consensus 253 ~~~~~~~~~~~~~~D~~i~~Aavsd 277 (390)
T TIGR00521 253 EMLEAALNELAKDFDIFISAAAVAD 277 (390)
T ss_pred HHHHHHHHhhcccCCEEEEcccccc
Confidence 77 5555333223799999998753
No 316
>PRK12548 shikimate 5-dehydrogenase; Provisional
Probab=97.61 E-value=0.00018 Score=59.81 Aligned_cols=74 Identities=11% Similarity=-0.034 Sum_probs=53.2
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCC---CCCC-----C--CCCCceeEEEeeCCCHHHHHHH
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP---PPGW-----F--PTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~---~~~~-----~--~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
.++|+++|+|| |++|++++..|. ..|++ |++++|+. .+.. + ....+. ...+|+.+.+++.+.
T Consensus 124 ~~~k~vlI~GA-GGagrAia~~La-----~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~-~~~~d~~~~~~~~~~ 196 (289)
T PRK12548 124 VKGKKLTVIGA-GGAATAIQVQCA-----LDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECI-VNVYDLNDTEKLKAE 196 (289)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCce-eEEechhhhhHHHhh
Confidence 34689999998 899999999999 67886 99999986 2210 0 113345 567888887777666
Q ss_pred HHhcccccceEEeecc
Q 028258 76 LSLISQEITNLFWVPL 91 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~ 91 (211)
++. .|.||++.-
T Consensus 197 ~~~----~DilINaTp 208 (289)
T PRK12548 197 IAS----SDILVNATL 208 (289)
T ss_pred hcc----CCEEEEeCC
Confidence 654 578888763
No 317
>PLN02968 Probable N-acetyl-gamma-glutamyl-phosphate reductase
Probab=97.61 E-value=0.00021 Score=61.71 Aligned_cols=39 Identities=15% Similarity=0.307 Sum_probs=32.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++++|.|.||||++|+.|++.|.+ ...++|..+.++...
T Consensus 37 ~~~kVaIvGATG~vG~eLlrlL~~----hP~~el~~l~s~~sa 75 (381)
T PLN02968 37 EKKRIFVLGASGYTGAEVRRLLAN----HPDFEITVMTADRKA 75 (381)
T ss_pred cccEEEEECCCChHHHHHHHHHHh----CCCCeEEEEEChhhc
Confidence 567899999999999999999995 457889998876543
No 318
>KOG2733 consensus Uncharacterized membrane protein [Function unknown]
Probab=97.56 E-value=0.00017 Score=60.64 Aligned_cols=78 Identities=10% Similarity=-0.020 Sum_probs=57.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----------FPTALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.-.+.|.|||||.|..+++++++... -++..+-+..|++.+.. ...+..- .+.+|.+|++++.+..+
T Consensus 5 ~yDvVIyGASGfTG~yivee~v~~~~-~~~~slavAGRn~~KL~~vL~~~~~k~~~~ls~~~-i~i~D~~n~~Sl~emak 82 (423)
T KOG2733|consen 5 RYDVVIYGASGFTGKYIVEEAVSSQV-FEGLSLAVAGRNEKKLQEVLEKVGEKTGTDLSSSV-ILIADSANEASLDEMAK 82 (423)
T ss_pred eeeEEEEccccccceeeHHHHhhhhc-ccCceEEEecCCHHHHHHHHHHHhhccCCCcccce-EEEecCCCHHHHHHHHh
Confidence 45799999999999999999983111 25666777778766421 0113444 77899999999999988
Q ss_pred hcccccceEEeeccc
Q 028258 78 LISQEITNLFWVPLQ 92 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~ 92 (211)
+. .+|+||++.
T Consensus 83 ~~----~vivN~vGP 93 (423)
T KOG2733|consen 83 QA----RVIVNCVGP 93 (423)
T ss_pred hh----EEEEecccc
Confidence 74 578888876
No 319
>cd01338 MDH_choloroplast_like Chloroplast-like malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are bacterial MDHs, and plant MDHs localized to the choloroplasts. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.50 E-value=0.0019 Score=54.61 Aligned_cols=95 Identities=11% Similarity=0.014 Sum_probs=62.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCCCCCCCCCCceeEEEeeCCCH-----------H
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPPGWFPTALVDRYITFDALDP-----------T 70 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~-----------~ 70 (211)
.++|.|+||+|.||+.++..|+. .+. ++..++..+.... .+ -...|+.+- .
T Consensus 2 p~KV~IiGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~-----a~-g~a~Dl~~~~~~~~~~~~i~~ 70 (322)
T cd01338 2 PVRVAVTGAAGQIGYSLLFRIAS-----GEMFGPDQPVILQLLELPQALKA-----LE-GVAMELEDCAFPLLAEIVITD 70 (322)
T ss_pred CeEEEEECCCcHHHHHHHHHHHh-----ccccCCCCceEEEEEecCCcccc-----cc-eeehhhhhccccccCceEEec
Confidence 46899999999999999999983 443 6888888543210 00 111111110 0
Q ss_pred HHHHHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
...+.+++ .|+||.+|+... .+..+....|....+.+.+.+.++
T Consensus 71 ~~~~~~~d----aDivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 117 (322)
T cd01338 71 DPNVAFKD----ADWALLVGAKPRGPGMERADLLKANGKIFTAQGKALNDV 117 (322)
T ss_pred CcHHHhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 11233444 578888888744 245567889999999999999987
No 320
>PRK05442 malate dehydrogenase; Provisional
Probab=97.43 E-value=0.0026 Score=53.81 Aligned_cols=100 Identities=12% Similarity=0.048 Sum_probs=61.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH-----------HHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT-----------DTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~-----------~~~~~ 75 (211)
+++|.|+||+|.+|+.++..|+..+-- ..-.++..+++++.... .+ -...|+.|.. ...+.
T Consensus 4 ~~KV~IiGaaG~VG~~~a~~l~~~~~~~~~~~~el~LiDi~~~~~~-----~~-g~a~Dl~~~~~~~~~~~~i~~~~y~~ 77 (326)
T PRK05442 4 PVRVAVTGAAGQIGYSLLFRIASGDMLGKDQPVILQLLEIPPALKA-----LE-GVVMELDDCAFPLLAGVVITDDPNVA 77 (326)
T ss_pred CcEEEEECCCcHHHHHHHHHHHhhhhcCCCCccEEEEEecCCcccc-----cc-eeehhhhhhhhhhcCCcEEecChHHH
Confidence 457999999999999999988731000 01126888887543210 01 1111222111 11233
Q ss_pred HHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 76 LSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 76 ~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+++ .|.|+.+|+... .+..+....|....+.+.+.+.++
T Consensus 78 ~~d----aDiVVitaG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 119 (326)
T PRK05442 78 FKD----ADVALLVGARPRGPGMERKDLLEANGAIFTAQGKALNEV 119 (326)
T ss_pred hCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHHh
Confidence 444 577888888643 255667889999999999999886
No 321
>TIGR01759 MalateDH-SF1 malate dehydrogenase. This model represents a family of malate dehydrogenases in bacteria and eukaryotes which utilize either NAD or NADP depending on the species and context. MDH interconverts malate and oxaloacetate and is a part of the citric acid cycle as well as the C4 cycle in certain photosynthetic organisms.
Probab=97.34 E-value=0.0021 Score=54.32 Aligned_cols=97 Identities=14% Similarity=0.045 Sum_probs=61.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-------EEEEEeCCCCC--CC-----CCCCCceeEEE-eeCCCHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-------KVYGAARRPPP--GW-----FPTALVDRYIT-FDALDPTDTAL 74 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-------~V~~~~R~~~~--~~-----~~~~~~~~~i~-~Dl~d~~~~~~ 74 (211)
-+|.|+||+|.+|++++..|+. .+. ++..+++.+.. .. +.+.... ... ..+. ....+
T Consensus 4 ~KV~IIGa~G~VG~~~a~~l~~-----~~~~~~~~~~el~L~Di~~~~~~a~g~a~Dl~~~~~~-~~~~~~i~--~~~~~ 75 (323)
T TIGR01759 4 VRVAVTGAAGQIGYSLLFRIAS-----GELFGKDQPVVLHLLDIPPAMKALEGVAMELEDCAFP-LLAGVVAT--TDPEE 75 (323)
T ss_pred eEEEEECCCcHHHHHHHHHHHh-----CCcccCCCccEEEEEecCCcccccchHHHHHhhcccc-ccCCcEEe--cChHH
Confidence 4799999999999999999983 442 78888885422 11 0111000 000 0011 11123
Q ss_pred HHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 75 KLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 75 ~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.+++ .|+|+.+|+... .+..+....|....+.+.+.+.+.
T Consensus 76 ~~~d----aDvVVitAG~~~k~g~tR~dll~~Na~i~~~i~~~i~~~ 118 (323)
T TIGR01759 76 AFKD----VDAALLVGAFPRKPGMERADLLSKNGKIFKEQGKALNKV 118 (323)
T ss_pred HhCC----CCEEEEeCCCCCCCCCcHHHHHHHHHHHHHHHHHHHHhh
Confidence 3444 578888988753 355667889999999999999987
No 322
>cd05294 LDH-like_MDH_nadp A lactate dehydrogenases-like structure with malate dehydrogenase enzymatic activity. The LDH-like MDH proteins have a lactate dehyhydrogenase-like (LDH-like) structure and malate dehydrogenase (MDH) enzymatic activity. This subgroup is composed of some archaeal LDH-like MDHs that prefer NADP(H) rather than NAD(H) as a cofactor. One member, MJ0490 from Methanococcus jannaschii, has been observed to form dimers and tetramers during crystalization, although it is believed to exist primarilly as a tetramer in solution. In addition to its MDH activity, MJ0490 also possesses fructose-1,6-bisphosphate-activated LDH activity. Members of this subgroup have a higher sequence similarity to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carbox
Probab=97.33 E-value=0.0018 Score=54.47 Aligned_cols=95 Identities=16% Similarity=0.035 Sum_probs=60.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCC--CCCC-----CCCC----CceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRP--PPGW-----FPTA----LVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~--~~~~-----~~~~----~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|.|+||||.+|..++..|+ ..|. +|++++|.+ ++.. ..+. ... .....++ +.+ .+
T Consensus 1 ~kI~IiGatG~vG~~~a~~l~-----~~g~~~~v~lvd~~~~~~~l~~~~~dl~d~~~~~~~~--~~i~~~~--d~~-~l 70 (309)
T cd05294 1 MKVSIIGASGRVGSATALLLA-----KEDVVKEINLISRPKSLEKLKGLRLDIYDALAAAGID--AEIKISS--DLS-DV 70 (309)
T ss_pred CEEEEECCCChHHHHHHHHHH-----hCCCCCEEEEEECcccccccccccchhhhchhccCCC--cEEEECC--CHH-Hh
Confidence 468999999999999999999 4554 499999954 2210 0010 001 0111111 122 25
Q ss_pred HhcccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.||.+++.+.. +..+..+.|...++.+++.+.+.
T Consensus 71 ~~----aDiViitag~p~~~~~~r~dl~~~n~~i~~~~~~~i~~~ 111 (309)
T cd05294 71 AG----SDIVIITAGVPRKEGMSRLDLAKKNAKIVKKYAKQIAEF 111 (309)
T ss_pred CC----CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 54 5788888876442 33556788999999999988887
No 323
>COG0623 FabI Enoyl-[acyl-carrier-protein]
Probab=97.33 E-value=0.0056 Score=48.86 Aligned_cols=107 Identities=8% Similarity=-0.051 Sum_probs=71.5
Q ss_pred CCCCeEEEEc--CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC---C-CC--CCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 7 NPKSVALIIG--VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP---G-WF--PTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 7 ~~~~~ilVtG--atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~---~-~~--~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|++||+| -..-|+..|++.|. ++|.++...-..+.- . ++ .....- +++||+++.+++...++.
T Consensus 4 L~GK~~lI~Gvan~rSIAwGIAk~l~-----~~GAeL~fTy~~e~l~krv~~la~~~~s~~-v~~cDV~~d~~i~~~f~~ 77 (259)
T COG0623 4 LEGKRILIMGVANNRSIAWGIAKALA-----EQGAELAFTYQGERLEKRVEELAEELGSDL-VLPCDVTNDESIDALFAT 77 (259)
T ss_pred cCCceEEEEEecccccHHHHHHHHHH-----HcCCEEEEEeccHHHHHHHHHHHhhccCCe-EEecCCCCHHHHHHHHHH
Confidence 4579999999 45679999999999 799987765543321 0 00 112334 689999999999888877
Q ss_pred ccc---ccceEEeecccCCch-------------hHHHHhhcHHHHHHHHHHHHhcC
Q 028258 79 ISQ---EITNLFWVPLQVQES-------------EEVNIFKNSTMLKNVLSVLVSSN 119 (211)
Q Consensus 79 ~~~---~~~~v~~~a~~~~~~-------------~~~~~~~n~~~~~~l~~~~~~~~ 119 (211)
+.. .+|.++|+.+....+ ....+++...++..+.++++..|
T Consensus 78 i~~~~g~lD~lVHsIaFa~k~el~G~~~dtsre~f~~a~~IS~YS~~~lak~a~~lM 134 (259)
T COG0623 78 IKKKWGKLDGLVHSIAFAPKEELKGDYLDTSREGFLIAMDISAYSFTALAKAARPLM 134 (259)
T ss_pred HHHhhCcccEEEEEeccCChHHhCCcccccCHHHHHhHhhhhHhhHHHHHHHHHHhc
Confidence 654 388999998764421 11223444555556666666654
No 324
>PRK00066 ldh L-lactate dehydrogenase; Reviewed
Probab=97.20 E-value=0.0012 Score=55.63 Aligned_cols=92 Identities=15% Similarity=0.047 Sum_probs=62.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+++|.|+|| |.+|++++..|+ ..+. ++..++++..... +.+ ..+. . .. .+. +.+
T Consensus 6 ~~ki~iiGa-G~vG~~~a~~l~-----~~~~~~el~L~D~~~~~~~g~~~Dl~~~~~~~~~~~-i-~~--~~~----~~~ 71 (315)
T PRK00066 6 HNKVVLVGD-GAVGSSYAYALV-----NQGIADELVIIDINKEKAEGDAMDLSHAVPFTSPTK-I-YA--GDY----SDC 71 (315)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCCchhHHHHHHHHhhccccCCeE-E-Ee--CCH----HHh
Confidence 568999998 999999999998 4555 6889998765421 111 1222 2 21 222 224
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.|+.+++.+. .+..+....|....+.+++.+.+.
T Consensus 72 ~~----adivIitag~~~k~g~~R~dll~~N~~i~~~i~~~i~~~ 112 (315)
T PRK00066 72 KD----ADLVVITAGAPQKPGETRLDLVEKNLKIFKSIVGEVMAS 112 (315)
T ss_pred CC----CCEEEEecCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 578888888743 245567788999999999988887
No 325
>PF00056 Ldh_1_N: lactate/malate dehydrogenase, NAD binding domain Prosite entry for lactate dehydrogenase Prosite entry for malate dehydrogenase; InterPro: IPR001236 L-lactate dehydrogenases are metabolic enzymes which catalyse the conversion of L-lactate to pyruvate, the last step in anaerobic glycolysis []. L-lactate dehydrogenase is also found as a lens crystallin in bird and crocodile eyes. L-2-hydroxyisocaproate dehydrogenases are also members of the family. Malate dehydrogenases catalyse the interconversion of malate to oxaloacetate []. The enzyme participates in the citric acid cycle. This entry represents the N-terminal, and is thought to be a Rossmann NAD-binding fold.; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1IB6_B 3HHP_C 1IE3_A 2PWZ_A 1EMD_A 2CMD_A 1EZ4_D 9LDT_B 9LDB_B 2D4A_C ....
Probab=97.19 E-value=0.0016 Score=48.30 Aligned_cols=95 Identities=17% Similarity=0.028 Sum_probs=63.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CC----CCCceeEEEeeCCCHHHHHHHHHhccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FP----TALVDRYITFDALDPTDTALKLSLISQ 81 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~----~~~~~~~i~~Dl~d~~~~~~~~~~~~~ 81 (211)
+|.|+||+|.+|++++..|+.. .-..++..+++++.... +. .......+.. .+.++ +++
T Consensus 2 KV~IiGa~G~VG~~~a~~l~~~---~l~~ei~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~i~~--~~~~~----~~~--- 69 (141)
T PF00056_consen 2 KVAIIGAAGNVGSTLALLLAQQ---GLADEIVLIDINEDKAEGEALDLSHASAPLPSPVRITS--GDYEA----LKD--- 69 (141)
T ss_dssp EEEEESTTSHHHHHHHHHHHHT---TTSSEEEEEESSHHHHHHHHHHHHHHHHGSTEEEEEEE--SSGGG----GTT---
T ss_pred EEEEECCCChHHHHHHHHHHhC---CCCCceEEeccCcccceeeehhhhhhhhhccccccccc--ccccc----ccc---
Confidence 6899999999999999999841 33467999998854310 00 0111101122 22222 343
Q ss_pred ccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 82 EITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 82 ~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 70 -aDivvitag~~~~~g~sR~~ll~~N~~i~~~~~~~i~~~ 108 (141)
T PF00056_consen 70 -ADIVVITAGVPRKPGMSRLDLLEANAKIVKEIAKKIAKY 108 (141)
T ss_dssp -ESEEEETTSTSSSTTSSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -ccEEEEeccccccccccHHHHHHHhHhHHHHHHHHHHHh
Confidence 578888887753 245567788999999999999988
No 326
>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=97.19 E-value=0.001 Score=58.56 Aligned_cols=72 Identities=18% Similarity=0.079 Sum_probs=51.4
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC------CCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW------FPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~------~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
+++|+++|+|+++ +|..+++.|+ +.|++|++++++..... ....+++ ++.+|..+. .+.+
T Consensus 3 ~~~k~v~iiG~g~-~G~~~A~~l~-----~~G~~V~~~d~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~-----~~~~-- 68 (450)
T PRK14106 3 LKGKKVLVVGAGV-SGLALAKFLK-----KLGAKVILTDEKEEDQLKEALEELGELGIE-LVLGEYPEE-----FLEG-- 68 (450)
T ss_pred cCCCEEEEECCCH-HHHHHHHHHH-----HCCCEEEEEeCCchHHHHHHHHHHHhcCCE-EEeCCcchh-----Hhhc--
Confidence 3468999999877 9999999999 79999999998753211 1123567 777787751 1222
Q ss_pred cccceEEeecccCC
Q 028258 81 QEITNLFWVPLQVQ 94 (211)
Q Consensus 81 ~~~~~v~~~a~~~~ 94 (211)
+|.||++++...
T Consensus 69 --~d~vv~~~g~~~ 80 (450)
T PRK14106 69 --VDLVVVSPGVPL 80 (450)
T ss_pred --CCEEEECCCCCC
Confidence 688888877543
No 327
>PRK14874 aspartate-semialdehyde dehydrogenase; Provisional
Probab=97.15 E-value=0.0018 Score=55.06 Aligned_cols=35 Identities=20% Similarity=0.258 Sum_probs=28.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc---EEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW---KVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~---~V~~~~R~~~ 49 (211)
++|+|.||||++|+.|++.|. +++| ++..+.|+..
T Consensus 2 ~~V~IvGAtG~vG~~l~~lL~-----~~~hp~~~l~~l~s~~~ 39 (334)
T PRK14874 2 YNVAVVGATGAVGREMLNILE-----ERNFPVDKLRLLASARS 39 (334)
T ss_pred CEEEEECCCCHHHHHHHHHHH-----hCCCCcceEEEEEcccc
Confidence 479999999999999999998 4554 4577777644
No 328
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=97.08 E-value=0.0009 Score=48.24 Aligned_cols=34 Identities=21% Similarity=0.329 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~ 48 (211)
+|.|+||||++|+.|++.|.+ ...+++.. +.|+.
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~----hp~~e~~~~~~~~~ 35 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAE----HPDFELVALVSSSR 35 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHH----TSTEEEEEEEESTT
T ss_pred CEEEECCCCHHHHHHHHHHhc----CCCccEEEeeeecc
Confidence 589999999999999999996 56788555 45554
No 329
>cd01337 MDH_glyoxysomal_mitochondrial Glyoxysomal and mitochondrial malate dehydrogenases. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subfamily are localized to the glycosome and mitochondria. MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=97.07 E-value=0.0084 Score=50.40 Aligned_cols=96 Identities=11% Similarity=0.060 Sum_probs=62.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCCC--CceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPTA--LVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+|.|+||+|.+|++++..|+ ..+ .++..++.+..... +.+. ... ..... .+ +++.+.+++ .
T Consensus 2 KI~IIGaaG~VG~~~a~~l~-----~~~~~~elvLiDi~~a~g~alDL~~~~~~~~-i~~~~-~~-~~~y~~~~d----a 69 (310)
T cd01337 2 KVAVLGAAGGIGQPLSLLLK-----LNPLVSELALYDIVNTPGVAADLSHINTPAK-VTGYL-GP-EELKKALKG----A 69 (310)
T ss_pred EEEEECCCCHHHHHHHHHHH-----hCCCCcEEEEEecCccceeehHhHhCCCcce-EEEec-CC-CchHHhcCC----C
Confidence 68999999999999999998 344 46888887621111 1111 111 11110 11 112334554 5
Q ss_pred ceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|.|+.+|+... .+..+....|...++.+.+.+.++
T Consensus 70 DivvitaG~~~k~g~tR~dll~~N~~i~~~i~~~i~~~ 107 (310)
T cd01337 70 DVVVIPAGVPRKPGMTRDDLFNINAGIVRDLATAVAKA 107 (310)
T ss_pred CEEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 78888888753 245667889999999999999887
No 330
>TIGR01772 MDH_euk_gproteo malate dehydrogenase, NAD-dependent. Although malate dehydrogenases have in some cases been mistaken for lactate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of lactate dehydrogenases.
Probab=97.07 E-value=0.0078 Score=50.64 Aligned_cols=96 Identities=14% Similarity=0.084 Sum_probs=61.7
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC---CCCC--CceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW---FPTA--LVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~---~~~~--~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
+|.|+||+|.||++++..|+. .+ -++.++++++.... +.+. ... ..... +.++..+.+++ .
T Consensus 1 KV~IiGaaG~VG~~~a~~l~~-----~~~~~elvL~Di~~a~g~a~DL~~~~~~~~-i~~~~--~~~~~~~~~~d----a 68 (312)
T TIGR01772 1 KVAVLGAAGGIGQPLSLLLKL-----QPYVSELSLYDIAGAAGVAADLSHIPTAAS-VKGFS--GEEGLENALKG----A 68 (312)
T ss_pred CEEEECCCCHHHHHHHHHHHh-----CCCCcEEEEecCCCCcEEEchhhcCCcCce-EEEec--CCCchHHHcCC----C
Confidence 578999999999999999983 44 36888888662211 1111 111 11101 11112334555 5
Q ss_pred ceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 84 TNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 84 ~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
|+|+.+++... .+..+....|...++.+.+.+.+.
T Consensus 69 DivvitaG~~~~~g~~R~dll~~N~~I~~~i~~~i~~~ 106 (312)
T TIGR01772 69 DVVVIPAGVPRKPGMTRDDLFNVNAGIVKDLVAAVAES 106 (312)
T ss_pred CEEEEeCCCCCCCCccHHHHHHHhHHHHHHHHHHHHHh
Confidence 78888888743 245567788999999999999887
No 331
>PRK00436 argC N-acetyl-gamma-glutamyl-phosphate reductase; Validated
Probab=97.05 E-value=0.0013 Score=55.98 Aligned_cols=34 Identities=24% Similarity=0.294 Sum_probs=28.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
++|+|+||||++|+.+++.|.+ ..+++++++.++
T Consensus 3 ~kVaIiGAtG~vG~~l~~~L~~----~p~~elv~v~~~ 36 (343)
T PRK00436 3 IKVGIVGASGYTGGELLRLLLN----HPEVEIVAVTSR 36 (343)
T ss_pred eEEEEECCCCHHHHHHHHHHHc----CCCceEEEEECc
Confidence 6899999999999999999995 567888776664
No 332
>PRK08664 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=97.03 E-value=0.0012 Score=56.50 Aligned_cols=38 Identities=26% Similarity=0.266 Sum_probs=30.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
||+.+|+|+||||++|+.+++.|.+ ....++.++.++.
