Query 028261
Match_columns 211
No_of_seqs 116 out of 1072
Neff 9.0
Searched_HMMs 29240
Date Mon Mar 25 14:15:48 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028261.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028261hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1olm_A SEC14-like protein 2; l 95.5 0.21 7.1E-06 42.0 12.1 87 23-119 281-383 (403)
2 2d7n_A Filamin-C; beta-sandwic 92.6 1.2 4.1E-05 29.3 8.7 55 62-116 21-79 (93)
3 4dzg_A PLIG; lysozyme inhibito 92.5 0.27 9.3E-06 33.8 5.6 70 25-105 23-95 (114)
4 3rgh_A Filamin-A; cell adhesio 91.5 1.7 5.8E-05 28.8 8.5 45 62-106 38-85 (100)
5 2ee9_A Filamin-B; beta-sandwic 91.3 1.1 3.6E-05 29.7 7.2 55 62-116 29-87 (95)
6 2d7p_A Filamin-C; beta-sandwic 89.8 2.5 8.4E-05 28.7 8.3 54 63-116 41-98 (112)
7 2p9r_A Alpha-2-M, alpha-2-macr 89.4 3.2 0.00011 27.3 10.2 64 40-106 15-86 (102)
8 2d7m_A Filamin-C; beta-sandwic 89.4 3.2 0.00011 28.1 8.7 55 62-116 43-101 (115)
9 2dj4_A Filamin-B; beta-sandwic 88.8 3.9 0.00013 27.4 8.9 47 62-108 42-91 (108)
10 4g9s_B Inhibitor of G-type lys 88.5 2.1 7E-05 29.0 7.1 72 22-105 18-92 (111)
11 2e9j_A Filamin-B; beta-sandwic 88.4 1.6 5.4E-05 29.9 6.5 47 62-108 53-102 (119)
12 2ee6_A Filamin-B; beta-sandwic 88.4 3.3 0.00011 27.6 8.0 44 62-106 41-86 (105)
13 3cnk_A Filamin-A; FLNA24, X-RA 88.2 3.6 0.00012 26.4 8.7 45 62-106 29-76 (89)
14 2nqc_A Filamin-C; immunoglobul 88.0 5.4 0.00019 28.1 9.9 44 62-106 75-119 (138)
15 1v05_A Filamin C; actin-bindin 87.9 3.8 0.00013 26.7 8.0 45 62-106 36-83 (96)
16 2eea_A Filamin-B; beta-sandwic 87.8 4.8 0.00016 27.3 9.3 46 62-108 51-98 (115)
17 2dmb_A Filamin-B; beta-sandwic 87.7 5.2 0.00018 27.6 9.2 55 62-116 42-100 (124)
18 3osv_A Flagellar basal-BODY RO 87.6 3.5 0.00012 29.0 8.1 57 42-106 24-91 (138)
19 2dlg_A Filamin-B; beta-sandwic 87.5 1.3 4.3E-05 29.7 5.4 54 62-115 30-87 (102)
20 2dia_A Filamin-B; beta-sandwic 86.7 3.3 0.00011 27.9 7.3 46 62-107 41-89 (113)
21 4b7l_A Filamin-B; structural p 86.7 2.9 9.8E-05 34.4 8.2 80 20-106 246-335 (347)
22 2dmc_A Filamin-B; beta-sandwic 86.6 1 3.5E-05 30.9 4.7 55 62-116 44-102 (116)
23 3c12_A FLGD, flagellar protein 85.7 7.3 0.00025 27.3 10.0 44 62-105 38-92 (138)
24 2k9u_A Gamma filamin; cytoskel 85.0 7.1 0.00024 26.5 9.7 53 62-115 48-103 (119)
25 2dic_A Filamin-B; beta-sandwic 82.7 8.3 0.00028 25.6 8.1 44 62-106 41-86 (105)
26 2w0p_A Filamin-A; alternative 82.5 7.7 0.00026 25.1 8.1 44 62-106 33-78 (94)
27 2bp3_A Filamin A; structural p 82.4 8 0.00027 25.1 9.2 44 62-106 36-81 (97)
28 2ds4_A Tripartite motif protei 82.2 8.8 0.0003 25.5 10.2 47 62-108 48-99 (113)
29 2eec_A Filamin-B; beta-sandwic 80.1 12 0.00041 25.7 9.0 54 47-106 41-95 (125)
30 2k7p_A Filamin-A; IG-like, ABP 79.6 14 0.00047 27.3 8.8 44 62-106 127-172 (188)
31 3d33_A Domain of unknown funct 77.5 11 0.00039 25.3 7.0 56 41-106 37-97 (108)
32 4fxk_A Complement C4 beta chai 76.9 20 0.0007 31.5 10.6 64 40-106 133-202 (656)
33 2d7o_A Filamin-C; beta-sandwic 76.4 5.8 0.0002 26.7 5.4 54 62-116 41-97 (111)
34 2k7q_A Filamin-A; IG-like, ABP 74.5 13 0.00043 27.5 7.3 45 62-107 127-173 (191)
35 2k8e_A UPF0339 protein YEGP; p 74.0 10 0.00035 26.5 6.2 64 37-107 10-91 (130)
36 2k7p_A Filamin-A; IG-like, ABP 72.5 9.6 0.00033 28.2 6.2 45 62-106 33-80 (188)
37 2hr0_A Complement C3 beta chai 72.1 49 0.0017 29.2 11.8 62 41-105 120-189 (645)
38 3isy_A Bsupi, intracellular pr 71.1 22 0.00076 24.4 7.5 43 40-82 16-61 (120)
39 1qfh_A Protein (gelation facto 70.7 30 0.001 25.7 10.4 45 62-107 134-181 (212)
40 3sd2_A Putative member of DUF3 69.9 18 0.00062 24.0 6.3 70 23-106 19-91 (101)
41 2di8_A Filamin-B; beta-sandwic 69.5 22 0.00076 23.7 8.7 53 63-116 42-97 (111)
42 2di9_A Filamin-B; beta-sandwic 68.9 25 0.00087 24.2 9.6 46 62-108 61-108 (131)
43 3hd7_B Syntaxin-1A; membrane p 67.6 25 0.00085 23.5 9.3 19 136-154 22-40 (109)
44 1wlh_A Gelation factor; ABP-12 67.4 16 0.00056 29.0 7.0 45 63-108 234-281 (311)
45 3irp_X URO-adherence factor A; 64.2 9.6 0.00033 32.3 5.1 43 63-105 330-372 (429)
46 3gf8_A Putative polysaccharide 63.4 4.6 0.00016 32.4 2.9 72 34-105 7-84 (296)
47 2dib_A Filamin-B; beta-sandwic 61.6 15 0.00052 25.1 5.1 47 62-108 56-105 (128)
48 3hrz_A Cobra venom factor; ser 60.5 36 0.0012 30.1 8.5 63 41-106 118-183 (627)
49 1gl2_D Syntaxin 8, vesicle tra 57.1 24 0.00084 21.0 4.8 45 136-180 10-54 (65)
50 2j3s_A Filamin-A; cytoskeleton 55.0 74 0.0025 24.9 8.7 44 62-106 227-272 (288)
51 2nps_D Syntaxin-6; vesicle fus 54.9 37 0.0013 21.3 6.3 46 135-180 19-64 (82)
52 2k7q_A Filamin-A; IG-like, ABP 54.8 22 0.00077 26.1 5.3 45 62-106 30-77 (191)
53 1wlh_A Gelation factor; ABP-12 53.9 55 0.0019 25.8 7.9 45 62-106 142-189 (311)
54 2lif_A Core protein P21; signa 58.4 2.8 9.6E-05 20.8 0.0 20 4-23 6-25 (27)
55 1qle_D Cytochrome AA3, ccytoch 52.4 28 0.00095 19.2 4.5 28 168-195 13-40 (43)
56 1qfh_A Protein (gelation facto 51.6 71 0.0024 23.6 8.1 45 62-106 43-90 (212)
57 3jqw_A COLH protein, collagena 51.3 55 0.0019 22.3 12.4 71 28-107 35-106 (121)
58 3pay_A Putative adhesin; struc 51.0 6.4 0.00022 31.8 1.8 71 34-105 6-84 (314)
59 3cu7_A Complement C5; Mg domai 50.7 55 0.0019 32.6 8.6 63 41-106 138-207 (1676)
60 2b39_A C3; thioester, immune d 49.7 77 0.0026 31.5 9.5 62 41-105 141-210 (1661)
61 2pn5_A TEP1R, thioester-contai 49.2 70 0.0024 30.9 9.0 64 41-105 114-184 (1325)
62 1m56_D Cytochrome C oxidase; m 48.0 38 0.0013 19.4 5.0 29 168-196 21-49 (51)
63 3c75_A Amicyanin; copper prote 46.9 61 0.0021 22.1 6.2 16 85-100 102-117 (132)
64 2x5p_A FBA2, fibronectin bindi 44.5 32 0.0011 23.5 4.3 39 64-104 44-82 (121)
65 3fn2_A Putative sensor histidi 43.8 29 0.00099 23.0 3.7 39 66-104 51-92 (106)
66 3prx_B Cobra venom factor; imm 42.3 1.2E+02 0.0039 30.4 9.3 44 62-105 158-204 (1642)
67 2xwx_A GBPA, glcnac-binding pr 41.2 1.5E+02 0.0053 24.5 10.1 47 62-108 324-376 (391)
68 4acq_A Alpha-2-macroglobulin; 39.1 2.9E+02 0.0099 27.2 11.5 62 41-105 118-187 (1451)
69 2q0z_X Protein Pro2281; SEC63, 38.1 1.5E+02 0.0053 23.7 9.3 46 62-107 264-314 (339)
70 1jcd_A Major outer membrane li 35.6 64 0.0022 18.5 6.0 27 137-163 6-32 (52)
71 3e8v_A Possible transglutamina 32.5 96 0.0033 19.6 7.2 55 47-103 4-68 (82)
72 3ogl_Q JAZ1 incomplete degron 32.0 17 0.00059 16.8 0.9 10 200-209 9-18 (21)
73 4hci_A Cupredoxin 1; structura 31.0 1E+02 0.0035 19.5 5.8 17 85-101 68-85 (100)
74 3afg_A Subtilisin-like serine 30.1 2.7E+02 0.0091 24.0 13.1 47 62-108 458-506 (539)
75 2r5o_A Putative ATP binding co 30.0 44 0.0015 24.4 3.4 18 63-80 87-104 (188)
76 2akf_A Coronin-1A; coiled coil 28.8 60 0.0021 16.1 4.4 19 138-156 2-20 (32)
77 1sfc_D Protein (SNAP-25B), pro 26.6 1.2E+02 0.0043 19.1 6.0 45 136-180 30-74 (87)
78 1n7s_D SNAP-25A; neuronal snar 26.4 1E+02 0.0036 18.1 6.0 45 136-180 11-55 (66)
79 2yko_A LINE-1 ORF1P; RNA-bindi 26.2 1.7E+02 0.0057 22.5 6.0 39 137-175 8-46 (233)
80 4ank_A Transthyretin; hormone 26.2 86 0.003 22.2 4.2 58 46-106 32-97 (147)
81 3bid_A UPF0339 protein NMB1088 25.5 1.1E+02 0.0038 18.3 4.0 18 64-81 12-29 (64)
82 3u1s_H FAB PGT145 heavy chain; 22.9 1.7E+02 0.006 21.9 5.9 19 85-103 99-122 (267)
83 1f7l_A Holo-(acyl carrier prot 22.6 1.7E+02 0.0058 19.2 5.1 36 70-105 81-116 (121)
84 3swf_A CGMP-gated cation chann 22.4 1.5E+02 0.005 18.4 5.2 27 138-164 10-36 (74)
85 2k49_A UPF0339 protein SO_3888 22.4 1.9E+02 0.0064 19.6 6.9 54 46-106 3-74 (118)
86 4gym_A Glyoxalase/bleomycin re 22.1 48 0.0016 22.5 2.2 14 64-77 115-128 (149)
87 2j3s_A Filamin-A; cytoskeleton 21.9 2.8E+02 0.0096 21.4 8.9 43 63-106 37-81 (288)
88 3ogk_Q JAZ1 incomplete degron 21.5 30 0.001 16.2 0.6 10 200-209 4-13 (22)
89 1l4a_D S-SNAP25 fusion protein 21.4 1.6E+02 0.0056 18.6 4.7 44 137-180 32-75 (87)
90 2pnv_A Small conductance calci 21.3 1.1E+02 0.0039 16.7 3.2 18 139-156 20-37 (43)
91 2oxj_A Hybrid alpha/beta pepti 20.4 1E+02 0.0035 15.9 4.4 27 144-170 3-29 (34)
92 1gd2_E Transcription factor PA 20.0 95 0.0033 19.0 2.9 30 134-163 28-57 (70)
No 1
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol biosynthesis, oxidized vitamin E, lipid-binding, transport, transcription regulation; HET: VTQ; 1.95A {Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB: 1o6u_A* 1olm_E*
Probab=95.51 E-value=0.21 Score=41.96 Aligned_cols=87 Identities=10% Similarity=0.095 Sum_probs=55.0
Q ss_pred EEEEeCCCcceEEEEcC-CCcEEEEEEEEecCCCCCCCCCCceEEEEEEc-----CC---C--CeEEeeeccc----eee
Q 028261 23 RFEIQSAHTKCIAEDIK-SNSMTVGKYNVVNPNDGHPLPESHKLTVRVTS-----AY---G--NSYHYADRVD----SGQ 87 (211)
Q Consensus 23 ~f~l~~g~~~Cf~~~v~-~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~-----p~---g--~~i~~~~~~~----~g~ 87 (211)
++.|.+|+...+-..+. .|..+.=.|.+.+ .+|.+.|+= ++ | ..+....+.. -..
T Consensus 281 ~~~V~~g~~~~v~~~v~~~g~~l~W~f~~~~----------~DI~F~v~~~~~~~~~~~~~~~~~v~p~~r~~~~~~~~~ 350 (403)
T 1olm_A 281 SVQISRGSSHQVEYEILFPGCVLRWQFMSDG----------ADVGFGIFLKTKMGERQRAGEMTEVLPNQRYNSHLVPED 350 (403)
T ss_dssp EEEECTTCEEEEEEEECSTTCEEEEEEEESS----------SCEEEEEEEC----CCCCGGGSEEEEEEEEECTTTSCEE
T ss_pred EEEEcCCCEEEEEEEEcCCCCEEEEEEEecC----------CcEEEEEEEecccccccCCCcceEEeeeeeecCcccccc
Confidence 37889999999888887 5788877777732 366666651 11 1 1232221111 113
Q ss_pred EEEEeeecccEEEEEEecCCC-CceeEEEEEEE
Q 028261 88 FAFTAAEAGDYMACFWAVDHS-PQTTVTIDFDW 119 (211)
Q Consensus 88 ~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~~~~ 119 (211)
=+|.+.++|.|.++|+|+.|. ..+.+...+.+
T Consensus 351 G~~~~~~~G~y~l~fdNs~S~~~~k~l~y~v~v 383 (403)
T 1olm_A 351 GTLTCSDPGIYVLRFDNTYSFIHAKKVNFTVEV 383 (403)
T ss_dssp EEEECCSCEEEEEEEECTTCCCCSEEEEEEEEE
T ss_pred CEEEcCCCeEEEEEEeccccceeceEEEEEEEE
Confidence 346789999999999999875 34555444444
No 2
>2d7n_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=92.63 E-value=1.2 Score=29.32 Aligned_cols=55 Identities=15% Similarity=0.123 Sum_probs=37.3
Q ss_pred CceEEEEEEcCCCCeEEe-eecccee--eEEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
..++.+.|.+|+|..+.- -.+..+| ...|++++.|.|.++..-.... ......+.
