Query 028262
Match_columns 211
No_of_seqs 302 out of 958
Neff 6.6
Searched_HMMs 29240
Date Mon Mar 25 14:17:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028262.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028262hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2o30_A Nuclear movement protei 99.9 1.4E-25 4.9E-30 175.2 9.8 124 64-203 4-130 (131)
2 1x5m_A Calcyclin-binding prote 99.9 4.3E-25 1.5E-29 171.6 11.7 100 58-157 14-117 (127)
3 2xcm_C SGT1-like protein, cyto 99.9 1.6E-22 5.4E-27 147.6 10.1 88 65-153 3-90 (92)
4 1rl1_A Suppressor of G2 allele 99.9 1E-21 3.5E-26 149.1 9.3 95 63-158 8-102 (114)
5 1ejf_A Progesterone receptor P 99.8 2.5E-21 8.6E-26 149.9 9.5 96 66-164 5-105 (125)
6 1wh0_A Ubiquitin carboxyl-term 99.8 3.8E-21 1.3E-25 151.0 10.0 93 62-155 17-122 (134)
7 2kmw_A Uncharacterized protein 99.8 3.3E-21 1.1E-25 153.9 8.2 96 65-164 5-105 (150)
8 1wgv_A KIAA1068 protein; CS do 99.8 8.5E-20 2.9E-24 141.1 11.3 95 63-158 18-115 (124)
9 1wfi_A Nuclear distribution ge 99.8 1.6E-20 5.4E-25 146.4 5.4 117 64-195 7-129 (131)
10 2cg9_X CO-chaperone protein SB 99.8 3.4E-20 1.2E-24 145.4 4.8 99 64-165 6-123 (134)
11 2rh0_A NUDC domain-containing 99.7 8.8E-18 3E-22 135.0 10.9 116 61-201 10-130 (157)
12 3qor_A Nuclear migration prote 99.7 1.2E-17 4.2E-22 128.5 10.6 91 62-156 14-109 (121)
13 2jtt_C Calcyclin-binding prote 99.7 2.2E-18 7.6E-23 104.5 2.9 34 166-199 2-35 (35)
14 1ysm_A Calcyclin-binding prote 99.5 4.3E-15 1.5E-19 105.7 5.0 40 2-41 5-44 (77)
15 2a26_A Calcyclin-binding prote 99.5 3.3E-14 1.1E-18 93.1 5.2 41 1-41 4-45 (50)
16 3gla_A Low molecular weight he 98.3 1E-05 3.6E-10 59.0 10.8 80 65-145 5-99 (100)
17 4fei_A Heat shock protein-rela 98.1 3.4E-05 1.2E-09 56.7 11.3 80 65-145 7-96 (102)
18 2k8q_A Protein SHQ1; beta-sand 98.1 6.5E-06 2.2E-10 64.0 6.3 83 64-152 3-91 (134)
19 3aab_A Putative uncharacterize 98.0 3.5E-05 1.2E-09 58.5 9.9 81 64-145 24-117 (123)
20 3eud_A Protein SHQ1; CS domain 97.9 0.00011 3.8E-09 55.5 10.2 84 63-152 16-105 (115)
21 4eld_A MJ16.5-P1, small heat s 97.8 0.0002 6.7E-09 56.8 10.8 81 64-145 56-152 (161)
22 1gme_A Heat shock protein 16.9 97.7 0.00022 7.6E-09 56.0 9.5 82 63-145 42-139 (151)
23 2wj5_A Heat shock protein beta 97.7 0.00019 6.7E-09 52.6 8.0 78 67-145 4-90 (101)
24 3l1e_A Alpha-crystallin A chai 97.5 0.00064 2.2E-08 50.3 9.1 78 67-145 5-91 (106)
25 3q9p_A Heat shock protein beta 97.4 0.0015 5.2E-08 46.3 9.4 73 70-143 3-84 (85)
26 2y1y_A Alpha-crystallin B chai 97.2 0.001 3.4E-08 47.6 6.7 74 71-145 3-85 (90)
27 2klr_A Alpha-crystallin B chai 96.8 0.0028 9.4E-08 51.1 7.2 78 67-145 66-152 (175)
28 2bol_A TSP36, small heat shock 96.5 0.012 4.1E-07 51.6 9.5 81 65-146 99-191 (314)
29 2bol_A TSP36, small heat shock 91.7 0.54 1.8E-05 41.0 7.8 71 72-143 231-313 (314)
30 2yf2_A C4B binding protein; im 62.9 9 0.00031 24.9 3.7 25 9-40 27-51 (65)
31 1q08_A Zn(II)-responsive regul 48.8 22 0.00076 24.5 4.2 34 8-41 18-57 (99)
32 1sz9_A PCF11 protein; RNA poly 43.3 19 0.00064 27.4 3.3 27 169-195 83-109 (144)
33 3isy_A Bsupi, intracellular pr 41.0 29 0.001 25.8 4.0 63 69-134 13-77 (120)
34 3d0w_A YFLH protein; GRAM-posi 37.3 37 0.0013 24.7 3.9 34 165-198 67-100 (104)
35 2lw9_A Unconventionnal myosin- 28.7 20 0.00068 22.6 1.0 26 13-38 26-51 (51)
36 1lq7_A Alpha3W; three helix bu 25.0 1.3E+02 0.0043 19.3 4.4 38 2-40 27-65 (67)
37 2lf0_A Uncharacterized protein 24.8 89 0.003 23.3 4.1 41 1-41 4-54 (123)
38 3gp4_A Transcriptional regulat 22.9 1E+02 0.0034 23.0 4.3 34 8-41 61-99 (142)
39 3gpv_A Transcriptional regulat 21.3 1.1E+02 0.0037 22.9 4.3 34 8-41 75-113 (148)
40 1g6u_A Domain swapped dimer; d 20.8 1.5E+02 0.005 17.9 3.8 32 10-41 7-38 (48)
41 4fnv_A Heparinase III protein, 20.3 1.4E+02 0.0048 28.4 5.7 40 75-115 655-700 (702)
42 2l3l_A Tubulin-specific chaper 20.3 1.9E+02 0.0065 20.9 5.2 38 4-41 39-76 (111)
No 1
>2o30_A Nuclear movement protein; MCSG, structural genomics, PSI-2, structure initiative; 1.66A {Encephalitozoon cuniculi}
Probab=99.92 E-value=1.4e-25 Score=175.22 Aligned_cols=124 Identities=14% Similarity=0.177 Sum_probs=74.3
Q ss_pred ccceeEeecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCeEEEEEee
Q 028262 64 LGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 142 (211)
Q Consensus 64 i~~y~W~Qt~~~V~I~I~lk-~v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 142 (211)
.++|.|+||.+.|+|+|+++ |++++++.|+|++++|+|.+. |.+ .+. ++||++|+|++|+|++.+++|+|+|.|
T Consensus 4 ~~~y~W~Qt~~~V~i~I~lp~~~~~kdv~V~i~~~~l~v~~~---g~~-~~~-~~L~~~I~~e~S~w~i~~~kv~i~L~K 78 (131)
T 2o30_A 4 EAKYTWDQELNEINIQFPVTGDADSSAIKIRMVGKKICVKNQ---GEI-VID-GELLHEVDVSSLWWVINGDVVDVNVTK 78 (131)
T ss_dssp -CCCEEEEETTEEEEEEECC---CCSCEEEEEETTEEEEEET---TEE-EEE-EEBSSCEEEEEEEEEEETTEEEEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCCccceEEEEECCEEEEEEC---CEe-eEc-cccccccccccCEEEEeCCEEEEEEEE
Confidence 36899999999999999995 888999999999999999984 455 454 599999999999999999999999999
Q ss_pred cCCCCcccccccCCccCCCCCCCCCCc-hh-HHHHHHHHhcCCCHHHHHHHHHHHHHhcCCCC
Q 028262 143 ASKGNWLDLQYKEDKLKPNLDKERDPM-AG-IMDLMKNMYEEGDDEMKRTIAKAWTDARSGKT 203 (211)
Q Consensus 143 ~~~~~W~~L~~~e~k~kp~~d~~~dp~-~~-l~~l~k~iY~~gDde~kRam~Ks~~ES~~k~~ 203 (211)
+...+|++|...+.++.+ .+ .+|+ .+ | +++|+|||++|.|+|+++|+|++
T Consensus 79 ~~~~~W~~L~~~~~~id~--~k-~~~e~~~~l--------~dld~e~~~~v~k~~~d~~qk~~ 130 (131)
T 2o30_A 79 KRNEWWDSLLVGSESVDV--QK-LAENKHADM--------SMLDAEAREVVEKMMHNTSGKDS 130 (131)
T ss_dssp SSCCCCSCSBC----------------------------------------------------
T ss_pred CCCCCCccccCCCCCCCH--hH-cCccccccc--------ccCCHHHHHHHHHHHHHHHHhhc
Confidence 955699999976543322 21 3455 44 5 56799999999999999999975
No 2
>1x5m_A Calcyclin-binding protein; CS domain, structural genomics, NPPSFA national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=4.3e-25 Score=171.59 Aligned_cols=100 Identities=30% Similarity=0.501 Sum_probs=91.2
Q ss_pred ccceeeccceeEeecCCEEEEEEEeCCC---CCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCC
Q 028262 58 ALNYITLGSFSWDQDNEKVKIYISLEGV---VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT 134 (211)
Q Consensus 58 ~~~~~~i~~y~W~Qt~~~V~I~I~lk~v---~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~ 134 (211)
..+++.+++|+|+|+.+.|+|+|+++++ +++++.|+|++++|+|.+.+.+|++|.|.+.+||++|+|++|+|++.++
T Consensus 14 ~~y~~~~~~y~W~Qt~~~V~i~I~l~~~~~~~~~~v~V~~~~~~l~v~~~~~~~~~y~~~~~~L~~~I~~e~S~~~v~~~ 93 (127)