T Consensus 1 ~~~~~V~I~GatG~iG~~l~~~L~~----~p~~el~~~~~s~ 38 (349)
T PRK08664 1 MMKLKVGILGATGMVGQRFVQLLAN----HPWFEVTALAASE 38 (349)
T ss_pred CCCcEEEEECCCCHHHHHHHHHHHc----CCCceEEEEEcCh
Confidence 3457899999999999999999984 4556888874543
No 333
>cd05291 HicDH_like L-2-hydroxyisocapronate dehydrogenases and some bacterial L-lactate dehydrogenases. L-2-hydroxyisocapronate dehydrogenase (HicDH) catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. This subfamily is composed of HicDHs and some bacterial L-lactate dehydrogenases (LDH). LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Bacterial LDHs can be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. Members of this subfamily with known structures such as the HicDH of Lactobacillus confusus, the non-allosteric LDH of Lactobacillus pentosus, and the allosteric LDH of Bacillus stearothermophilus, show that they exist as homotetramers. The HicDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine
Probab=97.01 E-value=0.0071 Score=50.72 Aligned_cols=91 Identities=19% Similarity=0.074 Sum_probs=62.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCCCC-----------CCCceeEEEeeCCCHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGWFP-----------TALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~~~-----------~~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
++|.|+|+ |.+|+.++..|+ ..| ++|.+++|++...... ..... . . ..+.+ .+
T Consensus 1 ~kI~IIGa-G~vG~~~a~~l~-----~~g~~~ei~l~D~~~~~~~~~a~dL~~~~~~~~~~~~-i-~--~~~~~----~l 66 (306)
T cd05291 1 RKVVIIGA-GHVGSSFAYSLV-----NQGIADELVLIDINEEKAEGEALDLEDALAFLPSPVK-I-K--AGDYS----DC 66 (306)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCcchhhHhHhhHHHHhhccCCCeE-E-E--cCCHH----Hh
Confidence 36899995 999999999998 566 6899999977642100 01111 1 1 12222 23
Q ss_pred HhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.||++++... .+..+....|....+.+.+.+.++
T Consensus 67 ~~----aDIVIitag~~~~~g~~R~dll~~N~~i~~~~~~~i~~~ 107 (306)
T cd05291 67 KD----ADIVVITAGAPQKPGETRLDLLEKNAKIMKSIVPKIKAS 107 (306)
T ss_pred CC----CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 33 688888888743 245567788999999999999987
No 334
>COG3268 Uncharacterized conserved protein [Function unknown]
Probab=96.99 E-value=0.00059 Score=57.05 Aligned_cols=78 Identities=17% Similarity=-0.021 Sum_probs=55.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC----CCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW----FPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~----~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.+-+...++|-|||||.|.-++++|+ .+|.+-....|+..+.. ...++.. ..++.+++.+++.+.+
T Consensus 1 ~~~e~e~d~iiYGAtGy~G~lvae~l~-----~~g~~~aLAgRs~~kl~~l~~~LG~~~~---~~p~~~p~~~~~~~~~- 71 (382)
T COG3268 1 MPMEREYDIIIYGATGYAGGLVAEYLA-----REGLTAALAGRSSAKLDALRASLGPEAA---VFPLGVPAALEAMASR- 71 (382)
T ss_pred CCCCcceeEEEEccccchhHHHHHHHH-----HcCCchhhccCCHHHHHHHHHhcCcccc---ccCCCCHHHHHHHHhc-
Confidence 344456789999999999999999999 57766655667766531 1134444 4555558888888777
Q ss_pred ccccceEEeecccC
Q 028258 80 SQEITNLFWVPLQV 93 (211)
Q Consensus 80 ~~~~~~v~~~a~~~ 93 (211)
..+|++|++.-
T Consensus 72 ---~~VVlncvGPy 82 (382)
T COG3268 72 ---TQVVLNCVGPY 82 (382)
T ss_pred ---ceEEEeccccc
Confidence 56899999873
No 335
>PF04127 DFP: DNA / pantothenate metabolism flavoprotein; InterPro: IPR007085 This entry represents the C-terminal domain found in DNA/pantothenate metabolism flavoproteins, which affects synthesis of DNA and pantothenate metabolism. These proteins contain ATP, phosphopantothenate, and cysteine binding sites. The structure of this domain has been determined in human phosphopantothenoylcysteine (PPC) synthetase [] and as the PPC synthase domain (CoaB) from the Escherichia coli coenzyme A bifunctional protein CoaBC []. This domain adopts a 3-layer alpha/beta/alpha fold with mixed beta-sheets, which topologically resembles a combination of Rossmann-like and ribokinase-like folds. The structure of these proteins predicts a ping pong mechanism with initial formation of an acyladenylate intermediate, followed by release of pyrophosphate and attack by cysteine to form the final products PPC and AMP. ; PDB: 1U7W_A 1U7U_A 1U80_C 1U7Z_A 1P9O_B 2GK4_A.
Probab=96.98 E-value=0.0063 Score=47.32 Aligned_cols=78 Identities=14% Similarity=0.009 Sum_probs=46.2
Q ss_pred CCCeEEEEc----------------CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHH
Q 028258 8 PKSVALIIG----------------VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTD 71 (211)
Q Consensus 8 ~~~~ilVtG----------------atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~ 71 (211)
.+|+||||+ .||..|.+|++++. ..|++|+.+..... .. ...+++ .+ ++...++
T Consensus 2 ~gk~vlITaG~T~E~iD~VR~ItN~SSG~~G~~lA~~~~-----~~Ga~V~li~g~~~-~~-~p~~~~-~i--~v~sa~e 71 (185)
T PF04127_consen 2 KGKKVLITAGPTREPIDPVRFITNRSSGKMGAALAEEAA-----RRGAEVTLIHGPSS-LP-PPPGVK-VI--RVESAEE 71 (185)
T ss_dssp TT-EEEEEESB-EEESSSSEEEEES--SHHHHHHHHHHH-----HTT-EEEEEE-TTS------TTEE-EE--E-SSHHH
T ss_pred CCCEEEEECCCccccCCCceEecCCCcCHHHHHHHHHHH-----HCCCEEEEEecCcc-cc-ccccce-EE--Eecchhh
Confidence 368889987 48999999999999 79999999887632 11 124556 44 4555555
Q ss_pred HHHHHHhcccccceEEeecccCCc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE 95 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~ 95 (211)
+.+++...-...|.+|++|+....
T Consensus 72 m~~~~~~~~~~~Di~I~aAAVsDf 95 (185)
T PF04127_consen 72 MLEAVKELLPSADIIIMAAAVSDF 95 (185)
T ss_dssp HHHHHHHHGGGGSEEEE-SB--SE
T ss_pred hhhhhccccCcceeEEEecchhhe
Confidence 555544332226899999987653
No 336
>PRK08057 cobalt-precorrin-6x reductase; Reviewed
Probab=96.91 E-value=0.027 Score=45.84 Aligned_cols=73 Identities=15% Similarity=-0.043 Sum_probs=54.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+++|||+|||+ =|+.|++.|. +.|+.|+...-..... .....+. ...+-+.|.+++.+.+++.+ ++.|+.
T Consensus 2 ~~~IlvlgGT~-egr~la~~L~-----~~g~~v~~Svat~~g~-~~~~~~~-v~~G~l~~~~~l~~~l~~~~--i~~VID 71 (248)
T PRK08057 2 MPRILLLGGTS-EARALARALA-----AAGVDIVLSLAGRTGG-PADLPGP-VRVGGFGGAEGLAAYLREEG--IDLVID 71 (248)
T ss_pred CceEEEEechH-HHHHHHHHHH-----hCCCeEEEEEccCCCC-cccCCce-EEECCCCCHHHHHHHHHHCC--CCEEEE
Confidence 46799999987 4999999998 6789988765544322 2345667 77888888899999998765 777776
Q ss_pred ecc
Q 028258 89 VPL 91 (211)
Q Consensus 89 ~a~ 91 (211)
.+.
T Consensus 72 ATH 74 (248)
T PRK08057 72 ATH 74 (248)
T ss_pred CCC
Confidence 543
No 337
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=96.84 E-value=0.0015 Score=57.36 Aligned_cols=69 Identities=20% Similarity=0.116 Sum_probs=51.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CC-CCCceeEEEeeCCCHHHHHHH-HHhcccccceEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FP-TALVDRYITFDALDPTDTALK-LSLISQEITNLF 87 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~-~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~v~ 87 (211)
+++|+|+ |.+|+++++.|. +.|++|++++|++.... .. ..+++ ++.+|.++.+.+.++ +++ ++.++
T Consensus 2 ~viIiG~-G~ig~~~a~~L~-----~~g~~v~vid~~~~~~~~~~~~~~~~-~~~gd~~~~~~l~~~~~~~----a~~vi 70 (453)
T PRK09496 2 KIIIVGA-GQVGYTLAENLS-----GENNDVTVIDTDEERLRRLQDRLDVR-TVVGNGSSPDVLREAGAED----ADLLI 70 (453)
T ss_pred EEEEECC-CHHHHHHHHHHH-----hCCCcEEEEECCHHHHHHHHhhcCEE-EEEeCCCCHHHHHHcCCCc----CCEEE
Confidence 6899996 999999999999 68999999999776421 11 24678 899999998776665 333 45555
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 71 ~~~ 73 (453)
T PRK09496 71 AVT 73 (453)
T ss_pred Eec
Confidence 443
No 338
>PRK05671 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=96.83 E-value=0.0038 Score=53.06 Aligned_cols=21 Identities=29% Similarity=0.453 Sum_probs=20.1
Q ss_pred CeEEEEcCCChHHHHHHHHhh
Q 028258 10 SVALIIGVTGISGLSLAEALK 30 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~ 30 (211)
.+|+|+||||++|+.+++.|.
T Consensus 5 ~~IaIvGATG~vG~eLlrlL~ 25 (336)
T PRK05671 5 LDIAVVGATGTVGEALVQILE 25 (336)
T ss_pred CEEEEEccCCHHHHHHHHHHh
Confidence 679999999999999999999
No 339
>COG0039 Mdh Malate/lactate dehydrogenases [Energy production and conversion]
Probab=96.81 E-value=0.012 Score=49.40 Aligned_cols=95 Identities=19% Similarity=0.033 Sum_probs=61.7
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCCC-----CceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPTA-----LVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~~-----~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.|+|| |+||+.++..|+.. .-+-++..++....... +.+. .-. .+.+| .+ .+.+++
T Consensus 1 ~KVaviGa-G~VG~s~a~~l~~~---~~~~el~LiDi~~~~~~G~a~DL~~~~~~~~~~~-~i~~~-~~----y~~~~~- 69 (313)
T COG0039 1 MKVAVIGA-GNVGSSLAFLLLLQ---GLGSELVLIDINEEKAEGVALDLSHAAAPLGSDV-KITGD-GD----YEDLKG- 69 (313)
T ss_pred CeEEEECC-ChHHHHHHHHHhcc---cccceEEEEEcccccccchhcchhhcchhccCce-EEecC-CC----hhhhcC-
Confidence 46899999 99999999999731 22346888888744321 1110 001 12222 11 122444
Q ss_pred ccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+|+.+.. +..+....|...++.+.+.+.+.
T Consensus 70 ---aDiVvitAG~prKpGmtR~DLl~~Na~I~~~i~~~i~~~ 108 (313)
T COG0039 70 ---ADIVVITAGVPRKPGMTRLDLLEKNAKIVKDIAKAIAKY 108 (313)
T ss_pred ---CCEEEEeCCCCCCCCCCHHHHHHhhHHHHHHHHHHHHhh
Confidence 5788888877542 55678899999999999999887
No 340
>TIGR01296 asd_B aspartate-semialdehyde dehydrogenase (peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. This model represents a branch more closely related to the USG-1 protein than to the other aspartate-semialdehyde dehydrogenases represented in model TIGR00978.
Probab=96.72 E-value=0.0042 Score=52.86 Aligned_cols=34 Identities=21% Similarity=0.287 Sum_probs=25.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEE---EEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKV---YGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V---~~~~R~~~ 49 (211)
+|+|.||||++|+.|++.|. +++|.+ ..+.++..
T Consensus 1 ~VaIvGAtG~vG~eLi~lL~-----~~~hp~~~l~~~as~~~ 37 (339)
T TIGR01296 1 NVAIVGATGAVGQEMLKILE-----ERNFPIDKLVLLASDRS 37 (339)
T ss_pred CEEEEcCCCHHHHHHHHHHH-----hCCCChhhEEEEecccc
Confidence 47999999999999999998 556663 34445543
No 341
>PF01113 DapB_N: Dihydrodipicolinate reductase, N-terminus; InterPro: IPR000846 Dihydrodipicolinate reductase catalyzes the second step in the biosynthesis of diaminopimelic acid and lysine, the NAD or NADP-dependent reduction of 2,3-dihydrodipicolinate into 2,3,4,5-tetrahydrodipicolinate [, , ]. In Escherichia coli and Mycobacterium tuberculosis, dihydrodipicolinate reductase has equal specificity for NADH and NADPH, however in Thermotoga maritima there it has a greater affinity for NADPH []. In addition, the enzyme is inhibited by high concentrations of its substrate, which consequently acts as a feedback control on the lysine biosynthesis pathway. In T. maritima, the enzyme also lacks N-terminal and C-terminal loops which are present in enzyme of the former two organisms. This entry represents the N-terminal domain of dihydrodipicolinate reductase which binds the dinucleotide NAD(P)H.; GO: 0008839 dihydrodipicolinate reductase activity, 0009089 lysine biosynthetic process via diaminopimelate, 0055114 oxidation-reduction process; PDB: 3QY9_D 1VM6_C 1ARZ_A 1DIH_A 1DRW_A 1DRV_A 1DRU_A 2DAP_A 1DAP_B 3DAP_A ....
Probab=96.71 E-value=0.011 Score=42.88 Aligned_cols=34 Identities=26% Similarity=0.492 Sum_probs=28.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~ 48 (211)
+|.|.|++|.+|+.+++.+.+ ..++++. +++|++
T Consensus 2 rV~i~G~~GrMG~~i~~~i~~----~~~~~lv~~v~~~~ 36 (124)
T PF01113_consen 2 RVGIVGASGRMGRAIAEAILE----SPGFELVGAVDRKP 36 (124)
T ss_dssp EEEEETTTSHHHHHHHHHHHH----STTEEEEEEEETTT
T ss_pred EEEEECCCCHHHHHHHHHHHh----cCCcEEEEEEecCC
Confidence 689999999999999999995 5889955 566766
No 342
>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]
Probab=96.67 E-value=0.0031 Score=50.56 Aligned_cols=70 Identities=19% Similarity=0.041 Sum_probs=52.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHH-HHhcccccce
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF---PTALVDRYITFDALDPTDTALK-LSLISQEITN 85 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~-~~~~~~~~~~ 85 (211)
++++|.| .|-+|+++++.|. +.|++|+++++++..... .....+ .+.+|-+|++.+.++ +.. .|+
T Consensus 1 m~iiIiG-~G~vG~~va~~L~-----~~g~~Vv~Id~d~~~~~~~~~~~~~~~-~v~gd~t~~~~L~~agi~~----aD~ 69 (225)
T COG0569 1 MKIIIIG-AGRVGRSVARELS-----EEGHNVVLIDRDEERVEEFLADELDTH-VVIGDATDEDVLEEAGIDD----ADA 69 (225)
T ss_pred CEEEEEC-CcHHHHHHHHHHH-----hCCCceEEEEcCHHHHHHHhhhhcceE-EEEecCCCHHHHHhcCCCc----CCE
Confidence 3577777 8999999999999 799999999998765221 135667 899999999887775 333 566
Q ss_pred EEeec
Q 028258 86 LFWVP 90 (211)
Q Consensus 86 v~~~a 90 (211)
++-+.
T Consensus 70 vva~t 74 (225)
T COG0569 70 VVAAT 74 (225)
T ss_pred EEEee
Confidence 65444
No 343
>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus. The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....
Probab=96.67 E-value=0.0091 Score=42.24 Aligned_cols=69 Identities=28% Similarity=0.228 Sum_probs=48.5
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEeec
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLFWVP 90 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~a 90 (211)
++|.| .|-+|+.+++.|. +.+++|+++++++.... ....+++ ++.+|.+|++.+.++ ++.. .+.++.+.
T Consensus 1 vvI~G-~g~~~~~i~~~L~-----~~~~~vvvid~d~~~~~~~~~~~~~-~i~gd~~~~~~l~~a--~i~~-a~~vv~~~ 70 (116)
T PF02254_consen 1 VVIIG-YGRIGREIAEQLK-----EGGIDVVVIDRDPERVEELREEGVE-VIYGDATDPEVLERA--GIEK-ADAVVILT 70 (116)
T ss_dssp EEEES--SHHHHHHHHHHH-----HTTSEEEEEESSHHHHHHHHHTTSE-EEES-TTSHHHHHHT--TGGC-ESEEEEES
T ss_pred eEEEc-CCHHHHHHHHHHH-----hCCCEEEEEECCcHHHHHHHhcccc-cccccchhhhHHhhc--Cccc-cCEEEEcc
Confidence 57888 5789999999999 66679999999875421 1235588 999999999887665 2222 55665444
No 344
>KOG1494 consensus NAD-dependent malate dehydrogenase [Energy production and conversion]
Probab=96.66 E-value=0.027 Score=46.33 Aligned_cols=111 Identities=10% Similarity=0.021 Sum_probs=70.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCC---CCCCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPG---WFPTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~---~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..+|.|.||.|+||+-|...|.. ..... ....+-+..+. .+.+-+-. ......+-++.+++++++. |
T Consensus 28 ~~KVAvlGAaGGIGQPLSLLlK~----np~Vs~LaLYDi~~~~GVaaDlSHI~T~-s~V~g~~g~~~L~~al~~a----d 98 (345)
T KOG1494|consen 28 GLKVAVLGAAGGIGQPLSLLLKL----NPLVSELALYDIANTPGVAADLSHINTN-SSVVGFTGADGLENALKGA----D 98 (345)
T ss_pred cceEEEEecCCccCccHHHHHhc----CcccceeeeeecccCCcccccccccCCC-CceeccCChhHHHHHhcCC----C
Confidence 46899999999999999888763 12211 22223222211 11121112 2234555566888888884 6
Q ss_pred eEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEee
Q 028258 85 NLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLT 132 (211)
Q Consensus 85 ~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s 132 (211)
.|+.-|+.+.. ..++.+.+|....+.|..++.+. +++- .+.++|
T Consensus 99 vVvIPAGVPRKPGMTRDDLFn~NAgIv~~l~~aia~~---cP~A-~i~vIs 145 (345)
T KOG1494|consen 99 VVVIPAGVPRKPGMTRDDLFNINAGIVKTLAAAIAKC---CPNA-LILVIS 145 (345)
T ss_pred EEEecCCCCCCCCCcHHHhhhcchHHHHHHHHHHHhh---Cccc-eeEeec
Confidence 77778877542 67788999999999999999887 6532 334444
No 345
>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase
Probab=96.60 E-value=0.0038 Score=60.10 Aligned_cols=72 Identities=17% Similarity=0.049 Sum_probs=52.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-------------EEEEeCCCCCCC---CCCCCceeEEEeeCCCHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK-------------VYGAARRPPPGW---FPTALVDRYITFDALDPTDT 72 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-------------V~~~~R~~~~~~---~~~~~~~~~i~~Dl~d~~~~ 72 (211)
+|+|+|+|| |+||+.+++.|.+ ..+++ |.+.++++.... ...++++ .+..|+.|.+++
T Consensus 569 ~~rIlVLGA-G~VG~~~a~~La~----~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~-~v~lDv~D~e~L 642 (1042)
T PLN02819 569 SQNVLILGA-GRVCRPAAEYLAS----VKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAE-AVQLDVSDSESL 642 (1042)
T ss_pred CCcEEEECC-CHHHHHHHHHHHh----CcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCc-eEEeecCCHHHH
Confidence 578999995 9999999999985 23333 777777654321 1124678 899999999888
Q ss_pred HHHHHhcccccceEEeec
Q 028258 73 ALKLSLISQEITNLFWVP 90 (211)
Q Consensus 73 ~~~~~~~~~~~~~v~~~a 90 (211)
.+.+++ +|.|+.|.
T Consensus 643 ~~~v~~----~DaVIsal 656 (1042)
T PLN02819 643 LKYVSQ----VDVVISLL 656 (1042)
T ss_pred HHhhcC----CCEEEECC
Confidence 887776 56777664
No 346
>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases. Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....
Probab=96.57 E-value=0.00029 Score=51.92 Aligned_cols=73 Identities=18% Similarity=0.039 Sum_probs=47.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCCCCC---CCCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPPGWF---PTALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~~~~---~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
..++++|.|| |..|+.++..|. ..|.+ |+++.|+..+... ..++.. +-..++.+ +.+.+.. .
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~-----~~g~~~i~i~nRt~~ra~~l~~~~~~~~-~~~~~~~~---~~~~~~~----~ 76 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALA-----ALGAKEITIVNRTPERAEALAEEFGGVN-IEAIPLED---LEEALQE----A 76 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHH-----HTTSSEEEEEESSHHHHHHHHHHHTGCS-EEEEEGGG---HCHHHHT----E
T ss_pred CCCEEEEECC-HHHHHHHHHHHH-----HcCCCEEEEEECCHHHHHHHHHHcCccc-cceeeHHH---HHHHHhh----C
Confidence 4689999995 999999999999 57777 9999998664210 012222 33445544 3344554 6
Q ss_pred ceEEeecccCC
Q 028258 84 TNLFWVPLQVQ 94 (211)
Q Consensus 84 ~~v~~~a~~~~ 94 (211)
|.||++.....
T Consensus 77 DivI~aT~~~~ 87 (135)
T PF01488_consen 77 DIVINATPSGM 87 (135)
T ss_dssp SEEEE-SSTTS
T ss_pred CeEEEecCCCC
Confidence 78888876543
No 347
>PLN00112 malate dehydrogenase (NADP); Provisional
Probab=96.54 E-value=0.02 Score=50.42 Aligned_cols=99 Identities=11% Similarity=0.027 Sum_probs=61.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCC--CCCc--EEEEEeCCCCCCC-----CCCCC---ceeEEEeeCCCHHHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTP--GSPW--KVYGAARRPPPGW-----FPTAL---VDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~--~V~~~~R~~~~~~-----~~~~~---~~~~i~~Dl~d~~~~~~~~~ 77 (211)
-+|.|+||+|.||.+++..|+..+.- .++. +++.++++.+... +.+.. .. -+..-..+. +.++
T Consensus 101 ~KV~IIGAaG~VG~~~A~~L~~~~v~g~~~~i~~eLvliD~~~~~a~G~amDL~daa~~~~~-~v~i~~~~y----e~~k 175 (444)
T PLN00112 101 INVAVSGAAGMISNHLLFKLASGEVFGPDQPIALKLLGSERSKQALEGVAMELEDSLYPLLR-EVSIGIDPY----EVFQ 175 (444)
T ss_pred eEEEEECCCcHHHHHHHHHHHhcccccCCCCcccEEEEEcCCcchhHHHHHHHHHhhhhhcC-ceEEecCCH----HHhC
Confidence 37999999999999999999831000 0144 5788888766521 11110 01 111001222 2245
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHh
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVS 117 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~ 117 (211)
+ .|+||.+++... .+..+..+.|...++.+.+.+.+
T Consensus 176 d----aDiVVitAG~prkpG~tR~dLl~~N~~I~k~i~~~I~~ 214 (444)
T PLN00112 176 D----AEWALLIGAKPRGPGMERADLLDINGQIFAEQGKALNE 214 (444)
T ss_pred c----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 4 577888887743 24556789999999999999988
No 348
>PLN02602 lactate dehydrogenase
Probab=96.52 E-value=0.039 Score=47.18 Aligned_cols=94 Identities=14% Similarity=0.099 Sum_probs=60.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.|+|| |.||++++..|+.. .-.-++..++.++.... +.+ +... +..+ .|.+ .+++
T Consensus 38 ~KI~IIGa-G~VG~~~a~~l~~~---~l~~el~LiDi~~~~~~g~a~DL~~~~~~~~~~~--i~~~-~dy~----~~~d- 105 (350)
T PLN02602 38 TKVSVVGV-GNVGMAIAQTILTQ---DLADELALVDVNPDKLRGEMLDLQHAAAFLPRTK--ILAS-TDYA----VTAG- 105 (350)
T ss_pred CEEEEECC-CHHHHHHHHHHHhC---CCCCEEEEEeCCCchhhHHHHHHHhhhhcCCCCE--EEeC-CCHH----HhCC-
Confidence 58999995 99999999999831 12236888888765321 111 1112 2211 1221 1444
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+|+... .+..+....|....+.+.+.+.++
T Consensus 106 ---aDiVVitAG~~~k~g~tR~dll~~N~~I~~~i~~~I~~~ 144 (350)
T PLN02602 106 ---SDLCIVTAGARQIPGESRLNLLQRNVALFRKIIPELAKY 144 (350)
T ss_pred ---CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 578888888743 245567788999999999999887
No 349
>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]
Probab=96.47 E-value=0.0078 Score=51.40 Aligned_cols=79 Identities=11% Similarity=-0.076 Sum_probs=49.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.++.+||.||+|.+|++.++.+. ..+...++..++.+...+ ..-+. -...|..+++-.++..+.....+|+|
T Consensus 157 ~g~~vLv~ggsggVG~~aiQlAk-----~~~~~~v~t~~s~e~~~l~k~lGA--d~vvdy~~~~~~e~~kk~~~~~~DvV 229 (347)
T KOG1198|consen 157 KGKSVLVLGGSGGVGTAAIQLAK-----HAGAIKVVTACSKEKLELVKKLGA--DEVVDYKDENVVELIKKYTGKGVDVV 229 (347)
T ss_pred CCCeEEEEeCCcHHHHHHHHHHH-----hcCCcEEEEEcccchHHHHHHcCC--cEeecCCCHHHHHHHHhhcCCCccEE
Confidence 46789999999999999999888 577444444454443221 11111 22567777554444433212238999
Q ss_pred EeecccC
Q 028258 87 FWVPLQV 93 (211)
Q Consensus 87 ~~~a~~~ 93 (211)
+.|.+..
T Consensus 230 lD~vg~~ 236 (347)
T KOG1198|consen 230 LDCVGGS 236 (347)
T ss_pred EECCCCC
Confidence 9998764
No 350
>TIGR01850 argC N-acetyl-gamma-glutamyl-phosphate reductase, common form. This model represents the more common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and the gap architecture in a multiple sequence alignment. Bacterial members of this family tend to be found within Arg biosynthesis operons.
Probab=96.37 E-value=0.0082 Score=51.25 Aligned_cols=34 Identities=24% Similarity=0.278 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARRP 48 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~~ 48 (211)
+|.|+||||++|+.+++.|.+ ..++++..+ +++.
T Consensus 2 kVaIiGATG~vG~ellr~L~~----hP~~el~~l~~s~~ 36 (346)
T TIGR01850 2 KVAIVGASGYTGGELLRLLLN----HPEVEITYLVSSRE 36 (346)
T ss_pred EEEEECCCCHHHHHHHHHHHc----CCCceEEEEeccch
Confidence 689999999999999999995 557787744 5443
No 351
>PTZ00082 L-lactate dehydrogenase; Provisional
Probab=96.20 E-value=0.074 Score=44.95 Aligned_cols=98 Identities=9% Similarity=-0.062 Sum_probs=62.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----------CCCCCceeEEEeeCCCHHH
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----------FPTALVDRYITFDALDPTD 71 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----------~~~~~~~~~i~~Dl~d~~~ 71 (211)
|+|-.+++|.|+| +|.+|+.++..|+ ..|. +|..++++++... ......+ +.. ..|.
