Your job contains 1 sequence.
>028267
MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR
KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNI
HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACA
PTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028267
(211 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2075034 - symbol:AT3G09720 species:3702 "Arabi... 591 1.7e-57 1
UNIPROTKB|A5D7C1 - symbol:DDX52 "Probable ATP-dependent R... 273 9.6e-26 2
MGI|MGI:1925644 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) bo... 268 1.0e-25 2
UNIPROTKB|Q9Y2R4 - symbol:DDX52 "Probable ATP-dependent R... 259 1.0e-24 2
UNIPROTKB|E2RB54 - symbol:DDX52 "Uncharacterized protein"... 271 9.9e-23 1
DICTYBASE|DDB_G0274325 - symbol:ddx52 "DEAD/DEAH box heli... 270 1.6e-22 1
UNIPROTKB|J9P4L6 - symbol:DDX52 "Uncharacterized protein"... 266 3.4e-22 1
RGD|621743 - symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box pol... 266 3.4e-22 1
UNIPROTKB|I3LJA0 - symbol:DDX52 "Uncharacterized protein"... 256 2.6e-21 1
ZFIN|ZDB-GENE-060623-1 - symbol:ddx52 "DEAD (Asp-Glu-Ala-... 256 4.3e-21 1
SGD|S000003139 - symbol:ROK1 "RNA-dependent ATPase" speci... 253 7.6e-21 1
UNIPROTKB|F1NQA6 - symbol:DDX52 "Uncharacterized protein"... 227 2.7e-20 2
UNIPROTKB|E1C4M1 - symbol:DDX52 "Uncharacterized protein"... 227 2.7e-20 2
UNIPROTKB|A8MTP9 - symbol:DDX52 "Probable ATP-dependent R... 245 3.8e-20 1
WB|WBGene00017162 - symbol:ddx-23 species:6239 "Caenorhab... 230 3.9e-18 1
FB|FBgn0036754 - symbol:CG5589 species:7227 "Drosophila m... 227 5.6e-18 1
FB|FBgn0032690 - symbol:CG10333 species:7227 "Drosophila ... 224 2.1e-17 1
UNIPROTKB|I3LNN1 - symbol:DDX23 "Uncharacterized protein"... 218 8.9e-17 1
RGD|1308685 - symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box po... 218 9.2e-17 1
UNIPROTKB|A6QLB2 - symbol:DDX23 "Uncharacterized protein"... 218 9.2e-17 1
UNIPROTKB|E2RTL6 - symbol:DDX23 "Uncharacterized protein"... 218 9.2e-17 1
UNIPROTKB|Q9BUQ8 - symbol:DDX23 "Probable ATP-dependent R... 218 9.2e-17 1
ZFIN|ZDB-GENE-030131-6215 - symbol:ddx23 "DEAD (Asp-Glu-A... 214 2.4e-16 1
TAIR|locus:2057640 - symbol:AT2G33730 species:3702 "Arabi... 185 1.3e-15 2
POMBASE|SPCC63.11 - symbol:prp28 "U5 snRNP-associated pro... 199 7.1e-15 1
ASPGD|ASPL0000051195 - symbol:AN1634 species:162425 "Emer... 198 1.2e-14 1
CGD|CAL0001091 - symbol:orf19.672 species:5476 "Candida a... 190 5.3e-14 1
UNIPROTKB|Q59W52 - symbol:PRP28 "Pre-mRNA-splicing ATP-de... 190 5.3e-14 1
UNIPROTKB|A3KN07 - symbol:DDX41 "Uncharacterized protein"... 190 5.9e-14 1
UNIPROTKB|E2R052 - symbol:DDX41 "Uncharacterized protein"... 190 5.9e-14 1
UNIPROTKB|Q9UJV9 - symbol:DDX41 "Probable ATP-dependent R... 190 5.9e-14 1
UNIPROTKB|J3KNN5 - symbol:DDX41 "Probable ATP-dependent R... 190 6.2e-14 1
UNIPROTKB|J9NZF6 - symbol:DDX41 "Uncharacterized protein"... 190 6.4e-14 1
MGI|MGI:1920185 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) bo... 189 7.6e-14 1
UNIPROTKB|H0YI52 - symbol:DDX23 "Probable ATP-dependent R... 179 7.9e-14 1
TAIR|locus:2074899 - symbol:AT3G09620 species:3702 "Arabi... 190 1.2e-13 1
RGD|1311758 - symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box po... 187 1.2e-13 1
RGD|1559513 - symbol:RGD1559513 "similar to DEAD (Asp-Glu... 186 1.6e-13 1
TAIR|locus:2065215 - symbol:AT2G47330 species:3702 "Arabi... 157 2.6e-13 2
TAIR|locus:2037416 - symbol:RCF1 "regulator of CBF gene e... 187 3.1e-13 1
DICTYBASE|DDB_G0277857 - symbol:helB2 "putative U5 small ... 185 3.2e-13 1
UNIPROTKB|Q5F485 - symbol:DDX42 "ATP-dependent RNA helica... 185 3.8e-13 1
UNIPROTKB|F1NAH6 - symbol:LOC100859810 "Uncharacterized p... 182 4.1e-13 1
UNIPROTKB|Q90ZF6 - symbol:olvas "VASA" species:8090 "Oryz... 180 7.0e-13 1
TAIR|locus:2119176 - symbol:AT4G33370 species:3702 "Arabi... 179 7.1e-13 1
GENEDB_PFALCIPARUM|PFE0925c - symbol:PFE0925c "snrnp prot... 169 8.5e-13 2
UNIPROTKB|Q8I0W7 - symbol:PFE0925c "Snrnp protein, putati... 169 8.5e-13 2
UNIPROTKB|F1P0H1 - symbol:DDX42 "ATP-dependent RNA helica... 180 8.6e-13 1
UNIPROTKB|Q3MSQ8 - symbol:ddx4 "Probable ATP-dependent RN... 179 1.1e-12 1
UNIPROTKB|F1NJ40 - symbol:DDX42 "ATP-dependent RNA helica... 180 1.3e-12 1
UNIPROTKB|D6RJA6 - symbol:DDX46 "Probable ATP-dependent R... 174 1.9e-12 1
ZFIN|ZDB-GENE-990415-272 - symbol:vasa "vasa homolog" spe... 175 3.0e-12 1
TAIR|locus:2041549 - symbol:AT2G42520 species:3702 "Arabi... 174 3.2e-12 1
UNIPROTKB|Q5R7D1 - symbol:DDX42 "ATP-dependent RNA helica... 176 3.5e-12 1
FB|FBgn0030631 - symbol:CG6227 species:7227 "Drosophila m... 156 3.6e-12 2
MGI|MGI:1919297 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) bo... 175 4.4e-12 1
RGD|1304909 - symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box po... 175 4.4e-12 1
UNIPROTKB|E2RFF1 - symbol:DDX42 "Uncharacterized protein"... 175 4.4e-12 1
UNIPROTKB|E1BJD2 - symbol:DDX42 "Uncharacterized protein"... 175 4.5e-12 1
POMBASE|SPBP8B7.16c - symbol:dbp2 "ATP-dependent RNA heli... 171 5.3e-12 1
DICTYBASE|DDB_G0287361 - symbol:ddx41 "DEAD box protein a... 172 5.7e-12 1
UNIPROTKB|Q7L014 - symbol:DDX46 "Probable ATP-dependent R... 174 6.4e-12 1
UNIPROTKB|F1MX40 - symbol:DDX46 "Uncharacterized protein"... 174 6.4e-12 1
UNIPROTKB|F1PK90 - symbol:DDX46 "Uncharacterized protein"... 174 6.4e-12 1
UNIPROTKB|I3LR20 - symbol:DDX46 "Uncharacterized protein"... 174 6.4e-12 1
MGI|MGI:1920895 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) bo... 174 6.4e-12 1
RGD|708480 - symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box pol... 174 6.4e-12 1
UNIPROTKB|Q62780 - symbol:Ddx46 "Probable ATP-dependent R... 174 6.4e-12 1
ZFIN|ZDB-GENE-050706-53 - symbol:ddx42 "DEAD (Asp-Glu-Ala... 172 8.9e-12 1
UNIPROTKB|Q86XP3 - symbol:DDX42 "ATP-dependent RNA helica... 172 9.2e-12 1
TAIR|locus:2176192 - symbol:AT5G51280 species:3702 "Arabi... 169 9.9e-12 1
ZFIN|ZDB-GENE-030131-1927 - symbol:ddx41 "DEAD (Asp-Glu-A... 167 1.1e-11 1
MGI|MGI:2136689 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) bo... 167 1.1e-11 1
UNIPROTKB|Q9Y6V7 - symbol:DDX49 "Probable ATP-dependent R... 167 1.1e-11 1
UNIPROTKB|F1S7D9 - symbol:DDX49 "Uncharacterized protein"... 167 1.1e-11 1
UNIPROTKB|E2RBM7 - symbol:DDX49 "Uncharacterized protein"... 167 1.2e-11 1
UNIPROTKB|F1N0P2 - symbol:DDX49 "Uncharacterized protein"... 165 1.2e-11 1
UNIPROTKB|H0Y960 - symbol:DDX4 "Probable ATP-dependent RN... 162 1.3e-11 1
UNIPROTKB|Q91372 - symbol:ddx4 "Probable ATP-dependent RN... 169 1.3e-11 1
UNIPROTKB|F1SLL4 - symbol:LOC100626422 "Uncharacterized p... 158 1.3e-11 1
TAIR|locus:2081061 - symbol:AT3G06480 species:3702 "Arabi... 171 1.4e-11 1
TAIR|locus:2828586 - symbol:AT3G02065 species:3702 "Arabi... 166 1.6e-11 1
TAIR|locus:2162022 - symbol:AT5G63120 species:3702 "Arabi... 166 2.1e-11 1
UNIPROTKB|E1BSC0 - symbol:DDX46 "Uncharacterized protein"... 169 2.2e-11 1
TAIR|locus:2076436 - symbol:AT3G58570 species:3702 "Arabi... 166 2.4e-11 1
WB|WBGene00006888 - symbol:vbh-1 species:6239 "Caenorhabd... 165 3.2e-11 1
FB|FBgn0036104 - symbol:CG6418 species:7227 "Drosophila m... 166 3.2e-11 1
TAIR|locus:2076351 - symbol:AT3G58510 species:3702 "Arabi... 164 3.6e-11 1
UNIPROTKB|D6RCM4 - symbol:DDX4 "Probable ATP-dependent RN... 162 4.5e-11 1
FB|FBgn0015331 - symbol:abs "abstrakt" species:7227 "Dros... 163 4.7e-11 1
RGD|1311124 - symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box po... 161 5.0e-11 1
CGD|CAL0003204 - symbol:DBP2 species:5476 "Candida albica... 162 5.2e-11 1
ZFIN|ZDB-GENE-980526-150 - symbol:pl10 "pl10" species:795... 163 5.5e-11 1
UNIPROTKB|Q9KS53 - symbol:VC1407 "ATP-dependent RNA helic... 159 5.7e-11 1
TIGR_CMR|VC_1407 - symbol:VC_1407 "ATP-dependent RNA heli... 159 5.7e-11 1
UNIPROTKB|Q4R5S7 - symbol:DDX4 "Probable ATP-dependent RN... 163 6.0e-11 1
CGD|CAL0003464 - symbol:orf19.5991 species:5476 "Candida ... 164 6.3e-11 1
DICTYBASE|DDB_G0281925 - symbol:DDB_G0281925 "DEAD/DEAH b... 161 7.1e-11 1
MGI|MGI:102670 - symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box ... 162 7.3e-11 1
UNIPROTKB|D6RDK4 - symbol:DDX4 "Probable ATP-dependent RN... 162 7.3e-11 1
WARNING: Descriptions of 399 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2075034 [details] [associations]
symbol:AT3G09720 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009220
"pyrimidine ribonucleotide biosynthetic process" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723 EMBL:AC016661
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000242486 KO:K14779 OMA:NVMKQSG EMBL:BT005833
EMBL:AK227326 IPI:IPI00542757 RefSeq:NP_187583.2 UniGene:At.40050
ProteinModelPortal:Q84TG1 SMR:Q84TG1 STRING:Q84TG1 PaxDb:Q84TG1
PRIDE:Q84TG1 EnsemblPlants:AT3G09720.1 GeneID:820129
KEGG:ath:AT3G09720 KEGG:dosa:Os07t0647900-01 GeneFarm:1036
TAIR:At3g09720 InParanoid:Q84TG1 PhylomeDB:Q84TG1
ProtClustDB:CLSN2690529 Genevestigator:Q84TG1 GermOnline:AT3G09720
Uniprot:Q84TG1
Length = 541
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 123/206 (59%), Positives = 154/206 (74%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESE--NLADDFSFVEGEKTD-PE--KAMVS 55
MEK + FLF G +F+KKKF DFA+FK + E + N +F E E T+ PE K +VS
Sbjct: 1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVS 60
Query: 56 FVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGP--SKAKKELNKQIERDAV 113
KKRKR+S VEGF+VFKSSK+ A K +E++ KKELN+Q+ERDA+
Sbjct: 61 S-KKRKRRSSNSVPVEGFDVFKSSKK-ARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK+Y+IHVSG N+P PL++F +LSSR+GCE Y+LRNLAELG+KEPTPIQRQAIP+LLS
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RECFACAPTGSGKT AF+CPML+KL+
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLK 204
>UNIPROTKB|A5D7C1 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9913 "Bos taurus" [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:BC140501 IPI:IPI00692860
RefSeq:NP_001096708.1 UniGene:Bt.51117 ProteinModelPortal:A5D7C1
SMR:A5D7C1 PRIDE:A5D7C1 Ensembl:ENSBTAT00000013622 GeneID:510826
KEGG:bta:510826 CTD:11056 GeneTree:ENSGT00550000074863
HOGENOM:HOG000242486 HOVERGEN:HBG051332 InParanoid:A5D7C1 KO:K14779
OMA:NVMKQSG OrthoDB:EOG4XKV6Q NextBio:20869637 ArrayExpress:A5D7C1
Uniprot:A5D7C1
Length = 596
Score = 273 (101.2 bits), Expect = 9.6e-26, Sum P(2) = 9.6e-26
Identities = 66/161 (40%), Positives = 95/161 (59%)
Query: 45 EKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL 104
EKT+ E + + RK+K I E V S+ Q + +V+ K+ED K K +L
Sbjct: 72 EKTE-ESQIERKKQNRKKKKITSEITSEEEV--STIQWISSVEA---KIEDKNVKRKNKL 125
Query: 105 N----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+Q+ ++ + FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 126 TSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQT 185
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM L+
Sbjct: 186 PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLK 226
Score = 49 (22.3 bits), Expect = 9.6e-26, Sum P(2) = 9.6e-26
Identities = 12/37 (32%), Positives = 18/37 (48%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEG 44
L G FD ++F D ARF+ K + D ++G
Sbjct: 10 LGVGAKFDLRRFSADAARFQIGKRKYDF-DSSEVLQG 45
>MGI|MGI:1925644 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008150 "biological_process" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1925644 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 EMBL:CH466556 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AK080767 EMBL:AK133545 EMBL:AL645615 EMBL:BC029094
IPI:IPI00336965 RefSeq:NP_084372.2 UniGene:Mm.280544
ProteinModelPortal:Q8K301 SMR:Q8K301 STRING:Q8K301
PhosphoSite:Q8K301 PaxDb:Q8K301 PRIDE:Q8K301
Ensembl:ENSMUST00000049257 GeneID:78394 KEGG:mmu:78394
InParanoid:Q3UZY9 NextBio:348796 Bgee:Q8K301 CleanEx:MM_DDX52
Genevestigator:Q8K301 GermOnline:ENSMUSG00000020677 Uniprot:Q8K301
Length = 598
Score = 268 (99.4 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 62/146 (42%), Positives = 86/146 (58%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVEDGPSKAKKELNKQIERDAV-- 113
KK+KRK + E V F Q +V+ + EKV G K + + ++ V
Sbjct: 86 KKKKRKKMTSE-VPAQEDFDGGIQWTSSVEAKLQDEKVS-GEKKLTSGKLEHLRKEKVNF 143
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLK 229
Score = 54 (24.1 bits), Expect = 1.0e-25, Sum P(2) = 1.0e-25
Identities = 14/31 (45%), Positives = 18/31 (58%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK---ESENL 35
L AG FD K+F D RF+ K +SE+L
Sbjct: 10 LGAGAKFDVKRFSADATRFQVGKRKFDSESL 40
>UNIPROTKB|Q9Y2R4 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:11056 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AF077033 EMBL:AK001652 EMBL:AK093661 EMBL:AC091199
EMBL:BC041785 EMBL:AJ010840 IPI:IPI00032423 RefSeq:NP_008941.2
UniGene:Hs.590937 PDB:3DKP PDBsum:3DKP ProteinModelPortal:Q9Y2R4
SMR:Q9Y2R4 IntAct:Q9Y2R4 STRING:Q9Y2R4 PhosphoSite:Q9Y2R4
DMDM:296439375 SWISS-2DPAGE:Q9Y2R4 PaxDb:Q9Y2R4 PRIDE:Q9Y2R4
Ensembl:ENST00000349699 GeneID:11056 KEGG:hsa:11056 UCSC:uc002hoh.2
GeneCards:GC17M035969 HGNC:HGNC:20038 MIM:612500 neXtProt:NX_Q9Y2R4
PharmGKB:PA134904836 InParanoid:Q9Y2R4 PhylomeDB:Q9Y2R4
ChiTaRS:DDX52 EvolutionaryTrace:Q9Y2R4 GenomeRNAi:11056
NextBio:42007 ArrayExpress:Q9Y2R4 Bgee:Q9Y2R4 CleanEx:HS_DDX52
Genevestigator:Q9Y2R4 GermOnline:ENSG00000141141 Uniprot:Q9Y2R4
Length = 599
Score = 259 (96.2 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 60/144 (41%), Positives = 85/144 (59%)
Query: 59 KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFR 115
K+KRK++ E EG + S DK+ ++ E + K E N + E+ R
Sbjct: 87 KKKRKTMTSEIASQEEGATIQWMSSVEAKIEDKKVQR-ESKLTSGKLE-NLRKEKINFLR 144
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L RE
Sbjct: 145 NKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHGRE 204
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAF P+LM+L+
Sbjct: 205 LLASAPTGSGKTLAFSIPILMQLK 228
Score = 54 (24.1 bits), Expect = 1.0e-24, Sum P(2) = 1.0e-24
Identities = 13/37 (35%), Positives = 19/37 (51%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEG 44
L AG FD ++F D ARF+ K + D ++G
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDF-DSSEVLQG 45
>UNIPROTKB|E2RB54 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:ERESINT
EMBL:AAEX03006616 Ensembl:ENSCAFT00000028820 Uniprot:E2RB54
Length = 601
Score = 271 (100.5 bits), Expect = 9.9e-23, P = 9.9e-23
Identities = 74/196 (37%), Positives = 106/196 (54%)
Query: 14 FDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK------KRKRKSIAG 67
FD + V F NK+S S E D EK S + K+KRK I+G
Sbjct: 37 FDSSE-VLQGLDFFGNKKSVPGERGASRTHQELQDEEKKEESLTERKREQNKKKRKMISG 95
Query: 68 --ETV--EGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVS 123
E + E + + + + ++ +K K E+ + K E N + E+ FR K+ IHV
Sbjct: 96 ILEIISQEEGSTIQWTSSVEAKIEDKKIKRENKLTSGKLE-NLRKEKINFFRNKHKIHVQ 154
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L RE A APTG
Sbjct: 155 GTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTG 214
Query: 184 SGKTLAFLCPMLMKLR 199
SGKTLAF P+LM+L+
Sbjct: 215 SGKTLAFSIPILMQLK 230
>DICTYBASE|DDB_G0274325 [details] [associations]
symbol:ddx52 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006200 "ATP
catabolic process" evidence=ISS] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0274325 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000151_GR GO:GO:0016887 GO:GO:0003723
EMBL:AAFI02000012 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 KO:K14779 RefSeq:XP_643949.1
ProteinModelPortal:Q86IZ9 EnsemblProtists:DDB0234211 GeneID:8619377
KEGG:ddi:DDB_G0274325 OMA:NGITSHE Uniprot:Q86IZ9
Length = 668
Score = 270 (100.1 bits), Expect = 1.6e-22, P = 1.6e-22
Identities = 63/175 (36%), Positives = 93/175 (53%)
Query: 30 KESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKE 89
++ +N DD E E+ + K F+K + E + FN ++ + D +
Sbjct: 89 EDDDNDDDDDDDDEDEENEEPKEK-EFIKHQVNNDEEEEDITLFNKSNENENSDDSDDSD 147
Query: 90 KEKVEDGPSKAKKELNKQIERD------AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
+K KK ++K+ + D A FR K+ I V G ++P P+ F +L +RF
Sbjct: 148 DSGKNKNKNKNKK-VSKETQEDKHKREIATFRNKHRIKVDGTDIPDPMTEFSQLENRFKV 206
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
YLL N+ E+GYKEP+PIQ Q IP+LL +RE A APTGSGKT +F P+L L
Sbjct: 207 RKYLLNNINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQAL 261
>UNIPROTKB|J9P4L6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AAEX03026218 Ensembl:ENSCAFT00000021498 Uniprot:J9P4L6
Length = 598
Score = 266 (98.7 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 60/143 (41%), Positives = 89/143 (62%)
Query: 59 KRKRKSIAGETV--EGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
K+KRK I+ E + E + + + + ++ +K K E+ + K E N + E+ FR
Sbjct: 87 KKKRKMIS-EIISQEEGSTIQWTSSVEAKIEDKKIKRENKLTSGKLE-NLRKEKINFFRN 144
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L RE
Sbjct: 145 KHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGREL 204
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAF P+LM+L+
Sbjct: 205 LASAPTGSGKTLAFSIPILMQLK 227
>RGD|621743 [details] [associations]
symbol:Ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 52"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0003724 "RNA helicase activity" evidence=NAS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=TAS]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:621743
GO:GO:0005524 GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
CTD:11056 GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486
HOVERGEN:HBG051332 KO:K14779 OMA:NVMKQSG OrthoDB:EOG4XKV6Q
EMBL:AB055628 IPI:IPI00201365 RefSeq:NP_445977.1 UniGene:Rn.18605
ProteinModelPortal:Q99PT0 SMR:Q99PT0 PRIDE:Q99PT0
Ensembl:ENSRNOT00000003600 GeneID:85432 KEGG:rno:85432
InParanoid:Q99PT0 NextBio:617542 Genevestigator:Q99PT0
GermOnline:ENSRNOG00000002612 Uniprot:Q99PT0
Length = 598
Score = 266 (98.7 bits), Expect = 3.4e-22, P = 3.4e-22
Identities = 58/145 (40%), Positives = 87/145 (60%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVD-KEKEKVEDGPSKAKKELNKQIERDAV--F 114
KK+KRK + + V + Q +V+ K ++K +G K E + + ++ + F
Sbjct: 86 KKKKRKKMTAD-VPAQEDLDGTIQWTSSVEAKLQDKKANGEKKLTSEKLEHLRKEKINFF 144
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
R K+ IHV G ++P P+ TF +L + LL+N+ + G++ PTPIQ QAIPV+L R
Sbjct: 145 RNKHKIHVQGTDLPDPIATFQQLDQEYKISPRLLQNILDAGFQVPTPIQMQAIPVMLHGR 204
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLR 199
E A APTGSGKTLAF P+LM+L+
Sbjct: 205 ELLASAPTGSGKTLAFSIPILMQLK 229
>UNIPROTKB|I3LJA0 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:FP565631 EMBL:FP312903 Ensembl:ENSSSCT00000024730
Uniprot:I3LJA0
Length = 507
Score = 256 (95.2 bits), Expect = 2.6e-21, P = 2.6e-21
Identities = 52/120 (43%), Positives = 78/120 (65%)
Query: 86 VDKEKEKVEDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSS 139
+ + K+ED K +K+L +++ ++ + FR K+ IHV G ++P P+ TF +L
Sbjct: 17 ISSVEAKIEDTKVKREKKLTSGKLEELRKEKINFFRNKHKIHVQGTDLPDPITTFQQLDQ 76
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ S LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 77 EYKISSRLLQNILDAGFQLPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 136
>ZFIN|ZDB-GENE-060623-1 [details] [associations]
symbol:ddx52 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
52" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-060623-1
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 CTD:11056 HOVERGEN:HBG051332 KO:K14779
OrthoDB:EOG4XKV6Q EMBL:BC117610 IPI:IPI00627696
RefSeq:NP_001037780.1 UniGene:Dr.13799 ProteinModelPortal:Q1ECZ5
STRING:Q1ECZ5 GeneID:407696 KEGG:dre:407696 NextBio:20818558
Uniprot:Q1ECZ5
Length = 606
Score = 256 (95.2 bits), Expect = 4.3e-21, P = 4.3e-21
Identities = 69/202 (34%), Positives = 114/202 (56%)
Query: 3 KGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEK-TDPEKAMVSFVKKRK 61
K +S +G+S+ ++ D + +++ +E+ A++ S E ++ T+ KA K K
Sbjct: 36 KDSSDQLSGISYFGRETQEDTSL--DSRPNEDDAEEASDEEQKQATESLKAARKKKKGAK 93
Query: 62 RKS--IAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS-KAKKEL-NKQIERDAVFRKK 117
RKS ET EG + S Q + K++ +D PS K K+L N+++ R R +
Sbjct: 94 RKSEDAEPETREGEGIQWMSLQ--NKTKEAKQESKDKPSLKRLKQLHNEKVNR---IRHQ 148
Query: 118 YNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
I+V G ++P P+ TF +L + + ++ N+ G++ PTPIQ QA+P+++ RE
Sbjct: 149 NRINVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKAAGFQTPTPIQMQAVPLMMHKREIL 208
Query: 178 ACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKT+AF P+L LR
Sbjct: 209 ACAPTGSGKTMAFCLPLLAHLR 230
>SGD|S000003139 [details] [associations]
symbol:ROK1 "RNA-dependent ATPase" species:4932
"Saccharomyces cerevisiae" [GO:0000447 "endonucleolytic cleavage in
ITS1 to separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0005730 "nucleolus" evidence=IEA;IDA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0030686
"90S preribosome" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0042254 "ribosome biogenesis" evidence=IEA]
[GO:0008186 "RNA-dependent ATPase activity" evidence=IDA]
[GO:0048254 "snoRNA localization" evidence=IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0000472 "endonucleolytic
cleavage to generate mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S
rRNA, LSU-rRNA)" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000003139
GO:GO:0005524 GO:GO:0005730 EMBL:BK006941 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:X85757
GO:GO:0030686 GO:GO:0004004 GO:GO:0000447 GO:GO:0000472
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000480
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG OrthoDB:EOG425926 EMBL:Z34901 EMBL:Z72693 PIR:S59649
RefSeq:NP_011344.1 ProteinModelPortal:P45818 SMR:P45818
DIP:DIP-5111N IntAct:P45818 MINT:MINT-483312 STRING:P45818
PaxDb:P45818 PeptideAtlas:P45818 EnsemblFungi:YGL171W GeneID:852704
KEGG:sce:YGL171W CYGD:YGL171w NextBio:972056 Genevestigator:P45818
GermOnline:YGL171W GO:GO:0048254 Uniprot:P45818
Length = 564
Score = 253 (94.1 bits), Expect = 7.6e-21, P = 7.6e-21
Identities = 58/152 (38%), Positives = 90/152 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV--EDGPSKAKKELN-----KQIER 110
+ K + + V+ + F++ K+++ V+ ++EK D P+K +K N K +
Sbjct: 34 ENHKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTENDSPNKEEKSGNDDGLIKPVIT 92
Query: 111 DAV----FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
+ V RK Y +VSG ++P P+ +F L SRF + LL NL E G+ EPTPIQ +
Sbjct: 93 NTVEASALRKSYKGNVSGIDIPLPIGSFEDLISRFSFDKRLLNNLIENGFTEPTPIQCEC 152
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 153 IPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 184
>UNIPROTKB|F1NQA6 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 EMBL:AADN02025730
IPI:IPI00822952 Ensembl:ENSGALT00000039070 ArrayExpress:F1NQA6
Uniprot:F1NQA6
Length = 603
Score = 227 (85.0 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 52/144 (36%), Positives = 84/144 (58%)
Query: 59 KRKRKSIAGETVEGFNVFKSSKQL-VPAVDKEKEKVEDGPSKAKKELNKQIERDAV--FR 115
KRKRK ETV + +S + + +++ + + +D ++L + + R+ + FR
Sbjct: 81 KRKRKK-RQETVSVPELSESDGIMWMSSLEAKVKDTKDNQKPTAEKLER-LRREKINRFR 138
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
++ I+V G ++P P+ TF +L + ++ N+ G++ PTPIQ QAIPV+L RE
Sbjct: 139 NQHRINVQGTDLPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGRE 198
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAF P+L L+
Sbjct: 199 LLASAPTGSGKTLAFCIPLLTHLK 222
Score = 45 (20.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRK 61
L AG FD ++F D RF + S ++ F G K E+A + V K++
Sbjct: 10 LGAGARFDVRRFGLDARRFGVIRGSGGPPENLDFF-GSK---ERAPLGSVGKQE 59
>UNIPROTKB|E1C4M1 [details] [associations]
symbol:DDX52 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00550000074863 OMA:NVMKQSG
EMBL:AADN02025730 IPI:IPI00593921 ProteinModelPortal:E1C4M1
Ensembl:ENSGALT00000008815 ArrayExpress:E1C4M1 Uniprot:E1C4M1
Length = 604
Score = 227 (85.0 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 52/144 (36%), Positives = 84/144 (58%)
Query: 59 KRKRKSIAGETVEGFNVFKSSKQL-VPAVDKEKEKVEDGPSKAKKELNKQIERDAV--FR 115
KRKRK ETV + +S + + +++ + + +D ++L + + R+ + FR
Sbjct: 81 KRKRKK-RQETVSVPELSESDGIMWMSSLEAKVKDTKDNQKPTAEKLER-LRREKINRFR 138
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
++ I+V G ++P P+ TF +L + ++ N+ G++ PTPIQ QAIPV+L RE
Sbjct: 139 NQHRINVQGTDLPDPIATFDQLQKEYKIHPKVIENIQAAGFQVPTPIQMQAIPVMLHGRE 198
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAF P+L L+
Sbjct: 199 LLASAPTGSGKTLAFCIPLLTHLK 222
Score = 45 (20.9 bits), Expect = 2.7e-20, Sum P(2) = 2.7e-20
Identities = 17/54 (31%), Positives = 26/54 (48%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRK 61
L AG FD ++F D RF + S ++ F G K E+A + V K++
Sbjct: 10 LGAGARFDVRRFGLDARRFGVIRGSGGPPENLDFF-GSK---ERAPLGSVGKQE 59
>UNIPROTKB|A8MTP9 [details] [associations]
symbol:DDX52 "Probable ATP-dependent RNA helicase DDX52"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000242486
HOVERGEN:HBG051332 EMBL:AC091199 HGNC:HGNC:20038
PharmGKB:PA134904836 ChiTaRS:DDX52 NextBio:42007 IPI:IPI00394982
ProteinModelPortal:A8MTP9 SMR:A8MTP9 STRING:A8MTP9 PRIDE:A8MTP9
Ensembl:ENST00000394367 ArrayExpress:A8MTP9 Bgee:A8MTP9
Uniprot:A8MTP9
Length = 491
Score = 245 (91.3 bits), Expect = 3.8e-20, P = 3.8e-20
Identities = 51/114 (44%), Positives = 73/114 (64%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
++ +K + E + K E N + E+ R K+ IHV G ++P P+ TF +L + S
Sbjct: 8 IEDKKVQRESKLTSGKLE-NLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINS 66
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 67 RLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 120
>WB|WBGene00017162 [details] [associations]
symbol:ddx-23 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040007 "growth"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IMP] [GO:0040020 "regulation of meiosis" evidence=IMP]
[GO:0010172 "embryonic body morphogenesis" evidence=IMP]
[GO:0048589 "developmental growth" evidence=IMP] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0040021 "hermaphrodite germ-line sex determination"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0002009 GO:GO:0002119 GO:GO:0040011
GO:GO:0003676 GO:GO:0042127 GO:GO:0040035 GO:GO:0007281
GO:GO:0048589 EMBL:FO080705 GO:GO:0010172 GO:GO:0040020
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 HSSP:Q58083 HOGENOM:HOG000268796
OMA:PIRNWKE GO:GO:0040021 RefSeq:NP_498260.2
ProteinModelPortal:Q95QN2 SMR:Q95QN2 STRING:Q95QN2 PaxDb:Q95QN2
EnsemblMetazoa:F01F1.7 GeneID:175818 KEGG:cel:CELE_F01F1.7
CTD:175818 WormBase:F01F1.7 InParanoid:Q95QN2 NextBio:889790
Uniprot:Q95QN2
Length = 730
Score = 230 (86.0 bits), Expect = 3.9e-18, P = 3.9e-18
Identities = 57/144 (39%), Positives = 83/144 (57%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKE--KEK--VEDGPSKAKKELNKQIERD-A 112
+K+++ S E +E +Q + ++KE KEK D KEL++ +RD
Sbjct: 222 QKKEKNSFYQEMMENRRTVDEKEQEMHRLEKELKKEKKVAHDDRHWRMKELSEMSDRDWR 281
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ +NI + G VP PLR + + F E Y + + E+GY EPTPIQRQAIP+ L
Sbjct: 282 IFREDFNISIKGGRVPRPLRNWEEAG--FPDEVY--QAVKEIGYLEPTPIQRQAIPIGLQ 337
Query: 173 DRECFACAPTGSGKTLAFLCPMLM 196
+R+ A TGSGKT AFL P+L+
Sbjct: 338 NRDVIGVAETGSGKTAAFLLPLLV 361
>FB|FBgn0036754 [details] [associations]
symbol:CG5589 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014296
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 KO:K14779 OMA:NVMKQSG
RefSeq:NP_649009.1 ProteinModelPortal:Q9VVK8 SMR:Q9VVK8
STRING:Q9VVK8 PRIDE:Q9VVK8 EnsemblMetazoa:FBtr0075170 GeneID:39979
KEGG:dme:Dmel_CG5589 UCSC:CG5589-RA FlyBase:FBgn0036754
InParanoid:Q9VVK8 OrthoDB:EOG4QBZMN PhylomeDB:Q9VVK8
GenomeRNAi:39979 NextBio:816380 Bgee:Q9VVK8 Uniprot:Q9VVK8
Length = 594
Score = 227 (85.0 bits), Expect = 5.6e-18, P = 5.6e-18
Identities = 52/112 (46%), Positives = 65/112 (58%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
++K K E S + E+ K E RK+Y I V G NVP P+ +F L+ F L
Sbjct: 71 RKKPKKEKTLSPKELEIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRL 130
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+NL + PTPIQ QA+PVLL R ACAPTGSGKTLAFL P++ LR
Sbjct: 131 QQNLLSRNFDHPTPIQMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLR 182
>FB|FBgn0032690 [details] [associations]
symbol:CG10333 species:7227 "Drosophila melanogaster"
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005681 "spliceosomal complex" evidence=ISS] [GO:0030532 "small
nuclear ribonucleoprotein complex" evidence=ISS] [GO:0005682 "U5
snRNP" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0071011
"precatalytic spliceosome" evidence=IDA] [GO:0071013 "catalytic
step 2 spliceosome" evidence=IDA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014134
GO:GO:0022008 GO:GO:0005682 GO:GO:0003676 GO:GO:0071011
GO:GO:0000398 GO:GO:0071013 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
OMA:PIRNWKE FlyBase:FBgn0032690 EMBL:BT021222 RefSeq:NP_609888.2
UniGene:Dm.456 SMR:Q9VJ74 STRING:Q9VJ74 EnsemblMetazoa:FBtr0081072
GeneID:35112 KEGG:dme:Dmel_CG10333 UCSC:CG10333-RA
InParanoid:Q9VJ74 GenomeRNAi:35112 NextBio:791924 Uniprot:Q9VJ74
Length = 822
Score = 224 (83.9 bits), Expect = 2.1e-17, P = 2.1e-17
Identities = 53/149 (35%), Positives = 85/149 (57%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERD-A 112
+KR + G+ +E +Q + K K K + D ++KE ++ ERD
Sbjct: 315 QKRTQSKFYGDLLEKRRTEAEKEQEKVRLKKMKRKEDKQKWDDRHWSEKENDEMTERDWR 374
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ YN+ + G +P+P+R++ + G ++ + ++GYKEPTPIQRQAIP+ L
Sbjct: 375 IFREDYNVTIKGGRIPNPIRSW----NESGFPKEIIDIIDKVGYKEPTPIQRQAIPIGLQ 430
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKTLAFL P+L ++ L
Sbjct: 431 NRDIIGVAETGSGKTLAFLIPLLSWIQSL 459
>UNIPROTKB|I3LNN1 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:PIRNWKE Ensembl:ENSSSCT00000027880 Uniprot:I3LNN1
Length = 801
Score = 218 (81.8 bits), Expect = 8.9e-17, P = 8.9e-17
Identities = 54/149 (36%), Positives = 88/149 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVE--DGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q + K +KE + D ++K+L++ +RD
Sbjct: 312 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 371
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 372 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 427
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>RGD|1308685 [details] [associations]
symbol:Ddx23 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 23"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005682 "U5 snRNP"
evidence=IEA;ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA;ISO] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1308685 GO:GO:0005524
GO:GO:0003676 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:CH474035 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE
RefSeq:NP_001100263.2 UniGene:Rn.2319 Ensembl:ENSRNOT00000055529
GeneID:300208 KEGG:rno:300208 NextBio:646540 Uniprot:G3V9M1
Length = 819
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/149 (36%), Positives = 88/149 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVE--DGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q + K +KE + D ++K+L++ +RD
Sbjct: 311 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 370
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 371 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 426
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 427 NRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>UNIPROTKB|A6QLB2 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005739 GO:GO:0005886
GO:GO:0005524 GO:GO:0005682 GO:GO:0003676 GO:GO:0071013
GeneTree:ENSGT00690000102171 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 HOGENOM:HOG000268796
HOVERGEN:HBG102054 OMA:PIRNWKE OrthoDB:EOG46T312 EMBL:DAAA02012954
EMBL:BC147902 IPI:IPI00866828 RefSeq:NP_001095672.1
UniGene:Bt.14027 STRING:A6QLB2 Ensembl:ENSBTAT00000029071
GeneID:537395 KEGG:bta:537395 InParanoid:A6QLB2 NextBio:20877127
Uniprot:A6QLB2
Length = 820
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/149 (36%), Positives = 88/149 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVE--DGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q + K +KE + D ++K+L++ +RD
Sbjct: 312 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 371
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 372 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 427
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>UNIPROTKB|E2RTL6 [details] [associations]
symbol:DDX23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005682 "U5 snRNP"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005682 GO:GO:0003676
GO:GO:0071013 GeneTree:ENSGT00690000102171 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 CTD:9416 OMA:PIRNWKE EMBL:AAEX03015077
RefSeq:XP_851051.1 ProteinModelPortal:E2RTL6
Ensembl:ENSCAFT00000013894 GeneID:477624 KEGG:cfa:477624
NextBio:20853071 Uniprot:E2RTL6
Length = 820
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/149 (36%), Positives = 88/149 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVE--DGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q + K +KE + D ++K+L++ +RD
Sbjct: 312 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 371
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 372 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 427
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>UNIPROTKB|Q9BUQ8 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000375
"RNA splicing, via transesterification reactions" evidence=TAS]
[GO:0000398 "mRNA splicing, via spliceosome" evidence=IC;TAS]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=IC]
[GO:0005682 "U5 snRNP" evidence=IDA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0008380 "RNA splicing" evidence=TAS] [GO:0010467
"gene expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:AF026402 GO:GO:0005739
GO:GO:0005886 GO:GO:0005524 GO:GO:0005654 Reactome:REACT_1675
GO:GO:0005682 GO:GO:0003676 EMBL:CH471111 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
KO:K12858 EMBL:AK312379 EMBL:BC002366 IPI:IPI00006725
RefSeq:NP_004809.2 UniGene:Hs.130098 ProteinModelPortal:Q9BUQ8
SMR:Q9BUQ8 DIP:DIP-34974N IntAct:Q9BUQ8 MINT:MINT-1572793
STRING:Q9BUQ8 PhosphoSite:Q9BUQ8 DMDM:160385708 PaxDb:Q9BUQ8
PRIDE:Q9BUQ8 DNASU:9416 Ensembl:ENST00000308025 GeneID:9416
KEGG:hsa:9416 UCSC:uc001rsm.3 CTD:9416 GeneCards:GC12M049223
HGNC:HGNC:17347 HPA:HPA038680 MIM:612172 neXtProt:NX_Q9BUQ8
PharmGKB:PA134934941 HOGENOM:HOG000268796 HOVERGEN:HBG102054
InParanoid:Q9BUQ8 OMA:PIRNWKE OrthoDB:EOG46T312 PhylomeDB:Q9BUQ8
GenomeRNAi:9416 NextBio:35278 ArrayExpress:Q9BUQ8 Bgee:Q9BUQ8
CleanEx:HS_DDX23 Genevestigator:Q9BUQ8 GermOnline:ENSG00000174243
Uniprot:Q9BUQ8
Length = 820
Score = 218 (81.8 bits), Expect = 9.2e-17, P = 9.2e-17
Identities = 54/149 (36%), Positives = 88/149 (59%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK--EKEKVE--DGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q + K +KE + D ++K+L++ +RD
Sbjct: 312 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 371
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 372 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 427
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>ZFIN|ZDB-GENE-030131-6215 [details] [associations]
symbol:ddx23 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 23" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-6215
GO:GO:0005524 GO:GO:0003676 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
CTD:9416 HOGENOM:HOG000268796 HOVERGEN:HBG102054 OrthoDB:EOG46T312
EMBL:CR936486 EMBL:CR354537 EMBL:BC060524 IPI:IPI00509665
RefSeq:NP_956176.1 UniGene:Dr.78688 STRING:Q6P9Z2
Ensembl:ENSDART00000019620 GeneID:334283 KEGG:dre:334283
InParanoid:Q6P9Z2 NextBio:20810336 Uniprot:Q6P9Z2
Length = 807
Score = 214 (80.4 bits), Expect = 2.4e-16, P = 2.4e-16
Identities = 52/149 (34%), Positives = 85/149 (57%)
Query: 58 KKRKRKSIAGETVEG--FNVFKSSK-QLVPAVDKEKEKVE-DGPSKAKKELNKQIERD-A 112
+KR + G+ +E N K + Q + V K++ K D ++K+L++ +RD