T Consensus 21 ~~~l~v~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v~ 79 (93)
T 2d7n_A 21 KGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGLHQMGIKYDGNHIPGSPLQFY 79 (93)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEEEEEEEEESSSCCTTCSEEEE
T ss_pred CCCEEEEEECCCCCccceEEEECCCCEEEEEEEccCCEEEEEEEEECCEeCCCCCeEEE
Confidence 458999999999986532 1223455 4557888999999999876654 33444444
No 3
>4dzg_A PLIG; lysozyme inhibitor, G-type lysozyme binding, hydrolase inhib; HET: MLY; 2.02A {Aeromonas hydrophila subsp}
Probab=92.54 E-value=0.27 Score=33.81 Aligned_cols=70 Identities=10% Similarity=0.056 Sum_probs=49.8
Q ss_pred EEeCCCcceEEEEcCCCcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCe---EEeeeccceeeEEEEeeecccEEEE
Q 028261 25 EIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNS---YHYADRVDSGQFAFTAAEAGDYMAC 101 (211)
Q Consensus 25 ~l~~g~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~---i~~~~~~~~g~~~f~~~~~G~y~~C 101 (211)
.|.+++...+...+.+|+.+.+.. ++ +..+.+.|.+|+|+. ++..+....+.|+-+.+.+|.|++=
T Consensus 23 ~I~g~~~~~Y~~~a~aGQ~l~V~l---s~--------~~~~~f~I~~P~~~~~~~l~~g~~~~~~~~~g~LP~sG~Y~i~ 91 (114)
T 4dzg_A 23 SFTGYDTIHYTLVAXAGQTMTVXI---GG--------SSNANFNVFAPGAQPGQAEAIGRNDGDGQWQGALPASGXYLIQ 91 (114)
T ss_dssp CCBTTCCEEEECCC-CCCEEEC-C---EE--------STTCEEEEECTTCCTTTSCCSEECCTTSCCEEECSSCC-CEEE
T ss_pred EecCCCceEEEEEecCCCEEEEEe---CC--------CCcEEEEEECCCCCcccceeccccCCcceEEEEecCCCcEEEE
Confidence 577788888888899999987775 22 235667889999873 3443333346888899999999999
Q ss_pred EEec
Q 028261 102 FWAV 105 (211)
Q Consensus 102 f~n~ 105 (211)
....
T Consensus 92 V~~~ 95 (114)
T 4dzg_A 92 VYQM 95 (114)
T ss_dssp EECC
T ss_pred EEec
Confidence 8876
No 4
>3rgh_A Filamin-A; cell adhesion, cytoskeleton-complex, disease mutation, immun like, cytoskeleton, actin-binding, cell junction, shape; HET: CME; 2.44A {Homo sapiens} SCOP: b.1.18.0
Probab=91.45 E-value=1.7 Score=28.80 Aligned_cols=45 Identities=18% Similarity=0.217 Sum_probs=29.7
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceee--EEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQ--FAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|+|..+.- -.+..+|. .+|+++..|.|.+...-..
T Consensus 38 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~V~Y~p~~~G~y~i~V~~~g 85 (100)
T 3rgh_A 38 SAELTIEICSEAGLPAEVYIQDHGDGTHTITYIPLCPGAYTVTIKYGG 85 (100)
T ss_dssp SCCEEEEEECTTSCBCEEEEEECSSSEEEEEEECCSSEEEEEEEEETT
T ss_pred CceEEEEEECCCCCEeEEEEEeCCCCEEEEEEEeCCCeeEEEEEEECC
Confidence 457899999999865422 22334554 4567788898888866543
No 5
>2ee9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=91.31 E-value=1.1 Score=29.74 Aligned_cols=55 Identities=13% Similarity=0.128 Sum_probs=36.8
Q ss_pred CceEEEEEEcCCCCeEEe-eecccee--eEEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
..++.+.|.+|+|+.+.- -.+..+| ...|++++.|.|+++..-.... ++....+.
T Consensus 29 ~~~ltv~V~~PsG~~~~~~v~d~~dGtY~v~ytP~e~G~h~v~V~~~G~~I~GSPF~v~ 87 (95)
T 2ee9_A 29 KGEITGEVHMPSGKTATPEIVDNKDGTVTVRYAPTEVGLHEMHIKYMGSHIPESPLQFY 87 (95)
T ss_dssp TTSEEEEEECTTSCEECCEEEECSSSCEEEECCCCSSEEEEEEEEESSCBCTTCSEEEE
T ss_pred CCCEEEEEECCCCCccccEEEeCCCCeEEEEEEecCCEeEEEEEEECCEECCCCCeEEE
Confidence 458999999999976532 1223355 4457788999999998876544 33444443
No 6
>2d7p_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10 PDB: 2eeb_A
Probab=89.82 E-value=2.5 Score=28.74 Aligned_cols=54 Identities=19% Similarity=0.166 Sum_probs=35.4
Q ss_pred ceEEEEEEcCCCCeEEee-ecccee--eEEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 63 HKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
..+.+.|.+|+|..+--. .+..+| ..+|++++.|.|.+...-.... ......+.
T Consensus 41 g~l~v~V~~P~g~~~~~~v~d~~~gty~v~ytP~~~G~h~v~V~~~g~~I~GSPF~v~ 98 (112)
T 2d7p_A 41 GVIDARVHTPSGAVEECYVSELDSDKHTIRFIPHENGVHSIDVKFNGAHIPGSPFKIR 98 (112)
T ss_dssp SCEEEEEECSSSCBCCCEECSCBTTEEEEEECCSSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CCEEEEEECCCCCeeeeEEEeCCCCeEEEEEEcCCCEeEEEEEEECCeEcCCCCEEEE
Confidence 488999999999754321 222344 4557888999999998866544 33344443
No 7
>2p9r_A Alpha-2-M, alpha-2-macroglobulin; human alpha2-macroglobulin, Mg2 domain, X-RAY, signaling protein; 2.30A {Homo sapiens}
Probab=89.41 E-value=3.2 Score=27.29 Aligned_cols=64 Identities=14% Similarity=0.081 Sum_probs=39.9
Q ss_pred CCcEEEEEEEEecCCCCCCCCCC-ceEEEEEEcCCCCeEEeeecc--ceeeEE--EEee---ecccEEEEEEecC
Q 028261 40 SNSMTVGKYNVVNPNDGHPLPES-HKLTVRVTSAYGNSYHYADRV--DSGQFA--FTAA---EAGDYMACFWAVD 106 (211)
Q Consensus 40 ~~~~i~~~y~v~~~~~~~~~~~~-~~i~~~v~~p~g~~i~~~~~~--~~g~~~--f~~~---~~G~y~~Cf~n~~ 106 (211)
.|+.+.+..-+.+.+. .|.+ ..+.+.+.||+|+.+.++... ..|.++ |..+ ..|.|++......
T Consensus 15 PGetV~~~~~~~~~~~---~p~~~~~~~v~l~dp~g~~v~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~i~~~~~~ 86 (102)
T 2p9r_A 15 PGQTVKFRVVSMDENF---HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKKS 86 (102)
T ss_dssp TTCEEEEEEEEECGGG---CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECTT
T ss_pred CCCEEEEEEEEECCCC---cCCCCCceEEEEECCCCCEEEEEEeecCCCCEEEEEEECCCCCCCeeEEEEEEECC
Confidence 3677766655554432 1222 347899999999998775322 244443 4442 4799999988643
No 8
>2d7m_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=89.40 E-value=3.2 Score=28.13 Aligned_cols=55 Identities=16% Similarity=0.253 Sum_probs=35.7
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceeeE--EEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQF--AFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~~--~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
...+.+.|.+|+|..+.. -.+..+|.| +|++++.|.|.+...-.... ......+.
T Consensus 43 ~~~l~V~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~I~gSPF~v~ 101 (115)
T 2d7m_A 43 EGLLTVQILDPEGKPKKANIRDNGDGTYTVSYLPDMSGRYTITIKYGGDEIPYSPFRIH 101 (115)
T ss_dssp SSCEEEEEECTTSCBCCEEEEECSSSCEEEEECCCSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CCEEEEEEECCCCCeeeeEEEECCCCEEEEEEEeCCCceEEEEEEECCEECCCCCEEEE
Confidence 457899999999865422 222345544 47778999999998876544 23334443
No 9
>2dj4_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=88.78 E-value=3.9 Score=27.37 Aligned_cols=47 Identities=23% Similarity=0.273 Sum_probs=32.5
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceeeEE--EEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQFA--FTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~~~--f~~~~~G~y~~Cf~n~~~~ 108 (211)
...+.+.|.+|+|..+.- -.+..+|.|. |++++.|.|.+...-....
T Consensus 42 ~~~l~V~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~ 91 (108)
T 2dj4_A 42 LAPLEVRVLGPRGLVEPVNVVDNGDGTHTVTYTPSQEGPYMVSVKYADEE 91 (108)
T ss_dssp SCCEEEEEECSSSCEECCCCEECSSSEEEEEECCSSCEEEEEEEEESSSB
T ss_pred CceEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCeeEEEEEEECCEE
Confidence 468999999999965422 1223455444 7778899999998866543
No 10
>4g9s_B Inhibitor of G-type lysozyme, goose-type lysozyme; hydrolase inhibitor, hydrolase-hydrolase inhibitor; HET: FLC; 0.95A {Escherichia coli} PDB: 4dy3_A* 4dxz_A* 4dy5_A
Probab=88.51 E-value=2.1 Score=29.02 Aligned_cols=72 Identities=8% Similarity=-0.089 Sum_probs=50.6
Q ss_pred EEEEEeCCCcceEEEEcCCCcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEee---eccceeeEEEEeeecccE
Q 028261 22 LRFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYA---DRVDSGQFAFTAAEAGDY 98 (211)
Q Consensus 22 l~f~l~~g~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~---~~~~~g~~~f~~~~~G~y 98 (211)
+.=.|.+++...+...+.+|+.+++.. ..+ +..+.+..|.+...... ......++..+.+.+|+|
T Consensus 18 v~G~I~g~~~~~Y~~~a~aGQ~l~v~l--~s~----------~~~~~i~~pg~~~~~~~~~~~~~~~~~~~~~LP~sG~Y 85 (111)
T 4g9s_B 18 YSGEIKGYDYDTYTFYAKKGQKVHVSI--SNE----------GADTYLFGPGIDDSVDLSRYSPELDSHGQYSLPASGKY 85 (111)
T ss_dssp EEEEEETTCCEEEEEEECTTCEEEEEE--SCT----------TCEEEEECTTCSSCEECSTTCTTCCTTSCEECSSSEEE
T ss_pred EEEEEeCCCceEEEEEecCCCEEEEEE--ecC----------CccEEEECCCCccccccccccccCCceEEEEecCCccE
Confidence 444788899999999999999998764 222 23566888876543221 122245678889999999
Q ss_pred EEEEEec
Q 028261 99 MACFWAV 105 (211)
Q Consensus 99 ~~Cf~n~ 105 (211)
++=....
T Consensus 86 ~I~V~~~ 92 (111)
T 4g9s_B 86 ELRVLQT 92 (111)
T ss_dssp EEEEECC
T ss_pred EEEEEec
Confidence 9998743
No 11
>2e9j_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.38 E-value=1.6 Score=29.92 Aligned_cols=47 Identities=17% Similarity=0.277 Sum_probs=31.7
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceeeE--EEEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQF--AFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~~--~f~~~~~G~y~~Cf~n~~~~ 108 (211)
...+.+.|.+|+|..+.- -.+..+|.| +|+++..|.|.+...-....
T Consensus 53 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~~ 102 (119)
T 2e9j_A 53 EGLLAVQITDQEGKPKRAIVHDNKDGTYAVTYIPDKTGRYMIGVTYGGDD 102 (119)
T ss_dssp CCCEECCEECTTCCCCCEEEEECCSSEEEEEECCCSCSEEEECCEESSCB
T ss_pred CCeEEEEEECCCCCEEEEEEEECCCCEEEEEEEeCCCEEEEEEEEECCEE
Confidence 457899999999864422 122345544 47778899999988765543
No 12
>2ee6_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=88.36 E-value=3.3 Score=27.60 Aligned_cols=44 Identities=20% Similarity=0.277 Sum_probs=32.2
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|++..+ +-.+..+| ..+|+++.+|.|.++..-..
T Consensus 41 ~~~l~v~v~~p~~~~v-~v~d~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2ee6_A 41 AGGLSIAVEGPSKAEI-TFDDHKNGSCGVSYIAQEPGNYEVSIKFND 86 (105)
T ss_dssp CCCEEEEEESSSCEEE-EECCCCSSCCCEEEEESSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEE-EEEECCCCEEEEEEEECCCceEEEEEEECC
Confidence 4578899999998655 32333455 56688889999999988654
No 13
>3cnk_A Filamin-A; FLNA24, X-RAY crystalography, homodimer, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; 1.65A {Homo sapiens}
Probab=88.20 E-value=3.6 Score=26.35 Aligned_cols=45 Identities=16% Similarity=0.156 Sum_probs=29.1
Q ss_pred CceEEEEEEcCCCCeEE-eeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYH-YADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~-~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
+..+.+.|.+|+|..+. +-.+..+| ..+|++++.|.|.+...-..
T Consensus 29 ~~~l~v~v~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 76 (89)
T 3cnk_A 29 NNMLLVGVHGPRTPCEEILVKHVGSRLYSVSYLLKDKGEYTLVVKWGH 76 (89)
T ss_dssp SCCEEEEEECSSSCCSEEEEEEEETTEEEEEEECCSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCceeEEEEECCCCEEEEEEEECCCccEEEEEEECC
Confidence 45788899999985321 11222344 44477788899988877554
No 14
>2nqc_A Filamin-C; immunoglobulin, metal binding, immune system; 2.05A {Homo sapiens} SCOP: b.1.18.10 PDB: 2d7q_A 2k3t_A
Probab=88.02 E-value=5.4 Score=28.15 Aligned_cols=44 Identities=16% Similarity=0.259 Sum_probs=31.0
Q ss_pred CceEEEEEEcCCCCeEEeeecccee-eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG-QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|++..+.-.+ ..+| ..+|+++++|.|.+...-..