T 1x5m_A 14 TGYTVKISNYGWDQSDKFVKIYITLTGVHQVPTENVQVHFTERSFDLLVKNLNGKSYSMIVNNLLKPISVEGSSKKVKTD 93 (127)
T ss_dssp CCCCEECCSCEEEEETTEEEEEEECTTTTTSCTTSEEEEECSSEEEEEECSCSSSCEEEEEECBSSCCCTTTCEEEEETT
T ss_pred cccccCccEEEEEcCCCEEEEEEEeCCCCcCCccccEEEEEcCEEEEEEEcCCCCcEEEEhHHhcCccCcccCEEEEeCC
Confidence 3455889999999999999999999998 8899999999999999998778889999986799999999999999999
Q ss_pred eEEEEEeecCCC-CcccccccCCc
Q 028262 135 RVVIMLFKASKG-NWLDLQYKEDK 157 (211)
Q Consensus 135 kIeI~L~K~~~~-~W~~L~~~e~k 157 (211)
+|+|+|+|++++ +|++|+..+.+
T Consensus 94 kVei~L~K~~~~~~W~~L~~~~~k 117 (127)
T 1x5m_A 94 TVLILCRKKVENTRWDYLTQVEKE 117 (127)
T ss_dssp EEEEEEECSSSSCCCSSSBHHHHH
T ss_pred EEEEEEEECCCCCCCCcccccccc
Confidence 999999999987 99999965543
No 3
>2xcm_C SGT1-like protein, cytosolic heat shock protein 90; chaperone-protein binding complex, stress response; HET: ADP; 2.20A {Arabidopsis thaliana} PDB: 2jki_S*
Probab=99.88 E-value=1.6e-22 Score=147.55 Aligned_cols=88 Identities=24% Similarity=0.340 Sum_probs=83.3
Q ss_pred cceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCeEEEEEeecC
Q 028262 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 144 (211)
Q Consensus 65 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 144 (211)
++|+|+||.+.|+|+|+++|+.++++.|+|++++|+|.+.+.+|++|.+.+ +||++|+|++|+|++.+++|+|+|.|++
T Consensus 3 ~~~~W~Qt~~~V~v~i~~~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~~~s~~~~~~~~l~i~L~K~~ 81 (92)
T 2xcm_C 3 YRHEYYQKPEEVVVTVFAKGIPKQNVNIDFGEQILSVVIEVPGEDAYYLQP-RLFGKIIPDKCKYEVLSTKIEICLAKAD 81 (92)
T ss_dssp SEEEEEEETTEEEEEEECCSCCGGGEEEEECSSBEEEEECCTTSCCEEECC-BBSSCBCGGGCEEEECSSCEEEEEEBSS
T ss_pred ccccEEeCCCEEEEEEEECCCChHHeEEEEECCEEEEEEEcCCCcEEEEee-EcCCccCchhEEEEEECCEEEEEEEcCC
Confidence 589999999999999999999999999999999999999766778899988 9999999999999999999999999999
Q ss_pred CCCcccccc
Q 028262 145 KGNWLDLQY 153 (211)
Q Consensus 145 ~~~W~~L~~ 153 (211)
+++|++|++
T Consensus 82 ~~~W~~L~~ 90 (92)
T 2xcm_C 82 IITWASLEH 90 (92)
T ss_dssp SCCCSCSBT
T ss_pred CCcchhccc
Confidence 899999985
No 4
>1rl1_A Suppressor of G2 allele of SKP1 homolog; beta sandwich, 7 beta strands, similar to P23, lacking LAST beta strand SEEN in P23, protein degradation; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.86 E-value=1e-21 Score=149.08 Aligned_cols=95 Identities=23% Similarity=0.378 Sum_probs=86.0
Q ss_pred eccceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCeEEEEEee
Q 028262 63 TLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFK 142 (211)
Q Consensus 63 ~i~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K 142 (211)
..++|+|+|+.+.|+|+|+++|+.++++.|+|++++|+|.+...+|+.|.+.+ +||++|+|++|+|++.+++|+|+|.|
T Consensus 8 ~~~~~~W~Qt~~~V~v~i~l~~v~~~~v~v~~~~~~l~v~~~~~~~~~y~~~~-~L~~~I~~e~s~~~~~~~~l~i~L~K 86 (114)
T 1rl1_A 8 SKIKYDWYQTESQVVITLMIKNVQKNDVNVEFSEKELSALVKLPSGEDYNLKL-ELLHPIIPEQSTFKVLSTKIEIKLKK 86 (114)
T ss_dssp CCCCEEEEECSSEEEEEECCCSCCGGGEEEECSSSCEEEEEECTTSSEEEEEE-CBSSCCCGGGEEEEECSSSEEEEEEC
T ss_pred CCCCccEEeCCCEEEEEEEeCCCCHHHCEEEEEcCEEEEEEEeCCCcEEEEEe-eCCCcCCccccEEEEECCEEEEEEEc
Confidence 45689999999999999999999999999999999999999766678999988 99999999999999999999999999
Q ss_pred cCCCCcccccccCCcc
Q 028262 143 ASKGNWLDLQYKEDKL 158 (211)
Q Consensus 143 ~~~~~W~~L~~~e~k~ 158 (211)
+++++|++|...+.++
T Consensus 87 ~~~~~W~~L~~~~~~~ 102 (114)
T 1rl1_A 87 PEAVRWEKLEGQGDVP 102 (114)
T ss_dssp SSCCCCSSSBTTC---
T ss_pred CCCCcCccccccCCcc
Confidence 9989999999766543
No 5
>1ejf_A Progesterone receptor P23; chaperone, CO-chaperone, beta-sandwich; 2.49A {Homo sapiens} SCOP: b.15.1.2
Probab=99.85 E-value=2.5e-21 Score=149.93 Aligned_cols=96 Identities=19% Similarity=0.241 Sum_probs=85.5
Q ss_pred ceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEe-CCCceeEEecCCcCCCccCCCceEEEeCCeEEEEEeecC
Q 028262 66 SFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD-VQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKAS 144 (211)
Q Consensus 66 ~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~-~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~~ 144 (211)
+|.|+||.+.|+|+|+++++ +++.|+|++++|+|.+.+ .+|++|.+.+ +||++|+|++|+|++.+++|+|+|+|++
T Consensus 5 ~~~W~Qt~~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~~~y~~~l-~L~~~I~~e~S~~~v~~~kiei~L~K~~ 81 (125)
T 1ejf_A 5 SAKWYDRRDYVFIEFCVEDS--KDVNVNFEKSKLTFSCLGGSDNFKHLNEI-DLFHCIDPNDSKHKRTDRSILCCLRKGE 81 (125)
T ss_dssp CEEEEECSSEEEEEECCTTE--EEEEEEEETTEEEEEEEETTTTEEEEEEE-EBSSCEEEEEEEEEECSSCEEEEEEESS
T ss_pred ceeEEeCCCEEEEEEEecCC--CceEEEEECCEEEEEEEeCCCCceEEEEE-EccceeccccCEEEECCCEEEEEEEECC
Confidence 79999999999999999985 799999999999999875 6788899998 9999999999999999999999999998
Q ss_pred CC-CcccccccCCcc---CCCCCC
Q 028262 145 KG-NWLDLQYKEDKL---KPNLDK 164 (211)
Q Consensus 145 ~~-~W~~L~~~e~k~---kp~~d~ 164 (211)
++ +|++|+..+.+. +++||+
T Consensus 82 ~~~~W~rL~~~~~K~~~lk~D~dk 105 (125)
T 1ejf_A 82 SGQSWPRLTKERAKLNWLSVDFNN 105 (125)
T ss_dssp TTCCCSSSBSSCCCCTTEEECTTT
T ss_pred CCCCCCceecCCCccccccCChHH
Confidence 75 999999766542 456665
No 6
>1wh0_A Ubiquitin carboxyl-terminal hydrolase 19; USP, CS domain, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Homo sapiens} SCOP: b.15.1.3
Probab=99.85 E-value=3.8e-21 Score=150.96 Aligned_cols=93 Identities=18% Similarity=0.349 Sum_probs=84.8
Q ss_pred eeccceeEeec-CCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCCc------------eeEEecCCcCCCccCCCce
Q 028262 62 ITLGSFSWDQD-NEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQGK------------NYRFTSPRLNQEIVPEKSK 128 (211)
Q Consensus 62 ~~i~~y~W~Qt-~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~gk------------~y~l~i~~L~~~I~pe~S~ 128 (211)
...++|+|+|+ .+.|+|+|+++++.++++.|+|++++|+|.+...++. .|.+.+ +||++|+|++|+
T Consensus 17 ~~~~r~~W~Qt~~~~V~vtI~~k~v~~~~v~V~f~~~~l~v~~~~~~~~~l~~~~a~g~~~~y~~~~-~L~~~I~pe~S~ 95 (134)
T 1wh0_A 17 LAFVKNDSYEKGPDSVVVHVYVKEICRDTSRVLFREQDFTLIFQTRDGNFLRLHPGCGPHTTFRWQV-KLRNLIEPEQCT 95 (134)
T ss_dssp ESCCCEEEEEETTTEEEEEEECCSBCTTSCEEEECSSEEEEEECBCCHHHHHHSTTCCTTSCEEEEE-EBSSCEEEEEEE
T ss_pred ccCCCeEEEcCCCCEEEEEEEeCCCCcccCEEEEECCEEEEEEEcCCCcccccccccCcceeEEEec-cccccCCchhCE
Confidence 34589999999 9999999999999999999999999999999765555 799987 799999999999
Q ss_pred EEEeCCeEEEEEeecCCCCcccccccC
Q 028262 129 VLVKPTRVVIMLFKASKGNWLDLQYKE 155 (211)
Q Consensus 129 ~kv~~~kIeI~L~K~~~~~W~~L~~~e 155 (211)
|++.+++|+|+|+|++..+|++|+...