T Consensus 1 ~~~~~~~KI~IIG-aG~vG~~ia~~la-----~~gl~~i~LvDi~~~~~~~~~ld~~~~~~~~~~~~~-I~~--~~d~-- 69 (321)
T PTZ00082 1 MTMIKRRKISLIG-SGNIGGVMAYLIV-----LKNLGDVVLFDIVKNIPQGKALDISHSNVIAGSNSK-VIG--TNNY-- 69 (321)
T ss_pred CCCCCCCEEEEEC-CCHHHHHHHHHHH-----hCCCCeEEEEeCCCchhhHHHHHHHhhhhccCCCeE-EEE--CCCH--
Confidence 4444557899999 6999999999988 4664 7888998776321 0011122 211 1222
Q ss_pred HHHHHHhcccccceEEeecccCCc--------hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 72 TALKLSLISQEITNLFWVPLQVQE--------SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 72 ~~~~~~~~~~~~~~v~~~a~~~~~--------~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|.||.+++.... +..+....|....+.+++.+.+.
T Consensus 70 --~~l~~----aDiVI~tag~~~~~~~~~~~~~r~~~l~~n~~i~~~i~~~i~~~ 118 (321)
T PTZ00082 70 --EDIAG----SDVVIVTAGLTKRPGKSDKEWNRDDLLPLNAKIMDEVAEGIKKY 118 (321)
T ss_pred --HHhCC----CCEEEECCCCCCCCCCCcCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 23454 5788888866431 33345677888888888888887
No 352
>TIGR01915 npdG NADPH-dependent F420 reductase. This model represents a subset of a parent family described by Pfam model pfam03807. Unlike the parent family, members of this family are found only in species with evidence of coenzyme F420. All members of this family are believed to act as NADPH-dependent F420 reductase.
Probab=96.16 E-value=0.0073 Score=48.09 Aligned_cols=35 Identities=26% Similarity=0.202 Sum_probs=31.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+||+|.+|+.++..|. +.|++|++.+|++++
T Consensus 2 kI~IIGG~G~mG~ala~~L~-----~~G~~V~v~~r~~~~ 36 (219)
T TIGR01915 2 KIAVLGGTGDQGKGLALRLA-----KAGNKIIIGSRDLEK 36 (219)
T ss_pred EEEEEcCCCHHHHHHHHHHH-----hCCCEEEEEEcCHHH
Confidence 58999999999999999999 688999999997654
No 353
>cd00650 LDH_MDH_like NAD-dependent, lactate dehydrogenase-like, 2-hydroxycarboxylate dehydrogenase family. Members of this family include ubiquitous enzymes like L-lactate dehydrogenases (LDH), L-2-hydroxyisocaproate dehydrogenases, and some malate dehydrogenases (MDH). LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH/MDH-like proteins are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains
Probab=96.13 E-value=0.019 Score=47.07 Aligned_cols=92 Identities=12% Similarity=-0.024 Sum_probs=60.0
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCC----cEEEEEeCCCCCCCC-----C---CC--CceeEEEeeCCCHHHHHHHHH
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSP----WKVYGAARRPPPGWF-----P---TA--LVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g----~~V~~~~R~~~~~~~-----~---~~--~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
|.|+||+|.+|..++..|+ ..+ .+|..+++++.+... . .. ..+ + . .++ +..++++
T Consensus 1 I~IIGagG~vG~~ia~~l~-----~~~~~~~~el~L~D~~~~~l~~~~~dl~~~~~~~~~~~-i-~--~~~--d~~~~~~ 69 (263)
T cd00650 1 IAVIGAGGNVGPALAFGLA-----DGSVLLAIELVLYDIDEEKLKGVAMDLQDAVEPLADIK-V-S--ITD--DPYEAFK 69 (263)
T ss_pred CEEECCCChHHHHHHHHHH-----hCCCCcceEEEEEeCCcccchHHHHHHHHhhhhccCcE-E-E--ECC--chHHHhC
Confidence 4789999999999999998 355 689999987654210 0 01 111 1 1 111 2344555
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 70 ~----aDiVv~t~~~~~~~g~~r~~~~~~n~~i~~~i~~~i~~~ 109 (263)
T cd00650 70 D----ADVVIITAGVGRKPGMGRLDLLKRNVPIVKEIGDNIEKY 109 (263)
T ss_pred C----CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5 577877776533 234455677888888999999887
No 354
>PLN02383 aspartate semialdehyde dehydrogenase
Probab=96.07 E-value=0.032 Score=47.64 Aligned_cols=23 Identities=30% Similarity=0.452 Sum_probs=21.1
Q ss_pred CCCeEEEEcCCChHHHHHHHHhh
Q 028258 8 PKSVALIIGVTGISGLSLAEALK 30 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~ 30 (211)
++.+|.|.||||++|+.|++.|.
T Consensus 6 ~~~kVaVvGAtG~vG~eLlrlL~ 28 (344)
T PLN02383 6 NGPSVAIVGVTGAVGQEFLSVLT 28 (344)
T ss_pred CCCeEEEEcCCChHHHHHHHHHH
Confidence 45789999999999999999998
No 355
>PRK06849 hypothetical protein; Provisional
Probab=96.01 E-value=0.013 Score=50.76 Aligned_cols=38 Identities=26% Similarity=0.235 Sum_probs=33.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.+++|||||++..+|..+++.|. +.|++|++++..+.
T Consensus 2 ~~~~~VLI~G~~~~~~l~iar~l~-----~~G~~Vi~~d~~~~ 39 (389)
T PRK06849 2 NTKKTVLITGARAPAALELARLFH-----NAGHTVILADSLKY 39 (389)
T ss_pred CCCCEEEEeCCCcHHHHHHHHHHH-----HCCCEEEEEeCCch
Confidence 457899999999999999999999 68999999988754
No 356
>PTZ00117 malate dehydrogenase; Provisional
Probab=95.95 E-value=0.073 Score=44.93 Aligned_cols=96 Identities=11% Similarity=-0.042 Sum_probs=60.8
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-----CCC----CCceeEEEeeCCCHHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-----FPT----ALVDRYITFDALDPTDTALKLS 77 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-----~~~----~~~~~~i~~Dl~d~~~~~~~~~ 77 (211)
.+++|.|+|| |.+|+.++..|+ ..| .+|..++++++... ..+ ......+.. -.| ++ .++
T Consensus 4 ~~~KI~IIGa-G~vG~~ia~~l~-----~~~~~~l~L~Di~~~~~~g~~lDl~~~~~~~~~~~~i~~-~~d---~~-~l~ 72 (319)
T PTZ00117 4 KRKKISMIGA-GQIGSTVALLIL-----QKNLGDVVLYDVIKGVPQGKALDLKHFSTLVGSNINILG-TNN---YE-DIK 72 (319)
T ss_pred CCcEEEEECC-CHHHHHHHHHHH-----HCCCCeEEEEECCCccchhHHHHHhhhccccCCCeEEEe-CCC---HH-HhC
Confidence 3568999997 999999999988 355 57888998765321 000 000001111 122 22 455
Q ss_pred hcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 78 LISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 78 ~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+ .|.|+.+++... .+..+....|....+.+.+.+.+.
T Consensus 73 ~----ADiVVitag~~~~~g~~r~dll~~n~~i~~~i~~~i~~~ 112 (319)
T PTZ00117 73 D----SDVVVITAGVQRKEEMTREDLLTINGKIMKSVAESVKKY 112 (319)
T ss_pred C----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 4 577888886533 244556778888888888888887
No 357
>cd05290 LDH_3 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of some bacterial LDHs from firmicutes, gammaproteobacteria, and actinobacteria. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenase, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.90 E-value=0.22 Score=41.91 Aligned_cols=90 Identities=8% Similarity=-0.020 Sum_probs=60.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCCCCC-----CCC-------CCceeEEEeeCCCHHHHHHHH
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPPPGW-----FPT-------ALVDRYITFDALDPTDTALKL 76 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~~~~-----~~~-------~~~~~~i~~Dl~d~~~~~~~~ 76 (211)
+|.|+|| |.||+.++..|+. .+. ++..++.++.... +.+ ..+. .... |. +.+
T Consensus 1 Ki~IIGa-G~VG~~~a~~l~~-----~~~~~elvL~Di~~~~a~g~a~DL~~~~~~~~~~~~~-i~~~---~y----~~~ 66 (307)
T cd05290 1 KLVVIGA-GHVGSAVLNYALA-----LGLFSEIVLIDVNEGVAEGEALDFHHATALTYSTNTK-IRAG---DY----DDC 66 (307)
T ss_pred CEEEECC-CHHHHHHHHHHHh-----cCCCCEEEEEeCCcchhhHHHHHHHhhhccCCCCCEE-EEEC---CH----HHh
Confidence 4788997 9999999999983 333 5888888665321 111 1233 3222 22 234
Q ss_pred HhcccccceEEeecccCCc---h--hHHHHhhcHHHHHHHHHHHHhc
Q 028258 77 SLISQEITNLFWVPLQVQE---S--EEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 77 ~~~~~~~~~v~~~a~~~~~---~--~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
++ .|.|+.+|+.... + ..+....|...++.+.+.+.++
T Consensus 67 ~~----aDivvitaG~~~kpg~tr~R~dll~~N~~I~~~i~~~i~~~ 109 (307)
T cd05290 67 AD----ADIIVITAGPSIDPGNTDDRLDLAQTNAKIIREIMGNITKV 109 (307)
T ss_pred CC----CCEEEECCCCCCCCCCCchHHHHHHHHHHHHHHHHHHHHHh
Confidence 54 5778888887432 3 3667788999999999999988
No 358
>PRK11863 N-acetyl-gamma-glutamyl-phosphate reductase; Provisional
Probab=95.86 E-value=0.02 Score=48.18 Aligned_cols=37 Identities=24% Similarity=0.320 Sum_probs=29.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|+.+|.|.||||++|..|++.|.+ ....++..+.++.
T Consensus 1 ~~~~VaIvGAtGy~G~eLlrlL~~----hp~~~l~~~~s~~ 37 (313)
T PRK11863 1 MKPKVFIDGEAGTTGLQIRERLAG----RSDIELLSIPEAK 37 (313)
T ss_pred CCcEEEEECCCCHHHHHHHHHHhc----CCCeEEEEEecCC
Confidence 457899999999999999999985 4556777666554
No 359
>PRK00048 dihydrodipicolinate reductase; Provisional
Probab=95.84 E-value=0.1 Score=42.67 Aligned_cols=36 Identities=19% Similarity=0.273 Sum_probs=28.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~~ 49 (211)
.+|.|+|++|.+|+.+++.+.+ ..+.++.+ +++++.
T Consensus 2 mkV~IiG~~G~mG~~i~~~l~~----~~~~elvav~d~~~~ 38 (257)
T PRK00048 2 IKVAVAGASGRMGRELIEAVEA----AEDLELVAAVDRPGS 38 (257)
T ss_pred cEEEEECCCCHHHHHHHHHHHh----CCCCEEEEEEecCCc
Confidence 4689999999999999998874 45788665 555543
No 360
>PRK09288 purT phosphoribosylglycinamide formyltransferase 2; Validated
Probab=95.83 E-value=0.048 Score=47.11 Aligned_cols=71 Identities=13% Similarity=0.047 Sum_probs=50.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|+|+|+| +|..|+.++..+. +.|++|+.++.++...... -.-. ++..|..|.+.+.+.++... +|.|+.
T Consensus 12 ~~~ilIiG-~g~~~~~~~~a~~-----~~G~~v~~~~~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~vi~ 81 (395)
T PRK09288 12 ATRVMLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SHVIDMLDGDALRAVIEREK--PDYIVP 81 (395)
T ss_pred CCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCCCchHH-hhhh-eEECCCCCHHHHHHHHHHhC--CCEEEE
Confidence 46899998 5789999999988 6899999999876532111 1113 56778889888888777543 676654
Q ss_pred e
Q 028258 89 V 89 (211)
Q Consensus 89 ~ 89 (211)
.
T Consensus 82 ~ 82 (395)
T PRK09288 82 E 82 (395)
T ss_pred e
Confidence 3
No 361
>cd05293 LDH_1 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed of eukaryotic LDHs. Vertebrate LDHs are non-allosteric. This is in contrast to some bacterial LDHs that are activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.83 E-value=0.11 Score=43.85 Aligned_cols=95 Identities=14% Similarity=0.040 Sum_probs=60.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+.+|.|+|| |.||+.++..|+.. ...-++..++.+..... +.+ .... +... .|.+ .+++
T Consensus 3 ~~Ki~IiGa-G~VG~~~a~~l~~~---~~~~el~LiD~~~~~~~g~a~Dl~~~~~~~~~~~-v~~~--~dy~----~~~~ 71 (312)
T cd05293 3 RNKVTVVGV-GQVGMACAISILAK---GLADELVLVDVVEDKLKGEAMDLQHGSAFLKNPK-IEAD--KDYS----VTAN 71 (312)
T ss_pred CCEEEEECC-CHHHHHHHHHHHhc---CCCCEEEEEeCCccHHHHHHHHHHHhhccCCCCE-EEEC--CCHH----HhCC
Confidence 458999996 99999999998731 22346888888665311 001 1112 2221 1222 2444
Q ss_pred cccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.... +..+....|....+.+.+.+.+.
T Consensus 72 ----adivvitaG~~~k~g~~R~dll~~N~~i~~~~~~~i~~~ 110 (312)
T cd05293 72 ----SKVVIVTAGARQNEGESRLDLVQRNVDIFKGIIPKLVKY 110 (312)
T ss_pred ----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 5788888876432 44566788999999999988887
No 362
>PRK06598 aspartate-semialdehyde dehydrogenase; Reviewed
Probab=95.81 E-value=0.037 Score=47.56 Aligned_cols=34 Identities=12% Similarity=0.137 Sum_probs=26.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcE---EEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~---V~~~~R~ 47 (211)
.+|.|.||||++|+.+++.|++ +..+. +..++.+
T Consensus 2 ~~VAIVGATG~vG~ell~llL~----~~~f~~~~l~~~ss~ 38 (369)
T PRK06598 2 KKVGFVGWRGMVGSVLMQRMVE----ENDFDLIEPVFFSTS 38 (369)
T ss_pred eEEEEEeCCCHHHHHHHHHHHh----CCCCCcCcEEEecch
Confidence 4789999999999999996664 66776 6665553
No 363
>PLN02948 phosphoribosylaminoimidazole carboxylase
Probab=95.78 E-value=0.063 Score=49.04 Aligned_cols=70 Identities=13% Similarity=-0.076 Sum_probs=51.7
Q ss_pred ccccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 2 EKQDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 2 ~~~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|.+++.|+|+|+| +|..|+-++..+. +.|++|++++.++....... .-+ .+..|..|.+.+.+..+.+
T Consensus 15 ~~~~~~~~k~IgIIG-gGqlg~mla~aA~-----~lG~~Vi~ld~~~~apa~~~-AD~-~~v~~~~D~~~l~~~a~~~ 84 (577)
T PLN02948 15 KPVHGVSETVVGVLG-GGQLGRMLCQAAS-----QMGIKVKVLDPLEDCPASSV-AAR-HVVGSFDDRAAVREFAKRC 84 (577)
T ss_pred ccccCCCCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCCCchhhh-Cce-eeeCCCCCHHHHHHHHHHC
Confidence 456667789999998 6799999999999 68999999988765321111 113 5568888988877776663
No 364
>COG2085 Predicted dinucleotide-binding enzymes [General function prediction only]
Probab=95.77 E-value=0.015 Score=45.82 Aligned_cols=35 Identities=31% Similarity=0.284 Sum_probs=28.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++.|. |+|.||+.|+++|. ..||+|++-+|+.++
T Consensus 2 ~~~~i~-GtGniG~alA~~~a-----~ag~eV~igs~r~~~ 36 (211)
T COG2085 2 MIIAII-GTGNIGSALALRLA-----KAGHEVIIGSSRGPK 36 (211)
T ss_pred cEEEEe-ccChHHHHHHHHHH-----hCCCeEEEecCCChh
Confidence 456664 59999999999999 699999988776653
No 365
>PRK09496 trkA potassium transporter peripheral membrane component; Reviewed
Probab=95.71 E-value=0.016 Score=51.02 Aligned_cols=71 Identities=18% Similarity=0.122 Sum_probs=51.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C--CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F--PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
+++++|.|+ |.+|+.+++.|. +.|++|++++++++... . ...++. ++.+|.++++.+.++- ++. .+.
T Consensus 231 ~~~iiIiG~-G~~g~~l~~~L~-----~~~~~v~vid~~~~~~~~~~~~~~~~~-~i~gd~~~~~~L~~~~--~~~-a~~ 300 (453)
T PRK09496 231 VKRVMIVGG-GNIGYYLAKLLE-----KEGYSVKLIERDPERAEELAEELPNTL-VLHGDGTDQELLEEEG--IDE-ADA 300 (453)
T ss_pred CCEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEECCHHHHHHHHHHCCCCe-EEECCCCCHHHHHhcC--Ccc-CCE
Confidence 578999995 999999999999 68999999998876421 0 124677 8999999988765542 222 455
Q ss_pred EEee
Q 028258 86 LFWV 89 (211)
Q Consensus 86 v~~~ 89 (211)
|+.+
T Consensus 301 vi~~ 304 (453)
T PRK09496 301 FIAL 304 (453)
T ss_pred EEEC
Confidence 5433
No 366
>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.
Probab=95.71 E-value=0.015 Score=48.42 Aligned_cols=72 Identities=15% Similarity=0.146 Sum_probs=46.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.++||+||+|.+|.++++.+. ..|.+|++++|++.... ....+.. .+ .|..+ +.+.+..... +|.++
T Consensus 163 ~~~vlI~ga~g~vG~~~~~~a~-----~~g~~v~~~~~~~~~~~~~~~~~~~-~~-~~~~~---~~~~~~~~~~-~d~v~ 231 (332)
T cd08259 163 GDTVLVTGAGGGVGIHAIQLAK-----ALGARVIAVTRSPEKLKILKELGAD-YV-IDGSK---FSEDVKKLGG-ADVVI 231 (332)
T ss_pred CCEEEEECCCCHHHHHHHHHHH-----HcCCeEEEEeCCHHHHHHHHHcCCc-EE-EecHH---HHHHHHhccC-CCEEE
Confidence 5689999999999999999998 68999999988654311 0111122 11 12222 3333443333 78888
Q ss_pred eecc
Q 028258 88 WVPL 91 (211)
Q Consensus 88 ~~a~ 91 (211)
++++
T Consensus 232 ~~~g 235 (332)
T cd08259 232 ELVG 235 (332)
T ss_pred ECCC
Confidence 8875
No 367
>TIGR01757 Malate-DH_plant malate dehydrogenase, NADP-dependent. This model represents the NADP-dependent malate dehydrogenase found in plants, mosses and green algae and localized to the chloroplast. Malate dehydrogenase converts oxaloacetate into malate, a critical step in the C4 cycle which allows circumvention of the effects of photorespiration. Malate is subsequenctly transported from the chloroplast to the cytoplasm (and then to the bundle sheath cells in C4 plants). The plant and moss enzymes are light regulated via cysteine disulfide bonds. The enzyme from Sorghum has been crystallized.
Probab=95.69 E-value=0.085 Score=45.71 Aligned_cols=98 Identities=10% Similarity=-0.037 Sum_probs=59.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC--CcEEEEE--eCCCCCCC-----CCC------CCceeEEEeeCCCHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS--PWKVYGA--ARRPPPGW-----FPT------ALVDRYITFDALDPTDTA 73 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~--g~~V~~~--~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~ 73 (211)
.-+|.|+||+|.+|.+++..|+..+--.. ...++.+ +++.+... +.+ .++. + .. .+ .
T Consensus 44 p~KV~IIGAaG~VG~~~A~~l~~~~l~~~~~ei~L~L~diD~~~~~a~g~a~DL~d~a~~~~~~v~-i-~~--~~----y 115 (387)
T TIGR01757 44 TVNVAVSGAAGMISNHLLFMLASGEVFGQDQPIALKLLGSERSKEALEGVAMELEDSLYPLLREVS-I-GI--DP----Y 115 (387)
T ss_pred CeEEEEECCCcHHHHHHHHHHHhccccCCCCceEEEEeccCccchhhhHHHHHHHHhhhhhcCceE-E-ec--CC----H
Confidence 34799999999999999999984211000 1123333 55554321 001 1111 1 11 12 2
Q ss_pred HHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|+|+.+|+.+. .+..+....|...++.+.+.+.++
T Consensus 116 ~~~kd----aDIVVitAG~prkpg~tR~dll~~N~~I~k~i~~~I~~~ 159 (387)
T TIGR01757 116 EVFED----ADWALLIGAKPRGPGMERADLLDINGQIFADQGKALNAV 159 (387)
T ss_pred HHhCC----CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 23454 578888888753 245567888999999999999885
No 368
>cd05292 LDH_2 A subgroup of L-lactate dehydrogenases. L-lactate dehydrogenases (LDH) are tetrameric enzymes catalyzing the last step of glycolysis in which pyruvate is converted to L-lactate. This subgroup is composed predominantly of bacterial LDHs and a few fungal LDHs. Bacterial LDHs may be non-allosteric or may be activated by an allosteric effector such as fructose-1,6-bisphosphate. LDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.61 E-value=0.042 Score=46.17 Aligned_cols=90 Identities=14% Similarity=0.050 Sum_probs=59.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CCC-----CCceeEEEeeCCCHHHHHHHHHh
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FPT-----ALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~~-----~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
+|.|+|+ |.+|..++..|+ ..| .+|.++++++.+.. +.+ .... ... .|. +.+++
T Consensus 2 kI~IIGa-G~VG~~~a~~l~-----~~g~~~ev~l~D~~~~~~~g~a~dl~~~~~~~~~~~-i~~---~d~----~~l~~ 67 (308)
T cd05292 2 KVAIVGA-GFVGSTTAYALL-----LRGLASEIVLVDINKAKAEGEAMDLAHGTPFVKPVR-IYA---GDY----ADCKG 67 (308)
T ss_pred EEEEECC-CHHHHHHHHHHH-----HcCCCCEEEEEECCchhhhhHHHHHHccccccCCeE-Eee---CCH----HHhCC
Confidence 5899996 999999999998 466 57999999765321 111 1111 111 222 22444
Q ss_pred cccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 79 ISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 79 ~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.++.+++... .+..+....|....+.+++.+.+.
T Consensus 68 ----aDiViita~~~~~~~~~r~dl~~~n~~i~~~~~~~l~~~ 106 (308)
T cd05292 68 ----ADVVVITAGANQKPGETRLDLLKRNVAIFKEIIPQILKY 106 (308)
T ss_pred ----CCEEEEccCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 577888877643 244456678998888899888877
No 369
>TIGR01142 purT phosphoribosylglycinamide formyltransferase 2. This enzyme is an alternative to PurN (TIGR00639)
Probab=95.60 E-value=0.065 Score=46.05 Aligned_cols=69 Identities=13% Similarity=0.043 Sum_probs=50.8
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEee
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFWV 89 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~~ 89 (211)
+|+|+| +|..|..+++.+. +.|++|++++.++...... -.-+ .+..|..|++.+.+.++..+ +|.|+..
T Consensus 1 kililG-~g~~~~~l~~aa~-----~~G~~v~~~d~~~~~~~~~-~ad~-~~~~~~~d~~~l~~~~~~~~--id~v~~~ 69 (380)
T TIGR01142 1 RVLLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPAMQ-VAHR-SYVINMLDGDALRAVIEREK--PDYIVPE 69 (380)
T ss_pred CEEEEC-CCHHHHHHHHHHH-----HcCCEEEEEeCCCCCchhh-hCce-EEEcCCCCHHHHHHHHHHhC--CCEEEec
Confidence 589999 6999999999998 6899999999876542211 1124 66678889988888777543 6776543
No 370
>cd05295 MDH_like Malate dehydrogenase-like. These MDH-like proteins are related to other groups in the MDH family but do not have conserved substrate and cofactor binding residues. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. Members of this subgroup are uncharacterized MDH-like proteins from animals. They are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenases, aminoacid dehydrogenases, repressor rex, and NAD-binding potassium channel domains, among others.
Probab=95.58 E-value=0.074 Score=46.95 Aligned_cols=98 Identities=6% Similarity=-0.159 Sum_probs=59.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCC--CCCcEEEEEeCC--CCCCC-----CC------CCCceeEEEeeCCCHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTP--GSPWKVYGAARR--PPPGW-----FP------TALVDRYITFDALDPTDTA 73 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~--~~g~~V~~~~R~--~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~ 73 (211)
.-+|+||||+|.||.+|+..+.+..-- ++...++.++.. ..... +. ...+. +. . .+ .
T Consensus 123 p~~V~vtgAag~i~Y~l~~~ia~G~~fG~~~~v~L~LlDi~~~~~~l~G~amDL~D~a~pll~~v~-i~-~--~~----~ 194 (452)
T cd05295 123 PLQVCITNASAPLCYHLIPSLASGEVFGMEEEISIHLLDSPENLEKLKGLVMEVEDLAFPLLRGIS-VT-T--DL----D 194 (452)
T ss_pred ceEEEEecCcHHHHHHHHHHHhCCcccCCCCeEEEEEEcCCCchhhHHHHHHHHHHhHHhhcCCcE-EE-E--CC----H
Confidence 357999999999999999999842111 112224455553 22110 00 11222 21 1 11 2
Q ss_pred HHHHhcccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 74 LKLSLISQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 74 ~~~~~~~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
+.+++ .|+||.+++... .+..+..+.|...++.+.+.+.+.