T Consensus 75 ~g~l~v~I~gPs~~~~~~~d-~~dGy~V~YtP~~~G~y~I~Vk~~g 119 (138)
T 2nqc_A 75 SGALSVTIDGPSKVQLDCRE-CPEGHVVTYTPMAPGNYLIAIKYGG 119 (138)
T ss_dssp SCCEEEEEESSSCCEEEEEE-ETTEEEEEEECCSCEEEEEEEEESS
T ss_pred CCcEEEEEECCCCCeeeEEE-CCCcEEEEEEcCCCEEEEEEEEECC
Confidence 45789999999987553322 2345 44577789999998877655
No 15
>1v05_A Filamin C; actin-binding protein, immunoglobulin; 1.43A {Homo sapiens} SCOP: b.1.18.10 PDB: 2eed_A
Probab=87.93 E-value=3.8 Score=26.66 Aligned_cols=45 Identities=20% Similarity=0.279 Sum_probs=29.1
Q ss_pred CceEEEEEEcCCCCeEE-eeeccceee--EEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYH-YADRVDSGQ--FAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~-~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|+|..+. +-.+..+|. .+|++++.|.|.+...-..
T Consensus 36 ~~~l~v~v~~p~~~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g 83 (96)
T 1v05_A 36 TNMMMVGVHGPKTPCEEVYVKHMGNRVYNVTYTVKEKGDYILIVKWGD 83 (96)
T ss_dssp SCCEEEEEECSSSCCSEEEEEECSTTEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeEEEEEeCCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 45788899999985321 112233454 4467788899988877554
No 16
>2eea_A Filamin-B; beta-sandwich, immunoglobulin-like fold, interaction with GP1BA, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=87.81 E-value=4.8 Score=27.25 Aligned_cols=46 Identities=13% Similarity=0.147 Sum_probs=32.2
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~ 108 (211)
...+.+.|.+|++..+. -.+..+| ..+|+++.+|.|.+...-....
T Consensus 51 ~~~l~v~v~~p~~~~~~-v~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~ 98 (115)
T 2eea_A 51 EGGLDLAIEGPSKAEIS-CIDNKDGTCTVTYLPTLPGDYSILVKYNDKH 98 (115)
T ss_dssp SSCEEEEEESSSCCEEC-CBCCSSSEEEEEEECSSCSCEEEEEEESSSB
T ss_pred CCceEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeeEEEEEEECCEE
Confidence 45789999999985442 2333456 4557888999999998865433
No 17
>2dmb_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.70 E-value=5.2 Score=27.58 Aligned_cols=55 Identities=22% Similarity=0.281 Sum_probs=35.9
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceee--EEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQ--FAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
...+.+.|.+|+|..+.. -.+..+|. ..|++++.|.|+++..-.... ......+.
T Consensus 42 ~~~l~V~I~~p~g~~v~~~v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 100 (124)
T 2dmb_A 42 KGKVTCTVLTPDGTEAEADVIENEDGTYDIFYTAAKPGTYVIYVRFGGVDIPNSPFTVM 100 (124)
T ss_dssp SCCEEEEEECTTSCBCCCEEEECTTSCEEEEEECSSCEEEEEEEEESSCBCTTCSEEEE
T ss_pred CCcEEEEEECCCCCEEeeEEEeCCCCEEEEEEEcCCCEEEEEEEEECCEECCCCCeEEE
Confidence 458899999999865432 12234554 457888999999998876544 33344443
No 18
>3osv_A Flagellar basal-BODY ROD modification protein FLG; FLGD, flagellum, P. aeruginosa, structural protein; 2.35A {Pseudomonas aeruginosa}
Probab=87.56 E-value=3.5 Score=29.02 Aligned_cols=57 Identities=16% Similarity=0.110 Sum_probs=40.9
Q ss_pred cEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeee--ccceeeEEEEee---------ecccEEEEEEecC
Q 028261 42 SMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYAD--RVDSGQFAFTAA---------EAGDYMACFWAVD 106 (211)
Q Consensus 42 ~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~~ 106 (211)
....+.|.+..+ ...+.+.|+|.+|+++++.. ..+.|.+.|... .+|.|++-.....
T Consensus 24 ~~~~~~~~l~~~--------a~~v~v~I~d~~G~~V~t~~~g~~~aG~~~f~WDG~d~~G~~~~~G~Y~~~v~a~~ 91 (138)
T 3osv_A 24 DTFKASLNLPVS--------SSNVWVNVYDDKGTVVNRINLGQQAAGSVSFMWDGKDSSGNIMPPGTYKFEAQTSI 91 (138)
T ss_dssp SCEEEEEEESBC--------EEEEEEEEECTTSCEEEEEEEEEECSEEEEEEECSBCTTSCBCCSEEEEEEEEEEE
T ss_pred CeEEEEEECCCC--------CcEEEEEEEcCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCccEEEEEEEEc
Confidence 346677776433 35899999999999998743 345677777663 2689999987664
No 19
>2dlg_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=87.52 E-value=1.3 Score=29.72 Aligned_cols=54 Identities=15% Similarity=0.129 Sum_probs=36.3
Q ss_pred CceEEEEEEcCCCCeEEee-eccceeeE--EEEeeecccEEEEEEecCCC-CceeEEE
Q 028261 62 SHKLTVRVTSAYGNSYHYA-DRVDSGQF--AFTAAEAGDYMACFWAVDHS-PQTTVTI 115 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~-~~~~~g~~--~f~~~~~G~y~~Cf~n~~~~-~~~~v~v 115 (211)
..++.+.|.+|+|..+--. .+..+|.| +|++++.|.|.+...-.... +.....+
T Consensus 30 ~~~l~v~v~~P~G~~~~~~v~d~~dGty~v~ytP~e~G~h~v~V~~~g~~I~GSPF~v 87 (102)
T 2dlg_A 30 SSDMSAHVTSPSGRVTEAEIVPMGKNSHCVRFVPQEMGVHTVSVKYRGQHVTGSPFQF 87 (102)
T ss_dssp GGGCEEEEECTTSCEEECEEEECSSSEEEEEBCCCTTCEEEEEEESSSSBCSSCSEEE
T ss_pred CCCEEEEEECCCCCEeeeEEEECCCCEEEEEEEecCCEeEEEEEEECCEeCCCCCeEE
Confidence 4689999999999765332 22345544 47888999999998866544 3334433
No 20
>2dia_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.72 E-value=3.3 Score=27.93 Aligned_cols=46 Identities=15% Similarity=0.171 Sum_probs=31.5
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceee--EEEEeeecccEEEEEEecCC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQ--FAFTAAEAGDYMACFWAVDH 107 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~ 107 (211)
...+.+.|.+|+|..+.. -.+..+|. .+|+++..|.|++...-...
T Consensus 41 ~~~l~v~i~~~~g~~~~~~v~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 89 (113)
T 2dia_A 41 PGALGLEAVSDSGTKAEVSIQNNKDGTYAVTYVPLTAGMYTLTMKYGGE 89 (113)
T ss_dssp SCCEEEEEEETTTEECEEEEEECTTSEEEEEEECSSCEEEEEEEEETTE
T ss_pred CccEEEEEECCCCCEeeEEEEECCCCEEEEEEEeCCCccEEEEEEECCE
Confidence 457889999998854422 23334564 45788899999999886543
No 21
>4b7l_A Filamin-B; structural protein, FR 1 filamin hinge ABD-1; 2.05A {Homo sapiens} PDB: 2wfn_A
Probab=86.70 E-value=2.9 Score=34.41 Aligned_cols=80 Identities=14% Similarity=0.192 Sum_probs=48.7
Q ss_pred eeEEEEEeCCCcceEEEEcCC-----CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEE---eeeccceeeE--E
Q 028261 20 QSLRFEIQSAHTKCIAEDIKS-----NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYH---YADRVDSGQF--A 89 (211)
Q Consensus 20 ~~l~f~l~~g~~~Cf~~~v~~-----~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~---~~~~~~~g~~--~ 89 (211)
..+.-...|.+-+|+.--+.. |... .|.|...++| ...+.+.|.+|+|..+- +..+..+|.| +
T Consensus 246 ~~l~~k~~pskv~a~GpGle~~g~~vg~p~--~F~Vdt~~AG-----~g~l~v~V~~P~G~~~~~~v~~~~~~~gty~v~ 318 (347)
T 4b7l_A 246 APLKPKLNPKKARAYGRGIEPTGNMVKQPA--KFTVDTISAG-----QGDVMVFVEDPEGNKEEAQVTPDSDKNKTYSVE 318 (347)
T ss_dssp CCCCCSCCGGGCEEESGGGSSSCCCTTSCE--EEEEECTTTC-----SCCEEEEEECTTSCEEECEEEESSTTCSEEEEE
T ss_pred ccccccccccceeEEeccccccCceeCCEE--EEEEEeCCCC-----CCceEEEEECCCCCeecCEEEEEcCCCCEEEEE
Confidence 344445555666666655542 2333 5555443322 45899999999997553 2233345644 5
Q ss_pred EEeeecccEEEEEEecC
Q 028261 90 FTAAEAGDYMACFWAVD 106 (211)
Q Consensus 90 f~~~~~G~y~~Cf~n~~ 106 (211)
|++++.|.|.+-..-..
T Consensus 319 y~P~~~G~~~I~V~~~g 335 (347)
T 4b7l_A 319 YLPKVTGLHKVTVLFAG 335 (347)
T ss_dssp ECCCSSSEEEEEEEETT
T ss_pred EEECCCEeEEEEEEECC
Confidence 88889999998876554
No 22
>2dmc_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=86.60 E-value=1 Score=30.89 Aligned_cols=55 Identities=16% Similarity=0.256 Sum_probs=36.0
Q ss_pred CceEEEEEEcCCCCeEEe-eecccee--eEEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
...+.+.|.+|+|..+-. -.+..+| ..+|++++.|+|.+...-.... +.....+.
T Consensus 44 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~e~G~h~v~V~~~g~~I~GSPF~v~ 102 (116)
T 2dmc_A 44 LSSLTASIKAPSGRDEPCLLKRLPNNHIGISFIPREVGEHLVSIKKNGNHVANSPVSIM 102 (116)
T ss_dssp STTBCCEEECTTSCBCCEEEEEETTTEEEEEECCCSCEEEEEECBBSSSBCTTCSEEEE
T ss_pred CCCEEEEEECCCCCEEeeEEEeCCCCeEEEEEEeCCCeeEEEEEEECCEECCCCCeEEE
Confidence 457899999999975422 1222344 4568889999999998866544 33444443
No 23
>3c12_A FLGD, flagellar protein; HOOK capping, IG-like domain, FN-III domain, tudor-like domain, flagellar biogenesis, flagellum; 2.51A {Xanthomonas campestris PV}
Probab=85.67 E-value=7.3 Score=27.29 Aligned_cols=44 Identities=18% Similarity=0.203 Sum_probs=34.3
Q ss_pred CceEEEEEEcCCCCeEEeee--ccceeeEEEEee---------ecccEEEEEEec
Q 028261 62 SHKLTVRVTSAYGNSYHYAD--RVDSGQFAFTAA---------EAGDYMACFWAV 105 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~--~~~~g~~~f~~~---------~~G~y~~Cf~n~ 105 (211)
...+.+.|+|.+|+++++.. ..+.|.+.|... .+|.|++.+...
T Consensus 38 a~~v~v~I~d~~G~~V~t~~~~~~~aG~~~~~WDg~d~~G~~~~~G~Y~~~v~a~ 92 (138)
T 3c12_A 38 AGFVNFEITDANGTFVKQLSVPASAAGEVSFAWDGTDANGNRMAAGKYGITATQT 92 (138)
T ss_dssp SEEEEEEEECSSCCEEEEEEEEESSSEEEEEEECSBCTTSCBCCSEEEEEEEEEE
T ss_pred CCEEEEEEEeCCCCEEEEEEcCCcCCceEEEEECCcCCCCCCCCCceEEEEEEEE
Confidence 46899999999999998753 345777777763 268999999876
No 24
>2k9u_A Gamma filamin; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=85.00 E-value=7.1 Score=26.55 Aligned_cols=53 Identities=17% Similarity=0.358 Sum_probs=35.4
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecCCC-CceeEEE
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTI 115 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v 115 (211)
...+.+.|.+|++-.+.- .+..+| ..+|+++.+|.|.+...-...+ ......+
T Consensus 48 ~~~l~v~v~~p~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v 103 (119)
T 2k9u_A 48 AGGLSIAVEGPSKAEIAF-EDRKDGSCGVSYVVQEPGDYEVSIKFNDEHIPDSPFVV 103 (119)
T ss_dssp SEEEEEEEESSSCCEEEE-ECCSSSEEEEEEECCSSEEEEEEEEETSCBCSSCSEEE
T ss_pred CCcEEEEEeCCCCCeEEE-EECCCCEEEEEEEECCCceEEEEEEECCEECCCCCEEE
Confidence 468899999998843322 334456 4557888999999998866543 3334444
No 25
>2dic_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=82.74 E-value=8.3 Score=25.56 Aligned_cols=44 Identities=16% Similarity=0.157 Sum_probs=30.4
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|.+..+.-.+ ..+| ..+|+++.+|.|.+...-..
T Consensus 41 ~g~l~v~v~gp~~~~~~v~d-~~dGty~v~Y~p~~~G~y~I~V~~~g 86 (105)
T 2dic_A 41 IGGLGITVEGPSESKINCRD-NKDGSCSAEYIPFAPGDYDVNITYGG 86 (105)
T ss_dssp SSCEEEEEESSSCCCCEEEE-CSSSCEEEEECCSSCEEEEEEEEETT
T ss_pred CCceEEEEECCCCCeEEEEE-CCCCeEEEEEEeCCCeEEEEEEEECC
Confidence 34688888999875443222 3455 45577788999999988654
No 26
>2w0p_A Filamin-A; alternative splicing, cytoskeleton/complex, phosphoprotein, disease mutation, immunoglobulin like, zinc, complex; 1.90A {Homo sapiens} SCOP: b.1.18.10 PDB: 2brq_A* 2jf1_A 3isw_A
Probab=82.52 E-value=7.7 Score=25.07 Aligned_cols=44 Identities=18% Similarity=0.294 Sum_probs=30.1
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|++..+.-. +..+| ..+|+++.+|.|.+...-..
T Consensus 33 ~~~~~v~v~gp~~~~~~v~-d~~dGty~v~Y~p~~~G~y~I~V~~~g 78 (94)
T 2w0p_A 33 AGGLAIAVEGPSKAEISFE-DRKDGSCGVAYVVQEPGDYEVSVKFNE 78 (94)
T ss_dssp SCCEEEEEEESSCCEEEEE-ECTTSCEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeEEEE-ECCCCEEEEEEEECCCceEEEEEEECC
Confidence 3467888899988554322 23455 44577888999999887654
No 27
>2bp3_A Filamin A; structural protein, cytoskeleton/complex, actin binding protein, cytoskeleton, complex; 2.32A {Homo sapiens} SCOP: b.1.18.10 PDB: 2aav_A
Probab=82.36 E-value=8 Score=25.13 Aligned_cols=44 Identities=11% Similarity=0.177 Sum_probs=30.7
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|++..+.-. +..+| ..+|+++++|.|.+...-..