Sbjct: 299 QKRDQSRFYGDLMEKRRTNEEKEQEEQRLKKVRKKEAKQRWDDRHWSQKKLDEMTDRDWR 358
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R + + ++L + + GYK+PTPIQRQAIP+ L
Sbjct: 359 IFREDYSITTKGGKIPNPIRNW----KEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQ 414
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 415 NRDIIGVAETGSGKTAAFLIPLLVWITTL 443
>TAIR|locus:2057640 [details] [associations]
symbol:AT2G33730 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0006486 "protein glycosylation"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0008380
GO:GO:0006397 GO:GO:0003723 EMBL:U78721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE EMBL:AY065194 EMBL:AY093244 IPI:IPI00525282 PIR:H84748
RefSeq:NP_180929.1 UniGene:At.27506 ProteinModelPortal:P93008
SMR:P93008 STRING:P93008 PaxDb:P93008 PRIDE:P93008
EnsemblPlants:AT2G33730.1 GeneID:817938 KEGG:ath:AT2G33730
GeneFarm:938 TAIR:At2g33730 InParanoid:P93008 PhylomeDB:P93008
ProtClustDB:CLSN2683508 Genevestigator:P93008 GermOnline:AT2G33730
Uniprot:P93008
Length = 733
Score = 185 (70.2 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 41/95 (43%), Positives = 59/95 (62%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L + ERD +FR+ +NI G+ +P P+R++ + S+ E LL+ + GYK+P+
Sbjct: 282 KRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEE--SKLTSE--LLKAVERAGYKKPS 337
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 338 PIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
Score = 46 (21.3 bits), Expect = 1.3e-15, Sum P(2) = 1.3e-15
Identities = 8/25 (32%), Positives = 17/25 (68%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD 111
++EKE+ E+ ++ K + K +ER+
Sbjct: 131 NREKEREEEVKAREKARVEKLVERE 155
Score = 41 (19.5 bits), Expect = 4.4e-15, Sum P(2) = 4.4e-15
Identities = 11/57 (19%), Positives = 29/57 (50%)
Query: 56 FVKKRKRKSIA-GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERD 111
F+ K++R+ +A + + + ++ + + E E V +G + K+ ++ +RD
Sbjct: 27 FLTKKQREELALKRRQDQISEQRVRREQLGRPEPETEDVSNGDTNRDKDRDRDRDRD 83
>POMBASE|SPCC63.11 [details] [associations]
symbol:prp28 "U5 snRNP-associated protein Prp28
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0000354
"cis assembly of pre-catalytic spliceosome" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPCC63.11
GO:GO:0005524 GO:GO:0005737 EMBL:CU329672 GenomeReviews:CU329672_GR
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0000354 KO:K12858 HOGENOM:HOG000268796
OMA:PIRNWKE OrthoDB:EOG4KPXK0 PIR:T41512 RefSeq:NP_587984.1
ProteinModelPortal:Q9Y7T7 STRING:Q9Y7T7 EnsemblFungi:SPCC63.11.1
GeneID:2538728 KEGG:spo:SPCC63.11 NextBio:20799913 Uniprot:Q9Y7T7
Length = 662
Score = 199 (75.1 bits), Expect = 7.1e-15, P = 7.1e-15
Identities = 51/148 (34%), Positives = 84/148 (56%)
Query: 60 RKRKSIAG---ETVEGFNVFKS-SKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERD-AV 113
RK KS +G ++G K+ + +L+ +K +K++ D +K L RD +
Sbjct: 171 RKAKSNSGLIQRLLQGTEQDKARAHELIQLQEKRAKKIDWDDVPWREKPLEAMKPRDWRI 230
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
++ YNI + G ++P+PLR + + G S +L+ L ++ YKEP+ IQR AIPVLL
Sbjct: 231 LKEDYNISIKGDDLPNPLRNWEEA----GLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQR 286
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ A TGSGKT AF+ P+++ + L
Sbjct: 287 KDLIGIAETGSGKTAAFIIPLIIAISKL 314
>ASPGD|ASPL0000051195 [details] [associations]
symbol:AN1634 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 EMBL:BN001307
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACD01000026 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:P09052
HOGENOM:HOG000268796 OMA:PIRNWKE RefSeq:XP_659238.1
ProteinModelPortal:Q5BCU6 EnsemblFungi:CADANIAT00008272
GeneID:2874876 KEGG:ani:AN1634.2 OrthoDB:EOG4KPXK0 Uniprot:Q5BCU6
Length = 782
Score = 198 (74.8 bits), Expect = 1.2e-14, P = 1.2e-14
Identities = 42/97 (43%), Positives = 60/97 (61%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G LL + +GYKE
Sbjct: 313 SEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSW----DESGLPKRLLELVDRVGYKE 368
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQR AIP+ + R+ A TGSGKT AFL P+L
Sbjct: 369 PTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLL 405
>CGD|CAL0001091 [details] [associations]
symbol:orf19.672 species:5476 "Candida albicans" [GO:0005682
"U5 snRNP" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008380 GO:GO:0006397
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116 RefSeq:XP_713805.1
RefSeq:XP_713845.1 ProteinModelPortal:Q59W52 GeneID:3644491
GeneID:3644552 KEGG:cal:CaO19.672 KEGG:cal:CaO19.8289
Uniprot:Q59W52
Length = 581
Score = 190 (71.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 46/121 (38%), Positives = 71/121 (58%)
Query: 83 VPAVDKEKEKVED----GPSKA---KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTF 134
VP ++ ++E ++D G K L + +RD +F++ YNI G N+P+PLR +
Sbjct: 112 VPLIEMDEE-IDDPLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYW 170
Query: 135 VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
+ S L+ +++LGY+EPT +QR +IP+ L R+ A TGSGKTLAFL P+
Sbjct: 171 NEGS----INDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPV 226
Query: 195 L 195
L
Sbjct: 227 L 227
>UNIPROTKB|Q59W52 [details] [associations]
symbol:PRP28 "Pre-mRNA-splicing ATP-dependent RNA helicase
PRP28" species:237561 "Candida albicans SC5314" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0001091
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008380
GO:GO:0006397 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 EMBL:AACQ01000117 EMBL:AACQ01000116
RefSeq:XP_713805.1 RefSeq:XP_713845.1 ProteinModelPortal:Q59W52
GeneID:3644491 GeneID:3644552 KEGG:cal:CaO19.672
KEGG:cal:CaO19.8289 Uniprot:Q59W52
Length = 581
Score = 190 (71.9 bits), Expect = 5.3e-14, P = 5.3e-14
Identities = 46/121 (38%), Positives = 71/121 (58%)
Query: 83 VPAVDKEKEKVED----GPSKA---KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTF 134
VP ++ ++E ++D G K L + +RD +F++ YNI G N+P+PLR +
Sbjct: 112 VPLIEMDEE-IDDPLFSGQESTHWTNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYW 170
Query: 135 VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
+ S L+ +++LGY+EPT +QR +IP+ L R+ A TGSGKTLAFL P+
Sbjct: 171 NEGS----INDKLVSIISQLGYEEPTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPV 226
Query: 195 L 195
L
Sbjct: 227 L 227
>UNIPROTKB|A3KN07 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0071013 "catalytic step 2 spliceosome" evidence=IEA]
[GO:0051607 "defense response to virus" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:DAAA02020056 EMBL:BC133465 IPI:IPI00840518
RefSeq:NP_001076071.1 UniGene:Bt.5258 SMR:A3KN07
Ensembl:ENSBTAT00000043510 GeneID:505276 KEGG:bta:505276
InParanoid:A3KN07 NextBio:20867058 Uniprot:A3KN07
Length = 622
Score = 190 (71.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 86 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 142
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 198
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 199 KGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>UNIPROTKB|E2R052 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] [GO:0051607 "defense response to virus" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0035458 "cellular
response to interferon-beta" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 CTD:51428 EMBL:AAEX03002959
RefSeq:XP_536417.2 ProteinModelPortal:E2R052
Ensembl:ENSCAFT00000025858 GeneID:479274 KEGG:cfa:479274
NextBio:20854482 Uniprot:E2R052
Length = 622
Score = 190 (71.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 86 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 142
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 198
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 199 KGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>UNIPROTKB|Q9UJV9 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005783 "endoplasmic reticulum" evidence=IEA] [GO:0035458
"cellular response to interferon-beta" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0051607 "defense response to virus"
evidence=IEA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0007275 "multicellular organismal development"
evidence=TAS] [GO:0006396 "RNA processing" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005783
GO:GO:0007275 GO:GO:0005524 GO:GO:0006915 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0003723 GO:GO:0035458 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CH471195
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 KO:K13116 EMBL:AF195417 EMBL:AK001255
EMBL:AK027768 EMBL:AK315491 EMBL:BC015476 EMBL:AL137455
EMBL:BX641072 IPI:IPI00007208 PIR:T46269 RefSeq:NP_057306.2
UniGene:Hs.484288 PDB:2P6N PDBsum:2P6N ProteinModelPortal:Q9UJV9
SMR:Q9UJV9 IntAct:Q9UJV9 MINT:MINT-3081244 STRING:Q9UJV9
PhosphoSite:Q9UJV9 DMDM:20532370 PaxDb:Q9UJV9 PeptideAtlas:Q9UJV9
PRIDE:Q9UJV9 DNASU:51428 Ensembl:ENST00000507955 GeneID:51428
KEGG:hsa:51428 UCSC:uc003mhn.3 CTD:51428 GeneCards:GC05M176938
HGNC:HGNC:18674 HPA:HPA017911 MIM:608170 neXtProt:NX_Q9UJV9
PharmGKB:PA134908862 HOGENOM:HOG000268792 InParanoid:Q9UJV9
OrthoDB:EOG4CVG6K PhylomeDB:Q9UJV9 ChiTaRS:DDX41
EvolutionaryTrace:Q9UJV9 GenomeRNAi:51428 NextBio:54987
ArrayExpress:Q9UJV9 Bgee:Q9UJV9 CleanEx:HS_DDX41
Genevestigator:Q9UJV9 GermOnline:ENSG00000183258 Uniprot:Q9UJV9
Length = 622
Score = 190 (71.9 bits), Expect = 5.9e-14, P = 5.9e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 86 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 142
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 198
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 199 KGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>UNIPROTKB|J3KNN5 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:KDQEERS HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000330503 Uniprot:J3KNN5
Length = 640
Score = 190 (71.9 bits), Expect = 6.2e-14, P = 6.2e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 104 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 160
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 161 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 216
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 217 KGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 259
>UNIPROTKB|J9NZF6 [details] [associations]
symbol:DDX41 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 GO:GO:0005524
GO:GO:0008270 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AAEX03002959
Ensembl:ENSCAFT00000042923 Uniprot:J9NZF6
Length = 649
Score = 190 (71.9 bits), Expect = 6.4e-14, P = 6.4e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 113 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 169
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 170 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 225
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 226 KGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 268
>MGI|MGI:1920185 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005681 "spliceosomal complex" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IDA] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035458 "cellular response to
interferon-beta" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0051607 "defense
response to virus" evidence=IMP] [GO:0071013 "catalytic step 2
spliceosome" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
MGI:MGI:1920185 GO:GO:0005783 GO:GO:0005524 GO:GO:0005634
GO:GO:0008380 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006397 GO:GO:0045944 GO:GO:0051607 GO:GO:0003723
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOVERGEN:HBG015893
KO:K13116 OMA:KDQEERS CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:AK156957 EMBL:BC011308 IPI:IPI00127071
RefSeq:NP_598820.2 UniGene:Mm.205045 ProteinModelPortal:Q91VN6
SMR:Q91VN6 IntAct:Q91VN6 STRING:Q91VN6 PhosphoSite:Q91VN6
PaxDb:Q91VN6 PRIDE:Q91VN6 Ensembl:ENSMUST00000021956 GeneID:72935
KEGG:mmu:72935 InParanoid:Q3U0E0 NextBio:337171 Bgee:Q91VN6
CleanEx:MM_DDX41 Genevestigator:Q91VN6
GermOnline:ENSMUSG00000021494 Uniprot:Q91VN6
Length = 622
Score = 189 (71.6 bits), Expect = 7.6e-14, P = 7.6e-14
Identities = 50/163 (30%), Positives = 83/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 86 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 142
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKK 198
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 199 KGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>UNIPROTKB|H0YI52 [details] [associations]
symbol:DDX23 "Probable ATP-dependent RNA helicase DDX23"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:17347 EMBL:AC117498
Ensembl:ENST00000552802 Uniprot:H0YI52
Length = 152
Score = 179 (68.1 bits), Expect = 7.9e-14, P = 7.9e-14
Identities = 39/84 (46%), Positives = 55/84 (65%)
Query: 118 YNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L +R+
Sbjct: 3 YSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQNRDII 58
Query: 178 ACAPTGSGKTLAFLCPMLMKLRVL 201
A TGSGKT AFL P+L+ + L
Sbjct: 59 GVAETGSGKTAAFLIPLLVWITTL 82
>TAIR|locus:2074899 [details] [associations]
symbol:AT3G09620 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0003723 EMBL:AC016661 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 IPI:IPI00534330
RefSeq:NP_187573.1 UniGene:At.53239 ProteinModelPortal:Q9SF41
SMR:Q9SF41 PaxDb:Q9SF41 PRIDE:Q9SF41 EnsemblPlants:AT3G09620.1
GeneID:820119 KEGG:ath:AT3G09620 KEGG:dosa:Os08t0154200-01
GeneFarm:1024 TAIR:At3g09620 InParanoid:Q9SF41 OMA:RGRYKVL
PhylomeDB:Q9SF41 ArrayExpress:Q9SF41 Genevestigator:Q9SF41
GermOnline:AT3G09620 Uniprot:Q9SF41
Length = 989
Score = 190 (71.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 58/176 (32%), Positives = 90/176 (51%)
Query: 30 KESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSK-QLVPAVDK 88
K+ N A ++GE +D + S K S+ + E K +K + + VD
Sbjct: 292 KKGFNKAALGRIIQGEDSDSD---YSEPKSDDDPSLDEDDEEFMKRVKKTKAEKLSLVDH 348
Query: 89 EKEKVEDGPSKAKKELNKQIER---DAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
K + E E+ K I R DAV +RK+ + V G +VP P++ + + G
Sbjct: 349 SKIEYEPFRKNFYIEV-KDISRMTQDAVNAYRKELELKVHGKDVPRPIQFW----HQTGL 403
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
S +L L +L Y++P PIQ QA+P+++S R+C A TGSGKTL F+ PML ++
Sbjct: 404 TSKILDTLKKLNYEKPMPIQAQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 459
>RGD|1311758 [details] [associations]
symbol:Ddx41 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 41"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005783 "endoplasmic
reticulum" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035458 "cellular response to interferon-beta"
evidence=IEA;ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0051607
"defense response to virus" evidence=IEA;ISO] [GO:0071013
"catalytic step 2 spliceosome" evidence=IEA;ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 RGD:1311758 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0051607
GO:GO:0035458 GO:GO:0071013 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:CH474032 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOVERGEN:HBG015893 KO:K13116 CTD:51428 HOGENOM:HOG000268792
OrthoDB:EOG4CVG6K EMBL:BC166825 IPI:IPI00565869
RefSeq:NP_001101516.1 UniGene:Rn.114971 SMR:B2RYL8
Ensembl:ENSRNOT00000018114 GeneID:314336 KEGG:rno:314336
UCSC:RGD:1311758 NextBio:667511 Genevestigator:B2RYL8
Uniprot:B2RYL8
Length = 622
Score = 187 (70.9 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 49/163 (30%), Positives = 81/163 (49%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 86 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 142
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + + L+ ER RKKY+I V G +P P+++F ++ + +LR L +
Sbjct: 143 KTSWTPPRYVLSMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK----LPAAILRGLKK 198
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 199 KGILHPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>RGD|1559513 [details] [associations]
symbol:RGD1559513 "similar to DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 RGD:1559513 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OrthoDB:EOG4CVG6K OMA:MEETETI
IPI:IPI00958592 Ensembl:ENSRNOT00000033492 UCSC:RGD:1559513
NextBio:667517 Uniprot:D4ADJ9
Length = 621
Score = 186 (70.5 bits), Expect = 1.6e-13, P = 1.6e-13
Identities = 47/152 (30%), Positives = 76/152 (50%)
Query: 45 EKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL 104
EK + K + ++ + I EG S K++ + + + ++ + + L
Sbjct: 95 EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPIKTSWTPPRYVL 152
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+ ER RKKY+I V G +P P+++F ++ + +LR L + G PTPIQ
Sbjct: 153 SMSEERHERVRKKYHILVEGDGIPPPIKSFKEMK----LPAAILRGLKKKGILHPTPIQI 208
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 209 QGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 240
>TAIR|locus:2065215 [details] [associations]
symbol:AT2G47330 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003723 EMBL:AC002337 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 UniGene:At.12226 UniGene:At.25582
HOGENOM:HOG000268793 KO:K12835 EMBL:AY057700 EMBL:AY124871
IPI:IPI00516775 PIR:H84913 RefSeq:NP_566099.1
ProteinModelPortal:O22907 SMR:O22907 STRING:O22907 PaxDb:O22907
PRIDE:O22907 EnsemblPlants:AT2G47330.1 GeneID:819346
KEGG:ath:AT2G47330 GeneFarm:942 TAIR:At2g47330 InParanoid:O22907
OMA:QEYANLM PhylomeDB:O22907 ProtClustDB:CLSN2688982
Genevestigator:O22907 GermOnline:AT2G47330 Uniprot:O22907
Length = 760
Score = 157 (60.3 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 33/85 (38%), Positives = 53/85 (62%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I VSG +V P++TF G S ++ + + Y++PT IQ QA+P++LS
Sbjct: 210 YRQRLGIRVSGFDVHRPVKTFEDC----GFSSQIMSAIKKQAYEKPTAIQCQALPIVLSG 265
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ PM++ +
Sbjct: 266 RDVIGIAKTGSGKTAAFVLPMIVHI 290
Score = 53 (23.7 bits), Expect = 2.6e-13, Sum P(2) = 2.6e-13
Identities = 30/131 (22%), Positives = 56/131 (42%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKT--DPEKAMVSFVK 58
+ + S+ F ++ +V +R +N E +L D+ ++E E+ D E+ +
Sbjct: 13 INRQTSYSFERSQAPQRLYVPPSSRGGDNSEDADL-DNIDYMENEEAEEDIEEGGSAAAS 71
Query: 59 KRKRKSIAGETVEGF--NVFKSSKQLVPAVDKEK-EKVEDGPS-------KAKKELNKQI 108
+ I + ++ F + + K P KEK E+ +D KAKK+L +
Sbjct: 72 GGEVDEI--DPLDAFMEGIHQEMKSAPPPKPKEKLERYKDDDDDPVESYLKAKKDLGLTL 129
Query: 109 ERDAVFRKKYN 119
DA+ YN
Sbjct: 130 AADAL-NAGYN 139
>TAIR|locus:2037416 [details] [associations]
symbol:RCF1 "regulator of CBF gene expression 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA;ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005524 GO:GO:0003723 EMBL:AC007369
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
HOGENOM:HOG000007229 EMBL:BT002030 IPI:IPI00537100 PIR:H86341
RefSeq:NP_173516.1 UniGene:At.41680 UniGene:At.48212
ProteinModelPortal:Q8H0U8 SMR:Q8H0U8 PaxDb:Q8H0U8 PRIDE:Q8H0U8
EnsemblPlants:AT1G20920.1 GeneID:838685 KEGG:ath:AT1G20920
KEGG:dosa:Os08t0154225-00 KEGG:dosa:Os08t0159900-01 GeneFarm:1021
TAIR:At1g20920 InParanoid:Q8H0U8 OMA:QIHSDIR PhylomeDB:Q8H0U8
ProtClustDB:CLSN2679447 Genevestigator:Q8H0U8 GermOnline:AT1G20920
Uniprot:Q8H0U8
Length = 1166
Score = 187 (70.9 bits), Expect = 3.1e-13, P = 3.1e-13
Identities = 50/165 (30%), Positives = 86/165 (52%)
Query: 42 VEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSK-QLVPAVDKEKEKVEDGPSKA 100
++GE +D + S K S+ + E K +K + + VD K +E P +
Sbjct: 437 IQGEDSDSD---YSEPKNDDDPSLDEDDEEFMKRVKKTKAEKLSLVDHSK--IEYEPFRK 491
Query: 101 K-----KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
K++++ + + +RK+ + V G +VP P +K + G S +L + +L
Sbjct: 492 NFYIEVKDISRMTQEEVNTYRKELELKVHGKDVPRP----IKFWHQTGLTSKILDTMKKL 547
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Y++P PIQ QA+P+++S R+C A TGSGKTL F+ PML ++
Sbjct: 548 NYEKPMPIQTQALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 592
>DICTYBASE|DDB_G0277857 [details] [associations]
symbol:helB2 "putative U5 small nuclear
ribonucleoprotein" species:44689 "Dictyostelium discoideum"
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005681 "spliceosomal complex" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0000375 "RNA splicing, via transesterification reactions"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0008380 "RNA splicing" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0277857 GO:GO:0005524 GO:GO:0005737
GenomeReviews:CM000152_GR EMBL:AAFI02000023 GO:GO:0006397
GO:GO:0005681 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12858 GO:GO:0000375 HSSP:P09052 EMBL:X81824
RefSeq:XP_642321.1 ProteinModelPortal:Q54Y81 STRING:Q54Y81
EnsemblProtists:DDB0219950 GeneID:8621527 KEGG:ddi:DDB_G0277857
OMA:DRYRDND Uniprot:Q54Y81
Length = 834
Score = 185 (70.2 bits), Expect = 3.2e-13, P = 3.2e-13
Identities = 40/98 (40%), Positives = 62/98 (63%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+KK L +RD +F++ +NI G P+P+RT+ + S E +L + +LGY++
Sbjct: 380 SKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTWQE--SNLPRE--ILEAIRQLGYEK 435
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQ Q+IP+ L+ R+ A TGSGKT AF+ PML+
Sbjct: 436 PSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLI 473
>UNIPROTKB|Q5F485 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008104 "protein
localization" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
EMBL:AJ851415 IPI:IPI00576529 RefSeq:NP_001026097.1
UniGene:Gga.5156 ProteinModelPortal:Q5F485 STRING:Q5F485
GeneID:419959 KEGG:gga:419959 CTD:11325 HOGENOM:HOG000268793
HOVERGEN:HBG081425 InParanoid:Q5F485 KO:K12835 OrthoDB:EOG47WNN9
NextBio:20822943 Uniprot:Q5F485
Length = 944
Score = 185 (70.2 bits), Expect = 3.8e-13, P = 3.8e-13
Identities = 52/182 (28%), Positives = 89/182 (48%)
Query: 27 KENKESENLADDFSFVEGEKTD----PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
KE K ++ + DD + ++ E V++ + ++ ++ +G + S K +
Sbjct: 139 KEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDS-DGNPIAPSKKII 197
Query: 83 VPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVK 136
P + ++E P + +E+ + V R K N+ VSGA P P +F
Sbjct: 198 DPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSF-- 255
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+RFG + L+ + + Y +PTPIQ Q +PV +S R+ A TGSGKT AF+ PML+
Sbjct: 256 --ARFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 197 KL 198
+
Sbjct: 314 HI 315
>UNIPROTKB|F1NAH6 [details] [associations]
symbol:LOC100859810 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0035458 "cellular response to interferon-beta" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051607 "defense response
to virus" evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005783 GO:GO:0005524
GO:GO:0003677 GO:GO:0008270 GO:GO:0045944 GO:GO:0035458
GO:GO:0071013 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KDQEERS EMBL:AADN02028748
EMBL:AADN02028749 EMBL:AADN02068652 IPI:IPI00576331
Ensembl:ENSGALT00000004794 Uniprot:F1NAH6
Length = 607
Score = 182 (69.1 bits), Expect = 4.1e-13, P = 4.1e-13
Identities = 49/163 (30%), Positives = 82/163 (50%)
Query: 34 NLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV 93
+L D ++ EK + K + ++ + I EG S K++ + + + +
Sbjct: 82 SLLDQHQHLK-EKAEARKESAKEKQLKEEEKILESVAEG-RALMSVKEMAKGITYD-DPI 138
Query: 94 EDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ + L R RKKY+I V G +P P+++F ++ +F + +LR L +
Sbjct: 139 KTSWRAPRYILAMSEARHNRVRKKYHILVEGEGIPPPIKSFKEM--KF--PAAILRGLKK 194
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G ++PTPIQ Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 195 KGIQQPTPIQIQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 237
>UNIPROTKB|Q90ZF6 [details] [associations]
symbol:olvas "VASA" species:8090 "Oryzias latipes"
[GO:0043186 "P granule" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 HSSP:Q58083 HOVERGEN:HBG015893 EMBL:AB063484
RefSeq:NP_001098146.1 UniGene:Ola.181 ProteinModelPortal:Q90ZF6
SMR:Q90ZF6 GeneID:100049226 CTD:100049226 Uniprot:Q90ZF6
Length = 617
Score = 180 (68.4 bits), Expect = 7.0e-13, P = 7.0e-13
Identities = 45/132 (34%), Positives = 71/132 (53%)
Query: 85 AVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVSGANVPSPLRTFVKLSS 139
A D E+ KV P ++ + + + KY+ + VSG N+P+ + TF +
Sbjct: 129 AADPERPKVTYIPPSLPEDEDSIFSHYKMGINFDKYDDILVDVSGTNLPAAIMTFEEAKL 188
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
CES L N++ GY +PTP+Q+ +P++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 189 ---CES-LENNISRSGYVKPTPVQKYGLPIISAGRDLMACAQTGSGKTAAFLLPILQQLM 244
Query: 200 VLFIPFDYFCEL 211
+ F E+
Sbjct: 245 ADGVAASRFSEI 256
>TAIR|locus:2119176 [details] [associations]
symbol:AT4G33370 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0046872 GO:GO:0008270 EMBL:AL035678 EMBL:AL161583
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13116 HOGENOM:HOG000268792 ProtClustDB:CLSN2685494
IPI:IPI00545227 PIR:T05988 RefSeq:NP_195063.1 UniGene:At.65448
ProteinModelPortal:Q9SZB4 SMR:Q9SZB4 PaxDb:Q9SZB4 PRIDE:Q9SZB4
EnsemblPlants:AT4G33370.1 GeneID:829474 KEGG:ath:AT4G33370
GeneFarm:1022 TAIR:At4g33370 InParanoid:Q9SZB4 OMA:MEETETI
PhylomeDB:Q9SZB4 Genevestigator:Q9SZB4 GermOnline:AT4G33370
Uniprot:Q9SZB4
Length = 542
Score = 179 (68.1 bits), Expect = 7.1e-13, P = 7.1e-13
Identities = 41/100 (41%), Positives = 63/100 (63%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
P +K KQ++ + RK+++I V+G ++P P++ F+ + +F S LLR L + G
Sbjct: 65 PLHVRKMSTKQMD---LIRKQWHITVNGEDIPPPIKNFMDM--KF--PSPLLRMLKDKGI 117
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQ Q +PV+LS R+ A TGSGKTL F+ PM++
Sbjct: 118 MHPTPIQVQGLPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
>GENEDB_PFALCIPARUM|PFE0925c [details] [associations]
symbol:PFE0925c "snrnp protein, putative"
species:5833 "Plasmodium falciparum" [GO:0020011 "apicoplast"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL844504 InterPro:IPR014014 PROSITE:PS51195 KO:K12858
HSSP:Q58083 HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 169 (64.5 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 40/109 (36%), Positives = 63/109 (57%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + +RD +FR+ I++ G VP P+R + + + + LL+ + + Y++
Sbjct: 665 SQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESN----LSNDLLKAIKKAKYEK 720
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L P Y
Sbjct: 721 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQL-PPLTY 768
Score = 40 (19.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 8 LFAGVSFDKKK-FVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRK 63
+FA +S ++K F+T R ++ K+ EN EK + + +K+K++
Sbjct: 266 IFANLSNNEKPVFLTKKEREEKKKKMENDKQKKMISSKEKEEEGEGEGEGERKKKKE 322
>UNIPROTKB|Q8I0W7 [details] [associations]
symbol:PFE0925c "Snrnp protein, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0020011 "apicoplast" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 KO:K12858 HSSP:Q58083
HOGENOM:HOG000268796 RefSeq:XP_001351742.1
ProteinModelPortal:Q8I0W7 EnsemblProtists:PFE0925c:mRNA
GeneID:813000 KEGG:pfa:PFE0925c EuPathDB:PlasmoDB:PF3D7_0518500
ProtClustDB:CLSZ2514918 Uniprot:Q8I0W7
Length = 1123
Score = 169 (64.5 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 40/109 (36%), Positives = 63/109 (57%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + +RD +FR+ I++ G VP P+R + + + + LL+ + + Y++
Sbjct: 665 SQKSREEMTDRDWRIFREDNEIYIKGGVVPPPIRKWEESN----LSNDLLKAIKKAKYEK 720
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L P Y
Sbjct: 721 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQL-PPLTY 768
Score = 40 (19.1 bits), Expect = 8.5e-13, Sum P(2) = 8.5e-13
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 8 LFAGVSFDKKK-FVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRK 63
+FA +S ++K F+T R ++ K+ EN EK + + +K+K++
Sbjct: 266 IFANLSNNEKPVFLTKKEREEKKKKMENDKQKKMISSKEKEEEGEGEGEGERKKKKE 322
>UNIPROTKB|F1P0H1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00610000086076 EMBL:AADN02056764
IPI:IPI00819332 Ensembl:ENSGALT00000040437 ArrayExpress:F1P0H1
Uniprot:F1P0H1
Length = 703
Score = 180 (68.4 bits), Expect = 8.6e-13, P = 8.6e-13
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 27 KENKESENLADDFSFVEGEKTD----PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
KE K ++ + DD + ++ E V++ + ++ ++ +G + S K +
Sbjct: 134 KEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDS-DGNPIAPSKKII 192
Query: 83 VPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVK 136
P + ++E P + +E+ + V R K N+ VSGA P P +F
Sbjct: 193 DPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSF-- 250
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ FG + L+ + + Y +PTPIQ Q +PV +S R+ A TGSGKT AF+ PML+
Sbjct: 251 --AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLI 308
Query: 197 KL 198
+
Sbjct: 309 HI 310
>UNIPROTKB|Q3MSQ8 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:45623 "Pelophylax lessonae" [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0030154 GO:GO:0048477 GO:GO:0007283 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071546
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AJ841700
ProteinModelPortal:Q3MSQ8 SMR:Q3MSQ8 Uniprot:Q3MSQ8
Length = 724
Score = 179 (68.1 bits), Expect = 1.1e-12, P = 1.1e-12
Identities = 53/166 (31%), Positives = 88/166 (53%)
Query: 38 DFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGP 97
D SF ++D + + + + I E+ +G F+ S+Q P V + P
Sbjct: 195 DSSFSGDRESDRGRGFGRGGFRGRNEDIGVESGKGQEGFERSEQ-GPRVTY----IPPPP 249
Query: 98 SKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
+ ++ K + F KY+ + VSG++VP + TF + + C+S L +N+ +
Sbjct: 250 PAEESDIFKHYQTGINF-DKYDDIVVEVSGSDVPPAILTFEEANL---CDS-LAKNVCKS 304
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
GY + TPIQ+ +IP++++ R+ ACA TGSGKT AFL P+L L V
Sbjct: 305 GYVKLTPIQKHSIPIIVAGRDLMACAQTGSGKTAAFLLPILAHLMV 350
>UNIPROTKB|F1NJ40 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008104 "protein localization" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 IPI:IPI00576529 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AADN02056764
Ensembl:ENSGALT00000000811 ArrayExpress:F1NJ40 Uniprot:F1NJ40
Length = 946
Score = 180 (68.4 bits), Expect = 1.3e-12, P = 1.3e-12
Identities = 51/182 (28%), Positives = 88/182 (48%)
Query: 27 KENKESENLADDFSFVEGEKTD----PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
KE K ++ + DD + ++ E V++ + ++ ++ +G + S K +
Sbjct: 141 KEKKNAKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDS-DGNPIAPSKKII 199
Query: 83 VPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVK 136
P + ++E P + +E+ + V R K N+ VSGA P P +F
Sbjct: 200 DPLPPIDHSEIEYPPFEKNFYDEHEEITSLTPQQVVELRHKLNLRVSGAAPPRPGSSF-- 257
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ FG + L+ + + Y +PTPIQ Q +PV +S R+ A TGSGKT AF+ PML+
Sbjct: 258 --AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVAMSGRDMIGIAKTGSGKTAAFIWPMLI 315
Query: 197 KL 198
+
Sbjct: 316 HI 317
>UNIPROTKB|D6RJA6 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524 GO:GO:0005730
EMBL:CH471062 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
UniGene:Hs.406549 HGNC:HGNC:18681 ChiTaRS:DDX46 EMBL:AC006077
EMBL:AC010301 IPI:IPI00967303 SMR:D6RJA6 Ensembl:ENST00000507392
Uniprot:D6RJA6
Length = 471
Score = 174 (66.3 bits), Expect = 1.9e-12, P = 1.9e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 233 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 287
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 288 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 343
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 344 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 382
>ZFIN|ZDB-GENE-990415-272 [details] [associations]
symbol:vasa "vasa homolog" species:7955 "Danio
rerio" [GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008406 "gonad development" evidence=IEP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-990415-272 GO:GO:0005524 GO:GO:0008406
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HSSP:Q58083 HOGENOM:HOG000268804 HOVERGEN:HBG015893 KO:K13982
EMBL:AB005147 IPI:IPI00495861 RefSeq:NP_571132.1 UniGene:Dr.559
ProteinModelPortal:O42107 SMR:O42107 STRING:O42107 PRIDE:O42107
GeneID:30263 KEGG:dre:30263 CTD:30263 InParanoid:O42107
NextBio:20806710 ArrayExpress:O42107 Bgee:O42107 Uniprot:O42107
Length = 716
Score = 175 (66.7 bits), Expect = 3.0e-12, P = 3.0e-12
Identities = 36/92 (39%), Positives = 56/92 (60%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 265 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 320
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 321 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEI 352
>TAIR|locus:2041549 [details] [associations]
symbol:AT2G42520 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005777 "peroxisome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0005777 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AC007087 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 ProtClustDB:CLSN2683925
EMBL:BT004111 IPI:IPI00545939 PIR:H84854 RefSeq:NP_181780.1
UniGene:At.43442 ProteinModelPortal:Q84W89 SMR:Q84W89 IntAct:Q84W89
PaxDb:Q84W89 PRIDE:Q84W89 EnsemblPlants:AT2G42520.1 GeneID:818852
KEGG:ath:AT2G42520 GeneFarm:1013 TAIR:At2g42520 InParanoid:Q84W89
OMA:ADSENTG PhylomeDB:Q84W89 Genevestigator:Q84W89
GermOnline:AT2G42520 Uniprot:Q84W89
Length = 633
Score = 174 (66.3 bits), Expect = 3.2e-12, P = 3.2e-12
Identities = 44/107 (41%), Positives = 61/107 (57%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
E + E P+ +++ N I DA + I SG NVP P+ TF ++ G E+ L
Sbjct: 119 ENDDSEPEPAFTEQD-NTVINFDAY--EDIPIETSGDNVPPPVNTFAEID--LG-EALNL 172
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
N+ Y +PTP+QR AIP+LL R+ ACA TGSGKT AF P++
Sbjct: 173 -NIRRCKYVKPTPVQRHAIPILLEGRDLMACAQTGSGKTAAFCFPII 218
>UNIPROTKB|Q5R7D1 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9601 "Pongo abelii" [GO:0005634 "nucleus" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISS] [GO:0008104 "protein
localization" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
CTD:11325 HOVERGEN:HBG081425 KO:K12835 EMBL:CR860187
RefSeq:NP_001126368.1 UniGene:Pab.3212 ProteinModelPortal:Q5R7D1
GeneID:100173349 KEGG:pon:100173349 Uniprot:Q5R7D1
Length = 942
Score = 176 (67.0 bits), Expect = 3.5e-12, P = 3.5e-12
Identities = 50/182 (27%), Positives = 88/182 (48%)
Query: 27 KENKESENLADDFSFVEGEKTD----PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
KE K + + DD + ++T E V++ + ++ ++ +G + + K +
Sbjct: 139 KERKNVKGIRDDIEEEDDQETYFRYMAENPTAGVVQEEEEDNLEYDS-DGNPIAPTKKII 197
Query: 83 VPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVK 136
P + +++ P + +E+ + + R K N+ VSGA P P +F
Sbjct: 198 DPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGSSF-- 255
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+ PML+
Sbjct: 256 --AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 197 KL 198
+
Sbjct: 314 HI 315
>FB|FBgn0030631 [details] [associations]
symbol:CG6227 species:7227 "Drosophila melanogaster"
[GO:0003729 "mRNA binding" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0005681 "spliceosomal complex"
evidence=ISS] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000381
"regulation of alternative mRNA splicing, via spliceosome"
evidence=IMP] [GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:AE014298 GO:GO:0005681 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
GO:GO:0000381 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
HSSP:Q58083 GeneTree:ENSGT00610000086076 KO:K12811 OMA:RGRYKVL
EMBL:FJ764847 EMBL:FJ764848 EMBL:FJ764851 EMBL:FJ764853
EMBL:FJ764855 EMBL:FJ764858 FlyBase:FBgn0030631 EMBL:BT016090
RefSeq:NP_573020.2 UniGene:Dm.168 SMR:Q9VXW2 IntAct:Q9VXW2
EnsemblMetazoa:FBtr0074011 GeneID:32464 KEGG:dme:Dmel_CG6227
UCSC:CG6227-RA InParanoid:Q9VXW2 GenomeRNAi:32464 NextBio:778600