T Consensus 195 ea~~d----aDvvIitag~prk~G~~R~DLL~~N~~Ifk~~g~~I~~~ 238 (452)
T cd05295 195 VAFKD----AHVIVLLDDFLIKEGEDLEGCIRSRVAICQLYGPLIEKN 238 (452)
T ss_pred HHhCC----CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 34555 577887887643 245567789999999999999887
No 371
>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]
Probab=95.51 E-value=0.056 Score=45.13 Aligned_cols=70 Identities=13% Similarity=0.042 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.+++++.| ||-+|+.++-++. .-|.+|++++|-..... .+-.-. ....|+.|.+.+...++..+ +|+|+-
T Consensus 12 a~kvmLLG-SGELGKEvaIe~Q-----RLG~eViAVDrY~~APA-mqVAhr-s~Vi~MlD~~al~avv~rek--Pd~IVp 81 (394)
T COG0027 12 ATKVMLLG-SGELGKEVAIEAQ-----RLGVEVIAVDRYANAPA-MQVAHR-SYVIDMLDGDALRAVVEREK--PDYIVP 81 (394)
T ss_pred CeEEEEec-CCccchHHHHHHH-----hcCCEEEEecCcCCChh-hhhhhh-eeeeeccCHHHHHHHHHhhC--CCeeee
Confidence 35688887 9999999999998 68999999999655321 011112 56789999999999988865 788763
No 372
>PRK04148 hypothetical protein; Provisional
Probab=95.50 E-value=0.0065 Score=44.63 Aligned_cols=54 Identities=17% Similarity=0.112 Sum_probs=42.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPT 70 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~ 70 (211)
++++++.| +| -|.+++..|. +.|++|++++.++.... .....++ .+.+|+.+++
T Consensus 17 ~~kileIG-~G-fG~~vA~~L~-----~~G~~ViaIDi~~~aV~~a~~~~~~-~v~dDlf~p~ 71 (134)
T PRK04148 17 NKKIVELG-IG-FYFKVAKKLK-----ESGFDVIVIDINEKAVEKAKKLGLN-AFVDDLFNPN 71 (134)
T ss_pred CCEEEEEE-ec-CCHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHhCCe-EEECcCCCCC
Confidence 46799998 66 8888999999 68999999999877421 1234567 9999999886
No 373
>PRK10669 putative cation:proton antiport protein; Provisional
Probab=95.48 E-value=0.013 Score=53.24 Aligned_cols=60 Identities=17% Similarity=0.053 Sum_probs=48.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+.+++|.| .|-+|+++++.|. ++|++|++++++++... ..+.+.+ .+.+|.+|++.++++
T Consensus 417 ~~hiiI~G-~G~~G~~la~~L~-----~~g~~vvvId~d~~~~~~~~~~g~~-~i~GD~~~~~~L~~a 477 (558)
T PRK10669 417 CNHALLVG-YGRVGSLLGEKLL-----AAGIPLVVIETSRTRVDELRERGIR-AVLGNAANEEIMQLA 477 (558)
T ss_pred CCCEEEEC-CChHHHHHHHHHH-----HCCCCEEEEECCHHHHHHHHHCCCe-EEEcCCCCHHHHHhc
Confidence 46789998 8999999999999 68999999999876421 2245788 999999998876554
No 374
>PRK06223 malate dehydrogenase; Reviewed
Probab=95.45 E-value=0.11 Score=43.46 Aligned_cols=97 Identities=16% Similarity=0.035 Sum_probs=57.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCC-ceeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTAL-VDRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++|.|+|| |.+|+.++..|+ ..|. +|++++++++... ..+.. .. .....+....+. +.+++
T Consensus 3 ~KI~VIGa-G~vG~~ia~~la-----~~~~~ev~L~D~~~~~~~~~~~dl~~~~~~~-~~~~~i~~~~d~-~~~~~---- 70 (307)
T PRK06223 3 KKISIIGA-GNVGATLAHLLA-----LKELGDVVLFDIVEGVPQGKALDIAEAAPVE-GFDTKITGTNDY-EDIAG---- 70 (307)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----hCCCeEEEEEECCCchhHHHHHHHHhhhhhc-CCCcEEEeCCCH-HHHCC----
Confidence 57999998 999999999998 4544 8999998665321 00100 00 000011100112 23444
Q ss_pred cceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 83 ITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 83 ~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 71 aDiVii~~~~p~~~~~~r~~~~~~n~~i~~~i~~~i~~~ 109 (307)
T PRK06223 71 SDVVVITAGVPRKPGMSRDDLLGINAKIMKDVAEGIKKY 109 (307)
T ss_pred CCEEEECCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5778877765432 23345566888888888888776
No 375
>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]
Probab=95.43 E-value=0.021 Score=48.39 Aligned_cols=76 Identities=9% Similarity=0.006 Sum_probs=44.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-CCCCCCceeEEEeeCCCHHHHHHHHHhcc--cccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-WFPTALVDRYITFDALDPTDTALKLSLIS--QEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~--~~~~~ 85 (211)
.+++||+||+|.+|+..++.+. +.|+.+++++.++.+. .....+.. ...|..+.+ +.+.++.+. ..+|+
T Consensus 143 g~~VLV~gaaGgVG~~aiQlAk-----~~G~~~v~~~~s~~k~~~~~~lGAd--~vi~y~~~~-~~~~v~~~t~g~gvDv 214 (326)
T COG0604 143 GETVLVHGAAGGVGSAAIQLAK-----ALGATVVAVVSSSEKLELLKELGAD--HVINYREED-FVEQVRELTGGKGVDV 214 (326)
T ss_pred CCEEEEecCCchHHHHHHHHHH-----HcCCcEEEEecCHHHHHHHHhcCCC--EEEcCCccc-HHHHHHHHcCCCCceE
Confidence 5789999999999999999888 6886766666554421 11112222 123344433 333333221 12788
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
|+.+.+.
T Consensus 215 v~D~vG~ 221 (326)
T COG0604 215 VLDTVGG 221 (326)
T ss_pred EEECCCH
Confidence 8776653
No 376
>TIGR01763 MalateDH_bact malate dehydrogenase, NAD-dependent. The annotation of Botryococcus braunii as lactate dehydrogenase appears top be in error. This was initially annotated as MDH by Swiss-Prot and then changed. The rationale for either of these annotations is not traceable.
Probab=95.40 E-value=0.12 Score=43.36 Aligned_cols=97 Identities=12% Similarity=-0.008 Sum_probs=58.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCCCCc-eeEEEeeCCCHHHHHHHHHhcccc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPTALV-DRYITFDALDPTDTALKLSLISQE 82 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~~~~-~~~i~~Dl~d~~~~~~~~~~~~~~ 82 (211)
++|.|+|+ |.+|..++..|+ ..|+ +|+++++.+.... ..++.. + .....+.-..++.+ +++
T Consensus 2 ~KV~VIGa-G~vG~~iA~~la-----~~g~~~VvlvDi~~~l~~g~a~d~~~~~~~~-~~~~~i~~t~d~~~-~~~---- 69 (305)
T TIGR01763 2 KKISVIGA-GFVGATTAFRLA-----EKELADLVLLDVVEGIPQGKALDMYEASPVG-GFDTKVTGTNNYAD-TAN---- 69 (305)
T ss_pred CEEEEECc-CHHHHHHHHHHH-----HcCCCeEEEEeCCCChhHHHHHhhhhhhhcc-CCCcEEEecCCHHH-hCC----
Confidence 46899995 999999999998 4665 7999998544211 011110 0 00011110011222 333
Q ss_pred cceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 83 ITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 83 ~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 70 aDiVIitag~p~~~~~sR~~l~~~N~~iv~~i~~~I~~~ 108 (305)
T TIGR01763 70 SDIVVITAGLPRKPGMSREDLLSMNAGIVREVTGRIMEH 108 (305)
T ss_pred CCEEEEcCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888886542 33356677888888888888876
No 377
>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated
Probab=95.36 E-value=0.14 Score=43.58 Aligned_cols=36 Identities=33% Similarity=0.248 Sum_probs=29.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
.++++|+|.| .|++|++++..|. ..|. ++++++++.
T Consensus 22 L~~~~VlVvG-~GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (339)
T PRK07688 22 LREKHVLIIG-AGALGTANAEMLV-----RAGVGKVTIVDRDY 58 (339)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHH-----HcCCCeEEEEeCCc
Confidence 3467899999 5999999999999 5777 688888754
No 378
>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional
Probab=95.29 E-value=0.085 Score=48.45 Aligned_cols=72 Identities=13% Similarity=-0.013 Sum_probs=53.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
+.+++|.| .|-+|+.+++.|. +.|+++++++++++... ....+.. ++.+|.+|++.++++ +++. .+.++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a--gi~~-A~~vv 469 (601)
T PRK03659 400 KPQVIIVG-FGRFGQVIGRLLM-----ANKMRITVLERDISAVNLMRKYGYK-VYYGDATQLELLRAA--GAEK-AEAIV 469 (601)
T ss_pred cCCEEEec-CchHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhCCCe-EEEeeCCCHHHHHhc--CCcc-CCEEE
Confidence 45788888 9999999999999 68999999999876422 1235678 999999999876654 2222 45554
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 470 ~~~ 472 (601)
T PRK03659 470 ITC 472 (601)
T ss_pred EEe
Confidence 333
No 379
>PRK08040 putative semialdehyde dehydrogenase; Provisional
Probab=95.26 E-value=0.044 Score=46.62 Aligned_cols=39 Identities=23% Similarity=0.234 Sum_probs=28.1
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+++.+|.|.||||++|+.+++.|.+.. ....++..++.+
T Consensus 2 ~~~~~vaIvGATG~vG~ellrlL~~~~--hP~~~l~~laS~ 40 (336)
T PRK08040 2 SEGWNIALLGATGAVGEALLELLAERQ--FPVGELYALASE 40 (336)
T ss_pred CCCCEEEEEccCCHHHHHHHHHHhcCC--CCceEEEEEEcc
Confidence 456789999999999999999998310 133456666544
No 380
>PRK06019 phosphoribosylaminoimidazole carboxylase ATPase subunit; Reviewed
Probab=95.24 E-value=0.11 Score=44.65 Aligned_cols=62 Identities=23% Similarity=0.030 Sum_probs=47.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
++|+|.|+ |.+|+-++..+. +.|++|++++.++..... .-.-+ .+..|+.|.+.+.+.++.+
T Consensus 3 ~~igilG~-Gql~~ml~~aa~-----~lG~~v~~~d~~~~~pa~-~~ad~-~~~~~~~D~~~l~~~a~~~ 64 (372)
T PRK06019 3 KTIGIIGG-GQLGRMLALAAA-----PLGYKVIVLDPDPDSPAA-QVADE-VIVADYDDVAALRELAEQC 64 (372)
T ss_pred CEEEEECC-CHHHHHHHHHHH-----HcCCEEEEEeCCCCCchh-HhCce-EEecCCCCHHHHHHHHhcC
Confidence 67999995 899999999998 689999999987654211 11123 6678999999888887754
No 381
>PRK06728 aspartate-semialdehyde dehydrogenase; Provisional
Probab=95.24 E-value=0.11 Score=44.28 Aligned_cols=35 Identities=20% Similarity=0.321 Sum_probs=27.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE---EEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWK---VYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~---V~~~~R~ 47 (211)
+.+|.|.||||++|+.+++.|.+ +..++ +..++..
T Consensus 5 ~~~VaIvGATG~vG~ell~lL~~----h~~f~v~~l~~~aS~ 42 (347)
T PRK06728 5 GYHVAVVGATGAVGQKIIELLEK----ETKFNIAEVTLLSSK 42 (347)
T ss_pred CCEEEEEeCCCHHHHHHHHHHHH----CCCCCcccEEEEECc
Confidence 35799999999999999999984 46666 5555543
No 382
>PRK11199 tyrA bifunctional chorismate mutase/prephenate dehydrogenase; Provisional
Probab=95.20 E-value=0.028 Score=48.53 Aligned_cols=35 Identities=23% Similarity=0.196 Sum_probs=31.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.++|.|+||.|.+|+.+++.|. ..|++|++++|+.
T Consensus 98 ~~~I~IiGG~GlmG~slA~~l~-----~~G~~V~~~d~~~ 132 (374)
T PRK11199 98 LRPVVIVGGKGQLGRLFAKMLT-----LSGYQVRILEQDD 132 (374)
T ss_pred cceEEEEcCCChhhHHHHHHHH-----HCCCeEEEeCCCc
Confidence 3789999999999999999999 6899999999864
No 383
>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit. This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.
Probab=95.17 E-value=0.022 Score=47.42 Aligned_cols=37 Identities=22% Similarity=0.401 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.+++++|+| .|.+|+.+++.|. ..|.+|++.+|++.+
T Consensus 150 ~gk~v~IiG-~G~iG~avA~~L~-----~~G~~V~v~~R~~~~ 186 (287)
T TIGR02853 150 HGSNVMVLG-FGRTGMTIARTFS-----ALGARVFVGARSSAD 186 (287)
T ss_pred CCCEEEEEc-ChHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 368999999 5889999999999 688999999997653
No 384
>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional
Probab=95.14 E-value=0.1 Score=48.10 Aligned_cols=72 Identities=15% Similarity=-0.043 Sum_probs=53.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
.++++|.| .|-+|+.+++.|. ++|+++++++++++... ....+.. ++.+|.+|++.++++ +++. .+.++
T Consensus 400 ~~~vII~G-~Gr~G~~va~~L~-----~~g~~vvvID~d~~~v~~~~~~g~~-v~~GDat~~~~L~~a--gi~~-A~~vv 469 (621)
T PRK03562 400 QPRVIIAG-FGRFGQIVGRLLL-----SSGVKMTVLDHDPDHIETLRKFGMK-VFYGDATRMDLLESA--GAAK-AEVLI 469 (621)
T ss_pred cCcEEEEe-cChHHHHHHHHHH-----hCCCCEEEEECCHHHHHHHHhcCCe-EEEEeCCCHHHHHhc--CCCc-CCEEE
Confidence 46799998 8999999999999 68999999999877432 1235678 999999999876553 3322 45554
Q ss_pred eec
Q 028258 88 WVP 90 (211)
Q Consensus 88 ~~a 90 (211)
.+.
T Consensus 470 v~~ 472 (621)
T PRK03562 470 NAI 472 (621)
T ss_pred EEe
Confidence 443
No 385
>PRK08306 dipicolinate synthase subunit A; Reviewed
Probab=95.07 E-value=0.025 Score=47.28 Aligned_cols=67 Identities=22% Similarity=0.202 Sum_probs=45.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
.+++++|+| .|.+|+.++..|. ..|.+|++++|++.... ....+.+ ++ ..+++.+.+++ .|+|
T Consensus 151 ~g~kvlViG-~G~iG~~~a~~L~-----~~Ga~V~v~~r~~~~~~~~~~~G~~-~~-----~~~~l~~~l~~----aDiV 214 (296)
T PRK08306 151 HGSNVLVLG-FGRTGMTLARTLK-----ALGANVTVGARKSAHLARITEMGLS-PF-----HLSELAEEVGK----IDII 214 (296)
T ss_pred CCCEEEEEC-CcHHHHHHHHHHH-----HCCCEEEEEECCHHHHHHHHHcCCe-ee-----cHHHHHHHhCC----CCEE
Confidence 368999999 5889999999999 68899999999865321 1112333 32 22344455554 5788
Q ss_pred Eeec
Q 028258 87 FWVP 90 (211)
Q Consensus 87 ~~~a 90 (211)
|+++
T Consensus 215 I~t~ 218 (296)
T PRK08306 215 FNTI 218 (296)
T ss_pred EECC
Confidence 8764
No 386
>cd00300 LDH_like L-lactate dehydrogenase-like enzymes. Members of this subfamily are tetrameric NAD-dependent 2-hydroxycarboxylate dehydrogenases including LDHs, L-2-hydroxyisocaproate dehydrogenases (L-HicDH), and LDH-like malate dehydrogenases (MDH). Dehydrogenases catalyze the conversion of carbonyl compounds to alcohols or amino acids. LDHs catalyze the last step of glycolysis in which pyruvate is converted to L-lactate. Vertebrate LDHs are non-allosteric, but some bacterial LDHs are activated by an allosteric effector such as fructose-1,6-bisphosphate. L-HicDH catalyzes the conversion of a variety of 2-oxo carboxylic acids with medium-sized aliphatic or aromatic side chains. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like subfamily is part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of prot
Probab=95.05 E-value=0.04 Score=46.08 Aligned_cols=90 Identities=18% Similarity=0.061 Sum_probs=59.0
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CC-----CCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FP-----TALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~-----~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.|+|+ |.+|+.++..|+ ..| .++++++++++... +. ....+ .... .| .+.+++
T Consensus 1 i~iiGa-G~VG~~~a~~l~-----~~~~~~el~l~D~~~~~~~g~~~DL~~~~~~~~~~~-i~~~--~~----~~~l~~- 66 (300)
T cd00300 1 ITIIGA-GNVGAAVAFALI-----AKGLASELVLVDVNEEKAKGDALDLSHASAFLATGT-IVRG--GD----YADAAD- 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-----hcCCCCEEEEEeCCccHHHHHHHhHHHhccccCCCe-EEEC--CC----HHHhCC-
Confidence 468885 889999999998 456 67999998765421 00 01112 1111 12 123554
Q ss_pred ccccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+. .+..+....|....+.+.+.++++
T Consensus 67 ---aDiVIitag~p~~~~~~R~~l~~~n~~i~~~~~~~i~~~ 105 (300)
T cd00300 67 ---ADIVVITAGAPRKPGETRLDLINRNAPILRSVITNLKKY 105 (300)
T ss_pred ---CCEEEEcCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578888887643 245566788999999999999887
No 387
>TIGR00518 alaDH alanine dehydrogenase. The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.
Probab=94.97 E-value=0.049 Score=46.97 Aligned_cols=74 Identities=16% Similarity=-0.054 Sum_probs=50.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCC-ceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTAL-VDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~-~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
..++++|+|+ |-+|+..++.|. ..|.+|++++|++.+....... -. .+..+..+++.+.+.+++ .|+|
T Consensus 166 ~~~~VlViGa-G~vG~~aa~~a~-----~lGa~V~v~d~~~~~~~~l~~~~g~-~v~~~~~~~~~l~~~l~~----aDvV 234 (370)
T TIGR00518 166 EPGDVTIIGG-GVVGTNAAKMAN-----GLGATVTILDINIDRLRQLDAEFGG-RIHTRYSNAYEIEDAVKR----ADLL 234 (370)
T ss_pred CCceEEEEcC-CHHHHHHHHHHH-----HCCCeEEEEECCHHHHHHHHHhcCc-eeEeccCCHHHHHHHHcc----CCEE
Confidence 3467999985 999999999999 6788999999876532100011 12 334456667777777765 5788
Q ss_pred Eeeccc
Q 028258 87 FWVPLQ 92 (211)
Q Consensus 87 ~~~a~~ 92 (211)
|.++..
T Consensus 235 I~a~~~ 240 (370)
T TIGR00518 235 IGAVLI 240 (370)
T ss_pred EEcccc
Confidence 877643
No 388
>PRK10537 voltage-gated potassium channel; Provisional
Probab=94.91 E-value=0.08 Score=46.02 Aligned_cols=59 Identities=15% Similarity=-0.047 Sum_probs=45.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHH
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
+.+++|.| .|-+|+.++++|. ++|++|++++.+.... ....+.. ++.+|.+|++.++++
T Consensus 240 k~HvII~G-~g~lg~~v~~~L~-----~~g~~vvVId~d~~~~-~~~~g~~-vI~GD~td~e~L~~A 298 (393)
T PRK10537 240 KDHFIICG-HSPLAINTYLGLR-----QRGQAVTVIVPLGLEH-RLPDDAD-LIPGDSSDSAVLKKA 298 (393)
T ss_pred CCeEEEEC-CChHHHHHHHHHH-----HCCCCEEEEECchhhh-hccCCCc-EEEeCCCCHHHHHhc
Confidence 56899998 7889999999998 6788888887653221 1235678 999999998876654
No 389
>PRK08655 prephenate dehydrogenase; Provisional
Probab=94.87 E-value=0.038 Score=48.73 Aligned_cols=35 Identities=34% Similarity=0.324 Sum_probs=31.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|+|+||+|.+|+++++.|. +.|++|++++|++..
T Consensus 2 kI~IIGG~G~mG~slA~~L~-----~~G~~V~v~~r~~~~ 36 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLK-----EKGFEVIVTGRDPKK 36 (437)
T ss_pred EEEEEecCCHHHHHHHHHHH-----HCCCEEEEEECChHH
Confidence 68999999999999999999 688999999997653
No 390
>KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism]
Probab=94.81 E-value=0.27 Score=37.43 Aligned_cols=36 Identities=17% Similarity=0.197 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+++|-|+-|-+|+++++.+. +.+|-|.-++-...
T Consensus 3 agrVivYGGkGALGSacv~~Fk-----annywV~siDl~eN 38 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFK-----ANNYWVLSIDLSEN 38 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHH-----hcCeEEEEEeeccc
Confidence 4689999999999999999999 78999888776544
No 391
>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=94.80 E-value=0.046 Score=46.15 Aligned_cols=38 Identities=26% Similarity=0.242 Sum_probs=32.4
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|+++| +|.|+| +|-+|+.++..|+ ..|++|++++|++.
T Consensus 1 ~~~~m--~I~iIG-~G~mG~~ia~~L~-----~~G~~V~~~~r~~~ 38 (328)
T PRK14618 1 MHHGM--RVAVLG-AGAWGTALAVLAA-----SKGVPVRLWARRPE 38 (328)
T ss_pred CCCCC--eEEEEC-cCHHHHHHHHHHH-----HCCCeEEEEeCCHH
Confidence 56655 588887 8999999999999 68999999999754
No 392
>COG0002 ArgC Acetylglutamate semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=94.80 E-value=0.043 Score=46.45 Aligned_cols=36 Identities=22% Similarity=0.263 Sum_probs=29.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+.+|.|.||||+.|..|++.|.+ ....+++..+.+.
T Consensus 2 ~~kV~IvGasGYtG~EL~rlL~~----Hp~ve~~~~ss~~ 37 (349)
T COG0002 2 MIKVGIVGASGYTGLELLRLLAG----HPDVELILISSRE 37 (349)
T ss_pred CceEEEEcCCCCcHHHHHHHHhc----CCCeEEEEeechh
Confidence 46799999999999999999996 6677766655443
No 393
>PRK02472 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=94.75 E-value=0.048 Score=47.94 Aligned_cols=36 Identities=22% Similarity=0.262 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|||++| +|.++++.|+ +.|++|++.+++..
T Consensus 4 ~~k~v~v~G~g~-~G~s~a~~l~-----~~G~~V~~~d~~~~ 39 (447)
T PRK02472 4 QNKKVLVLGLAK-SGYAAAKLLH-----KLGANVTVNDGKPF 39 (447)
T ss_pred CCCEEEEEeeCH-HHHHHHHHHH-----HCCCEEEEEcCCCc
Confidence 468899999987 9999999999 79999999987653
No 394
>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed
Probab=94.73 E-value=0.055 Score=44.71 Aligned_cols=37 Identities=16% Similarity=0.073 Sum_probs=31.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~ 50 (211)
..++++|+|+ |.+|++++..|. ..| .+|++++|+..+
T Consensus 122 ~~k~vlVlGa-Gg~a~ai~~aL~-----~~g~~~V~v~~R~~~~ 159 (278)
T PRK00258 122 KGKRILILGA-GGAARAVILPLL-----DLGVAEITIVNRTVER 159 (278)
T ss_pred CCCEEEEEcC-cHHHHHHHHHHH-----HcCCCEEEEEeCCHHH
Confidence 4578999995 999999999999 577 679999998654
No 395
>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase. Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.
Probab=94.72 E-value=0.043 Score=45.93 Aligned_cols=37 Identities=22% Similarity=0.218 Sum_probs=31.6
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 139 g~~VLI~ga~g~vG~~aiqlAk-----~~G~~Vi~~~~s~~~ 175 (325)
T TIGR02825 139 GETVMVNAAAGAVGSVVGQIAK-----LKGCKVVGAAGSDEK 175 (325)
T ss_pred CCEEEEeCCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999988777 688999988887553
No 396
>COG1004 Ugd Predicted UDP-glucose 6-dehydrogenase [Cell envelope biogenesis, outer membrane]
Probab=94.67 E-value=0.1 Score=44.96 Aligned_cols=34 Identities=24% Similarity=0.225 Sum_probs=29.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|+| |||+|.-..--|. +.||+|++++..+.+
T Consensus 2 kI~viG-tGYVGLv~g~~lA-----~~GHeVv~vDid~~K 35 (414)
T COG1004 2 KITVIG-TGYVGLVTGACLA-----ELGHEVVCVDIDESK 35 (414)
T ss_pred ceEEEC-CchHHHHHHHHHH-----HcCCeEEEEeCCHHH
Confidence 578887 9999999999998 799999999987654
No 397
>PRK06129 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=94.58 E-value=0.048 Score=45.69 Aligned_cols=34 Identities=24% Similarity=0.262 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++|++.