T Consensus 96 ~~v~~~kIeI~L~K~e~~~W~~L~~~~ 122 (134)
T 1wh0_A 96 FCFTASRIDICLRKRQSQRWGGLEAPA 122 (134)
T ss_dssp EEECSSEEEEEEEESSSCCCSCSBCCC
T ss_pred EEEeCCEEEEEEEECCCCccccccccC
Confidence 999999999999999888999999654
No 7
>2kmw_A Uncharacterized protein AT3G03773; protein structure initiative, center for eukaryotic structural genomics, CESG, structural genomics; NMR {Arabidopsis thaliana}
Probab=99.84 E-value=3.3e-21 Score=153.94 Aligned_cols=96 Identities=22% Similarity=0.367 Sum_probs=85.4
Q ss_pred cceeEeecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCeEEEEEeec
Q 028262 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTRVVIMLFKA 143 (211)
Q Consensus 65 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~-~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~L~K~ 143 (211)
++|.|+||.+.|+|+|+++++ +++.|+|+ +++|+|.+.+.+|++|.|.+ +||++|+|+ |+|++.+++|+|+|+|+
T Consensus 5 P~~~W~Qt~~~V~ltI~l~~~--~~v~V~~~~~~~l~~~~~~~~~~~y~~~l-~L~~~Idpe-S~~~v~~~kIei~L~K~ 80 (150)
T 2kmw_A 5 PEVLWAQRSDKVYLTVALPDA--KDISVKCEPQGLFSFSALGAQGERFEFSL-ELYGKIMTE-YRKNVGLRNIIFSIQKE 80 (150)
T ss_dssp CCEEEEECSSEEEEEECCSSE--EEEEECCCTTEEEEEEEETTTTEEEEEEE-EBSSCEEEE-EEEEEESSSEEEEEEEC
T ss_pred CcEEEEeCCCEEEEEEEeCCC--CceEEEEecCCEEEEEEEcCCCceEEEEe-Ehhhccccc-ceEEecCCEEEEEEEEC
Confidence 689999999999999999986 58999999 79999999867788999998 999999999 99999999999999999
Q ss_pred CCCCcccccccCCc-c---CCCCCC
Q 028262 144 SKGNWLDLQYKEDK-L---KPNLDK 164 (211)
Q Consensus 144 ~~~~W~~L~~~e~k-~---kp~~d~ 164 (211)
++++|++|++.+.+ . +.+||+
T Consensus 81 e~~~W~rL~k~~~K~~~~lk~Dwdk 105 (150)
T 2kmw_A 81 ERSWWTRLLKSEEKPAPYIKVDWNK 105 (150)
T ss_dssp CSSCCSCSBSCCSSCCTTEEECSSS
T ss_pred CCCcCcccccCCcccCccccccchh
Confidence 98999999976544 2 336654
No 8
>1wgv_A KIAA1068 protein; CS domain, HSP20-like fold, structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; NMR {Homo sapiens} SCOP: b.15.1.4
Probab=99.82 E-value=8.5e-20 Score=141.06 Aligned_cols=95 Identities=18% Similarity=0.327 Sum_probs=83.9
Q ss_pred eccceeEeecCCEEEEEEEeC-CC-CCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCe-EEEE
Q 028262 63 TLGSFSWDQDNEKVKIYISLE-GV-VQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVIM 139 (211)
Q Consensus 63 ~i~~y~W~Qt~~~V~I~I~lk-~v-~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI~ 139 (211)
..++|.|+||.+.|+|+|+++ ++ +++++.|+|++++|+|.+.+..|..|.+. ++||++|+|++|+|++.+++ |+|+
T Consensus 18 ~~~~y~W~Qt~~~V~i~I~lp~~~~~~kdv~V~i~~~~l~v~~~~~~~~~~~~~-~~L~~~I~~e~S~w~i~~~k~v~i~ 96 (124)
T 1wgv_A 18 VRENYTWSQDYTDLEVRVPVPKHVVKGKQVSVALSSSSIRVAMLEENGERVLME-GKLTHKINTESSLWSLEPGKCVLVN 96 (124)
T ss_dssp CCSSCEEEEETTEEEEEEECCTTCCSGGGEEEEECSSEEEEEEECSSSEEEEEE-EEBSSCBCTTTCEEEECTTSEEEEE
T ss_pred cCCcEEEEEcccEEEEEEEcCCCCCchhheEEEEEcCEEEEEEEccCCCceEEc-ccccCcCCCcCCEEEEeCCCEEEEE
Confidence 457999999999999999998 77 88999999999999999976556667666 49999999999999999987 9999
Q ss_pred EeecCCCCcccccccCCcc
Q 028262 140 LFKASKGNWLDLQYKEDKL 158 (211)
Q Consensus 140 L~K~~~~~W~~L~~~e~k~ 158 (211)
|.|++.++|++|...+.++
T Consensus 97 L~K~~~~~W~~L~~~~~~i 115 (124)
T 1wgv_A 97 LSKVGEYWWNAILEGEEPI 115 (124)
T ss_dssp ECBSSSCCCSCSBTTSCCC
T ss_pred EEECCCCCCcCcccCCCcc
Confidence 9999888999999766443
No 9
>1wfi_A Nuclear distribution gene C homolog; NUDC, riken structural genomics/proteomics initiative, RSGI, structural genomics, transport protein; NMR {Mus musculus} SCOP: b.15.1.4
Probab=99.81 E-value=1.6e-20 Score=146.39 Aligned_cols=117 Identities=17% Similarity=0.257 Sum_probs=92.8
Q ss_pred ccceeEeecCCEEEEEEEeC-C--CCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCC-eEEEE
Q 028262 64 LGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVVIM 139 (211)
Q Consensus 64 i~~y~W~Qt~~~V~I~I~lk-~--v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIeI~ 139 (211)
.++|.|+||.+.|+|+|+++ + ++++++.|+|++++|+|.++ |..+.+ .++||++|+|++|+|++.++ .|+|+
T Consensus 7 ~~~y~W~Qt~~~V~i~I~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~-~~~L~~~I~~e~s~w~i~~~k~v~i~ 82 (131)
T 1wfi_A 7 GPNYRWTQTLAELDLAVPFRVSFRLKGKDVVVDIQRRHLRVGLK---GQPPVV-DGELYNEVKVEESSWLIEDGKVVTVH 82 (131)
T ss_dssp CCSSEEEECSSEEEEEECCCCSSCCCTTSEEEEEETTEEEEEET---TSCCSB-CSCBSSCBCSTTCEEEEETTTEEEEE
T ss_pred CCcEEEEecCCEEEEEEECCCCCcccccceEEEEeCCEEEEEEC---CceEEE-ecccccccccccCEEEEcCCCEEEEE
Confidence 46899999999999999998 5 78999999999999999985 444545 46999999999999999998 69999
Q ss_pred EeecCCC-CcccccccCCccCCCCCCCCCCc-hhHHHHHHHHhcCCCHHHHHHHHHHH
Q 028262 140 LFKASKG-NWLDLQYKEDKLKPNLDKERDPM-AGIMDLMKNMYEEGDDEMKRTIAKAW 195 (211)
Q Consensus 140 L~K~~~~-~W~~L~~~e~k~kp~~d~~~dp~-~~l~~l~k~iY~~gDde~kRam~Ks~ 195 (211)
|.|++++ +|++|...+.+ +++.+ -+|+ .. .++.|+|+|-++.|+|
T Consensus 83 L~K~~~~~~W~~L~~~~~~--id~~k-i~pe~~~--------~~dld~e~r~~vekmm 129 (131)
T 1wfi_A 83 LEKINKMEWWNRLVTSDPE--INTKK-INPENSK--------LSDLDSETRSMVSGPS 129 (131)
T ss_dssp EEBSSSCCCCSCSBSSCCS--CCCSS-SSCCCCS--------CCCCCCCCCCCCCCCC
T ss_pred EEECCCCCCChhhhcCCCC--CCccE-ecCCCCC--------cccCCHHHHHHHHHHh
Confidence 9999886 99999965543 23332 2332 22 2677888877766654
No 10
>2cg9_X CO-chaperone protein SBA1; chaperone complex, HSP90, heat shock protein, ATP-binding, heat shock, nucleotide-binding, acetylation; HET: ATP; 3.1A {Saccharomyces cerevisiae}
Probab=99.79 E-value=3.4e-20 Score=145.37 Aligned_cols=99 Identities=25% Similarity=0.375 Sum_probs=79.7
Q ss_pred ccceeEeecCCE-------EEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC------CceeEEecCCcCCCccCCCceEE
Q 028262 64 LGSFSWDQDNEK-------VKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ------GKNYRFTSPRLNQEIVPEKSKVL 130 (211)
Q Consensus 64 i~~y~W~Qt~~~-------V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~------gk~y~l~i~~L~~~I~pe~S~~k 130 (211)
.++|.|+|+.+. |+|+|+++++ .++.|+|++++|+|.+.+.+ ++.|.+.+ +||++|+|++|+|+
T Consensus 6 ~p~~~W~Q~~~~~~~~k~~V~ltI~~~~~--~~~~V~~~~~~l~~~~~~~~~~g~~~~~~y~~~l-~L~~~Idpe~S~~~ 82 (134)
T 2cg9_X 6 NPQVAWAQRSSTTDPERNYVLITVSIADC--DAPELTIKPSYIELKAQSKPHVGDENVHHYQLHI-DLYKEIIPEKTMHK 82 (134)
T ss_dssp -----CBCCCEEECCCSSEEEEECCCSSE--ESCCCCBCSSEEEECCEEC-------CEEBCEEE-ECSSCCCSSSEEEE
T ss_pred CCCEEEEeCCCCcCCcCCEEEEEEEecCC--CceEEEEECCEEEEEEecccccCCccCceEEEEE-EChhhccccccEEE
Confidence 468999999977 9999999986 58999999999999986543 47899998 99999999999999
Q ss_pred EeCCe-EEEEEeecC--CCCcccccccCCc---cCCCCCCC
Q 028262 131 VKPTR-VVIMLFKAS--KGNWLDLQYKEDK---LKPNLDKE 165 (211)
Q Consensus 131 v~~~k-IeI~L~K~~--~~~W~~L~~~e~k---~kp~~d~~ 165 (211)
+.+++ |+|+|+|++ ..+|++|+..+.+ .+++||+.
T Consensus 83 v~~~~~vei~L~K~~~~~~~W~rL~k~~~K~~~lk~D~dkw 123 (134)
T 2cg9_X 83 VANGQHYFLKLYKKDLESEYWPRLTKEKVKYPYIKTDFDKW 123 (134)
T ss_dssp ECCC--CEEEEEECSSSSCCCSCSSSSCCCCSSEEECTTTC
T ss_pred ECCCEEEEEEEEECCCCCCCCCceecCCCccCcccCCchhc
Confidence 99999 999999998 3599999976654 25577763
No 11
>2rh0_A NUDC domain-containing protein 2; 13542905, nuclear movement protein, structural genomics, joint center for structural genomics, JCSG; 1.95A {Mus musculus}
Probab=99.74 E-value=8.8e-18 Score=134.97 Aligned_cols=116 Identities=16% Similarity=0.270 Sum_probs=94.7
Q ss_pred eeeccceeEeecCCEEEEEEEeC-CCCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCCe-EEE
Q 028262 61 YITLGSFSWDQDNEKVKIYISLE-GVVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPTR-VVI 138 (211)
Q Consensus 61 ~~~i~~y~W~Qt~~~V~I~I~lk-~v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~k-IeI 138 (211)
....++|.|+||.+.|+|+|.++ ++.+++|.|+|++++|+|.++ |..| +. ++||++|+|++|+|++.+++ |+|
T Consensus 10 ~~~~~~y~W~Qt~~eV~v~I~lp~~~~~kdv~V~i~~~~L~v~~k---g~~~-l~-g~L~~~I~~eeS~w~i~~~k~v~I 84 (157)
T 2rh0_A 10 PCGTPWGQWYQTLEEVFIEVQVPPGTRAQDIQCGLQSRHVALAVG---GREI-LK-GKLFDSTIADEGTWTLEDRKMVRI 84 (157)
T ss_dssp CEECSSEEEEECSSEEEEEEECCTTCCGGGEEEEECSSEEEEEET---TEEE-EE-EEBSSCBCGGGCEEEEECCCEEEE
T ss_pred cCCCCcEEEEecCCEEEEEEECCCCCcccceEEEEecCEEEEEEC---CEEE-Ee-eccccccCccccEEEEcCCcEEEE
Confidence 34678999999999999999997 778899999999999999985 4443 44 59999999999999999987 999
Q ss_pred EEeecCC---CCcccccccCCccCCCCCCCCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhcCC
Q 028262 139 MLFKASK---GNWLDLQYKEDKLKPNLDKERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDARSG 201 (211)
Q Consensus 139 ~L~K~~~---~~W~~L~~~e~k~kp~~d~~~dp~~~l~~l~k~iY~~gDde~kRam~Ks~~ES~~k 201 (211)
+|.|++. .+|++|...+.+ .||.. | |+..||.|.+-|++.+..