T Consensus 36 ~~~l~v~v~~p~~~~~~v~-d~~dGty~v~Y~p~~~G~y~i~V~~~g 81 (97)
T 2bp3_A 36 EGGLSLAIEGPSKAEISCT-DNQDGTCSVSYLPVLPGDYSILVKYNE 81 (97)
T ss_dssp SEEEEEEEEESSCCEEEEE-ECSSSEEEEEEECSSCEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEEEE-ECCCCEEEEEEEeCCCCcEEEEEEECC
Confidence 4578899999988554322 23455 45577788999999887554
No 28
>2ds4_A Tripartite motif protein 45; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=82.22 E-value=8.8 Score=25.49 Aligned_cols=47 Identities=15% Similarity=0.258 Sum_probs=30.7
Q ss_pred CceEEEEEEcCCC--CeE-EeeeccceeeEE--EEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYG--NSY-HYADRVDSGQFA--FTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g--~~i-~~~~~~~~g~~~--f~~~~~G~y~~Cf~n~~~~ 108 (211)
+..+.+.|.+|++ ..+ .+-.+..+|.|. |++.+.|.|+++..-...+
T Consensus 48 g~~~~v~i~~p~~~~~~~~~~v~D~~dGty~v~y~p~~~G~y~i~V~~~g~~ 99 (113)
T 2ds4_A 48 GDNVQVAVVPKDKKDSPVRTMVQDNKDGTYYISYTPKEPGVYTVWVCIKEQH 99 (113)
T ss_dssp CCCEEEEEEESSCSSCCCEEEEECCSSSEEEEEEECSSSEEEEEEEEESSCB
T ss_pred CceEEEEEEecCCCCceeEEEEEECCCCEEEEEEEeCCCeEEEEEEEECCEE
Confidence 3578999999986 222 222333456444 7778899999988866543
No 29
>2eec_A Filamin-B; beta-sandwich, immunoglobulin-like fold, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=80.09 E-value=12 Score=25.73 Aligned_cols=54 Identities=13% Similarity=0.275 Sum_probs=35.4
Q ss_pred EEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecccee-eEEEEeeecccEEEEEEecC
Q 028261 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSG-QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~~~g-~~~f~~~~~G~y~~Cf~n~~ 106 (211)
.|.+...+++ ...+.+.|.+|++..+--.. ..+| ..+|++++.|.|.+...-..
T Consensus 41 ~F~v~t~daG-----~~~l~v~i~gp~~~~~~~~d-~~dGy~V~Y~P~~~G~y~I~V~~~g 95 (125)
T 2eec_A 41 EFFINTTRAG-----PGTLSVTIEGPSKVKMDCQE-TPEGYKVMYTPMAPGNYLISVKYGG 95 (125)
T ss_dssp EEEEECTTTC-----SCCEEEEEESSSCCCCEEEE-CSSSEEEEECCSSCEEEEEEEEESS
T ss_pred EEEEEEcCCC-----CCcEEEEEECCCCCcceeEE-CCCCEEEEEEcCCCeEEEEEEEECC
Confidence 4555544432 46889999999986543322 3355 34477789999999887665
No 30
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=79.55 E-value=14 Score=27.27 Aligned_cols=44 Identities=11% Similarity=0.172 Sum_probs=31.7
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|++..+.- .+..+| ..+|++...|.|.++..-..
T Consensus 127 ~g~l~v~I~gp~~~~~~~-~d~~dGty~v~Y~p~~~G~y~i~V~~~g 172 (188)
T 2k7p_A 127 EGGLSLAIEGPSKAEISC-TDNQDGTCSVSYLPVLPGDYSILVKYNE 172 (188)
T ss_dssp SSCEEEEEECSSCCEEEE-EECTTSEEEEEEECCSSEEEEEEEEETT
T ss_pred CCCeEEEEeCCCCCeEEE-EECCCCEEEEEEEeCCCEEEEEEEEECC
Confidence 457888999998855432 223456 56688889999999988654
No 31
>3d33_A Domain of unknown function with AN immunoglobulin beta-sandwich fold; structural genomics, joint center for structural genomics; HET: MSE; 1.70A {Bacteroides vulgatus atcc 8482}
Probab=77.52 E-value=11 Score=25.34 Aligned_cols=56 Identities=20% Similarity=0.207 Sum_probs=40.1
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEE-cCCCCeEEeeeccce--eeEEEEee--ecccEEEEEEecC
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVT-SAYGNSYHYADRVDS--GQFAFTAA--EAGDYMACFWAVD 106 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~-~p~g~~i~~~~~~~~--g~~~f~~~--~~G~y~~Cf~n~~ 106 (211)
|+.+.++|. .+ ..++.+.|+ +..|+++|+..-... ..+.+... .+|+|.+=+.+..
T Consensus 37 ~~~L~I~F~--~~--------~~~vtItI~~~~tG~iVY~~~v~~~~~~~~~I~L~~~~~G~Y~L~i~~~~ 97 (108)
T 3d33_A 37 GYLLTLKNA--SP--------DRDMTIRITDMAKGGVVYENDIPEVQSAYITISIANFPAEEYKLEITGTP 97 (108)
T ss_dssp TTEEEEEES--SC--------CSEEEEEEEETTTCCEEEEEEECGGGTTEEEEECTTSCSEEEEEEEEEES
T ss_pred CCEEEEEEC--Cc--------CCCEEEEEEECCCCcEEEEEeecCCCCcEEEEEcCCccCceEEEEEEeCC
Confidence 566777763 22 358999999 788999998754333 35555554 6899999999883
No 32
>4fxk_A Complement C4 beta chain; immune system, proteolytic cascade; HET: NAG BMA; 3.60A {Homo sapiens} PDB: 4fxg_A*
Probab=76.93 E-value=20 Score=31.46 Aligned_cols=64 Identities=16% Similarity=0.114 Sum_probs=42.0
Q ss_pred CCcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc-ceeeEEEEe--e---ecccEEEEEEecC
Q 028261 40 SNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV-DSGQFAFTA--A---EAGDYMACFWAVD 106 (211)
Q Consensus 40 ~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~-~~g~~~f~~--~---~~G~y~~Cf~n~~ 106 (211)
.|+.+++..-+.+.+. .|.+..+.+.+.||+|+.+.++.-. ..|-+.+.. + ..|.|++-.....
T Consensus 133 PGqtV~~r~i~~d~~~---~p~~~~~~v~i~dp~g~~v~~~~~~~~~G~~~~~f~Lp~~~~~G~w~i~v~~~~ 202 (656)
T 4fxk_A 133 PGQRVRYRVFALDQKM---RPSTDTITVMVENSHGLRVRKKEVYMPSSIFQDDFVIPDISEPGTWKISARFSD 202 (656)
T ss_dssp TTCEEEEEEEEECSSS---SBCCCCEEEEEECTTCCEEEEEEECCTTSEEEEEEECCTTCCSEEEEEEEEESS
T ss_pred CCCEEEEEEEEECCcc---CcCcccceEEEECCCCcEEeeeEEecCCceEEEEecCCCCCCCcCEEEEEEEcC
Confidence 3677766655555432 3445689999999999998776322 245554433 2 4699999987654
No 33
>2d7o_A Filamin-C; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=76.40 E-value=5.8 Score=26.70 Aligned_cols=54 Identities=17% Similarity=0.257 Sum_probs=33.6
Q ss_pred CceEEEEEEcCCCCeEEeeeccceee--EEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSGQ--FAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
...+.+.|.+|++..+. -.+..+|. ..|+++++|.|.+...-...+ ......+.
T Consensus 41 ~~~l~v~v~gp~~~~~~-v~d~~dGty~V~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (111)
T 2d7o_A 41 EGGLSLAVEGPSKAEIT-CKDNKDGTCTVSYLPTAPGDYSIIVRFDDKHIPGSPFTAK 97 (111)
T ss_dssp SSCBCCEEESSSCCCBC-CCCCSSSEEEEEECCSSCEEEEEECBBSSCBCTTCSEEEE
T ss_pred CCcEEEEEECCCCceEE-EEECCCCEEEEEEEeCCCeEEEEEEEECCEECCCcCEEEE
Confidence 34677888999864432 22334564 457788999999998765443 23334443
No 34
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=74.51 E-value=13 Score=27.47 Aligned_cols=45 Identities=13% Similarity=0.324 Sum_probs=31.4
Q ss_pred CceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecCC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDH 107 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 107 (211)
...+.+.|.+|++..+.- .+..+| ..+|+++.+|.|.++..-...
T Consensus 127 ~g~l~v~V~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~i~V~~~g~ 173 (191)
T 2k7q_A 127 YGGLSLSIEGPSKVDINT-EDLEDGTCRVTYCPTEPGNYIINIKFADQ 173 (191)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSCEEEEEEESSCEEEEEEEEETTE
T ss_pred CCceEEEEECCCCceEEE-EECCCCEEEEEEEeCCCceEEEEEEECCE
Confidence 357888899998754422 223455 566888899999999886543
No 35
>2k8e_A UPF0339 protein YEGP; protein structure initiative (PSI), northeast structur genomics consortium (NESG), ontario centre for structural P (OCSP); NMR {Escherichia coli} SCOP: d.348.1.1 d.348.1.1
Probab=74.00 E-value=10 Score=26.51 Aligned_cols=64 Identities=9% Similarity=0.270 Sum_probs=44.8
Q ss_pred EcCCCcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc------------------ceeeEEEEeeecccE
Q 028261 37 DIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV------------------DSGQFAFTAAEAGDY 98 (211)
Q Consensus 37 ~v~~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~------------------~~g~~~f~~~~~G~y 98 (211)
...+|-.+.+.|++.... +....+.+.+++|++|.+++.- ....|.......|+|
T Consensus 10 ~~~~~~~Mag~FEi~~~~-------~G~~rfrLka~NGeiI~sSe~Y~sk~~a~~gI~sVk~na~~a~~fE~~~~~~G~~ 82 (130)
T 2k8e_A 10 NFNQGVIMAGWFELSKSS-------DNQFRFVLKAGNGETILTSELYTSKTSAEKGIASVRSNSPQEERYEKKTASNGKF 82 (130)
T ss_dssp ----CCCCCCEEEEEECT-------TCCEEEEEECTTSCEEEECCCBSSHHHHHHHHHHHHHSSSCTTTEEEEEETTTEE
T ss_pred ccCccceeeeeEEEEEcC-------CCCEEEEEEeCCCCEEEEcCCcCCHHHHHHHHHHHHhhccccchheeeeccCCCE
Confidence 344566667889987654 3478899999999998764321 245788878889999
Q ss_pred EEEEEecCC
Q 028261 99 MACFWAVDH 107 (211)
Q Consensus 99 ~~Cf~n~~~ 107 (211)
.+-+.....
T Consensus 83 ~f~Lka~Ng 91 (130)
T 2k8e_A 83 YFNLKAANH 91 (130)
T ss_dssp EEEEECTTS
T ss_pred EEEEEeCCC
Confidence 999887654
No 36
>2k7p_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=72.50 E-value=9.6 Score=28.16 Aligned_cols=45 Identities=16% Similarity=0.096 Sum_probs=32.1
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceee--EEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQ--FAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|+|+...- -.+..+|. ..|++++.|.|++......
T Consensus 33 ~~~v~~~v~~PsG~~~~~~v~d~~dgty~v~y~P~~~G~h~i~V~~~g 80 (188)
T 2k7p_A 33 KGEITGEVRMPSGKVAQPTITDNKDGTVTVRYAPSEAGLHEMDIRYDN 80 (188)
T ss_dssp SSCEEEEEECTTSCEECCEEEECSSSEEEEEECCCCCEEEEEEEEETT
T ss_pred CceEEEEEECCCCCccccEEEeCCCCEEEEEEEccccEeEEEEEEECC
Confidence 347899999999986531 22234564 4578889999999988764
No 37
>2hr0_A Complement C3 beta chain; complement component C3B, immune system; HET: THC; 2.26A {Homo sapiens} PDB: 2i07_A* 2wii_A* 2win_A* 2xwj_A* 3l3o_A* 3l5n_A* 3nms_A* 3nsa_A* 3ohx_A* 3t4a_A 2a74_A* 2a73_A* 2qki_A* 3g6j_A 2ice_A* 2icf_A* 2xwb_A*
Probab=72.10 E-value=49 Score=29.15 Aligned_cols=62 Identities=15% Similarity=0.175 Sum_probs=39.1
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc---ceeeEE--EEee---ecccEEEEEEec
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV---DSGQFA--FTAA---EAGDYMACFWAV 105 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~---~~g~~~--f~~~---~~G~y~~Cf~n~ 105 (211)
|+.+++..-+.+.+. .|.+..+.+.|.||+|+.+.+..-. ..|.++ |..+ ..|.|++-....
T Consensus 120 GqtV~~r~i~~d~~~---~p~~~~v~v~l~dP~g~~i~~~~~~~~~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 189 (645)
T 2hr0_A 120 GSTVLYRIFTVNHKL---LPVGRTVMVNIENPEGIPVKQDSLSSQNQLGVLPLSWDIPELVNMGQWKIRAYYE 189 (645)
T ss_dssp TSEEEEEEEEECTTS---CBCCCEEEEEEECTTSCEEEEEEEECTTTTTEEEEEEECCSSCCCSEEEEEEEET
T ss_pred CCEEEEEEEEECCCC---cccCceEEEEEECCCCCEEEEEEeeccccCCeEEEEEECCCccccccEEEEEEEC
Confidence 456655544554432 3334579999999999998764221 345444 4433 469999998864
No 38
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=71.10 E-value=22 Score=24.37 Aligned_cols=43 Identities=7% Similarity=0.016 Sum_probs=28.3
Q ss_pred CCcEEEEEEEEecCCCCC---CCCCCceEEEEEEcCCCCeEEeeec
Q 028261 40 SNSMTVGKYNVVNPNDGH---PLPESHKLTVRVTSAYGNSYHYADR 82 (211)
Q Consensus 40 ~~~~i~~~y~v~~~~~~~---~~~~~~~i~~~v~~p~g~~i~~~~~ 82 (211)
.|..+.+.+.+.+..... .-++++..++.|+|++|+.++.+++
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~ 61 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSK 61 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTT
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccc
Confidence 455677777776544211 0123578899999999999996543
No 39
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=70.68 E-value=30 Score=25.74 Aligned_cols=45 Identities=16% Similarity=0.150 Sum_probs=32.5
Q ss_pred CceEEEEEEcCCCCeEE-eeecccee--eEEEEeeecccEEEEEEecCC
Q 028261 62 SHKLTVRVTSAYGNSYH-YADRVDSG--QFAFTAAEAGDYMACFWAVDH 107 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~-~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~ 107 (211)
...+.+.|.+|+| .+. .-.+..+| ..+|++.+.|.|.++..-...
T Consensus 134 ~~~l~v~i~~p~g-~~~~~v~d~~dGty~v~y~p~~~G~y~v~V~~~g~ 181 (212)
T 1qfh_A 134 GDKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGK 181 (212)
T ss_dssp CCCEEEEEEECCS-EEEEEEEECSSSEEEEEEEEESSEEEEEEEEETTE
T ss_pred CCcEEEEEECCCC-ceeeEEEECCCCEEEEEEEcCCCEEEEEEEEECCE
Confidence 4579999999999 432 22234466 556888899999999887653
No 40
>3sd2_A Putative member of DUF3244 protein family; immunoglobulin-like beta-sandwich, structural genomics, JOIN for structural genomics; HET: MSE; 1.40A {Bacteroides thetaiotaomicron}
Probab=69.86 E-value=18 Score=24.03 Aligned_cols=70 Identities=19% Similarity=0.230 Sum_probs=45.7
Q ss_pred EEEEeCCCcceEEEEcCCCcEEEEEEEEecCCCCCCCCCCceEEEEEEcC-CCCeEEeeeccceeeEEEEe--eecccEE
Q 028261 23 RFEIQSAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSA-YGNSYHYADRVDSGQFAFTA--AEAGDYM 99 (211)
Q Consensus 23 ~f~l~~g~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p-~g~~i~~~~~~~~g~~~f~~--~~~G~y~ 99 (211)
.+-+.|-.+.|.+.+ | .+.+.|.-. -..+.+.|.+. .|+.+|+..-..-....+.. ..+|+|.