T Consensus 3 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~v~d~~~~ 36 (308)
T PRK06129 3 GSVAIIG-AGLIGRAWAIVFA-----RAGHEVRLWDADPA 36 (308)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----HCCCeeEEEeCCHH
Confidence 3699999 9999999999999 68999999999864
No 398
>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac
Probab=94.49 E-value=0.065 Score=44.63 Aligned_cols=37 Identities=22% Similarity=0.238 Sum_probs=31.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 144 g~~vlI~ga~g~vG~~aiqlA~-----~~G~~vi~~~~s~~~ 180 (329)
T cd08294 144 GETVVVNGAAGAVGSLVGQIAK-----IKGCKVIGCAGSDDK 180 (329)
T ss_pred CCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999988887 688999988876653
No 399
>PF02571 CbiJ: Precorrin-6x reductase CbiJ/CobK; InterPro: IPR003723 Cobalamin (vitamin B12) is a structurally complex cofactor, consisting of a modified tetrapyrrole with a centrally chelated cobalt. Cobalamin is usually found in one of two biologically active forms: methylcobalamin and adocobalamin. Most prokaryotes, as well as animals, have cobalamin-dependent enzymes, whereas plants and fungi do not appear to use it. In bacteria and archaea, these include methionine synthase, ribonucleotide reductase, glutamate and methylmalonyl-CoA mutases, ethanolamine ammonia lyase, and diol dehydratase []. In mammals, cobalamin is obtained through the diet, and is required for methionine synthase and methylmalonyl-CoA mutase []. There are at least two distinct cobalamin biosynthetic pathways in bacteria []: Aerobic pathway that requires oxygen and in which cobalt is inserted late in the pathway []; found in Pseudomonas denitrificans and Rhodobacter capsulatus. Anaerobic pathway in which cobalt insertion is the first committed step towards cobalamin synthesis []; found in Salmonella typhimurium, Bacillus megaterium, and Propionibacterium freudenreichii subsp. shermanii. Either pathway can be divided into two parts: (1) corrin ring synthesis (differs in aerobic and anaerobic pathways) and (2) adenosylation of corrin ring, attachment of aminopropanol arm, and assembly of the nucleotide loop (common to both pathways) []. There are about 30 enzymes involved in either pathway, where those involved in the aerobic pathway are prefixed Cob and those of the anaerobic pathway Cbi. Several of these enzymes are pathway-specific: CbiD, CbiG, and CbiK are specific to the anaerobic route of S. typhimurium, whereas CobE, CobF, CobG, CobN, CobS, CobT, and CobW are unique to the aerobic pathway of P. denitrificans. This entry represents CobK and CbiJ precorrin-6x reductase (1.3.1.54 from EC). In the aerobic pathway, CobK catalyses the reduction of the macrocycle of precorrin-6X to produce precorrin-6Y; while in the anaerobic pathway CbiJ catalyses the reduction of the macrocycle of cobalt-precorrin-6X into cobalt-precorrin-6Y [, ].; GO: 0016994 precorrin-6A reductase activity, 0009236 cobalamin biosynthetic process, 0055114 oxidation-reduction process
Probab=94.48 E-value=0.77 Score=37.41 Aligned_cols=71 Identities=18% Similarity=-0.006 Sum_probs=49.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC--CC-CCCCCceeEEEeeCCCHHHHHHHHHhcccccceE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP--GW-FPTALVDRYITFDALDPTDTALKLSLISQEITNL 86 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~--~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v 86 (211)
|+|||.|||+- |+.|++.|. +.|+ |+...-.... .. ...+.++ ++.+-+.+.+.+.+.++... ++.|
T Consensus 1 m~ILvlgGTtE-~r~la~~L~-----~~g~-v~~sv~t~~g~~~~~~~~~~~~-v~~G~lg~~~~l~~~l~~~~--i~~v 70 (249)
T PF02571_consen 1 MKILVLGGTTE-GRKLAERLA-----EAGY-VIVSVATSYGGELLKPELPGLE-VRVGRLGDEEGLAEFLRENG--IDAV 70 (249)
T ss_pred CEEEEEechHH-HHHHHHHHH-----hcCC-EEEEEEhhhhHhhhccccCCce-EEECCCCCHHHHHHHHHhCC--CcEE
Confidence 57999999874 899999999 6887 5543322211 11 1224567 77888888888999887765 7777
Q ss_pred Eeec
Q 028258 87 FWVP 90 (211)
Q Consensus 87 ~~~a 90 (211)
|..+
T Consensus 71 IDAT 74 (249)
T PF02571_consen 71 IDAT 74 (249)
T ss_pred EECC
Confidence 7654
No 400
>TIGR00978 asd_EA aspartate-semialdehyde dehydrogenase (non-peptidoglycan organisms). Two closely related families of aspartate-semialdehyde dehydrogenase are found. They differ by a deep split in phylogenetic and percent identity trees and in gap patterns. Separate models are built for the two types in order to exclude the USG-1 protein, found in several species, which is specifically related to the Bacillus subtilis type of aspartate-semialdehyde dehydrogenase. Members of this type are found primarily in organisms that lack peptidoglycan.
Probab=94.47 E-value=0.06 Score=45.88 Aligned_cols=31 Identities=16% Similarity=0.339 Sum_probs=25.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA 45 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~ 45 (211)
+|.|+||||++|++|++.|.+ ....+|..+.
T Consensus 2 kVaIvGatG~~G~~L~~~l~~----~~~~~l~~v~ 32 (341)
T TIGR00978 2 RVAVLGATGLVGQKFVKLLAK----HPYFELAKVV 32 (341)
T ss_pred EEEEECCCCHHHHHHHHHHHh----CCCceEEEEE
Confidence 689999999999999999884 3446877773
No 401
>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase. Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc
Probab=94.43 E-value=0.083 Score=41.51 Aligned_cols=37 Identities=24% Similarity=0.178 Sum_probs=31.8
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..+|+++|+|. |.+|+++++.|. +.|++|++.++++.
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~-----~~G~~Vvv~D~~~~ 62 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLL-----EEGAKLIVADINEE 62 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 34689999995 799999999999 68999999888754
No 402
>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase. NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a
Probab=94.39 E-value=0.086 Score=40.31 Aligned_cols=35 Identities=20% Similarity=0.225 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|+++|+|+++.+|..+++.|. +.|.+|+.+.|+
T Consensus 43 ~gk~vlViG~G~~~G~~~a~~L~-----~~g~~V~v~~r~ 77 (168)
T cd01080 43 AGKKVVVVGRSNIVGKPLAALLL-----NRNATVTVCHSK 77 (168)
T ss_pred CCCEEEEECCcHHHHHHHHHHHh-----hCCCEEEEEECC
Confidence 46899999987778999999999 688888888875
No 403
>KOG0172 consensus Lysine-ketoglutarate reductase/saccharopine dehydrogenase [Amino acid transport and metabolism]
Probab=94.37 E-value=0.063 Score=46.09 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=51.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC--CCCCCceeEEEeeCCCHH-HHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW--FPTALVDRYITFDALDPT-DTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~--~~~~~~~~~i~~Dl~d~~-~~~~~~~~~~ 80 (211)
+++.||+.| +||+.+-++..|.+ ....+|++..|...... ....+++ .+..|+.+++ .+.+.++.++
T Consensus 1 ~~~~vlllg-sg~v~~p~~d~ls~----~~dv~vtva~~~~~~~~~~~~~~~~~-av~ldv~~~~~~L~~~v~~~D 70 (445)
T KOG0172|consen 1 TKKGVLLLG-SGFVSRPVADFLSR----KKDVNVTVASRTLKDAEALVKGINIK-AVSLDVADEELALRKEVKPLD 70 (445)
T ss_pred CCcceEEec-CccccchHHHHHhh----cCCceEEEehhhHHHHHHHhcCCCcc-ceEEEccchHHHHHhhhcccc
Confidence 357899998 99999999999995 66778888877554321 1345688 9999999998 6777777654
No 404
>PRK07530 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=94.36 E-value=0.061 Score=44.62 Aligned_cols=38 Identities=16% Similarity=0.091 Sum_probs=32.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
|+-++|.|+| .|.+|..++..|+ ..|++|++++|+++.
T Consensus 2 ~~~~kI~vIG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~~ 39 (292)
T PRK07530 2 MAIKKVGVIG-AGQMGNGIAHVCA-----LAGYDVLLNDVSADR 39 (292)
T ss_pred CCCCEEEEEC-CcHHHHHHHHHHH-----HCCCeEEEEeCCHHH
Confidence 3447799998 6999999999999 689999999997653
No 405
>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional
Probab=94.31 E-value=0.23 Score=41.84 Aligned_cols=36 Identities=19% Similarity=0.244 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..|++.|.| .|-||+.+++.|. .-|++|++++|...
T Consensus 135 ~g~tvgIvG-~G~IG~~vA~~l~-----afG~~V~~~~~~~~ 170 (312)
T PRK15469 135 EDFTIGILG-AGVLGSKVAQSLQ-----TWGFPLRCWSRSRK 170 (312)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 468999998 9999999999999 78999999998654
No 406
>TIGR01771 L-LDH-NAD L-lactate dehydrogenase. This model represents the NAD-dependent L-lactate dehydrogenases from bacteria and eukaryotes. This enzyme function as as the final step in anaerobic glycolysis. Although lactate dehydrogenases have in some cases been mistaken for malate dehydrogenases due to the similarity of these two substrates and the apparent ease with which evolution can toggle these activities, critical residues have been identified which can discriminate between the two activities. At the time of the creation of this model no hits above the trusted cutoff contained critical residues typical of malate dehydrogenases.
Probab=94.28 E-value=0.32 Score=40.69 Aligned_cols=87 Identities=20% Similarity=0.059 Sum_probs=56.8
Q ss_pred EEcCCChHHHHHHHHhhCCCCCCCC--cEEEEEeCCCCCCC-----CC------CCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 14 IIGVTGISGLSLAEALKNPTTPGSP--WKVYGAARRPPPGW-----FP------TALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 14 VtGatG~iG~~l~~~L~~~~~~~~g--~~V~~~~R~~~~~~-----~~------~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
|+| .|.||++++..|+. .+ -++..++++..... +. ...++ +. ..|. +.+++
T Consensus 1 iIG-aG~VG~~~a~~l~~-----~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~-i~---~~~~----~~~~d-- 64 (299)
T TIGR01771 1 IIG-AGNVGSSTAFALLN-----QGIADEIVLIDINKDKAEGEAMDLQHAASFLPTPKK-IR---SGDY----SDCKD-- 64 (299)
T ss_pred CCC-cCHHHHHHHHHHHh-----cCCCCEEEEEeCCCChhhHHHHHHHHhhcccCCCeE-Ee---cCCH----HHHCC--
Confidence 456 59999999999983 33 25888898665321 01 11222 22 1222 23554
Q ss_pred cccceEEeecccCC---chhHHHHhhcHHHHHHHHHHHHhc
Q 028258 81 QEITNLFWVPLQVQ---ESEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 81 ~~~~~v~~~a~~~~---~~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.|+.+++.+. .+..+....|....+.+.+.+.++
T Consensus 65 --aDivVitag~~rk~g~~R~dll~~N~~i~~~~~~~i~~~ 103 (299)
T TIGR01771 65 --ADLVVITAGAPQKPGETRLELVGRNVRIMKSIVPEVVKS 103 (299)
T ss_pred --CCEEEECCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHh
Confidence 578888888743 245567888999999999999887
No 407
>PRK13982 bifunctional SbtC-like/phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Provisional
Probab=94.25 E-value=0.39 Score=42.77 Aligned_cols=77 Identities=12% Similarity=-0.004 Sum_probs=52.3
Q ss_pred CCCCeEEEEc----------------CCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHH
Q 028258 7 NPKSVALIIG----------------VTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPT 70 (211)
Q Consensus 7 ~~~~~ilVtG----------------atG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~ 70 (211)
..+|+||||+ .||..|.+|++++. ..|.+|+.+.-.-. .. ...+++ ++.. ....
T Consensus 254 l~gkkvLITaGpT~E~IDpVR~ItN~SSGkmG~alA~aa~-----~~GA~VtlI~Gp~~-~~-~p~~v~-~i~V--~ta~ 323 (475)
T PRK13982 254 LAGRRVLITAGPTHEPIDPVRYIANRSSGKQGFAIAAAAA-----AAGAEVTLISGPVD-LA-DPQGVK-VIHV--ESAR 323 (475)
T ss_pred cCCCEEEEecCCccccCCcceeeCCCCchHHHHHHHHHHH-----HCCCcEEEEeCCcC-CC-CCCCce-EEEe--cCHH
Confidence 4678999998 48999999999999 79999998863222 11 124566 5554 3444
Q ss_pred HHHHHHHhcccccceEEeecccCC
Q 028258 71 DTALKLSLISQEITNLFWVPLQVQ 94 (211)
Q Consensus 71 ~~~~~~~~~~~~~~~v~~~a~~~~ 94 (211)
+..+++...-. .|.+|++|+..+
T Consensus 324 eM~~av~~~~~-~Di~I~aAAVaD 346 (475)
T PRK13982 324 QMLAAVEAALP-ADIAIFAAAVAD 346 (475)
T ss_pred HHHHHHHhhCC-CCEEEEeccccc
Confidence 45555544322 688998887644
No 408
>PLN02735 carbamoyl-phosphate synthase
Probab=94.22 E-value=0.3 Score=48.07 Aligned_cols=73 Identities=16% Similarity=0.124 Sum_probs=47.9
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|||+|+... | |..+++.|. +.||+|++++.++........-.. ....+..+.+.+.+.++.
T Consensus 23 ~kkVLiiGsG~~~igqa~e~d~SG~q~~kaLk-----e~G~~Vi~vd~np~t~~~~~~~aD-~~yi~p~~~e~v~~ii~~ 96 (1102)
T PLN02735 23 LKKIMILGAGPIVIGQACEFDYSGTQACKALK-----EEGYEVVLINSNPATIMTDPETAD-RTYIAPMTPELVEQVIAK 96 (1102)
T ss_pred CCEEEEECCCccccccceeecchHHHHHHHHH-----HcCCEEEEEeCCcccccCChhhCc-EEEeCCCCHHHHHHHHHH
Confidence 478999995542 3 788999999 799999999987743211111122 223444567777776666
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 97 e~--~D~Iip~ 105 (1102)
T PLN02735 97 ER--PDALLPT 105 (1102)
T ss_pred hC--CCEEEEC
Confidence 54 7888754
No 409
>PRK08818 prephenate dehydrogenase; Provisional
Probab=94.22 E-value=0.091 Score=45.30 Aligned_cols=35 Identities=29% Similarity=0.340 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
+++|.|+|.+|.||+.+++.|.+ ..+++|++++|.
T Consensus 4 ~~~I~IIGl~GliGgslA~alk~----~~~~~V~g~D~~ 38 (370)
T PRK08818 4 QPVVGIVGSAGAYGRWLARFLRT----RMQLEVIGHDPA 38 (370)
T ss_pred CCEEEEECCCCHHHHHHHHHHHh----cCCCEEEEEcCC
Confidence 57899999999999999999994 348899999885
No 410
>COG0289 DapB Dihydrodipicolinate reductase [Amino acid transport and metabolism]
Probab=94.18 E-value=0.43 Score=39.03 Aligned_cols=36 Identities=17% Similarity=0.216 Sum_probs=29.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE-EEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVY-GAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~-~~~R~~~ 49 (211)
.+|.|.||+|-.|+.+++.+.+ ..+.++. +++|.+.
T Consensus 3 iki~V~Ga~GRMG~~ii~~v~~----~~~~~L~aa~~~~~~ 39 (266)
T COG0289 3 IKVAVAGASGRMGRTLIRAVLE----APDLELVAAFDRPGS 39 (266)
T ss_pred ceEEEEcCCChHHHHHHHHHhc----CCCceEEEEEecCCc
Confidence 4599999999999999999996 5677744 5677654
No 411
>PRK07236 hypothetical protein; Provisional
Probab=94.18 E-value=0.098 Score=45.04 Aligned_cols=40 Identities=28% Similarity=0.403 Sum_probs=33.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|..|+..+|+|.| .|..|..++..|. ..|++|+++.|++.
T Consensus 1 ~~~~~~~~ViIVG-aG~aGl~~A~~L~-----~~G~~v~v~E~~~~ 40 (386)
T PRK07236 1 MTHMSGPRAVVIG-GSLGGLFAALLLR-----RAGWDVDVFERSPT 40 (386)
T ss_pred CCCCCCCeEEEEC-CCHHHHHHHHHHH-----hCCCCEEEEecCCC
Confidence 4456668899998 6999999999999 68999999998764
No 412
>PF00070 Pyr_redox: Pyridine nucleotide-disulphide oxidoreductase; InterPro: IPR001327 FAD flavoproteins belonging to the family of pyridine nucleotide-disulphide oxidoreductases (glutathione reductase, trypanothione reductase, lipoamide dehydrogenase, mercuric reductase, thioredoxin reductase, alkyl hydroperoxide reductase) share sequence similarity with a number of other flavoprotein oxidoreductases, in particular with ferredoxin-NAD+ reductases involved in oxidative metabolism of a variety of hydrocarbons (rubredoxin reductase, putidaredoxin reductase, terpredoxin reductase, ferredoxin-NAD+ reductase components of benzene 1,2-dioxygenase, toluene 1,2-dioxygenase, chlorobenzene dioxygenase, biphenyl dioxygenase), NADH oxidase and NADH peroxidase [, , ]. Comparison of the crystal structures of human glutathione reductase and Escherichia coli thioredoxin reductase reveals different locations of their active sites, suggesting that the enzymes diverged from an ancestral FAD/NAD(P)H reductase and acquired their disulphide reductase activities independently []. Despite functional similarities, oxidoreductases of this family show no sequence similarity with adrenodoxin reductases [] and flavoprotein pyridine nucleotide cytochrome reductases (FPNCR) []. Assuming that disulphide reductase activity emerged later, during divergent evolution, the family can be referred to as FAD-dependent pyridine nucleotide reductases, FADPNR. To date, 3D structures of glutathione reductase [], thioredoxin reductase [], mercuric reductase [], lipoamide dehydrogenase [], trypanothione reductase [] and NADH peroxidase [] have been solved. The enzymes share similar tertiary structures based on a doubly-wound alpha/beta fold, but the relative orientations of their FAD- and NAD(P)H-binding domains may vary significantly. By contrast with the FPNCR family, the folds of the FAD- and NAD(P)H-binding domains are similar, suggesting that the domains evolved by gene duplication []. This entry describes a small NADH binding domain within a larger FAD binding domain described by IPR023753 from INTERPRO. It is found in both class I and class II oxidoreductases. ; GO: 0016491 oxidoreductase activity, 0050660 flavin adenine dinucleotide binding, 0055114 oxidation-reduction process; PDB: 1ZKQ_A 3DGZ_A 1ZDL_A 2R9Z_B 2RAB_A 2A87_B 1M6I_A 2YVG_A 2GR1_A 2GQW_A ....
Probab=94.14 E-value=0.13 Score=33.92 Aligned_cols=34 Identities=32% Similarity=0.335 Sum_probs=29.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+++|.| +|++|-.++..|. +.|.+|+.+.|++..
T Consensus 1 ~vvViG-gG~ig~E~A~~l~-----~~g~~vtli~~~~~~ 34 (80)
T PF00070_consen 1 RVVVIG-GGFIGIELAEALA-----ELGKEVTLIERSDRL 34 (80)
T ss_dssp EEEEES-SSHHHHHHHHHHH-----HTTSEEEEEESSSSS
T ss_pred CEEEEC-cCHHHHHHHHHHH-----HhCcEEEEEeccchh
Confidence 467887 8999999999999 688999999998663
No 413
>PRK08229 2-dehydropantoate 2-reductase; Provisional
Probab=94.07 E-value=0.082 Score=44.74 Aligned_cols=33 Identities=21% Similarity=0.201 Sum_probs=29.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
++|.|+| +|.+|+.++..|. ..|++|++++|++
T Consensus 3 mkI~IiG-~G~mG~~~A~~L~-----~~G~~V~~~~r~~ 35 (341)
T PRK08229 3 ARICVLG-AGSIGCYLGGRLA-----AAGADVTLIGRAR 35 (341)
T ss_pred ceEEEEC-CCHHHHHHHHHHH-----hcCCcEEEEecHH
Confidence 4689997 9999999999999 6899999999864
No 414
>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase. Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann
Probab=94.07 E-value=0.096 Score=38.86 Aligned_cols=36 Identities=25% Similarity=0.191 Sum_probs=30.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~ 50 (211)
.++++|+|+ |.+|+.+++.|. .. +++|++++|++.+
T Consensus 19 ~~~i~iiG~-G~~g~~~a~~l~-----~~g~~~v~v~~r~~~~ 55 (155)
T cd01065 19 GKKVLILGA-GGAARAVAYALA-----ELGAAKIVIVNRTLEK 55 (155)
T ss_pred CCEEEEECC-cHHHHHHHHHHH-----HCCCCEEEEEcCCHHH
Confidence 578999996 999999999999 45 4789999987653
No 415
>TIGR00507 aroE shikimate 5-dehydrogenase. This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.
Probab=94.07 E-value=0.087 Score=43.28 Aligned_cols=36 Identities=28% Similarity=0.241 Sum_probs=31.1
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.|+++|+|+ |.+|++++..|+ ..|++|++++|++.+
T Consensus 117 ~k~vliiGa-Gg~g~aia~~L~-----~~g~~v~v~~R~~~~ 152 (270)
T TIGR00507 117 NQRVLIIGA-GGAARAVALPLL-----KADCNVIIANRTVSK 152 (270)
T ss_pred CCEEEEEcC-cHHHHHHHHHHH-----HCCCEEEEEeCCHHH
Confidence 578999997 899999999999 578899999987653
No 416
>PRK06249 2-dehydropantoate 2-reductase; Provisional
Probab=94.06 E-value=0.11 Score=43.72 Aligned_cols=34 Identities=26% Similarity=0.139 Sum_probs=30.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|+|.| .|-||+.++..|. +.|++|+++.|++.
T Consensus 6 m~I~IiG-~GaiG~~lA~~L~-----~~g~~V~~~~r~~~ 39 (313)
T PRK06249 6 PRIGIIG-TGAIGGFYGAMLA-----RAGFDVHFLLRSDY 39 (313)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCCH
Confidence 5699997 8999999999999 68999999999753
No 417
>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related. All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....
Probab=94.06 E-value=0.1 Score=40.06 Aligned_cols=37 Identities=35% Similarity=0.445 Sum_probs=32.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
.++++.|+| .|-||+++++.|. .-|.+|++++|....
T Consensus 35 ~g~tvgIiG-~G~IG~~vA~~l~-----~fG~~V~~~d~~~~~ 71 (178)
T PF02826_consen 35 RGKTVGIIG-YGRIGRAVARRLK-----AFGMRVIGYDRSPKP 71 (178)
T ss_dssp TTSEEEEES-TSHHHHHHHHHHH-----HTT-EEEEEESSCHH
T ss_pred CCCEEEEEE-EcCCcCeEeeeee-----cCCceeEEecccCCh
Confidence 478999998 8999999999999 799999999998663
No 418
>TIGR01745 asd_gamma aspartate-semialdehyde dehydrogenase, gamma-proteobacterial.
Probab=94.03 E-value=0.17 Score=43.47 Aligned_cols=27 Identities=15% Similarity=0.334 Sum_probs=22.2
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWK 40 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~ 40 (211)
++|.|.||||.+|+.+++.|.. +..+.
T Consensus 1 ~~VavvGATG~VG~~ll~~L~~----e~~fp 27 (366)
T TIGR01745 1 KNVGLVGWRGMVGSVLMQRMQE----ERDFD 27 (366)
T ss_pred CeEEEEcCcCHHHHHHHHHHHh----CCCCc
Confidence 4688999999999999999983 35554
No 419
>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins. This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.
Probab=94.02 E-value=0.084 Score=38.45 Aligned_cols=83 Identities=22% Similarity=0.217 Sum_probs=43.6
Q ss_pred cCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CCCCC-----CC--------C--CCCCceeEEEeeCCC
Q 028258 5 DQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RRPPP-----GW--------F--PTALVDRYITFDALD 68 (211)
Q Consensus 5 ~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~~~~-----~~--------~--~~~~~~~~i~~Dl~d 68 (211)
.+..+.+|-|+| +|-+|.+|.+.|. +.||+|.++. |++.+ .. . .....+ .+-+-+.|
T Consensus 6 ~~~~~l~I~iIG-aGrVG~~La~aL~-----~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~~~~~aD-lv~iavpD 78 (127)
T PF10727_consen 6 TQAARLKIGIIG-AGRVGTALARALA-----RAGHEVVGVYSRSPASAERAAAFIGAGAILDLEEILRDAD-LVFIAVPD 78 (127)
T ss_dssp ------EEEEEC-TSCCCCHHHHHHH-----HTTSEEEEESSCHH-HHHHHHC--TT-----TTGGGCC-S-EEEE-S-C
T ss_pred cCCCccEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEEeCCcccccccccccccccccccccccccCC-EEEEEech
Confidence 355567899999 5999999999999 6899998874 44321 00 0 013445 55565656
Q ss_pred H--HHHHHHHHhc--ccccceEEeecccCC
Q 028258 69 P--TDTALKLSLI--SQEITNLFWVPLQVQ 94 (211)
Q Consensus 69 ~--~~~~~~~~~~--~~~~~~v~~~a~~~~ 94 (211)
. +.+.+.+... ..+=..|+||.+...
T Consensus 79 daI~~va~~La~~~~~~~g~iVvHtSGa~~ 108 (127)
T PF10727_consen 79 DAIAEVAEQLAQYGAWRPGQIVVHTSGALG 108 (127)
T ss_dssp CHHHHHHHHHHCC--S-TT-EEEES-SS--
T ss_pred HHHHHHHHHHHHhccCCCCcEEEECCCCCh
Confidence 4 2344444432 000246899998754
No 420
>PLN02928 oxidoreductase family protein
Probab=93.97 E-value=0.2 Score=42.83 Aligned_cols=35 Identities=26% Similarity=0.311 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++++|+.
T Consensus 158 ~gktvGIiG-~G~IG~~vA~~l~-----afG~~V~~~dr~~ 192 (347)
T PLN02928 158 FGKTVFILG-YGAIGIELAKRLR-----PFGVKLLATRRSW 192 (347)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh-----hCCCEEEEECCCC
Confidence 468999998 8999999999999 7899999998864
No 421
>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase
Probab=93.95 E-value=0.097 Score=47.32 Aligned_cols=36 Identities=28% Similarity=0.252 Sum_probs=31.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|+++|+|| |.+|++++..|. +.|++|++++|+.+
T Consensus 378 ~~k~vlIlGa-GGagrAia~~L~-----~~G~~V~i~nR~~e 413 (529)
T PLN02520 378 AGKLFVVIGA-GGAGKALAYGAK-----EKGARVVIANRTYE 413 (529)
T ss_pred CCCEEEEECC-cHHHHHHHHHHH-----HCCCEEEEEcCCHH
Confidence 4688999997 899999999999 68889999988654
No 422
>COG0136 Asd Aspartate-semialdehyde dehydrogenase [Amino acid transport and metabolism]
Probab=93.95 E-value=0.074 Score=44.91 Aligned_cols=22 Identities=32% Similarity=0.453 Sum_probs=20.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhC
Q 028258 10 SVALIIGVTGISGLSLAEALKN 31 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~ 31 (211)
++|.|.||||.+|+.+++.|.+
T Consensus 2 ~~VavvGATG~VG~~~~~~L~e 23 (334)
T COG0136 2 LNVAVLGATGAVGQVLLELLEE 23 (334)
T ss_pred cEEEEEeccchHHHHHHHHHHh
Confidence 6799999999999999999983
No 423
>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family. This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone
Probab=93.88 E-value=0.14 Score=42.50 Aligned_cols=77 Identities=14% Similarity=-0.043 Sum_probs=48.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+++++|+|+++.+|..+++.+. ..|++|+.+++++.... ....+.. . ..|..+.+.......... ..+|.
