BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028262
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q9CXW3|CYBP_MOUSE Calcyclin-binding protein OS=Mus musculus GN=Cacybp PE=1 SV=1
Length = 229
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 73/219 (33%), Positives = 112/219 (51%), Gaps = 27/219 (12%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE--------------EGPAPVP 48
E+L DLEE++ L + R R+ + SE +E K E PA V
Sbjct: 6 EELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKNKMQQKSQKKPELDNEKPAAVV 65
Query: 49 TPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHD 105
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+ +
Sbjct: 66 APLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKN 120
Query: 106 VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKP 160
+ GKNY L + I E S VK V+I+ K ++ D + ++K KP
Sbjct: 121 LNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKP 180
Query: 161 NLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 181 SYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219
>sp|Q3T168|CYBP_BOVIN Calcyclin-binding protein OS=Bos taurus GN=CACYBP PE=2 SV=1
Length = 230
Score = 102 bits (253), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 72/220 (32%), Positives = 115/220 (52%), Gaps = 28/220 (12%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAPV 47
E+L DLEE++ L A R R+ + +E +E +L++ E PA V
Sbjct: 6 EELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEMKNKMQQKSQRKAELTENEKPAAV 65
Query: 48 PTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFH 104
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 66 VAPITTGYT-----VKISNYGWDQSDKFVKIYITLPGVHQVPAESVQVNFTERSFDLLVK 120
Query: 105 DVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLK 159
++ GK+Y L + I E S VK V+I+ K ++ D + ++K K
Sbjct: 121 NLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKAENTRWDYLTQVEKECKEKEK 180
Query: 160 PNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
P+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 181 PSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 220
>sp|Q6AYK6|CYBP_RAT Calcyclin-binding protein OS=Rattus norvegicus GN=Cacybp PE=1 SV=1
Length = 229
Score = 100 bits (250), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 72/219 (32%), Positives = 115/219 (52%), Gaps = 27/219 (12%)
Query: 3 EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE-----KLSKE---------EGPAPVP 48
E+L DLEE++ L + R R+ + +E +E K+ ++ E PA V
Sbjct: 6 EELQKDLEEVKVLLEKSTRKRLRDTLTNEKSKIETELRNKMQQKSQKKPEFDNEKPAAVV 65
Query: 49 TPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKFHD 105
P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+ +
Sbjct: 66 APLTTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPAENVQVHFTERSFDLLVKN 120
Query: 106 VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKLKP 160
+ GKNY L + I E S VK V+I+ K ++ D + ++K KP
Sbjct: 121 LNGKNYSMIVNNLLKPISVESSSKKVKTDTVIILCRKKAENTRWDYLTQVEKECKEKEKP 180
Query: 161 NLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 181 SYDTEADPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 219
>sp|Q4R4P3|CYBP_MACFA Calcyclin-binding protein OS=Macaca fascicularis GN=CACYBP PE=2
SV=1
Length = 228
Score = 100 bits (248), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLSGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + ++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 178 KPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q9HB71|CYBP_HUMAN Calcyclin-binding protein OS=Homo sapiens GN=CACYBP PE=1 SV=2
Length = 228