T Consensus 19 sI~i~P~~~~~A~I~---n-vlsV~F~~~----------~~~vTItItNe~TG~~VYs~~~s~p~~i~IdLnge~sG~Y~ 84 (101)
T 3sd2_A 19 GIPIQPTYEKCAILS---N-ILNVSFGRA----------KDYAIITVTNKATGEIVHSKTYHNTSIVMIDMSSCEKGEYT 84 (101)
T ss_dssp CCCCCCSSEEEEEET---T-EEEEEESSC----------CSCEEEEEEETTTCCEEEEEEESSCSEEEEECTTSCSEEEE
T ss_pred eeeecccccccEEEe---C-EEEEEeccC----------CCcEEEEEEECCCCcEEEEEeccCCcEEEEEcCCCcCceEE
Confidence 344556666776643 3 676666522 35889999986 79999987544433444444 4688998
Q ss_pred EEEEecC
Q 028261 100 ACFWAVD 106 (211)
Q Consensus 100 ~Cf~n~~ 106 (211)
+=+....
T Consensus 85 IeI~~~~ 91 (101)
T 3sd2_A 85 IHIILND 91 (101)
T ss_dssp EEEEETT
T ss_pred EEEEeCC
Confidence 8877654
No 41
>2di8_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=69.53 E-value=22 Score=23.72 Aligned_cols=53 Identities=13% Similarity=0.287 Sum_probs=34.3
Q ss_pred ceEEEEEEcCCCCeEEeeecccee--eEEEEeeecccEEEEEEecCCC-CceeEEEE
Q 028261 63 HKLTVRVTSAYGNSYHYADRVDSG--QFAFTAAEAGDYMACFWAVDHS-PQTTVTID 116 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~~~~~~~~g--~~~f~~~~~G~y~~Cf~n~~~~-~~~~v~v~ 116 (211)
..+.+.|.+|++-.+.- .+..+| ..+|+++++|.|.+...-...+ ......+.
T Consensus 42 g~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~I~gSPF~v~ 97 (111)
T 2di8_A 42 GGISLAVEGPSKVDIQT-EDLEDGTCKVSYFPTVPGVYIVSTKFADEHVPGSPFTVK 97 (111)
T ss_dssp CCEEEEEESSSCCCEEC-CBCTTSCEEEEECCCSCSEEEEEEEESSCBCTTCSEEEE
T ss_pred CceEEEEEcCCCceEEE-EECCCCEEEEEEEeCCCeEEEEEEEECCEECCCCCEEEE
Confidence 46788889998754432 233456 4557788999999988866543 33344443
No 42
>2di9_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=68.87 E-value=25 Score=24.16 Aligned_cols=46 Identities=11% Similarity=0.229 Sum_probs=31.5
Q ss_pred CceEEEEEEcCCCCeEEeeeccceee--EEEEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSGQ--FAFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~ 108 (211)
...+.+.|.+|.+..+.- .+..+|. .+|++++.|.|.+...-....
T Consensus 61 ~~~l~v~v~gp~~~~~~v-~d~~dGty~v~Y~p~~~G~y~I~V~~~g~~ 108 (131)
T 2di9_A 61 TGGLGLTVEGPCEAKIEC-SDNGDGTCSVSYLPTKPGEYFVNILFEEVH 108 (131)
T ss_dssp SSCEEEEECSSSCCEEEE-EECSSSEEEEEEECSSSSEEEEEEEESSCB
T ss_pred CCeeEEEEEecCCceEEE-EECCCCEEEEEEEeCCCeeEEEEEEECCEE
Confidence 457888889998854422 2234564 457888999999998865543
No 43
>3hd7_B Syntaxin-1A; membrane protein, coiled-coil, 4-helical bundle, cell juncti cytoplasmic vesicle, membrane, phosphoprotein; HET: GGG; 3.40A {Rattus norvegicus} PDB: 3hd9_B 3ipd_B
Probab=67.61 E-value=25 Score=23.54 Aligned_cols=19 Identities=16% Similarity=0.277 Sum_probs=9.5
Q ss_pred CCChHHHHHHHHHHHHHHH
Q 028261 136 SVDVMELELKKLYDTVSSI 154 (211)
Q Consensus 136 ~~~~l~~~l~~l~~~l~~i 154 (211)
.+..++..+..|.+...++
T Consensus 22 eI~~Ie~~I~eL~~iF~dl 40 (109)
T 3hd7_B 22 EIIKLENSIRELHDMFMDM 40 (109)
T ss_dssp HHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHH
Confidence 3455555555555444443
No 44
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=67.37 E-value=16 Score=28.98 Aligned_cols=45 Identities=16% Similarity=0.145 Sum_probs=32.5
Q ss_pred ceEEEEEEcCCCCeEE-eeeccceee--EEEEeeecccEEEEEEecCCC
Q 028261 63 HKLTVRVTSAYGNSYH-YADRVDSGQ--FAFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~-~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~~~ 108 (211)
..+.+.|.+|+| .+. .-.+..+|. .+|+..+.|.|.++..-....
T Consensus 234 ~~l~v~i~~p~g-~~~~~v~d~~~G~y~v~y~p~~~G~y~i~V~~~g~~ 281 (311)
T 1wlh_A 234 DKFEVSITGPAE-EITLDAIDNQDGTYTAAYSLVGNGRFSTGVKLNGKH 281 (311)
T ss_dssp SCEEEEEESCCS-EEEEEEEECSSSEEEEEEEEECSEEEEEEEEETTEE
T ss_pred CcEEEEEECCCC-CceeEEEECCCCEEEEEEECCCCEeEEEEEEECCEE
Confidence 468899999999 443 222344665 568888999999999876543
No 45
>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X
Probab=64.25 E-value=9.6 Score=32.26 Aligned_cols=43 Identities=19% Similarity=0.302 Sum_probs=36.0
Q ss_pred ceEEEEEEcCCCCeEEeeeccceeeEEEEeeecccEEEEEEec
Q 028261 63 HKLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAV 105 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~~~~~~~~g~~~f~~~~~G~y~~Cf~n~ 105 (211)
.++.+.+++|+|.++....=...|.|.|.--.+|.|.+-|..+
T Consensus 330 ~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P 372 (429)
T 3irp_X 330 AGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMP 372 (429)
T ss_dssp TTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCC
T ss_pred CCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECC
Confidence 3688889999999887655456999999998999999998765
No 46
>3gf8_A Putative polysaccharide binding proteins (DUF1812; NP_809975.1, joint center for structural genomics; HET: MSE; 2.20A {Bacteroides thetaiotaomicron vpi-5482}
Probab=63.43 E-value=4.6 Score=32.37 Aligned_cols=72 Identities=17% Similarity=0.200 Sum_probs=34.8
Q ss_pred EEEEcCC-CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc----ceeeEEEEee-ecccEEEEEEec
Q 028261 34 IAEDIKS-NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV----DSGQFAFTAA-EAGDYMACFWAV 105 (211)
Q Consensus 34 f~~~v~~-~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~----~~g~~~f~~~-~~G~y~~Cf~n~ 105 (211)
++|+.+. ...+.+.|.-.-.....+...-..|++.|.|.+|+.+.+.... ..+.+....+ .+|.|++=-+..
T Consensus 7 I~edl~dC~~~l~F~Ydyn~~~~d~f~~~V~~V~lyvFD~~G~~v~~~~~~~~~L~~~~y~m~l~Lp~G~Y~~VaWgg 84 (296)
T 3gf8_A 7 FNEDLPECRLSVKFKYDYNMEFADAFHAQVDKVELYVFDKNGKYLFKQAEEGSALSTGNYLMEVELPVGQYQFMAWAG 84 (296)
T ss_dssp ------CCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEESGGGGSSCCCEEECCCSEEEEEEEEES
T ss_pred CCcCccCCCCEEEEEEecCCCcccccccccCEEEEEEEcCCCCEEEEEecchhhcccCceEEEEecCCCcEEEEEEEC
Confidence 6666655 3455555443211110111112489999999999988765322 1343333332 368887755544
No 47
>2dib_A Filamin-B; beta-sandwich, immunoglobulin-like fold, filamin domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: b.1.18.10
Probab=61.62 E-value=15 Score=25.10 Aligned_cols=47 Identities=15% Similarity=0.190 Sum_probs=31.8
Q ss_pred CceEEEEEEcCCCCeEEe-eeccceeeE--EEEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSGQF--AFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g~~--~f~~~~~G~y~~Cf~n~~~~ 108 (211)
...+.+.|.+|+|..+.- -.+..+|.| +|++.+.|.|++...-....
T Consensus 56 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~Y~p~~~G~~~i~V~~~g~~ 105 (128)
T 2dib_A 56 GDHIKAHIANPSGASTECFVTDNADGTYQVEYTPFEKGLHVVEVTYDDVP 105 (128)
T ss_dssp CSCCCEECCCSSSCCCCCEEEECSSSEEEEEECCSSCSEEEEEEBSSSCB
T ss_pred CccEEEEEECCCCCEeeeEEEECCCCEEEEEEEeCCCEeEEEEEEECCEE
Confidence 457888999999864422 122335544 47778999999998866543
No 48
>3hrz_A Cobra venom factor; serine protease, glycosilated, multi-domain, complement SYST convertase, complement alternate pathway; HET: NAG P6G; 2.20A {Naja kaouthia} PDB: 3frp_A* 3hs0_A*
Probab=60.54 E-value=36 Score=30.12 Aligned_cols=63 Identities=8% Similarity=-0.038 Sum_probs=33.8
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeeccceeeEEEEee---ecccEEEEEEecC
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVDSGQFAFTAA---EAGDYMACFWAVD 106 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~~~g~~~f~~~---~~G~y~~Cf~n~~ 106 (211)
|+.+++..-+.+.+. .|.+..+.+.+.||+|+.+..+.-...-.+.|..+ ..|.|++......
T Consensus 118 GqtV~~r~i~~d~~~---~p~~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~Lp~~~~~G~w~i~v~~~~ 183 (627)
T 3hrz_A 118 GSPVLYRVFSMDHNT---SKMNKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYEH 183 (627)
T ss_dssp TCEECEEEEESCC----------CEEEEEECTTCCEEEEEEEBTTBCCCEECCSSCCCEEEEEEEEETT
T ss_pred CCEEEEEEEEECCCC---cccCccEEEEEECCCCCEEEEEEeccceEEEEECCCCCCCeeEEEEEEECC
Confidence 455544443433321 23356789999999999987543221122233333 4688888887543
No 49
>1gl2_D Syntaxin 8, vesicle transport V-snare protein VTI1-like 1; membrane protein, membrane fusion protein complex, coiled coil, transmembrane; 1.9A {Rattus norvegicus} SCOP: h.1.15.1
Probab=57.13 E-value=24 Score=21.01 Aligned_cols=45 Identities=13% Similarity=0.172 Sum_probs=34.4
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 136 SVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMA 180 (211)
Q Consensus 136 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 180 (211)
+++.+...+.++......|.+|.+..-..-++.-...+++..++-
T Consensus 10 ~Ld~L~~~v~~lk~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~l~ 54 (65)
T 1gl2_D 10 GLDALSSIISRQKQMGQEIGNELDEQNEIIDDLANLVENTDEKLR 54 (65)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 467788888889888999998888877776666666666666653
No 50
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=54.98 E-value=74 Score=24.88 Aligned_cols=44 Identities=18% Similarity=0.317 Sum_probs=30.1
Q ss_pred CceEEEEEEcCCCCeEEeeeccceeeE--EEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSGQF--AFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g~~--~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|.+..+.- .+..+|.| +|+++++|.|.++..-..
T Consensus 227 ~g~l~v~v~gp~~~~~~~-~d~~dGt~~v~y~p~~~G~y~i~V~~~~ 272 (288)
T 2j3s_A 227 AGGLAIAVEGPSKAEISF-EDRKDGSCGVAYVVQEPGDYEVSVKFNE 272 (288)
T ss_dssp SEEEEEEEEESSCEEEEE-EECTTSEEEEEEEESSCEEEEEEEEETT
T ss_pred CCceEEEEeCCCCcceeE-EECCCCEEEEEEEcCCCeeEEEEEEECC
Confidence 457889999997644322 23345544 678888999999887654
No 51
>2nps_D Syntaxin-6; vesicle fusion, snare complex, early endosomal snare complex, VTI1A, VAMP4, transport protein; 2.50A {Homo sapiens}
Probab=54.87 E-value=37 Score=21.34 Aligned_cols=46 Identities=15% Similarity=0.099 Sum_probs=35.4
Q ss_pred CCCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 135 GSVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMA 180 (211)
Q Consensus 135 e~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 180 (211)
++++.+...+.++......|.+|.+..-.--+..-..++.+..|+-
T Consensus 19 ~~Ld~L~~~v~~LK~~a~~Ig~El~~Qn~lLd~l~~~~d~~~~~L~ 64 (82)
T 2nps_D 19 EQLELVSGSIGVLKNMSQRIGGELEEQAVMLEDFSHELESTQSRLD 64 (82)
T ss_dssp CTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHhHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 4578899999999999999999988777666666666666665553
No 52
>2k7q_A Filamin-A; IG-like, ABP-280, actin binding protein, acetylation, actin-binding, cytoplasm, cytoskeleton, disease mutation, phosphoprotein; NMR {Homo sapiens}
Probab=54.75 E-value=22 Score=26.07 Aligned_cols=45 Identities=20% Similarity=0.261 Sum_probs=32.1
Q ss_pred CceEEEEEEcCCCCeEEee-ecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYA-DRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~-~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
..++.+.|.+|+|+.+--. ....+| ...|++++.|.|.+-.....
T Consensus 30 ~~~l~v~v~~PsG~~~~~~v~~~~~g~y~v~ftP~~~G~~~i~V~~~g 77 (191)
T 2k7q_A 30 LSLLTATVVPPSGREEPCLLKRLRNGHVGISFVPKETGEHLVHVKKNG 77 (191)
T ss_dssp SSSEEEEEECTTSCCEECEEEECTTSCEEEECCCSSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCEEeeEEEECCCCEEEEEEEccCCEeEEEEEEECC
Confidence 4589999999999765321 223344 45688889999998877754
No 53
>1wlh_A Gelation factor; ABP-120, filamin, immunoglobulin fold, ROD domain, structural protein; 2.80A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10 b.1.18.10 PDB: 1ksr_A
Probab=53.92 E-value=55 Score=25.83 Aligned_cols=45 Identities=13% Similarity=0.182 Sum_probs=31.0
Q ss_pred CceEEEEEEcCCCCeEEe-eecccee--eEEEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHY-ADRVDSG--QFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~-~~~~~~g--~~~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|+|..+.. -.+..+| ..+|++.+.|.|+++..-..