T Consensus 166 ~~~~vlI~g~~~~iG~~~~~~~~-----~~g~~v~~~~~~~~~~~~~~~~~~~-~-~~~~~~~~~~~~~~~~~~~~~~d~ 238 (342)
T cd08266 166 PGETVLVHGAGSGVGSAAIQIAK-----LFGATVIATAGSEDKLERAKELGAD-Y-VIDYRKEDFVREVRELTGKRGVDV 238 (342)
T ss_pred CCCEEEEECCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-e-EEecCChHHHHHHHHHhCCCCCcE
Confidence 35789999999999999999998 68999998888654311 0011112 1 235555443333322211 12788
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++++++
T Consensus 239 ~i~~~g 244 (342)
T cd08266 239 VVEHVG 244 (342)
T ss_pred EEECCc
Confidence 888875
No 424
>COG0287 TyrA Prephenate dehydrogenase [Amino acid transport and metabolism]
Probab=93.83 E-value=0.093 Score=43.49 Aligned_cols=35 Identities=34% Similarity=0.296 Sum_probs=28.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++|+|.| .|.||+.+++.|. +.|+.|.++.++..
T Consensus 3 ~~~v~IvG-~GliG~s~a~~l~-----~~g~~v~i~g~d~~ 37 (279)
T COG0287 3 SMKVGIVG-LGLMGGSLARALK-----EAGLVVRIIGRDRS 37 (279)
T ss_pred CcEEEEEC-CchHHHHHHHHHH-----HcCCeEEEEeecCc
Confidence 45677766 9999999999999 79999877777654
No 425
>PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1.1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B ....
Probab=93.82 E-value=0.076 Score=41.01 Aligned_cols=34 Identities=24% Similarity=0.357 Sum_probs=28.4
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+|.|.|| |.+|+.++..++ ..|++|+.++++++.
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 34 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFA-----RAGYEVTLYDRSPEA 34 (180)
T ss_dssp EEEEES--SHHHHHHHHHHH-----HTTSEEEEE-SSHHH
T ss_pred CEEEEcC-CHHHHHHHHHHH-----hCCCcEEEEECChHH
Confidence 5889995 999999999999 689999999987653
No 426
>PLN00203 glutamyl-tRNA reductase
Probab=93.81 E-value=0.058 Score=48.53 Aligned_cols=36 Identities=25% Similarity=0.280 Sum_probs=30.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.++|+|+|+ |.+|+.+++.|. ..|. +|+++.|+..+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~-----~~G~~~V~V~nRs~er 302 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLV-----SKGCTKMVVVNRSEER 302 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHH-----hCCCCeEEEEeCCHHH
Confidence 588999996 999999999999 5776 59999998654
No 427
>TIGR01035 hemA glutamyl-tRNA reductase. This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.
Probab=93.80 E-value=0.071 Score=46.73 Aligned_cols=70 Identities=19% Similarity=0.016 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCC-cEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSP-WKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEIT 84 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g-~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~ 84 (211)
..++++|+|+ |.+|+.+++.|. ..| .+|++++|+..+.. + ..-+.. .+ +.+++.+.+.+ .|
T Consensus 179 ~~~~VlViGa-G~iG~~~a~~L~-----~~G~~~V~v~~rs~~ra~~la~~~g~~-~i-----~~~~l~~~l~~----aD 242 (417)
T TIGR01035 179 KGKKALLIGA-GEMGELVAKHLL-----RKGVGKILIANRTYERAEDLAKELGGE-AV-----KFEDLEEYLAE----AD 242 (417)
T ss_pred cCCEEEEECC-hHHHHHHHHHHH-----HCCCCEEEEEeCCHHHHHHHHHHcCCe-Ee-----eHHHHHHHHhh----CC
Confidence 4578999995 999999999999 577 67999999765421 0 001112 22 22345555554 57
Q ss_pred eEEeecccC
Q 028258 85 NLFWVPLQV 93 (211)
Q Consensus 85 ~v~~~a~~~ 93 (211)
+||.+.+..
T Consensus 243 vVi~aT~s~ 251 (417)
T TIGR01035 243 IVISSTGAP 251 (417)
T ss_pred EEEECCCCC
Confidence 777776543
No 428
>PRK06130 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.74 E-value=0.12 Score=43.26 Aligned_cols=36 Identities=19% Similarity=0.126 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
-++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 4 ~~~I~vIG-aG~mG~~iA~~l~-----~~g~~V~~~d~~~~~ 39 (311)
T PRK06130 4 IQNLAIIG-AGTMGSGIAALFA-----RKGLQVVLIDVMEGA 39 (311)
T ss_pred ccEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEEECCHHH
Confidence 36799998 6999999999999 689999999987643
No 429
>PRK11064 wecC UDP-N-acetyl-D-mannosamine dehydrogenase; Provisional
Probab=93.71 E-value=0.093 Score=45.96 Aligned_cols=35 Identities=26% Similarity=0.324 Sum_probs=31.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|++|..++..|+ +.||+|+++++++.+
T Consensus 4 ~kI~VIG-lG~~G~~~A~~La-----~~G~~V~~~D~~~~~ 38 (415)
T PRK11064 4 ETISVIG-LGYIGLPTAAAFA-----SRQKQVIGVDINQHA 38 (415)
T ss_pred cEEEEEC-cchhhHHHHHHHH-----hCCCEEEEEeCCHHH
Confidence 5789998 8999999999999 689999999997764
No 430
>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR). Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts
Probab=93.69 E-value=0.11 Score=42.57 Aligned_cols=77 Identities=16% Similarity=0.093 Sum_probs=46.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-CCCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-FPTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
.+++++|+|++|.+|..+++.+. ..|.+|+++++++.... ...-++. .+ +|..+++......+..+ ..+|.
T Consensus 144 ~g~~vlI~g~~~~~g~~~~~~a~-----~~g~~v~~~~~~~~~~~~~~~~g~~-~~-~~~~~~~~~~~~~~~~~~~~~d~ 216 (325)
T cd08253 144 AGETVLVHGGSGAVGHAAVQLAR-----WAGARVIATASSAEGAELVRQAGAD-AV-FNYRAEDLADRILAATAGQGVDV 216 (325)
T ss_pred CCCEEEEEcCCchHHHHHHHHHH-----HcCCEEEEEeCCHHHHHHHHHcCCC-EE-EeCCCcCHHHHHHHHcCCCceEE
Confidence 35789999999999999999888 68899999888654311 0111222 22 34444332222211111 12788
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
++++++
T Consensus 217 vi~~~~ 222 (325)
T cd08253 217 IIEVLA 222 (325)
T ss_pred EEECCc
Confidence 888764
No 431
>TIGR01851 argC_other N-acetyl-gamma-glutamyl-phosphate reductase, uncommon form. This model represents the less common of two related families of N-acetyl-gamma-glutamyl-phosphate reductase, an enzyme catalyzing the third step or Arg biosynthesis from Glu. The two families differ by phylogeny, similarity clustering, and gap architecture in a multiple sequence alignment.
Probab=93.66 E-value=0.13 Score=43.11 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=27.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|.|.||||+.|..|++.|.. ....++..+..+
T Consensus 2 ~~v~IvGasGy~G~el~rlL~~----HP~~el~~l~s~ 35 (310)
T TIGR01851 2 PKVFIDGEAGTTGLQIRERLSG----RDDIELLSIAPD 35 (310)
T ss_pred CeEEEECCCChhHHHHHHHHhC----CCCeEEEEEecc
Confidence 4789999999999999999996 566777666543
No 432
>PRK07502 cyclohexadienyl dehydrogenase; Validated
Probab=93.64 E-value=0.12 Score=43.22 Aligned_cols=37 Identities=30% Similarity=0.393 Sum_probs=30.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc--EEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW--KVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~--~V~~~~R~~~ 49 (211)
++.++|.|+| .|.+|+.++..|. ..|+ +|++++|++.
T Consensus 4 ~~~~~I~IIG-~G~mG~sla~~l~-----~~g~~~~V~~~dr~~~ 42 (307)
T PRK07502 4 PLFDRVALIG-IGLIGSSLARAIR-----RLGLAGEIVGADRSAE 42 (307)
T ss_pred cCCcEEEEEe-eCHHHHHHHHHHH-----hcCCCcEEEEEECCHH
Confidence 3446799998 9999999999999 5664 7999999765
No 433
>PRK13940 glutamyl-tRNA reductase; Provisional
Probab=93.61 E-value=0.051 Score=47.56 Aligned_cols=71 Identities=13% Similarity=0.022 Sum_probs=45.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-C-C-CCCceeEEEeeCCCHHHHHHHHHhccccc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-F-P-TALVDRYITFDALDPTDTALKLSLISQEI 83 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-~-~-~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~ 83 (211)
.+++++|.| +|.+|+.++..|. ..|. +|+++.|+..+.. + . .+... .+ ..+++.+.+.. .
T Consensus 180 ~~kkvlviG-aG~~a~~va~~L~-----~~g~~~I~V~nRt~~ra~~La~~~~~~~-~~-----~~~~l~~~l~~----a 243 (414)
T PRK13940 180 SSKNVLIIG-AGQTGELLFRHVT-----ALAPKQIMLANRTIEKAQKITSAFRNAS-AH-----YLSELPQLIKK----A 243 (414)
T ss_pred cCCEEEEEc-CcHHHHHHHHHHH-----HcCCCEEEEECCCHHHHHHHHHHhcCCe-Ee-----cHHHHHHHhcc----C
Confidence 458899999 5999999999999 5775 5888888765421 0 0 01112 22 22344555554 5
Q ss_pred ceEEeecccCC
Q 028258 84 TNLFWVPLQVQ 94 (211)
Q Consensus 84 ~~v~~~a~~~~ 94 (211)
|.||+|.+.+.
T Consensus 244 DiVI~aT~a~~ 254 (414)
T PRK13940 244 DIIIAAVNVLE 254 (414)
T ss_pred CEEEECcCCCC
Confidence 78888876554
No 434
>smart00859 Semialdhyde_dh Semialdehyde dehydrogenase, NAD binding domain. The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase, an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.
Probab=93.60 E-value=0.14 Score=36.62 Aligned_cols=33 Identities=27% Similarity=0.369 Sum_probs=27.2
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEE-eCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGA-ARR 47 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~-~R~ 47 (211)
++.|+|++|.+|+.+++.|.+ ..++++.++ .|+
T Consensus 1 ki~iiG~~g~~g~~~~~~l~~----~~~~~l~av~~~~ 34 (122)
T smart00859 1 KVAIVGATGYVGQELLRLLAE----HPDFEVVALAASA 34 (122)
T ss_pred CEEEECCCChHHHHHHHHHhc----CCCceEEEEEech
Confidence 478999999999999999994 468888877 444
No 435
>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1.1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....
Probab=93.60 E-value=0.088 Score=39.80 Aligned_cols=62 Identities=19% Similarity=0.143 Sum_probs=41.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C--------C-----CCCceeEEEeeCCCHHHHHHH
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F--------P-----TALVDRYITFDALDPTDTALK 75 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~--------~-----~~~~~~~i~~Dl~d~~~~~~~ 75 (211)
++|.++| .|-+|+.+++.|+ +.||+|++.+|++++.. + . -.+.+ ++-.=+.+.+.+.+.
T Consensus 2 ~~Ig~IG-lG~mG~~~a~~L~-----~~g~~v~~~d~~~~~~~~~~~~g~~~~~s~~e~~~~~d-vvi~~v~~~~~v~~v 74 (163)
T PF03446_consen 2 MKIGFIG-LGNMGSAMARNLA-----KAGYEVTVYDRSPEKAEALAEAGAEVADSPAEAAEQAD-VVILCVPDDDAVEAV 74 (163)
T ss_dssp BEEEEE---SHHHHHHHHHHH-----HTTTEEEEEESSHHHHHHHHHTTEEEESSHHHHHHHBS-EEEE-SSSHHHHHHH
T ss_pred CEEEEEc-hHHHHHHHHHHHH-----hcCCeEEeeccchhhhhhhHHhhhhhhhhhhhHhhccc-ceEeecccchhhhhh
Confidence 5788888 7999999999999 69999999999865310 0 0 02235 555566666666666
Q ss_pred HHh
Q 028258 76 LSL 78 (211)
Q Consensus 76 ~~~ 78 (211)
+.+
T Consensus 75 ~~~ 77 (163)
T PF03446_consen 75 LFG 77 (163)
T ss_dssp HHC
T ss_pred hhh
Confidence 554
No 436
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=93.60 E-value=0.26 Score=35.15 Aligned_cols=34 Identities=21% Similarity=0.417 Sum_probs=25.7
Q ss_pred CeEEEEcCC---ChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVT---GISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGat---G~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
|++.|.|+| +-.|..+++.|. +.||+|+.+.-+.
T Consensus 1 ksiAVvGaS~~~~~~g~~v~~~l~-----~~G~~v~~Vnp~~ 37 (116)
T PF13380_consen 1 KSIAVVGASDNPGKFGYRVLRNLK-----AAGYEVYPVNPKG 37 (116)
T ss_dssp -EEEEET--SSTTSHHHHHHHHHH-----HTT-EEEEESTTC
T ss_pred CEEEEEcccCCCCChHHHHHHHHH-----hCCCEEEEECCCc
Confidence 679999988 778999999999 6899999886544
No 437
>PRK07819 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.55 E-value=0.11 Score=43.04 Aligned_cols=35 Identities=17% Similarity=0.135 Sum_probs=31.0
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 6 ~~V~ViG-aG~mG~~iA~~~a-----~~G~~V~l~d~~~~~ 40 (286)
T PRK07819 6 QRVGVVG-AGQMGAGIAEVCA-----RAGVDVLVFETTEEL 40 (286)
T ss_pred cEEEEEc-ccHHHHHHHHHHH-----hCCCEEEEEECCHHH
Confidence 5789998 5999999999999 689999999998764
No 438
>PRK08591 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=93.53 E-value=0.41 Score=42.22 Aligned_cols=70 Identities=13% Similarity=0.028 Sum_probs=45.0
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEe-------eCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITF-------DALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~-------Dl~d~~~~~~~~~~~ 79 (211)
.|++||.| +|.+|..+++.+. +.|++|+++...+... ...... + .+.. ++.|.+.+.+..+..
T Consensus 2 ~k~iLi~g-~g~~a~~i~~aa~-----~~G~~vv~~~~~~d~~a~~~~~ad-~-~~~~~~~~~~~~y~d~~~l~~~a~~~ 73 (451)
T PRK08591 2 FDKILIAN-RGEIALRIIRACK-----ELGIKTVAVHSTADRDALHVQLAD-E-AVCIGPAPSKKSYLNIPAIISAAEIT 73 (451)
T ss_pred cceEEEEC-CCHHHHHHHHHHH-----HcCCeEEEEcChhhccCCCHhHCC-E-EEEeCCCCcccccCCHHHHHHHHHHh
Confidence 48899997 8999999999999 6999998885543321 110111 2 3322 455666666665554
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
+ +|.|+-
T Consensus 74 ~--id~I~p 80 (451)
T PRK08591 74 G--ADAIHP 80 (451)
T ss_pred C--CCEEEE
Confidence 4 677653
No 439
>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.49 E-value=0.15 Score=42.42 Aligned_cols=34 Identities=21% Similarity=0.189 Sum_probs=30.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.+|+++|.|++|.+|+.++..|+ ..|..|+++.|
T Consensus 158 ~Gk~vvViG~gg~vGkpia~~L~-----~~gatVtv~~~ 191 (283)
T PRK14192 158 AGKHAVVVGRSAILGKPMAMMLL-----NANATVTICHS 191 (283)
T ss_pred CCCEEEEECCcHHHHHHHHHHHH-----hCCCEEEEEeC
Confidence 57899999999999999999999 57778888876
No 440
>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]
Probab=93.49 E-value=0.34 Score=40.76 Aligned_cols=65 Identities=17% Similarity=0.129 Sum_probs=44.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC-C-CCCCCceeEEEeeCC-CHHHHHHHHHhcc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG-W-FPTALVDRYITFDAL-DPTDTALKLSLIS 80 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~-~-~~~~~~~~~i~~Dl~-d~~~~~~~~~~~~ 80 (211)
.++++-|+|+.| +|+-=++... +-|++|+++++...+. . ...-+.+ ++ .|.+ |++.+....+..+
T Consensus 181 pG~~vgI~GlGG-LGh~aVq~AK-----AMG~rV~vis~~~~kkeea~~~LGAd-~f-v~~~~d~d~~~~~~~~~d 248 (360)
T KOG0023|consen 181 PGKWVGIVGLGG-LGHMAVQYAK-----AMGMRVTVISTSSKKKEEAIKSLGAD-VF-VDSTEDPDIMKAIMKTTD 248 (360)
T ss_pred CCcEEEEecCcc-cchHHHHHHH-----HhCcEEEEEeCCchhHHHHHHhcCcc-ee-EEecCCHHHHHHHHHhhc
Confidence 578999999999 9987776666 7999999999986432 1 1223445 43 3445 6666666555543
No 441
>PRK14619 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional
Probab=93.49 E-value=0.15 Score=42.69 Aligned_cols=35 Identities=26% Similarity=0.278 Sum_probs=30.8
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+++|.|+| +|.+|++++..|. ..||+|++.+|++.
T Consensus 4 ~m~I~iiG-~G~~G~~lA~~l~-----~~G~~V~~~~r~~~ 38 (308)
T PRK14619 4 PKTIAILG-AGAWGSTLAGLAS-----ANGHRVRVWSRRSG 38 (308)
T ss_pred CCEEEEEC-ccHHHHHHHHHHH-----HCCCEEEEEeCCCC
Confidence 45799997 8999999999999 68999999999764
No 442
>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase. Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,
Probab=93.48 E-value=0.073 Score=44.75 Aligned_cols=71 Identities=14% Similarity=-0.025 Sum_probs=44.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCC-C-CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGW-F-PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~-~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
..++|+|+|+ |.+|+.+++.|.+ ..+.+|++++|++.+.. + ..-+.. .+ +.+++.+.+.. .|.
T Consensus 177 ~~~~V~ViGa-G~iG~~~a~~L~~----~g~~~V~v~~r~~~ra~~la~~~g~~-~~-----~~~~~~~~l~~----aDv 241 (311)
T cd05213 177 KGKKVLVIGA-GEMGELAAKHLAA----KGVAEITIANRTYERAEELAKELGGN-AV-----PLDELLELLNE----ADV 241 (311)
T ss_pred cCCEEEEECc-HHHHHHHHHHHHH----cCCCEEEEEeCCHHHHHHHHHHcCCe-EE-----eHHHHHHHHhc----CCE
Confidence 4678999995 9999999999983 23467999999865421 1 011112 22 22345555554 577
Q ss_pred EEeecccC
Q 028258 86 LFWVPLQV 93 (211)
Q Consensus 86 v~~~a~~~ 93 (211)
||.+.+..
T Consensus 242 Vi~at~~~ 249 (311)
T cd05213 242 VISATGAP 249 (311)
T ss_pred EEECCCCC
Confidence 77676544
No 443
>PRK06111 acetyl-CoA carboxylase biotin carboxylase subunit; Validated
Probab=93.47 E-value=0.41 Score=42.15 Aligned_cols=72 Identities=6% Similarity=-0.103 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCC-CceeEE-------EeeCCCHHHHHHHHHhc
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTA-LVDRYI-------TFDALDPTDTALKLSLI 79 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~-~~~~~i-------~~Dl~d~~~~~~~~~~~ 79 (211)
|-|++||.| +|.+|..+++.+. +.|+++++++.++........ .-+ .+ ..|..|.+.+.+..+..
T Consensus 1 ~~~~ililg-~g~~~~~~~~~a~-----~lG~~~v~~~~~~~~~a~~~~~ad~-~~~~~~~~~~~~~~d~~~l~~~~~~~ 73 (450)
T PRK06111 1 MFQKVLIAN-RGEIAVRIIRTCQ-----KLGIRTVAIYSEADRDALHVKMADE-AYLIGGPRVQESYLNLEKIIEIAKKT 73 (450)
T ss_pred CcceEEEEC-CcHHHHHHHHHHH-----HcCCeEEEEechhhccCcchhhCCE-EEEcCCCCccccccCHHHHHHHHHHh
Confidence 358899998 8999999999999 799999988754332110010 111 22 24667777777777765
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
+ +|.|+-
T Consensus 74 ~--id~I~p 80 (450)
T PRK06111 74 G--AEAIHP 80 (450)
T ss_pred C--CCEEEe
Confidence 4 676653
No 444
>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]
Probab=93.44 E-value=0.2 Score=41.86 Aligned_cols=75 Identities=19% Similarity=0.082 Sum_probs=48.5
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCC--CCCCceeEEEeeCCCHHHHHHHHHhcc-cccce
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWF--PTALVDRYITFDALDPTDTALKLSLIS-QEITN 85 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~--~~~~~~~~i~~Dl~d~~~~~~~~~~~~-~~~~~ 85 (211)
+.+++|+||+|-+|+-+.+... -+|.+|+++.-.+++..+ ..-++. ...|..++ ++.++|++.. +.||+
T Consensus 151 GetvvVSaAaGaVGsvvgQiAK-----lkG~rVVGiaGg~eK~~~l~~~lGfD--~~idyk~~-d~~~~L~~a~P~GIDv 222 (340)
T COG2130 151 GETVVVSAAAGAVGSVVGQIAK-----LKGCRVVGIAGGAEKCDFLTEELGFD--AGIDYKAE-DFAQALKEACPKGIDV 222 (340)
T ss_pred CCEEEEEecccccchHHHHHHH-----hhCCeEEEecCCHHHHHHHHHhcCCc--eeeecCcc-cHHHHHHHHCCCCeEE
Confidence 6799999999999998776655 689999999887765321 112222 23465554 4666665543 33666
Q ss_pred EEeecc
Q 028258 86 LFWVPL 91 (211)
Q Consensus 86 v~~~a~ 91 (211)
.|-+.+
T Consensus 223 yfeNVG 228 (340)
T COG2130 223 YFENVG 228 (340)
T ss_pred EEEcCC
Confidence 554443
No 445
>PLN02545 3-hydroxybutyryl-CoA dehydrogenase
Probab=93.35 E-value=0.14 Score=42.49 Aligned_cols=35 Identities=17% Similarity=0.274 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 5 ~~V~vIG-~G~mG~~iA~~l~-----~~G~~V~~~d~~~~~ 39 (295)
T PLN02545 5 KKVGVVG-AGQMGSGIAQLAA-----AAGMDVWLLDSDPAA 39 (295)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHHH
Confidence 6799998 7999999999999 689999999987653
No 446
>TIGR00877 purD phosphoribosylamine--glycine ligase. This enzyme appears as a monofunctional protein in prokaryotes but as part of a larger, multidomain protein in eukaryotes.
Probab=93.35 E-value=0.23 Score=43.43 Aligned_cols=69 Identities=20% Similarity=0.061 Sum_probs=43.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
++|+|+| +|..+..|+..+. ..++.+.++............... ++..|..|.+.+.+..+..+ +|.|+
T Consensus 1 ~kiliiG-~G~~~~~l~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~d~~~l~~~~~~~~--id~vi 69 (423)
T TIGR00877 1 MKVLVIG-NGGREHALAWKLA-----QSPLVKYVYVAPGNAGTARLAKNK-NVAISITDIEALVEFAKKKK--IDLAV 69 (423)
T ss_pred CEEEEEC-CChHHHHHHHHHH-----hCCCccEEEEECCCHHHhhhcccc-cccCCCCCHHHHHHHHHHhC--CCEEE
Confidence 3799999 5555999999998 466554444322211110112224 55679999888888877765 67665
No 447
>PRK12833 acetyl-CoA carboxylase biotin carboxylase subunit; Provisional
Probab=93.29 E-value=0.57 Score=41.66 Aligned_cols=70 Identities=9% Similarity=0.087 Sum_probs=46.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCc-eeEEE-e------eCCCHHHHHHHHHhcc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALV-DRYIT-F------DALDPTDTALKLSLIS 80 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~-~~~i~-~------Dl~d~~~~~~~~~~~~ 80 (211)
.|++||.| .|.++..+++.+. +.|++++++....+.......-. + .+. . |..|.+.+.+..+..+
T Consensus 5 ~~~vLi~~-~geia~~ii~aa~-----~lG~~~v~~~s~~d~~~~~~~~aD~-~~~i~p~~~~~~y~d~~~i~~~a~~~~ 77 (467)
T PRK12833 5 IRKVLVAN-RGEIAVRIIRAAR-----ELGMRTVAACSDADRDSLAARMADE-AVHIGPSHAAKSYLNPAAILAAARQCG 77 (467)
T ss_pred CcEEEEEC-CcHHHHHHHHHHH-----HcCCeEEEEECCCCCCChhHHhCCE-EEecCCCCccccccCHHHHHHHHHHhC
Confidence 48899998 8999999999999 79999887754333211000001 2 222 2 6778778877777665
Q ss_pred cccceEE
Q 028258 81 QEITNLF 87 (211)
Q Consensus 81 ~~~~~v~ 87 (211)
+|.|+
T Consensus 78 --~daI~ 82 (467)
T PRK12833 78 --ADAIH 82 (467)
T ss_pred --CCEEE
Confidence 67664
No 448
>PLN02256 arogenate dehydrogenase
Probab=93.26 E-value=0.17 Score=42.41 Aligned_cols=37 Identities=24% Similarity=0.187 Sum_probs=31.5
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+.+++|.|+| .|.+|+.+++.|. +.|++|++++|++.
T Consensus 34 ~~~~kI~IIG-~G~mG~slA~~L~-----~~G~~V~~~d~~~~ 70 (304)
T PLN02256 34 SRKLKIGIVG-FGNFGQFLAKTFV-----KQGHTVLATSRSDY 70 (304)
T ss_pred CCCCEEEEEe-eCHHHHHHHHHHH-----hCCCEEEEEECccH
Confidence 3456899999 7999999999999 57889999998753
No 449
>PRK12815 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=93.24 E-value=0.47 Score=46.58 Aligned_cols=73 Identities=21% Similarity=0.136 Sum_probs=48.1
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
-|+|||+|+.+. | |+.+++.|. +.|++|++++.++........-.. .+..+..+.+.+.+.++.