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 113/221 (51%), Gaps = 28/221 (12%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + ++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKECKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 178 KPSYDTETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q5R6Z8|CYBP_PONAB Calcyclin-binding protein OS=Pongo abelii GN=CACYBP PE=2 SV=1
Length = 228
Score = 100 bits (248), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 72/221 (32%), Positives = 114/221 (51%), Gaps = 28/221 (12%)
Query: 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLE---------------KLSKEEGPAP 46
+E+L DLEE++ L A R R+ + +E +E +L E PA
Sbjct: 3 SEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKNKMQQKSQKKAELLDNEKPAA 62
Query: 47 VPTPAKVSSTPALNYITLGSFSWDQDNEKVKIYISLEGVVQ---DKMEAEFKQWSFDVKF 103
V P T + + ++ WDQ ++ VKIYI+L GV Q + ++ F + SFD+
Sbjct: 63 VVAPITTGYT-----VKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLV 117
Query: 104 HDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDL-----QYKEDKL 158
++ GK+Y L + I E S VK V+I+ K + D + +++K
Sbjct: 118 KNLNGKSYSMIVNNLLKPISVEGSSKKVKTDTVLILCRKKVENTRWDYLTQVEKERKEKE 177
Query: 159 KPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
KP+ D E DP G+M+++K +YE+GDD+MKRTI KAW ++R
Sbjct: 178 KPSYDAETDPSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 218
>sp|Q9SUR9|SGT1A_ARATH Protein SGT1 homolog A OS=Arabidopsis thaliana GN=SGT1A PE=1 SV=1
Length = 350
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/193 (21%), Positives = 84/193 (43%), Gaps = 39/193 (20%)
Query: 44 PAPVPTPAKVSSTPA--LNYITLGSF--SWDQDNEKVKIYISLEGVVQDKMEAEFKQWSF 99
P P P+ V++ P L+ + + Q E+V + + +G+ + + +F +
Sbjct: 127 PVPSTLPSSVTAPPVSELDVTPTAKYRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQIL 186
Query: 100 DVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDLQYKE---- 155
V +V G++ + PRL +I+P+K K V T++ I L KA W L++ +
Sbjct: 187 SVVI-EVPGEDAYYLQPRLFGKIIPDKCKYEVLSTKIEICLAKADIITWASLEHGKGPAV 245
Query: 156 -------------------------DKLKPNLDK-ERDPM----AGIMDLMKNMYEEGDD 185
DKL+ + K E+D A + + +Y+ D+
Sbjct: 246 LPKPNVSSEVSQRPAYPSSKKVKDWDKLEAEVKKQEKDEKLEGDAALNKFFREIYQNADE 305
Query: 186 EMKRTIAKAWTDA 198
+M+R ++K++ ++
Sbjct: 306 DMRRAMSKSFVES 318
>sp|Q9SUT5|SGT1B_ARATH Protein SGT1 homolog B OS=Arabidopsis thaliana GN=SGT1B PE=1 SV=1
Length = 358
Score = 40.0 bits (92), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 38/162 (23%), Positives = 67/162 (41%), Gaps = 35/162 (21%)
Query: 71 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVL 130
Q E+ + I + V ++ + EF + V DV G+ PRL +I+PEK +
Sbjct: 166 QKPEEAVVTIFAKKVPKENVTVEFGEQILSVVI-DVAGEEAYHLQPRLFGKIIPEKCRFE 224
Query: 131 VKPTRVVIMLFKASKGNWLDLQYKEDKL---KPNL------------------------- 162
V T+V I L KA W L+Y + + KPN+
Sbjct: 225 VLSTKVEIRLAKAEIITWASLEYGKGQSVLPKPNVSSALSQRPVYPSSKPAKDWDKLEAE 284
Query: 163 ------DKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDA 198
D++ D A + ++Y D++M+R + K++ ++
Sbjct: 285 VKKQEKDEKLDGDAAMNKFFSDIYSSADEDMRRAMNKSFAES 326
>sp|Q0JL44|SGT1_ORYSJ Protein SGT1 homolog OS=Oryza sativa subsp. japonica GN=SGT1 PE=1
SV=1
Length = 367
Score = 38.9 bits (89), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 26/79 (32%), Positives = 40/79 (50%), Gaps = 1/79 (1%)
Query: 75 KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT 134
+V + I +GV + + +F + V +V G+ PRL +I+PEKS+ V T
Sbjct: 178 EVVLTIFAKGVPAENVVVDFGEQMLSVSI-EVPGEEPYHFQPRLFSKIIPEKSRYQVLST 236
Query: 135 RVVIMLFKASKGNWLDLQY 153
+V I L KA + W L Y
Sbjct: 237 KVEIRLAKAEQITWTSLDY 255
>sp|Q14993|COJA1_HUMAN Collagen alpha-1(XIX) chain OS=Homo sapiens GN=COL19A1 PE=1 SV=3
Length = 1142
Score = 33.9 bits (76), Expect = 0.83, Method: Composition-based stats.