Uniprot:Q9VXW2
Length = 1224
Score = 156 (60.0 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 33/75 (44%), Positives = 45/75 (60%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+ + G + L LG+++PTPIQ QAIP ++S R+
Sbjct: 498 IQVKGKGCPKPIKTWAQC----GVSKKEMEVLRRLGFEKPTPIQCQAIPAIMSGRDLIGI 553
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKTLAF+ PM
Sbjct: 554 AKTGSGKTLAFILPM 568
Score = 48 (22.0 bits), Expect = 3.6e-12, Sum P(2) = 3.6e-12
Identities = 11/42 (26%), Positives = 23/42 (54%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVP 128
++E+EK ++ + ++E +K ERD K+ + + A P
Sbjct: 122 EREREKEKEREKEKERERDKDRERDRQREKESDSRRAAAAAP 163
Score = 45 (20.9 bits), Expect = 7.3e-12, Sum P(2) = 7.3e-12
Identities = 8/25 (32%), Positives = 16/25 (64%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD 111
D+++EK + + ++E K+ ERD
Sbjct: 116 DRQREKEREREKEKEREKEKERERD 140
Score = 38 (18.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 6/25 (24%), Positives = 17/25 (68%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD 111
D+++++ ++ + +KE K+ ER+
Sbjct: 114 DRDRQREKEREREKEKEREKEKERE 138
Score = 38 (18.4 bits), Expect = 3.9e-11, Sum P(2) = 3.9e-11
Identities = 6/26 (23%), Positives = 17/26 (65%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERD 111
+DK++++ D + +KE ++ E++
Sbjct: 105 LDKDRDRDRDRDRQREKEREREKEKE 130
Score = 37 (18.1 bits), Expect = 4.9e-11, Sum P(2) = 4.9e-11
Identities = 6/25 (24%), Positives = 16/25 (64%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD 111
D+++++ D + ++E K+ ER+
Sbjct: 108 DRDRDRDRDRQREKEREREKEKERE 132
Score = 35 (17.4 bits), Expect = 7.9e-11, Sum P(2) = 7.9e-11
Identities = 6/25 (24%), Positives = 15/25 (60%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD 111
D+E+++ + ++E ++ ERD
Sbjct: 10 DRERDRERERERDRERERDRDRERD 34
>MGI|MGI:1919297 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1919297
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0016607 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:AL604045 HSSP:P09052
CTD:11325 HOGENOM:HOG000268793 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 OMA:QGVNNTA ChiTaRS:DDX42 EMBL:AK007805
EMBL:AK049311 EMBL:AK169816 EMBL:AK171730 EMBL:BC043036
IPI:IPI00329839 IPI:IPI00830514 RefSeq:NP_082350.3 UniGene:Mm.41367
ProteinModelPortal:Q810A7 SMR:Q810A7 IntAct:Q810A7 STRING:Q810A7
PhosphoSite:Q810A7 PaxDb:Q810A7 PRIDE:Q810A7
Ensembl:ENSMUST00000021046 GeneID:72047 KEGG:mmu:72047
UCSC:uc007lyk.2 UCSC:uc007lyl.2 GeneTree:ENSGT00610000086076
InParanoid:Q810A7 NextBio:335308 Bgee:Q810A7 CleanEx:MM_DDX42
Genevestigator:Q810A7 Uniprot:Q810A7
Length = 929
Score = 175 (66.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF-------NVFKSS 79
KE K + + DD E+ D ++A ++ + + E E N S
Sbjct: 139 KERKNVKGIRDDI-----EEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPS 193
Query: 80 KQLV---PAVDKEK---EKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K+++ P +D + E +E+ + + R K N+ VSGA P P
Sbjct: 194 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS 253
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+F + FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+
Sbjct: 254 SF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIW 309
Query: 193 PMLMKL 198
PML+ +
Sbjct: 310 PMLIHI 315
>RGD|1304909 [details] [associations]
symbol:Ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 42"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0005737 "cytoplasm"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008104 "protein localization" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:1304909
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0008104
GO:GO:0003676 EMBL:CH473948 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
CTD:11325 KO:K12835 OrthoDB:EOG47WNN9 GeneTree:ENSGT00610000086076
IPI:IPI00361283 RefSeq:NP_001100529.1 UniGene:Rn.154550
Ensembl:ENSRNOT00000013046 GeneID:303607 KEGG:rno:303607
UCSC:RGD:1304909 NextBio:651732 Uniprot:D4A031
Length = 929
Score = 175 (66.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF-------NVFKSS 79
KE K + + DD E+ D ++A ++ + + E E N S
Sbjct: 139 KERKNVKGIRDDI-----EEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPS 193
Query: 80 KQLV---PAVDKEK---EKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K+++ P +D + E +E+ + + R K N+ VSGA P P
Sbjct: 194 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS 253
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+F + FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+
Sbjct: 254 SF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIW 309
Query: 193 PMLMKL 198
PML+ +
Sbjct: 310 PMLIHI 315
>UNIPROTKB|E2RFF1 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AAEX03006359
Ensembl:ENSCAFT00000020366 Uniprot:E2RFF1
Length = 933
Score = 175 (66.7 bits), Expect = 4.4e-12, P = 4.4e-12
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF-------NVFKSS 79
KE K + + DD E+ D ++A ++ + + E E N S
Sbjct: 139 KERKNVKGIRDDI-----EEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPS 193
Query: 80 KQLV---PAVDKEK---EKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K+++ P +D + E +E+ + + R K N+ VSGA P P
Sbjct: 194 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS 253
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+F + FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+
Sbjct: 254 SF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIW 309
Query: 193 PMLMKL 198
PML+ +
Sbjct: 310 PMLIHI 315
>UNIPROTKB|E1BJD2 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:DAAA02049325 IPI:IPI00701280
Ensembl:ENSBTAT00000028046 Uniprot:E1BJD2
Length = 946
Score = 175 (66.7 bits), Expect = 4.5e-12, P = 4.5e-12
Identities = 54/186 (29%), Positives = 85/186 (45%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF-------NVFKSS 79
KE K + + DD E+ D ++A ++ + + E E N S
Sbjct: 139 KERKNVKGIRDDI-----EEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPS 193
Query: 80 KQLV---PAVDKEK---EKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K+++ P +D + E +E+ + + R K N+ VSGA P P
Sbjct: 194 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS 253
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+F + FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+
Sbjct: 254 SF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIW 309
Query: 193 PMLMKL 198
PML+ +
Sbjct: 310 PMLIHI 315
>POMBASE|SPBP8B7.16c [details] [associations]
symbol:dbp2 "ATP-dependent RNA helicase Dbp2"
species:4896 "Schizosaccharomyces pombe" [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=ISO] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0005524 "ATP binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006364 "rRNA processing" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPBP8B7.16c
GO:GO:0005829 GO:GO:0005524 GO:GO:0005730 GO:GO:0000184
EMBL:CU329671 GenomeReviews:CU329671_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY OrthoDB:EOG47SWP6
EMBL:X52648 EMBL:L11574 PIR:T40810 RefSeq:NP_596523.1
ProteinModelPortal:P24782 IntAct:P24782 STRING:P24782 PRIDE:P24782
EnsemblFungi:SPBP8B7.16c.1 GeneID:2541383 KEGG:spo:SPBP8B7.16c
NextBio:20802492 Uniprot:P24782
Length = 550
Score = 171 (65.3 bits), Expect = 5.3e-12, P = 5.3e-12
Identities = 37/95 (38%), Positives = 58/95 (61%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RK+ I V G NVP P+ TF + G +Y+L+ + +LG++ PTPIQ+QA P+ +S
Sbjct: 104 YRKEKEIVVHGLNVPKPVTTFEEA----GFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSG 159
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
R+ + TGSGKTL++ P ++ + L P D
Sbjct: 160 RDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGD 194
>DICTYBASE|DDB_G0287361 [details] [associations]
symbol:ddx41 "DEAD box protein abstrakt"
species:44689 "Dictyostelium discoideum" [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0006396 "RNA processing" evidence=ISS] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 dictyBase:DDB_G0287361
GO:GO:0005524 GO:GO:0005634 GO:GO:0046872 GO:GO:0008270
GenomeReviews:CM000154_GR GO:GO:0003723 GO:GO:0006396
EMBL:AAFI02000100 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P09052 RefSeq:XP_637262.1 ProteinModelPortal:Q54KG1 SMR:Q54KG1
IntAct:Q54KG1 EnsemblProtists:DDB0233452 GeneID:8626092
KEGG:ddi:DDB_G0287361 KO:K13116 OMA:DICRYLC Uniprot:Q54KG1
Length = 671
Score = 172 (65.6 bits), Expect = 5.7e-12, P = 5.7e-12
Identities = 55/189 (29%), Positives = 88/189 (46%)
Query: 17 KKFVTDFARFKENKESENLADDFSFVEGE----KTDPEKAMVSFVKKRKRKSIAGETVEG 72
+KF + + +ENK L + +E + + + +K+ KR + E +
Sbjct: 102 QKF--EMIKKQENKTQRELQQGGTIIENDVNSSNNNNNNGEENKIKEEKRLDM--EESDI 157
Query: 73 FNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI-ERDAV----FRKKYNIHVSGANV 127
K+ K LV D+ K+ + K + I ERD R + NI G ++
Sbjct: 158 LKSLKTFKPLVSVKDRAKDVIYTDSIKTNWRAPRYILERDEKDHQKVRDQLNIITDGEDI 217
Query: 128 PSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKT 187
P P+ TF ++ ++ L E G K+P+PIQ Q +PV+LS R+ A TGSGKT
Sbjct: 218 PPPITTFKEMK----IPKPVIDVLLEKGIKKPSPIQVQGLPVILSGRDMIGIAYTGSGKT 273
Query: 188 LAFLCPMLM 196
L F PM++
Sbjct: 274 LVFTLPMVL 282
>UNIPROTKB|Q7L014 [details] [associations]
symbol:DDX46 "Probable ATP-dependent RNA helicase DDX46"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006397 "mRNA
processing" evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA]
[GO:0015030 "Cajal body" evidence=IEA] [GO:0016607 "nuclear speck"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0008380 GO:GO:0016607 GO:GO:0006397 GO:GO:0003723
GO:GO:0015030 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K12811 EMBL:AF106680 EMBL:AB018344 EMBL:BC012304 EMBL:BK000565
IPI:IPI00329791 RefSeq:NP_055644.2 UniGene:Hs.406549
ProteinModelPortal:Q7L014 SMR:Q7L014 IntAct:Q7L014
MINT:MINT-3002486 STRING:Q7L014 PhosphoSite:Q7L014 DMDM:116241326
PaxDb:Q7L014 PeptideAtlas:Q7L014 PRIDE:Q7L014
Ensembl:ENST00000354283 Ensembl:ENST00000452510 GeneID:9879
KEGG:hsa:9879 UCSC:uc003kzw.3 CTD:9879 GeneCards:GC05P134094
HGNC:HGNC:18681 HPA:HPA036554 neXtProt:NX_Q7L014
PharmGKB:PA134894452 HOGENOM:HOG000007229 HOVERGEN:HBG081426
InParanoid:Q7L014 OrthoDB:EOG441Q9T ChiTaRS:DDX46 GenomeRNAi:9879
NextBio:37233 PMAP-CutDB:Q7L014 ArrayExpress:Q7L014 Bgee:Q7L014
CleanEx:HS_DDX46 Genevestigator:Q7L014 GermOnline:ENSG00000145833
Uniprot:Q7L014
Length = 1031
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>UNIPROTKB|F1MX40 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:DAAA02020348
EMBL:DAAA02020349 IPI:IPI00703383 Ensembl:ENSBTAT00000028682
Uniprot:F1MX40
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 53/159 (33%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQ-IERDAVFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K +E VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSLEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>UNIPROTKB|F1PK90 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AAEX03007786
Ensembl:ENSCAFT00000001619 Uniprot:F1PK90
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>UNIPROTKB|I3LR20 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005730 "nucleolus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:FP312757
Ensembl:ENSSSCT00000027801 Uniprot:I3LR20
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>MGI|MGI:1920895 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006397 "mRNA processing"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008380 "RNA splicing" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1920895
GO:GO:0005524 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T ChiTaRS:DDX46 EMBL:AK129220 EMBL:BC026492
EMBL:BC092240 IPI:IPI00468896 IPI:IPI00660556 RefSeq:NP_666087.3
UniGene:Mm.202725 ProteinModelPortal:Q569Z5 SMR:Q569Z5
STRING:Q569Z5 PhosphoSite:Q569Z5 PaxDb:Q569Z5 PRIDE:Q569Z5
Ensembl:ENSMUST00000172272 GeneID:212880 KEGG:mmu:212880
UCSC:uc011yzx.1 InParanoid:Q569Z5 OMA:IEEENKF NextBio:373723
Bgee:Q569Z5 CleanEx:MM_DDX46 Genevestigator:Q569Z5
GermOnline:ENSMUSG00000021500 Uniprot:Q569Z5
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>RGD|708480 [details] [associations]
symbol:Ddx46 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 46"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005730 "nucleolus" evidence=IEA;ISO]
[GO:0006397 "mRNA processing" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0015030 "Cajal body" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 RGD:708480
GO:GO:0005524 GO:GO:0005634 GO:GO:0005730 GO:GO:0008380
GO:GO:0016607 GO:GO:0006397 GO:GO:0003723 GO:GO:0015030
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 KO:K12811 CTD:9879
HOGENOM:HOG000007229 HOVERGEN:HBG081426 OrthoDB:EOG441Q9T
EMBL:U25746 EMBL:BC107590 IPI:IPI00208266 PIR:A57514
RefSeq:NP_620798.1 UniGene:Rn.3436 ProteinModelPortal:Q62780
STRING:Q62780 PhosphoSite:Q62780 PRIDE:Q62780
Ensembl:ENSRNOT00000029885 GeneID:245957 KEGG:rno:245957
UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>UNIPROTKB|Q62780 [details] [associations]
symbol:Ddx46 "Probable ATP-dependent RNA helicase DDX46"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:708480 GO:GO:0005524
GO:GO:0005634 GO:GO:0005730 GO:GO:0008380 GO:GO:0016607
GO:GO:0006397 GO:GO:0003723 GO:GO:0015030 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
KO:K12811 CTD:9879 HOGENOM:HOG000007229 HOVERGEN:HBG081426
OrthoDB:EOG441Q9T EMBL:U25746 EMBL:BC107590 IPI:IPI00208266
PIR:A57514 RefSeq:NP_620798.1 UniGene:Rn.3436
ProteinModelPortal:Q62780 STRING:Q62780 PhosphoSite:Q62780
PRIDE:Q62780 Ensembl:ENSRNOT00000029885 GeneID:245957
KEGG:rno:245957 UCSC:RGD:708480 InParanoid:Q62780 NextBio:623205
ArrayExpress:Q62780 Genevestigator:Q62780
GermOnline:ENSRNOG00000021637 Uniprot:Q62780
Length = 1032
Score = 174 (66.3 bits), Expect = 6.4e-12, P = 6.4e-12
Identities = 52/159 (32%), Positives = 82/159 (51%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 281 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 335
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + VFR + I V G P P++++V+ G +L +L + G
Sbjct: 336 YVEVPELAKMSQEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHG 391
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 392 YEKPTPIQTQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 430
>ZFIN|ZDB-GENE-050706-53 [details] [associations]
symbol:ddx42 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
42" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-050706-53 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
EMBL:BX324157 IPI:IPI00774497 Ensembl:ENSDART00000076209
Uniprot:E7F401
Length = 910
Score = 172 (65.6 bits), Expect = 8.9e-12, P = 8.9e-12
Identities = 35/84 (41%), Positives = 51/84 (60%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
R+K N+ VSGA P P +F + FG + L+ + + Y +PTPIQ Q +P+ LS R
Sbjct: 240 RRKLNLKVSGAAPPKPATSF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSGR 295
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ A TGSGKT AF+ P+L+ +
Sbjct: 296 DAIGIAKTGSGKTAAFIWPILVHI 319
>UNIPROTKB|Q86XP3 [details] [associations]
symbol:DDX42 "ATP-dependent RNA helicase DDX42"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] [GO:0016607 "nuclear speck" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0008104 "protein
localization" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AF083255 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0008104 GO:GO:0016607 GO:GO:0003723
EMBL:CH471109 GO:GO:0015030 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 CTD:11325 HOVERGEN:HBG081425 KO:K12835
OrthoDB:EOG47WNN9 EMBL:AB036090 EMBL:AK292908 EMBL:AC015651
EMBL:BC008208 EMBL:BC015505 EMBL:BC078667 EMBL:BC093081
EMBL:AL050096 EMBL:BK000566 IPI:IPI00409671 IPI:IPI00829889
PIR:T08745 RefSeq:NP_031398.2 RefSeq:NP_987095.1 UniGene:Hs.702010
ProteinModelPortal:Q86XP3 SMR:Q86XP3 IntAct:Q86XP3
MINT:MINT-1427725 STRING:Q86XP3 PhosphoSite:Q86XP3 DMDM:74750541
PaxDb:Q86XP3 PRIDE:Q86XP3 Ensembl:ENST00000359353
Ensembl:ENST00000389924 Ensembl:ENST00000457800
Ensembl:ENST00000578681 Ensembl:ENST00000583590 GeneID:11325
KEGG:hsa:11325 UCSC:uc002jbu.3 GeneCards:GC17P061851
HGNC:HGNC:18676 HPA:HPA023447 HPA:HPA023571 HPA:HPA025941
MIM:613369 neXtProt:NX_Q86XP3 PharmGKB:PA134875761
InParanoid:Q86XP3 OMA:QGVNNTA ChiTaRS:DDX42 GenomeRNAi:11325
NextBio:43019 ArrayExpress:Q86XP3 Bgee:Q86XP3 CleanEx:HS_DDX42
Genevestigator:Q86XP3 Uniprot:Q86XP3
Length = 938
Score = 172 (65.6 bits), Expect = 9.2e-12, P = 9.2e-12
Identities = 53/186 (28%), Positives = 85/186 (45%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF-------NVFKSS 79
KE K + + DD E+ D ++A ++ + + E E N +
Sbjct: 139 KERKNVKGIRDDI-----EEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDSDGNPIAPT 193
Query: 80 KQLV---PAVDKEK---EKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K+++ P +D + E +E+ + + R K N+ VSGA P P
Sbjct: 194 KKIIDPLPPIDHSEIDYPPFEKNFYNEHEEITNLTPQQLIDLRHKLNLRVSGAAPPRPGS 253
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+F + FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+
Sbjct: 254 SF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIW 309
Query: 193 PMLMKL 198
PML+ +
Sbjct: 310 PMLIHI 315
>TAIR|locus:2176192 [details] [associations]
symbol:AT5G51280 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0000741 "karyogamy"
evidence=RCA] [GO:0009560 "embryo sac egg cell differentiation"
evidence=RCA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0046872
GO:GO:0008270 GO:GO:0003723 Gene3D:4.10.60.10 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AB023044 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K13116
OMA:DICRYLC HOGENOM:HOG000268792 EMBL:AK226380 IPI:IPI00530020
RefSeq:NP_199941.1 UniGene:At.29686 ProteinModelPortal:Q9LU46
SMR:Q9LU46 PaxDb:Q9LU46 PRIDE:Q9LU46 DNASU:835202
EnsemblPlants:AT5G51280.1 GeneID:835202 KEGG:ath:AT5G51280
GeneFarm:1011 TAIR:At5g51280 InParanoid:Q9LU46 PhylomeDB:Q9LU46
ProtClustDB:CLSN2685494 Genevestigator:Q9LU46 GermOnline:AT5G51280
Uniprot:Q9LU46
Length = 591
Score = 169 (64.5 bits), Expect = 9.9e-12, P = 9.9e-12
Identities = 41/100 (41%), Positives = 62/100 (62%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
P +K +KQ RD + RK+++I V+G ++P P++ F + +F +L L E G
Sbjct: 114 PLHIRKMSSKQ--RDLI-RKQWHIIVNGDDIPPPIKNFKDM--KF--PRPVLDTLKEKGI 166
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+PTPIQ Q +PV+L+ R+ A TGSGKTL F+ PM+M
Sbjct: 167 VQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIM 206
>ZFIN|ZDB-GENE-030131-1927 [details] [associations]
symbol:ddx41 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 41" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR001878
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490
ZFIN:ZDB-GENE-030131-1927 GO:GO:0005524 GO:GO:0008270 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
EMBL:CABZ01072950 EMBL:CABZ01072951 EMBL:CABZ01072952
IPI:IPI00961669 Ensembl:ENSDART00000061987 Bgee:F1QQ09
Uniprot:F1QQ09
Length = 473
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 36/82 (43%), Positives = 52/82 (63%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
RKKY+I V G +P+P+++F ++ +F +L+ L + G PTPIQ Q IP +LS R
Sbjct: 20 RKKYHILVEGEGIPAPIKSFREM--KF--PQAILKGLKKKGIVHPTPIQIQGIPTILSGR 75
Query: 175 ECFACAPTGSGKTLAFLCPMLM 196
+ A TGSGKTL F P++M
Sbjct: 76 DMIGIAFTGSGKTLVFTLPIIM 97
>MGI|MGI:2136689 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2136689 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 HOVERGEN:HBG100512 CTD:54555
OrthoDB:EOG4C87SC EMBL:BC099554 IPI:IPI00354271
RefSeq:NP_001020093.2 UniGene:Mm.388127 UniGene:Mm.440659
ProteinModelPortal:Q4FZF3 SMR:Q4FZF3 PhosphoSite:Q4FZF3
PRIDE:Q4FZF3 Ensembl:ENSMUST00000008004 GeneID:234374
KEGG:mmu:234374 UCSC:uc009lzu.1 InParanoid:Q4FZF3 NextBio:382139
Bgee:Q4FZF3 CleanEx:MM_DDX49 Genevestigator:Q4FZF3
GermOnline:ENSMUSG00000057788 Uniprot:Q4FZF3
Length = 480
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G S+L+ +LG K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AEIGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
P+ FC
Sbjct: 65 SE--DPYGIFC 73
>UNIPROTKB|Q9Y6V7 [details] [associations]
symbol:DDX49 "Probable ATP-dependent RNA helicase DDX49"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC002985 KO:K14778 HOGENOM:HOG000268802 OMA:EVRTVEQ
HOVERGEN:HBG100512 EMBL:AK223294 EMBL:BC002674 IPI:IPI00003739
RefSeq:NP_061943.2 UniGene:Hs.143187 ProteinModelPortal:Q9Y6V7
SMR:Q9Y6V7 IntAct:Q9Y6V7 STRING:Q9Y6V7 PhosphoSite:Q9Y6V7
DMDM:74753527 PaxDb:Q9Y6V7 PRIDE:Q9Y6V7 DNASU:54555
Ensembl:ENST00000247003 GeneID:54555 KEGG:hsa:54555 UCSC:uc002nkq.2
CTD:54555 GeneCards:GC19P019030 HGNC:HGNC:18684 neXtProt:NX_Q9Y6V7
PharmGKB:PA134956171 InParanoid:Q9Y6V7 OrthoDB:EOG4C87SC
PhylomeDB:Q9Y6V7 GenomeRNAi:54555 NextBio:57032 ArrayExpress:Q9Y6V7
Bgee:Q9Y6V7 CleanEx:HS_DDX49 Genevestigator:Q9Y6V7
GermOnline:ENSG00000105671 Uniprot:Q9Y6V7
Length = 483
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G S+L+ +LG K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
P+ FC
Sbjct: 65 SE--DPYGIFC 73
>UNIPROTKB|F1S7D9 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K14778 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 CTD:54555 EMBL:CU640483
RefSeq:XP_003123587.1 UniGene:Ssc.79767 Ensembl:ENSSSCT00000025399
GeneID:100526038 KEGG:ssc:100526038 Uniprot:F1S7D9
Length = 483
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G S+L+ +LG K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
P+ FC
Sbjct: 65 SE--DPYGIFC 73
>UNIPROTKB|E2RBM7 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
OMA:EVRTVEQ GeneTree:ENSGT00670000098028 CTD:54555
EMBL:AAEX03012274 RefSeq:XP_541930.1 ProteinModelPortal:E2RBM7
Ensembl:ENSCAFT00000023054 GeneID:484814 KEGG:cfa:484814
NextBio:20858886 Uniprot:E2RBM7
Length = 488
Score = 167 (63.8 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G S+L+ +LG K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AELGLSSWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
P+ FC
Sbjct: 65 SE--DPYGIFC 73
>UNIPROTKB|F1N0P2 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:DAAA02019036 IPI:IPI00709252
UniGene:Bt.61505 Ensembl:ENSBTAT00000056136 OMA:PLEPKEY
Uniprot:F1N0P2
Length = 392
Score = 165 (63.1 bits), Expect = 1.2e-11, P = 1.2e-11
Identities = 31/71 (43%), Positives = 43/71 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G S+L+ ++G K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AELGLSSWLVEQCRQMGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
P+ FC
Sbjct: 65 SE--DPYGIFC 73
>UNIPROTKB|H0Y960 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HGNC:HGNC:18700 EMBL:AC016632 Ensembl:ENST00000503129
Uniprot:H0Y960
Length = 305
Score = 162 (62.1 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 126 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 185
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 186 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 241
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 242 SGKTAAFLLPIL 253
>UNIPROTKB|Q91372 [details] [associations]
symbol:ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:8355 "Xenopus laevis" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005634 "nucleus" evidence=IDA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0045495 "pole plasm" evidence=IDA] [GO:0071546 "pi-body"
evidence=ISS] [GO:0071547 "piP-body" evidence=ISS] [GO:0032019
"mitochondrial cloud" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0007275
GO:GO:0005524 GO:GO:0005635 GO:GO:0048477 GO:GO:0007283
GO:GO:0003676 GO:GO:0007281 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HSSP:P09052 HOVERGEN:HBG015893 CTD:54514 KO:K13982
GO:GO:0071547 EMBL:AF046043 PIR:I51235 RefSeq:NP_001081728.1
UniGene:Xl.256 ProteinModelPortal:Q91372 SMR:Q91372 GeneID:398019
KEGG:xla:398019 Xenbase:XB-GENE-1016814 Uniprot:Q91372
Length = 700
Score = 169 (64.5 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 39/102 (38%), Positives = 62/102 (60%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
P + + +Q + F KY+ + V+G +VP + TF + + CE+ L RN+A
Sbjct: 237 PPDGEDNIFRQYQSGINF-DKYDEILVDVTGKDVPPAILTFEEANL---CET-LRRNVAR 291
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
GY + TP+Q+ +IP++++ R+ ACA TGSGKT AFL P+L
Sbjct: 292 AGYVKLTPVQKHSIPIIMAGRDLMACAQTGSGKTAAFLLPIL 333
>UNIPROTKB|F1SLL4 [details] [associations]
symbol:LOC100626422 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:CU929824
Ensembl:ENSSSCT00000018419 OMA:DEESIFA Uniprot:F1SLL4
Length = 232
Score = 158 (60.7 bits), Expect = 1.3e-11, P = 1.3e-11
Identities = 33/76 (43%), Positives = 49/76 (64%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L R+ AC
Sbjct: 117 VEVSGHEAPPAILTFEEANL---CQT-LNSNIAKAGYTKLTPVQKYSIPIILGGRDLMAC 172
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 173 AQTGSGKTAAFLLPIL 188
>TAIR|locus:2081061 [details] [associations]
symbol:AT3G06480 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0005773
"vacuole" evidence=IDA] [GO:0006635 "fatty acid beta-oxidation"
evidence=RCA] [GO:0016558 "protein import into peroxisome matrix"
evidence=RCA] InterPro:IPR000629 InterPro:IPR001202
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
Pfam:PF00397 PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020
PROSITE:PS51194 SMART:SM00456 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005773 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0000184 GO:GO:0003723 EMBL:AC011623 Gene3D:2.20.70.10
SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12823 IPI:IPI00528334 RefSeq:NP_187299.1
UniGene:At.27592 ProteinModelPortal:Q9SQV1 SMR:Q9SQV1 PaxDb:Q9SQV1
PRIDE:Q9SQV1 EnsemblPlants:AT3G06480.1 GeneID:819825
KEGG:ath:AT3G06480 GeneFarm:1016 TAIR:At3g06480
HOGENOM:HOG000154116 InParanoid:Q9SQV1 OMA:GMRENSF PhylomeDB:Q9SQV1
ProtClustDB:CLSN2915418 Genevestigator:Q9SQV1 GermOnline:AT3G06480
Uniprot:Q9SQV1
Length = 1088
Score = 171 (65.3 bits), Expect = 1.4e-11, P = 1.4e-11
Identities = 37/87 (42%), Positives = 51/87 (58%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
++RK++ + +G N+P+P TF SS G +LR L G+ PTPIQ Q P+ L
Sbjct: 416 IYRKQHEVTTTGENIPAPYITFE--SS--GLPPEILRELLSAGFPSPTPIQAQTWPIALQ 471
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + LR
Sbjct: 472 SRDIVAIAKTGSGKTLGYLIPAFILLR 498
>TAIR|locus:2828586 [details] [associations]
symbol:AT3G02065 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0009507
"chloroplast" evidence=ISM] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0046872 GO:GO:0003723 EMBL:AC011664 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000006599 OMA:VTRPIID EMBL:AY065172
EMBL:BT001184 IPI:IPI00516794 IPI:IPI00525607 RefSeq:NP_001030621.1
RefSeq:NP_850499.1 RefSeq:NP_974208.1 UniGene:At.41185
UniGene:At.47211 ProteinModelPortal:Q3EBD3 SMR:Q3EBD3 IntAct:Q3EBD3
PaxDb:Q3EBD3 PRIDE:Q3EBD3 EnsemblPlants:AT3G02065.2
EnsemblPlants:AT3G02065.3 GeneID:821155 KEGG:ath:AT3G02065
GeneFarm:1017 TAIR:At3g02065 InParanoid:Q3EBD3 PhylomeDB:Q3EBD3
ProtClustDB:PLN00206 Genevestigator:Q3EBD3 Uniprot:Q3EBD3
Length = 505
Score = 166 (63.5 bits), Expect = 1.6e-11, P = 1.6e-11
Identities = 41/90 (45%), Positives = 51/90 (56%)
Query: 111 DA-VFRKKYNIHVSGAN--VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
DA + R+K +IHV G VP P+ TF G LL NL GY PTPIQ QAI
Sbjct: 86 DAQLLRRKLDIHVQGQGSAVPPPVLTFTSC----GLPPKLLLNLETAGYDFPTPIQMQAI 141
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
P L+ + A A TGSGKT +FL P++ +
Sbjct: 142 PAALTGKSLLASADTGSGKTASFLVPIISR 171
>TAIR|locus:2162022 [details] [associations]
symbol:AT5G63120 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0000184 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
EMBL:AB008265 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 EMBL:AY060589
EMBL:BT000610 EMBL:AK226611 EMBL:AJ010476 IPI:IPI00532778
IPI:IPI00537266 PIR:T51349 RefSeq:NP_568964.1 RefSeq:NP_974985.1
UniGene:At.27361 ProteinModelPortal:Q8W4R3 SMR:Q8W4R3 PaxDb:Q8W4R3
PRIDE:Q8W4R3 EnsemblPlants:AT5G63120.2 GeneID:836432
KEGG:ath:AT5G63120 GeneFarm:979 TAIR:At5g63120 InParanoid:Q8W4R3
OMA:FTHANAK PhylomeDB:Q8W4R3 ProtClustDB:CLSN2690069
Genevestigator:Q8W4R3 GermOnline:AT5G63120 Uniprot:Q8W4R3
Length = 591
Score = 166 (63.5 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 38/89 (42%), Positives = 55/89 (61%)
Query: 109 ERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E+D A++R + +I V G +VP P++ F + F +L +A+LG+ EPTPIQ Q
Sbjct: 141 EQDVAMYRTERDISVEGRDVPKPMKMFQ--DANF--PDNILEAIAKLGFTEPTPIQAQGW 196
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+ L R+ A TGSGKTLA+L P L+
Sbjct: 197 PMALKGRDLIGIAETGSGKTLAYLLPALV 225
>UNIPROTKB|E1BSC0 [details] [associations]
symbol:DDX46 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005730
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF EMBL:AADN02028359
IPI:IPI00577115 Ensembl:ENSGALT00000010339 Uniprot:E1BSC0
Length = 1031
Score = 169 (64.5 bits), Expect = 2.2e-11, P = 2.2e-11
Identities = 51/159 (32%), Positives = 81/159 (50%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK- 101
+GE + ++ + + + + + + G+ K K L P VD K +E P +
Sbjct: 280 KGELMENDQDAMEYSSEEEEVDLQ-TALTGYQT-KQRKLLEP-VDHGK--IEYEPFRKNF 334
Query: 102 ----KELNKQIERDA-VFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
EL K + + V+R + I V G P P++T+V+ G +L L + G
Sbjct: 335 YVEVPELAKMTQEEVNVYRLEMEGITVKGKGCPKPIKTWVQC----GISMKILTALKKHG 390
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
Y++PTPIQ QAIP +++ R+ A TGSGKT+AFL PM
Sbjct: 391 YEKPTPIQSQAIPAIMNGRDLIGIAKTGSGKTIAFLLPM 429
>TAIR|locus:2076436 [details] [associations]
symbol:AT3G58570 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0009507 "chloroplast" evidence=ISM]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
EMBL:AL137082 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 KO:K11594 OMA:KYERGGN EMBL:AY049285
EMBL:BT002731 EMBL:AY088132 IPI:IPI00518094 PIR:T45677
RefSeq:NP_191416.1 UniGene:At.831 ProteinModelPortal:Q9M2F9
SMR:Q9M2F9 STRING:Q9M2F9 PaxDb:Q9M2F9 PRIDE:Q9M2F9
EnsemblPlants:AT3G58570.1 GeneID:825026 KEGG:ath:AT3G58570
GeneFarm:1031 TAIR:At3g58570 InParanoid:Q9M2F9 PhylomeDB:Q9M2F9
ProtClustDB:CLSN2915471 Genevestigator:Q9M2F9 GermOnline:AT3G58570
Uniprot:Q9M2F9
Length = 646
Score = 166 (63.5 bits), Expect = 2.4e-11, P = 2.4e-11
Identities = 43/104 (41%), Positives = 59/104 (56%)
Query: 95 DGPSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNL 151
DG A +N+Q E + + Y I SG NVP P+ TF ++ G E+ L N+
Sbjct: 109 DG--NADPAVNEQ-ENTVINFEAYEDIPIETSGDNVPPPVNTFAEID--LG-EALNL-NI 161
Query: 152 AELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
Y +PTP+QR AIP+L + R+ ACA TGSGKT AF P++
Sbjct: 162 QRCKYVKPTPVQRNAIPILAAGRDLMACAQTGSGKTAAFCFPII 205
>WB|WBGene00006888 [details] [associations]
symbol:vbh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0032502 "developmental process"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] [GO:0042006 "masculinization of hermaphroditic
germ-line" evidence=IMP] [GO:0042127 "regulation of cell
proliferation" evidence=IMP] [GO:0040020 "regulation of meiosis"
evidence=IMP] [GO:0007281 "germ cell development" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040010 GO:GO:0003676 GO:GO:0042127 GO:GO:0040035
GO:GO:0007281 GO:GO:0040020 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GO:GO:0043186 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN EMBL:FO081614
GO:GO:0042006 RefSeq:NP_001021793.1 UniGene:Cel.16952
ProteinModelPortal:Q65XX1 SMR:Q65XX1 IntAct:Q65XX1
MINT:MINT-6669731 STRING:Q65XX1 PaxDb:Q65XX1 PRIDE:Q65XX1
EnsemblMetazoa:Y54E10A.9c.1 EnsemblMetazoa:Y54E10A.9c.2
GeneID:171888 KEGG:cel:CELE_Y54E10A.9 UCSC:Y54E10A.9a CTD:171888
WormBase:Y54E10A.9c InParanoid:Q65XX1 NextBio:873115
ArrayExpress:Q65XX1 Uniprot:Q65XX1
Length = 660
Score = 165 (63.1 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 43/130 (33%), Positives = 69/130 (53%)
Query: 72 GFNVFKSSKQLVPAVDKEKEKVEDGPSK-AKKELNKQIERDAVFRKKYNI--HVSGANVP 128
G+N F S E + P++ ++ L + + F K NI VSG +VP
Sbjct: 76 GYNNFADSGNGFNNNGAESNQWGGAPAEYSESNLFHRTDSGINFDKYENIPVEVSGDSVP 135
Query: 129 SPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTL 188
+ + F + FG ++ N+ GY +PTP+Q+ +IP LL++R+ +CA TGSGKT
Sbjct: 136 AAIEHFNEAG--FG--PAVMENVNRSGYSKPTPVQKHSIPTLLANRDLMSCAQTGSGKTA 191
Query: 189 AFLCPMLMKL 198
AFL P++ +
Sbjct: 192 AFLLPIIQHI 201
>FB|FBgn0036104 [details] [associations]
symbol:CG6418 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:AE014296 GO:GO:0006200
GO:GO:0003676 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q58083 KO:K12835 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:AY061400 RefSeq:NP_648413.1
UniGene:Dm.922 SMR:Q9VTC1 IntAct:Q9VTC1 MINT:MINT-311970
STRING:Q9VTC1 EnsemblMetazoa:FBtr0076274 GeneID:39218
KEGG:dme:Dmel_CG6418 UCSC:CG6418-RB FlyBase:FBgn0036104
InParanoid:Q9VTC1 OrthoDB:EOG4KKWJ0 ChiTaRS:CG6418 GenomeRNAi:39218
NextBio:812543 Uniprot:Q9VTC1
Length = 791
Score = 166 (63.5 bits), Expect = 3.2e-11, P = 3.2e-11
Identities = 34/82 (41%), Positives = 49/82 (59%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
R+ + V+G + P P+ +F FG + L++ + + Y +PTPIQ QA+P LS R
Sbjct: 252 RRTLGVKVTGPSPPKPVTSF----GHFGFDEQLIKAVRKAEYTQPTPIQAQAVPTALSGR 307
Query: 175 ECFACAPTGSGKTLAFLCPMLM 196
+ A TGSGKT AF+ PMLM
Sbjct: 308 DIIGIAKTGSGKTAAFIWPMLM 329
>TAIR|locus:2076351 [details] [associations]
symbol:AT3G58510 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA;ISS] [GO:0005730 "nucleolus" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] [GO:0005777 "peroxisome"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0005730
GO:GO:0005777 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 EMBL:AL137082 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K11594
EMBL:AY088091 EMBL:AY062446 EMBL:AY114637 EMBL:AJ010463
IPI:IPI00521485 PIR:T45671 PIR:T51742 RefSeq:NP_001030884.1
RefSeq:NP_567067.1 RefSeq:NP_974455.1 UniGene:At.22801
UniGene:At.70259 ProteinModelPortal:Q8LA13 SMR:Q8LA13 IntAct:Q8LA13
STRING:Q8LA13 PaxDb:Q8LA13 PRIDE:Q8LA13 EnsemblPlants:AT3G58510.1
EnsemblPlants:AT3G58510.2 EnsemblPlants:AT3G58510.3 GeneID:825020
KEGG:ath:AT3G58510 GeneFarm:927 TAIR:At3g58510 InParanoid:Q8LA13
OMA:FCAPDEA PhylomeDB:Q8LA13 ProtClustDB:CLSN2683925
Genevestigator:Q8LA13 GermOnline:AT3G58510 Uniprot:Q8LA13
Length = 612
Score = 164 (62.8 bits), Expect = 3.6e-11, P = 3.6e-11
Identities = 34/76 (44%), Positives = 46/76 (60%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ SG +VP P+ TF + G L N+ Y PTP+QR AIP+LL++R+ AC
Sbjct: 139 VETSGGDVPPPVNTFADID--LG--DALNLNIRRCKYVRPTPVQRHAIPILLAERDLMAC 194
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AF P++
Sbjct: 195 AQTGSGKTAAFCFPII 210
>UNIPROTKB|D6RCM4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HGNC:HGNC:18700 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RCM4 SMR:D6RCM4 Ensembl:ENST00000506511
ArrayExpress:D6RCM4 Bgee:D6RCM4 Uniprot:D6RCM4
Length = 518
Score = 162 (62.1 bits), Expect = 4.5e-11, P = 4.5e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 200 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 259
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 260 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 316 SGKTAAFLLPIL 327
>FB|FBgn0015331 [details] [associations]
symbol:abs "abstrakt" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=NAS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0030010
"establishment of cell polarity" evidence=NAS] [GO:0007399 "nervous
system development" evidence=NAS] [GO:0005634 "nucleus"
evidence=NAS] [GO:0009653 "anatomical structure morphogenesis"
evidence=NAS] [GO:0006915 "apoptotic process" evidence=NAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0071013 "catalytic step 2 spliceosome"
evidence=IDA] [GO:0000398 "mRNA splicing, via spliceosome"