T Consensus 85 ~L~K~~~~~~~~W~~L~k~~~~--------lD~~t---------~---d~~~k~~~L~~f~~~~p~ 130 (157)
T 2rh0_A 85 VLTKTKRDAANCWTSLLESEYA--------ADPWV---------Q---DQMQRKLTLERFQKENPG 130 (157)
T ss_dssp EEEBSSCSTTCCCSEEETTEEE--------CCHHH---------H---HHHHHHHHHHHHHHHCTT
T ss_pred EEEEcCCCcCCcChhhhcCCCC--------CChHH---------H---HHHHHHHHHHHHHHHCCC
Confidence 9999986 599999965432 23332 2 345678889999998755
No 12
>3qor_A Nuclear migration protein NUDC; beta-sandwich, chaperone, protein cell cycle; HET: OCS; 1.75A {Homo sapiens} PDB: 3qor_B* 2cr0_A
Probab=99.74 E-value=1.2e-17 Score=128.55 Aligned_cols=91 Identities=19% Similarity=0.288 Sum_probs=79.6
Q ss_pred eeccceeEeecCCEEEEEEEeC-C--CCCCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCCceEEEeCC-eEE
Q 028262 62 ITLGSFSWDQDNEKVKIYISLE-G--VVQDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEKSKVLVKPT-RVV 137 (211)
Q Consensus 62 ~~i~~y~W~Qt~~~V~I~I~lk-~--v~~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~S~~kv~~~-kIe 137 (211)
...++|.|+||.+.|+|+|.++ + ++++++.|+|++++|+|.+. |..|.+. ++||++|+|++|+|++.++ +|+
T Consensus 14 ~~~~~y~W~Qt~~eV~v~V~lp~~~~~~~kdv~V~i~~~~l~v~~k---g~~~~~~-g~L~~~I~~deS~w~i~~~~~i~ 89 (121)
T 3qor_A 14 ADLPNYRWTQTLSELDLAVPFCVNFRLKGKDMVVDIQRRHLRVGLK---GQPAIID-GELYNEVKVEESSWLIADGAVVT 89 (121)
T ss_dssp CBCSSCEEEECSSEEEEEEECCCSSCCCGGGEEEEEETTEEEEEET---TSCCSEE-EEBSSCBCGGGCEEEEETTTEEE
T ss_pred CcCCCEEEEEccceEEEEEECCCCCcccccceEEEEEcCEEEEEEc---CcceEEe-ccccccccccccEEEEcCCCEEE
Confidence 3567899999999999999998 4 78899999999999999885 3456565 5999999999999999986 899
Q ss_pred EEEeecCCC-CcccccccCC
Q 028262 138 IMLFKASKG-NWLDLQYKED 156 (211)
Q Consensus 138 I~L~K~~~~-~W~~L~~~e~ 156 (211)
|+|.|++.+ +|++|...+.
T Consensus 90 i~L~K~~~~~~W~~L~~~~~ 109 (121)
T 3qor_A 90 VHLEKINKMEWWSRLVSSDP 109 (121)
T ss_dssp EEEEBSSSSCCCSCSBTTSC
T ss_pred EEEEECCCCCCChhhhcCCC
Confidence 999999875 9999997664
No 13
>2jtt_C Calcyclin-binding protein; S100A6, SIAH-1 interacting protein, ubiquitination, E3 ligase complex, beta-catenin, calcium, cell cycle, mitogen; NMR {Mus musculus}
Probab=99.71 E-value=2.2e-18 Score=104.55 Aligned_cols=34 Identities=50% Similarity=1.026 Sum_probs=30.4
Q ss_pred CCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHhc
Q 028262 166 RDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDAR 199 (211)
Q Consensus 166 ~dp~~~l~~l~k~iY~~gDde~kRam~Ks~~ES~ 199 (211)
+||+++||+|||+||++|||||||||+|||+||+
T Consensus 2 ~dp~~~l~~~fk~iY~~gddd~kram~KS~~eS~ 35 (35)
T 2jtt_C 2 PGSSEGLMNVLKKIYEDGDDDMKRTINKAWVESR 35 (35)
T ss_dssp ---CCSHHHHHHHHHTTCCSSHHHHHHHHHHTTC
T ss_pred CChhHHHHHHHHHHHhcCCHHHHHHHHHHHhhcC
Confidence 5899999999999999999999999999999996
No 14
>1ysm_A Calcyclin-binding protein; helix-turn-helix, metal binding protein; NMR {Mus musculus} SCOP: a.2.16.1
Probab=99.54 E-value=4.3e-15 Score=105.68 Aligned_cols=40 Identities=33% Similarity=0.392 Sum_probs=38.8
Q ss_pred hhHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhc
Q 028262 2 AEDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 2 ~~~l~~dl~E~~~ll~~a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
++||++||+||++||++|+||||+++|+.+|++||++|..
T Consensus 5 ~eeL~~DLeEl~~Ll~~AkR~rVk~~L~~ei~~lE~ei~~ 44 (77)
T 1ysm_A 5 LEELQKDLEEVKVLLEKSTRKRLRDTLTSEKSKIETELKN 44 (77)
T ss_dssp HHHHHHHHHHHHHHHHHTTTTTHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999985
No 15
>2a26_A Calcyclin-binding protein; helical hairpin, dimerization, apoptosis; HET: CXS; 1.20A {Homo sapiens} SCOP: a.2.16.1
Probab=99.48 E-value=3.3e-14 Score=93.07 Aligned_cols=41 Identities=37% Similarity=0.454 Sum_probs=38.8
Q ss_pred Ch-hHHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhc
Q 028262 1 MA-EDLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 1 ~~-~~l~~dl~E~~~ll~~a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
|+ +||++||+||++|+++|+||||+++|+.+|++||++|..
T Consensus 4 m~~eeL~~DL~El~~Ll~~AkR~rVk~~L~~ei~~lE~ei~~ 45 (50)
T 2a26_A 4 MASEELQKDLEEVKVLLEKATRKRVRDALTAEKSKIETEIKN 45 (50)
T ss_dssp CCHHHHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHhccHHHHHHHHHHHHHHHHHHHH
Confidence 54 999999999999999999999999999999999999875
No 16
>3gla_A Low molecular weight heat shock protein; HSPA, SHP, SHSP, high resolution, stress response, chaperone; 1.64A {Xanthomonas axonopodis PV} PDB: 3gt6_A 3guf_A
Probab=98.27 E-value=1e-05 Score=58.98 Aligned_cols=80 Identities=9% Similarity=0.119 Sum_probs=66.6
Q ss_pred cceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC-----Cc----------eeEEecCCcCCCccCCCceE
Q 028262 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----GK----------NYRFTSPRLNQEIVPEKSKV 129 (211)
Q Consensus 65 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~-----gk----------~y~l~i~~L~~~I~pe~S~~ 129 (211)
+.++|+++++.+.|.+.++|+.++++.|.+..+.|.|...... +. .|.-.+ .|-..|+++..+.