Identities = 15/48 (31%), Positives = 32/48 (66%)
Query: 118 LNQEIVPEKSKVLVKPTRVVIMLFKASKGNWLDLQYKEDKLKPNLDKE 165
LNQ+ +P+ S V+ +VV +F+A++G+ L+ ++ +L+P D++
Sbjct: 123 LNQQNIPQISIVVDGGKKVVEFMFQATEGDVLNYIFRNRELRPLFDRQ 170
>sp|Q9Y2Z0|SUGT1_HUMAN Suppressor of G2 allele of SKP1 homolog OS=Homo sapiens GN=SUGT1
PE=1 SV=3
Length = 365
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 38/168 (22%), Positives = 65/168 (38%), Gaps = 34/168 (20%)
Query: 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK 126
+ W Q +V I + ++ V ++ + EF + G++Y L+ I+PE+
Sbjct: 174 YDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKLELLH-PIIPEQ 232
Query: 127 SKVLVKPTRVVIMLFKASKGNWLDLQYKEDKLKP--------NLDKERDPM--------- 169
S V T++ I L K W L+ + D P NL P
Sbjct: 233 STFKVLSTKIEIKLKKPEAVRWEKLEGQGDVPTPKQFVADVKNLYPSSSPYTRNWDKLVG 292
Query: 170 --------------AGIMDLMKNMYEEGDDEMKRTIAKAWTDARSGKT 203
A + L + +Y +G DE+KR + K++ + SG T
Sbjct: 293 EIKEEEKNEKLEGDAALNRLFQQIYSDGSDEVKRAMNKSFME--SGGT 338
>sp|O59709|GIT7_SCHPO Glucose-insensitive transcription protein 7 OS=Schizosaccharomyces
pombe (strain 972 / ATCC 24843) GN=git7 PE=4 SV=2
Length = 379
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 34/165 (20%), Positives = 65/165 (39%), Gaps = 32/165 (19%)
Query: 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK 126
+ W Q + + I I + V + + ++ + ++ G + L +EIVPEK
Sbjct: 186 YDWSQTSFSLNIDIYAKKVKDEDVSLLMEKNTLKIEIKLEDGSIFSLVLDPLYEEIVPEK 245
Query: 127 SKVLVKPTRVVIMLFK-----------------------------ASKGNWLDLQYKEDK 157
S + ++V I L K ++ GN + D
Sbjct: 246 SSFKLFSSKVEITLIKKVSEIKWEALVKSPANNSVNVYAKDSNHSSASGNTKNKAKDWDS 305
Query: 158 LKPNLDKERDPMAG---IMDLMKNMYEEGDDEMKRTIAKAWTDAR 199
L D E D G + +L +N+Y+ DD+ +R + K++T++
Sbjct: 306 LAKLADLEEDEPTGEAALANLFQNLYKNADDDTRRAMMKSYTESN 350
>sp|B8NX76|VPS10_ASPFN Vacuolar protein sorting/targeting protein 10 OS=Aspergillus flavus
(strain ATCC 200026 / FGSC A1120 / NRRL 3357 / JCM 12722
/ SRRC 167) GN=vps10 PE=3 SV=1
Length = 1488
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 50 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 97
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|Q2TVY7|VPS10_ASPOR Vacuolar protein sorting/targeting protein 10 OS=Aspergillus oryzae
(strain ATCC 42149 / RIB 40) GN=vps10 PE=3 SV=1
Length = 1488
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 29/52 (55%), Gaps = 4/52 (7%)
Query: 50 PAKVSSTP---ALNYITLGSFSWDQDNEKVKIYISLEGVVQDKMEA-EFKQW 97
P V++TP +L +I +GS QD E V I +G+ + K E +F++W
Sbjct: 501 PTMVTTTPDSTSLKFIVVGSLKESQDGEHVIYSIDFDGLHERKCEEDDFEKW 552
>sp|B1HN90|ADDA_LYSSC ATP-dependent helicase/nuclease subunit A OS=Lysinibacillus
sphaericus (strain C3-41) GN=addA PE=3 SV=1
Length = 1238
Score = 31.2 bits (69), Expect = 5.4, Method: Compositional matrix adjust.
Identities = 12/30 (40%), Positives = 19/30 (63%)
Query: 136 VVIMLFKASKGNWLDLQYKEDKLKPNLDKE 165
++ LF+ GNW+ L YK D++ P+ KE
Sbjct: 1163 IIDCLFEDEYGNWVLLDYKTDRILPHFAKE 1192
>sp|Q9UKP3|ITBP2_HUMAN Integrin beta-1-binding protein 2 OS=Homo sapiens GN=ITGB1BP2 PE=2
SV=1
Length = 347
Score = 31.2 bits (69), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 19/29 (65%)
Query: 125 EKSKVLVKPTRVVIMLFKASKGNWLDLQY 153
E+S V + P+RV I L KA G+W L++
Sbjct: 277 EQSSVFLMPSRVEISLVKADPGSWAQLEH 305
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.314 0.132 0.380
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 81,635,510
Number of Sequences: 539616
Number of extensions: 3447318
Number of successful extensions: 8201
Number of sequences better than 100.0: 26
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 13
Number of HSP's that attempted gapping in prelim test: 8168
Number of HSP's gapped (non-prelim): 28
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.9 bits)
S2: 59 (27.3 bits)