T Consensus 7 ~~kvlviG~G~~~igq~~E~d~sg~q~~~aL~-----e~G~~vi~v~~np~~~~~d~~~ad-~~y~ep~~~e~l~~ii~~ 80 (1068)
T PRK12815 7 IQKILVIGSGPIVIGQAAEFDYSGTQACLALK-----EEGYQVVLVNPNPATIMTDPAPAD-TVYFEPLTVEFVKRIIAR 80 (1068)
T ss_pred CCEEEEECCCcchhcchhhhhhHHHHHHHHHH-----HcCCEEEEEeCCcchhhcCcccCC-eeEECCCCHHHHHHHHHH
Confidence 478999997665 2 789999999 799999999877653211111112 233444556667776666
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 81 e~--~D~Iip~ 89 (1068)
T PRK12815 81 EK--PDALLAT 89 (1068)
T ss_pred hC--cCEEEEC
Confidence 44 7887653
No 450
>PRK00045 hemA glutamyl-tRNA reductase; Reviewed
Probab=93.23 E-value=0.086 Score=46.29 Aligned_cols=37 Identities=27% Similarity=0.250 Sum_probs=30.9
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
.+++++|+| +|.+|+.+++.|. ..|. +|++++|++.+
T Consensus 181 ~~~~vlViG-aG~iG~~~a~~L~-----~~G~~~V~v~~r~~~r 218 (423)
T PRK00045 181 SGKKVLVIG-AGEMGELVAKHLA-----EKGVRKITVANRTLER 218 (423)
T ss_pred cCCEEEEEC-chHHHHHHHHHHH-----HCCCCeEEEEeCCHHH
Confidence 458899998 5999999999998 5776 68889997654
No 451
>PRK06718 precorrin-2 dehydrogenase; Reviewed
Probab=93.22 E-value=0.16 Score=40.05 Aligned_cols=37 Identities=14% Similarity=-0.000 Sum_probs=31.3
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
...+|+++|+| .|-+|...++.|+ +.|.+|+++++..
T Consensus 7 ~l~~k~vLVIG-gG~va~~ka~~Ll-----~~ga~V~VIs~~~ 43 (202)
T PRK06718 7 DLSNKRVVIVG-GGKVAGRRAITLL-----KYGAHIVVISPEL 43 (202)
T ss_pred EcCCCEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEcCCC
Confidence 34578999999 5999999999999 6889999988654
No 452
>PRK06444 prephenate dehydrogenase; Provisional
Probab=93.20 E-value=0.12 Score=40.63 Aligned_cols=27 Identities=33% Similarity=0.501 Sum_probs=25.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEE
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVY 42 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~ 42 (211)
++.|+||+|.+|+.+++.|. +.||.|+
T Consensus 2 ~~~iiG~~G~mG~~~~~~~~-----~~g~~v~ 28 (197)
T PRK06444 2 MEIIIGKNGRLGRVLCSILD-----DNGLGVY 28 (197)
T ss_pred EEEEEecCCcHHHHHHHHHH-----hCCCEEE
Confidence 68999999999999999999 6899986
No 453
>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.11 E-value=0.18 Score=42.15 Aligned_cols=35 Identities=26% Similarity=0.263 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEe-CC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAA-RR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~-R~ 47 (211)
.+|+|.|.|.++.+|+.++..|+ ++|+.|+++. |+
T Consensus 157 ~Gk~V~viGrs~~mG~PmA~~L~-----~~g~tVtv~~~rT 192 (296)
T PRK14188 157 SGLNAVVIGRSNLVGKPMAQLLL-----AANATVTIAHSRT 192 (296)
T ss_pred CCCEEEEEcCCcchHHHHHHHHH-----hCCCEEEEECCCC
Confidence 57999999999999999999999 6899999984 54
No 454
>PRK09260 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.09 E-value=0.11 Score=43.09 Aligned_cols=35 Identities=14% Similarity=0.241 Sum_probs=30.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.++..|+ ..|++|++++++++.
T Consensus 2 ~~V~VIG-~G~mG~~iA~~la-----~~G~~V~~~d~~~~~ 36 (288)
T PRK09260 2 EKLVVVG-AGVMGRGIAYVFA-----VSGFQTTLVDIKQEQ 36 (288)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hCCCcEEEEeCCHHH
Confidence 5789998 5999999999999 689999999997654
No 455
>PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=93.06 E-value=0.2 Score=42.35 Aligned_cols=35 Identities=17% Similarity=0.154 Sum_probs=31.2
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
-++|.|+| +|-+|+.++..|+ ..|++|++.++++.
T Consensus 7 i~~VaVIG-aG~MG~giA~~~a-----~aG~~V~l~D~~~~ 41 (321)
T PRK07066 7 IKTFAAIG-SGVIGSGWVARAL-----AHGLDVVAWDPAPG 41 (321)
T ss_pred CCEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHH
Confidence 36799998 7999999999999 69999999998765
No 456
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=93.04 E-value=0.17 Score=42.25 Aligned_cols=36 Identities=25% Similarity=0.272 Sum_probs=32.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|+|.|+|.+|.+|+.++..|+ ++|+.|+.+.|+.
T Consensus 158 ~Gk~V~vIG~s~ivG~PmA~~L~-----~~gatVtv~~~~t 193 (301)
T PRK14194 158 TGKHAVVIGRSNIVGKPMAALLL-----QAHCSVTVVHSRS 193 (301)
T ss_pred CCCEEEEECCCCccHHHHHHHHH-----HCCCEEEEECCCC
Confidence 47999999999999999999999 6899999997653
No 457
>PRK11559 garR tartronate semialdehyde reductase; Provisional
Probab=92.93 E-value=0.15 Score=42.23 Aligned_cols=34 Identities=24% Similarity=0.328 Sum_probs=29.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|.+|+.+++.|. ..|++|++.+|++.
T Consensus 3 ~~IgviG-~G~mG~~~a~~l~-----~~g~~v~~~d~~~~ 36 (296)
T PRK11559 3 MKVGFIG-LGIMGKPMSKNLL-----KAGYSLVVYDRNPE 36 (296)
T ss_pred ceEEEEc-cCHHHHHHHHHHH-----HCCCeEEEEcCCHH
Confidence 4689998 8999999999999 68899999998764
No 458
>TIGR00514 accC acetyl-CoA carboxylase, biotin carboxylase subunit. This model represents the biotin carboxylase subunit found usually as a component of acetyl-CoA carboxylase. Acetyl-CoA carboxylase is designated EC 6.4.1.2 and this component, biotin carboxylase, has its own designation, EC 6.3.4.14. Homologous domains are found in eukaryotic forms of acetyl-CoA carboxylase and in a number of other carboxylases (e.g. pyruvate carboxylase), but seed members and trusted cutoff are selected so as to exclude these. In some systems, the biotin carboxyl carrier protein and this protein (biotin carboxylase) may be shared by different carboxyltransferases. However, this model is not intended to identify the biotin carboxylase domain of propionyl-coA carboxylase. The model should hit the full length of proteins, except for chloroplast transit peptides in plants. If it hits a domain only of a longer protein, there may be a problem with the identification.
Probab=92.91 E-value=0.56 Score=41.40 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=44.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCC--CCCCCCceeEEEe-------eCCCHHHHHHHHHhc
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPG--WFPTALVDRYITF-------DALDPTDTALKLSLI 79 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~--~~~~~~~~~~i~~-------Dl~d~~~~~~~~~~~ 79 (211)
.|++||.| .|.++.-+++.+. +.|++|++++..+... ...... + .+.. +..|.+.+.+..+..
T Consensus 2 ~kkili~g-~g~~~~~~~~aa~-----~lG~~vv~~~~~~d~~a~~~~~aD-~-~~~~~~~~~~~~y~d~~~l~~~a~~~ 73 (449)
T TIGR00514 2 LDKILIAN-RGEIALRILRACK-----ELGIKTVAVHSTADRDALHVLLAD-E-AVCIGPAPSAKSYLNIPNIISAAEIT 73 (449)
T ss_pred cceEEEeC-CCHHHHHHHHHHH-----HcCCeEEEEEChhhhcccccccCC-E-EEEcCCCCchhchhCHHHHHHHHHHh
Confidence 47899996 8999999999999 6999999987543211 111111 2 2222 455555666655544
Q ss_pred ccccceEEe
Q 028258 80 SQEITNLFW 88 (211)
Q Consensus 80 ~~~~~~v~~ 88 (211)
. +|.|+-
T Consensus 74 ~--id~I~p 80 (449)
T TIGR00514 74 G--ADAIHP 80 (449)
T ss_pred C--CCEEEe
Confidence 3 677653
No 459
>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family. The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro
Probab=92.87 E-value=0.13 Score=41.21 Aligned_cols=36 Identities=28% Similarity=0.395 Sum_probs=30.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.++++||+|+++ +|..+++.+. ..|.+|+++++++.
T Consensus 134 ~~~~vli~g~~~-~G~~~~~~a~-----~~g~~v~~~~~~~~ 169 (271)
T cd05188 134 PGDTVLVLGAGG-VGLLAAQLAK-----AAGARVIVTDRSDE 169 (271)
T ss_pred CCCEEEEECCCH-HHHHHHHHHH-----HcCCeEEEEcCCHH
Confidence 357899999999 9999998888 68889999988754
No 460
>PRK05294 carB carbamoyl phosphate synthase large subunit; Reviewed
Probab=92.87 E-value=0.66 Score=45.57 Aligned_cols=73 Identities=16% Similarity=0.154 Sum_probs=45.5
Q ss_pred CCeEEEEcCCCh-H---------HHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHh
Q 028258 9 KSVALIIGVTGI-S---------GLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSL 78 (211)
Q Consensus 9 ~~~ilVtGatG~-i---------G~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~ 78 (211)
.|+|||+|+.+. | |..+++.|. +.|++|++++.++........-.. .......+.+.+.+.++.
T Consensus 7 ~~kvLiig~G~~~igq~~e~d~sg~~~~~aLk-----e~G~~vi~v~~~p~~~~~~~~~aD-~~y~~p~~~e~l~~ii~~ 80 (1066)
T PRK05294 7 IKKILIIGSGPIVIGQACEFDYSGTQACKALR-----EEGYRVVLVNSNPATIMTDPEMAD-ATYIEPITPEFVEKIIEK 80 (1066)
T ss_pred CCEEEEECCchhhhcccccccchHHHHHHHHH-----HcCCEEEEEcCCcccccCCcccCC-EEEECCCCHHHHHHHHHH
Confidence 478999996653 4 478999999 799999999877643110011111 111222345667776665
Q ss_pred cccccceEEee
Q 028258 79 ISQEITNLFWV 89 (211)
Q Consensus 79 ~~~~~~~v~~~ 89 (211)
.. +|.|+..
T Consensus 81 e~--~D~Iip~ 89 (1066)
T PRK05294 81 ER--PDAILPT 89 (1066)
T ss_pred HC--cCEEEEC
Confidence 44 7887754
No 461
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=92.87 E-value=0.31 Score=32.04 Aligned_cols=32 Identities=25% Similarity=0.316 Sum_probs=22.1
Q ss_pred CCeEEEEcCCChHHHH--HHHHhhCCCCCCCCcEEEEEeC
Q 028258 9 KSVALIIGVTGISGLS--LAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~--l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.|++||+|||...|.+ |+..+- .|.+.+++..
T Consensus 39 pK~VLViGaStGyGLAsRIa~aFg------~gA~TiGV~f 72 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAAFG------AGADTIGVSF 72 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHHHC------C--EEEEEE-
T ss_pred CceEEEEecCCcccHHHHHHHHhc------CCCCEEEEee
Confidence 5899999999999988 666664 6677777764
No 462
>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B.
Probab=92.86 E-value=0.25 Score=34.41 Aligned_cols=37 Identities=19% Similarity=0.048 Sum_probs=30.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
+..++++||+|+ |-+|..=++.|+ +.|.+|++++...
T Consensus 4 ~l~~~~vlVvGg-G~va~~k~~~Ll-----~~gA~v~vis~~~ 40 (103)
T PF13241_consen 4 DLKGKRVLVVGG-GPVAARKARLLL-----EAGAKVTVISPEI 40 (103)
T ss_dssp --TT-EEEEEEE-SHHHHHHHHHHC-----CCTBEEEEEESSE
T ss_pred EcCCCEEEEECC-CHHHHHHHHHHH-----hCCCEEEEECCch
Confidence 345789999994 999999999999 6889999999874
No 463
>PRK12409 D-amino acid dehydrogenase small subunit; Provisional
Probab=92.85 E-value=0.19 Score=43.59 Aligned_cols=33 Identities=33% Similarity=0.422 Sum_probs=29.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
++|+|+| +|++|..++.+|. +.|.+|+++.|..
T Consensus 2 ~~vvIIG-aG~~G~~~A~~La-----~~g~~V~vle~~~ 34 (410)
T PRK12409 2 SHIAVIG-AGITGVTTAYALA-----QRGYQVTVFDRHR 34 (410)
T ss_pred CEEEEEC-CCHHHHHHHHHHH-----HCCCeEEEEeCCC
Confidence 5799998 7999999999999 5799999999975
No 464
>TIGR01161 purK phosphoribosylaminoimidazole carboxylase, PurK protein. Phosphoribosylaminoimidazole carboxylase is a fusion protein in plants and fungi, but consists of two non-interacting proteins in bacteria, PurK and PurE. This model represents PurK, N5-carboxyaminoimidazole ribonucleotide synthetase, which hydrolyzes ATP and converts AIR to N5-CAIR. PurE converts N5-CAIR to CAIR. In the presence of high concentrations of bicarbonate, PurE is reported able to convert AIR to CAIR directly and without ATP.
Probab=92.85 E-value=0.37 Score=41.03 Aligned_cols=61 Identities=18% Similarity=0.007 Sum_probs=45.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhc
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
+|+|+|+ |.+|+.++..+. +.|++|++++.++...... -.-+ .+..|+.|++.+.+.++.+
T Consensus 1 ~igiiG~-gql~~~l~~aa~-----~lG~~v~~~d~~~~~p~~~-~ad~-~~~~~~~d~~~i~~~a~~~ 61 (352)
T TIGR01161 1 TVGILGG-GQLGRMLALAAR-----PLGIKVHVLDPDANSPAVQ-VADH-VVLAPFFDPAAIRELAESC 61 (352)
T ss_pred CEEEECC-CHHHHHHHHHHH-----HcCCEEEEECCCCCCChhH-hCce-eEeCCCCCHHHHHHHHhhC
Confidence 4789995 799999999999 6899999998876542111 1113 5577889988888877654
No 465
>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in
Probab=92.84 E-value=0.17 Score=42.51 Aligned_cols=37 Identities=16% Similarity=0.160 Sum_probs=31.9
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
+.++||+||+|.+|..+++.+. ..|.+|+++++++.+
T Consensus 152 g~~VlI~Ga~G~vG~~aiqlAk-----~~G~~Vi~~~~~~~~ 188 (338)
T cd08295 152 GETVFVSAASGAVGQLVGQLAK-----LKGCYVVGSAGSDEK 188 (338)
T ss_pred CCEEEEecCccHHHHHHHHHHH-----HcCCEEEEEeCCHHH
Confidence 5789999999999999998777 689999988887654
No 466
>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional
Probab=92.82 E-value=1.3 Score=37.74 Aligned_cols=36 Identities=33% Similarity=0.285 Sum_probs=29.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~ 48 (211)
.++++|+|+| .|.+|+++++.|. ..|. ++++++++.
T Consensus 22 L~~~~VlIiG-~GglGs~va~~La-----~aGvg~i~lvD~D~ 58 (338)
T PRK12475 22 IREKHVLIVG-AGALGAANAEALV-----RAGIGKLTIADRDY 58 (338)
T ss_pred hcCCcEEEEC-CCHHHHHHHHHHH-----HcCCCEEEEEcCCc
Confidence 3567899999 5889999999999 5776 688888764
No 467
>PF03721 UDPG_MGDP_dh_N: UDP-glucose/GDP-mannose dehydrogenase family, NAD binding domain; InterPro: IPR001732 The UDP-glucose/GDP-mannose dehydrogenases are a small group of enzymes which possesses the ability to catalyse the NAD-dependent 2-fold oxidation of an alcohol to an acid without the release of an aldehyde intermediate [, ]. The enzymes have a wide range of functions. In plants UDP-glucose dehydrogenase, 1.1.1.22 from EC, is an important enzyme in the synthesis of hemicellulose and pectin [], which are the components of newly formed cell walls; while in zebrafish UDP-glucose dehydrogenase is required for cardiac valve formation []. In Xanthomonas campestris, a plant pathogen, UDP-glucose dehydrogenase is required for virulence []. GDP-mannose dehydrogenase, 1.1.1.132 from EC, catalyses the formation of GDP-mannuronic acid, which is the monomeric unit from which the exopolysaccharide alginate is formed. Alginate is secreted by a number of bacteria, which include Pseudomonas aeruginosa and Azotobacter vinelandii. In P. aeruginosa, alginate is believed to play an important role in the bacteria's resistance to antibiotics and the host immune response [], while in A. vinelandii it is essential for the encystment process []. This entry represents the N-terminal NAD(+)-binding domain. Structural studies indicate that this domain forms an alpha-beta structure containing the six-stranded parallel beta sheet characteristic of the dinucleotide binding Rossman fold [, ].; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0055114 oxidation-reduction process; PDB: 3OJO_A 3OJL_A 1MV8_B 1MUU_A 1MFZ_C 3GG2_D 1DLJ_A 1DLI_A 3G79_B 2Y0E_D ....
Probab=92.79 E-value=0.11 Score=40.36 Aligned_cols=34 Identities=32% Similarity=0.388 Sum_probs=26.5
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| .|++|.-++..|. +.||+|++++.++.
T Consensus 1 M~I~ViG-lGyvGl~~A~~lA-----~~G~~V~g~D~~~~ 34 (185)
T PF03721_consen 1 MKIAVIG-LGYVGLPLAAALA-----EKGHQVIGVDIDEE 34 (185)
T ss_dssp -EEEEE---STTHHHHHHHHH-----HTTSEEEEE-S-HH
T ss_pred CEEEEEC-CCcchHHHHHHHH-----hCCCEEEEEeCChH
Confidence 4688887 9999999999999 79999999998765
No 468
>cd05288 PGDH Prostaglandin dehydrogenases. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino
Probab=92.70 E-value=0.23 Score=41.28 Aligned_cols=36 Identities=17% Similarity=0.151 Sum_probs=31.4
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
..++||.|++|.+|..+++.+. ..|.+|+++++++.
T Consensus 146 ~~~vlI~g~~g~ig~~~~~~a~-----~~G~~vi~~~~~~~ 181 (329)
T cd05288 146 GETVVVSAAAGAVGSVVGQIAK-----LLGARVVGIAGSDE 181 (329)
T ss_pred CCEEEEecCcchHHHHHHHHHH-----HcCCEEEEEeCCHH
Confidence 5789999999999999999888 68889998887654
No 469
>PRK06395 phosphoribosylamine--glycine ligase; Provisional
Probab=92.63 E-value=0.75 Score=40.58 Aligned_cols=72 Identities=15% Similarity=0.116 Sum_probs=48.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEE
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLF 87 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~ 87 (211)
|.++|||+| +|.-..+|+..|. +.+++|+++.-+.......... . ++.+|..|.+.+.+..+..+ +|.|+
T Consensus 1 ~~~kVLvlG-~G~re~al~~~l~-----~~g~~v~~~~~~~Npg~~~~a~-~-~~~~~~~d~e~l~~~~~~~~--id~Vi 70 (435)
T PRK06395 1 MTMKVMLVG-SGGREDAIARAIK-----RSGAILFSVIGHENPSIKKLSK-K-YLFYDEKDYDLIEDFALKNN--VDIVF 70 (435)
T ss_pred CceEEEEEC-CcHHHHHHHHHHH-----hCCCeEEEEECCCChhhhhccc-c-eeecCCCCHHHHHHHHHHhC--CCEEE
Confidence 457899998 7888889999998 5678888765422211100011 3 45688899988888877765 77776
Q ss_pred ee
Q 028258 88 WV 89 (211)
Q Consensus 88 ~~ 89 (211)
-.
T Consensus 71 ~~ 72 (435)
T PRK06395 71 VG 72 (435)
T ss_pred EC
Confidence 43
No 470
>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB. This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).
Probab=92.46 E-value=1.9 Score=34.91 Aligned_cols=36 Identities=19% Similarity=0.095 Sum_probs=28.4
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~ 49 (211)
..++|+|.| .|.+|+.++..|. ..|.. +++++.+.-
T Consensus 23 ~~~~VlvvG-~GglGs~va~~La-----~~Gvg~i~lvD~D~v 59 (240)
T TIGR02355 23 KASRVLIVG-LGGLGCAASQYLA-----AAGVGNLTLLDFDTV 59 (240)
T ss_pred hCCcEEEEC-cCHHHHHHHHHHH-----HcCCCEEEEEeCCcc
Confidence 467899998 8999999999999 45644 777776543
No 471
>PRK06035 3-hydroxyacyl-CoA dehydrogenase; Validated
Probab=92.46 E-value=0.22 Score=41.29 Aligned_cols=35 Identities=17% Similarity=0.282 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| +|.+|+.++..|+ ..|++|+++++++..
T Consensus 4 ~~I~ViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~~ 38 (291)
T PRK06035 4 KVIGVVG-SGVMGQGIAQVFA-----RTGYDVTIVDVSEEI 38 (291)
T ss_pred cEEEEEC-ccHHHHHHHHHHH-----hcCCeEEEEeCCHHH
Confidence 6799998 7999999999999 689999999987653
No 472
>cd01339 LDH-like_MDH L-lactate dehydrogenase-like malate dehydrogenase proteins. Members of this subfamily have an LDH-like structure and an MDH enzymatic activity. Some members, like MJ0490 from Methanococcus jannaschii, exhibit both MDH and LDH activities. Tetrameric MDHs, including those from phototrophic bacteria, are more similar to LDHs than to other MDHs. LDH catalyzes the last step of glycolysis in which pyruvate is converted to L-lactate. MDH is one of the key enzymes in the citric acid cycle, facilitating both the conversion of malate to oxaloacetate and replenishing levels of oxalacetate by reductive carboxylation of pyruvate. The LDH-like MDHs are part of the NAD(P)-binding Rossmann fold superfamily, which includes a wide variety of protein families including the NAD(P)-binding domains of alcohol dehydrogenases, tyrosine-dependent oxidoreductases, glyceraldehyde-3-phosphate dehydrogenases, formate/glycerate dehydrogenases, siroheme synthases, 6-phosphogluconate dehydrogenas
Probab=92.44 E-value=0.6 Score=38.94 Aligned_cols=90 Identities=17% Similarity=0.031 Sum_probs=55.8
Q ss_pred EEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCC-----CCC------CCceeEEEeeCCCHHHHHHHHHhc
Q 028258 12 ALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGW-----FPT------ALVDRYITFDALDPTDTALKLSLI 79 (211)
Q Consensus 12 ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~-----~~~------~~~~~~i~~Dl~d~~~~~~~~~~~ 79 (211)
|.|+|| |.+|..++..|+ ..+. +|+++++++.... ..+ .... +... .| . +.+++
T Consensus 1 I~IIGa-G~vG~~ia~~la-----~~~l~eV~L~Di~e~~~~g~~~dl~~~~~~~~~~~~--I~~t-~d---~-~~l~d- 66 (300)
T cd01339 1 ISIIGA-GNVGATLAQLLA-----LKELGDVVLLDIVEGLPQGKALDISQAAPILGSDTK--VTGT-ND---Y-EDIAG- 66 (300)
T ss_pred CEEECC-CHHHHHHHHHHH-----hCCCcEEEEEeCCCcHHHHHHHHHHHhhhhcCCCeE--EEEc-CC---H-HHhCC-
Confidence 468997 999999999988 4555 8999999765311 000 0111 1110 12 1 22444
Q ss_pred ccccceEEeecccCCc---hhHHHHhhcHHHHHHHHHHHHhc
Q 028258 80 SQEITNLFWVPLQVQE---SEEVNIFKNSTMLKNVLSVLVSS 118 (211)
Q Consensus 80 ~~~~~~v~~~a~~~~~---~~~~~~~~n~~~~~~l~~~~~~~ 118 (211)
.|.||.+++.+.. +..+....|....+.+++.+.+.
T Consensus 67 ---ADiVIit~g~p~~~~~~r~e~~~~n~~i~~~i~~~i~~~ 105 (300)
T cd01339 67 ---SDVVVITAGIPRKPGMSRDDLLGTNAKIVKEVAENIKKY 105 (300)
T ss_pred ---CCEEEEecCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence 5788888776432 22345566888888888888877
No 473
>PRK08773 2-octaprenyl-3-methyl-6-methoxy-1,4-benzoquinol hydroxylase; Validated
Probab=92.43 E-value=0.28 Score=42.18 Aligned_cols=40 Identities=28% Similarity=0.369 Sum_probs=33.9
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|++++...|+|.| .|-.|..++..|. ..|++|.++.|.+.
T Consensus 1 ~~~~~~~dV~IvG-aG~aGl~~A~~La-----~~G~~v~liE~~~~ 40 (392)
T PRK08773 1 MSRRSRRDAVIVG-GGVVGAACALALA-----DAGLSVALVEGREP 40 (392)
T ss_pred CCCCCCCCEEEEC-cCHHHHHHHHHHh-----cCCCEEEEEeCCCC
Confidence 4555567899998 8999999999998 68999999999764
No 474
>PRK06719 precorrin-2 dehydrogenase; Validated
Probab=92.42 E-value=0.26 Score=37.17 Aligned_cols=33 Identities=27% Similarity=0.218 Sum_probs=29.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAAR 46 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R 46 (211)
.+++++|.| .|-+|...++.|+ +.|++|++++.
T Consensus 12 ~~~~vlVvG-GG~va~rka~~Ll-----~~ga~V~VIsp 44 (157)
T PRK06719 12 HNKVVVIIG-GGKIAYRKASGLK-----DTGAFVTVVSP 44 (157)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEEcC
Confidence 478999998 8999999999999 68999998853
No 475
>PRK12767 carbamoyl phosphate synthase-like protein; Provisional
Probab=92.42 E-value=0.47 Score=39.75 Aligned_cols=35 Identities=23% Similarity=0.152 Sum_probs=27.4
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCC-CcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGS-PWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~-g~~V~~~~R~~~~ 50 (211)
++|||||+++.. .+++.|.+ .. |++|++++.++..