T Consensus 5 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~~~~~~er~~g~f~r~~-~LP~~vd~~~i~A 83 (100)
T 3gla_A 5 PRVDIKEEVNHFVLYADLPGIDPSQIEVQMDKGILSIRGERKSESSTETERFSRIERRYGSFHRRF-ALPDSADADGITA 83 (100)
T ss_dssp CCEEEEECSSEEEEEEECTTSCGGGCEEEEETTEEEEEEEECCGGGSSGGGEEEECCCCEEEEEEE-ECCTTBCTTSCEE
T ss_pred CcEEEEECCCEEEEEEECCCCCHHHEEEEEECCEEEEEEEEcCcCccCCccEEEEeecceEEEEEE-ECCCCcChHHeEE
Confidence 6799999999999999999999999999999999999874311 11 355555 8888999999999
Q ss_pred EEeCCeEEEEEeecCC
Q 028262 130 LVKPTRVVIMLFKASK 145 (211)
Q Consensus 130 kv~~~kIeI~L~K~~~ 145 (211)
+..++.+.|+|.|..+
T Consensus 84 ~~~~GvL~I~~pK~~~ 99 (100)
T 3gla_A 84 AGRNGVLEIRIPKRPA 99 (100)
T ss_dssp EEETTEEEEEEEBC--
T ss_pred EEeCCEEEEEEecCCC
Confidence 9999999999999754
No 17
>4fei_A Heat shock protein-related protein; stress response, alpha-crystallin domain fold, aggregates, C chaperone; 2.40A {Deinococcus radiodurans}
Probab=98.14 E-value=3.4e-05 Score=56.70 Aligned_cols=80 Identities=8% Similarity=0.098 Sum_probs=68.0
Q ss_pred cceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCCC----------ceeEEecCCcCCCccCCCceEEEeCC
Q 028262 65 GSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQG----------KNYRFTSPRLNQEIVPEKSKVLVKPT 134 (211)
Q Consensus 65 ~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~g----------k~y~l~i~~L~~~I~pe~S~~kv~~~ 134 (211)
+.++|+++++.+.|.+.|+|+.++++.|.+..+.|.|....... ..|.-.+ .|-..|+++..+.+..++
T Consensus 7 P~~di~e~~~~~~v~~~lPG~~~edi~v~~~~~~L~I~g~~~~~~~~~~~er~~g~f~R~~-~LP~~vd~~~i~A~~~~G 85 (102)
T 4fei_A 7 PAADWRDAGTHLDLLLDVPGVDAGTLALAEDGGQLTVSGERPGTEHLLRSERPSGRFVREL-AFPEPVRPASGVASLAGG 85 (102)
T ss_dssp CCEEEEEETTEEEEEEECTTCCGGGCEEEEETTEEEEEEEECCCSSCSSCCSEEEEEEEEE-ECSSCBCTTCCEEEEETT
T ss_pred CcEEEEEcCCEEEEEEECCCCchHhEEEEEECCEEEEEEEEecCCCEEEEEEeccEEEEEE-ECCCCcchhHcEEEEECC
Confidence 67999999999999999999999999999999999998743111 1355555 788999999999999999
Q ss_pred eEEEEEeecCC
Q 028262 135 RVVIMLFKASK 145 (211)
Q Consensus 135 kIeI~L~K~~~ 145 (211)
.+.|+|.|..+
T Consensus 86 vL~I~lpK~~~ 96 (102)
T 4fei_A 86 VLTVRFEKLRP 96 (102)
T ss_dssp EEEEEEEBSSC
T ss_pred EEEEEEEccCc
Confidence 99999999764
No 18
>2k8q_A Protein SHQ1; beta-sandwich, CS domain, nucleus, structural protein; NMR {Saccharomyces cerevisiae}
Probab=98.06 E-value=6.5e-06 Score=64.02 Aligned_cols=83 Identities=20% Similarity=0.216 Sum_probs=71.0
Q ss_pred ccceeEeecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCc-cCCCc--eEEEeCCeEEE
Q 028262 64 LGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEI-VPEKS--KVLVKPTRVVI 138 (211)
Q Consensus 64 i~~y~W~Qt~~~V~I~I~lk~v~--~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I-~pe~S--~~kv~~~kIeI 138 (211)
.++|.=.|++++|.|.|.++.+. ..++.+.+.++-|.|+. +.|.|.+ .|-++| +++.| +|....+.+.|
T Consensus 3 TP~F~itQd~e~viV~Ik~P~~~~~~sdiei~v~~~~F~F~~-----~PYyLRL-~LP~~V~e~~~~kA~YD~d~~~~~V 76 (134)
T 2k8q_A 3 TPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRL-RFPHELIDDERSTAQYDSKDECINV 76 (134)
T ss_dssp CSEEEEEECSSEEEEEEECCSSCCCSSSCCCEECSSSEEECS-----SSSCEEE-CCSSCEECCSSCEEEEETTTTEEEE
T ss_pred CceEEEEECCCEEEEEEEcCccccCccccEEEEeCCEEEEec-----CCeEEEe-cCCCeeecCCCcceeEeccCCEEEE
Confidence 46889999999999999999987 88999999999998886 4688888 999999 55544 55555679999
Q ss_pred EEeecCCC-Cccccc
Q 028262 139 MLFKASKG-NWLDLQ 152 (211)
Q Consensus 139 ~L~K~~~~-~W~~L~ 152 (211)
+|.|...| +|+.|-
T Consensus 77 tLpK~~~Ge~F~dLD 91 (134)
T 2k8q_A 77 KVAKLNKNEYFEDLD 91 (134)
T ss_dssp EEEESSTTCCCSSTT
T ss_pred EEeCCCCCCCCCCcc
Confidence 99999988 899985
No 19
>3aab_A Putative uncharacterized protein ST1653; alpha-crystallin domain, chaperone; 1.85A {Sulfolobus tokodaii} PDB: 3aac_A
Probab=98.04 E-value=3.5e-05 Score=58.45 Aligned_cols=81 Identities=12% Similarity=0.096 Sum_probs=68.7
Q ss_pred ccceeEeecCCEEEEEEEeCCCCCCCcEEEEEe-eEEEEEEEeCC---Cc--------eeEEecCCcCCCccCCCc-eEE
Q 028262 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQ-WSFDVKFHDVQ---GK--------NYRFTSPRLNQEIVPEKS-KVL 130 (211)
Q Consensus 64 i~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~-~sl~v~i~~~~---gk--------~y~l~i~~L~~~I~pe~S-~~k 130 (211)
.+.++|+++++.+.|.+.++|+.++++.|.+.+ +.|.|...... +. .|.-.+ .|-..|+++.. +.+
T Consensus 24 ~P~~di~e~~~~~~v~~~lPG~~~edi~V~v~~~~~L~I~g~~~~~~~~~~~~~Er~~~f~R~~-~LP~~vd~~~i~~A~ 102 (123)
T 3aab_A 24 YPPVDMYEEGGYLVVVADLAGFNKEKIKARVSGQNELIIEAEREITEPGVKYLTQRPKYVRKVI-RLPYNVAKDAEISGK 102 (123)
T ss_dssp CSCEEEEEETTEEEEEEECCSCCGGGCEEEEETTTEEEEEEECCCCCCSCEEEECSCSEEEEEE-ECSSEECTTCCCEEE
T ss_pred CCcEEEEEcCCEEEEEEECCCCCHHHEEEEEeCCCEEEEEEEEeccCCCeEEEEEEeEEEEEEE-ECCCCcCcchhCeeE
Confidence 478999999999999999999999999999999 99999885321 11 455555 88889999988 888
Q ss_pred EeCCeEEEEEeecCC
Q 028262 131 VKPTRVVIMLFKASK 145 (211)
Q Consensus 131 v~~~kIeI~L~K~~~ 145 (211)
..++.+.|+|.|..+
T Consensus 103 ~~~GvL~I~lPK~~~ 117 (123)
T 3aab_A 103 YENGVLTIRIPIAGT 117 (123)
T ss_dssp EETTEEEEEEEGGGE
T ss_pred EcCCEEEEEEEcCCC
Confidence 999999999999764
No 20
>3eud_A Protein SHQ1; CS domain HSP20-like domain SHQ1 H/ACA snoRNP ribosome biogenesis, nucleus, nuclear protein; HET: MSE; 2.40A {Saccharomyces cerevisiae}
Probab=97.90 E-value=0.00011 Score=55.51 Aligned_cols=84 Identities=18% Similarity=0.221 Sum_probs=70.6
Q ss_pred eccceeEeecCCEEEEEEEeCCCC--CCCcEEEEEeeEEEEEEEeCCCceeEEecCCcCCCccCCC---ceEEEeCCeEE
Q 028262 63 TLGSFSWDQDNEKVKIYISLEGVV--QDKMEAEFKQWSFDVKFHDVQGKNYRFTSPRLNQEIVPEK---SKVLVKPTRVV 137 (211)
Q Consensus 63 ~i~~y~W~Qt~~~V~I~I~lk~v~--~e~v~V~f~~~sl~v~i~~~~gk~y~l~i~~L~~~I~pe~---S~~kv~~~kIe 137 (211)
-.++|.=.|++++|.|.|.++.+. ..++.+.+.++-|.+.+ +.|-|.+ .|-++|.-++ ++|....+.+.
T Consensus 16 iTP~F~itQDdefv~I~I~~p~ir~~a~~~ei~vd~~~F~F~~-----~PYyLRL-~lP~~vved~~~~A~YD~d~g~~~ 89 (115)
T 3eud_A 16 ITPRFSITQDEEFIFLKIFISNIRFSAVGLEIIIQENMIIFHL-----SPYYLRL-RFPHELIDDERSTAQYDSKDECIN 89 (115)
T ss_dssp BCCCEEEEECSSEEEEEEECCSCCCCSSSCEEEEETTEEEEEE-----TTEEEEE-ECSSCEECSTTCEEEEETTTTEEE
T ss_pred eCCcEEEEECCCEEEEEEEcCceecccCccEEEEeCCEEEEec-----CCeEEEE-ecCcceecCCCcceEEeCCCcEEE
Confidence 357899999999999999999775 77999999999999998 4688887 9999995433 37777788999
Q ss_pred EEEeecCCC-Cccccc
Q 028262 138 IMLFKASKG-NWLDLQ 152 (211)
Q Consensus 138 I~L~K~~~~-~W~~L~ 152 (211)
|+|.|..+| ..+.|-
T Consensus 90 v~lpK~~~GE~F~dLD 105 (115)
T 3eud_A 90 VKVAKLNKNEYFEDLD 105 (115)
T ss_dssp EEEEESSTTCCCCCTT
T ss_pred EEEcCCcCCCcCCCcc
Confidence 999999987 777663
No 21
>4eld_A MJ16.5-P1, small heat shock protein HSP16.5; chaperone; 2.70A {Methanocaldococcus jannaschii} PDB: 1shs_A
Probab=97.80 E-value=0.0002 Score=56.77 Aligned_cols=81 Identities=14% Similarity=0.162 Sum_probs=67.3
Q ss_pred ccceeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC-----C-----------ceeEEecCCcCCCccCCCc
Q 028262 64 LGSFSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ-----G-----------KNYRFTSPRLNQEIVPEKS 127 (211)
Q Consensus 64 i~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~-----g-----------k~y~l~i~~L~~~I~pe~S 127 (211)
...++++++++.+.|.+.|+|+.+++|.|.+.++.|.|...... + ..|.-.+ .|-..|+++..
T Consensus 56 ~~pvdi~e~~~~~~v~~dlPG~~~edi~V~~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~~g~f~R~~-~LP~~vd~~~i 134 (161)
T 4eld_A 56 FMPISIIEGDQHIKVIAWLPGVNKEDIILNAVGDTLEIRAKRSPLMITESERIIYSEIPEEEEIYRTI-KLPATVKEENA 134 (161)
T ss_dssp CCCEEEEECSSEEEEEEECTTCCGGGEEEEEETTEEEEEEECCCCCCCSSCEEEEECSCCCCEEEEEE-ECSSCBCGGGC
T ss_pred ccceeEEEeCCEEEEEEECCCCChHhEEEEEECCEEEEEEEEcccccCCCceEEEEEeeccccEEEEE-ECCCCcccccE
Confidence 34499999999999999999999999999999999999874321 1 1344445 78889999998
Q ss_pred eEEEeCCeEEEEEeecCC
Q 028262 128 KVLVKPTRVVIMLFKASK 145 (211)
Q Consensus 128 ~~kv~~~kIeI~L~K~~~ 145 (211)
+.+..++.++|+|.|...