evidence=IC] [GO:0071011 "precatalytic spliceosome" evidence=IDA]
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158
PROSITE:PS51194 SMART:SM00343 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0046872 GO:GO:0008270 GO:GO:0003723
GO:GO:0004386 GO:GO:0071011 GO:GO:0000398 GO:GO:0071013
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K13116 EMBL:AF212866 EMBL:AF187729
EMBL:AY051752 RefSeq:NP_524220.1 UniGene:Dm.3300
ProteinModelPortal:Q9V3C0 SMR:Q9V3C0 DIP:DIP-21861N IntAct:Q9V3C0
MINT:MINT-341079 STRING:Q9V3C0 PaxDb:Q9V3C0 PRIDE:Q9V3C0
EnsemblMetazoa:FBtr0078967 GeneID:40530 KEGG:dme:Dmel_CG14637
UCSC:CG14637-RA CTD:40530 FlyBase:FBgn0015331 InParanoid:Q9V3C0
OMA:KDQEERS OrthoDB:EOG4KWH7Z PhylomeDB:Q9V3C0 GenomeRNAi:40530
NextBio:819209 Bgee:Q9V3C0 GermOnline:CG14637 Uniprot:Q9V3C0
Length = 619
Score = 163 (62.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 49/150 (32%), Positives = 78/150 (52%)
Query: 50 EKAMVSFVKK--RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKE-KVEDGPSKAKKELNK 106
E +S V+K R+ + I E++ +L + E+ K P + +E+++
Sbjct: 95 EAKKLSAVEKQLREEEKIM-ESIAQQKALMGVAELAKGIQYEQPIKTAWKPPRYIREMSE 153
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
+ ER+AV R + I V G P+R+F ++ G +L LA G K PTPIQ Q
Sbjct: 154 E-EREAV-RHELRILVEGETPSPPIRSFREMKFPKG----ILNGLAAKGIKNPTPIQVQG 207
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+P +L+ R+ A TGSGKTL F+ P++M
Sbjct: 208 LPTVLAGRDLIGIAFTGSGKTLVFVLPVIM 237
>RGD|1311124 [details] [associations]
symbol:Ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 49"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1311124 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:EVRTVEQ
GeneTree:ENSGT00670000098028 IPI:IPI00362462 PRIDE:E9PTF0
Ensembl:ENSRNOT00000004891 UCSC:RGD:1311124 Uniprot:E9PTF0
Length = 480
Score = 161 (61.7 bits), Expect = 5.0e-11, P = 5.0e-11
Identities = 31/65 (47%), Positives = 41/65 (63%)
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIP 204
S+L+ +LG K+PTP+Q IP +L R+C CA TGSGKT AF+ P+L KL P
Sbjct: 11 SWLVEQCRQLGLKQPTPVQLGCIPAILEGRDCLGCAKTGSGKTAAFVLPILQKLSE--DP 68
Query: 205 FDYFC 209
+ FC
Sbjct: 69 YGIFC 73
>CGD|CAL0003204 [details] [associations]
symbol:DBP2 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0003204 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AACQ01000245
EMBL:AACQ01000246 RefSeq:XP_710694.1 RefSeq:XP_710708.1
ProteinModelPortal:Q59LU0 PRIDE:Q59LU0 GeneID:3647692
GeneID:3647705 KEGG:cal:CaO19.171 KEGG:cal:CaO19.7804 KO:K12823
Uniprot:Q59LU0
Length = 562
Score = 162 (62.1 bits), Expect = 5.2e-11, P = 5.2e-11
Identities = 38/110 (34%), Positives = 61/110 (55%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK + P A + ++ IE+ FRK+ + V G ++P P+ TF G Y+L
Sbjct: 88 EKNFYSEHPDVAARS-DRDIEQ---FRKENEMTVKGHDIPHPITTF----DEAGFPDYVL 139
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ + + G+ +PTPIQ Q P+ LS R+ A TGSGKTL++ P ++ +
Sbjct: 140 QEVKDQGFPKPTPIQCQGWPMALSGRDMIGIAATGSGKTLSYCLPSIVHI 189
>ZFIN|ZDB-GENE-980526-150 [details] [associations]
symbol:pl10 "pl10" species:7955 "Danio rerio"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-980526-150 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 KO:K11594 HOVERGEN:HBG015893
EMBL:BC059794 IPI:IPI00483337 RefSeq:NP_571016.2 UniGene:Dr.75779
ProteinModelPortal:Q6PBB2 SMR:Q6PBB2 GeneID:30116 KEGG:dre:30116
CTD:30116 InParanoid:Q6PBB2 NextBio:20806595 ArrayExpress:Q6PBB2
Uniprot:Q6PBB2
Length = 688
Score = 163 (62.4 bits), Expect = 5.5e-11, P = 5.5e-11
Identities = 62/204 (30%), Positives = 93/204 (45%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFK-ENKESE--NLADDFSFVE-GEKTDPEKAMVSF 56
M G+SF G + F F +NKE+ N+ D ++ G ++D K+ SF
Sbjct: 73 MNGGSSFAGRGPIRSDRGGRGGFRGFGYDNKEAGGWNVPKDNAYNSFGGRSDRGKS--SF 130
Query: 57 VKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
R S GF +S+ + D++ K + + EL F K
Sbjct: 131 FNDRGSSSRGRYERGGFGGGGNSRWVEECRDEDWSKPLPPNERLEHELFSGSNTGINFEK 190
Query: 117 KYNIHV--SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
+I V +G N P P+ F L G ++ N+ Y PTP+Q+ AIP++ S R
Sbjct: 191 YDDIPVEATGHNGPQPIDRFHDLE--MG--EIIMGNINLSRYTRPTPVQKHAIPIIKSKR 246
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ ACA TGSGKT AFL P+L ++
Sbjct: 247 DLMACAQTGSGKTAAFLLPVLSQI 270
>UNIPROTKB|Q9KS53 [details] [associations]
symbol:VC1407 "ATP-dependent RNA helicase RhlE"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 159 (61.0 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>TIGR_CMR|VC_1407 [details] [associations]
symbol:VC_1407 "ATP-dependent RNA helicase RhlE"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GenomeReviews:AE003852_GR GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 OMA:FRNLCAI HSSP:P10081 EMBL:AE004219 PIR:D82203
RefSeq:NP_231050.1 ProteinModelPortal:Q9KS53 DNASU:2614039
GeneID:2614039 KEGG:vch:VC1407 PATRIC:20081876
ProtClustDB:CLSK874358 Uniprot:Q9KS53
Length = 397
Score = 159 (61.0 bits), Expect = 5.7e-11, P = 5.7e-11
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>UNIPROTKB|Q4R5S7 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9541 "Macaca fascicularis" [GO:0005737 "cytoplasm"
evidence=ISS] [GO:0071546 "pi-body" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOVERGEN:HBG015893 GO:GO:0071547 EMBL:AB169466
ProteinModelPortal:Q4R5S7 SMR:Q4R5S7 Uniprot:Q4R5S7
Length = 725
Score = 163 (62.4 bits), Expect = 6.0e-11, P = 6.0e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 221 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGISFDKYDTILVEVS 280
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 281 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 337 SGKTAAFLLPIL 348
>CGD|CAL0003464 [details] [associations]
symbol:orf19.5991 species:5476 "Candida albicans" [GO:0005730
"nucleolus" evidence=IEA] [GO:0030687 "preribosome, large subunit
precursor" evidence=IEA] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IEA] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
CGD:CAL0003464 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AACQ01000003
EMBL:AACQ01000004 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_723054.1
RefSeq:XP_723201.1 STRING:Q5ANB2 GeneID:3635229 GeneID:3635325
KEGG:cal:CaO19.13412 KEGG:cal:CaO19.5991 KO:K14808 Uniprot:Q5ANB2
Length = 908
Score = 164 (62.8 bits), Expect = 6.3e-11, P = 6.3e-11
Identities = 38/116 (32%), Positives = 60/116 (51%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
P K K + PS + + D K N + N P+ + + FG
Sbjct: 48 PPKKKSKPNPQAFPSLELSDNEGNNDDDDDDDSKINSYFINNN-PTAKKAKAGSFASFGL 106
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++L N+A+ GYK+PTPIQR+ IP+++ R+ A TGSGKT AF+ P++ +L+
Sbjct: 107 TKFILANIAKKGYKQPTPIQRKTIPLIMEGRDVVGMARTGSGKTAAFVLPLIERLK 162
>DICTYBASE|DDB_G0281925 [details] [associations]
symbol:DDB_G0281925 "DEAD/DEAH box helicase"
species:44689 "Dictyostelium discoideum" [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0281925 GO:GO:0005524 GO:GO:0003676
EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 RefSeq:XP_640502.1
ProteinModelPortal:Q54T87 PRIDE:Q54T87 EnsemblProtists:DDB0304645
GeneID:8623317 KEGG:ddi:DDB_G0281925 InParanoid:Q54T87 OMA:SWGNRDN
Uniprot:Q54T87
Length = 586
Score = 161 (61.7 bits), Expect = 7.1e-11, P = 7.1e-11
Identities = 50/174 (28%), Positives = 92/174 (52%)
Query: 32 SENLADDFSF-VEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEK 90
S+ +D S V+ E++ +K +S + +S + ++ E + KS K+ + +K+
Sbjct: 6 SKRKTEDESLEVKVEQSSSKKLKMSKRDESSDESSSSDS-EVESKSKSIKKSSKSEEKKS 64
Query: 91 EKVEDGPSKAKKE-LNKQIERDAV-----FRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
EK + K+E + ++ + D V +RKK+N+ + G + P+P + F F
Sbjct: 65 EKKSSSSKEDKEEEVKEETKEDIVLSPTEWRKKHNVLIEGKSQPNPFQKFTDYE--F--- 119
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ +++ + G+ PT IQ Q+ P++L + A TGSGKTLAFL P L+K+
Sbjct: 120 PRMFQHIFQ-GFTAPTVIQGQSWPIILGGNDLVGLAATGSGKTLAFLLPALLKI 172
>MGI|MGI:102670 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0007141 "male meiosis I" evidence=IMP]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=ISO] [GO:0030529 "ribonucleoprotein complex" evidence=IDA]
[GO:0032880 "regulation of protein localization" evidence=IMP]
[GO:0033391 "chromatoid body" evidence=ISO;IDA] [GO:0044464 "cell
part" evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0071546 "pi-body" evidence=IDA] [GO:0071547
"piP-body" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:102670 GO:GO:0007275
GO:GO:0005524 GO:GO:0005634 GO:GO:0048471 GO:GO:0032880
GO:GO:0007283 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
HOVERGEN:HBG015893 CTD:54514 KO:K13982 GO:GO:0071547 GO:GO:0000237
EMBL:AK014844 EMBL:D14859 IPI:IPI00121394 RefSeq:NP_034159.1
UniGene:Mm.12818 ProteinModelPortal:Q61496 SMR:Q61496 STRING:Q61496
PhosphoSite:Q61496 REPRODUCTION-2DPAGE:IPI00121394
REPRODUCTION-2DPAGE:Q61496 PaxDb:Q61496 PRIDE:Q61496
Ensembl:ENSMUST00000075748 GeneID:13206 KEGG:mmu:13206
UCSC:uc007rwm.2 ChiTaRS:DDX4 NextBio:283368 Bgee:Q61496
CleanEx:MM_DDX4 Genevestigator:Q61496 GermOnline:ENSMUSG00000021758
Uniprot:Q61496
Length = 702
Score = 162 (62.1 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 193 TGSGKNSWKSETEGGESSDSQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 252
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 253 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMACAQTG 308
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 309 SGKTAAFLLPIL 320
>UNIPROTKB|D6RDK4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 CTD:54514 KO:K13982 RefSeq:NP_001160005.1
UniGene:Hs.223581 GeneID:54514 KEGG:hsa:54514 HGNC:HGNC:18700
GenomeRNAi:54514 NextBio:56900 EMBL:AC016632 IPI:IPI00953956
ProteinModelPortal:D6RDK4 SMR:D6RDK4 PRIDE:D6RDK4
Ensembl:ENST00000514278 UCSC:uc010ivz.3 ArrayExpress:D6RDK4
Bgee:D6RDK4 Uniprot:D6RDK4
Length = 704
Score = 162 (62.1 bits), Expect = 7.3e-11, P = 7.3e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 200 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 259
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 260 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 315
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 316 SGKTAAFLLPIL 327
>UNIPROTKB|Q6GWX0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9823 "Sus scrofa" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 EMBL:AY626785 RefSeq:NP_001001910.1 UniGene:Ssc.42782
ProteinModelPortal:Q6GWX0 SMR:Q6GWX0 STRING:Q6GWX0 GeneID:431672
KEGG:ssc:431672 Uniprot:Q6GWX0
Length = 722
Score = 162 (62.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 218 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 277
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 278 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 333
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 334 SGKTAAFLLPIL 345
>UNIPROTKB|Q9NQI0 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007141 "male meiosis I" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0032880 "regulation of protein
localization" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IMP]
[GO:0071546 "pi-body" evidence=ISS] [GO:0071547 "piP-body"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 EMBL:CH471123 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0007141
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 CTD:54514 KO:K13982
OrthoDB:EOG4W6NVF GO:GO:0071547 EMBL:AY004154 EMBL:AF262962
EMBL:AK292417 EMBL:BC047455 EMBL:BC088362 EMBL:AL137462
IPI:IPI00071483 IPI:IPI00456933 PIR:T46407 RefSeq:NP_001136021.1
RefSeq:NP_001160005.1 RefSeq:NP_077726.1 UniGene:Hs.223581
ProteinModelPortal:Q9NQI0 SMR:Q9NQI0 IntAct:Q9NQI0 STRING:Q9NQI0
PhosphoSite:Q9NQI0 DMDM:20138033 REPRODUCTION-2DPAGE:IPI00456933
PaxDb:Q9NQI0 PRIDE:Q9NQI0 Ensembl:ENST00000353507
Ensembl:ENST00000354991 Ensembl:ENST00000505374 GeneID:54514
KEGG:hsa:54514 UCSC:uc003jqg.4 UCSC:uc003jqh.4
GeneCards:GC05P055069 HGNC:HGNC:18700 HPA:CAB026170 HPA:HPA037763
HPA:HPA037764 MIM:605281 neXtProt:NX_Q9NQI0 PharmGKB:PA38646
InParanoid:Q9NQI0 OMA:RDAGESN PhylomeDB:Q9NQI0 GenomeRNAi:54514
NextBio:56900 ArrayExpress:Q9NQI0 Bgee:Q9NQI0 CleanEx:HS_DDX4
Genevestigator:Q9NQI0 GermOnline:ENSG00000152670 GO:GO:0000237
Uniprot:Q9NQI0
Length = 724
Score = 162 (62.1 bits), Expect = 7.6e-11, P = 7.6e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 220 TGSGKNSWKSEAEGGESSDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 279
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 280 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 335
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 336 SGKTAAFLLPIL 347
>UNIPROTKB|E2RMU5 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] [GO:0033391 "chromatoid body" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0000237
"leptotene" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0007283
GO:GO:0003676 GO:GO:0030317 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:RDAGESN GO:GO:0000237 EMBL:AAEX03001439
Ensembl:ENSCAFT00000011062 Uniprot:E2RMU5
Length = 728
Score = 162 (62.1 bits), Expect = 7.7e-11, P = 7.7e-11
Identities = 44/132 (33%), Positives = 72/132 (54%)
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE--RDAVFRKKYN---IHVS 123
T G N +KS + + D + KV P ++ + + + KY+ + VS
Sbjct: 221 TSSGKNSWKSEAEGGESGDTQGPKVTYIPPPPPEDEDSIFAHYQTGINFDKYDTILVEVS 280
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ ACA TG
Sbjct: 281 GHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIILAGRDLMACAQTG 336
Query: 184 SGKTLAFLCPML 195
SGKT AFL P+L
Sbjct: 337 SGKTAAFLLPIL 348
>DICTYBASE|DDB_G0293168 [details] [associations]
symbol:ddx17 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008186 "RNA-dependent ATPase
activity" evidence=ISS] [GO:0006396 "RNA processing" evidence=ISS]
[GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0003724 "RNA helicase
activity" evidence=ISS] [GO:0003723 "RNA binding" evidence=IEA;ISS]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0000184
"nuclear-transcribed mRNA catabolic process, nonsense-mediated
decay" evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0293168 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GenomeReviews:CM000155_GR GO:GO:0000184 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 EMBL:AAFI02000199 KO:K12823 GO:GO:0008186
RefSeq:XP_629279.1 HSSP:P09052 ProteinModelPortal:Q54CE0
PRIDE:Q54CE0 EnsemblProtists:DDB0233431 GeneID:8629001
KEGG:ddi:DDB_G0293168 Uniprot:Q54CE0
Length = 785
Score = 162 (62.1 bits), Expect = 8.5e-11, P = 8.5e-11
Identities = 40/110 (36%), Positives = 58/110 (52%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK + P K ++IE+ FR + + V G VP P+ F + + F YL+
Sbjct: 345 EKNFYLEHPD-VSKFTQEEIEK---FRASFQMTVKGREVPPPIMQFTQ--APF--PGYLM 396
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ + G+ PTPIQ QA P+ L R+ A TGSGKTLAFL P ++ +
Sbjct: 397 KEIIGAGFPNPTPIQSQAWPIALKGRDIIGLAKTGSGKTLAFLLPSIVHI 446
>ASPGD|ASPL0000077157 [details] [associations]
symbol:AN10557 species:162425 "Emericella nidulans"
[GO:0071470 "cellular response to osmotic stress" evidence=IEA]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IEA]
[GO:0031137 "regulation of conjugation with cellular fusion"
evidence=IEA] [GO:0002183 "cytoplasmic translational initiation"
evidence=IEA] [GO:0031047 "gene silencing by RNA" evidence=IEA]
[GO:0010628 "positive regulation of gene expression" evidence=IEA]
[GO:0097308 "cellular response to farnesol" evidence=IEP]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IEA] [GO:0033592 "RNA strand annealing activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003743 EMBL:BN001303 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:GNWANAN EMBL:AACD01000077 ProteinModelPortal:C8V8H4 SMR:C8V8H4
PRIDE:C8V8H4 EnsemblFungi:CADANIAT00005985 Uniprot:C8V8H4
Length = 668
Score = 161 (61.7 bits), Expect = 8.6e-11, P = 8.6e-11
Identities = 38/112 (33%), Positives = 61/112 (54%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
P +++E V + P+K +N D + SG +VP P+ TF
Sbjct: 144 PRLERELFGVPNDPTKQNTGINFANYDDIP------VEASGHDVPEPVNTFTNPP----L 193
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +L+ N+A Y+ PTP+Q+ +IP++++ R+ ACA TGSGKT FL P+L
Sbjct: 194 DDHLISNIALARYQTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPIL 245
>POMBASE|SPAC823.08c [details] [associations]
symbol:SPAC823.08c "ATP-dependent RNA helicase Rrp3
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISS] [GO:0005829 "cytosol" evidence=IDA] [GO:0006364 "rRNA
processing" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC823.08c GO:GO:0005829
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P RefSeq:NP_593835.1 ProteinModelPortal:Q9P6N8
SMR:Q9P6N8 STRING:Q9P6N8 EnsemblFungi:SPAC823.08c.1 GeneID:2543571
KEGG:spo:SPAC823.08c NextBio:20804578 Uniprot:Q9P6N8
Length = 465
Score = 158 (60.7 bits), Expect = 1.0e-10, P = 1.0e-10
Identities = 44/112 (39%), Positives = 63/112 (56%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSG--ANVPSPLRTFVKLSSRFGCESY 146
EK+ ED K LNK+IE +K + + +G N +P +TF +L G
Sbjct: 5 EKKLTED---KKNSSLNKKIETSNSSSEKSSENNNGDSQNNEAP-KTFKEL----GVIDE 56
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
L +LG+K PTPIQ++AIPV+L+ R+ A TGSGKT AF P++ +L
Sbjct: 57 LCEACEKLGFKTPTPIQQEAIPVVLNKRDVIGLAQTGSGKTAAFALPVIQEL 108
>DICTYBASE|DDB_G0281711 [details] [associations]
symbol:ddx27 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281711 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000152_GR GO:GO:0042254 GO:GO:0003723
EMBL:AAFI02000042 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_640597.1 HSSP:Q5STU4 ProteinModelPortal:Q54TJ4
STRING:Q54TJ4 EnsemblProtists:DDB0234201 GeneID:8623207
KEGG:ddi:DDB_G0281711 OMA:SEYRAIR Uniprot:Q54TJ4
Length = 783
Score = 161 (61.7 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 64/209 (30%), Positives = 102/209 (48%)
Query: 15 DKKKFVTDFARF--KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEG 72
DK + DFA K +++ D + +E +K + K V +K KS+ +T
Sbjct: 59 DKPQLPWDFAPTIEKMKQQTHKKTDGQTSLE-DKINQRKT-VKKLKADDDKSVTTKTTNN 116
Query: 73 FNVFKSSKQLVPAVDKE-----KEKVEDGPSKAKKELNKQIERDAVFRKKYN---IHVSG 124
KS+ D+E +E+ E+ ++ +KE+NK+ ++ K I V
Sbjct: 117 NKSKKSNNNDNDDDDEEVNEEEEEEEEEEDNENEKEINKKQQQQQQQSNKQTTDKIKVLQ 176
Query: 125 AN------VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+N V L TF +L LL+ + +LG+ +PTPIQ +AIP+ L+ ++ A
Sbjct: 177 SNRKLKKIVEEELPTFEELH----LSRPLLKAVQKLGFSQPTPIQAKAIPLALNGKDILA 232
Query: 179 CAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
A TGSGKT AFL P+L +L LF +Y
Sbjct: 233 SASTGSGKTAAFLLPVLERL--LFRDSEY 259
>UNIPROTKB|D4ADV9 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 IPI:IPI00782021 Ensembl:ENSRNOT00000060732
Uniprot:D4ADV9
Length = 674
Score = 160 (61.4 bits), Expect = 1.1e-10, P = 1.1e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ AC
Sbjct: 250 VEVSGHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMAC 305
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 306 AQTGSGKTAAFLLPIL 321
>RGD|1308793 [details] [associations]
symbol:Ddx4 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 4"
species:10116 "Rattus norvegicus" [GO:0000237 "leptotene"
evidence=IEA;ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005737 "cytoplasm" evidence=ISO;ISS]
[GO:0007141 "male meiosis I" evidence=IEA;ISO] [GO:0007275
"multicellular organismal development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA;ISO] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0030317 "sperm motility"
evidence=IEA;ISO] [GO:0030529 "ribonucleoprotein complex"
evidence=ISO] [GO:0032880 "regulation of protein localization"
evidence=IEA;ISO] [GO:0033391 "chromatoid body" evidence=IEA;ISO]
[GO:0044464 "cell part" evidence=ISO] [GO:0048471 "perinuclear
region of cytoplasm" evidence=IEA;ISO] [GO:0071546 "pi-body"
evidence=ISO;ISS] [GO:0071547 "piP-body" evidence=ISO;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 160 (61.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ AC
Sbjct: 261 VEVSGHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMAC 316
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 317 AQTGSGKTAAFLLPIL 332
>UNIPROTKB|Q64060 [details] [associations]
symbol:Ddx4 "Probable ATP-dependent RNA helicase DDX4"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1308793 GO:GO:0007275 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0007283 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0071546 GO:GO:0033391 GO:GO:0007141 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 CTD:54514 KO:K13982 OrthoDB:EOG4W6NVF
GO:GO:0071547 GO:GO:0000237 EMBL:S75275 IPI:IPI00208943 PIR:JC2534
RefSeq:NP_001071115.1 UniGene:Rn.198577 ProteinModelPortal:Q64060
SMR:Q64060 STRING:Q64060 PRIDE:Q64060 GeneID:310090 KEGG:rno:310090
NextBio:661610 Genevestigator:Q64060 Uniprot:Q64060
Length = 713
Score = 160 (61.4 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 33/76 (43%), Positives = 51/76 (67%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++L+ R+ AC
Sbjct: 261 VEVSGHDAPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIVLAGRDLMAC 316
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 317 AQTGSGKTAAFLLPIL 332
>ZFIN|ZDB-GENE-030131-667 [details] [associations]
symbol:ddx46 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 46" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0000398 "mRNA
splicing, via spliceosome" evidence=IMP] [GO:0031017 "exocrine
pancreas development" evidence=IMP] [GO:0007420 "brain development"
evidence=IMP] [GO:0048546 "digestive tract morphogenesis"
evidence=IMP] [GO:0072576 "liver morphogenesis" evidence=IMP]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0008380 "RNA
splicing" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006397 "mRNA processing" evidence=IEA]
[GO:0016607 "nuclear speck" evidence=IEA] [GO:0015030 "Cajal body"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-667
GO:GO:0005524 GO:GO:0007420 GO:GO:0003676 GO:GO:0000398
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0048546
GO:GO:0008026 GO:GO:0031017 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:IEEENKF GO:GO:0072576
EMBL:CU302316 IPI:IPI00865887 Ensembl:ENSDART00000099265
ArrayExpress:F1RA00 Bgee:F1RA00 Uniprot:F1RA00
Length = 1035
Score = 162 (62.1 bits), Expect = 1.2e-10, P = 1.2e-10
Identities = 47/157 (29%), Positives = 77/157 (49%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKK 102
+GE + ++ + + + + + + GF K K L P VD +K + E
Sbjct: 266 KGELMENDQDAMEYSSEEEEVDLQ-TALTGFQT-KQRKVLEP-VDHQKIQYEPFRKNFYV 322
Query: 103 ELNKQIERDAVFRKKYNIHVSGANV-----PSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
E+ + +Y + + G +V P P++T+V+ G +L L + Y+
Sbjct: 323 EVPELARMSPEEVSEYRLELEGISVKGKGCPKPIKTWVQC----GISMKVLNALKKHNYE 378
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
+PTPIQ QAIP ++S R+ A TGSGKT+AFL PM
Sbjct: 379 KPTPIQAQAIPAIMSGRDLIGIAKTGSGKTIAFLLPM 415
>UNIPROTKB|G3X7G8 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:DAAA02043967 EMBL:DAAA02043968
RefSeq:NP_001179318.1 UniGene:Bt.41740 Ensembl:ENSBTAT00000027398
GeneID:514901 KEGG:bta:514901 NextBio:20871562 Uniprot:G3X7G8
Length = 620
Score = 159 (61.0 bits), Expect = 1.3e-10, P = 1.3e-10
Identities = 41/91 (45%), Positives = 50/91 (54%)
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
QIE R++ I V G VP P+ F G L RNL GY+ PTPIQ Q
Sbjct: 182 QIEN---LRRQLGITVRGRGVPRPIVDF----EHCGFPEALNRNLKASGYEVPTPIQMQM 234
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
IPV L R+ A A TGSGKT AFL P++++
Sbjct: 235 IPVGLLGRDVLASADTGSGKTAAFLLPVILR 265
>UNIPROTKB|A4RN46 [details] [associations]
symbol:PRP5 "Pre-mRNA-processing ATP-dependent RNA helicase
PRP5" species:242507 "Magnaporthe oryzae 70-15" [GO:0043581
"mycelium development" evidence=IEP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0008380 GO:GO:0006397 GO:GO:0003676
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:CM001232 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG40CMR1 RefSeq:XP_003713486.1
ProteinModelPortal:A4RN46 EnsemblFungi:MGG_15532T0 GeneID:12987087
KEGG:mgr:MGG_15532 Uniprot:A4RN46
Length = 1012
Score = 161 (61.7 bits), Expect = 1.5e-10, P = 1.5e-10
Identities = 45/128 (35%), Positives = 69/128 (53%)
Query: 77 KSSKQLVPAVDKEKEKVEDGPSK---AKKELNKQIERD-AVFRKKYN-IHVSGANVPSPL 131
K K+ +P +D K + EL++ E + A R + + I VSG +VP P+
Sbjct: 318 KRKKKEIPTIDYSKLDIVPVRKNFWVEPYELSEMTEAEVAELRLELDGIKVSGKDVPKPV 377
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
+ + S G +L +A+L Y +PT IQ QA+PV++S R+ A TGSGKT+AFL
Sbjct: 378 QKW----SLCGLTRPILDVIAKLEYDKPTAIQMQALPVIMSGRDVVGVAKTGSGKTMAFL 433
Query: 192 CPMLMKLR 199
PM ++
Sbjct: 434 LPMFRHIK 441
>DICTYBASE|DDB_G0288501 [details] [associations]
symbol:ddx42 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0005575 "cellular_component" evidence=ND]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0288501 GO:GO:0005524 GO:GO:0005634
GenomeReviews:CM000154_GR GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AAFI02000112 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
KO:K12835 RefSeq:XP_636700.1 ProteinModelPortal:Q54IV3
STRING:Q54IV3 EnsemblProtists:DDB0233432 GeneID:8626657
KEGG:ddi:DDB_G0288501 OMA:DRDKRGG Uniprot:Q54IV3
Length = 986
Score = 160 (61.4 bits), Expect = 1.9e-10, P = 1.9e-10
Identities = 39/117 (33%), Positives = 67/117 (57%)
Query: 83 VPAVDKEKEK-VEDGPSKAKKELN-KQIERDAVF--RKKYNIHVSGANVPSPLRTFVKLS 138
+P +D KE+ +E ++ + + + VF RK +I ++G ++ +P+ +F
Sbjct: 252 LPPIDHSKEEYIEFNKIFYEEHPDIANLTEEQVFEIRKNLDIRMTGTDLINPVTSF---- 307
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+G + LL+ +A+ + PTPIQ+QAIP+ LS R+ A A TGSGKT F+ P +
Sbjct: 308 GHYGFDDILLQAIAKQSIETPTPIQKQAIPIALSGRDLIAIAKTGSGKTATFIWPSI 364
>POMBASE|SPAC22F3.08c [details] [associations]
symbol:rok1 "ATP-dependent RNA helicase Rok1
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005730 "nucleolus" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006364 "rRNA processing" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPAC22F3.08c GO:GO:0005829 GO:GO:0005524
EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0004004 eggNOG:COG0513 HOGENOM:HOG000242486 KO:K14779
PIR:T38183 RefSeq:NP_593033.1 ProteinModelPortal:Q09775
STRING:Q09775 EnsemblFungi:SPAC22F3.08c.1 GeneID:2541786
KEGG:spo:SPAC22F3.08c OMA:ERESINT OrthoDB:EOG425926
NextBio:20802875 Uniprot:Q09775
Length = 481
Score = 155 (59.6 bits), Expect = 2.2e-10, P = 2.2e-10
Identities = 48/120 (40%), Positives = 61/120 (50%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
K K KV PS +KE K + + K V+G N P+ F E L
Sbjct: 12 KFKNKVPQ-PSIKEKEAKKL---QGITKGKAK--VTGNNPVDPIEEFP--------EGIL 57
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
NL + E T IQR AIP + S R+ ACAPTGSGKT+A+L P+L KL+ L +P Y
Sbjct: 58 CENLKKQNITECTTIQRYAIPTIGSKRDLLACAPTGSGKTIAYLFPILQKLQ-LHVPGGY 116
>ASPGD|ASPL0000006660 [details] [associations]
symbol:AN5931 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 GO:GO:0003723 EMBL:BN001301
EMBL:AACD01000101 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 RefSeq:XP_663535.1
ProteinModelPortal:Q5B0J9 STRING:Q5B0J9 PRIDE:Q5B0J9
EnsemblFungi:CADANIAT00007099 GeneID:2870997 KEGG:ani:AN5931.2
OMA:IDAMSGY OrthoDB:EOG47SWP6 Uniprot:Q5B0J9
Length = 563
Score = 156 (60.0 bits), Expect = 2.3e-10, P = 2.3e-10
Identities = 40/118 (33%), Positives = 60/118 (50%)
Query: 92 KVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRN 150
K E K ++ + +R+ FRKK + V G +VP P+ TF G Y+L
Sbjct: 99 KFEKSFYKEHPDVTARSQREVDEFRKKCEMTVQGRDVPRPVETF----DEAGFPQYVLSE 154
Query: 151 LAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
+ G+++PT IQ Q P+ LS R+ A TGSGKTL++ P ++ + L P D
Sbjct: 155 VKAQGFEKPTAIQSQGWPMALSGRDVVGIAETGSGKTLSYCLPAIVHINAQPLLAPGD 212
>SGD|S000002189 [details] [associations]
symbol:DBP10 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0030687 "preribosome, large subunit precursor"
evidence=IGI;IPI] [GO:0000463 "maturation of LSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000466 "maturation of 5.8S rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 SGD:S000002189
GO:GO:0005524 GO:GO:0005730 EMBL:BK006938 GO:GO:0003723
GO:GO:0030687 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:Z71781 GO:GO:0000463 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455
OMA:HLKVEMN OrthoDB:EOG4JWZP1 EMBL:Z74079 PIR:S67564
RefSeq:NP_010253.2 ProteinModelPortal:Q12389 SMR:Q12389
DIP:DIP-6387N IntAct:Q12389 MINT:MINT-613064 STRING:Q12389
PaxDb:Q12389 PeptideAtlas:Q12389 EnsemblFungi:YDL031W GeneID:851530
KEGG:sce:YDL031W CYGD:YDL031w GeneTree:ENSGT00550000075100
NextBio:968920 Genevestigator:Q12389 GermOnline:YDL031W
GO:GO:0000466 Uniprot:Q12389
Length = 995
Score = 154 (59.3 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 28/59 (47%), Positives = 40/59 (67%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
FG +L N+ G+++PTPIQR+ IP++L R+ A TGSGKT AF+ PM+ KL+
Sbjct: 142 FGLSKIVLNNIKRKGFRQPTPIQRKTIPLILQSRDIVGMARTGSGKTAAFILPMVEKLK 200
Score = 36 (17.7 bits), Expect = 2.4e-10, Sum P(2) = 2.4e-10
Identities = 8/24 (33%), Positives = 14/24 (58%)
Query: 94 EDGPSKAKKELNKQIERDAVFRKK 117
E+G + KK NK I++ +K+
Sbjct: 68 EEGVNNKKKAENKDIKKKKNSKKE 91
Score = 35 (17.4 bits), Expect = 3.0e-10, Sum P(2) = 3.0e-10
Identities = 8/19 (42%), Positives = 11/19 (57%)
Query: 90 KEKVEDGPSKAKKELNKQI 108
K+K E+ K KK K+I
Sbjct: 74 KKKAENKDIKKKKNSKKEI 92
>TAIR|locus:2035741 [details] [associations]
symbol:RH20 "RNA helicase 20" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=ISM]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA;ISS]
[GO:0005829 "cytosol" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005524 GO:GO:0005634
GO:GO:0000184 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AC073944 EMBL:AY062745 EMBL:AY128786 EMBL:AJ010470
IPI:IPI00528901 PIR:B96593 PIR:T51345 RefSeq:NP_175911.1
UniGene:At.20425 ProteinModelPortal:Q9C718 SMR:Q9C718 PaxDb:Q9C718
PRIDE:Q9C718 ProMEX:Q9C718 EnsemblPlants:AT1G55150.1 GeneID:841958
KEGG:ath:AT1G55150 GeneFarm:937 TAIR:At1g55150 InParanoid:Q9C718
OMA:CANHNIL PhylomeDB:Q9C718 ProtClustDB:CLSN2682455
Genevestigator:Q9C718 GermOnline:AT1G55150 Uniprot:Q9C718
Length = 501
Score = 155 (59.6 bits), Expect = 2.4e-10, P = 2.4e-10
Identities = 36/108 (33%), Positives = 59/108 (54%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK + P+ A + ++E +RK I V G ++P P+++F + G Y+L
Sbjct: 60 EKNFYVESPAVAAMT-DTEVEE---YRKLREITVEGKDIPKPVKSFRDV----GFPDYVL 111
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ + G+ EPTPIQ Q P+ + R+ A TGSGKTL++L P ++
Sbjct: 112 EEVKKAGFTEPTPIQSQGWPMAMKGRDLIGIAETGSGKTLSYLLPAIV 159
>ASPGD|ASPL0000071661 [details] [associations]
symbol:AN9445 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 EMBL:BN001303
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 ProteinModelPortal:C8VAA2
EnsemblFungi:CADANIAT00005592 Uniprot:C8VAA2
Length = 217
Score = 150 (57.9 bits), Expect = 2.6e-10, P = 2.6e-10
Identities = 63/208 (30%), Positives = 95/208 (45%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
M+ ++F+ + V D VT+ K N E LA + VE + D EK V+ +
Sbjct: 1 MDDTSNFVVSTVR-DALADVTNVQNTK-NIEVSALAREKGRVEPKDYDYEK-YVTVIPSE 57
Query: 61 KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKA--KKELNKQ--IERDAV-FR 115
K GE + F + E + GP +++L + I R +
Sbjct: 58 KPAE-KGENYQDEQSFPEWAANAVKYEWNDEYGDVGPENPHLEEQLFRAEFINRTGLKIE 116
Query: 116 KKYNIHVSGANV--PSPLRTFVKLSSRF---GCESYLLRNLAELGYKEPTPIQRQAIPVL 170
NI V + PSP+RT + ++F G + +N+ GY+ PTPIQ AIP +
Sbjct: 117 NLQNIDVVAESHERPSPIRTG-NILNKFDDAGLHPIMRQNICLCGYEFPTPIQAYAIPAV 175
Query: 171 LSDRECFACAPTGSGKTLAFLCPMLMKL 198
L+ + A A TGSGKT AFL P+L +L
Sbjct: 176 LTSHDLIAIAQTGSGKTAAFLIPVLSQL 203
>UNIPROTKB|E1BXX5 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:AADN02033796 IPI:IPI00587299
RefSeq:XP_422189.2 ProteinModelPortal:E1BXX5
Ensembl:ENSGALT00000003389 GeneID:424346 KEGG:gga:424346
NextBio:20826688 Uniprot:E1BXX5
Length = 625
Score = 156 (60.0 bits), Expect = 2.7e-10, P = 2.7e-10
Identities = 40/95 (42%), Positives = 51/95 (53%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
L+ Q E+ + + I + G VP P+ F G L NL GY+ PTPIQ
Sbjct: 181 LSLQDEQVENLKLQLGIAIQGQQVPRPIIEF----EHCGFPETLNSNLKNSGYEVPTPIQ 236
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
Q IPV L R+ A A TGSGKT AFL P++MK+
Sbjct: 237 MQMIPVGLLGRDIVASADTGSGKTAAFLLPVIMKV 271
>POMBASE|SPCC1795.11 [details] [associations]
symbol:sum3 "translation initiation RNA helicase Sum3"
species:4896 "Schizosaccharomyces pombe" [GO:0002183 "cytoplasmic
translational initiation" evidence=IMP] [GO:0003743 "translation
initiation factor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005829 "cytosol" evidence=IDA] [GO:0007346
"regulation of mitotic cell cycle" evidence=IMP] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0031047
"gene silencing by RNA" evidence=IDA] [GO:0031137 "regulation of
conjugation with cellular fusion" evidence=IGI] [GO:0071470
"cellular response to osmotic stress" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC1795.11 GO:GO:0005829 GO:GO:0005524
GO:GO:0007346 GO:GO:0051301 GO:GO:0007067 EMBL:CU329672
GenomeReviews:CU329672_GR GO:GO:0071470 GO:GO:0010628 GO:GO:0031047
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0031137 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0002183 HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4
OMA:KYERGGN EMBL:AF025536 EMBL:AF084222 EMBL:AB012389 EMBL:AJ237697
EMBL:AB027871 PIR:T43543 RefSeq:NP_588033.1
ProteinModelPortal:O13370 SMR:O13370 IntAct:O13370
MINT:MINT-4666622 STRING:O13370 PRIDE:O13370
EnsemblFungi:SPCC1795.11.1 GeneID:2538689 KEGG:spo:SPCC1795.11
NextBio:20799875 Uniprot:O13370
Length = 636
Score = 156 (60.0 bits), Expect = 2.8e-10, P = 2.8e-10
Identities = 34/83 (40%), Positives = 51/83 (61%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + VSG ++ P+ F S+LL+N+ GY +PTP+Q+ +IP++ S
Sbjct: 151 EKYDDIPVEVSGGDI-EPVNEFTSPP----LNSHLLQNIKLSGYTQPTPVQKNSIPIVTS 205
Query: 173 DRECFACAPTGSGKTLAFLCPML 195
R+ ACA TGSGKT FL P+L
Sbjct: 206 GRDLMACAQTGSGKTAGFLFPIL 228
>WB|WBGene00008119 [details] [associations]
symbol:C46F11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0000003 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083
HOGENOM:HOG000268793 KO:K12835 GeneTree:ENSGT00610000086076
OMA:QEYANLM EMBL:Z81449 PIR:T19974 RefSeq:NP_497743.1
ProteinModelPortal:Q93382 SMR:Q93382 STRING:Q93382 PaxDb:Q93382
EnsemblMetazoa:C46F11.4 GeneID:175469 KEGG:cel:CELE_C46F11.4
UCSC:C46F11.4 CTD:175469 WormBase:C46F11.4 InParanoid:Q93382
NextBio:888300 Uniprot:Q93382
Length = 811
Score = 157 (60.3 bits), Expect = 3.1e-10, P = 3.1e-10
Identities = 54/198 (27%), Positives = 97/198 (48%)
Query: 13 SFDKKKFVTDFARFKENKESENLADD-FSFVEGEKTDPEKAMVSFVKKRKRKSIAG---- 67
S DKK KE K++E+ + + ++ D ++++ F+++ K K
Sbjct: 134 SSDKKVSEQKEKDRKEGKDTEDPSKKGLGRADIDEEDMQESLFKFMEEYKEKHENDDEQL 193
Query: 68 ETVEGFNVFKSSKQLV-PAVDKEKEKVEDGP-SKAKKELNKQIER----DAV-FRKKYNI 120
E E N+ S K+++ P D + +++ +K E ++ I+R D + + N+
Sbjct: 194 EYDEDGNIIWSWKKVIDPLPDIDHSQIQYQKFNKNFYEEHEDIKRLHYMDVIRLQNTMNL 253
Query: 121 HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACA 180
V G P P+ +F + F + L+ + + Y++PTPIQ AIP LS R+ A
Sbjct: 254 RVGGLKPPRPVCSF----AHFSFDKLLMEAIRKSEYEQPTPIQAMAIPSALSGRDVLGIA 309
Query: 181 PTGSGKTLAFLCPMLMKL 198
TGSGKT A+L P ++ +
Sbjct: 310 KTGSGKTAAYLWPAIVHI 327
>DICTYBASE|DDB_G0283661 [details] [associations]
symbol:ddx3 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006397 "mRNA processing"
evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006413 "translational initiation" evidence=IEA] [GO:0006412
"translation" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 dictyBase:DDB_G0283661 GO:GO:0005524 GO:GO:0005737