T Consensus 2 ~~vLv~g~~~~~--~~~~~l~~----~~~g~~vi~~d~~~~~ 37 (326)
T PRK12767 2 MNILVTSAGRRV--QLVKALKK----SLLKGRVIGADISELA 37 (326)
T ss_pred ceEEEecCCccH--HHHHHHHH----hccCCEEEEECCCCcc
Confidence 679999997776 88999984 22 6999999877543
No 476
>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]
Probab=92.40 E-value=0.44 Score=40.37 Aligned_cols=34 Identities=32% Similarity=0.302 Sum_probs=31.2
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|++-|+| .|-||+++++.|. .-|.+|++.++-
T Consensus 141 ~gkTvGIiG-~G~IG~~va~~l~-----afgm~v~~~d~~ 174 (324)
T COG0111 141 AGKTVGIIG-LGRIGRAVAKRLK-----AFGMKVIGYDPY 174 (324)
T ss_pred cCCEEEEEC-CCHHHHHHHHHHH-----hCCCeEEEECCC
Confidence 478999998 9999999999999 799999999983
No 477
>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]
Probab=92.32 E-value=0.44 Score=46.72 Aligned_cols=119 Identities=14% Similarity=0.084 Sum_probs=76.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCCCC---------CCCCCCCcee-EEEeeCCCHHHHHHHH
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRPPP---------GWFPTALVDR-YITFDALDPTDTALKL 76 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~~~---------~~~~~~~~~~-~i~~Dl~d~~~~~~~~ 76 (211)
..|..+|+|+-|+-|..|++.|. .+|.+ ++..+|+--+ .| ...+++. +-.-|++..+...+.+
T Consensus 1767 peksYii~GGLGGFGLELaqWLi-----~RGar~lVLtSRsGirtGYQa~~vrrW-r~~GVqV~vsT~nitt~~ga~~Li 1840 (2376)
T KOG1202|consen 1767 PEKSYIIVGGLGGFGLELAQWLI-----QRGARKLVLTSRSGIRTGYQALMVRRW-RRRGVQVQVSTSNITTAEGARGLI 1840 (2376)
T ss_pred ccceEEEeccccchhHHHHHHHH-----hcCceEEEEeccccchhhHHHHHHHHH-HhcCeEEEEecccchhhhhHHHHH
Confidence 35789999999999999999999 57777 5555665433 12 1234441 3356777766666666
Q ss_pred Hhccc--ccceEEeecccCCc---------hhHHHHhhcHHHHHHHHHHHHhcCCCCCCceEEEEeecCe
Q 028258 77 SLISQ--EITNLFWVPLQVQE---------SEEVNIFKNSTMLKNVLSVLVSSNSGRSRLRHVALLTGTK 135 (211)
Q Consensus 77 ~~~~~--~~~~v~~~a~~~~~---------~~~~~~~~n~~~~~~l~~~~~~~~~~~~~~~~~~~~s~~~ 135 (211)
+.... .+-.|||+|..-.+ +.++..+--..+|.||=.+-+.. ++.+..|+..||..
T Consensus 1841 ~~s~kl~~vGGiFnLA~VLRD~LiEnQt~knFk~va~pK~~~Ti~LD~~sRe~---C~~LdyFv~FSSvs 1907 (2376)
T KOG1202|consen 1841 EESNKLGPVGGIFNLAAVLRDGLIENQTPKNFKDVAKPKYSGTINLDRVSREI---CPELDYFVVFSSVS 1907 (2376)
T ss_pred HHhhhcccccchhhHHHHHHhhhhcccChhHHHhhhccceeeeeehhhhhhhh---CcccceEEEEEeec
Confidence 54332 26678888854221 22222233455677777777777 77788888777643
No 478
>cd01492 Aos1_SUMO Ubiquitin activating enzyme (E1) subunit Aos1. Aos1 is part of the heterodimeric activating enzyme (E1), specific for the SUMO family of ubiquitin-like proteins (Ubls). E1 enzymes are part of a conjugation cascade to attach Ub or Ubls, covalently to substrate proteins consisting of activating (E1), conjugating (E2), and/or ligating (E3) enzymes. E1 activates ubiquitin by C-terminal adenylation, and subsequently forms a highly reactive thioester bond between its catalytic cysteine and Ubls C-terminus. The E1 also associates with E2 and promotes ubiquitin transfer to the E2's catalytic cysteine. Post-translational modification by SUMO family of ubiquitin-like proteins (Ublps) is involved in cell division, nuclear transport, the stress response and signal transduction. Aos1 contains part of the adenylation domain.
Probab=92.28 E-value=0.21 Score=39.11 Aligned_cols=35 Identities=23% Similarity=0.153 Sum_probs=27.6
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcE-EEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWK-VYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~-V~~~~R~~ 48 (211)
+.++|+|.|+. .+|+++++.|. ..|.. +++++...
T Consensus 20 ~~s~VlIiG~g-glG~evak~La-----~~GVg~i~lvD~d~ 55 (197)
T cd01492 20 RSARILLIGLK-GLGAEIAKNLV-----LSGIGSLTILDDRT 55 (197)
T ss_pred HhCcEEEEcCC-HHHHHHHHHHH-----HcCCCEEEEEECCc
Confidence 46789999855 49999999999 57765 88887653
No 479
>PLN02775 Probable dihydrodipicolinate reductase
Probab=92.16 E-value=5.6 Score=33.12 Aligned_cols=35 Identities=23% Similarity=0.274 Sum_probs=28.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEE-EeCCC
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYG-AARRP 48 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~-~~R~~ 48 (211)
.-+|+|.||+|-+|+.+++.+. +.++++.+ +++.+
T Consensus 11 ~i~V~V~Ga~G~MG~~~~~av~-----~~~~~Lv~~~~~~~ 46 (286)
T PLN02775 11 AIPIMVNGCTGKMGHAVAEAAV-----SAGLQLVPVSFTGP 46 (286)
T ss_pred CCeEEEECCCChHHHHHHHHHh-----cCCCEEEEEecccc
Confidence 3579999999999999999999 57888665 45443
No 480
>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=92.08 E-value=0.31 Score=40.50 Aligned_cols=35 Identities=23% Similarity=0.190 Sum_probs=31.3
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARR 47 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~ 47 (211)
.+|+++|+|+++.+|+-++..|. ..|..|+.+.++
T Consensus 157 ~Gk~vvVIGrs~~VG~pla~lL~-----~~gatVtv~~s~ 191 (286)
T PRK14175 157 EGKNAVVIGRSHIVGQPVSKLLL-----QKNASVTILHSR 191 (286)
T ss_pred CCCEEEEECCCchhHHHHHHHHH-----HCCCeEEEEeCC
Confidence 47899999999999999999999 688899988764
No 481
>PF02844 GARS_N: Phosphoribosylglycinamide synthetase, N domain; InterPro: IPR020562 Phosphoribosylglycinamide synthetase (6.3.4.13 from EC) (GARS) (phosphoribosylamine glycine ligase) [] catalyses the second step in the de novo biosynthesis of purine. The reaction catalysed by phosphoribosylglycinamide synthetase is the ATP-dependent addition of 5-phosphoribosylamine to glycine to form 5'phosphoribosylglycinamide: ATP + 5-phosphoribosylamine + glycine = ADP + Pi + 5'-phosphoribosylglycinamide In bacteria, GARS is a monofunctional enzyme (encoded by the purD gene). In yeast, GARS is part of a bifunctional enzyme (encoded by the ADE5/7 gene) in conjunction with phosphoribosylformylglycinamidine cyclo-ligase (AIRS) (IPR000728 from INTERPRO). In higher eukaryotes, GARS is part of a trifunctional enzyme in conjunction with AIRS (IPR000728 from INTERPRO) and with phosphoribosylglycinamide formyltransferase (GART) (), forming GARS-AIRS-GART. This entry represents the N-domain, which is related to the N-terminal domain of biotin carboxylase/carbamoyl phosphate synthetase (IPR005481 from INTERPRO).; GO: 0004637 phosphoribosylamine-glycine ligase activity, 0009113 purine base biosynthetic process; PDB: 3MJF_A 2XD4_A 2XCL_A 2IP4_A 2YW2_B 2YYA_A 3LP8_A 1VKZ_A 2YS6_A 2YRX_A ....
Probab=92.07 E-value=1.3 Score=30.87 Aligned_cols=67 Identities=25% Similarity=0.225 Sum_probs=42.6
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
+|||.| +|.=-.+|+..|.++ ....+|++.--++-- ....+ .+..|.+|.+.+.+..+... +|.||.
T Consensus 2 kVLviG-sGgREHAia~~l~~s---~~v~~v~~aPGN~G~----~~~~~-~~~~~~~d~~~l~~~a~~~~--idlvvv 68 (100)
T PF02844_consen 2 KVLVIG-SGGREHAIAWKLSQS---PSVEEVYVAPGNPGT----AELGK-NVPIDITDPEELADFAKENK--IDLVVV 68 (100)
T ss_dssp EEEEEE-SSHHHHHHHHHHTTC---TTEEEEEEEE--TTG----GGTSE-EE-S-TT-HHHHHHHHHHTT--ESEEEE
T ss_pred EEEEEC-CCHHHHHHHHHHhcC---CCCCEEEEeCCCHHH----Hhhce-ecCCCCCCHHHHHHHHHHcC--CCEEEE
Confidence 699998 888899999999852 223457766544321 12223 55569999999888887765 787753
No 482
>COG2099 CobK Precorrin-6x reductase [Coenzyme metabolism]
Probab=92.02 E-value=4 Score=33.22 Aligned_cols=72 Identities=17% Similarity=0.015 Sum_probs=42.3
Q ss_pred CCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcccccceEEe
Q 028258 9 KSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLISQEITNLFW 88 (211)
Q Consensus 9 ~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~v~~ 88 (211)
.+.|+|.|||+- ++.|++.|. ..+..+++.+-...-.....+... ...+-..+.+.+.+.++... ++.+|-
T Consensus 2 ~~~ilvlGGT~D-ar~la~~L~-----~~~~~~~~ss~t~~g~~l~~~~~~-~~~~G~l~~e~l~~~l~e~~--i~llID 72 (257)
T COG2099 2 MMRILLLGGTSD-ARALAKKLA-----AAPVDIILSSLTGYGAKLAEQIGP-VRVGGFLGAEGLAAFLREEG--IDLLID 72 (257)
T ss_pred CceEEEEeccHH-HHHHHHHhh-----ccCccEEEEEcccccccchhccCC-eeecCcCCHHHHHHHHHHcC--CCEEEE
Confidence 356999999975 899999998 454333332221111000112222 44566667788888887765 666664
Q ss_pred e
Q 028258 89 V 89 (211)
Q Consensus 89 ~ 89 (211)
.
T Consensus 73 A 73 (257)
T COG2099 73 A 73 (257)
T ss_pred C
Confidence 4
No 483
>PRK07531 bifunctional 3-hydroxyacyl-CoA dehydrogenase/thioesterase; Validated
Probab=91.96 E-value=0.28 Score=44.01 Aligned_cols=35 Identities=23% Similarity=0.137 Sum_probs=30.6
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| +|.+|+.++..|+ ..|++|++.++++.+
T Consensus 5 ~kIavIG-~G~MG~~iA~~la-----~~G~~V~v~D~~~~~ 39 (495)
T PRK07531 5 MKAACIG-GGVIGGGWAARFL-----LAGIDVAVFDPHPEA 39 (495)
T ss_pred CEEEEEC-cCHHHHHHHHHHH-----hCCCeEEEEeCCHHH
Confidence 4688887 9999999999999 689999999997654
No 484
>PRK05808 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.94 E-value=0.21 Score=41.20 Aligned_cols=35 Identities=17% Similarity=0.173 Sum_probs=30.3
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|..++..|+ ..|++|++++++++.
T Consensus 4 ~kI~VIG-~G~mG~~ia~~la-----~~g~~V~~~d~~~~~ 38 (282)
T PRK05808 4 QKIGVIG-AGTMGNGIAQVCA-----VAGYDVVMVDISDAA 38 (282)
T ss_pred cEEEEEc-cCHHHHHHHHHHH-----HCCCceEEEeCCHHH
Confidence 5688998 6999999999999 689999999987653
No 485
>COG0026 PurK Phosphoribosylaminoimidazole carboxylase (NCAIR synthetase) [Nucleotide transport and metabolism]
Probab=91.89 E-value=0.89 Score=38.98 Aligned_cols=63 Identities=17% Similarity=-0.011 Sum_probs=48.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCCCCCCCCCCceeEEEeeCCCHHHHHHHHHhcc
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPPPGWFPTALVDRYITFDALDPTDTALKLSLIS 80 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~~~~~~~~~~~~~i~~Dl~d~~~~~~~~~~~~ 80 (211)
++|.|+| .|.+|+=++.+-. .-|++|+.++-+++... ..-.-+ ++..+.+|++.+.+..+.++
T Consensus 2 ~tvgIlG-GGQLgrMm~~aa~-----~lG~~v~vLdp~~~~PA-~~va~~-~i~~~~dD~~al~ela~~~D 64 (375)
T COG0026 2 KTVGILG-GGQLGRMMALAAA-----RLGIKVIVLDPDADAPA-AQVADR-VIVAAYDDPEALRELAAKCD 64 (375)
T ss_pred CeEEEEc-CcHHHHHHHHHHH-----hcCCEEEEecCCCCCch-hhcccc-eeecCCCCHHHHHHHHhhCC
Confidence 6799998 8999999999988 68999999997666421 011123 67888889999999888754
No 486
>PRK11880 pyrroline-5-carboxylate reductase; Reviewed
Probab=91.82 E-value=0.25 Score=40.27 Aligned_cols=35 Identities=17% Similarity=0.122 Sum_probs=28.8
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~~R~~~~ 50 (211)
++|.|+| .|.+|+.+++.|. ..| ++|++++|++.+
T Consensus 3 m~I~iIG-~G~mG~~la~~l~-----~~g~~~~~v~v~~r~~~~ 40 (267)
T PRK11880 3 KKIGFIG-GGNMASAIIGGLL-----ASGVPAKDIIVSDPSPEK 40 (267)
T ss_pred CEEEEEe-chHHHHHHHHHHH-----hCCCCcceEEEEcCCHHH
Confidence 4689998 6999999999999 456 679999997643
No 487
>PRK06522 2-dehydropantoate 2-reductase; Reviewed
Probab=91.82 E-value=0.26 Score=40.74 Aligned_cols=33 Identities=30% Similarity=0.293 Sum_probs=29.0
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|+|.| +|-+|+.++..|. ..|++|+.++|+++
T Consensus 2 ~I~IiG-~G~~G~~~a~~L~-----~~g~~V~~~~r~~~ 34 (304)
T PRK06522 2 KIAILG-AGAIGGLFGAALA-----QAGHDVTLVARRGA 34 (304)
T ss_pred EEEEEC-CCHHHHHHHHHHH-----hCCCeEEEEECChH
Confidence 589999 5999999999999 58899999999654
No 488
>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E.coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.
Probab=91.77 E-value=1.1 Score=36.05 Aligned_cols=36 Identities=25% Similarity=0.114 Sum_probs=28.4
Q ss_pred CCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCC
Q 028258 6 QNPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (211)
Q Consensus 6 ~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~ 47 (211)
.-++++|+|.| .|.+|+++++.|. ..|. ++++++.+
T Consensus 8 ~L~~~~VlVvG-~GGvGs~va~~La-----r~GVg~i~LvD~D 44 (231)
T cd00755 8 KLRNAHVAVVG-LGGVGSWAAEALA-----RSGVGKLTLIDFD 44 (231)
T ss_pred HHhCCCEEEEC-CCHHHHHHHHHHH-----HcCCCEEEEECCC
Confidence 33567899998 8999999999999 4665 47777754
No 489
>PRK07417 arogenate dehydrogenase; Reviewed
Probab=91.76 E-value=0.24 Score=40.87 Aligned_cols=33 Identities=36% Similarity=0.505 Sum_probs=29.3
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
+|.|+| .|.+|+.++..|. ..|++|++++|++.
T Consensus 2 ~I~IIG-~G~mG~sla~~L~-----~~g~~V~~~d~~~~ 34 (279)
T PRK07417 2 KIGIVG-LGLIGGSLGLDLR-----SLGHTVYGVSRRES 34 (279)
T ss_pred eEEEEe-ecHHHHHHHHHHH-----HCCCEEEEEECCHH
Confidence 588898 8999999999999 57899999998764
No 490
>PRK08410 2-hydroxyacid dehydrogenase; Provisional
Probab=91.73 E-value=0.96 Score=38.06 Aligned_cols=36 Identities=22% Similarity=0.035 Sum_probs=31.7
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
-.+|++.|.| .|-||+.+++.|. .-|.+|++.+|..
T Consensus 143 L~gktvGIiG-~G~IG~~vA~~~~-----~fgm~V~~~d~~~ 178 (311)
T PRK08410 143 IKGKKWGIIG-LGTIGKRVAKIAQ-----AFGAKVVYYSTSG 178 (311)
T ss_pred cCCCEEEEEC-CCHHHHHHHHHHh-----hcCCEEEEECCCc
Confidence 4579999998 8999999999998 7899999998853
No 491
>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]
Probab=91.66 E-value=0.76 Score=38.93 Aligned_cols=36 Identities=36% Similarity=0.353 Sum_probs=32.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|+| .|-||+++++.|. .-|.+|...+|++.
T Consensus 145 ~gktvGIiG-~GrIG~avA~r~~-----~Fgm~v~y~~~~~~ 180 (324)
T COG1052 145 RGKTLGIIG-LGRIGQAVARRLK-----GFGMKVLYYDRSPN 180 (324)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHh-----cCCCEEEEECCCCC
Confidence 479999998 9999999999998 78899999999875
No 492
>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain. It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....
Probab=91.64 E-value=0.3 Score=33.06 Aligned_cols=34 Identities=35% Similarity=0.368 Sum_probs=27.5
Q ss_pred eEEEEcCCChHHHHHHHHhhCCCCCCCC---cEEEEE-eCCCCC
Q 028258 11 VALIIGVTGISGLSLAEALKNPTTPGSP---WKVYGA-ARRPPP 50 (211)
Q Consensus 11 ~ilVtGatG~iG~~l~~~L~~~~~~~~g---~~V~~~-~R~~~~ 50 (211)
+|.|+| +|-+|++|++.|+ +.| ++|+.. +|++++
T Consensus 1 kI~iIG-~G~mg~al~~~l~-----~~g~~~~~v~~~~~r~~~~ 38 (96)
T PF03807_consen 1 KIGIIG-AGNMGSALARGLL-----ASGIKPHEVIIVSSRSPEK 38 (96)
T ss_dssp EEEEES-TSHHHHHHHHHHH-----HTTS-GGEEEEEEESSHHH
T ss_pred CEEEEC-CCHHHHHHHHHHH-----HCCCCceeEEeeccCcHHH
Confidence 466775 9999999999999 577 888855 887764
No 493
>PRK09880 L-idonate 5-dehydrogenase; Provisional
Probab=91.60 E-value=0.27 Score=41.51 Aligned_cols=75 Identities=16% Similarity=0.040 Sum_probs=45.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCCCCC-CCCCceeEEEeeCCCHHHHHHHHHhcccccce
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPPGWF-PTALVDRYITFDALDPTDTALKLSLISQEITN 85 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~~~~-~~~~~~~~i~~Dl~d~~~~~~~~~~~~~~~~~ 85 (211)
..++++|+|+ |.+|...+..+. ..|. +|+++++++.+... ..-+.+ . ..|..+. ++.+..+... .+|.
T Consensus 169 ~g~~VlV~G~-G~vG~~aiqlak-----~~G~~~Vi~~~~~~~~~~~a~~lGa~-~-vi~~~~~-~~~~~~~~~g-~~D~ 238 (343)
T PRK09880 169 QGKRVFVSGV-GPIGCLIVAAVK-----TLGAAEIVCADVSPRSLSLAREMGAD-K-LVNPQND-DLDHYKAEKG-YFDV 238 (343)
T ss_pred CCCEEEEECC-CHHHHHHHHHHH-----HcCCcEEEEEeCCHHHHHHHHHcCCc-E-EecCCcc-cHHHHhccCC-CCCE
Confidence 3578999986 999999998877 6787 58888887654221 112233 2 2344332 2333322212 2788
Q ss_pred EEeeccc
Q 028258 86 LFWVPLQ 92 (211)
Q Consensus 86 v~~~a~~ 92 (211)
+|.+.+.
T Consensus 239 vid~~G~ 245 (343)
T PRK09880 239 SFEVSGH 245 (343)
T ss_pred EEECCCC
Confidence 8887763
No 494
>PRK08293 3-hydroxybutyryl-CoA dehydrogenase; Validated
Probab=91.60 E-value=0.34 Score=40.11 Aligned_cols=34 Identities=15% Similarity=0.058 Sum_probs=30.1
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++|.|+| +|.+|+.++..|+ ..|++|+++++++.
T Consensus 4 ~kIaViG-aG~mG~~iA~~la-----~~G~~V~l~d~~~~ 37 (287)
T PRK08293 4 KNVTVAG-AGVLGSQIAFQTA-----FHGFDVTIYDISDE 37 (287)
T ss_pred cEEEEEC-CCHHHHHHHHHHH-----hcCCeEEEEeCCHH
Confidence 5789998 6999999999999 68999999998764
No 495
>cd08293 PTGR2 Prostaglandin reductase. Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid
Probab=91.55 E-value=0.28 Score=41.17 Aligned_cols=36 Identities=14% Similarity=0.149 Sum_probs=30.9
Q ss_pred CeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCCCCC
Q 028258 10 SVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARRPPP 50 (211)
Q Consensus 10 ~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~~~~ 50 (211)
+++||+||+|.+|..+++.+. ..|. +|+++++++++
T Consensus 156 ~~VlI~ga~g~vG~~aiqlAk-----~~G~~~Vi~~~~s~~~ 192 (345)
T cd08293 156 QTMVVSGAAGACGSLAGQIGR-----LLGCSRVVGICGSDEK 192 (345)
T ss_pred CEEEEECCCcHHHHHHHHHHH-----HcCCCEEEEEcCCHHH
Confidence 689999999999999998777 6888 79998887653
No 496
>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E. coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.
Probab=91.54 E-value=0.31 Score=38.29 Aligned_cols=35 Identities=29% Similarity=0.192 Sum_probs=29.3
Q ss_pred CCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCc-EEEEEeCC
Q 028258 7 NPKSVALIIGVTGISGLSLAEALKNPTTPGSPW-KVYGAARR 47 (211)
Q Consensus 7 ~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~-~V~~~~R~ 47 (211)
..+++|+|.| .|.+|+++++.|. ..|. ++++++++
T Consensus 19 l~~~~VlviG-~GglGs~ia~~La-----~~Gv~~i~lvD~d 54 (202)
T TIGR02356 19 LLNSHVLIIG-AGGLGSPAALYLA-----GAGVGTIVIVDDD 54 (202)
T ss_pred hcCCCEEEEC-CCHHHHHHHHHHH-----HcCCCeEEEecCC
Confidence 3567899998 8999999999999 5776 58888875
No 497
>PRK13243 glyoxylate reductase; Reviewed
Probab=91.48 E-value=0.36 Score=41.00 Aligned_cols=36 Identities=25% Similarity=0.210 Sum_probs=32.0
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
.+|++.|+| .|.||+.+++.|. .-|.+|++.+|.+.
T Consensus 149 ~gktvgIiG-~G~IG~~vA~~l~-----~~G~~V~~~d~~~~ 184 (333)
T PRK13243 149 YGKTIGIIG-FGRIGQAVARRAK-----GFGMRILYYSRTRK 184 (333)
T ss_pred CCCEEEEEC-cCHHHHHHHHHHH-----HCCCEEEEECCCCC
Confidence 578999998 7999999999999 68999999998654
No 498
>PRK07574 formate dehydrogenase; Provisional
Probab=91.43 E-value=0.39 Score=41.69 Aligned_cols=35 Identities=26% Similarity=0.235 Sum_probs=31.5
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRP 48 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~ 48 (211)
.+|++.|.| .|-||+.+++.|. .-|.+|++.+|..
T Consensus 191 ~gktVGIvG-~G~IG~~vA~~l~-----~fG~~V~~~dr~~ 225 (385)
T PRK07574 191 EGMTVGIVG-AGRIGLAVLRRLK-----PFDVKLHYTDRHR 225 (385)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHH-----hCCCEEEEECCCC
Confidence 468899998 7999999999999 7899999999875
No 499
>PRK08163 salicylate hydroxylase; Provisional
Probab=91.38 E-value=0.37 Score=41.43 Aligned_cols=36 Identities=33% Similarity=0.340 Sum_probs=31.7
Q ss_pred CCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 8 PKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 8 ~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
++.+|+|+| .|-.|..++..|. ..|++|+++.|++.
T Consensus 3 ~~~~V~IvG-aGiaGl~~A~~L~-----~~g~~v~v~Er~~~ 38 (396)
T PRK08163 3 KVTPVLIVG-GGIGGLAAALALA-----RQGIKVKLLEQAAE 38 (396)
T ss_pred CCCeEEEEC-CcHHHHHHHHHHH-----hCCCcEEEEeeCcc
Confidence 457899998 8999999999999 68999999999765
No 500
>PRK06185 hypothetical protein; Provisional
Probab=91.34 E-value=0.34 Score=41.88 Aligned_cols=40 Identities=18% Similarity=0.181 Sum_probs=33.7
Q ss_pred ccCCCCCeEEEEcCCChHHHHHHHHhhCCCCCCCCcEEEEEeCCCC
Q 028258 4 QDQNPKSVALIIGVTGISGLSLAEALKNPTTPGSPWKVYGAARRPP 49 (211)
Q Consensus 4 ~~~~~~~~ilVtGatG~iG~~l~~~L~~~~~~~~g~~V~~~~R~~~ 49 (211)
|++.+...|+|.| .|..|..++..|. ..|++|+++.+++.
T Consensus 1 ~~~~~~~dV~IvG-gG~~Gl~~A~~La-----~~G~~v~liE~~~~ 40 (407)
T PRK06185 1 MAEVETTDCCIVG-GGPAGMMLGLLLA-----RAGVDVTVLEKHAD 40 (407)
T ss_pred CCccccccEEEEC-CCHHHHHHHHHHH-----hCCCcEEEEecCCc
Confidence 4555667899998 7999999999999 58999999998754
Done!