T Consensus 135 ~A~~~nGvL~I~lpK~~~ 152 (161)
T 4eld_A 135 SAKFENGVLSVILPKAES 152 (161)
T ss_dssp EEEEETTEEEEEEEBCGG
T ss_pred EEEEECCEEEEEEEcCCC
Confidence 999999999999999764
No 22
>1gme_A Heat shock protein 16.9B; small heat shock protein, chaperone, alpha-crystallin; 2.70A {Triticum aestivum} SCOP: b.15.1.1 PDB: 2h50_A 2h53_A 2byu_A
Probab=97.70 E-value=0.00022 Score=56.04 Aligned_cols=82 Identities=16% Similarity=0.176 Sum_probs=67.3
Q ss_pred eccceeEeecCCEEEEEEEeCCCCCCCcEEEEE-eeEEEEEEEeC-----CC----------ceeEEecCCcCCCccCCC
Q 028262 63 TLGSFSWDQDNEKVKIYISLEGVVQDKMEAEFK-QWSFDVKFHDV-----QG----------KNYRFTSPRLNQEIVPEK 126 (211)
Q Consensus 63 ~i~~y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~-~~sl~v~i~~~-----~g----------k~y~l~i~~L~~~I~pe~ 126 (211)
..+.++|+++++.+.|.+.|+|+.+++|.|.+. .+.|.|..... .+ ..|.-.+ .|-..|+++.
T Consensus 42 ~~p~~di~e~~d~~~v~~dlPGv~kedI~V~v~~~~~L~I~g~~~~~~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~ 120 (151)
T 1gme_A 42 ANARMDWKETPEAHVFKADLPGVKKEEVKVEVEDGNVLVVSGERTKEKEDKNDKWHRVERSSGKFVRRF-RLLEDAKVEE 120 (151)
T ss_dssp GGGCEEEEECSSEEEEEEECTTCCGGGEEEEEETTTEEEEEECCCCCCCCTTCEEEECCCCCCCEEEEE-ECSSCCCGGG
T ss_pred cCCceEEEEcCCEEEEEEECCCCChHHEEEEEecCCEEEEEEEEccccccCCceEEEEeEeccEEEEEE-ECCCCccccc
Confidence 357899999999999999999999999999995 57999987321 11 1344455 7888999998
Q ss_pred ceEEEeCCeEEEEEeecCC
Q 028262 127 SKVLVKPTRVVIMLFKASK 145 (211)
Q Consensus 127 S~~kv~~~kIeI~L~K~~~ 145 (211)
.+.+..++.+.|+|.|...
T Consensus 121 i~A~~~nGvL~I~lPK~~~ 139 (151)
T 1gme_A 121 VKAGLENGVLTVTVPKAEV 139 (151)
T ss_dssp CEEEEETTEEEEEEECCCC
T ss_pred eEEEEECCEEEEEEEccCc
Confidence 8899999999999999764
No 23
>2wj5_A Heat shock protein beta-6; chaperone, disulfide bond, stress response; 1.12A {Rattus norvegicus}
Probab=97.65 E-value=0.00019 Score=52.61 Aligned_cols=78 Identities=10% Similarity=0.100 Sum_probs=65.2
Q ss_pred eeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEEecCCcCCCccCCCceEEE-eCCeEE
Q 028262 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (211)
Q Consensus 67 y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (211)
.+|+++++.+.|.+.++|+.++++.|.+.++.|.|..... ++ ..|.-.+ .|-..|+++.-+-++ .++.+.
T Consensus 4 vdi~e~~~~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~nGvL~ 82 (101)
T 2wj5_A 4 AQVPTDPGYFSVLLDVKHFSPEEISVKVVGDHVEVHARHEERPDEHGFIAREFHRRY-RLPPGVDPAAVTSALSPEGVLS 82 (101)
T ss_dssp CCCCCCSSCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEECSSTTCCEEEEEEEEE-ECCTTBCTTCCEEEECTTSEEE
T ss_pred EEEEEeCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHCEEEECCCCEEE
Confidence 6789999999999999999999999999999999987421 11 2255555 888999999999999 689999
Q ss_pred EEEeecCC
Q 028262 138 IMLFKASK 145 (211)
Q Consensus 138 I~L~K~~~ 145 (211)
|+|.|...
T Consensus 83 I~lPK~~~ 90 (101)
T 2wj5_A 83 IQATPASA 90 (101)
T ss_dssp EEECBCCC
T ss_pred EEEECCCc
Confidence 99999754
No 24
>3l1e_A Alpha-crystallin A chain; lens transparency, polydispersity, protein aggregation, CRYS eye lens protein, chaperone; 1.15A {Bos taurus} PDB: 3l1f_A 3n3e_A
Probab=97.51 E-value=0.00064 Score=50.28 Aligned_cols=78 Identities=8% Similarity=0.104 Sum_probs=65.1
Q ss_pred eeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEe---CCC-----ceeEEecCCcCCCccCCCceEEE-eCCeEE
Q 028262 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHD---VQG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (211)
Q Consensus 67 y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~---~~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (211)
-+++++++.+.|.+.++|+.++++.|.+..+.|.|.... .++ ..|.-.+ .|-..|+++.-+..+ .++.+.
T Consensus 5 ~~i~e~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~eF~R~~-~LP~~vd~~~i~A~~s~~GvL~ 83 (106)
T 3l1e_A 5 SEVRSDRDKFVIFLDVKHFSPEDLTVKVQEDFVEIHGKHNERQDDHGYISREFHRRY-RLPSNVDQSALSCSLSADGMLT 83 (106)
T ss_dssp EEEEECSSEEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEETTTEEEEEEEEEEE-ECCTTBCTTSCEEEECTTSEEE
T ss_pred eEEEEcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEE
Confidence 467899999999999999999999999999999998732 112 2355555 888999999999999 789999
Q ss_pred EEEeecCC
Q 028262 138 IMLFKASK 145 (211)
Q Consensus 138 I~L~K~~~ 145 (211)
|+|.|..+
T Consensus 84 I~~PK~~~ 91 (106)
T 3l1e_A 84 FSGPKIPS 91 (106)
T ss_dssp EEEEBCCC
T ss_pred EEEEccCc
Confidence 99999764
No 25
>3q9p_A Heat shock protein beta-1; alpha-crystallin domain, chaperone, charcot-marie-tooth DISE neuronopathy, IG-like fold, stress response; 2.00A {Homo sapiens} PDB: 3q9q_A
Probab=97.37 E-value=0.0015 Score=46.27 Aligned_cols=73 Identities=7% Similarity=0.157 Sum_probs=60.7
Q ss_pred eecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC-----CC---ceeEEecCCcCCCccCCCceEEEe-CCeEEEEE
Q 028262 70 DQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV-----QG---KNYRFTSPRLNQEIVPEKSKVLVK-PTRVVIML 140 (211)
Q Consensus 70 ~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~-----~g---k~y~l~i~~L~~~I~pe~S~~kv~-~~kIeI~L 140 (211)
.++++.+.|.+.++|+.++++.|.+..+.|.|..... .| ..|.-.+ .|-..|+++.-+-+.. ++.+.|+|
T Consensus 3 ~E~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~~F~R~~-~LP~~vd~~~i~A~~~~~GvL~I~l 81 (85)
T 3q9p_A 3 SHTADRWRVSLDVNHFAPDELTVKTKDGVVEITGKHAARQDEHGYISRCFTRKY-TLPPGVDPTQVSSSLSPEGTLTVEA 81 (85)
T ss_dssp CCCCCEEEEEEECTTTCCSEEEEEEETTEEEEEEEEC-------CCCEEEEEEE-ECCTTCCGGGCEEEECTTSEEEEEE
T ss_pred cCcCCEEEEEEECCCCChHHEEEEEECCEEEEEEEEccccCCCCEEEEEEEEEE-ECCCCcChHHcEEEECCCCEEEEEE
Confidence 4678899999999999999999999999999987421 11 3465556 8889999999999998 88999999
Q ss_pred eec
Q 028262 141 FKA 143 (211)
Q Consensus 141 ~K~ 143 (211)
-|.
T Consensus 82 PK~ 84 (85)
T 3q9p_A 82 PMP 84 (85)
T ss_dssp ECC
T ss_pred EcC
Confidence 885
No 26
>2y1y_A Alpha-crystallin B chain,; small heat shock protein, chaperone, stress protein, eye LEN protein, cataract; HET: MSE; 2.00A {Homo sapiens} PDB: 2y22_A 2wj7_A 3l1g_A 2y1z_A
Probab=97.18 E-value=0.001 Score=47.62 Aligned_cols=74 Identities=4% Similarity=0.102 Sum_probs=57.2
Q ss_pred ecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEEecCCcCCCccCCCceEEE-eCCeEEEEEe
Q 028262 71 QDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVVIMLF 141 (211)
Q Consensus 71 Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIeI~L~ 141 (211)
++++.+.|.+.++|+.++++.|.+.++.|.|..... ++ .+|.-.+ .|-..|+++.-+.++ ..+.+.|+|.
T Consensus 3 ~~~~~~~v~~dlPG~~~edi~V~v~~~~L~I~g~~~~~~~~~~~~~~ef~R~~-~LP~~vd~~~i~A~~~~~GvL~I~~p 81 (90)
T 2y1y_A 3 MEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSMSSDGVLTVNGP 81 (90)
T ss_dssp ---CCEEEEEECTTSCGGGEEEEEETTEEEEEEEEEEEECSSSEEEEEEEEEE-ECCTTBCGGGCEEEECTTSEEEEEEC
T ss_pred cCCCEEEEEEECCCCcHHHeEEEEECCEEEEEEEEecccCCCCEEEEEEEEEE-ECCCCcChhHcEEEECCCCEEEEEEE
Confidence 356788999999999999999999999999987421 11 2355555 788999999989999 7899999999
Q ss_pred ecCC
Q 028262 142 KASK 145 (211)
Q Consensus 142 K~~~ 145 (211)
|...
T Consensus 82 K~~~ 85 (90)
T 2y1y_A 82 RKQV 85 (90)
T ss_dssp BC--
T ss_pred cCCC
Confidence 8753
No 27
>2klr_A Alpha-crystallin B chain; protein, dimer, oligomer, heterogeneity, intermolecular INTE chaperone, SHSP, human, small heat-shock protein, cataract; NMR {Homo sapiens} PDB: 2ygd_A
Probab=96.85 E-value=0.0028 Score=51.12 Aligned_cols=78 Identities=4% Similarity=0.079 Sum_probs=61.6
Q ss_pred eeEeecCCEEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeC---CC-----ceeEEecCCcCCCccCCCceEEE-eCCeEE
Q 028262 67 FSWDQDNEKVKIYISLEGVVQDKMEAEFKQWSFDVKFHDV---QG-----KNYRFTSPRLNQEIVPEKSKVLV-KPTRVV 137 (211)
Q Consensus 67 y~W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~---~g-----k~y~l~i~~L~~~I~pe~S~~kv-~~~kIe 137 (211)
.+++++++.+.|.+.|+|+.+++|.|.+.++.|.|..... ++ .+|.-.+ .|-..|+++.-+-+. .++.+.