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0006397
GO:GO:0003743 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K11594 HSSP:P09052 RefSeq:XP_638950.1 ProteinModelPortal:Q54QS3
SMR:Q54QS3 PRIDE:Q54QS3 EnsemblProtists:DDB0233447 GeneID:8624189
KEGG:ddi:DDB_G0283661 OMA:SEHICAP Uniprot:Q54QS3
Length = 712
Score = 156 (60.0 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 39/110 (35%), Positives = 62/110 (56%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
+D E+ K E+ K + N I+ +A +I S ++ +PL +F + G
Sbjct: 204 IDLEEHKAEE--IFKKNDDNIGIDFNAYDDDDISIETS-EHICAPLNSFADVD--LG--D 256
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
LL N+ Y +PTP+Q+ A+P++L +R+ ACA TGSGKT AFL P++
Sbjct: 257 VLLGNIKHAKYTKPTPVQKSALPIILKNRDLMACAQTGSGKTAAFLFPII 306
>TAIR|locus:2084178 [details] [associations]
symbol:DRH1 "DEAD box RNA helicase 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001202 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 Pfam:PF00397
PROSITE:PS00039 PROSITE:PS01159 PROSITE:PS50020 PROSITE:PS51194
SMART:SM00456 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0000184 GO:GO:0003723
EMBL:AC009325 SUPFAM:SSF51045 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823
EMBL:AB010259 EMBL:AY062591 EMBL:AF428313 EMBL:AY050375
EMBL:BT000795 EMBL:BT009670 IPI:IPI00544638 IPI:IPI00545196
PIR:T52137 RefSeq:NP_001030619.1 RefSeq:NP_566141.1
RefSeq:NP_850492.1 RefSeq:NP_974206.1 UniGene:At.22096
ProteinModelPortal:Q8H136 SMR:Q8H136 IntAct:Q8H136 STRING:Q8H136
PaxDb:Q8H136 PRIDE:Q8H136 EnsemblPlants:AT3G01540.2
EnsemblPlants:AT3G01540.3 EnsemblPlants:AT3G01540.4 GeneID:821116
KEGG:ath:AT3G01540 GeneFarm:931 TAIR:At3g01540 InParanoid:Q8H136
OMA:DPSTEAY PhylomeDB:Q8H136 ProtClustDB:CLSN2687967
Genevestigator:Q8H136 GermOnline:AT3G01540 Uniprot:Q8H136
Length = 619
Score = 155 (59.6 bits), Expect = 3.4e-10, P = 3.4e-10
Identities = 35/86 (40%), Positives = 51/86 (59%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+ +++ I VSG VP PL +F ++ F E LLR + G+ PTPIQ Q+ P+ +
Sbjct: 140 YSRRHEITVSGGQVPPPLMSFE--ATGFPPE--LLREVLSAGFSAPTPIQAQSWPIAMQG 195
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + L+
Sbjct: 196 RDIVAIAKTGSGKTLGYLIPGFLHLQ 221
>FB|FBgn0021995 [details] [associations]
symbol:Rs1 "Rs1" species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0042254
"ribosome biogenesis" evidence=NAS] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 EMBL:AE013599 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0016779 HSSP:P10081 GeneTree:ENSGT00550000074997 KO:K13181
CTD:6247 EMBL:BT004908 RefSeq:NP_651970.1 UniGene:Dm.11481
SMR:Q7JQN4 STRING:Q7JQN4 EnsemblMetazoa:FBtr0088788 GeneID:44087
KEGG:dme:Dmel_CG2173 UCSC:CG2173-RA FlyBase:FBgn0021995
InParanoid:Q7JQN4 OMA:EHYIHRV OrthoDB:EOG42NGFQ GenomeRNAi:44087
NextBio:836725 Uniprot:Q7JQN4
Length = 782
Score = 156 (60.0 bits), Expect = 3.7e-10, P = 3.7e-10
Identities = 60/200 (30%), Positives = 100/200 (50%)
Query: 16 KKKFVTDFAR---FKEN-KE-SENLADDF-SFVEGE---KTDPEKAMVSFVKKRKRKSIA 66
+ K VT+F + F + KE +++ DD +V+ + KTD +K K+ +++A
Sbjct: 38 RHKKVTEFEKGFEFVSSVKEYNQDTWDDLMKYVKRKARTKTD-DKIAARLQKRGGAEAVA 96
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGAN 126
E +G + S +L + +EK E K KK+ ++ E D + ++ V AN
Sbjct: 97 AEQSDGSEIDLSEDELKHDNLRLREKKES--KKKKKKAGEEDEEDEGEKMQFADTVE-AN 153
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
+ +F +++ L+R + LGY PTPIQ IPV L R+ CA TG+GK
Sbjct: 154 --EQITSFYQMN----LSRPLMRAIGVLGYIYPTPIQASTIPVALLGRDICGCAATGTGK 207
Query: 187 TLAFLCPMLMKLRVLFIPFD 206
T A++ P L +L L+ P +
Sbjct: 208 TAAYMLPTLERL--LYRPLN 225
>WB|WBGene00018776 [details] [associations]
symbol:F53H1.1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0002009
"morphogenesis of an epithelium" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006898 "receptor-mediated endocytosis" evidence=IMP]
[GO:0040018 "positive regulation of multicellular organism growth"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0002009 GO:GO:0006898 GO:GO:0040007 GO:GO:0040010
GO:GO:0002119 GO:GO:0040011 GO:GO:0040018 GO:GO:0003676
GO:GO:0040035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:P10081 GeneTree:ENSGT00610000086076 KO:K12811
HOGENOM:HOG000007229 OMA:IEEENKF EMBL:FO081458
RefSeq:NP_001033411.1 ProteinModelPortal:Q965K2 SMR:Q965K2
PaxDb:Q965K2 PRIDE:Q965K2 EnsemblMetazoa:F53H1.1 GeneID:176943
KEGG:cel:CELE_F53H1.1 UCSC:F53H1.1 CTD:176943 WormBase:F53H1.1
InParanoid:Q965K2 NextBio:894678 ArrayExpress:Q965K2 Uniprot:Q965K2
Length = 970
Score = 157 (60.3 bits), Expect = 3.9e-10, P = 3.9e-10
Identities = 51/184 (27%), Positives = 86/184 (46%)
Query: 17 KKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVF 76
K+ T A+ K ++ + + V+ EK +PEK V + I +E
Sbjct: 184 KEIATKNAK-KTGNSTQKASGIVTIVQEEKPEPEKGQVLENEDNMDMVIDDFDIETAAAS 242
Query: 77 KSSK-QLVPAVDKEK---EKVEDGPSKAKKELNKQIERDA-VFRKKYN-IHVSGANVPSP 130
K +++ D K K + +E+ + + + +R++ + I V G + P P
Sbjct: 243 LCHKGRMLAQTDHSKVYYRKFKKNFYIETEEIRRMTKAEVKAYREELDSITVKGIDCPKP 302
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
++T+ + G ++ L + Y +PT IQ QAIP ++S R+ A TGSGKTLAF
Sbjct: 303 IKTWAQC----GVNLKMMNVLKKFEYSKPTSIQAQAIPSIMSGRDVIGIAKTGSGKTLAF 358
Query: 191 LCPM 194
L PM
Sbjct: 359 LLPM 362
>UNIPROTKB|Q83DM8 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:227377
"Coxiella burnetii RSA 493" [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE016828 GenomeReviews:AE016828_GR InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927 OMA:HLIKQHN
RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8 GeneID:1208557
KEGG:cbu:CBU_0670 PATRIC:17930019 ProtClustDB:CLSK914228
BioCyc:CBUR227377:GJ7S-666-MONOMER Uniprot:Q83DM8
Length = 420
Score = 154 (59.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + LLR + E GY EPTP+QRQAIPV+L R+ A TG+GKT F P+L +L V
Sbjct: 16 GLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74
>TIGR_CMR|CBU_0670 [details] [associations]
symbol:CBU_0670 "ATP-dependent RNA helicase RhlE,
putative" species:227377 "Coxiella burnetii RSA 493" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE016828 GenomeReviews:AE016828_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
OMA:HLIKQHN RefSeq:NP_819700.2 ProteinModelPortal:Q83DM8
GeneID:1208557 KEGG:cbu:CBU_0670 PATRIC:17930019
ProtClustDB:CLSK914228 BioCyc:CBUR227377:GJ7S-666-MONOMER
Uniprot:Q83DM8
Length = 420
Score = 154 (59.3 bits), Expect = 4.5e-10, P = 4.5e-10
Identities = 31/59 (52%), Positives = 39/59 (66%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + LLR + E GY EPTP+QRQAIPV+L R+ A TG+GKT F P+L +L V
Sbjct: 16 GLSAELLRAIREQGYVEPTPVQRQAIPVILQARDVMVTAQTGTGKTAGFTLPLLQRLFV 74
>UNIPROTKB|F1RSJ7 [details] [associations]
symbol:DDX42 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0008104 "protein localization" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0008104 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 OMA:QGVNNTA
GeneTree:ENSGT00610000086076 EMBL:CU466402 EMBL:CU466386
Ensembl:ENSSSCT00000018821 Uniprot:F1RSJ7
Length = 941
Score = 155 (59.6 bits), Expect = 6.1e-10, P = 6.1e-10
Identities = 52/182 (28%), Positives = 87/182 (47%)
Query: 27 KENKESENLADDFSFVEGEKTD----PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
KE K + + DD + ++ E V++ + ++ ++ +G + S K +
Sbjct: 139 KERKNVKGIRDDIEEEDDQEAYFRYMAENPTAGVVQEEEEDNLEYDS-DGNPIAPSKKII 197
Query: 83 VPAVDKEKEKVEDGPSKAKKELNKQIER-DAVFRKKYN-IH----VSGANVPSPLRTFVK 136
P + +++ + K N + E DA + N +H VSGA P P +F
Sbjct: 198 DPLPPIDHSELDRNYFEIKIIYNTKDECIDASNLELINTLHFISRVSGAAPPRPGSSF-- 255
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ FG + L+ + + Y +PTPIQ Q +PV LS R+ A TGSGKT AF+ PML+
Sbjct: 256 --AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPVALSGRDMIGIAKTGSGKTAAFIWPMLI 313
Query: 197 KL 198
+
Sbjct: 314 HI 315
>RGD|1359520 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10116 "Rattus norvegicus" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005622 "intracellular"
evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1359520 GO:GO:0005524
GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 146 (56.5 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
QIE +++ I V G V P+ F G L +NL + GY+ PTPIQ Q
Sbjct: 181 QIE---TLKQQLGISVQGQEVARPIIDF----EHCGFPETLNQNLKKSGYEVPTPIQMQM 233
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
IPV L R+ A A TGSGKT AFL P++++
Sbjct: 234 IPVGLLGRDILASADTGSGKTAAFLLPVIIR 264
Score = 48 (22.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 22/90 (24%), Positives = 33/90 (36%)
Query: 30 KESENLADDFSFVEGEKTDPEKAMVSFVKKRKR---KSIAGETVEGFNVFKSSKQLVPAV 86
K N DD E +K+ PE A + R+ +S+ E V +S P+
Sbjct: 8 KLKRNSNDDLKSCEAKKSKPEAAGLQLEGNRETLVLESVTKEAVTADRPGSASSTSSPSC 67
Query: 87 DKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
E GP + K+ + E F K
Sbjct: 68 QLA-EVCSTGPDQGVKDSHPSEEPVKSFSK 96
>UNIPROTKB|Q66HG7 [details] [associations]
symbol:Ddx59 "Probable ATP-dependent RNA helicase DDX59"
species:10116 "Rattus norvegicus" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1359520
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 GeneTree:ENSGT00610000086076 CTD:83479
HOGENOM:HOG000006599 HOVERGEN:HBG106120 EMBL:BC081871
IPI:IPI00371561 RefSeq:NP_001005535.1 RefSeq:NP_001177749.1
UniGene:Rn.230507 UniGene:Rn.34313 ProteinModelPortal:Q66HG7
SMR:Q66HG7 PhosphoSite:Q66HG7 PRIDE:Q66HG7
Ensembl:ENSRNOT00000043798 GeneID:289402 KEGG:rno:289402
UCSC:RGD:1359520 NextBio:629792 ArrayExpress:Q66HG7
Genevestigator:Q66HG7 Uniprot:Q66HG7
Length = 589
Score = 146 (56.5 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 38/91 (41%), Positives = 50/91 (54%)
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
QIE +++ I V G V P+ F G L +NL + GY+ PTPIQ Q
Sbjct: 181 QIE---TLKQQLGISVQGQEVARPIIDF----EHCGFPETLNQNLKKSGYEVPTPIQMQM 233
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
IPV L R+ A A TGSGKT AFL P++++
Sbjct: 234 IPVGLLGRDILASADTGSGKTAAFLLPVIIR 264
Score = 48 (22.0 bits), Expect = 9.0e-10, Sum P(2) = 9.0e-10
Identities = 22/90 (24%), Positives = 33/90 (36%)
Query: 30 KESENLADDFSFVEGEKTDPEKAMVSFVKKRKR---KSIAGETVEGFNVFKSSKQLVPAV 86
K N DD E +K+ PE A + R+ +S+ E V +S P+
Sbjct: 8 KLKRNSNDDLKSCEAKKSKPEAAGLQLEGNRETLVLESVTKEAVTADRPGSASSTSSPSC 67
Query: 87 DKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
E GP + K+ + E F K
Sbjct: 68 QLA-EVCSTGPDQGVKDSHPSEEPVKSFSK 96
>WB|WBGene00011032 [details] [associations]
symbol:R05D11.4 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081
GeneTree:ENSGT00550000074863 HOGENOM:HOG000242486 KO:K14779
OMA:NVMKQSG EMBL:Z75546 PIR:T23922 RefSeq:NP_492326.1
ProteinModelPortal:Q21736 SMR:Q21736 STRING:Q21736 PaxDb:Q21736
EnsemblMetazoa:R05D11.4.1 EnsemblMetazoa:R05D11.4.2 GeneID:172651
KEGG:cel:CELE_R05D11.4 UCSC:R05D11.4 CTD:172651 WormBase:R05D11.4
InParanoid:Q21736 NextBio:876429 Uniprot:Q21736
Length = 581
Score = 153 (58.9 bits), Expect = 1.5e-09, P = 1.5e-09
Identities = 58/196 (29%), Positives = 92/196 (46%)
Query: 16 KKKFVTDFARFKE----NKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVE 71
KKK D + KE +ES D+ E E + VKK K+K+ ++E
Sbjct: 18 KKKDADDLNKKKELSTITEESLRRYDELR--EKMIGKVESKIEKKVKKNKKKA----SIE 71
Query: 72 GFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPL 131
+ S K++ + + +VE+ +K + K ++ D R+ I G ++P+ +
Sbjct: 72 ---ILASRKRVHDSDGDSENEVEETVGDVEKRMQKLLD-D--IRRTNRIFTWGDHLPNII 125
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
F S LL L+E ++P+PIQ Q+IP + R A APTGSGKTLAF
Sbjct: 126 LRF----SDSSMSPSLLNRLSENSIRQPSPIQMQSIPFMTERRNVLASAPTGSGKTLAFA 181
Query: 192 CPMLMKLRVLFIPFDY 207
P++ ++ L DY
Sbjct: 182 LPVIDEILELKQRADY 197
>UNIPROTKB|H0Y8L8 [details] [associations]
symbol:DDX41 "Probable ATP-dependent RNA helicase DDX41"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 HGNC:HGNC:18674 ChiTaRS:DDX41 EMBL:AC145098
Ensembl:ENST00000508279 Uniprot:H0Y8L8
Length = 173
Score = 138 (53.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 30/70 (42%), Positives = 44/70 (62%)
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
+P P+++F ++ +F + +LR L + G PTPIQ Q IP +LS R+ A TGSGK
Sbjct: 2 IPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIPTILSGRDMIGIAFTGSGK 57
Query: 187 TLAFLCPMLM 196
TL F P++M
Sbjct: 58 TLVFTLPVIM 67
>ASPGD|ASPL0000013201 [details] [associations]
symbol:AN4233 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 EMBL:BN001302
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 EMBL:AACD01000068 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268802 KO:K14777 OMA:IFIPSKF
RefSeq:XP_661837.1 ProteinModelPortal:Q5B5E7 SMR:Q5B5E7
STRING:Q5B5E7 EnsemblFungi:CADANIAT00004427 GeneID:2873652
KEGG:ani:AN4233.2 OrthoDB:EOG4ZPJ3P Uniprot:Q5B5E7
Length = 465
Score = 152 (58.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 40/104 (38%), Positives = 53/104 (50%)
Query: 98 SKAKKELNKQIERDAVFRK---KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
++ + E N E ++V + K SG P+P ++F +L G L +
Sbjct: 10 TEKQPETNSDSEAESVSSRGSAKDETQTSGEE-PAPAKSFKEL----GIIDQLCEACENM 64
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GYK PTPIQ QAIP+ L R+ A TGSGKT AF PML L
Sbjct: 65 GYKAPTPIQSQAIPLALEGRDVIGLAETGSGKTAAFALPMLQAL 108
>ZFIN|ZDB-GENE-031030-3 [details] [associations]
symbol:ddx49 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
49" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031030-3 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14778
HOVERGEN:HBG100512 CTD:54555 EMBL:BC047834 IPI:IPI00551936
RefSeq:NP_938179.1 UniGene:Dr.77634 ProteinModelPortal:Q7ZUT9
STRING:Q7ZUT9 GeneID:386632 KEGG:dre:386632 InParanoid:Q7ZUT9
NextBio:20813961 ArrayExpress:Q7ZUT9 Uniprot:Q7ZUT9
Length = 468
Score = 152 (58.6 bits), Expect = 1.8e-09, P = 1.8e-09
Identities = 28/68 (41%), Positives = 40/68 (58%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
G +L++ ++G PT +Q + IP +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 8 GLSEWLIQQCKQMGISRPTAVQEKCIPAILDGRDCMGCAKTGSGKTAAFVLPVLQKLSE- 66
Query: 202 FIPFDYFC 209
P+ FC
Sbjct: 67 -DPYGVFC 73
>WB|WBGene00002244 [details] [associations]
symbol:laf-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0042006
"masculinization of hermaphroditic germ-line" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0043186 "P granule"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0009792
GO:GO:0040007 GO:GO:0002119 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
HOGENOM:HOG000268804 KO:K11594 GO:GO:0042006 EMBL:FO081822
EMBL:FJ348231 RefSeq:NP_001254859.1 UniGene:Cel.25045
ProteinModelPortal:D0PV95 SMR:D0PV95 GeneID:190611
KEGG:cel:CELE_Y71H2AM.19 CTD:190611 WormBase:Y71H2AM.19b
ArrayExpress:D0PV95 Uniprot:D0PV95
Length = 708
Score = 153 (58.9 bits), Expect = 2.0e-09, P = 2.0e-09
Identities = 30/76 (39%), Positives = 44/76 (57%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ +G +VP P+ F LS ++ N+ GY PTP+Q+ +IP L R+ +C
Sbjct: 219 VEATGDDVPQPISLFSDLS----LHEWIEENIKTAGYDRPTPVQKYSIPALQGGRDLMSC 274
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P++
Sbjct: 275 AQTGSGKTAAFLVPLV 290
>UNIPROTKB|B7Z5N6 [details] [associations]
symbol:DDX59 "cDNA FLJ56549, highly similar to Homo sapiens
DEAD (Asp-Glu-Ala-Asp) box polypeptide 59 (DDX59), transcript
variant 2, mRNA" species:9606 "Homo sapiens" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL445483 UniGene:Hs.497332 HGNC:HGNC:25360
HOGENOM:HOG000006599 HOVERGEN:HBG106120 OrthoDB:EOG4K9BBZ
EMBL:AK299219 IPI:IPI00514037 SMR:B7Z5N6 Ensembl:ENST00000367348
UCSC:uc010ppl.1 Uniprot:B7Z5N6
Length = 567
Score = 152 (58.6 bits), Expect = 2.5e-09, P = 2.5e-09
Identities = 42/99 (42%), Positives = 53/99 (53%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN Q ++ +++ I V G V P+ F S L NL + GY+ PTPIQ
Sbjct: 175 LNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCS----LPEVLNHNLKKSGYEVPTPIQ 230
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLF 202
Q IPV L R+ A A TGSGKT AFL P++M R LF
Sbjct: 231 MQMIPVGLLGRDILASADTGSGKTAAFLLPVIM--RALF 267
>UNIPROTKB|Q5T1V6 [details] [associations]
symbol:DDX59 "Probable ATP-dependent RNA helicase DDX59"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0005622 "intracellular" evidence=IDA]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0046872
GO:GO:0003723 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 PROSITE:PS51083
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:AL136611 EMBL:AL445483 EMBL:BC014183 EMBL:BC041801
IPI:IPI00010449 IPI:IPI00217157 RefSeq:NP_001026895.2
UniGene:Hs.497332 PDB:2YQP PDBsum:2YQP ProteinModelPortal:Q5T1V6
SMR:Q5T1V6 PhosphoSite:Q5T1V6 DMDM:74762230 PaxDb:Q5T1V6
PRIDE:Q5T1V6 DNASU:83479 Ensembl:ENST00000331314
Ensembl:ENST00000447706 GeneID:83479 KEGG:hsa:83479 UCSC:uc009wzk.3
CTD:83479 GeneCards:GC01M200594 HGNC:HGNC:25360 HPA:HPA047166
neXtProt:NX_Q5T1V6 PharmGKB:PA142672000 HOGENOM:HOG000006599
HOVERGEN:HBG106120 InParanoid:Q5T1V6 OMA:VTRPIID PhylomeDB:Q5T1V6
EvolutionaryTrace:Q5T1V6 GenomeRNAi:83479 NextBio:72419
ArrayExpress:Q5T1V6 Bgee:Q5T1V6 CleanEx:HS_DDX59
Genevestigator:Q5T1V6 Uniprot:Q5T1V6
Length = 619
Score = 152 (58.6 bits), Expect = 2.8e-09, P = 2.8e-09
Identities = 42/99 (42%), Positives = 53/99 (53%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN Q ++ +++ I V G V P+ F S L NL + GY+ PTPIQ
Sbjct: 175 LNLQEDQIENLKQQLGILVQGQEVTRPIIDFEHCS----LPEVLNHNLKKSGYEVPTPIQ 230
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLF 202
Q IPV L R+ A A TGSGKT AFL P++M R LF
Sbjct: 231 MQMIPVGLLGRDILASADTGSGKTAAFLLPVIM--RALF 267
>UNIPROTKB|F1MYC6 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0033391 "chromatoid body"
evidence=IEA] [GO:0032880 "regulation of protein localization"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000237 "leptotene" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0048471
GO:GO:0032880 GO:GO:0007283 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 IPI:IPI00689085 UniGene:Bt.35994
OMA:RDAGESN GO:GO:0000237 EMBL:DAAA02050339 EMBL:DAAA02050337
EMBL:DAAA02050338 EMBL:JX437185 Ensembl:ENSBTAT00000011682
Uniprot:F1MYC6
Length = 729
Score = 152 (58.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++ R+ AC
Sbjct: 278 VEVSGHDPPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMAC 333
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 334 AQTGSGKTAAFLLPIL 349
>UNIPROTKB|Q5W5U4 [details] [associations]
symbol:DDX4 "Probable ATP-dependent RNA helicase DDX4"
species:9913 "Bos taurus" [GO:0033391 "chromatoid body"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISS] [GO:0071547
"piP-body" evidence=ISS] [GO:0071546 "pi-body" evidence=ISS]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IEA]
[GO:0007275 "multicellular organismal development" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0048471 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0071546 GO:GO:0033391 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268804 HOVERGEN:HBG015893 EMBL:AF541971
IPI:IPI00689085 RefSeq:NP_001007820.1 UniGene:Bt.35994
ProteinModelPortal:Q5W5U4 SMR:Q5W5U4 STRING:Q5W5U4 PRIDE:Q5W5U4
GeneID:493725 KEGG:bta:493725 CTD:54514 InParanoid:Q5W5U4 KO:K13982
OrthoDB:EOG4W6NVF NextBio:20865468 GO:GO:0071547 Uniprot:Q5W5U4
Length = 729
Score = 152 (58.6 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 32/76 (42%), Positives = 49/76 (64%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG + P + TF + + C++ L N+A+ GY + TP+Q+ +IP++ R+ AC
Sbjct: 278 VEVSGHDPPPAILTFEEANL---CQT-LNNNIAKAGYTKLTPVQKYSIPIIQGGRDLMAC 333
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P+L
Sbjct: 334 AQTGSGKTAAFLLPIL 349
>UNIPROTKB|F1NL04 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000237 "leptotene" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male meiosis I"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0030317 "sperm motility" evidence=IEA] [GO:0032880 "regulation
of protein localization" evidence=IEA] [GO:0033391 "chromatoid
body" evidence=IEA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0048471 GO:GO:0032880 GO:GO:0003676 GO:GO:0030317
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0033391
GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 GO:GO:0000237 EMBL:AADN02054551
EMBL:AADN02054552 EMBL:AADN02054553 IPI:IPI00578446
Ensembl:ENSGALT00000038830 Uniprot:F1NL04
Length = 542
Score = 151 (58.2 bits), Expect = 4.5e-09, P = 4.5e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ +SG + P+PL F + + F L +N+++ GY + TP+Q+ +IPV+ + R+ +C
Sbjct: 155 VEMSGLDPPAPLLAFEE--ANFA--QTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSC 210
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ ++
Sbjct: 211 AQTGSGKTAAFLLPIVDRM 229
>UNIPROTKB|F1N991 [details] [associations]
symbol:DDX4 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000237 "leptotene"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0007141 "male
meiosis I" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0030317 "sperm motility" evidence=IEA]
[GO:0032880 "regulation of protein localization" evidence=IEA]
[GO:0033391 "chromatoid body" evidence=IEA] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0048471 GO:GO:0032880 GO:GO:0003676
GO:GO:0030317 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0007141 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 GO:GO:0000237
OMA:GINFDKF EMBL:AADN02054551 EMBL:AADN02054552 EMBL:AADN02054553
IPI:IPI00819436 ProteinModelPortal:F1N991
Ensembl:ENSGALT00000023724 Uniprot:F1N991
Length = 568
Score = 151 (58.2 bits), Expect = 4.8e-09, P = 4.8e-09
Identities = 30/79 (37%), Positives = 52/79 (65%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ +SG + P+PL F + + F L +N+++ GY + TP+Q+ +IPV+ + R+ +C
Sbjct: 155 VEMSGLDPPAPLLAFEE--ANFA--QTLRKNISKTGYSKLTPVQKHSIPVIQAGRDLMSC 210
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ ++
Sbjct: 211 AQTGSGKTAAFLLPIVDRM 229
>UNIPROTKB|P25888 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase" species:83333
"Escherichia coli K-12" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0042255 "ribosome assembly" evidence=IGI]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:U00096 EMBL:AP009048
GenomeReviews:AP009048_GR GenomeReviews:U00096_GR GO:GO:0003723
GO:GO:0005840 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0042255 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 EMBL:L02123 HOGENOM:HOG000268807 EMBL:X56307
PIR:E64816 RefSeq:NP_415318.1 RefSeq:YP_489070.1
ProteinModelPortal:P25888 SMR:P25888 DIP:DIP-10697N IntAct:P25888
MINT:MINT-1313387 PRIDE:P25888 EnsemblBacteria:EBESCT00000003075
EnsemblBacteria:EBESCT00000017437 GeneID:12930968 GeneID:945425
KEGG:ecj:Y75_p0770 KEGG:eco:b0797 PATRIC:32116795 EchoBASE:EB1217
EcoGene:EG11235 KO:K11927 OMA:HLIKQHN ProtClustDB:PRK10590
BioCyc:EcoCyc:EG11235-MONOMER BioCyc:ECOL316407:JW0781-MONOMER
Genevestigator:P25888 Uniprot:P25888
Length = 454
Score = 150 (57.9 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 30/57 (52%), Positives = 38/57 (66%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY+EPTPIQ+QAIP +L R+ A A TG+GKT F P+L L
Sbjct: 7 GLSPDILRAVAEQGYREPTPIQQQAIPAVLEGRDLMASAQTGTGKTAGFTLPLLQHL 63
>GENEDB_PFALCIPARUM|PFE0430w [details] [associations]
symbol:PFE0430w "ATP-dependent RNA helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 153 (58.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 53/185 (28%), Positives = 86/185 (46%)
Query: 16 KKKFVTDFARF-KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFN 74
KKK D R K+N NL D + + + +D + + + + E
Sbjct: 602 KKKTEEDMKRNEKDNMNESNLTDSKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENG 661
Query: 75 VFKSSKQLVPAVDKEKE--KVEDGPSKAKKELNKQIERDA-VFRKKY-NIHVSGANVPSP 130
+ K +K+L+ E + ++ KE+ + D +FRK NI V G N P P
Sbjct: 662 MKKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRP 721
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
++ F + G S +L+ L + +K+ IQ Q IP L+ R+ A A TGSGKTL++
Sbjct: 722 VQYFYQC----GLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSY 777
Query: 191 LCPML 195
L P++
Sbjct: 778 LFPVI 782
>UNIPROTKB|Q8I416 [details] [associations]
symbol:PFE0430w "ATP-dependent RNA Helicase, putative"
species:36329 "Plasmodium falciparum 3D7" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 EMBL:AL844504
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K12811
RefSeq:XP_001351645.1 ProteinModelPortal:Q8I416 IntAct:Q8I416
MINT:MINT-1560531 EnsemblProtists:PFE0430w:mRNA GeneID:812854
KEGG:pfa:PFE0430w EuPathDB:PlasmoDB:PF3D7_0508700
HOGENOM:HOG000284107 ProtClustDB:CLSZ2433224 Uniprot:Q8I416
Length = 1490
Score = 153 (58.9 bits), Expect = 5.2e-09, P = 5.2e-09
Identities = 53/185 (28%), Positives = 86/185 (46%)
Query: 16 KKKFVTDFARF-KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFN 74
KKK D R K+N NL D + + + +D + + + + E
Sbjct: 602 KKKTEEDMKRNEKDNMNESNLTDSKNKKQNKGSDASFSSSDDTDDKLSSNKSELNYEENG 661
Query: 75 VFKSSKQLVPAVDKEKE--KVEDGPSKAKKELNKQIERDA-VFRKKY-NIHVSGANVPSP 130
+ K +K+L+ E + ++ KE+ + D +FRK NI V G N P P
Sbjct: 662 MKKMNKKLLEVNHDEIDYIPIKKNIYVQVKEITNMKDSDVDMFRKNNGNIIVRGKNCPRP 721
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
++ F + G S +L+ L + +K+ IQ Q IP L+ R+ A A TGSGKTL++
Sbjct: 722 VQYFYQC----GLPSKILQILEKKNFKKMYNIQMQTIPALMCGRDVIAIAETGSGKTLSY 777
Query: 191 LCPML 195
L P++
Sbjct: 778 LFPVI 782
>POMBASE|SPCC10H11.01 [details] [associations]
symbol:prp11 "ATP-dependent RNA helicase Prp11"
species:4896 "Schizosaccharomyces pombe" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA] [GO:0005681
"spliceosomal complex" evidence=ISO] [GO:0005829 "cytosol"
evidence=IDA] [GO:0044732 "mitotic spindle pole body" evidence=IDA]
[GO:0045292 "mRNA cis splicing, via spliceosome" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 PomBase:SPCC10H11.01 GO:GO:0005829 GO:GO:0005524
EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0044732 GO:GO:0005681
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 GO:GO:0045292 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K12811 HOGENOM:HOG000007229 EMBL:AB027964
RefSeq:NP_587856.1 ProteinModelPortal:Q9P7C7 DIP:DIP-59804N
IntAct:Q9P7C7 PRIDE:Q9P7C7 EnsemblFungi:SPCC10H11.01.1
GeneID:2538936 KEGG:spo:SPCC10H11.01 OMA:SLVIIYN OrthoDB:EOG40CMR1
NextBio:20800113 Uniprot:Q9P7C7
Length = 1014
Score = 152 (58.6 bits), Expect = 5.6e-09, P = 5.6e-09
Identities = 43/128 (33%), Positives = 64/128 (50%)
Query: 77 KSSKQLVPAVDKEKEKVEDGPSK--AKKELNKQI---ERDAVFRKKYNIHVSGANVPSPL 131
+S K+ V VD K ED + E K + E D + I + G + P P+
Sbjct: 358 RSKKKDVITVDHSKINYEDFKKDFYVEPEELKNLSPAEVDELRASLDGIKIRGIDCPKPV 417
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
++ S+ G + + + LGY++PT IQ QAIP + S R+ A TGSGKT+AFL
Sbjct: 418 TSW----SQCGLSAQTISVINSLGYEKPTSIQAQAIPAITSGRDVIGVAKTGSGKTIAFL 473
Query: 192 CPMLMKLR 199
PM ++
Sbjct: 474 LPMFRHIK 481
>UNIPROTKB|B2C6E9 [details] [associations]
symbol:B2C6E9 "VASA" species:9337 "Trichosurus vulpecula"
[GO:0033391 "chromatoid body" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0033391 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
HOVERGEN:HBG015893 EMBL:EU278597 Uniprot:B2C6E9
Length = 704
Score = 151 (58.2 bits), Expect = 6.6e-09, P = 6.6e-09
Identities = 45/140 (32%), Positives = 71/140 (50%)
Query: 63 KSIAGETVEGF--NVFKSSKQLVPAVDKEKEKVE--DGPSKAKKELNKQIERDAVFRKKY 118
K + E V G N +KS + + D + KV P +E + + KY
Sbjct: 190 KGLNEEVVAGSGRNPWKSETEGGESGDIQGPKVTYIPPPPPENEEATFAHYQTGINFDKY 249
Query: 119 N---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
+ + VSG + P + TF + C++ L ++ + GY + TP+Q+ IP++L+ R+
Sbjct: 250 DTILVEVSGHDAPPAILTFEETDL---CQT-LNNDITKAGYTKLTPVQKYGIPIILAGRD 305
Query: 176 CFACAPTGSGKTLAFLCPML 195
ACA TGSGKT AFL P+L
Sbjct: 306 LMACAQTGSGKTAAFLLPIL 325
>WB|WBGene00022148 [details] [associations]
symbol:Y71G12B.8 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:FO080942 RefSeq:NP_490891.2
ProteinModelPortal:Q95XM9 SMR:Q95XM9 PaxDb:Q95XM9
EnsemblMetazoa:Y71G12B.8 GeneID:171743 KEGG:cel:CELE_Y71G12B.8
UCSC:Y71G12B.8 CTD:171743 WormBase:Y71G12B.8 InParanoid:Q95XM9
OMA:ETDREAM NextBio:872509 Uniprot:Q95XM9
Length = 739
Score = 151 (58.2 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 56/206 (27%), Positives = 95/206 (46%)
Query: 20 VTDFARFKENKESENLADDFSFVEGEKT--DPE-KAMVSFVKKRKRKSIAGETVEGFNVF 76
VT + K +E A DF F G+ D E + + ++KK+ S+ + E +
Sbjct: 16 VTVRKKKKMANAAEEFAQDFIFESGDTQFIDRETEDLQKYLKKQTPTSLDEKIAEMRKLK 75
Query: 77 KSSKQLVPAVDKEKEKVEDGPSKAK--KELNKQIERDAVFRKKY---------NIHVSGA 125
+ K ++ + E + E+ + ++L + RD V K+ N A
Sbjct: 76 NTGKAVIVEDEAEAAEAEEKDEEEDDVQQLGGKETRDTVREKRKSGKSKKSQENEDFFSA 135
Query: 126 NVPSP-LRTFVKLS-SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
+ L T V +S + +L+ + GY +PTPIQ+ IPV L+ ++ ACA TG
Sbjct: 136 LIDGKSLDTSVNVSFEQMNLSRQILKACSGAGYSDPTPIQQACIPVALTGKDICACAATG 195
Query: 184 SGKTLAFLCPMLMKLRVLFIPFDYFC 209
+GKT AF+ P+L R+++ P C
Sbjct: 196 TGKTAAFVLPILE--RMIYRPKGASC 219
>UNIPROTKB|C9J081 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR011545 Pfam:PF00270
GO:GO:0005524 GO:GO:0005737 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2699 EMBL:AC004474
IPI:IPI00646152 HOGENOM:HOG000203858 ProteinModelPortal:C9J081
SMR:C9J081 STRING:C9J081 PRIDE:C9J081 Ensembl:ENST00000440554
ArrayExpress:C9J081 Bgee:C9J081 Uniprot:C9J081
Length = 250
Score = 145 (56.1 bits), Expect = 7.1e-09, P = 7.1e-09
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G+N P + F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 156 EKYDDIPVEATGSNCPPHIENFSDID--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKG 211
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 212 KRDLMACAQTGSGKTAAFLLPILSQI 237
>FB|FBgn0263231 [details] [associations]
symbol:bel "belle" species:7227 "Drosophila melanogaster"
[GO:0007286 "spermatid development" evidence=IMP] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS;IMP] [GO:0005524
"ATP binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0043186 "P granule" evidence=IDA] [GO:0007283
"spermatogenesis" evidence=IMP] [GO:0002168 "instar larval
development" evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP]
[GO:0016442 "RNA-induced silencing complex" evidence=IDA]
[GO:0016246 "RNA interference" evidence=IMP] [GO:0005811 "lipid
particle" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005875 "microtubule associated complex" evidence=IDA]
[GO:0043025 "neuronal cell body" evidence=IDA] [GO:0010468
"regulation of gene expression" evidence=IMP] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE014297
GO:GO:0005524 GO:GO:0005875 GO:GO:0016246 GO:GO:0007286
GO:GO:0005811 GO:GO:0043025 GO:GO:0048477 GO:GO:0003723
GO:GO:0000070 GO:GO:0016442 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 GO:GO:0002168 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 KO:K11594 HSSP:P09052 EMBL:AY089613
RefSeq:NP_536783.1 UniGene:Dm.7823 ProteinModelPortal:Q9VHP0
SMR:Q9VHP0 IntAct:Q9VHP0 STRING:Q9VHP0 PaxDb:Q9VHP0 PRIDE:Q9VHP0
EnsemblMetazoa:FBtr0081888 GeneID:45826 KEGG:dme:Dmel_CG9748
UCSC:CG9748-RA CTD:100035747 FlyBase:FBgn0263231 InParanoid:Q9VHP0
OMA:TILWVYE OrthoDB:EOG4DNCKG PhylomeDB:Q9VHP0 GenomeRNAi:45826
NextBio:838377 Bgee:Q9VHP0 Uniprot:Q9VHP0
Length = 798
Score = 151 (58.2 bits), Expect = 7.9e-09, P = 7.9e-09
Identities = 30/79 (37%), Positives = 48/79 (60%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ +G NVP + +F + + N+A Y +PTP+Q+ AIP++++ R+ AC
Sbjct: 283 VEATGQNVPPNITSFDDVQ----LTEIIRNNVALARYDKPTPVQKHAIPIIINGRDLMAC 338
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L ++
Sbjct: 339 AQTGSGKTAAFLVPILNQM 357
>SGD|S000006040 [details] [associations]
symbol:DBP1 "Putative ATP-dependent RNA helicase of the
DEAD-box protein family" species:4932 "Saccharomyces cerevisiae"
[GO:0005737 "cytoplasm" evidence=IEA;IDA] [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0003724 "RNA
helicase activity" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0003743
"translation initiation factor activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006412 "translation" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000006040 GO:GO:0005524
GO:GO:0005737 GO:GO:0006413 EMBL:BK006949 GO:GO:0003743 EMBL:U43503
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
EMBL:X55993 PIR:S62003 RefSeq:NP_015206.1 ProteinModelPortal:P24784
SMR:P24784 DIP:DIP-2576N IntAct:P24784 MINT:MINT-426870
STRING:P24784 PaxDb:P24784 EnsemblFungi:YPL119C GeneID:855984
KEGG:sce:YPL119C CYGD:YPL119c GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OMA:DELLMEN OrthoDB:EOG4XPTQ4
NextBio:980825 Genevestigator:P24784 GermOnline:YPL119C
Uniprot:P24784
Length = 617
Score = 150 (57.9 bits), Expect = 8.1e-09, P = 8.1e-09
Identities = 56/187 (29%), Positives = 82/187 (43%)
Query: 23 FARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSS-KQ 81
F R +E + DF G +T F K+R + A G + +KSS +
Sbjct: 40 FERSTPKQEDKVTGGDFFRRAGRQTGNNGGFFGFSKERNGGTSANYNRGGSSNYKSSGNR 99
Query: 82 LVPAVDKEKEKVEDGPSKAKKELNK-QIERDAVFRK---KY----NIHV--SGANVPSPL 131
V K GP AK E + D + K+ NI V SG +VP P+
Sbjct: 100 WVNG------KHIPGPKNAKLEAELFGVHDDPDYHSSGIKFDNYDNIPVDASGKDVPEPI 153
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
F S + L+ N+ + +PTP+Q+ +IP++ R+ ACA TGSGKT FL
Sbjct: 154 LDF----SSPPLDELLMENIKLASFTKPTPVQKYSIPIVTKGRDLMACAQTGSGKTGGFL 209
Query: 192 CPMLMKL 198
P+ +L
Sbjct: 210 FPLFTEL 216
>WB|WBGene00013214 [details] [associations]
symbol:Y54G11A.3 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008152 "metabolic process" evidence=IEA]
[GO:0016491 "oxidoreductase activity" evidence=IEA] [GO:0055114
"oxidation-reduction process" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 EMBL:AL034488 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 GeneTree:ENSGT00660000095174
HSSP:P10081 PIR:T27176 RefSeq:NP_496973.1 ProteinModelPortal:Q9XVZ6
SMR:Q9XVZ6 STRING:Q9XVZ6 PaxDb:Q9XVZ6 EnsemblMetazoa:Y54G11A.3
GeneID:175083 KEGG:cel:CELE_Y54G11A.3 UCSC:Y54G11A.3 CTD:175083
WormBase:Y54G11A.3 InParanoid:Q9XVZ6 OMA:NGFEKPS NextBio:886680
Uniprot:Q9XVZ6
Length = 504
Score = 149 (57.5 bits), Expect = 9.8e-09, P = 9.8e-09
Identities = 29/76 (38%), Positives = 47/76 (61%)
Query: 123 SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
S +P P+ +F FG + ++ + + G+++P+PIQ Q P+LLS ++C + T
Sbjct: 74 STVKIPPPVNSF---EQAFGSNASIMGEIRKNGFEKPSPIQSQMWPLLLSGQDCIGVSQT 130
Query: 183 GSGKTLAFLCPMLMKL 198
GSGKTLAFL P L+ +
Sbjct: 131 GSGKTLAFLLPALLHI 146
>UNIPROTKB|A4QSS5 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase DBP2"
species:242507 "Magnaporthe oryzae 70-15" [GO:0043581 "mycelium
development" evidence=IEP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000184 EMBL:CM001233 GO:GO:0003723
GO:GO:0043581 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 OrthoDB:EOG47SWP6 RefSeq:XP_003712846.1
ProteinModelPortal:A4QSS5 EnsemblFungi:MGG_16901T0 GeneID:12985738
KEGG:mgr:MGG_16901 Uniprot:A4QSS5
Length = 548
Score = 149 (57.5 bits), Expect = 1.1e-08, P = 1.1e-08
Identities = 41/127 (32%), Positives = 64/127 (50%)
Query: 83 VPAVDK-EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRF 141
+ A+ K EK ++ P + Q E D FR+++++ V G++VP P+ TF
Sbjct: 79 INALPKFEKHFYKEHPDVTNRS---QAEVDK-FRREHSMAVQGSDVPKPVETF----DEA 130
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV- 200
G Y++ + G+ PT IQ Q P+ LS R+ A TGSGKTL + P ++ +
Sbjct: 131 GFPRYVMDEVKAQGFPAPTAIQSQGWPMALSGRDVVGIAETGSGKTLTYCLPAIVHINAQ 190
Query: 201 -LFIPFD 206
L P D
Sbjct: 191 PLLAPGD 197
>ASPGD|ASPL0000054300 [details] [associations]
symbol:AN0583 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005730 EMBL:BN001308 EMBL:AACD01000007 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 RefSeq:XP_658187.1 ProteinModelPortal:Q5BFU7
STRING:Q5BFU7 EnsemblFungi:CADANIAT00002094 GeneID:2876361
KEGG:ani:AN0583.2 HOGENOM:HOG000246455 OMA:HLKVEMN
OrthoDB:EOG4JWZP1 Uniprot:Q5BFU7
Length = 936