T Consensus 142 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~y~i~V~~~g 189 (311)
T 1wlh_A 142 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 189 (311)
T ss_dssp CCCEEEEEECTTSCBCCCEEEEETTTEEEEEECCCSSEEEEEEEEETT
T ss_pred CCcEEEEEECCCCCeeeEEEEECCCCEEEEEEECCCCEEEEEEEEECC
Confidence 457899999999864321 1222345 44577789999999988654
No 54
>2lif_A Core protein P21; signal peptide, E1 envelope protein, transmemb membrane protein, viral protein; NMR {Hepatitis c virus jfh-1}
Probab=58.44 E-value=2.8 Score=20.79 Aligned_cols=20 Identities=5% Similarity=0.278 Sum_probs=14.4
Q ss_pred HHHHHHHHHHHHhhcceeEE
Q 028261 4 LTLTLVLVIGILSSTSQSLR 23 (211)
Q Consensus 4 ~~~~~~~~l~~l~~~~~~l~ 23 (211)
.+++++.++.+|..++.++.
T Consensus 6 fsiFlLaLlscLt~Pasa~~ 25 (27)
T 2lif_A 6 FSIFLLALLSCITVPVSAAQ 25 (27)
Confidence 45677777777778877754
No 55
>1qle_D Cytochrome AA3, ccytochrome C oxidase; oxidoreductase/immune system, complex (oxidoreductase/antibody), electron transport; HET: HEA PC1; 3.0A {Paracoccus denitrificans} SCOP: f.23.8.1
Probab=52.44 E-value=28 Score=19.22 Aligned_cols=28 Identities=18% Similarity=0.077 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 168 MQELNRVTNSRMAWFSGFSLFICIAVAG 195 (211)
Q Consensus 168 ~~~~~es~~~rv~~~sii~~~vli~~~~ 195 (211)
|.++-+.--.-..|.+++-+++++++++
T Consensus 13 hE~Ty~gFi~~~k~gt~~~~~~ll~mai 40 (43)
T 1qle_D 13 QQATFAGFIKGATWVSILSIAVLVFLAL 40 (43)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3444444445566667777777776665
No 56
>1qfh_A Protein (gelation factor); actin binding protein, immunoglobulin, ABP- 120; 2.20A {Dictyostelium discoideum} SCOP: b.1.18.10 b.1.18.10
Probab=51.59 E-value=71 Score=23.63 Aligned_cols=45 Identities=13% Similarity=0.223 Sum_probs=30.3
Q ss_pred CceEEEEEEcCCCCeEEee-eccceeeE--EEEeeecccEEEEEEecC
Q 028261 62 SHKLTVRVTSAYGNSYHYA-DRVDSGQF--AFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~-~~~~~g~~--~f~~~~~G~y~~Cf~n~~ 106 (211)
...+.+.|.+|+|..+.-. .+..+|.| .|++.+.|.|.+-..-..
T Consensus 43 ~~~~~v~i~~p~g~~~~~~v~d~~dGty~v~y~p~~~G~~~i~V~~~g 90 (212)
T 1qfh_A 43 GDPFEVAINGPDGLVVDAKVTDNNDGTYGVVYDAPVEGNYNVNVTLRG 90 (212)
T ss_dssp CCCEEEEEECGGGCEECCEEEECSSSEEEEEECCCSSEEEEEEEEETT
T ss_pred CCeEEEEEECCCCCEeeeEEEECCCcEEEEEEECcCcEEEEEEEEECC
Confidence 4578999999998644221 22335544 467788999998877654
No 57
>3jqw_A COLH protein, collagenase; beta-barrel, dual calcium site, cell adhesion; 2.00A {Clostridium histolyticum} SCOP: b.23.2.0 PDB: 3jqx_A
Probab=51.35 E-value=55 Score=22.30 Aligned_cols=71 Identities=15% Similarity=0.119 Sum_probs=48.7
Q ss_pred CCCcceEEEEcCCCcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeec-cceeeEEEEeeecccEEEEEEecC
Q 028261 28 SAHTKCIAEDIKSNSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADR-VDSGQFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 28 ~g~~~Cf~~~v~~~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~-~~~g~~~f~~~~~G~y~~Cf~n~~ 106 (211)
......|...+++...+.+.+.-.. +.+++..+++.+++.+..... ...-.-.|.+.++|.|-+.+..-.
T Consensus 35 ~dd~D~y~F~V~~~g~v~I~l~~~~---------~~~~~w~ly~~~~nyv~y~~~~gn~~~~~~~~~~pGkYYl~Vy~y~ 105 (121)
T 3jqw_A 35 TSDQDYFYFDVITPGEVKIDINKLG---------YGGATWVVYDENNNAVSYATDDGQNLSGKFKADKPGRYYIHLYMFN 105 (121)
T ss_dssp TTCCEEEEEEESSCEEEEEEEEECS---------SSEEEEEEECTTSCEEEECEECSSEEEEEEEECSCEEEEEEEEEEE
T ss_pred cCCeeEEEEEeCCCCeEEEEEEecC---------CCcEEEEEEeCCCCeEEEeccCCCEEEEEEEeCCCeeEEEEEEEec
Confidence 4458899999999888877755432 358888999888776644331 112233356668999999998765
Q ss_pred C
Q 028261 107 H 107 (211)
Q Consensus 107 ~ 107 (211)
.
T Consensus 106 ~ 106 (121)
T 3jqw_A 106 G 106 (121)
T ss_dssp C
T ss_pred C
Confidence 4
No 58
>3pay_A Putative adhesin; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-biology, cell adhesion; 2.50A {Bacteroides ovatus}
Probab=51.00 E-value=6.4 Score=31.83 Aligned_cols=71 Identities=13% Similarity=0.061 Sum_probs=36.8
Q ss_pred EEEEcCC-CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeeccc----eeeEEEEee---ecccEEEEEEec
Q 028261 34 IAEDIKS-NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRVD----SGQFAFTAA---EAGDYMACFWAV 105 (211)
Q Consensus 34 f~~~v~~-~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~~----~g~~~f~~~---~~G~y~~Cf~n~ 105 (211)
++|+.+. ...+.+.|.........+...-..|++.|.|.+|+.+.+..... .+. ....+ .+|.|++=-+..
T Consensus 6 I~eDl~dC~~~L~F~Ydyn~~~~d~f~~~V~~v~lyvFD~~G~~v~~~~~~~~~L~~~~-~m~l~~~l~~G~Y~~VaWgg 84 (314)
T 3pay_A 6 IREDLPRCELWLEFVFDYNMEYADAFNPQVKSVDVLVFDSDDKLLFTKSVKVAALVGGN-RMSLTDELDFGSYKVLTVGS 84 (314)
T ss_dssp SCSSSCCCCEEEEEECCCSTTCSCCHHHHCCEEEEEEECTTSBEEEEEEEEGGGSBTTT-EEECTTTCCSEEEEEEEEES
T ss_pred cccCccCCCCeEEEEEecCCCcccchhcccCEEEEEEEcCCCCEEEEEecchhhccCCc-eEecCCcCCCCcEEEEEEeC
Confidence 5555443 23566665332221111111134899999999999887653221 222 44433 367777654443
No 59
>3cu7_A Complement C5; Mg domain, inflammation, anaphylatoxin, cleavage of basic residues, complement alternate pathway, glycoprotein, immune response; HET: NAG; 3.10A {Homo sapiens} PDB: 3kls_A* 3km9_A* 4e0s_A* 3prx_A* 3pvm_A* 4a5w_A* 1xwe_A
Probab=50.68 E-value=55 Score=32.59 Aligned_cols=63 Identities=10% Similarity=0.135 Sum_probs=39.4
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc-ceeeEE---EEee---ecccEEEEEEecC
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV-DSGQFA---FTAA---EAGDYMACFWAVD 106 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~-~~g~~~---f~~~---~~G~y~~Cf~n~~ 106 (211)
|+.+++..-+.+.+ ..|.+..+.+.|.||+|+.+.++.-. ..|.++ |..+ ..|.|++=.....
T Consensus 138 GqtV~~r~i~~d~~---~~p~~~~v~v~l~dP~G~~i~~~~~~~~~G~~~~~~f~Lp~~~~~G~w~I~v~~~~ 207 (1676)
T 3cu7_A 138 DQSVKVRVYSLNDD---LKPAKRETVLTFIDPEGSEVDMVEEIDHIGIISFPDFKIPSNPRYGMWTIKAKYKE 207 (1676)
T ss_dssp TCEECEEEEEECTT---CSCCCCCEEEEEEETTTEECCCEEECCSSSEEECCCEECCSSCCCEEEEEEEEBSS
T ss_pred CCEEEEEEEEECCC---CcccccceEEEEECCCCCEEEEEeeecCCCceecceeeCCCCccccceEEEEEecC
Confidence 44554444444433 23334679999999999988776322 355555 3333 4799999988654
No 60
>2b39_A C3; thioester, immune defense, immune system; HET: NAG BMA; 3.00A {Bos taurus}
Probab=49.67 E-value=77 Score=31.54 Aligned_cols=62 Identities=11% Similarity=0.170 Sum_probs=37.5
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc---ceee--EEEEee---ecccEEEEEEec
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV---DSGQ--FAFTAA---EAGDYMACFWAV 105 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~---~~g~--~~f~~~---~~G~y~~Cf~n~ 105 (211)
|+.+++..-+.+.+ ..|.+..+.+.|.||+|+.+.+..-. ..|. +.|..+ ..|.|++=....
T Consensus 141 GqtV~~r~i~~d~~---~~p~~~~v~v~l~dP~g~~i~~~~~~~t~~~G~~~~~f~Lp~~~~~G~w~I~v~~~ 210 (1661)
T 2b39_A 141 GSTVLYRVFTVDHK---LLPVGQTVFITIETPDGIPVKRDSKSSQNQFGILTLSWNIPELVNMGVWKIKAYYE 210 (1661)
T ss_dssp TSEEEEEEEEECTT---SCCCCCCEEEEEEETTEEEEEEEEECTTTTTSCCEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEECCC---CcccCceEEEEEECCCCCEEeeeeecccccCCeEeeeeeCCCCccccceEEEEEee
Confidence 34444444444433 23334678999999999988764322 2453 344443 469999988753
No 61
>2pn5_A TEP1R, thioester-containing protein I; FULL-length mature peptide, immune system; HET: NAG; 2.70A {Anopheles gambiae}
Probab=49.20 E-value=70 Score=30.92 Aligned_cols=64 Identities=13% Similarity=0.073 Sum_probs=38.1
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeecc--ceeeEE--EEee---ecccEEEEEEec
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADRV--DSGQFA--FTAA---EAGDYMACFWAV 105 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~~--~~g~~~--f~~~---~~G~y~~Cf~n~ 105 (211)
|+.+.+.--+.+.+. .+......+.+.|.||+|+.+.++... ..|.++ |..+ ..|.|++-....
T Consensus 114 GqtV~~r~~~~~~~~-~p~~~~~~v~v~l~dp~g~~i~~~~~~~~~~G~~~~~f~Lp~~~~~G~y~I~~~~~ 184 (1325)
T 2pn5_A 114 GDTVNFRVIVLDTEL-KPPARVKSVYVTIRDPQRNVIRKWSTAKLYAGVFESDLQIAPTPMLGVWNISVEVE 184 (1325)
T ss_dssp TCEEEEEEEEEETTS-SCCSSCCEEEEEEECTTCCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEEET
T ss_pred CCEEEEEEEEecCCc-cccccCccEEEEEECCCCCEEEEEecccCCCCeEecceECCCCccccceEEEEEeC
Confidence 445544433444332 122222468999999999999887543 245443 3333 469999988764
No 62
>1m56_D Cytochrome C oxidase; membrane protein, oxidoreductase; HET: HEA PEH; 2.30A {Rhodobacter sphaeroides} SCOP: f.23.8.1 PDB: 1m57_D*
Probab=47.98 E-value=38 Score=19.44 Aligned_cols=29 Identities=10% Similarity=-0.049 Sum_probs=17.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 168 MQELNRVTNSRMAWFSGFSLFICIAVAGM 196 (211)
Q Consensus 168 ~~~~~es~~~rv~~~sii~~~vli~~~~~ 196 (211)
|.++-+.--+-..|.+++-++++++++++
T Consensus 21 he~Ty~gFi~~~k~gt~~~~~~ll~laif 49 (51)
T 1m56_D 21 QEKTFAGFVRMVTWAAVVIVAALIFLALA 49 (51)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 33444444455666677777777776654
No 63
>3c75_A Amicyanin; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=46.93 E-value=61 Score=22.15 Aligned_cols=16 Identities=38% Similarity=0.488 Sum_probs=9.8
Q ss_pred eeeEEEEeeecccEEE
Q 028261 85 SGQFAFTAAEAGDYMA 100 (211)
Q Consensus 85 ~g~~~f~~~~~G~y~~ 100 (211)
...++++..++|.|.+
T Consensus 102 G~t~~~tF~~~G~y~y 117 (132)
T 3c75_A 102 DQAYAITFNEAGSYDY 117 (132)
T ss_dssp TEEEEEEECSCEEEEE
T ss_pred CCEEEEEcCCCEEEEE
Confidence 3455555567888843
No 64
>2x5p_A FBA2, fibronectin binding protein; protein binding; 1.60A {Streptococcus pyogenes}
Probab=44.48 E-value=32 Score=23.53 Aligned_cols=39 Identities=18% Similarity=0.066 Sum_probs=30.3
Q ss_pred eEEEEEEcCCCCeEEeeeccceeeEEEEeeecccEEEEEEe
Q 028261 64 KLTVRVTSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWA 104 (211)
Q Consensus 64 ~i~~~v~~p~g~~i~~~~~~~~g~~~f~~~~~G~y~~Cf~n 104 (211)
+-.|.+++.+|+.+.++. ..|.+.+.--..|.|.+.=.-
T Consensus 44 GA~F~l~~~~g~~v~~~~--sdG~~~~~~L~~G~Y~l~Etk 82 (121)
T 2x5p_A 44 GATMELRDSSGKTISTWI--SDGQVKDFYLMPGKYTFVETA 82 (121)
T ss_dssp CCEEEEECTTSCEEEEEE--CCSSCEEEEECSEEEEEEEEE
T ss_pred CCEEEEEECCCCEEEEEE--eCCEEEEcccCCcEEEEEEEe
Confidence 567888999999886654 468888887789999887443
No 65
>3fn2_A Putative sensor histidine kinase domain; GUT microbiome, structural genomics protein structure initiative; HET: MSE; 1.90A {Clostridium symbiosum atcc 14940}
Probab=43.80 E-value=29 Score=23.05 Aligned_cols=39 Identities=23% Similarity=0.330 Sum_probs=28.4
Q ss_pred EEEEEcCCCCeEEeeeccceeeEEEEeeeccc---EEEEEEe
Q 028261 66 TVRVTSAYGNSYHYADRVDSGQFAFTAAEAGD---YMACFWA 104 (211)
Q Consensus 66 ~~~v~~p~g~~i~~~~~~~~g~~~f~~~~~G~---y~~Cf~n 104 (211)
.+.|+|.+|.+|......+.+...+-+.++|. +++||.-
T Consensus 51 ~lrI~D~~G~vi~~~~~~a~~~~~vLa~~g~n~lGW~Ley~l 92 (106)
T 3fn2_A 51 YVRITDKDGQVITYEDGSVQDKTVFLTNEGANKLGWKLEFLI 92 (106)
T ss_dssp EEEEECTTSCBCSCCCSCSTTEEEEEEECSCCTTCCEEEEEE
T ss_pred cEEEEcCCCCEEecCCCCcCcceeehhhcCCCccceEEEEEe
Confidence 68899999999985555556777888877764 3666653
No 66
>3prx_B Cobra venom factor; immune system, complement, immune SYS complex; HET: NAG; 4.30A {Naja kaouthia} PDB: 3pvm_B*
Probab=42.32 E-value=1.2e+02 Score=30.42 Aligned_cols=44 Identities=7% Similarity=-0.038 Sum_probs=29.8
Q ss_pred CceEEEEEEcCCCCeEEeeeccceeeEEEEee---ecccEEEEEEec
Q 028261 62 SHKLTVRVTSAYGNSYHYADRVDSGQFAFTAA---EAGDYMACFWAV 105 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~~~g~~~f~~~---~~G~y~~Cf~n~ 105 (211)
+..+.+.|.||+|+.+.++.-...-..+|..+ ..|.|++.....