T Consensus 66 ~dv~e~~d~~~v~~dlPG~~~edI~V~v~~~~L~I~g~~~~~~~~~~~~~reF~R~~-~LP~~Vd~~~i~A~~s~dGvL~ 144 (175)
T 2klr_A 66 SEMRLEKDRFSVNLDVKHFSPEELKVKVLGDVIEVHGKHEERQDEHGFISREFHRKY-RIPADVDPLTITSSLSSDGVLT 144 (175)
T ss_dssp ---CCCCSEEEEEECCSSCCGGGEEEEEETTEEEEEEEEEEEEETTEEEEEEEEEEE-ECTTTCCTTTCEEEECTTSCEE
T ss_pred eEEEEcCCeEEEEEECCCCChHHEEEEEECCEEEEEEEEcccccCCceEEEEEEEEE-ECCCCcChhHeEEEEcCCCEEE
Confidence 5889999999999999999999999999999999887421 11 1245555 788999999999999 689999
Q ss_pred EEEeecCC
Q 028262 138 IMLFKASK 145 (211)
Q Consensus 138 I~L~K~~~ 145 (211)
|+|.|...
T Consensus 145 I~lPK~~~ 152 (175)
T 2klr_A 145 VNGPRKQV 152 (175)
T ss_dssp EEEECC--
T ss_pred EEEECCCC
Confidence 99999754
No 28
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=96.53 E-value=0.012 Score=51.61 Aligned_cols=81 Identities=7% Similarity=0.029 Sum_probs=67.2
Q ss_pred cceeEeecCC----EEEEEEEeCCCCCCCcEEEEEeeEEEEEEEeCC----C---ceeEEecCCcCCCccCCCceEEEe-
Q 028262 65 GSFSWDQDNE----KVKIYISLEGVVQDKMEAEFKQWSFDVKFHDVQ----G---KNYRFTSPRLNQEIVPEKSKVLVK- 132 (211)
Q Consensus 65 ~~y~W~Qt~~----~V~I~I~lk~v~~e~v~V~f~~~sl~v~i~~~~----g---k~y~l~i~~L~~~I~pe~S~~kv~- 132 (211)
+..+.+.+++ .+.|.+.++|+.+++|.|.+..+.|.|...... + ..|.-.+ .|-..|+++.-+-++.
T Consensus 99 p~vDi~E~~~dgk~~~~v~~dlPG~~~edI~V~v~~~~L~I~ge~~~~~e~~r~~g~F~R~~-~LP~~Vd~e~i~A~~~~ 177 (314)
T 2bol_A 99 FLKDAYEVGKDGRLHFKVYFNVKNFKAEEITIKADKNKLVVRAQKSVACGDAAMSESVGRSI-PLPPSVDRNHIQATITT 177 (314)
T ss_dssp GGGGCEEECTTSSEEEEEEEECTTCCTTTEEEEEETTEEEEEECCBSSTTCCCBCCCEEEEE-ECCTTBCGGGCEEEECS
T ss_pred CccceEEcCCCCceEEEEEEECCCCchHHeEEEEECCEEEEEEEEeccCCCCEEEEEEEEEE-ECCCCccccccEEEEeC
Confidence 5677788888 899999999999999999999999999884211 1 2466656 8889999999999999
Q ss_pred CCeEEEEEeecCCC
Q 028262 133 PTRVVIMLFKASKG 146 (211)
Q Consensus 133 ~~kIeI~L~K~~~~ 146 (211)
.+.+.|+|.|..+.
T Consensus 178 nGVL~I~lPK~~~~ 191 (314)
T 2bol_A 178 DDVLVIEAPVNEPN 191 (314)
T ss_dssp SSEEEEEEEBSSCC
T ss_pred CCEEEEEEeccCcc
Confidence 88999999997653
No 29
>2bol_A TSP36, small heat shock protein; A-crystallin, molecular chaperone; 2.5A {Taenia saginata}
Probab=91.70 E-value=0.54 Score=41.02 Aligned_cols=71 Identities=7% Similarity=-0.022 Sum_probs=56.0
Q ss_pred cCCEEEEEEEe-CCCCCCCcEEEEEeeEEEEEEEeC-C--C--------ceeEEecCCcCCCccCCCceEEEeCCeEEEE
Q 028262 72 DNEKVKIYISL-EGVVQDKMEAEFKQWSFDVKFHDV-Q--G--------KNYRFTSPRLNQEIVPEKSKVLVKPTRVVIM 139 (211)
Q Consensus 72 t~~~V~I~I~l-k~v~~e~v~V~f~~~sl~v~i~~~-~--g--------k~y~l~i~~L~~~I~pe~S~~kv~~~kIeI~ 139 (211)
++..+.|.+.| +|+.+++|.|.+..+.|+|+..-. . + ..|.=.+ .|-..|+++.-+-+..++.+.|+
T Consensus 231 ~~~~~~v~~~ldPG~~~edi~V~v~~~~LtI~ge~~~~~~~~~~~Er~~g~F~R~~-~LP~~vd~~~i~A~~~dGvL~i~ 309 (314)
T 2bol_A 231 GSKKIHLELKVDPHFAPKDVKVWAKGNKVYVHGVTGKEEKTENASHSEHREFYKAF-VTPEVVDASKTQAEIVDGLMVVE 309 (314)
T ss_dssp SCEEEEEEEECCTTCCGGGEEEEESSSEEEEEEEEC------------CEEEEEEE-ECSSEECGGGCEEEEETTEEEEE
T ss_pred CCcEEEEEEEcCCCCChHHeEEEEECCEEEEEEEEeccCCceEEEEEeeeEEEEEE-ECCCCcChHHeEEEEeCCEEEEE
Confidence 45678889999 999999999999999999988421 1 1 1244444 77889999999999999999999
Q ss_pred Eeec
Q 028262 140 LFKA 143 (211)
Q Consensus 140 L~K~ 143 (211)
|-|.
T Consensus 310 ~Pk~ 313 (314)
T 2bol_A 310 APLF 313 (314)
T ss_dssp EEEE
T ss_pred EecC
Confidence 8874
No 30
>2yf2_A C4B binding protein; immune system, complement system; 2.24A {Gallus gallus}
Probab=62.91 E-value=9 Score=24.86 Aligned_cols=25 Identities=24% Similarity=0.266 Sum_probs=19.8
Q ss_pred HHHHHHHHHHhcchhHHHHHHHHHHHHhhhhh
Q 028262 9 LEELRQLRSIAKRPRIVSLINSEIHTLEKLSK 40 (211)
Q Consensus 9 l~E~~~ll~~a~r~~v~~~l~~~~~~~e~~~~ 40 (211)
++|++.||+. .-|-.||++|+.|+.
T Consensus 27 ~~~~rTLLEi-------~KL~LEIQKL~~EL~ 51 (65)
T 2yf2_A 27 TEDVKTLLEI-------RKLFLEIQKLKVELQ 51 (65)
T ss_dssp HHHHHHHHHH-------HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHH-------HHHHHHHHHHHHHHc
Confidence 6899999984 346789999998864
No 31
>1q08_A Zn(II)-responsive regulator of ZNTA; MERR family transcriptional regulator; 1.90A {Escherichia coli} SCOP: a.6.1.3 PDB: 1q09_A 1q0a_A
Probab=48.81 E-value=22 Score=24.48 Aligned_cols=34 Identities=24% Similarity=0.346 Sum_probs=26.3
Q ss_pred HHHHHHHHHHHh------cchhHHHHHHHHHHHHhhhhhc
Q 028262 8 DLEELRQLRSIA------KRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 8 dl~E~~~ll~~a------~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
=|+|++.+|... +.+.+..+|...+..|+.+|..