Score = 150 (57.9 bits), Expect = 1.4e-08, P = 1.4e-08
Identities = 39/96 (40%), Positives = 55/96 (57%)
Query: 109 ERDAVF--RKKYNIHVSGANVPSPLRTFVKLSSRF---GCESYLLRNLAELGYKEPTPIQ 163
E D F K+ + + AN+ RT VK F G + LL+ +A G+ PTPIQ
Sbjct: 62 EDDEAFIAEKQTSANRKSANLKG--RT-VKKGGGFQAMGLNANLLKAIARKGFSVPTPIQ 118
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ IPV++ D++ A TGSGKT AF+ PM+ KL+
Sbjct: 119 RKTIPVIMEDQDVVGMARTGSGKTAAFVIPMIEKLK 154
>TIGR_CMR|CPS_3401 [details] [associations]
symbol:CPS_3401 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_270076.1 ProteinModelPortal:Q47YP4
STRING:Q47YP4 GeneID:3521057 KEGG:cps:CPS_3401 PATRIC:21469753
OMA:HLIKEHQ ProtClustDB:CLSK907013
BioCyc:CPSY167879:GI48-3430-MONOMER Uniprot:Q47YP4
Length = 432
Score = 147 (56.8 bits), Expect = 1.5e-08, P = 1.5e-08
Identities = 37/73 (50%), Positives = 45/73 (61%)
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
V +P TF +L G + LL LAEL Y +PTPIQ +AIP + + R+ A A TGSGK
Sbjct: 4 VTTPA-TFTEL----GLITPLLARLAELEYHQPTPIQARAIPSVFAGRDLIAGANTGSGK 58
Query: 187 TLAFLCPMLMKLR 199
T F PML KLR
Sbjct: 59 TATFALPMLQKLR 71
>UNIPROTKB|Q47Z59 [details] [associations]
symbol:CPS_3215 "Putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0042254
"ribosome biogenesis" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 147 (56.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S FG +S L+ + +G+ EPT IQ+QAIP ++ + A + TGSGKTLAF+ P L +L
Sbjct: 4 SDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQRL 63
>TIGR_CMR|CPS_3215 [details] [associations]
symbol:CPS_3215 "putative ATP-dependent RNA helicase SrmB"
species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0008186
"RNA-dependent ATPase activity" evidence=ISS] [GO:0042254 "ribosome
biogenesis" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0042254 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_269911.1 ProteinModelPortal:Q47Z59
STRING:Q47Z59 GeneID:3520324 KEGG:cps:CPS_3215 PATRIC:21469413
OMA:PKFIVAT ProtClustDB:CLSK869483
BioCyc:CPSY167879:GI48-3264-MONOMER Uniprot:Q47Z59
Length = 448
Score = 147 (56.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S FG +S L+ + +G+ EPT IQ+QAIP ++ + A + TGSGKTLAF+ P L +L
Sbjct: 4 SDFGLDSALMSTIEHMGFNEPTQIQQQAIPAAMAGHDLIASSKTGSGKTLAFIIPALQRL 63
>UNIPROTKB|Q9KNA4 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS] [GO:0016070 "RNA metabolic process" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE003853
GenomeReviews:AE003853_GR GO:GO:0016070 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT ProtClustDB:CLSK869483
PIR:C82506 RefSeq:NP_232462.1 ProteinModelPortal:Q9KNA4
DNASU:2612119 GeneID:2612119 KEGG:vch:VCA0061 PATRIC:20084709
Uniprot:Q9KNA4
Length = 452
Score = 147 (56.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
G ++ LL+NLA +K+ T IQ+QAIP+ ++ R+ A + TGSGKTLAF+ PML K
Sbjct: 11 GLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
>TIGR_CMR|VC_A0061 [details] [associations]
symbol:VC_A0061 "ATP-dependent RNA helicase, DEAD box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 OMA:PKFIVAT
ProtClustDB:CLSK869483 PIR:C82506 RefSeq:NP_232462.1
ProteinModelPortal:Q9KNA4 DNASU:2612119 GeneID:2612119
KEGG:vch:VCA0061 PATRIC:20084709 Uniprot:Q9KNA4
Length = 452
Score = 147 (56.8 bits), Expect = 1.6e-08, P = 1.6e-08
Identities = 29/56 (51%), Positives = 41/56 (73%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
G ++ LL+NLA +K+ T IQ+QAIP+ ++ R+ A + TGSGKTLAF+ PML K
Sbjct: 11 GLDNRLLKNLAHYNFKQATEIQQQAIPLTIAGRDLLASSKTGSGKTLAFVLPMLHK 66
>UNIPROTKB|F8VRX4 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR011545 Pfam:PF00270 PROSITE:PS00039
GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
EMBL:AC089999 HGNC:HGNC:20084 ChiTaRS:DDX54 IPI:IPI01022245
ProteinModelPortal:F8VRX4 SMR:F8VRX4 Ensembl:ENST00000552375
ArrayExpress:F8VRX4 Bgee:F8VRX4 Uniprot:F8VRX4
Length = 208
Score = 139 (54.0 bits), Expect = 1.7e-08, P = 1.7e-08
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT FL PM +L+
Sbjct: 21 SYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLK 76
>UNIPROTKB|Q8EE19 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
S+ G S L++ + ELGY+ PTPIQ QAIP +L+ + A A TG+GKT +F+ P+L
Sbjct: 4 SQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60
>TIGR_CMR|SO_2571 [details] [associations]
symbol:SO_2571 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:NP_718157.1 ProteinModelPortal:Q8EE19
GeneID:1170275 KEGG:son:SO_2571 PATRIC:23524769
ProtClustDB:CLSK906777 Uniprot:Q8EE19
Length = 475
Score = 147 (56.8 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 28/57 (49%), Positives = 40/57 (70%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
S+ G S L++ + ELGY+ PTPIQ QAIP +L+ + A A TG+GKT +F+ P+L
Sbjct: 4 SQLGLHSALVKAVTELGYQSPTPIQTQAIPSILAGKNVLAAAQTGTGKTASFVLPLL 60
>SGD|S000000346 [details] [associations]
symbol:MAK5 "Essential nucleolar protein" species:4932
"Saccharomyces cerevisiae" [GO:0000466 "maturation of 5.8S rRNA
from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000463 "maturation of LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0042273 "ribosomal large subunit biogenesis" evidence=IMP]
[GO:0042254 "ribosome biogenesis" evidence=IEA] [GO:0006364 "rRNA
processing" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA;IDA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000000346 GO:GO:0005524 GO:GO:0005730
EMBL:BK006936 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000463 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000466 KO:K14805
HOGENOM:HOG000290702 GeneTree:ENSGT00550000074847 EMBL:X78937
OrthoDB:EOG44J5S7 EMBL:Z36011 PIR:S46011 RefSeq:NP_009700.1
ProteinModelPortal:P38112 SMR:P38112 DIP:DIP-6337N IntAct:P38112
MINT:MINT-612928 STRING:P38112 PaxDb:P38112 PeptideAtlas:P38112
EnsemblFungi:YBR142W GeneID:852439 KEGG:sce:YBR142W CYGD:YBR142w
OMA:HLPRAAD NextBio:971336 Genevestigator:P38112 GermOnline:YBR142W
Uniprot:P38112
Length = 773
Score = 149 (57.5 bits), Expect = 1.8e-08, P = 1.8e-08
Identities = 53/186 (28%), Positives = 88/186 (47%)
Query: 16 KKKFVTDF-ARFKENKESENLADDFSFVEGEK-TDPEKAMVSFVKKRKRKSIAGETVEGF 73
K FVT ++ ++ E + DD VE E +D E ++ F K GE
Sbjct: 60 KVTFVTKKDSKVLKDSNKEKVGDDQESVENESGSDSESELLEFKNLDDIKE--GELSAAS 117
Query: 74 NVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIH-VSGANVPSPLR 132
+ SS + + E K+ D +++++ + ++ VF K NI +S N+P
Sbjct: 118 --YSSSDEDEQG-NIESSKLTDPSEDVDEDVDEDVLKENVFNKDINIDDISPVNLPE-WT 173
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
LS +L++L L + PT IQ+++IPV++ + A TGSGKTLA+
Sbjct: 174 NLAPLSMT------ILQSLQNLNFLRPTEIQKKSIPVIMQGVDVMGKASTGSGKTLAYGI 227
Query: 193 PMLMKL 198
P++ KL
Sbjct: 228 PIVEKL 233
>UNIPROTKB|Q96GQ7 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
CTD:55661 HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH EMBL:AY044431
EMBL:AF336851 EMBL:AL049766 EMBL:AL357560 EMBL:BC009304
EMBL:BC011927 EMBL:BC016060 EMBL:BC126287 EMBL:BC130275
EMBL:BC144125 EMBL:AK022979 EMBL:AK000603 EMBL:AF193054
EMBL:AF161377 IPI:IPI00293078 RefSeq:NP_060365.7 UniGene:Hs.129261
UniGene:Hs.65234 ProteinModelPortal:Q96GQ7 SMR:Q96GQ7 IntAct:Q96GQ7
MINT:MINT-1420816 STRING:Q96GQ7 PhosphoSite:Q96GQ7 DMDM:29427946
SWISS-2DPAGE:Q96GQ7 PaxDb:Q96GQ7 PeptideAtlas:Q96GQ7 PRIDE:Q96GQ7
DNASU:55661 Ensembl:ENST00000371764 GeneID:55661 KEGG:hsa:55661
UCSC:uc002xuh.3 GeneCards:GC20P047835 HGNC:HGNC:15837 HPA:HPA047087
neXtProt:NX_Q96GQ7 PharmGKB:PA27213 InParanoid:Q96GQ7
OrthoDB:EOG4NVZJV PhylomeDB:Q96GQ7 ChiTaRS:DDX27 GenomeRNAi:55661
NextBio:60399 ArrayExpress:Q96GQ7 Bgee:Q96GQ7 CleanEx:HS_DDX27
Genevestigator:Q96GQ7 GermOnline:ENSG00000124228 Uniprot:Q96GQ7
Length = 796
Score = 136 (52.9 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 229 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 280
Score = 54 (24.1 bits), Expect = 2.1e-08, Sum P(2) = 2.1e-08
Identities = 18/57 (31%), Positives = 28/57 (49%)
Query: 27 KENKE--SENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
+EN E SE+ A + + ++ KA VK RK+K G+ GF F+ + Q
Sbjct: 159 QENDEEGSEDEASETDYSSADENILTKADTLKVKDRKKKKKKGQEAGGF--FEDASQ 213
Score = 53 (23.7 bits), Expect = 2.7e-08, Sum P(2) = 2.7e-08
Identities = 23/85 (27%), Positives = 40/85 (47%)
Query: 32 SENLADDFSFVEGEKT-DPEKAM---VSFVKKRKRKSIAGETVEGFNVFKSS--KQLVPA 85
S + DF F E E T D A+ +S +KK++ + E +E + + K+
Sbjct: 79 SADFNPDFVFTEKEGTYDGSWALADVMSQLKKKRAATTLDEKIEKVRKKRKTEDKEAKSG 138
Query: 86 -VDKEKEKVEDGPSKAKKELNKQIE 109
++KEKE E K +++L + E
Sbjct: 139 KLEKEKEAKEGSEPKEQEDLQENDE 163
>ZFIN|ZDB-GENE-030131-18 [details] [associations]
symbol:si:dkey-156n14.5 "si:dkey-156n14.5"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-18 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
KO:K13178 EMBL:CR626864 IPI:IPI00896916 RefSeq:XP_001923830.1
UniGene:Dr.75535 Ensembl:ENSDART00000129202 GeneID:556764
KEGG:dre:556764 NextBio:20881652 ArrayExpress:F1QBS1 Bgee:F1QBS1
Uniprot:F1QBS1
Length = 671
Score = 148 (57.2 bits), Expect = 2.2e-08, P = 2.2e-08
Identities = 33/85 (38%), Positives = 50/85 (58%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R+K I V G+ P P+ F + ++F Y++ L + +KEPT IQ Q P+ LS
Sbjct: 77 YRRKREITVRGSGCPKPVTNFHQ--AQF--PQYVMDVLLQQNFKEPTAIQAQGFPLALSG 132
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 133 RDMVGIAQTGSGKTLAYLLPAIVHI 157
>UNIPROTKB|F1Q073 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AAEX03013992
Ensembl:ENSCAFT00000018089 Uniprot:F1Q073
Length = 767
Score = 136 (52.9 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 198 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 249
Score = 53 (23.7 bits), Expect = 2.5e-08, Sum P(2) = 2.5e-08
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 28 ENKESENLADDFSFVEGEKT-DPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAV 86
+ S + DF F E E D AM + + K+K A E + ++
Sbjct: 44 QKNRSADFNPDFVFTEKEGAYDGSWAMADVMSQLKKKRAATTLDEKIEKVRKKRK---TE 100
Query: 87 DKEKE--KVEDGPSKAKKELNKQIERD 111
DKE + K E+ +K EL +Q + +
Sbjct: 101 DKEAKSGKSEEKEAKEGSELEEQEDHE 127
Score = 43 (20.2 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 15/55 (27%), Positives = 24/55 (43%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
+E E E+ D+S + VK+RK+K G+ GF F+ + Q
Sbjct: 131 EEGPEDEDSETDYSSADENILTKAATDTLKVKERKKKK-KGQETGGF--FEDASQ 182
>ZFIN|ZDB-GENE-050208-665 [details] [associations]
symbol:ddx59 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 59" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-050208-665 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:BX649292
IPI:IPI00786758 Ensembl:ENSDART00000105600 Bgee:F1R8P9
Uniprot:F1R8P9
Length = 584
Score = 147 (56.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 39/92 (42%), Positives = 53/92 (57%)
Query: 106 KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
+QIER + + I G V P+ F RF + L RNL GY+ PTP+Q Q
Sbjct: 147 EQIER---VKAELGIVSVGTEVCRPVIEFQHC--RF--PTVLERNLKAAGYEAPTPVQMQ 199
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
+PV L+ R+ A A TGSGKT+AFL P++M+
Sbjct: 200 MVPVGLTGRDVIATADTGSGKTVAFLLPVVMR 231
>SGD|S000002651 [details] [associations]
symbol:PRP28 "RNA helicase in the DEAD-box family"
species:4932 "Saccharomyces cerevisiae" [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=TAS] [GO:0005681 "spliceosomal
complex" evidence=TAS] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006397
"mRNA processing" evidence=IEA] [GO:0008380 "RNA splicing"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0000354 "cis
assembly of pre-catalytic spliceosome" evidence=TAS] [GO:0005682
"U5 snRNP" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000002651 GO:GO:0005524
GO:GO:0005737 EMBL:BK006938 GO:GO:0005681 GO:GO:0005682
GO:GO:0003676 EMBL:Z49701 GeneTree:ENSGT00690000102171
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 GO:GO:0000354
RefSeq:NP_010529.3 GeneID:851830 KEGG:sce:YDR243C KO:K12858
HOGENOM:HOG000268796 OrthoDB:EOG4KPXK0 EMBL:X56934 PIR:A39624
RefSeq:NP_878065.3 ProteinModelPortal:P23394 SMR:P23394
DIP:DIP-6324N IntAct:P23394 MINT:MINT-599541 STRING:P23394
PaxDb:P23394 PeptideAtlas:P23394 EnsemblFungi:YDR243C
GeneID:1466436 KEGG:sce:YDR246W-A CYGD:YDR243c OMA:HEMNERD
NextBio:969715 Genevestigator:P23394 GermOnline:YDR243C
Uniprot:P23394
Length = 588
Score = 147 (56.8 bits), Expect = 2.5e-08, P = 2.5e-08
Identities = 57/177 (32%), Positives = 87/177 (49%)
Query: 34 NLADDFSFVE--GEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSK--QLVPAVDKE 89
N DD F E +K +P K S K + + +T+ G++ S++ L+
Sbjct: 68 NSRDDSFFNETNDKKRNPSKQNGS--KFHFSWNESEDTLSGYDPIVSTRAIDLLWKGKTP 125
Query: 90 KEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K E G +K L++ ERD + ++ Y I G V +PLR + +L+
Sbjct: 126 KNAAESSYMGKHWTEKSLHEMNERDWRILKEDYAIVTKGGTVENPLRNWEELNI---IPR 182
Query: 146 YLLRNLA-ELGYKEPTPIQRQAIPVLLSD---RECFACAPTGSGKTLAFLCPMLMKL 198
LLR + EL + PTPIQR IP + + R+ A TGSGKTLAF+ P+L+K+
Sbjct: 183 DLLRVIIQELRFPSPTPIQRITIPNVCNMKQYRDFLGVASTGSGKTLAFVIPILIKM 239
>UNIPROTKB|J9P9C6 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 OMA:TRTFTDH EMBL:AAEX03013992
Ensembl:ENSCAFT00000046251 Uniprot:J9P9C6
Length = 788
Score = 136 (52.9 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 219 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 270
Score = 53 (23.7 bits), Expect = 2.6e-08, Sum P(2) = 2.6e-08
Identities = 22/87 (25%), Positives = 36/87 (41%)
Query: 28 ENKESENLADDFSFVEGEKT-DPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAV 86
+ S + DF F E E D AM + + K+K A E + ++
Sbjct: 67 QKNRSADFNPDFVFTEKEGAYDGSWAMADVMSQLKKKRAATTLDEKIEKVRKKRK---TE 123
Query: 87 DKEKE--KVEDGPSKAKKELNKQIERD 111
DKE + K E+ +K EL +Q + +
Sbjct: 124 DKEAKSGKSEEKEAKEGSELEEQEDHE 150
Score = 47 (21.6 bits), Expect = 1.1e-07, Sum P(2) = 1.1e-07
Identities = 18/57 (31%), Positives = 26/57 (45%)
Query: 28 ENKESENLADDFSFVEGEKTDPE---KAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
E K+ E D+ S + D KA VK+RK+K G+ GF F+ + Q
Sbjct: 150 EGKDEEGPEDEDSETDYSSADENILTKADTLKVKERKKKK-KGQETGGF--FEDASQ 203
>MGI|MGI:1915247 [details] [associations]
symbol:Ddx59 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 59"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 MGI:MGI:1915247
GO:GO:0005524 GO:GO:0046872 GO:GO:0003723 GO:GO:0005622
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529
Pfam:PF04438 PROSITE:PS51083 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HSSP:P09052
GeneTree:ENSGT00610000086076 CTD:83479 HOGENOM:HOG000006599
HOVERGEN:HBG106120 OMA:VTRPIID EMBL:AK004833 EMBL:AK013179
EMBL:AK076462 EMBL:BC023840 IPI:IPI00119928 IPI:IPI00226119
RefSeq:NP_080776.1 UniGene:Mm.385462 UniGene:Mm.486546
ProteinModelPortal:Q9DBN9 SMR:Q9DBN9 PhosphoSite:Q9DBN9
PRIDE:Q9DBN9 Ensembl:ENSMUST00000027655 GeneID:67997 KEGG:mmu:67997
UCSC:uc007cut.1 UCSC:uc007cuu.2 InParanoid:Q9DBN9 OrthoDB:EOG4K9BBZ
ChiTaRS:DDX59 NextBio:326168 Bgee:Q9DBN9 CleanEx:MM_DDX59
Genevestigator:Q9DBN9 Uniprot:Q9DBN9
Length = 619
Score = 147 (56.8 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 38/91 (41%), Positives = 51/91 (56%)
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
QIE +++ I V G +V P+ F G L +NL + GY+ PTPIQ Q
Sbjct: 181 QIE---TLKQQLGISVQGQDVARPIIDF----EHCGFPETLNQNLKKSGYEVPTPIQMQM 233
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
IPV L R+ A A TGSGKT AFL P++++
Sbjct: 234 IPVGLLGRDILASADTGSGKTAAFLLPVIIR 264
>UNIPROTKB|F1NA53 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 EMBL:AADN02071779 EMBL:AADN02071780
IPI:IPI00684751 ProteinModelPortal:F1NA53
Ensembl:ENSGALT00000004949 ArrayExpress:F1NA53 Uniprot:F1NA53
Length = 402
Score = 145 (56.1 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
G +L+ ++G PTP+Q IP +L R+C CA TGSGKT AF+ P+L L
Sbjct: 8 GLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSE- 66
Query: 202 FIPFDYFC 209
P+ FC
Sbjct: 67 -DPYGIFC 73
>UNIPROTKB|F1NIX2 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 EMBL:AADN02011031 IPI:IPI00579247
Ensembl:ENSGALT00000026171 ArrayExpress:F1NIX2 Uniprot:F1NIX2
Length = 636
Score = 147 (56.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 87 DKEKEKVEDGPSKAKKELNKQI---ERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSR 140
DK E P + L +++ + +KY+ + +G+N P + +F +
Sbjct: 105 DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVD-- 162
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G ++ N+ Y PTP+Q+ AIP++ R+ ACA TGSGKT AFL P+L ++
Sbjct: 163 MG--EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 218
>UNIPROTKB|F1NIX1 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AADN02011031
IPI:IPI00822944 Ensembl:ENSGALT00000026172 ArrayExpress:F1NIX1
Uniprot:F1NIX1
Length = 638
Score = 147 (56.8 bits), Expect = 2.8e-08, P = 2.8e-08
Identities = 36/118 (30%), Positives = 60/118 (50%)
Query: 87 DKEKEKVEDGPSKAKKELNKQI---ERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSR 140
DK E P + L +++ + +KY+ + +G+N P + +F +
Sbjct: 107 DKSDEDDWSKPLPPSERLEQELFSGSNTGINFEKYDDIPVEATGSNCPPHIESFSDVD-- 164
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G ++ N+ Y PTP+Q+ AIP++ R+ ACA TGSGKT AFL P+L ++
Sbjct: 165 MG--EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAFLLPILSQI 220
>UNIPROTKB|D3IVZ2 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 EMBL:DAAA02075532
EMBL:GQ259590 IPI:IPI00955537 UniGene:Bt.89461
Ensembl:ENSBTAT00000065838 OMA:MSHEAVK Uniprot:D3IVZ2
Length = 661
Score = 147 (56.8 bits), Expect = 3.0e-08, P = 3.0e-08
Identities = 32/86 (37%), Positives = 51/86 (59%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + V+G N P + +F ++ G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEVTGNNCPPHIESFSDVA--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>WB|WBGene00019245 [details] [associations]
symbol:sacy-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040010 "positive regulation of
growth rate" evidence=IMP] [GO:0002009 "morphogenesis of an
epithelium" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0005737
GO:GO:0040007 GO:GO:0040010 GO:GO:0002119 GO:GO:0008270
GO:GO:0003676 GO:GO:0040035 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HSSP:P10081 KO:K13116
OMA:KDQEERS HOGENOM:HOG000268792 EMBL:FO081567 RefSeq:NP_491962.1
ProteinModelPortal:Q9N5K1 SMR:Q9N5K1 PaxDb:Q9N5K1
EnsemblMetazoa:H27M09.1 GeneID:172413 KEGG:cel:CELE_H27M09.1
UCSC:H27M09.1 CTD:172413 WormBase:H27M09.1 InParanoid:Q9N5K1
NextBio:875413 Uniprot:Q9N5K1
Length = 630
Score = 140 (54.3 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 34/94 (36%), Positives = 54/94 (57%)
Query: 104 LNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
+ +Q + D + RK+ I G ++P P+ +F+++ +F +S L + G PT I
Sbjct: 160 IRRQSQEDYEIQRKRLGISCEGDHIPPPIGSFLEM--KFP-KSLLEFMQKQKGIVTPTAI 216
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q Q IPV LS R+ A TGSGKT+ F+ P++M
Sbjct: 217 QIQGIPVALSGRDMIGIASTGSGKTMTFVLPLVM 250
Score = 44 (20.5 bits), Expect = 3.1e-08, Sum P(2) = 3.1e-08
Identities = 21/94 (22%), Positives = 40/94 (42%)
Query: 16 KKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNV 75
++K+ D R + +E + D + G+ M +RKR+ + +
Sbjct: 9 RRKY-EDRRRKIQEEEMKERRDGMNLSSGDDDQDVDDMFLTALQRKREKVHRRAL----- 62
Query: 76 FKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE 109
KQ++ +KE++E + KKE +KQ E
Sbjct: 63 ---LKQVLAPTMNQKEEIER--KRKKKEEDKQSE 91
>ZFIN|ZDB-GENE-071022-2 [details] [associations]
symbol:ddx10 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
10" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-071022-2 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
GeneTree:ENSGT00550000074980 EMBL:CR450711 IPI:IPI00898518
Ensembl:ENSDART00000125785 ArrayExpress:F1QMM9 Bgee:F1QMM9
Uniprot:F1QMM9
Length = 875
Score = 148 (57.2 bits), Expect = 3.1e-08, P = 3.1e-08
Identities = 51/139 (36%), Positives = 69/139 (49%)
Query: 58 KKRKRKS-IAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
KK K K+ I + V+ F +K K+ K K KV+ K+ + ++ER+ + K
Sbjct: 4 KKVKEKTNITDDPVKNFEKWK--KKYA----KTKTKVKRSQKSKVKKRDWEVERENI--K 55
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
K S N P + VK S F L+ L E Y++PT IQRQ I L R+
Sbjct: 56 KLVDKYSEIN---P-KEAVKFSD-FPLSKKTLKGLLEAQYRQPTEIQRQTIGFALQGRDV 110
Query: 177 FACAPTGSGKTLAFLCPML 195
A TGSGKTLAFL P+L
Sbjct: 111 LGAAKTGSGKTLAFLIPVL 129
>CGD|CAL0000067 [details] [associations]
symbol:DBP5 species:5476 "Candida albicans" [GO:0003724 "RNA
helicase activity" evidence=IEA] [GO:0000822 "inositol
hexakisphosphate binding" evidence=IEA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0005934 "cellular bud tip" evidence=IEA] [GO:0044614 "nuclear
pore cytoplasmic filaments" evidence=IEA] [GO:0005844 "polysome"
evidence=IEA] [GO:0006406 "mRNA export from nucleus" evidence=IEA]
[GO:0006415 "translational termination" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 CGD:CAL0000067 GO:GO:0005524 GO:GO:0005737
GO:GO:0015031 GO:GO:0031965 GO:GO:0005643 GO:GO:0003723
EMBL:AACQ01000014 EMBL:AACQ01000013 GO:GO:0051028
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_721619.1 RefSeq:XP_721738.1 ProteinModelPortal:Q5AJD0
PRIDE:Q5AJD0 GeneID:3636564 GeneID:3636693 KEGG:cal:CaO19.1661
KEGG:cal:CaO19.9230 Uniprot:Q5AJD0
Length = 540
Score = 146 (56.5 bits), Expect = 3.3e-08, P = 3.3e-08
Identities = 54/208 (25%), Positives = 98/208 (47%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
+E A+ L A +S DK + + + +L S EG+ PE+ V++
Sbjct: 9 VEADATDLLASLSIDKSGEKLEEIKKGSTPDPSDLLGGLSLKEGDSKKPEEKK-EVVEEP 67
Query: 61 KRKSIAGETVEGFNVFKSSKQLVP---AVDKEKEKVEDGPSKAKKELNKQIERDA-VFRK 116
+ K I + + +S ++ A ++ KE+V++ + KE + E + +
Sbjct: 68 ENKEINDDKKDEDKKDESKDEVKDGDGAKEETKEEVKEESKEEPKEPKEPKEPATNLIKS 127
Query: 117 KYNIHVSGANV---P-SPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
Y + V A++ P SPL + VK G LL+ L + + +P+ IQ +A+P+LLS
Sbjct: 128 SYEVKVKLADIQADPNSPLYS-VKSFEELGLSPELLKGLYAMKFNKPSKIQEKALPLLLS 186
Query: 173 D--RECFACAPTGSGKTLAFLCPMLMKL 198
+ R + +G+GKT AF ML ++
Sbjct: 187 NPPRNMIGQSQSGTGKTAAFSLTMLSRV 214
>SGD|S000005056 [details] [associations]
symbol:DBP2 "ATP-dependent RNA helicase of the DEAD-box
protein family" species:4932 "Saccharomyces cerevisiae" [GO:0071042
"nuclear polyadenylation-dependent mRNA catabolic process"
evidence=IGI;IMP] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0008186 "RNA-dependent
ATPase activity" evidence=IMP;IDA] [GO:0005737 "cytoplasm"
evidence=IEA;IDA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000184 "nuclear-transcribed mRNA catabolic process,
nonsense-mediated decay" evidence=IEA;IPI] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006364
"rRNA processing" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003724 "RNA helicase activity" evidence=ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005056 GO:GO:0005739 GO:GO:0005524
GO:GO:0005634 GO:GO:0000184 EMBL:BK006947 GO:GO:0003723 EMBL:Z69382
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0006364
GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014
PROSITE:PS51195 HOGENOM:HOG000268804 KO:K12823 OMA:IDAMSGY
OrthoDB:EOG47SWP6 EMBL:X52649 EMBL:Z71388 EMBL:M64991 PIR:S13757
RefSeq:NP_014287.3 RefSeq:NP_014296.4 ProteinModelPortal:P24783
SMR:P24783 DIP:DIP-2438N IntAct:P24783 MINT:MINT-636962
STRING:P24783 PaxDb:P24783 PeptideAtlas:P24783 EnsemblFungi:YNL112W
GeneID:855611 GeneID:855620 KEGG:sce:YNL103W KEGG:sce:YNL112W
CYGD:YNL112w GeneTree:ENSGT00660000095174 NextBio:979789
Genevestigator:P24783 GermOnline:YNL112W Uniprot:P24783
Length = 546
Score = 146 (56.5 bits), Expect = 3.4e-08, P = 3.4e-08
Identities = 35/97 (36%), Positives = 52/97 (53%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FRK+ + +SG ++P P+ TF G Y+L + G+ +PT IQ Q P+ L
Sbjct: 93 AQFRKENEMTISGHDIPKPITTF----DEAGFPDYVLNEVKAEGFDKPTGIQCQGWPMAL 148
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A TGSGKTL++ P ++ + L P D
Sbjct: 149 SGRDMVGIAATGSGKTLSYCLPGIVHINAQPLLAPGD 185
>UNIPROTKB|E2R4Z9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 EMBL:AAEX03005031
Ensembl:ENSCAFT00000017691 Uniprot:E2R4Z9
Length = 569
Score = 146 (56.5 bits), Expect = 3.6e-08, P = 3.6e-08
Identities = 38/94 (40%), Positives = 50/94 (53%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN Q ++ +++ I V G +V P+ F G L NL GY+ PTPIQ
Sbjct: 176 LNLQEDQIENLKRQLGIVVQGQDVTRPIIDF----EHCGFPEALNHNLKTSGYEVPTPIQ 231
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
Q IPV L R+ A A TGSGKT AFL P++ +
Sbjct: 232 MQMIPVGLLGRDVLASADTGSGKTAAFLLPVITR 265
>UNIPROTKB|F1NYX0 [details] [associations]
symbol:DDX49 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00670000098028 OMA:CQLLSMT EMBL:AADN02071779
EMBL:AADN02071780 IPI:IPI00822654 Ensembl:ENSGALT00000035055
ArrayExpress:F1NYX0 Uniprot:F1NYX0
Length = 482
Score = 145 (56.1 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 28/68 (41%), Positives = 38/68 (55%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
G +L+ ++G PTP+Q IP +L R+C CA TGSGKT AF+ P+L L
Sbjct: 11 GLAPWLVEQARQMGLSRPTPVQASCIPPILQGRDCLGCAKTGSGKTAAFVLPVLQVLSE- 69
Query: 202 FIPFDYFC 209
P+ FC
Sbjct: 70 -DPYGIFC 76
>UNIPROTKB|I3LV06 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005622 "intracellular" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0005622 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00610000086076
CTD:83479 OMA:VTRPIID EMBL:FP312674 RefSeq:XP_003357711.1
Ensembl:ENSSSCT00000031167 GeneID:100621580 KEGG:ssc:100621580
Uniprot:I3LV06
Length = 607
Score = 146 (56.5 bits), Expect = 4.0e-08, P = 4.0e-08
Identities = 41/94 (43%), Positives = 48/94 (51%)
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
QIE R + I V G VP P+ F G L NL GY+ PTPIQ Q
Sbjct: 169 QIEN---LRGQLGIVVEGRGVPRPIIDF----GHCGFPETLNFNLKTAGYEVPTPIQMQM 221
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
IPV L R+ A A TGSGKT AFL P++ + V
Sbjct: 222 IPVGLLGRDLLASADTGSGKTAAFLLPVITRALV 255
>UNIPROTKB|E2R4Y9 [details] [associations]
symbol:DDX59 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR007529 Pfam:PF04438
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00610000086076 OMA:VTRPIID EMBL:AAEX03005031
Ensembl:ENSCAFT00000017696 Uniprot:E2R4Y9
Length = 623
Score = 146 (56.5 bits), Expect = 4.1e-08, P = 4.1e-08
Identities = 38/94 (40%), Positives = 50/94 (53%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN Q ++ +++ I V G +V P+ F G L NL GY+ PTPIQ
Sbjct: 176 LNLQEDQIENLKRQLGIVVQGQDVTRPIIDF----EHCGFPEALNHNLKTSGYEVPTPIQ 231
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
Q IPV L R+ A A TGSGKT AFL P++ +
Sbjct: 232 MQMIPVGLLGRDVLASADTGSGKTAAFLLPVITR 265
>ASPGD|ASPL0000055571 [details] [associations]
symbol:AN1266 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0044732 "mitotic spindle pole body" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0008380
EMBL:BN001308 GO:GO:0006397 GO:GO:0003676 EMBL:AACD01000017
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K12811
OMA:SVVAPEI HOGENOM:HOG000007229 OrthoDB:EOG40CMR1
RefSeq:XP_658870.1 ProteinModelPortal:Q5BDW4
EnsemblFungi:CADANIAT00001356 GeneID:2877043 KEGG:ani:AN1266.2
Uniprot:Q5BDW4
Length = 1173
Score = 148 (57.2 bits), Expect = 4.5e-08, P = 4.5e-08
Identities = 45/127 (35%), Positives = 67/127 (52%)
Query: 80 KQLVPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYN-IHVSGANVPSPLR 132
K+ +P VD K VE P + K +L + E +A R + + I V G +VP P++
Sbjct: 484 KKDIPTVDHNK--VEYEPFRRKFYTEPSDLAQMSEEEAANLRLELDGIKVRGLDVPKPVQ 541
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+ S+ G L + +LG+ T IQ QAIP ++S R+ A TGSGKT+AFL
Sbjct: 542 KW----SQCGLGIQTLDVIDKLGFASLTSIQAQAIPAIMSGRDVIGVAKTGSGKTMAFLI 597
Query: 193 PMLMKLR 199
PM ++
Sbjct: 598 PMFRHIK 604
>UNIPROTKB|A1A4H6 [details] [associations]
symbol:DDX27 "Probable ATP-dependent RNA helicase DDX27"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
EMBL:BC126497 IPI:IPI00734460 RefSeq:NP_001073740.1 UniGene:Bt.2644
ProteinModelPortal:A1A4H6 PRIDE:A1A4H6 Ensembl:ENSBTAT00000057089
GeneID:514567 KEGG:bta:514567 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH NextBio:20871404
Uniprot:A1A4H6
Length = 765
Score = 136 (52.9 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 198 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 249
Score = 50 (22.7 bits), Expect = 5.0e-08, Sum P(2) = 5.0e-08
Identities = 16/60 (26%), Positives = 29/60 (48%)
Query: 22 DFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
D R K+ + SE+ + + ++ KA +K+RK+K G+ GF F+ + Q
Sbjct: 126 DLER-KDVEASEDEESETDYSSADENILTKADTLKIKERKKKKKKGQEAGGF--FEDASQ 182
Score = 42 (19.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 13/39 (33%), Positives = 19/39 (48%)
Query: 81 QLVPAVDKEKEKVEDGPSK-AKKELNKQIERDAVFRKKY 118
Q+ P D E E+ E+GP +K+ Q R A F +
Sbjct: 18 QVEPETDSEDEE-EEGPIVLGRKQKALQKNRSADFNPDF 55
>ZFIN|ZDB-GENE-031001-8 [details] [associations]
symbol:ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
27" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-031001-8 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 CTD:55661 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 EMBL:AY648729 IPI:IPI00501087
RefSeq:NP_001002869.1 UniGene:Dr.76523 ProteinModelPortal:Q6DRN0
PRIDE:Q6DRN0 GeneID:378844 KEGG:dre:378844 InParanoid:Q6DRN0
NextBio:20813841 ArrayExpress:Q6DRN0 Bgee:Q6DRN0 Uniprot:Q6DRN0
Length = 776
Score = 139 (54.0 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 25/52 (48%), Positives = 39/52 (75%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ ++ +G+K+PTPIQ+ +PV L ++ ACA TG+GKT AF+ P+L +L
Sbjct: 212 LLKAISTMGFKQPTPIQKACVPVGLLGKDICACAATGTGKTAAFMLPVLERL 263
Score = 45 (20.9 bits), Expect = 5.9e-08, Sum P(2) = 5.9e-08
Identities = 15/45 (33%), Positives = 21/45 (46%)
Query: 37 DDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
D+FS + E + KK KRK +T EGF F+ + Q
Sbjct: 156 DEFSSADEEVLKKADTLREKQKKGKRKM--ADTTEGF--FEDASQ 196
Score = 37 (18.1 bits), Expect = 3.9e-07, Sum P(2) = 3.9e-07
Identities = 8/26 (30%), Positives = 16/26 (61%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERDA 112
D+E+E+ E+ + ++E N + DA
Sbjct: 116 DQEEEEEEEEDDEEEEEDNDADDNDA 141
>UNIPROTKB|B4DXX7 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9606 "Homo
sapiens" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195 HOVERGEN:HBG015893
UniGene:Hs.99120 HGNC:HGNC:2699 EMBL:AC004474 EMBL:AK302172
IPI:IPI00646152 SMR:B4DXX7 STRING:B4DXX7 Ensembl:ENST00000537441
UCSC:uc011nar.1 Uniprot:B4DXX7
Length = 657
Score = 145 (56.1 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G+N P + F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 156 EKYDDIPVEATGSNCPPHIENFSDID--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKG 211
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 212 KRDLMACAQTGSGKTAAFLLPILSQI 237
>MGI|MGI:1349406 [details] [associations]
symbol:Ddx3y "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
Y-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:1349406 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 OrthoDB:EOG47D9FV
CTD:8653 EMBL:AJ007376 EMBL:BC021453 EMBL:L25337 IPI:IPI00134371
RefSeq:NP_036138.1 UniGene:Mm.486436 ProteinModelPortal:Q62095
SMR:Q62095 STRING:Q62095 PhosphoSite:Q62095 PaxDb:Q62095
PRIDE:Q62095 Ensembl:ENSMUST00000091190 GeneID:26900 KEGG:mmu:26900
InParanoid:Q62095 NextBio:304749 Bgee:Q62095 Genevestigator:Q62095
GermOnline:ENSMUSG00000069045 Uniprot:Q62095
Length = 658
Score = 145 (56.1 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 41/140 (29%), Positives = 66/140 (47%)
Query: 65 IAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI---ERDAVFRKKYN-- 119
I G GF F+ S + D+ E P + L +++ + +KY+
Sbjct: 107 IGGRDRTGFGKFERSGHSRWS-DRSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDI 165
Query: 120 -IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+ +G N P + F + G ++ N+ Y PTP+Q+ AIP++ R+ A
Sbjct: 166 PVEATGNNCPPHIENFSDIE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMA 221
Query: 179 CAPTGSGKTLAFLCPMLMKL 198
CA TGSGKT AFL P+L ++
Sbjct: 222 CAQTGSGKTAAFLLPILSQI 241
>UNIPROTKB|O15523 [details] [associations]
symbol:DDX3Y "ATP-dependent RNA helicase DDX3Y"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IDA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 Orphanet:1646
HOGENOM:HOG000268804 KO:K11594 HOVERGEN:HBG015893 HPA:HPA001648
HPA:HPA005631 OrthoDB:EOG47D9FV EMBL:AF000985 EMBL:AF000984
EMBL:BC034942 IPI:IPI00293616 RefSeq:NP_001116137.1
RefSeq:NP_004651.2 UniGene:Hs.99120 ProteinModelPortal:O15523
SMR:O15523 IntAct:O15523 MINT:MINT-2999090 STRING:O15523
PhosphoSite:O15523 PaxDb:O15523 PRIDE:O15523
Ensembl:ENST00000336079 Ensembl:ENST00000360160 GeneID:8653
KEGG:hsa:8653 UCSC:uc004fsu.1 CTD:8653 GeneCards:GC0YP015016
HGNC:HGNC:2699 MIM:400010 neXtProt:NX_O15523 PharmGKB:PA27168
InParanoid:O15523 OMA:GNWANAN PhylomeDB:O15523 GenomeRNAi:8653
NextBio:32449 ArrayExpress:O15523 Bgee:O15523 CleanEx:HS_DDX3Y
Genevestigator:O15523 GermOnline:ENSG00000067048 Uniprot:O15523
Length = 660
Score = 145 (56.1 bits), Expect = 6.2e-08, P = 6.2e-08
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G+N P + F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 159 EKYDDIPVEATGSNCPPHIENFSDID--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKG 214
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 215 KRDLMACAQTGSGKTAAFLLPILSQI 240
>CGD|CAL0000864 [details] [associations]
symbol:DRS1 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0030687 "preribosome, large subunit precursor"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864 GO:GO:0005524
GO:GO:0005730 GO:GO:0042254 GO:GO:0003723 GO:GO:0035690
EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K13181 RefSeq:XP_719395.1 ProteinModelPortal:Q5ACK7
STRING:Q5ACK7 GeneID:3639045 KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 144 (55.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 53/181 (29%), Positives = 92/181 (50%)
Query: 22 DFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR---KRKSIAGE-TVEGFNVFK 77
DF +F+ + E+ N ++F F E + + + + +KK+ K +S E ++GF +
Sbjct: 28 DF-KFQIDGETTNTLEEFDFQENKVKEVD--LDEIIKKKGGLKEESDDEELALDGFGM-G 83
Query: 78 SSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKL 137
+SKQ ++E+E+VE K E E A F ++ SP +T
Sbjct: 84 ASKQ-EEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEE----------SSPQQTHTSF 132
Query: 138 SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
+ +L+ +AEL + +PTPIQ +IP+ L ++ A A TGSGKT A++ P++ +
Sbjct: 133 QT-LQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIER 191
Query: 198 L 198
L
Sbjct: 192 L 192
>UNIPROTKB|Q5ACK7 [details] [associations]
symbol:DRS1 "ATP-dependent RNA helicase DRS1"
species:237561 "Candida albicans SC5314" [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 CGD:CAL0000864
GO:GO:0005524 GO:GO:0005730 GO:GO:0042254 GO:GO:0003723
GO:GO:0035690 EMBL:AACQ01000032 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K13181 RefSeq:XP_719395.1
ProteinModelPortal:Q5ACK7 STRING:Q5ACK7 GeneID:3639045
KEGG:cal:CaO19.7635 Uniprot:Q5ACK7
Length = 613
Score = 144 (55.7 bits), Expect = 7.6e-08, P = 7.6e-08
Identities = 53/181 (29%), Positives = 92/181 (50%)
Query: 22 DFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR---KRKSIAGE-TVEGFNVFK 77
DF +F+ + E+ N ++F F E + + + + +KK+ K +S E ++GF +
Sbjct: 28 DF-KFQIDGETTNTLEEFDFQENKVKEVD--LDEIIKKKGGLKEESDDEELALDGFGM-G 83
Query: 78 SSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKL 137
+SKQ ++E+E+VE K E E A F ++ SP +T
Sbjct: 84 ASKQ-EEEEEEEEEEVEVPEVKEVVEPEDSAEAIADFYEE----------SSPQQTHTSF 132
Query: 138 SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
+ +L+ +AEL + +PTPIQ +IP+ L ++ A A TGSGKT A++ P++ +
Sbjct: 133 QT-LQLSRPVLKGIAELKFTKPTPIQSASIPIALLGKDIVAGAQTGSGKTGAYMIPIIER 191
Query: 198 L 198
L
Sbjct: 192 L 192
>UNIPROTKB|Q9KLH6 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD box
family" species:243277 "Vibrio cholerae O1 biovar El Tor str.