T Consensus 158 ~~~~~v~i~dP~g~~i~~~~~~~~~~~~f~L~~~~~~G~w~I~v~~~ 204 (1642)
T 3prx_B 158 NKTVIVEFQTPEGILVSSNSVDLNFFWPYNLPDLVSLGTWRIVAKYE 204 (1642)
T ss_dssp CCCEEEEEECSSCCEEEEEEECTTCCCEEECCSSCCCEEEEEEEEET
T ss_pred CceEEEEEECCCCCEEEEEEecccceEEEEcCCCCCceeEEEEEEeC
Confidence 56789999999999998864322223344433 468888887743
No 67
>2xwx_A GBPA, glcnac-binding protein A; chitin-binding protein; 1.80A {Vibrio cholerae}
Probab=41.17 E-value=1.5e+02 Score=24.55 Aligned_cols=47 Identities=15% Similarity=0.097 Sum_probs=32.7
Q ss_pred CceEEEEEEcCCCCeEEeee-ccceee-EEEEee----ecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHYAD-RVDSGQ-FAFTAA----EAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~-~~~~g~-~~f~~~----~~G~y~~Cf~n~~~~ 108 (211)
+..+.++|+|..|+.+.... ....+. ..|+.. +.|.|.+-.......
T Consensus 324 ~~~v~~~v~d~~~~~~~~~~~~v~~~~~~~~tl~ls~~~aGhh~lvv~~~~~~ 376 (391)
T 2xwx_A 324 EMSAELTVYNHHQKPLASWSQAMTDGELKSITLELSEAKAGHHMLVSRIKDRD 376 (391)
T ss_dssp SEEEEEEEECTTSCEEEEEEEEECTTCEEEEEEECSCCCSEEEEEEEEEEETT
T ss_pred ceEEEEEEEcCCCCccceeeEEEcCCCcceEEEEccCCCCccEEEEEEEECCC
Confidence 45888899999999886543 333333 555554 789999998886544
No 68
>4acq_A Alpha-2-macroglobulin; hydrolase inhibitor, proteinase inhibitor, irreversible PROT inhibitor, conformational change, blood plasma inhibitor; HET: MEQ NAG MAN; 4.30A {Homo sapiens}
Probab=39.11 E-value=2.9e+02 Score=27.17 Aligned_cols=62 Identities=15% Similarity=0.126 Sum_probs=35.7
Q ss_pred CcEEEEEEEEecCCCCCCCCCCceE-EEEEEcCCCCeEEeeecc--ceeeE--EEEee---ecccEEEEEEec
Q 028261 41 NSMTVGKYNVVNPNDGHPLPESHKL-TVRVTSAYGNSYHYADRV--DSGQF--AFTAA---EAGDYMACFWAV 105 (211)
Q Consensus 41 ~~~i~~~y~v~~~~~~~~~~~~~~i-~~~v~~p~g~~i~~~~~~--~~g~~--~f~~~---~~G~y~~Cf~n~ 105 (211)
|+.+.+.--+.+.+. .|....+ .+.|.||+|+.+.++... ..|.+ +|..+ ..|.|++-....
T Consensus 118 gq~V~~rv~~~~~~~---~p~~~~~~~v~i~dp~g~~i~~~~~~~~~~G~~~~~f~L~~~~~~G~w~I~~~~~ 187 (1451)
T 4acq_A 118 GQTVKFRVVSMDENF---HPLNELIPLVYIQDPKGNRIAQWQSFQLEGGLKQFSFPLSSEPFQGSYKVVVQKK 187 (1451)
T ss_dssp TCEEEEEEEEECTTC---CBCCCEEEEEEEECTTSCEEEEEEEEECBTTEEEEEEECCSSCCCEEEEEEEECT
T ss_pred CCEEEEEEEEECCCC---cCccCceeEEEEECCCCCEEEEeeeccCCCCeEEEEeECCCCCCceeEEEEEEec
Confidence 444444433344331 2333444 689999999999886433 23433 33332 468998887754
No 69
>2q0z_X Protein Pro2281; SEC63, SEC, NESG, HR1979, structural genomics, translocase, northeast structural genomics consortium, PSI-2; 2.00A {Homo sapiens} SCOP: a.289.1.1 b.1.18.22
Probab=38.07 E-value=1.5e+02 Score=23.65 Aligned_cols=46 Identities=17% Similarity=0.147 Sum_probs=30.3
Q ss_pred CceEEEEEEcCCCCeEEeeec-----cceeeEEEEeeecccEEEEEEecCC
Q 028261 62 SHKLTVRVTSAYGNSYHYADR-----VDSGQFAFTAAEAGDYMACFWAVDH 107 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~-----~~~g~~~f~~~~~G~y~~Cf~n~~~ 107 (211)
...--+.|.|++++.++.-++ ....+..|+++.+|.|.+++.--+.
T Consensus 264 ~e~wwi~v~d~~~~~ll~~~r~~l~~~~~~~l~f~~P~~g~~~~~v~~vSD 314 (339)
T 2q0z_X 264 EEGWWVVIGDAKSNSLISIKRLTLQQKAKVKLDFVAPATGAHNYTLYFMSD 314 (339)
T ss_dssp CCCEEEEEEETTTTEEEEEEEECCSSEEEEEEEEECCSSEEEEEEEEEEES
T ss_pred CCcEEEEEEECCCCEEEEEEEEecccceEEEEEEECCCCCCeeEEEEEEcc
Confidence 356778889998776643222 1234678888888887777666443
No 70
>1jcd_A Major outer membrane lipoprotein; protein folding, coiled coil, helix capping, alanine-zipper, membrane protein; 1.30A {Escherichia coli} SCOP: h.1.16.1 PDB: 1eq7_A 1t8z_A* 2guv_A 2gus_A 1jcc_A 1kfn_A 1kfm_A
Probab=35.58 E-value=64 Score=18.54 Aligned_cols=27 Identities=7% Similarity=0.026 Sum_probs=18.1
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 137 VDVMELELKKLYDTVSSIHQEMFYLRE 163 (211)
Q Consensus 137 ~~~l~~~l~~l~~~l~~i~~~q~~~~~ 163 (211)
++.|...++.|...+..+..+...++.
T Consensus 6 i~~Lss~V~~L~~kVdqLssdV~al~~ 32 (52)
T 1jcd_A 6 ADQASSDAQTANAKADQASNDANAARS 32 (52)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 456667777777777777776665553
No 71
>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}
Probab=32.50 E-value=96 Score=19.63 Aligned_cols=55 Identities=15% Similarity=0.160 Sum_probs=30.5
Q ss_pred EEEEecCCCCCCCCCCceEEEEEEcCCCC-eEEeeeccceeeEEEEe---------eecccEEEEEE
Q 028261 47 KYNVVNPNDGHPLPESHKLTVRVTSAYGN-SYHYADRVDSGQFAFTA---------AEAGDYMACFW 103 (211)
Q Consensus 47 ~y~v~~~~~~~~~~~~~~i~~~v~~p~g~-~i~~~~~~~~g~~~f~~---------~~~G~y~~Cf~ 103 (211)
...|.+.++ .|.+ +..|.+.+++-..- .+....-..+|.++|++ +..|.|-+---
T Consensus 4 ~v~V~d~~G-kPV~-gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a~l 68 (82)
T 3e8v_A 4 SVLVTDAEG-QPVA-DATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSKL 68 (82)
T ss_dssp EEEEECTTS-CBCT-TCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEEEE
T ss_pred EEEEEcCCC-CCCC-CCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEEEe
Confidence 444555432 2333 45788888874221 12222223478899888 77887655533
No 72
>3ogl_Q JAZ1 incomplete degron peptide; leucine-rich repeats, ubiquitin ligase, SCF, protein binding; HET: 7JA; 3.18A {Arabidopsis thaliana} PDB: 3ogm_Q*
Probab=32.03 E-value=17 Score=16.76 Aligned_cols=10 Identities=50% Similarity=0.863 Sum_probs=7.1
Q ss_pred HHHHHhhhcc
Q 028261 200 HLKTFFEKKK 209 (211)
Q Consensus 200 ~lk~fF~~Kk 209 (211)
.|.+||+++|
T Consensus 9 SLqRFleKRk 18 (21)
T 3ogl_Q 9 SLHRFLEKRK 18 (26)
T ss_pred HHHHHHHHhh
Confidence 5677887765
No 73
>4hci_A Cupredoxin 1; structural genomics, niaid, national institute of allergy AN infectious diseases; 1.63A {Bacillus anthracis} PDB: 4hcg_A 4hcf_A
Probab=31.04 E-value=1e+02 Score=19.51 Aligned_cols=17 Identities=24% Similarity=0.534 Sum_probs=13.0
Q ss_pred eeeEEEEeeecccEE-EE
Q 028261 85 SGQFAFTAAEAGDYM-AC 101 (211)
Q Consensus 85 ~g~~~f~~~~~G~y~-~C 101 (211)
...+.|+..++|+|. .|
T Consensus 68 ~~~~~~t~~~~G~Y~y~C 85 (100)
T 4hci_A 68 EKNITVKPKSAGTYELIC 85 (100)
T ss_dssp EEEEEECCCSCEEEEEEC
T ss_pred ceeEEEecccCceEEEEC
Confidence 456788888999995 46
No 74
>3afg_A Subtilisin-like serine protease; propeptide, thermococcus kodakaraensis, hydrolas protease; 2.00A {Thermococcus kodakarensis}
Probab=30.07 E-value=2.7e+02 Score=23.98 Aligned_cols=47 Identities=15% Similarity=0.210 Sum_probs=34.4
Q ss_pred CceEEEEEEcCCCCeEEeeecc--ceeeEEEEeeecccEEEEEEecCCC
Q 028261 62 SHKLTVRVTSAYGNSYHYADRV--DSGQFAFTAAEAGDYMACFWAVDHS 108 (211)
Q Consensus 62 ~~~i~~~v~~p~g~~i~~~~~~--~~g~~~f~~~~~G~y~~Cf~n~~~~ 108 (211)
..++++.+++|+|..+...... ...+..+.....|+|.+-+......
T Consensus 458 ~~dldl~l~~p~G~~~~~~~~~~~~~E~v~~~~~~~G~y~i~V~~~~~s 506 (539)
T 3afg_A 458 GSDLDLYLYDPNGNQVDYSYTAYYGFEKVGYYNPTAGTWTIKVVSYSGS 506 (539)
T ss_dssp TCEEEEEEECTTSCEEEEECCSSBSCEEEEEESCCSEEEEEEEEEEESC
T ss_pred CCCeEEEEECCCCCEeeccccCCCceeEEEECCCCCEEEEEEEEeccCC
Confidence 3589999999999987554321 2335567777899999999876543
No 75
>2r5o_A Putative ATP binding component of ABC- transporter; immunoglobulin fold, carbohydrate binding, domain swapping, O antigen export; HET: PG4; 1.30A {Escherichia coli}
Probab=30.00 E-value=44 Score=24.40 Aligned_cols=18 Identities=6% Similarity=-0.188 Sum_probs=14.6
Q ss_pred ceEEEEEEcCCCCeEEee
Q 028261 63 HKLTVRVTSAYGNSYHYA 80 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~~~ 80 (211)
..+.+.|++.+|..++..
T Consensus 87 ~v~G~~Ik~~~G~~I~g~ 104 (188)
T 2r5o_A 87 VVPGILIKTLDGLFLYGT 104 (188)
T ss_dssp EEEEEEEEETTCCEEEEE
T ss_pred cEEEEEEECCCCCEEEec
Confidence 467889999999988753
No 76
>2akf_A Coronin-1A; coiled coil, protein binding; 1.20A {Synthetic}
Probab=28.83 E-value=60 Score=16.14 Aligned_cols=19 Identities=16% Similarity=0.373 Sum_probs=10.7
Q ss_pred ChHHHHHHHHHHHHHHHHH
Q 028261 138 DVMELELKKLYDTVSSIHQ 156 (211)
Q Consensus 138 ~~l~~~l~~l~~~l~~i~~ 156 (211)
..+++.+.+++..++.++.
T Consensus 2 srlee~~r~l~~ivq~lq~ 20 (32)
T 2akf_A 2 SRLEEDVRNLNAIVQKLQE 20 (32)
T ss_dssp CHHHHHHHHHHHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHH
Confidence 3456666666655555543
No 77
>1sfc_D Protein (SNAP-25B), protein (synaptobrevin 2); membrane fusion protein complex, transport protein; 2.40A {Rattus norvegicus} SCOP: h.1.15.1
Probab=26.59 E-value=1.2e+02 Score=19.05 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=31.9
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 136 SVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMA 180 (211)
Q Consensus 136 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 180 (211)
.++.+...+.++......|-.|.+..-..-++.-..++.+..|+-
T Consensus 30 ~Ld~Ls~~v~rLk~la~~ig~Eld~Qn~~Ld~i~~~~D~~~~rl~ 74 (87)
T 1sfc_D 30 NLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 74 (87)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 356677777777777777888877777666666666666666654
No 78
>1n7s_D SNAP-25A; neuronal snare protein complex, four helix bundle, transport protein; 1.45A {Rattus norvegicus} SCOP: h.1.15.1 PDB: 3rk2_D 3rk3_D 3rl0_D 1kil_D 3hd7_D* 3hd9_D 3ipd_D 1urq_D 1xtg_B
Probab=26.44 E-value=1e+02 Score=18.13 Aligned_cols=45 Identities=9% Similarity=0.115 Sum_probs=33.0
Q ss_pred CCChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 136 SVDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMA 180 (211)
Q Consensus 136 ~~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 180 (211)
.++.+...+.++......|-.|....-..-++.-..++++..++-
T Consensus 11 ~Ld~L~~~v~~lk~la~~ig~El~~Qn~~Ld~l~~~~d~~~~~l~ 55 (66)
T 1n7s_D 11 NLEQVSGIIGNLRHMALDMGNEIDTQNRQIDRIMEKADSNKTRID 55 (66)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 456777888888888888888887777766666666666666653
No 79
>2yko_A LINE-1 ORF1P; RNA-binding protein, genome evolution, nucleic acid chaperon coiled-coil; HET: MSE; 2.10A {Homo sapiens} PDB: 2ykp_A 2ykq_A 2ldy_A
Probab=26.24 E-value=1.7e+02 Score=22.46 Aligned_cols=39 Identities=15% Similarity=0.170 Sum_probs=24.4
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 137 VDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVT 175 (211)
Q Consensus 137 ~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~ 175 (211)
++.+++.+..+++.+.+|.+...-...|-....+.++..