T Consensus 18 sL~eIk~~l~~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~ 57 (99)
T 1q08_A 18 SLESIRELLSIRIDPEHHTCQESKGIVQERLQEVEARIAE 57 (99)
T ss_dssp CHHHHHHHHHHHHCGGGCBHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhCCCcccHHHHHHHHHHHHHHHHHHHHH
Confidence 478999998764 3357889999998888877764
No 32
>1sz9_A PCF11 protein; RNA polymerase II CTD interacting domain, arm repeats, transcription; 2.10A {Saccharomyces cerevisiae} SCOP: a.118.9.4 PDB: 1sza_A* 2bf0_X
Probab=43.29 E-value=19 Score=27.39 Aligned_cols=27 Identities=15% Similarity=0.311 Sum_probs=23.2
Q ss_pred chhHHHHHHHHhcCCCHHHHHHHHHHH
Q 028262 169 MAGIMDLMKNMYEEGDDEMKRTIAKAW 195 (211)
Q Consensus 169 ~~~l~~l~k~iY~~gDde~kRam~Ks~ 195 (211)
...|.++|...|..+|+++|+.|.+-+
T Consensus 83 ~~~l~~~f~~~~~~~d~~~r~k~~rL~ 109 (144)
T 1sz9_A 83 SRNLFNLYKRTYLLVDNTTRTKLINMF 109 (144)
T ss_dssp HTTHHHHHHHHHHTSCHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 346899999999999999999988753
No 33
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=40.97 E-value=29 Score=25.79 Aligned_cols=63 Identities=17% Similarity=0.344 Sum_probs=45.9
Q ss_pred EeecCCEEEEEEEeCCCCCCCcEEEEEee-EEEEEEEeCCC-ceeEEecCCcCCCccCCCceEEEeCC
Q 028262 69 WDQDNEKVKIYISLEGVVQDKMEAEFKQW-SFDVKFHDVQG-KNYRFTSPRLNQEIVPEKSKVLVKPT 134 (211)
Q Consensus 69 W~Qt~~~V~I~I~lk~v~~e~v~V~f~~~-sl~v~i~~~~g-k~y~l~i~~L~~~I~pe~S~~kv~~~ 134 (211)
=.|.++.|.+++.+.|.....+.+.|... .++|.+.+.+| +-|+++-+..|-... ....+.++
T Consensus 13 ~~~~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v~d~~G~~VwrwS~~~~FtQa~---~~~tl~pG 77 (120)
T 3isy_A 13 AIQEPEQIKFNMSLKNQSERAIEFQFSTGQKFELVVYDSEHKERYRYSKEKMFTQAF---QNLTLESG 77 (120)
T ss_dssp EEECSSCEEEEEEEEECSSSCEEEEESSSCCEEEEEECTTCCEEEETTTTCCCCCCC---EEEEECTT
T ss_pred eccCCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEEECCCCCEEEEccccchhhhhh---ceEEECCC
Confidence 35677889999999988888999999886 55999987555 346666667776632 35556655
No 34
>3d0w_A YFLH protein; GRAM-positive bacterium, structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.00A {Bacillus subtilis}
Probab=37.25 E-value=37 Score=24.71 Aligned_cols=34 Identities=18% Similarity=0.385 Sum_probs=30.0
Q ss_pred CCCCchhHHHHHHHHhcCCCHHHHHHHHHHHHHh
Q 028262 165 ERDPMAGIMDLMKNMYEEGDDEMKRTIAKAWTDA 198 (211)
Q Consensus 165 ~~dp~~~l~~l~k~iY~~gDde~kRam~Ks~~ES 198 (211)
..||...=..++|.|.+-||++-|++|+-+++.-
T Consensus 67 ~vdP~N~EerlLkELW~Va~eeEq~~LA~mmvKL 100 (104)
T 3d0w_A 67 HEEPQNGEEMLLQELWSVADEDEKEHLAQLLVKL 100 (104)
T ss_dssp CCCCCSHHHHHHHHHHHHCCHHHHHHHHHHHHHH
T ss_pred cCCCCCHHHHHHHHHHHhCCHHHHHHHHHHHHHH
Confidence 4688877889999999999999999999988764
No 35
>2lw9_A Unconventionnal myosin-X; MYO10 anti-CC, motor protein; NMR {Homo sapiens}
Probab=28.70 E-value=20 Score=22.64 Aligned_cols=26 Identities=15% Similarity=0.107 Sum_probs=19.0
Q ss_pred HHHHHHhcchhHHHHHHHHHHHHhhh
Q 028262 13 RQLRSIAKRPRIVSLINSEIHTLEKL 38 (211)
Q Consensus 13 ~~ll~~a~r~~v~~~l~~~~~~~e~~ 38 (211)
-.+|.-++|.+++..=.+||..||++
T Consensus 26 ~~~L~e~s~~eL~~~RD~El~RLe~E 51 (51)
T 2lw9_A 26 ELSLTEASLQKLQERRDQELRRLEEE 51 (51)
T ss_dssp HHHHCTTHHHHHHHHHHHHSCCCSCC
T ss_pred HHHHhHhHHHHHHHHHHHHHHHhhcC
Confidence 34566688888888888888777753
No 36
>1lq7_A Alpha3W; three helix bundle, de novo protein; NMR {} SCOP: k.9.1.1
Probab=25.01 E-value=1.3e+02 Score=19.33 Aligned_cols=38 Identities=24% Similarity=0.279 Sum_probs=22.0
Q ss_pred hhHHHHHHHHHHHHHHH-hcchhHHHHHHHHHHHHhhhhh
Q 028262 2 AEDLVLDLEELRQLRSI-AKRPRIVSLINSEIHTLEKLSK 40 (211)
Q Consensus 2 ~~~l~~dl~E~~~ll~~-a~r~~v~~~l~~~~~~~e~~~~ 40 (211)
+++|..--+||+.-++. .---.|+. ...|..+||.+|+
T Consensus 27 ieelkkkweelkkkieelggggevkk-veeevkkleeeik 65 (67)
T 1lq7_A 27 IEELKKKWEELKKKIEELGGGGEVKK-VEEEVKKLEEEIK 65 (67)
T ss_dssp HHHHHHHHHHHHHHHHHTTSSSTHHH-HHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhCCCcchhH-HHHHHHHHHHHHh
Confidence 46777777777665543 22233332 3456777777664
No 37
>2lf0_A Uncharacterized protein YIBL; two-domain protein, structural genomics, PSI-biology, protei structure initiative; NMR {Shigella flexneri}
Probab=24.83 E-value=89 Score=23.27 Aligned_cols=41 Identities=17% Similarity=0.091 Sum_probs=31.8
Q ss_pred ChhHHHHHHHHHHHHHHHhcch----------hHHHHHHHHHHHHhhhhhc
Q 028262 1 MAEDLVLDLEELRQLRSIAKRP----------RIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 1 ~~~~l~~dl~E~~~ll~~a~r~----------~v~~~l~~~~~~~e~~~~~ 41 (211)
|-+.++.+|.-|..-|..+.|+ -+..-+..||.+|+++|..
T Consensus 4 Mke~~K~Eiq~L~drLD~~~rKlaaa~~rgd~~~i~qf~~E~~~l~k~I~~ 54 (123)
T 2lf0_A 4 MKEVEKNEIKRLSDRLDAIRHQQADLSLVEAADKYAELEKEKATLEAEIAR 54 (123)
T ss_dssp CCCSHHHHHHHHHHHHHHHHHHHHHSCTTTCTTHHHHHHHHHHHHHHHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHhCCCHHHHHHHHHHHHHHHHHHHH
Confidence 3466788888888888887775 3667778899999988865
No 38
>3gp4_A Transcriptional regulator, MERR family; structural genomics, DNA-BI transcription regulator, PSI-2; 1.85A {Listeria monocytogenes str}
Probab=22.91 E-value=1e+02 Score=23.02 Aligned_cols=34 Identities=12% Similarity=0.103 Sum_probs=22.2
Q ss_pred HHHHHHHHHHH-----hcchhHHHHHHHHHHHHhhhhhc
Q 028262 8 DLEELRQLRSI-----AKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 8 dl~E~~~ll~~-----a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
-|+|++.++.. .+-+.+..+|...+..|+.+|..
T Consensus 61 sL~eIk~~l~~~~~~~~~~~~~~~~L~~~~~~l~~~i~~ 99 (142)
T 3gp4_A 61 SIEALIDYLALFREGEHTLEARAELLKKQRIELKNRIDV 99 (142)
T ss_dssp CHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHHhccCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 36677777764 34456677777777777766543
No 39
>3gpv_A Transcriptional regulator, MERR family; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.90A {Bacillus thuringiensis serovarkonkukian}
Probab=21.28 E-value=1.1e+02 Score=22.90 Aligned_cols=34 Identities=9% Similarity=0.210 Sum_probs=23.3
Q ss_pred HHHHHHHHHHH-----hcchhHHHHHHHHHHHHhhhhhc
Q 028262 8 DLEELRQLRSI-----AKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 8 dl~E~~~ll~~-----a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
-|+|++.++.. .+.+.+..+|...+..|+.+|..
T Consensus 75 sL~eIk~~l~~~~~~~~~~~~~~~~l~~~~~~l~~~i~~ 113 (148)
T 3gpv_A 75 PIQKIKQFIDWSMEGDSTILHRLKLMKQQEANVLQLIQD 113 (148)
T ss_dssp CHHHHHHHHHHHHHCGGGHHHHHHHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHhhhcCCCCHHHHHHHHHHHHHHHHHHHHH
Confidence 46777888774 34556777887777777766553
No 40
>1g6u_A Domain swapped dimer; designed three helix bundle, de novo protein; 1.48A {Synthetic} SCOP: k.9.1.1
Probab=20.80 E-value=1.5e+02 Score=17.87 Aligned_cols=32 Identities=28% Similarity=0.392 Sum_probs=24.9
Q ss_pred HHHHHHHHHhcchhHHHHHHHHHHHHhhhhhc
Q 028262 10 EELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 10 ~E~~~ll~~a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
-||+.|-...-.|.-...|..|.+.||+.+..
T Consensus 7 selqalkkegfspeelaaleselqalekklaa 38 (48)
T 1g6u_A 7 SELQALKKEGFSPEELAALESELQALEKKLAA 38 (48)
T ss_dssp HHHHHHHHTTCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCHHHHHHHHHHHHHHHHHHHH
Confidence 46777777778888888888888888876643
No 41
>4fnv_A Heparinase III protein, heparitin sulfate lyase; toroid fold, -sandwich fold, heparan sulfate degradation; 1.60A {Bacteroides thetaiotaomicron}
Probab=20.32 E-value=1.4e+02 Score=28.39 Aligned_cols=40 Identities=18% Similarity=0.316 Sum_probs=26.8
Q ss_pred EEEEEEEeCCC-CCCCcEEEEEe-----eEEEEEEEeCCCceeEEec
Q 028262 75 KVKIYISLEGV-VQDKMEAEFKQ-----WSFDVKFHDVQGKNYRFTS 115 (211)
Q Consensus 75 ~V~I~I~lk~v-~~e~v~V~f~~-----~sl~v~i~~~~gk~y~l~i 115 (211)
+|+|-+++++. .++.+...|+. +.++|.|. .+|+.|.|..
T Consensus 655 ~itvi~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~l~~ 700 (702)
T 4fnv_A 655 YITVILPVNGSTDTSSISAKFIDSGYSENSASVEVS-VNGETHTLSY 700 (702)
T ss_dssp EEEEEEEEESCCTTCCEEEEECSSSCBTTEEEEEEE-ETTEEEEEEE
T ss_pred EEEEEeccCCCCcchheeeeeccCCcCCCceEEEEE-ECCEEeeeee
Confidence 56666677765 45778888864 45555554 2789998764
No 42
>2l3l_A Tubulin-specific chaperone C; tubulin binding cofactor; NMR {Homo sapiens}
Probab=20.32 E-value=1.9e+02 Score=20.88 Aligned_cols=38 Identities=16% Similarity=0.192 Sum_probs=30.8
Q ss_pred HHHHHHHHHHHHHHHhcchhHHHHHHHHHHHHhhhhhc
Q 028262 4 DLVLDLEELRQLRSIAKRPRIVSLINSEIHTLEKLSKE 41 (211)
Q Consensus 4 ~l~~dl~E~~~ll~~a~r~~v~~~l~~~~~~~e~~~~~ 41 (211)
.++.....+..+|+.+.|+...+.+..+|..|++.++.
T Consensus 39 ~F~~~~~~Ie~~l~~~~~~~~ld~i~~~I~~Lqk~v~d 76 (111)
T 2l3l_A 39 TFARERAAVEELLERAESVERLEEAASRLQGLQKLIND 76 (111)
T ss_dssp HHHHHHHHHHHHHHHCCSHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCchhhHHHHHHHHHHHHHHHHHH
Confidence 34555667777888887888899999999999998875
Done!