N16961" [GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0008152 "metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 142 (55.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
S+ G +S LL L+ELG PTPIQ+QAIP +L ++ A A TG+GKT AF P++ +
Sbjct: 9 SQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
>TIGR_CMR|VC_A0768 [details] [associations]
symbol:VC_A0768 "ATP-dependent RNA helicase, DEAD/DEAH box
family" species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0008152
"metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE003853 GenomeReviews:AE003853_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 KO:K11927
OMA:LECVINY PIR:H82418 RefSeq:NP_233154.1 ProteinModelPortal:Q9KLH6
DNASU:2612338 GeneID:2612338 KEGG:vch:VCA0768 PATRIC:20086092
ProtClustDB:CLSK869757 Uniprot:Q9KLH6
Length = 422
Score = 142 (55.0 bits), Expect = 8.2e-08, P = 8.2e-08
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
S+ G +S LL L+ELG PTPIQ+QAIP +L ++ A A TG+GKT AF P++ +
Sbjct: 9 SQLGLDSRLLNTLSELGIANPTPIQQQAIPHVLQGKDVLAGAQTGTGKTAAFGLPLIQR 67
>UNIPROTKB|F1NEQ3 [details] [associations]
symbol:DDX18 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
OMA:KDGYRSY GeneTree:ENSGT00680000100037 EMBL:AADN02016926
IPI:IPI00598837 Ensembl:ENSGALT00000019841 Uniprot:F1NEQ3
Length = 659
Score = 144 (55.7 bits), Expect = 8.5e-08, P = 8.5e-08
Identities = 53/157 (33%), Positives = 77/157 (49%)
Query: 49 PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI 108
PE KK+KRK+ AG EG K +K V E E EDG +KE
Sbjct: 93 PEAVGAKRRKKKKRKAAAGP--EGGTETKKAKA-EEDVSVEAED-EDGQDTGEKEAE--- 145
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E D V + ++GA + + L S E+ L+ ++++G+ T IQ ++I
Sbjct: 146 EEDEV--PSLPLGLTGAFEDNSFTSLAGLVS----EN-TLKGISDMGFTHMTEIQHKSIK 198
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL-RVLFIP 204
LL R+ A A TGSGKTLAFL P + + ++ F+P
Sbjct: 199 PLLEGRDILAAAKTGSGKTLAFLIPAVELIYKLKFMP 235
>UNIPROTKB|Q8EBV7 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 141 (54.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S + L+ LAELGY++PTPIQ +AIP +L+ ++ A A TG+GKT AF P+L L
Sbjct: 4 SALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLL 63
>TIGR_CMR|SO_3388 [details] [associations]
symbol:SO_3388 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
RefSeq:NP_718942.1 ProteinModelPortal:Q8EBV7 GeneID:1171066
KEGG:son:SO_3388 PATRIC:23526456 OMA:SHLVRSK ProtClustDB:CLSK907144
Uniprot:Q8EBV7
Length = 409
Score = 141 (54.7 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 29/60 (48%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S + L+ LAELGY++PTPIQ +AIP +L+ ++ A A TG+GKT AF P+L L
Sbjct: 4 SALSLNTQLVDTLAELGYQQPTPIQVEAIPAILTKQDVMAGAQTGTGKTAAFALPILQLL 63
>UNIPROTKB|F8WEI3 [details] [associations]
symbol:DDX56 "Probable ATP-dependent RNA helicase DDX56"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR011545
Pfam:PF00270 GO:GO:0005524 GO:GO:0003676 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 EMBL:AC004938 HGNC:HGNC:18193
IPI:IPI00925260 ProteinModelPortal:F8WEI3 SMR:F8WEI3
Ensembl:ENST00000415758 ArrayExpress:F8WEI3 Bgee:F8WEI3
Uniprot:F8WEI3
Length = 103
Score = 122 (48.0 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 26/57 (45%), Positives = 36/57 (63%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + LL+ + +LG+ PT IQ +AIP+ L ++ A A TGSGKT A+ PML L
Sbjct: 13 GLDPRLLQAVTDLGWSRPTLIQEKAIPLALEGKDLLARARTGSGKTAAYAIPMLQLL 69
>ZFIN|ZDB-GENE-030131-9685 [details] [associations]
symbol:ddx18 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 18" species:7955 "Danio rerio" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0030099 "myeloid
cell differentiation" evidence=IMP] [GO:0030097 "hemopoiesis"
evidence=IMP] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-030131-9685
GO:GO:0005524 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0030099 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959 KO:K13179 CTD:8886
HOVERGEN:HBG105702 EMBL:AY648748 IPI:IPI00492099
RefSeq:NP_001003411.1 UniGene:Dr.24235 ProteinModelPortal:Q6DRL1
STRING:Q6DRL1 PRIDE:Q6DRL1 GeneID:321127 KEGG:dre:321127
InParanoid:Q6DRL1 NextBio:20807243 ArrayExpress:Q6DRL1 Bgee:Q6DRL1
Uniprot:Q6DRL1
Length = 653
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 61/202 (30%), Positives = 98/202 (48%)
Query: 15 DKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIA-GETVEGF 73
D+ + +D A ++ ++++D+ V P+K KK+KRK A GE+
Sbjct: 43 DESEVASDSAPNVIEEQQQSVSDE---VNETSQKPKK------KKKKRKLDATGESTTS- 92
Query: 74 NVFKSSKQLVPAVDK---EKEKVEDGPSKAKK-ELNKQIERDAVFRKKYNIHVSGANVPS 129
+V K+ KQ V E+E+ E+G + K N E++ + + G +PS
Sbjct: 93 SVKKAKKQSVDTTQASAGEEEQQEEGNLETVKCPENGNNEKEGSAEEDSD--EDGPQLPS 150
Query: 130 PL------RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
L R+F LS E+ L+ + E+G+ T IQ + I LL R+ A A TG
Sbjct: 151 GLTGAFEDRSFASLSEVVS-EN-TLKGVKEMGFDTMTEIQHKTIRPLLEGRDVLAAAKTG 208
Query: 184 SGKTLAFLCPMLMKL-RVLFIP 204
SGKTLAFL P + + ++ F+P
Sbjct: 209 SGKTLAFLIPSIELIYKLKFMP 230
>RGD|1309586 [details] [associations]
symbol:RGD1309586 "similar to probable ATP-dependent RNA
helicase - mouse" species:10116 "Rattus norvegicus" [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1309586 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 OMA:HIVQECD
OrthoDB:EOG4S7JPR EMBL:CH473985 IPI:IPI00954695
RefSeq:NP_001102328.1 UniGene:Rn.218622 Ensembl:ENSRNOT00000003378
GeneID:364073 KEGG:rno:364073 UCSC:RGD:1309586 CTD:364073
NextBio:684798 Uniprot:D3ZN21
Length = 659
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 53/188 (28%), Positives = 84/188 (44%)
Query: 13 SFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEG 72
S DK + + +R +S +D S G D ++ V R +S G+ G
Sbjct: 61 SKDKDAYSSFGSRSDTRAKSSFFSDRGSGSRGRFDDRGRSDYEGVGSRGGRSGFGKFERG 120
Query: 73 FNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSP 130
N S+ A + + K + ++EL F K +I V +G N P
Sbjct: 121 GN----SRWCDKADEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGNNCPPH 176
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
+ +F + G ++ N+ Y PTP+Q+ AIP++ R+ ACA TGSGKT AF
Sbjct: 177 IESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSGKTAAF 232
Query: 191 LCPMLMKL 198
L P+L ++
Sbjct: 233 LLPILSQI 240
>UNIPROTKB|I3LDV0 [details] [associations]
symbol:DDX3Y "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005737
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:TILWVYE EMBL:FP565155
Ensembl:ENSSSCT00000028884 Uniprot:I3LDV0
Length = 667
Score = 143 (55.4 bits), Expect = 1.2e-07, P = 1.2e-07
Identities = 40/133 (30%), Positives = 64/133 (48%)
Query: 72 GFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI---ERDAVFRKKYN---IHVSGA 125
GF F+ S DK E P + L +++ + +KY+ + +G
Sbjct: 116 GFGKFERSGHS-RWCDKSDEDDWSKPLPPSERLEQELFSGGNTGINFEKYDDIPVEATGN 174
Query: 126 NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
N P + +F + G ++ N+ Y PTP+Q+ AIP++ R+ ACA TGSG
Sbjct: 175 NCPRHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKEKRDLMACAQTGSG 230
Query: 186 KTLAFLCPMLMKL 198
KT AFL P+L ++
Sbjct: 231 KTAAFLLPILSQI 243
>ZFIN|ZDB-GENE-030131-1565 [details] [associations]
symbol:ddx3 "DEAD (Asp-Glu-Ala-Asp) box
polypeptide 3" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-1565 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
KO:K11594 HOVERGEN:HBG015893 EMBL:BX545856 IPI:IPI00639693
RefSeq:NP_001119895.1 UniGene:Dr.104653 SMR:B0S6P6
Ensembl:ENSDART00000006867 GeneID:566947 KEGG:dre:566947 CTD:566947
OMA:IIMGNIN NextBio:20888452 Uniprot:B0S6P6
Length = 709
Score = 143 (55.4 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 31/86 (36%), Positives = 50/86 (58%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++ +
Sbjct: 204 EKYDDIPVEATGTNSPGHIESFHDVD--MG--EIIMGNITLSRYTRPTPVQKYAIPIIKT 259
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 260 KRDLMACAQTGSGKTAAFLLPVLSQI 285
>FB|FBgn0029979 [details] [associations]
symbol:CG10777 species:7227 "Drosophila melanogaster"
[GO:0003724 "RNA helicase activity" evidence=ISS] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:AE014298
GO:GO:0006200 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0016779
GeneTree:ENSGT00660000095174 HSSP:P10081 EMBL:AY060404
RefSeq:NP_572424.1 UniGene:Dm.101 SMR:Q9W3M7 DIP:DIP-18838N
MINT:MINT-850836 EnsemblMetazoa:FBtr0071132 GeneID:31707
KEGG:dme:Dmel_CG10777 UCSC:CG10777-RB FlyBase:FBgn0029979
InParanoid:Q9W3M7 OMA:FLENRNT OrthoDB:EOG4B8GV9 GenomeRNAi:31707
NextBio:774939 Uniprot:Q9W3M7
Length = 945
Score = 144 (55.7 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 45/150 (30%), Positives = 77/150 (51%)
Query: 52 AMVSFVKKRKRKSIAGETVE--GFNVFKSS-KQLVPAVDKEKEKVEDGPSKAKKELNKQI 108
A + + K +R I E + G N+ K + L P + K+ + + AK E +Q+
Sbjct: 161 AALGMLSKEERAEIQREKAKNPGRNLVKPKWENLEPFL-KDFYNIHPN-TLAKSE--QQV 216
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
A R++ I VSG +P P+ +F + S ++++ + G+ +PT IQ Q P
Sbjct: 217 ---AEIRRELEITVSGNELPHPVVSFEESS----LPAHVIEEMKRQGFTKPTAIQSQGWP 269
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LS R+ A TGSGKTLA++ P ++ +
Sbjct: 270 IALSGRDLVGIAQTGSGKTLAYMLPAIVHI 299
>ASPGD|ASPL0000044206 [details] [associations]
symbol:AN1949 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0030686 "90S
preribosome" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0005635 "nuclear envelope" evidence=IEA] [GO:0030687
"preribosome, large subunit precursor" evidence=IEA] [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0006364 "rRNA processing" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005730 EMBL:BN001307
GO:GO:0003723 EMBL:AACD01000029 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY RefSeq:XP_659553.1
ProteinModelPortal:Q5BBY1 STRING:Q5BBY1
EnsemblFungi:CADANIAT00008609 GeneID:2875602 KEGG:ani:AN1949.2
OrthoDB:EOG4ZKNVS Uniprot:Q5BBY1
Length = 609
Score = 142 (55.0 bits), Expect = 1.5e-07, P = 1.5e-07
Identities = 49/165 (29%), Positives = 79/165 (47%)
Query: 42 VEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK 101
VEG+ T+ + K K +A + V+ K P+ D+E+ + ED K +
Sbjct: 40 VEGKATETTTELT----KDKDVELAKKVVKEEAQKKRKVSHSPS-DEEESESEDEEKKEE 94
Query: 102 KELNKQIERDAVFRKKYNI-HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
E + ++ D+ ++ V ++P P K + G L+ + E+G++ T
Sbjct: 95 DEKDN-VKEDSGKANVPDLPSVDAVSLPQP-DGGPKKFTELGLSEKTLQGIKEMGFETMT 152
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL-FIP 204
IQ++ IP LL+ R+ A TGSGKTLAFL P + L L F P
Sbjct: 153 EIQQRTIPPLLAGRDVLGAAKTGSGKTLAFLIPAIEMLSALRFKP 197
>MGI|MGI:91842 [details] [associations]
symbol:D1Pas1 "DNA segment, Chr 1, Pasteur Institute 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0007275 "multicellular
organismal development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0030154 "cell differentiation" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:91842
GO:GO:0007275 GO:GO:0005524 GO:GO:0030154 GO:GO:0003677
GO:GO:0007283 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804
KO:K11594 HOVERGEN:HBG015893 EMBL:J04847 EMBL:AK029542
IPI:IPI00133708 PIR:A32378 RefSeq:NP_149068.1 UniGene:Mm.108054
ProteinModelPortal:P16381 SMR:P16381 IntAct:P16381 STRING:P16381
PhosphoSite:P16381 PaxDb:P16381 PRIDE:P16381
Ensembl:ENSMUST00000045108 GeneID:110957 KEGG:mmu:110957 CTD:110957
InParanoid:P16381 OMA:HIVQECD OrthoDB:EOG4S7JPR NextBio:365019
Bgee:P16381 CleanEx:MM_D1PAS1 Genevestigator:P16381
GermOnline:ENSMUSG00000039224 Uniprot:P16381
Length = 660
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 160 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 215
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 216 KRDLMACAQTGSGKTAAFLLPILSQI 241
>UNIPROTKB|G5E631 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654
OMA:KYERGGN EMBL:DAAA02073612 RefSeq:NP_001179891.1 UniGene:Bt.9783
PRIDE:G5E631 Ensembl:ENSBTAT00000050399 GeneID:510093
KEGG:bta:510093 NextBio:20869274 Uniprot:G5E631
Length = 661
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 160 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 215
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 216 KRDLMACAQTGSGKTAAFLLPILSQI 241
>UNIPROTKB|F1RX16 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2001243 "negative regulation of intrinsic apoptotic
signaling pathway" evidence=IEA] [GO:1900087 "positive regulation
of G1/S transition of mitotic cell cycle" evidence=IEA] [GO:0097193
"intrinsic apoptotic signaling pathway" evidence=IEA] [GO:0071470
"cellular response to osmotic stress" evidence=IEA] [GO:0071243
"cellular response to arsenic-containing substance" evidence=IEA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IEA] [GO:0045948
"positive regulation of translational initiation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0045087 "innate immune
response" evidence=IEA] [GO:0043280 "positive regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IEA] [GO:0043154 "negative regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0043024 "ribosomal small subunit
binding" evidence=IEA] [GO:0042256 "mature ribosome assembly"
evidence=IEA] [GO:0035613 "RNA stem-loop binding" evidence=IEA]
[GO:0034063 "stress granule assembly" evidence=IEA] [GO:0031333
"negative regulation of protein complex assembly" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=IEA]
[GO:0030307 "positive regulation of cell growth" evidence=IEA]
[GO:0022627 "cytosolic small ribosomal subunit" evidence=IEA]
[GO:0017148 "negative regulation of translation" evidence=IEA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IEA]
[GO:0010494 "cytoplasmic stress granule" evidence=IEA] [GO:0009615
"response to virus" evidence=IEA] [GO:0008625 "extrinsic apoptotic
signaling pathway via death domain receptors" evidence=IEA]
[GO:0008190 "eukaryotic initiation factor 4E binding" evidence=IEA]
[GO:0008143 "poly(A) RNA binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0007243
"intracellular protein kinase cascade" evidence=IEA] [GO:0007059
"chromosome segregation" evidence=IEA] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014
PROSITE:PS51195 GeneTree:ENSGT00620000087942 OMA:KYERGGN
EMBL:CU861899 Ensembl:ENSSSCT00000013398 Uniprot:F1RX16
Length = 661
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>FB|FBgn0052344 [details] [associations]
symbol:CG32344 species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IMP] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0006200 GO:GO:0003723 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14808
GeneTree:ENSGT00550000075100 HSSP:P10081 EMBL:AY075397
RefSeq:NP_612028.4 UniGene:Dm.796 SMR:Q8SY39 IntAct:Q8SY39
STRING:Q8SY39 EnsemblMetazoa:FBtr0072576 GeneID:326208
KEGG:dme:Dmel_CG32344 UCSC:CG32344-RA FlyBase:FBgn0052344
InParanoid:Q8SY39 OMA:NANDEMS OrthoDB:EOG40CFZ4 GenomeRNAi:326208
NextBio:847633 Uniprot:Q8SY39
Length = 827
Score = 143 (55.4 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 27/53 (50%), Positives = 37/53 (69%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
L++ + + GYK PTPIQR+ IP++L R+ A A TGSGKT FL P+ KL+
Sbjct: 50 LIKGITKRGYKVPTPIQRKTIPLILEGRDVVAMAKTGSGKTACFLIPLFEKLQ 102
>UNIPROTKB|J9P0V9 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 KO:K11594 CTD:1654 EMBL:AAEX03026295
RefSeq:XP_861268.1 Ensembl:ENSCAFT00000045177 GeneID:480886
KEGG:cfa:480886 Uniprot:J9P0V9
Length = 662
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>UNIPROTKB|O00571 [details] [associations]
symbol:DDX3X "ATP-dependent RNA helicase DDX3X"
species:9606 "Homo sapiens" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0016607 "nuclear
speck" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0030307 "positive
regulation of cell growth" evidence=IMP] [GO:0005852 "eukaryotic
translation initiation factor 3 complex" evidence=IDA] [GO:1900087
"positive regulation of G1/S transition of mitotic cell cycle"
evidence=IMP] [GO:0045948 "positive regulation of translational
initiation" evidence=IMP] [GO:0031333 "negative regulation of
protein complex assembly" evidence=IDA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=IDA] [GO:0017148 "negative
regulation of translation" evidence=IMP] [GO:0034063 "stress
granule assembly" evidence=IDA] [GO:0010494 "cytoplasmic stress
granule" evidence=IDA] [GO:0071470 "cellular response to osmotic
stress" evidence=IDA] [GO:0071243 "cellular response to
arsenic-containing substance" evidence=IDA] [GO:2001243 "negative
regulation of intrinsic apoptotic signaling pathway" evidence=IMP]
[GO:0007059 "chromosome segregation" evidence=IMP] [GO:0022627
"cytosolic small ribosomal subunit" evidence=IDA] [GO:0045727
"positive regulation of translation" evidence=IDA] [GO:0008143
"poly(A) RNA binding" evidence=IDA] [GO:0031369 "translation
initiation factor binding" evidence=IDA] [GO:0042256 "mature
ribosome assembly" evidence=IMP] [GO:0043024 "ribosomal small
subunit binding" evidence=IDA] [GO:0003723 "RNA binding"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=IDA] [GO:0004004 "ATP-dependent RNA
helicase activity" evidence=IDA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0009615 "response to virus" evidence=IDA] [GO:0007243
"intracellular protein kinase cascade" evidence=IDA] [GO:0032728
"positive regulation of interferon-beta production" evidence=TAS]
[GO:0045087 "innate immune response" evidence=IMP] [GO:0071651
"positive regulation of chemokine (C-C motif) ligand 5 production"
evidence=TAS] [GO:0035613 "RNA stem-loop binding" evidence=IDA]
[GO:0010501 "RNA secondary structure unwinding" evidence=IDA]
[GO:0048027 "mRNA 5'-UTR binding" evidence=IDA] [GO:0008134
"transcription factor binding" evidence=IDA] [GO:0030308 "negative
regulation of cell growth" evidence=IDA] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0043154 "negative regulation of
cysteine-type endopeptidase activity involved in apoptotic process"
evidence=IMP] [GO:0097193 "intrinsic apoptotic signaling pathway"
evidence=IMP] [GO:0043280 "positive regulation of cysteine-type
endopeptidase activity involved in apoptotic process" evidence=IMP]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006200 "ATP catabolic process" evidence=IDA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0019048
GO:GO:0043066 GO:GO:0043154 GO:GO:0030307 GO:GO:0007059
GO:GO:0030308 GO:GO:0005741 GO:GO:0017148 GO:GO:0003677
GO:GO:0031333 GO:GO:0016607 GO:GO:0045944 GO:GO:0045087
GO:GO:0007243 GO:GO:0006351 GO:GO:0009615 GO:GO:0043065
GO:GO:0048027 GO:GO:0043280 GO:GO:0071470 GO:GO:0004003
GO:GO:0097193 GO:GO:1900087 GO:GO:0008134 EMBL:CH471141
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
KO:K11594 HOVERGEN:HBG015893 EMBL:U50553 EMBL:AF061337
EMBL:AF000983 EMBL:AF000982 EMBL:AK291153 EMBL:AK304689
EMBL:AL391647 EMBL:Z93015 EMBL:BC011819 IPI:IPI00215637
IPI:IPI00985384 RefSeq:NP_001180346.1 RefSeq:NP_001347.3
UniGene:Hs.380774 PDB:2I4I PDB:2JGN PDB:3JRV PDBsum:2I4I
PDBsum:2JGN PDBsum:3JRV ProteinModelPortal:O00571 SMR:O00571
DIP:DIP-27551N IntAct:O00571 MINT:MINT-93217 STRING:O00571
PhosphoSite:O00571 REPRODUCTION-2DPAGE:IPI00215637
SWISS-2DPAGE:O00571 PaxDb:O00571 PeptideAtlas:O00571 PRIDE:O00571
Ensembl:ENST00000399959 Ensembl:ENST00000457138 GeneID:1654
KEGG:hsa:1654 UCSC:uc004dfe.3 CTD:1654 GeneCards:GC0XP041192
HGNC:HGNC:2745 HPA:HPA001648 HPA:HPA005631 MIM:300160
neXtProt:NX_O00571 PharmGKB:PA27216 InParanoid:O00571 OMA:KYERGGN
OrthoDB:EOG47D9FV PhylomeDB:O00571 BindingDB:O00571
ChEMBL:CHEMBL5553 ChiTaRS:DDX3X EvolutionaryTrace:O00571
GenomeRNAi:1654 NextBio:6810 ArrayExpress:O00571 Bgee:O00571
CleanEx:HS_DDX3X Genevestigator:O00571 GermOnline:ENSG00000124487
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 GO:GO:0071651
GO:GO:0032728 Uniprot:O00571
Length = 662
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>MGI|MGI:103064 [details] [associations]
symbol:Ddx3x "DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 3,
X-linked" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003723
"RNA binding" evidence=ISO] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISO] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0006200 "ATP
catabolic process" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006417 "regulation
of translation" evidence=IEA] [GO:0006915 "apoptotic process"
evidence=IEA] [GO:0007059 "chromosome segregation" evidence=ISO]
[GO:0007243 "intracellular protein kinase cascade" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0008143 "poly(A) RNA binding" evidence=ISO] [GO:0008152
"metabolic process" evidence=IEA] [GO:0008190 "eukaryotic
initiation factor 4E binding" evidence=ISO] [GO:0008625 "extrinsic
apoptotic signaling pathway via death domain receptors"
evidence=ISO] [GO:0009615 "response to virus" evidence=ISO]
[GO:0010494 "cytoplasmic stress granule" evidence=ISO] [GO:0010501
"RNA secondary structure unwinding" evidence=ISO] [GO:0016020
"membrane" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0017148 "negative regulation of translation" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0031333 "negative regulation of protein complex assembly"
evidence=ISO] [GO:0031369 "translation initiation factor binding"
evidence=ISO] [GO:0034063 "stress granule assembly" evidence=ISO]
[GO:0035613 "RNA stem-loop binding" evidence=ISO] [GO:0042254
"ribosome biogenesis" evidence=IEA] [GO:0042256 "mature ribosome
assembly" evidence=ISO] [GO:0043024 "ribosomal small subunit
binding" evidence=ISO] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISO] [GO:0043066 "negative regulation
of apoptotic process" evidence=ISO] [GO:0043154 "negative
regulation of cysteine-type endopeptidase activity involved in
apoptotic process" evidence=ISO] [GO:0043280 "positive regulation
of cysteine-type endopeptidase activity involved in apoptotic
process" evidence=ISO] [GO:0045087 "innate immune response"
evidence=ISO] [GO:0045727 "positive regulation of translation"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO] [GO:0045948
"positive regulation of translational initiation" evidence=ISO]
[GO:0048027 "mRNA 5'-UTR binding" evidence=ISO] [GO:0071243
"cellular response to arsenic-containing substance" evidence=ISO]
[GO:0071470 "cellular response to osmotic stress" evidence=ISO]
[GO:0097193 "intrinsic apoptotic signaling pathway" evidence=ISO]
[GO:1900087 "positive regulation of G1/S transition of mitotic cell
cycle" evidence=ISO] [GO:2001243 "negative regulation of intrinsic
apoptotic signaling pathway" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 MGI:MGI:103064
GO:GO:0005524 GO:GO:0005634 GO:GO:0043066 GO:GO:0043154
GO:GO:0030307 GO:GO:0007059 GO:GO:0005741 GO:GO:0017148
GO:GO:0003677 GO:GO:0031333 GO:GO:0016607 GO:GO:0045944
GO:GO:0045087 GO:GO:0007243 GO:GO:0006351 GO:GO:0009615
GO:GO:0043065 GO:GO:0048027 GO:GO:0043280 GO:GO:0071470
GO:GO:0004003 GO:GO:0097193 GO:GO:1900087 GO:GO:0008134
GO:GO:0071243 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010494 GO:GO:0034063 GO:GO:2001243 GO:GO:0008625
GO:GO:0045948 GO:GO:0004004 GO:GO:0042256 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0010501 GO:GO:0008143
GeneTree:ENSGT00620000087942 HOGENOM:HOG000268804 KO:K11594
HOVERGEN:HBG015893 CTD:1654 OrthoDB:EOG47D9FV ChiTaRS:DDX3X
GO:GO:0008190 GO:GO:0043024 GO:GO:0035613 EMBL:Z38117 EMBL:L25126
IPI:IPI00230035 PIR:I84741 RefSeq:NP_034158.1 UniGene:Mm.289662
ProteinModelPortal:Q62167 SMR:Q62167 IntAct:Q62167
MINT:MINT-1870173 STRING:Q62167 PhosphoSite:Q62167
REPRODUCTION-2DPAGE:Q62167 PaxDb:Q62167 PRIDE:Q62167
Ensembl:ENSMUST00000000804 GeneID:13205 KEGG:mmu:13205
InParanoid:Q62167 NextBio:283364 Bgee:Q62167 CleanEx:MM_ERH
Genevestigator:Q62167 GermOnline:ENSMUSG00000000787 Uniprot:Q62167
Length = 662
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>RGD|1564771 [details] [associations]
symbol:Ddx3x "DEAD (Asp-Glu-Ala-Asp) box polypeptide 3,
X-linked" species:10116 "Rattus norvegicus" [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 RGD:1564771 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
OMA:KYERGGN OrthoDB:EOG47D9FV IPI:IPI00362534 PhosphoSite:D4ADE8
PRIDE:D4ADE8 Ensembl:ENSRNOT00000039551 UCSC:RGD:1564771
Uniprot:D4ADE8
Length = 662
Score = 142 (55.0 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 161 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 216
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 217 KRDLMACAQTGSGKTAAFLLPILSQI 242
>UNIPROTKB|E2RRQ7 [details] [associations]
symbol:DDX3X "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00620000087942 OMA:KYERGGN EMBL:AAEX03026295
Ensembl:ENSCAFT00000022643 Uniprot:E2RRQ7
Length = 706
Score = 142 (55.0 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 31/86 (36%), Positives = 49/86 (56%)
Query: 116 KKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+KY+ + +G N P + +F + G ++ N+ Y PTP+Q+ AIP++
Sbjct: 203 EKYDDIPVEATGNNCPPHIESFSDVE--MG--EIIMGNIELTRYTRPTPVQKHAIPIIKE 258
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L ++
Sbjct: 259 KRDLMACAQTGSGKTAAFLLPILSQI 284
>UNIPROTKB|Q48AV0 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 139 (54.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S F +S LL+ + E Y EPT IQ+Q+IP++L+ + A A TG+GKT AF P+L +L
Sbjct: 8 SSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQL 67
>TIGR_CMR|CPS_0042 [details] [associations]
symbol:CPS_0042 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 RefSeq:YP_266818.1 ProteinModelPortal:Q48AV0
GeneID:3521124 KEGG:cps:CPS_0042 PATRIC:21463513 OMA:AITESAY
BioCyc:CPSY167879:GI48-153-MONOMER Uniprot:Q48AV0
Length = 420
Score = 139 (54.0 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 28/60 (46%), Positives = 40/60 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S F +S LL+ + E Y EPT IQ+Q+IP++L+ + A A TG+GKT AF P+L +L
Sbjct: 8 SSFSLDSTLLKAITESAYDEPTEIQKQSIPLILAKHDVMARAQTGTGKTAAFALPILQQL 67
>SGD|S000001107 [details] [associations]
symbol:RRP3 "Protein involved in rRNA processing"
species:4932 "Saccharomyces cerevisiae" [GO:0042254 "ribosome
biogenesis" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000462 "maturation of
SSU-rRNA from tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA,
LSU-rRNA)" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0008186 "RNA-dependent ATPase activity"
evidence=IDA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IC] [GO:0006364 "rRNA processing"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 SGD:S000001107 GO:GO:0005524
GO:GO:0005730 EMBL:BK006934 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 EMBL:U00061 HOGENOM:HOG000268802
GO:GO:0000462 GeneTree:ENSGT00670000098028 KO:K14777 OMA:IFIPSKF
OrthoDB:EOG4ZPJ3P EMBL:AY389302 EMBL:AY389303 PIR:S46713
RefSeq:NP_011932.2 ProteinModelPortal:P38712 SMR:P38712
DIP:DIP-6533N IntAct:P38712 MINT:MINT-518716 STRING:P38712
PaxDb:P38712 PeptideAtlas:P38712 EnsemblFungi:YHR065C GeneID:856462
KEGG:sce:YHR065C CYGD:YHR065c NextBio:982111 Genevestigator:P38712
GermOnline:YHR065C Uniprot:P38712
Length = 501
Score = 140 (54.3 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 44/148 (29%), Positives = 67/148 (45%)
Query: 54 VSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE---DGPSKAKKELNKQIER 110
+S + KRK K E + K A++ +K+ +E +G S++ E + E+
Sbjct: 1 MSKIVKRKEKKANDELTS-----LAEKIRAKALENQKKLIEAEKEGGSESDSEEDATAEK 55
Query: 111 DAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVL 170
V + K VS N + + S L++ L Y +PTPIQ +AIP
Sbjct: 56 KKVLKSKSKSTVSTQNENTNEDESFESFSELNLVPELIQACKNLNYSKPTPIQSKAIPPA 115
Query: 171 LSDRECFACAPTGSGKTLAFLCPMLMKL 198
L + A TGSGKT AF P+L +L
Sbjct: 116 LEGHDIIGLAQTGSGKTAAFAIPILNRL 143
>GENEDB_PFALCIPARUM|PF14_0437 [details] [associations]
symbol:PF14_0437 "helicase, truncated,
putative" species:5833 "Plasmodium falciparum" [GO:0005575
"cellular_component" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
EMBL:AE014187 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
RefSeq:XP_001348611.2 ProteinModelPortal:Q8IL13 IntAct:Q8IL13
MINT:MINT-1661155 PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA
GeneID:812019 KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 140 (54.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 82 LVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRF 141
LVP ++ ED + KE+ K+I RD + K I + G NVP P+ + K+
Sbjct: 69 LVPFEKNFYKEHEDISKLSTKEV-KEI-RD---KHKITI-LEGENVPKPVVSINKI---- 118
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G Y++++L PTPIQ Q P+ LS ++ A TGSGKTLAF+ P + +
Sbjct: 119 GFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHI 175
>UNIPROTKB|Q8IL13 [details] [associations]
symbol:PF14_0437 "Helicase, putative" species:36329
"Plasmodium falciparum 3D7" [GO:0005575 "cellular_component"
evidence=ND] [GO:0008150 "biological_process" evidence=ND]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003676 EMBL:AE014187
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 RefSeq:XP_001348611.2
ProteinModelPortal:Q8IL13 IntAct:Q8IL13 MINT:MINT-1661155
PRIDE:Q8IL13 EnsemblProtists:PF14_0437:mRNA GeneID:812019
KEGG:pfa:PF14_0437 EuPathDB:PlasmoDB:PF3D7_1445900
HOGENOM:HOG000199241 ProtClustDB:PTZ00110 Uniprot:Q8IL13
Length = 527
Score = 140 (54.3 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 42/117 (35%), Positives = 62/117 (52%)
Query: 82 LVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRF 141
LVP ++ ED + KE+ K+I RD + K I + G NVP P+ + K+
Sbjct: 69 LVPFEKNFYKEHEDISKLSTKEV-KEI-RD---KHKITI-LEGENVPKPVVSINKI---- 118
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G Y++++L PTPIQ Q P+ LS ++ A TGSGKTLAF+ P + +
Sbjct: 119 GFPDYVIKSLKNNNIVAPTPIQIQGWPIALSGKDMIGKAETGSGKTLAFILPAFVHI 175
>POMBASE|SPAC31A2.07c [details] [associations]
symbol:dbp10 "ATP-dependent RNA helicase Dbp10
(predicted)" species:4896 "Schizosaccharomyces pombe" [GO:0003723
"RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=ISO;IDA] [GO:0006364 "rRNA processing" evidence=IEA]
[GO:0042254 "ribosome biogenesis" evidence=ISO] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 PomBase:SPAC31A2.07c
GO:GO:0005524 EMBL:CU329670 GO:GO:0005730 GenomeReviews:CU329670_GR
GO:GO:0042254 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006364 GO:GO:0004004 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OrthoDB:EOG4JWZP1
EMBL:AB027882 PIR:S59645 RefSeq:NP_592919.1
ProteinModelPortal:Q09719 STRING:Q09719 EnsemblFungi:SPAC31A2.07c.1
GeneID:2543197 KEGG:spo:SPAC31A2.07c OMA:FYIPYRP NextBio:20804220
Uniprot:Q09719
Length = 848
Score = 142 (55.0 bits), Expect = 2.3e-07, P = 2.3e-07
Identities = 29/58 (50%), Positives = 38/58 (65%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G LLR + + G+K PTPIQR+ IP+LL R+ A TGSGKT AF+ PM+ L+
Sbjct: 75 GLNQTLLRAIFKKGFKAPTPIQRKTIPLLLEGRDVVGMARTGSGKTAAFVIPMIEHLK 132
>ZFIN|ZDB-GENE-021220-2 [details] [associations]
symbol:ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
54" species:7955 "Danio rerio" [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-021220-2 GO:GO:0005524 GO:GO:0005634 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:Q58083 KO:K14808
HOGENOM:HOG000246455 GeneTree:ENSGT00550000075100 CTD:79039
HOVERGEN:HBG051333 OrthoDB:EOG469QTB EMBL:CU929062 EMBL:FP236447
EMBL:AY099535 IPI:IPI00481864 RefSeq:NP_775375.1 UniGene:Dr.18320
STRING:Q8JGR2 Ensembl:ENSDART00000026416 Ensembl:ENSDART00000128587
GeneID:286777 KEGG:dre:286777 NextBio:20806437 Uniprot:Q8JGR2
Length = 862
Score = 142 (55.0 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 29/56 (51%), Positives = 39/56 (69%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT AFL P+ KL+
Sbjct: 86 SYPVYKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTAAFLVPLFEKLK 141
>DICTYBASE|DDB_G0280147 [details] [associations]
symbol:ddx47 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006364 "rRNA processing" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 dictyBase:DDB_G0280147 GO:GO:0005524
GO:GO:0005730 GenomeReviews:CM000152_GR GO:GO:0003723
EMBL:AAFI02000035 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0006364 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 HSSP:Q5STU4 KO:K14777 OMA:IFIPSKF
RefSeq:XP_641271.1 ProteinModelPortal:Q54VT4 SMR:Q54VT4
EnsemblProtists:DDB0234204 GeneID:8622403 KEGG:ddi:DDB_G0280147
Uniprot:Q54VT4
Length = 546
Score = 140 (54.3 bits), Expect = 2.4e-07, P = 2.4e-07
Identities = 51/162 (31%), Positives = 75/162 (46%)
Query: 49 PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI 108
P++ + +KK++ K + E E V + K+ + K +E ED + K+E K+I
Sbjct: 41 PKQIVKKVIKKQEEKEVKEEEEE--EVKEEIKKEIKKEIKNEELDEDSLLE-KEEEEKEI 97
Query: 109 ERDAVFRKKYNIHVSGANVPSPLR-TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E F N S TF L G ++ +LG+ +P IQR++I
Sbjct: 98 EE---FINNTNQKKSEEEEKKYENVTFESL----GVHPQIIDACNKLGFNKPKEIQRESI 150
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFC 209
P L R+ A TGSGKT AF+ P+L KL L P FC
Sbjct: 151 PWALKGRDIIGLAQTGSGKTAAFVIPVLQKL--LEAPQGLFC 190
>TAIR|locus:2116920 [details] [associations]
symbol:AT4G34910 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS] [GO:0006606
"protein import into nucleus" evidence=RCA] InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 EMBL:CP002687
GenomeReviews:CT486007_GR GO:GO:0003723 EMBL:AL161586
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 EMBL:AL079347
KO:K14810 HOGENOM:HOG000253015 OMA:TFLMSAT EMBL:BT002816
EMBL:BT004442 EMBL:AJ010467 IPI:IPI00520936 PIR:T10237 PIR:T51745