T Consensus 8 vd~~EErIs~le~rleei~q~eq~~ekrik~ne~sL~dL 46 (233)
T 2yko_A 8 CDQLEERVSAAEDEINEIKREGKFREKRIKRNEQSLQEI 46 (233)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 567888888888888888765544444433333334333
No 80
>4ank_A Transthyretin; hormone binding protein, thyroxine transport protein, hormon amyloidosis inhibition; 1.70A {Homo sapiens}
Probab=26.22 E-value=86 Score=22.20 Aligned_cols=58 Identities=17% Similarity=0.188 Sum_probs=29.5
Q ss_pred EEEEEecCCCCCCCCCCceEEEEE--EcCCCC--eEEeeeccceeeEEEEe----eecccEEEEEEecC
Q 028261 46 GKYNVVNPNDGHPLPESHKLTVRV--TSAYGN--SYHYADRVDSGQFAFTA----AEAGDYMACFWAVD 106 (211)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~i~~~v--~~p~g~--~i~~~~~~~~g~~~f~~----~~~G~y~~Cf~n~~ 106 (211)
++-+|.+...|.+ ..+|.+.+ .+++|. .+.+..=..+|+..--. -..|.|++.|+...
T Consensus 32 LTtHVLDt~~G~P---A~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~ll~~~~~~~G~Y~L~F~tg~ 97 (147)
T 4ank_A 32 LMVKVLDAVRGSP---AINVAVHVFRKAADDTWEPFASGKTSESGELHGLTTEEEFVEGIYKVEIDTKS 97 (147)
T ss_dssp EEEEEEETTTTEE---CCSCEEEEEEECTTSCEEEEEEEECCTTSEECCSCCTTTCCSEEEEEEECHHH
T ss_pred eEEEEEeCCCCcC---CCCCEEEEEEECCCCCeEEEEEEEeCCCCCCCCCCCccccCCceEEEEEEHHH
Confidence 3455666543322 23444444 345553 34443323456653211 24699999998753
No 81
>3bid_A UPF0339 protein NMB1088; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.70A {Neisseria meningitidis MC58} SCOP: d.348.1.1
Probab=25.53 E-value=1.1e+02 Score=18.27 Aligned_cols=18 Identities=11% Similarity=0.091 Sum_probs=12.0
Q ss_pred eEEEEEEcCCCCeEEeee
Q 028261 64 KLTVRVTSAYGNSYHYAD 81 (211)
Q Consensus 64 ~i~~~v~~p~g~~i~~~~ 81 (211)
...+.+.+++|++|.+++
T Consensus 12 ~frfrLka~NGevI~sSe 29 (64)
T 3bid_A 12 EYRWRLKAANHEIIAQGE 29 (64)
T ss_dssp CEEEEEECTTSCEEEECC
T ss_pred CEEEEEEeCCCCEEEECC
Confidence 566777777777776543
No 82
>3u1s_H FAB PGT145 heavy chain; IGG, broadly neutralizing antibody, HIV-1 GP120, immune SYST; HET: TYS; 2.30A {Homo sapiens}
Probab=22.89 E-value=1.7e+02 Score=21.89 Aligned_cols=19 Identities=5% Similarity=-0.006 Sum_probs=10.3
Q ss_pred eeeEEEEee-----ecccEEEEEE
Q 028261 85 SGQFAFTAA-----EAGDYMACFW 103 (211)
Q Consensus 85 ~g~~~f~~~-----~~G~y~~Cf~ 103 (211)
.+.++.... ..|.|..=+.
T Consensus 99 ~~~~sL~I~~v~~~DsG~Y~C~~~ 122 (267)
T 3u1s_H 99 ASTVYMELRGLTADDTAIYYCLTG 122 (267)
T ss_dssp GCCEEEEECSCCGGGCEEEEEEEE
T ss_pred CCEEEEEECCCChhhCEEEEEEEC
Confidence 345555442 4677765554
No 83
>1f7l_A Holo-(acyl carrier protein) synthase; 9-strand pseudo beta barrel protein, COA complex protein, CO complex, transferase; HET: COA; 1.50A {Bacillus subtilis} SCOP: d.150.1.2 PDB: 1f7t_A 1f80_A*
Probab=22.59 E-value=1.7e+02 Score=19.17 Aligned_cols=36 Identities=11% Similarity=0.272 Sum_probs=23.7
Q ss_pred EcCCCCeEEeeeccceeeEEEEeeecccEEEEEEec
Q 028261 70 TSAYGNSYHYADRVDSGQFAFTAAEAGDYMACFWAV 105 (211)
Q Consensus 70 ~~p~g~~i~~~~~~~~g~~~f~~~~~G~y~~Cf~n~ 105 (211)
.+|.|++.....+.....+.++...+|.|.+|+-..
T Consensus 81 ~~~~G~P~l~~~~~~~~~~~~SiSH~~~~a~A~v~~ 116 (121)
T 1f7l_A 81 KDQNGKPYIICTKLSPAAVHVSITHTKEYAAAQVVI 116 (121)
T ss_dssp ECTTSCEEEEETTTEEEEEEEEEEECSSEEEEEEEE
T ss_pred ECCCCCcEEEECccccCcEEEEEeCCCCcEEEEEEE
Confidence 467787766544332346777788888998887543
No 84
>3swf_A CGMP-gated cation channel alpha-1; coiled-coil, assembly domain, transport protein; 2.14A {Bos taurus}
Probab=22.44 E-value=1.5e+02 Score=18.39 Aligned_cols=27 Identities=19% Similarity=0.193 Sum_probs=12.6
Q ss_pred ChHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 138 DVMELELKKLYDTVSSIHQEMFYLRER 164 (211)
Q Consensus 138 ~~l~~~l~~l~~~l~~i~~~q~~~~~r 164 (211)
+.++..|+.|+.++..+..+..-.+.+
T Consensus 10 ~~LE~sld~LQTrfARLLaEy~ssQ~K 36 (74)
T 3swf_A 10 TRMESSVDLLQTRFARILAEYESMQQK 36 (74)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345555555555555554443333333
No 85
>2k49_A UPF0339 protein SO_3888; solution structure, structural genomics, unknown functio protein structure initiative; NMR {Shewanella oneidensis} SCOP: d.348.1.1 d.348.1.1
Probab=22.36 E-value=1.9e+02 Score=19.58 Aligned_cols=54 Identities=11% Similarity=0.150 Sum_probs=37.0
Q ss_pred EEEEEecCCCCCCCCCCceEEEEEEcCCCCeEEeeec------------------cceeeEEEEeeecccEEEEEEecC
Q 028261 46 GKYNVVNPNDGHPLPESHKLTVRVTSAYGNSYHYADR------------------VDSGQFAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 46 ~~y~v~~~~~~~~~~~~~~i~~~v~~p~g~~i~~~~~------------------~~~g~~~f~~~~~G~y~~Cf~n~~ 106 (211)
+.|++.... +....+.+..++|++|.+++. .....|.......|.|.|=+....
T Consensus 3 g~FEi~~~~-------~g~~rFrLka~NgeiI~sSe~Y~sk~~a~~gI~sVk~na~~~~~fe~~~~~~gk~yF~Lka~N 74 (118)
T 2k49_A 3 GWYELSKSS-------NDQFKFVLKAGNGEVILTSELYTGKSGAMNGIESVQTNSPIEARYAKEVAKNDKPYFNLKAAN 74 (118)
T ss_dssp CEEEEEECT-------TSCEEEEEECSSSCEEEECCCBSSHHHHHHHHHHHHHHTTCGGGEEEEEETTTEEEEEEECTT
T ss_pred ceEEEEEcC-------CCCEEEEEEECCCCEEEECCCcCCHHHHHHHHHHHHHhCcccceEEEEEccCCCEEEEEEcCC
Confidence 457776543 346788999999999876432 124578877778888887666544
No 86
>4gym_A Glyoxalase/bleomycin resistance protein/dioxygena; PSI-biology, midwest center for structural genomics, MCSG, oxidoreductase; HET: MSE; 1.56A {Conexibacter woesei}
Probab=22.15 E-value=48 Score=22.45 Aligned_cols=14 Identities=7% Similarity=0.036 Sum_probs=11.7
Q ss_pred eEEEEEEcCCCCeE
Q 028261 64 KLTVRVTSAYGNSY 77 (211)
Q Consensus 64 ~i~~~v~~p~g~~i 77 (211)
...+.++||+|+.+
T Consensus 115 ~~~~~f~DPDGn~i 128 (149)
T 4gym_A 115 MYGRSFHDLDGHLW 128 (149)
T ss_dssp EEEEEEECTTCCEE
T ss_pred EEEEEEEcCCCCEE
Confidence 46788999999976
No 87
>2j3s_A Filamin-A; cytoskeleton, phosphorylation, structural protein; 2.5A {Homo sapiens} SCOP: b.1.18.10 b.1.18.10 PDB: 2e9i_A
Probab=21.85 E-value=2.8e+02 Score=21.42 Aligned_cols=43 Identities=14% Similarity=0.312 Sum_probs=29.5
Q ss_pred ceEEEEEEcCCCCeEEeeeccceee--EEEEeeecccEEEEEEecC
Q 028261 63 HKLTVRVTSAYGNSYHYADRVDSGQ--FAFTAAEAGDYMACFWAVD 106 (211)
Q Consensus 63 ~~i~~~v~~p~g~~i~~~~~~~~g~--~~f~~~~~G~y~~Cf~n~~ 106 (211)
..+.+.|.+|++-.+.-. +..+|. .+|+++.+|.|.+-..-..
T Consensus 37 g~l~v~i~~p~~~~~~~~-d~~dGty~v~y~p~~~G~y~i~V~~~g 81 (288)
T 2j3s_A 37 GGLSLSIEGPSKVDINTE-DLEDGTCRVTYCPTEPGNYIINIKFAD 81 (288)
T ss_dssp CCEEEEEESSSCCEEEEE-ECTTSEEEEEEECSSCEEEEEEEEETT
T ss_pred CcEEEEEECCCCceeEEE-ECCCCEEEEEEECCCCeEEEEEEEECC
Confidence 467888889987554332 234554 4578889999998877553
No 88
>3ogk_Q JAZ1 incomplete degron peptide; leucine rich repeat, ubiquitin ligase, SCF, protein binding; HET: OGK; 2.80A {Arabidopsis thaliana}
Probab=21.49 E-value=30 Score=16.17 Aligned_cols=10 Identities=50% Similarity=0.863 Sum_probs=7.1
Q ss_pred HHHHHhhhcc
Q 028261 200 HLKTFFEKKK 209 (211)
Q Consensus 200 ~lk~fF~~Kk 209 (211)
.|.+|++++|
T Consensus 4 SLqRFleKRk 13 (22)
T 3ogk_Q 4 SLHRFLEKRK 13 (26)
T ss_pred hHHHHHHHHH
Confidence 4678888765
No 89
>1l4a_D S-SNAP25 fusion protein; snare, snare complex, membrane fusion, neurotransmission, endocytosis/exocytosis complex; 2.95A {Loligo pealei} SCOP: h.1.15.1
Probab=21.42 E-value=1.6e+02 Score=18.56 Aligned_cols=44 Identities=11% Similarity=0.154 Sum_probs=29.5
Q ss_pred CChHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 137 VDVMELELKKLYDTVSSIHQEMFYLREREEEMQELNRVTNSRMA 180 (211)
Q Consensus 137 ~~~l~~~l~~l~~~l~~i~~~q~~~~~re~~~~~~~es~~~rv~ 180 (211)
++.+...+.+|......|..|....-..-++.-..++.+..|+-
T Consensus 32 Ld~ls~~l~rLk~mA~~mg~Eld~Qn~~LD~i~~~~D~~~~rl~ 75 (87)
T 1l4a_D 32 MKEVSSMIGNLRNMAIDMGNEIGSQNRQVDRIQQKAESNESRID 75 (87)
T ss_dssp HHHHHTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 55666666677777777777777666666666666666666653
No 90
>2pnv_A Small conductance calcium-activated potassium channel protein 2; leucine zipper, SKCA channel, membrane protein; 2.10A {Rattus norvegicus}
Probab=21.26 E-value=1.1e+02 Score=16.71 Aligned_cols=18 Identities=11% Similarity=0.119 Sum_probs=10.0
Q ss_pred hHHHHHHHHHHHHHHHHH
Q 028261 139 VMELELKKLYDTVSSIHQ 156 (211)
Q Consensus 139 ~l~~~l~~l~~~l~~i~~ 156 (211)
.+++.+..|+.++..+..
T Consensus 20 ~LE~Ri~~LE~KLd~L~~ 37 (43)
T 2pnv_A 20 DFEKRIVTLETKLETLIG 37 (43)
T ss_dssp HHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHH
Confidence 455555555555555544
No 91
>2oxj_A Hybrid alpha/beta peptide based on the GCN4-P1 Se heptad positions B and F substituted...; helix bundle, foldamer, unknown function; HET: B3K B3D B3E B3S B3Y B3X B3A BAL; 2.00A {Synthetic} PDB: 2oxk_A*
Probab=20.39 E-value=1e+02 Score=15.88 Aligned_cols=27 Identities=11% Similarity=0.209 Sum_probs=14.5
Q ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 144 LKKLYDTVSSIHQEMFYLREREEEMQE 170 (211)
Q Consensus 144 l~~l~~~l~~i~~~q~~~~~re~~~~~ 170 (211)
|++|++.+..+..+-.-+...-.+.+.
T Consensus 3 MnQLE~kVEeLl~~n~~Le~eV~rLk~ 29 (34)
T 2oxj_A 3 MXQLEXKVXELLXKNXHLEXEVXRLKX 29 (34)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhhhHHHHHHHHHH
Confidence 556666666665555555444444443
No 92
>1gd2_E Transcription factor PAP1; basic leucine zipper, protein-DNA complex, transcription/DNA complex; HET: DNA; 2.00A {Schizosaccharomyces pombe} SCOP: h.1.3.1
Probab=20.01 E-value=95 Score=18.96 Aligned_cols=30 Identities=23% Similarity=0.216 Sum_probs=17.2
Q ss_pred cCCCChHHHHHHHHHHHHHHHHHHHHHHHH
Q 028261 134 KGSVDVMELELKKLYDTVSSIHQEMFYLRE 163 (211)
Q Consensus 134 ~e~~~~l~~~l~~l~~~l~~i~~~q~~~~~ 163 (211)
..++..++..+..++.....+..+-..++.
T Consensus 28 ~~~i~~LE~~v~~le~~~~~l~~en~~Lr~ 57 (70)
T 1gd2_E 28 EDHLKALETQVVTLKELHSSTTLENDQLRQ 57 (70)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 345666666666666655555555444443
Done!