RefSeq:NP_195217.1 UniGene:At.24924 ProteinModelPortal:Q9SW44
SMR:Q9SW44 STRING:Q9SW44 PaxDb:Q9SW44 PRIDE:Q9SW44
EnsemblPlants:AT4G34910.1 GeneID:829643 KEGG:ath:AT4G34910
KEGG:dosa:Os03t0728800-01 GeneFarm:933 TAIR:At4g34910
InParanoid:Q9SW44 PhylomeDB:Q9SW44 ProtClustDB:CLSN2685920
Genevestigator:Q9SW44 GermOnline:AT4G34910 Uniprot:Q9SW44
Length = 626
Score = 140 (54.3 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 136 KLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
K G +S L+R L + G ++PT IQ+ AIP +L ++ A A TGSGKTLA+L P+L
Sbjct: 46 KSFEELGLDSRLIRALTKKGIEKPTLIQQSAIPYILEGKDVVARAKTGSGKTLAYLLPLL 105
Query: 196 MKL 198
KL
Sbjct: 106 QKL 108
Score = 35 (17.4 bits), Expect = 2.6e-07, Sum P(2) = 2.6e-07
Identities = 9/38 (23%), Positives = 19/38 (50%)
Query: 79 SKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
+ ++V V+K +E E + ++E K+ E F +
Sbjct: 13 NSEVVDEVEKAEEVEEQRNDREQEEEQKEEEAPKSFEE 50
>UNIPROTKB|F1NQV5 [details] [associations]
symbol:DDX27 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 EMBL:AADN02019007 IPI:IPI00579774
Ensembl:ENSGALT00000039062 ArrayExpress:F1NQV5 Uniprot:F1NQV5
Length = 758
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 27/52 (51%), Positives = 38/52 (73%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + LG+K+PTPIQ+ IPV L ++ ACA TG+GKT AF+ P+L +L
Sbjct: 191 LLKAITALGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFILPVLERL 242
>WB|WBGene00001598 [details] [associations]
symbol:glh-1 species:6239 "Caenorhabditis elegans"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0009791
"post-embryonic development" evidence=IMP] [GO:0007281 "germ cell
development" evidence=IMP] [GO:0016070 "RNA metabolic process"
evidence=ISS] [GO:0043186 "P granule" evidence=IDA] [GO:0003724
"RNA helicase activity" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0008432 "JUN kinase binding" evidence=IPI]
[GO:0043621 "protein self-association" evidence=IPI] [GO:0017151
"DEAD/H-box RNA helicase binding" evidence=IPI] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR001878 InterPro:IPR011545
Pfam:PF00098 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50158 PROSITE:PS51194 SMART:SM00343 SMART:SM00490
GO:GO:0005524 GO:GO:0006915 GO:GO:0046872 GO:GO:0008270
GO:GO:0003723 GO:GO:0009791 GO:GO:0007281 Gene3D:4.10.60.10
SUPFAM:SSF57756 GO:GO:0016070 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 GO:GO:0003724
InterPro:IPR014014 PROSITE:PS51195 GO:GO:0043186
GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772 EMBL:FO080897
PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/193 (29%), Positives = 87/193 (45%)
Query: 24 ARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEG-FNVFKSSKQL 82
A F N ++ D F GE+ P K + + R + E G FN + +
Sbjct: 216 AGFGNNGGNDGFGGDGGFGGGEERGPMKCF-NCKGEGHRSAECPEPPRGCFNCGEQGHRS 274
Query: 83 --VPAVDKEKEKVE-DGPSKA--------KKELNKQ-IERDAVFRKKYNIHV----SGAN 126
P K +E VE +GP + N Q I +F K ++ V S
Sbjct: 275 NECPNPAKPREGVEGEGPKATYVPVEDNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKT 334
Query: 127 VP-SPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
V P +TF + + E+ + +N+A GY + TPIQ+ A+P++ + ACA TGSG
Sbjct: 335 VGIKPCKTFAEANLT---ET-MQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSG 390
Query: 186 KTLAFLCPMLMKL 198
KT AFL P++ +L
Sbjct: 391 KTAAFLLPIMTRL 403
>UNIPROTKB|P34689 [details] [associations]
symbol:glh-1 "ATP-dependent RNA helicase glh-1"
species:6239 "Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR001878 InterPro:IPR011545 Pfam:PF00098 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50158 PROSITE:PS51194
SMART:SM00343 SMART:SM00490 GO:GO:0005524 GO:GO:0006915
GO:GO:0046872 GO:GO:0008270 GO:GO:0003723 GO:GO:0009791
GO:GO:0007281 Gene3D:4.10.60.10 SUPFAM:SSF57756 GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 GO:GO:0003724 InterPro:IPR014014 PROSITE:PS51195
GO:GO:0043186 GeneTree:ENSGT00620000087942 EMBL:L19948 EMBL:U62772
EMBL:FO080897 PIR:A48686 PIR:C87818 PIR:T15132 RefSeq:NP_491963.1
ProteinModelPortal:P34689 SMR:P34689 IntAct:P34689 STRING:P34689
PaxDb:P34689 EnsemblMetazoa:T21G5.3 GeneID:172414
KEGG:cel:CELE_T21G5.3 UCSC:T21G5.3 CTD:172414 WormBase:T21G5.3
InParanoid:P34689 OMA:HRSNECT NextBio:875417 Uniprot:P34689
Length = 763
Score = 141 (54.7 bits), Expect = 2.7e-07, P = 2.7e-07
Identities = 57/193 (29%), Positives = 87/193 (45%)
Query: 24 ARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEG-FNVFKSSKQL 82
A F N ++ D F GE+ P K + + R + E G FN + +
Sbjct: 216 AGFGNNGGNDGFGGDGGFGGGEERGPMKCF-NCKGEGHRSAECPEPPRGCFNCGEQGHRS 274
Query: 83 --VPAVDKEKEKVE-DGPSKA--------KKELNKQ-IERDAVFRKKYNIHV----SGAN 126
P K +E VE +GP + N Q I +F K ++ V S
Sbjct: 275 NECPNPAKPREGVEGEGPKATYVPVEDNMEDVFNMQKISEGLMFNKFFDAEVKLTSSEKT 334
Query: 127 VP-SPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
V P +TF + + E+ + +N+A GY + TPIQ+ A+P++ + ACA TGSG
Sbjct: 335 VGIKPCKTFAEANLT---ET-MQKNVAHAGYSKTTPIQQYALPLVHQGYDIMACAQTGSG 390
Query: 186 KTLAFLCPMLMKL 198
KT AFL P++ +L
Sbjct: 391 KTAAFLLPIMTRL 403
>SGD|S000005730 [details] [associations]
symbol:DED1 "ATP-dependent DEAD (Asp-Glu-Ala-Asp)-box RNA
helicase" species:4932 "Saccharomyces cerevisiae" [GO:0006413
"translational initiation" evidence=IEA;IMP] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA;IC]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=IMP;IDA]
[GO:0033592 "RNA strand annealing activity" evidence=IDA]
[GO:0003743 "translation initiation factor activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0006412 "translation" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 SGD:S000005730 GO:GO:0005524 GO:GO:0005737
EMBL:BK006948 GO:GO:0006413 GO:GO:0003743 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00620000087942
HOGENOM:HOG000268804 KO:K11594 OrthoDB:EOG4XPTQ4 OMA:GNWANAN
EMBL:X57278 EMBL:Z75110 EMBL:X03245 PIR:S13653 RefSeq:NP_014847.3
RefSeq:NP_014849.3 ProteinModelPortal:P06634 SMR:P06634
DIP:DIP-5820N IntAct:P06634 MINT:MINT-697363 STRING:P06634
PaxDb:P06634 PeptideAtlas:P06634 EnsemblFungi:YOR204W GeneID:854379
GeneID:854381 KEGG:sce:YOR204W KEGG:sce:YOR206W CYGD:YOR204w
KO:K14833 SABIO-RK:P06634 NextBio:976514 Genevestigator:P06634
GermOnline:YOR204W GO:GO:0033592 Uniprot:P06634
Length = 604
Score = 140 (54.3 bits), Expect = 2.8e-07, P = 2.8e-07
Identities = 28/76 (36%), Positives = 44/76 (57%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ SG +VP P+ F + LL N+ + +PTP+Q+ ++P++ + R+ AC
Sbjct: 130 VDASGKDVPEPITEFTSPP----LDGLLLENIKLARFTKPTPVQKYSVPIVANGRDLMAC 185
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT FL P+L
Sbjct: 186 AQTGSGKTGGFLFPVL 201
>FB|FBgn0010220 [details] [associations]
symbol:Dbp45A "DEAD box protein 45A" species:7227 "Drosophila
melanogaster" [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISS;NAS] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000381 "regulation of
alternative mRNA splicing, via spliceosome" evidence=IMP]
[GO:0005634 "nucleus" evidence=IC] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 EMBL:AE013599
GO:GO:0005524 GO:GO:0005634 GO:GO:0003723 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0004004 GO:GO:0000381
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 KO:K14778
GeneTree:ENSGT00670000098028 EMBL:L13612 EMBL:Z23266 EMBL:AY058728
PIR:S38329 RefSeq:NP_476927.1 UniGene:Dm.4231
ProteinModelPortal:Q07886 SMR:Q07886 PaxDb:Q07886
EnsemblMetazoa:FBtr0088564 GeneID:35917 KEGG:dme:Dmel_CG12759
CTD:35917 FlyBase:FBgn0010220 InParanoid:Q07886 OMA:CQLLSMT
OrthoDB:EOG431ZDJ PhylomeDB:Q07886 GenomeRNAi:35917 NextBio:795815
Bgee:Q07886 GermOnline:CG12759 Uniprot:Q07886
Length = 521
Score = 139 (54.0 bits), Expect = 3.0e-07, P = 3.0e-07
Identities = 26/57 (45%), Positives = 38/57 (66%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +L++ L +LG K TPIQ++ IP +L+ ++C A TGSGKT AF P+L +L
Sbjct: 13 GLRPWLVKQLTKLGLKGATPIQQKCIPAILAGQDCIGAAKTGSGKTFAFALPILERL 69
>UNIPROTKB|J3QRQ7 [details] [associations]
symbol:DDX5 "Probable ATP-dependent RNA helicase DDX5"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0001701
"in utero embryonic development" evidence=IEA] [GO:0003712
"transcription cofactor activity" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IEA] [GO:0005516
"calmodulin binding" evidence=IEA] [GO:0007623 "circadian rhythm"
evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0045069 "regulation of viral genome replication" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0048306 "calcium-dependent protein binding"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 PROSITE:PS51192 GO:GO:0008026
EMBL:AC009994 InterPro:IPR014014 PROSITE:PS51195 HGNC:HGNC:2746
ChiTaRS:DDX5 Ensembl:ENST00000577922 Uniprot:J3QRQ7
Length = 212
Score = 131 (51.2 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 35/110 (31%), Positives = 57/110 (51%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK ++ P A++ +++E +R+ I V G N P P+ F + + F ++
Sbjct: 55 EKNFYQEHPDLARRTA-QEVE---TYRRSKEITVRGHNCPKPVLNFYE--ANFPAN--VM 106
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+A + EPT IQ Q PV LS + A TGSGKTL++L P ++ +
Sbjct: 107 DVIARQNFTEPTAIQAQGWPVALSGLDMVGVAQTGSGKTLSYLLPAIVHI 156
>ZFIN|ZDB-GENE-030131-925 [details] [associations]
symbol:ddx5 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
5" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 ZFIN:ZDB-GENE-030131-925 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
EMBL:BX085195 IPI:IPI00488168 Ensembl:ENSDART00000055492
ArrayExpress:F1Q5L6 Bgee:F1Q5L6 Uniprot:F1Q5L6
Length = 617
Score = 139 (54.0 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 34/110 (30%), Positives = 60/110 (54%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK ++ P A++ +++E +R+ I V G + P P+ F + + F Y++
Sbjct: 57 EKNFYQENPDVARRSA-QEVEH---YRRSKEITVKGRDGPKPIVKFHE--ANF--PKYVM 108
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ + + +PTPIQ Q PV LS ++ A TGSGKTL++L P ++ +
Sbjct: 109 DVITKQNWTDPTPIQAQGWPVALSGKDMVGIAQTGSGKTLSYLLPAIVHI 158
>MGI|MGI:2385884 [details] [associations]
symbol:Ddx27 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 27"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008150
"biological_process" evidence=ND] [GO:0016787 "hydrolase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 MGI:MGI:2385884 GO:GO:0005524
GO:GO:0005634 EMBL:CH466551 GO:GO:0003676 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 CTD:55661
GeneTree:ENSGT00550000074997 HOGENOM:HOG000265456
HOVERGEN:HBG106162 KO:K13181 OMA:TRTFTDH OrthoDB:EOG4NVZJV
EMBL:AK134274 EMBL:AK138442 EMBL:AL591711 EMBL:BC011321
EMBL:BC024730 EMBL:BC026381 IPI:IPI00122038 IPI:IPI00230236
RefSeq:NP_694705.2 UniGene:Mm.295031 ProteinModelPortal:Q921N6
SMR:Q921N6 PhosphoSite:Q921N6 PaxDb:Q921N6 PRIDE:Q921N6
Ensembl:ENSMUST00000018143 Ensembl:ENSMUST00000150571 GeneID:228889
KEGG:mmu:228889 UCSC:uc008nza.1 InParanoid:Q3UUG2 NextBio:379240
Bgee:Q921N6 CleanEx:MM_DDX27 Genevestigator:Q921N6
GermOnline:ENSMUSG00000017999 Uniprot:Q921N6
Length = 760
Score = 136 (52.9 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 195 LLKAITAMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 246
Score = 41 (19.5 bits), Expect = 4.1e-07, Sum P(2) = 4.1e-07
Identities = 22/93 (23%), Positives = 40/93 (43%)
Query: 28 ENKESENLADDFSFVEGEKT-DPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAV 86
+ S + DF F E E D A+ + + K+K A T++ + + V
Sbjct: 44 QKNRSADFNPDFVFTEKEGMYDGSWALADVMSQLKKKR-AATTLD---------EKIEKV 93
Query: 87 DKEKEKVEDGPSKAKKELNKQIERDAVFRKKYN 119
K + K ED +K+ K K+ + D+ + + N
Sbjct: 94 RKRR-KAEDKEAKSGKVEEKEGQADSDLKGQEN 125
Score = 35 (17.4 bits), Expect = 1.7e-06, Sum P(2) = 1.7e-06
Identities = 13/50 (26%), Positives = 22/50 (44%)
Query: 31 ESENLADDFSFVEGE-KTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSS 79
+ E+ D+S + E T + V KK+K+ AG E + + S
Sbjct: 134 KDEDSETDYSSEDEEILTKADTLKVKEKKKKKKGQAAGGFFEDASEYDKS 183
>UNIPROTKB|F1NTK9 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003714 "transcription corepressor
activity" evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA]
[GO:0006396 "RNA processing" evidence=IEA] [GO:0030331 "estrogen
receptor binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003714 GO:GO:0005730 GO:GO:0003723 GO:GO:0006396
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00550000075100
EMBL:AADN02043183 IPI:IPI00582285 ProteinModelPortal:F1NTK9
Ensembl:ENSGALT00000012108 Uniprot:F1NTK9
Length = 822
Score = 140 (54.3 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 29/56 (51%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L R+ A A TGSGKT FL PM +L+
Sbjct: 44 SYPVFKGVMKKGYKVPTPIQRKTIPVILRGRDVVAMARTGSGKTACFLLPMFERLK 99
>UNIPROTKB|Q9KLE2 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:243277 "Vibrio cholerae O1 biovar El Tor str. N16961"
[GO:0000910 "cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISS] [GO:0016070 "RNA metabolic
process" evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 139 (54.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 130 PLR-TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTL 188
P++ T ++ S S +L L E+G+ PTPIQ AIPVLL R+ A TG+GKT
Sbjct: 20 PMQDTAIQFSD-LALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTA 78
Query: 189 AFLCPMLMKLRV 200
AF P+L KL +
Sbjct: 79 AFSLPLLNKLNL 90
>TIGR_CMR|VC_A0804 [details] [associations]
symbol:VC_A0804 "ATP-dependent RNA helicase DeaD"
species:686 "Vibrio cholerae O1 biovar El Tor" [GO:0000910
"cytokinesis" evidence=ISS] [GO:0004004 "ATP-dependent RNA helicase
activity" evidence=ISS] [GO:0016070 "RNA metabolic process"
evidence=ISS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
GO:GO:0000910 EMBL:AE003853 GenomeReviews:AE003853_GR GO:GO:0016070
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0004004
InterPro:IPR014014 PROSITE:PS51195 KO:K05592 InterPro:IPR005580
Pfam:PF03880 HSSP:P10081 OMA:ILFMTPR PIR:C82415 RefSeq:NP_233190.1
ProteinModelPortal:Q9KLE2 DNASU:2612819 GeneID:2612819
KEGG:vch:VCA0804 PATRIC:20086156 ProtClustDB:CLSK789062
Uniprot:Q9KLE2
Length = 663
Score = 139 (54.0 bits), Expect = 4.3e-07, P = 4.3e-07
Identities = 32/72 (44%), Positives = 43/72 (59%)
Query: 130 PLR-TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTL 188
P++ T ++ S S +L L E+G+ PTPIQ AIPVLL R+ A TG+GKT
Sbjct: 20 PMQDTAIQFSD-LALNSAILSALTEMGFVSPTPIQAAAIPVLLEGRDALGKAQTGTGKTA 78
Query: 189 AFLCPMLMKLRV 200
AF P+L KL +
Sbjct: 79 AFSLPLLNKLNL 90
>RGD|1549712 [details] [associations]
symbol:Ddx18 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 18"
species:10116 "Rattus norvegicus" [GO:0003723 "RNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA;ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS51194 SMART:SM00490 RGD:1549712 GO:GO:0005524
GO:GO:0005730 GO:GO:0003723 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 InterPro:IPR025313 Pfam:PF13959
HOGENOM:HOG000268799 KO:K13179 OMA:KDGYRSY
GeneTree:ENSGT00680000100037 CTD:8886 HOVERGEN:HBG105702
OrthoDB:EOG4894MF EMBL:AC128353 EMBL:BC083919 IPI:IPI00367078
RefSeq:NP_001006997.1 UniGene:Rn.26598 STRING:Q5XHY0
Ensembl:ENSRNOT00000037203 GeneID:308490 KEGG:rno:308490
UCSC:RGD:1549712 InParanoid:Q5XHY0 NextBio:658990
Genevestigator:Q5XHY0 Uniprot:Q5XHY0
Length = 674
Score = 139 (54.0 bits), Expect = 4.4e-07, P = 4.4e-07
Identities = 52/183 (28%), Positives = 89/183 (48%)
Query: 24 ARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLV 83
A+ K++ + + + TDPE KK+K++ I +T + K+ +
Sbjct: 81 AKVKKSPQKLTILTNGEAAAMPSTDPELKK----KKKKKRKIGNDTEP--DPKKAKTEEG 134
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQI-ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
+E E + P A +E + E D + V+GA + +F LS+
Sbjct: 135 TEAREEPEGAGEEPEGAGEEPEDGVKEADDSEVPSLPLGVTGAFEDT---SFASLSNLVN 191
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML-MKLRVL 201
E+ L+ + E+G+K T IQ ++I LL R+ A A TGSGKTLAFL P++ + +++
Sbjct: 192 -EN-TLKAIEEMGFKHMTEIQHKSIRPLLEGRDLLAAAKTGSGKTLAFLIPVIELIVKLK 249
Query: 202 FIP 204
F+P
Sbjct: 250 FMP 252
>ASPGD|ASPL0000062195 [details] [associations]
symbol:AN10125 species:162425 "Emericella nidulans"
[GO:0008150 "biological_process" evidence=ND] [GO:0005730
"nucleolus" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:BN001308 GO:GO:0003676 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
OMA:RIRKRDH EnsemblFungi:CADANIAT00001822 Uniprot:C8VQD7
Length = 814
Score = 139 (54.0 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 41/128 (32%), Positives = 62/128 (48%)
Query: 78 SSKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVK 136
S P + E E D ++++ + ++ +R A F + A S R+F
Sbjct: 244 SDSVATPVHHPDDEASEPDSDAESEVDAEEEAKRKAFFAPEEKTDEDAAT-NSAKRSF-- 300
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
F +LR LA + + PTPIQ++ IPV L ++ A TGSGKT AF+ P+L
Sbjct: 301 --QEFNLSRPILRGLAAVNFTNPTPIQQKTIPVALLGKDIVGSAVTGSGKTAAFVVPILE 358
Query: 197 KLRVLFIP 204
+L LF P
Sbjct: 359 RL--LFRP 364
Score = 37 (18.1 bits), Expect = 4.4e-07, Sum P(2) = 4.4e-07
Identities = 9/26 (34%), Positives = 13/26 (50%)
Query: 27 KENKESENLADDFSFVEGEKTDPEKA 52
+E E + +DD EGE D + A
Sbjct: 216 EEETEGNDESDDEDEEEGEDDDDDAA 241
>UNIPROTKB|I3LQ10 [details] [associations]
symbol:LOC100626268 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074997 Ensembl:ENSSSCT00000028964 OMA:RYLVALC
Uniprot:I3LQ10
Length = 684
Score = 135 (52.6 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 26/52 (50%), Positives = 37/52 (71%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL+ + +G+K+PTPIQ+ IPV L ++ ACA TG+GKT AF P+L +L
Sbjct: 222 LLKAITVMGFKQPTPIQKACIPVGLLGKDICACAATGTGKTAAFALPVLERL 273
Score = 41 (19.5 bits), Expect = 4.6e-07, Sum P(2) = 4.6e-07
Identities = 21/83 (25%), Positives = 35/83 (42%)
Query: 28 ENKESENLADDFSFVEGEKT-DPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAV 86
+ S + DF F E E D AM + + K+K A T++ + + V
Sbjct: 69 QKNRSADFNPDFVFTEKEGMYDGSWAMADVMSQLKKKR-AATTLD---------EKIEKV 118
Query: 87 DKEKEKVEDGPSKAKKELNKQIE 109
K K K ED +K+ K+++
Sbjct: 119 RK-KRKTEDKEAKSGNSDEKEVK 140
Score = 38 (18.4 bits), Expect = 9.4e-07, Sum P(2) = 9.4e-07
Identities = 12/36 (33%), Positives = 17/36 (47%)
Query: 84 PAVDKEKEKVEDGPSK-AKKELNKQIERDAVFRKKY 118
P D E E+ E+GP +K+ Q R A F +
Sbjct: 46 PETDSEDEE-EEGPIVLGRKQKALQKNRSADFNPDF 80
>FB|FBgn0037549 [details] [associations]
symbol:CG7878 species:7227 "Drosophila melanogaster"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0004386 "helicase activity" evidence=ISS] [GO:0003723 "RNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR004087
InterPro:IPR004088 InterPro:IPR011545 Pfam:PF00013 Pfam:PF00270
Pfam:PF00271 PROSITE:PS00039 PROSITE:PS50084 PROSITE:PS51194
SMART:SM00322 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006200 GO:GO:0003723 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 GeneTree:ENSGT00660000095174
HSSP:P10081 OMA:VLDITHV EMBL:AY051831 RefSeq:NP_649767.1
UniGene:Dm.1098 SMR:Q7K4L8 IntAct:Q7K4L8 EnsemblMetazoa:FBtr0113205
GeneID:40959 KEGG:dme:Dmel_CG7878 UCSC:CG7878-RA
FlyBase:FBgn0037549 InParanoid:Q7K4L8 OrthoDB:EOG47D7XG
GenomeRNAi:40959 NextBio:20818674 Uniprot:Q7K4L8
Length = 703
Score = 139 (54.0 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 36/120 (30%), Positives = 61/120 (50%)
Query: 74 NVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRT 133
N +K + ++ E E++ +E N +I VF K + +P+P+ T
Sbjct: 234 NFYKEAPEVANLTKSEIERI--------REENNKITVSYVFEPKEG--ETSPPIPNPVWT 283
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
F + + + +L + ++G+ +P+PIQ QA P+LL + A TG+GKTLAFL P
Sbjct: 284 FEQCFAEY---PDMLEEITKMGFSKPSPIQSQAWPILLQGHDMIGIAQTGTGKTLAFLLP 340
>UNIPROTKB|Q0C354 [details] [associations]
symbol:rhlE "ATP-dependent RNA helicase RhlE"
species:228405 "Hyphomonas neptunium ATCC 15444" [GO:0006139
"nucleobase-containing compound metabolic process" evidence=ISS]
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:CP000158
GenomeReviews:CP000158_GR GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268807 KO:K11927
RefSeq:YP_759839.1 ProteinModelPortal:Q0C354 STRING:Q0C354
GeneID:4290097 KEGG:hne:HNE_1118 PATRIC:32215041 OMA:KHGSEKL
BioCyc:HNEP228405:GI69-1155-MONOMER Uniprot:Q0C354
Length = 464
Score = 137 (53.3 bits), Expect = 4.7e-07, P = 4.7e-07
Identities = 27/57 (47%), Positives = 37/57 (64%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +L +L + GY PTPIQ QAIP+++ R+ A TG+GKTLAF P+L +L
Sbjct: 13 GLTGRILTSLTKAGYTAPTPIQEQAIPLVIQGRDIVGLAQTGTGKTLAFAAPILDRL 69
>ZFIN|ZDB-GENE-080204-77 [details] [associations]
symbol:ddx43 "DEAD (Asp-Glu-Ala-Asp) box polypeptide
43" species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR004087 InterPro:IPR004088 InterPro:IPR011545
Pfam:PF00013 Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039
PROSITE:PS50084 PROSITE:PS51194 SMART:SM00322 SMART:SM00490
ZFIN:ZDB-GENE-080204-77 GO:GO:0005524 GO:GO:0003723
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000268804
GeneTree:ENSGT00660000095174 HOVERGEN:HBG015893 OrthoDB:EOG43BMNQ
EMBL:BX890626 EMBL:CR354610 IPI:IPI00886666 UniGene:Dr.41756
Ensembl:ENSDART00000101479 OMA:IDITSIT Uniprot:B8A609
Length = 719
Score = 139 (54.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 35/102 (34%), Positives = 57/102 (55%)
Query: 99 KAKKELNKQIERDAVFRKKYN-IHVSGAN------VPSPLRTFVKLSSRFGCESYLLRNL 151
+AK + E ++RK+ N I V +P+P+ TF + + + ++ N+
Sbjct: 237 EAKSVAARSAEEVKIWRKENNNIFVDDLKDGDKRTIPNPVCTFEEAFAHY---PGIMENI 293
Query: 152 AELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+G+K+PTPIQ QA PV+L+ + A TG+GKTLA+L P
Sbjct: 294 VRVGFKKPTPIQSQAWPVVLNGIDLIGIAQTGTGKTLAYLLP 335
>UNIPROTKB|Q3AFI3 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G + LL+ + +LG++ PTPIQ++AIP++L APTG+GKT A+L P+L +++
Sbjct: 6 KLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQ 65
>TIGR_CMR|CHY_0229 [details] [associations]
symbol:CHY_0229 "ATP-dependent RNA helicase, DEAD box
family" species:246194 "Carboxydothermus hydrogenoformans Z-2901"
[GO:0004004 "ATP-dependent RNA helicase activity" evidence=ISS]
[GO:0008150 "biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
EMBL:CP000141 GenomeReviews:CP000141_GR GO:GO:0003676
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268810 KO:K05592 RefSeq:YP_359101.1
ProteinModelPortal:Q3AFI3 STRING:Q3AFI3 GeneID:3727044
KEGG:chy:CHY_0229 PATRIC:21273641 OMA:YAAKGLH
BioCyc:CHYD246194:GJCN-230-MONOMER Uniprot:Q3AFI3
Length = 430
Score = 136 (52.9 bits), Expect = 5.5e-07, P = 5.5e-07
Identities = 25/60 (41%), Positives = 42/60 (70%)
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G + LL+ + +LG++ PTPIQ++AIP++L APTG+GKT A+L P+L +++
Sbjct: 6 KLGLITPLLKAVNDLGFEMPTPIQKEAIPLILEGHNLVGQAPTGTGKTAAYLLPVLQRIQ 65
>MGI|MGI:1919240 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=ISO]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0004004 "ATP-dependent
RNA helicase activity" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005102 "receptor binding"
evidence=ISO] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006396 "RNA processing" evidence=ISO]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0016070 "RNA metabolic process" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1919240 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
GeneTree:ENSGT00550000075100 CTD:79039 HOVERGEN:HBG051333
EMBL:AF319547 EMBL:BC043699 IPI:IPI00875042 RefSeq:NP_082317.1
UniGene:Mm.24495 ProteinModelPortal:Q8K4L0 SMR:Q8K4L0 STRING:Q8K4L0
PhosphoSite:Q8K4L0 PaxDb:Q8K4L0 PRIDE:Q8K4L0
Ensembl:ENSMUST00000031598 GeneID:71990 KEGG:mmu:71990
UCSC:uc008zhq.1 NextBio:335150 Bgee:Q8K4L0 CleanEx:MM_DDX54
Genevestigator:Q8K4L0 Uniprot:Q8K4L0
Length = 874
Score = 139 (54.0 bits), Expect = 6.2e-07, P = 6.2e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT FL PM +L+
Sbjct: 103 SYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLK 158
>TIGR_CMR|CPS_1125 [details] [associations]
symbol:CPS_1125 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195
HOGENOM:HOG000268807 KO:K11927 RefSeq:YP_267868.1
ProteinModelPortal:Q486Z7 STRING:Q486Z7 GeneID:3520292
KEGG:cps:CPS_1125 PATRIC:21465509 OMA:AYSKYLR
BioCyc:CPSY167879:GI48-1206-MONOMER Uniprot:Q486Z7
Length = 466
Score = 136 (52.9 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 26/57 (45%), Positives = 37/57 (64%)
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G LL+ + + GY+ P+PIQ QAIP ++S R+ A A TG+GKT F P+L +L
Sbjct: 12 GLSEALLKAVRDKGYETPSPIQAQAIPAVISGRDVMAAAQTGTGKTAGFTLPLLQRL 68
>UNIPROTKB|Q8TDD1 [details] [associations]
symbol:DDX54 "ATP-dependent RNA helicase DDX54"
species:9606 "Homo sapiens" [GO:0003723 "RNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0004004
"ATP-dependent RNA helicase activity" evidence=IDA] [GO:0003714
"transcription corepressor activity" evidence=IDA] [GO:0005102
"receptor binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA] [GO:0006396
"RNA processing" evidence=IDA] [GO:0016070 "RNA metabolic process"
evidence=IDA] [GO:0030331 "estrogen receptor binding" evidence=IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=TAS] InterPro:IPR000629 InterPro:IPR001650
InterPro:IPR011545 InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271
Pfam:PF08147 ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730
GO:GO:0006355 GO:GO:0006351 GO:GO:0003723 GO:GO:0006396
GO:GO:0030331 GO:GO:0030520 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0004004 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 KO:K14808 HOGENOM:HOG000246455 OMA:FYIPYRP
EMBL:AF478457 EMBL:AC089999 EMBL:AY148094 EMBL:BC005848
IPI:IPI00152510 IPI:IPI00879999 RefSeq:NP_001104792.1
RefSeq:NP_076977.3 UniGene:Hs.506861 ProteinModelPortal:Q8TDD1
SMR:Q8TDD1 IntAct:Q8TDD1 STRING:Q8TDD1 PhosphoSite:Q8TDD1
DMDM:46576615 SWISS-2DPAGE:Q8TDD1 PaxDb:Q8TDD1 PRIDE:Q8TDD1
DNASU:79039 Ensembl:ENST00000306014 Ensembl:ENST00000314045
GeneID:79039 KEGG:hsa:79039 UCSC:uc001tup.3 UCSC:uc001tuq.4
CTD:79039 GeneCards:GC12M113595 HGNC:HGNC:20084 HPA:HPA028244
MIM:611665 neXtProt:NX_Q8TDD1 PharmGKB:PA134992026
HOVERGEN:HBG051333 InParanoid:Q8TDD1 ChiTaRS:DDX54 GenomeRNAi:79039
NextBio:67773 ArrayExpress:Q8TDD1 Bgee:Q8TDD1 CleanEx:HS_DDX54
Genevestigator:Q8TDD1 GermOnline:ENSG00000123064 Uniprot:Q8TDD1
Length = 881
Score = 139 (54.0 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT FL PM +L+
Sbjct: 104 SYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLK 159
>RGD|1562539 [details] [associations]
symbol:Ddx54 "DEAD (Asp-Glu-Ala-Asp) box polypeptide 54"
species:10116 "Rattus norvegicus" [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0003723 "RNA binding"
evidence=IEA] [GO:0004004 "ATP-dependent RNA helicase activity"
evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0006396
"RNA processing" evidence=ISO] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0016070 "RNA metabolic process"
evidence=ISO] [GO:0030331 "estrogen receptor binding" evidence=ISO]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
InterPro:IPR012541 Pfam:PF00270 Pfam:PF00271 Pfam:PF08147
ProDom:PD024971 PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490
RGD:1562539 GO:GO:0005524 GO:GO:0003714 GO:GO:0005730 GO:GO:0003723
GO:GO:0006396 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0004004 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000075100 IPI:IPI00193685
Ensembl:ENSRNOT00000001859 UCSC:RGD:1562539 OrthoDB:EOG469QTB
Uniprot:D3ZHY6
Length = 906
Score = 139 (54.0 bits), Expect = 6.5e-07, P = 6.5e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT FL PM +L+
Sbjct: 103 SYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLLPMFERLK 158
>UNIPROTKB|E2QSR5 [details] [associations]
symbol:DDX54 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003723 "RNA binding" evidence=IEA]
InterPro:IPR001650 InterPro:IPR011545 InterPro:IPR012541
Pfam:PF00270 Pfam:PF00271 Pfam:PF08147 ProDom:PD024971
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003723 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
Ensembl:ENSCAFT00000014352 Uniprot:E2QSR5
Length = 912
Score = 139 (54.0 bits), Expect = 6.6e-07, P = 6.6e-07
Identities = 28/56 (50%), Positives = 38/56 (67%)
Query: 145 SY-LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
SY + + + + GYK PTPIQR+ IPV+L ++ A A TGSGKT FL PM +L+
Sbjct: 104 SYPVFKGIMKKGYKVPTPIQRKTIPVILDGKDVVAMARTGSGKTACFLIPMFERLK 159
>TAIR|locus:2130918 [details] [associations]
symbol:AT4G16630 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA;ISS]
InterPro:IPR000629 InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS00039 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002687 GenomeReviews:CT486007_GR
GO:GO:0003723 EMBL:Z97341 EMBL:AL161544 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513
InterPro:IPR014014 PROSITE:PS51195 HOGENOM:HOG000265456 KO:K13181
OMA:RIRKRDH EMBL:AJ010475 EMBL:AK228353 IPI:IPI00542014 PIR:D71433
PIR:T51310 RefSeq:NP_193396.3 UniGene:At.49
ProteinModelPortal:Q9ZRZ8 SMR:Q9ZRZ8 IntAct:Q9ZRZ8 STRING:Q9ZRZ8
PaxDb:Q9ZRZ8 PRIDE:Q9ZRZ8 EnsemblPlants:AT4G16630.1 GeneID:827364
KEGG:ath:AT4G16630 GeneFarm:955 TAIR:At4g16630 InParanoid:Q9ZRZ8
PhylomeDB:Q9ZRZ8 ProtClustDB:CLSN2690957 Genevestigator:Q9ZRZ8
GermOnline:AT4G16630 Uniprot:Q9ZRZ8
Length = 789
Score = 139 (54.0 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 47/120 (39%), Positives = 63/120 (52%)
Query: 85 AVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
A D E +K E+ S+ + + E DA K + V G + + TF++L+
Sbjct: 124 ASDAETDKQEEYLSEDDEAAEYKPE-DAT-PKPFFSTVDGVSFHAD--TFMELN----LS 175
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIP 204
LLR LGYK+PTPIQ IP+ L+ R+ A A TGSGKT AF P L +L LF P
Sbjct: 176 RPLLRACETLGYKKPTPIQAACIPLALTGRDLCASAITGSGKTAAFALPTLERL--LFRP 233
Score = 35 (17.4 bits), Expect = 6.6e-07, Sum P(2) = 6.6e-07
Identities = 11/46 (23%), Positives = 19/46 (41%)
Query: 5 ASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPE 50
+SF F S D+ + + + E E A++ E E + E
Sbjct: 3 SSFFFEDASDDELELIRNQEDSSEEDVKEGEAEEHEAGEDEDGEEE 48
>TIGR_CMR|CPS_1418 [details] [associations]
symbol:CPS_1418 "ATP-dependent RNA helicase, DEAD box
family" species:167879 "Colwellia psychrerythraea 34H" [GO:0004004
"ATP-dependent RNA helicase activity" evidence=ISS] [GO:0016070
"RNA metabolic process" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:CP000083 GenomeReviews:CP000083_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
eggNOG:COG0513 InterPro:IPR014014 PROSITE:PS51195 OMA:FRNLCAI
HOGENOM:HOG000268807 RefSeq:YP_268161.1 ProteinModelPortal:Q485V4
GeneID:3523021 KEGG:cps:CPS_1418 PATRIC:21466051
BioCyc:CPSY167879:GI48-1499-MONOMER Uniprot:Q485V4
Length = 401
Score = 135 (52.6 bits), Expect = 6.7e-07, P = 6.7e-07
Identities = 25/52 (48%), Positives = 40/52 (76%)
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+L +A+LGY +PT IQ++AIPV+L+ ++ A A TG+GKT +F+ P+L +L
Sbjct: 12 ILNAIADLGYTKPTAIQQKAIPVVLAGKDIIAAAQTGTGKTASFVLPLLEQL 63
>DICTYBASE|DDB_G0281841 [details] [associations]
symbol:ddx24 "DEAD/DEAH box helicase" species:44689
"Dictyostelium discoideum" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0003723 "RNA binding" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR011545
Pfam:PF00270 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
dictyBase:DDB_G0281841 GO:GO:0005524 GenomeReviews:CM000152_GR
GO:GO:0003723 EMBL:AAFI02000043 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 eggNOG:COG0513 InterPro:IPR014014
PROSITE:PS51195 RefSeq:XP_640452.1 ProteinModelPortal:Q54TD7
EnsemblProtists:DDB0234200 GeneID:8623265 KEGG:ddi:DDB_G0281841
KO:K14805 OMA:NIDHVAH Uniprot:Q54TD7
Length = 940
Score = 139 (54.0 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 43/165 (26%), Positives = 78/165 (47%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKE---KVEDGPSK 99
E ++ P+K KK +K + E E K +++ ++EKE +++ K
Sbjct: 194 EQKQKQPQKQPQQPNKKNNKKELQKEEEEQMEEEKEEEEVQQEEEEEKEIKKPIKEKKVK 253
Query: 100 AKKELN---KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLS--SRFGCESYLLRNLAEL 154
+K++ K I + +K+ I + + + +S + + + +L+ L L
Sbjct: 254 TQKQIEAAKKNINKLEKIKKRKEISEQ-KTISKEEQDQLDMSEWNSYNLDPLILKGLRSL 312
Query: 155 GYKEPTPIQRQAIPVLLSDR-ECFACAPTGSGKTLAFLCPMLMKL 198
G+ +PT IQ IPV +S + A TGSGKTLAF PM+ ++
Sbjct: 313 GFSKPTEIQSSVIPVAVSSGYDVIGAAQTGSGKTLAFGIPMVQRI 357
>UNIPROTKB|F1NSN3 [details] [associations]
symbol:DDX28 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] InterPro:IPR011545 Pfam:PF00270 GO:GO:0005524
GO:GO:0005730 GO:GO:0003676 GO:GO:0042645 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0008026 InterPro:IPR014014 PROSITE:PS51195
GeneTree:ENSGT00550000074946 EMBL:AADN02038196 IPI:IPI00579893
Ensembl:ENSGALT00000005401 Uniprot:F1NSN3
Length = 233
Score = 130 (50.8 bits), Expect = 7.1e-07, P = 7.1e-07
Identities = 29/62 (46%), Positives = 36/62 (58%)
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
L + G +S LL L +L PT +QR AIP L R A TGSGKTLA+L P+L
Sbjct: 132 LFAEMGLQSALLTALQDLSIARPTAVQRLAIPALRRGRSALCAAETGSGKTLAYLLPLLD 191
Query: 197 KL 198
+L
Sbjct: 192 RL 193
>UNIPROTKB|Q8ECL2 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase DEAD box family"
species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 135 (52.6 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G + L L ELGY PTP+Q IP +LS R+ A A TGSGKT AF P+L +L
Sbjct: 12 AELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRL 71
>TIGR_CMR|SO_3125 [details] [associations]
symbol:SO_3125 "ATP-dependent RNA helicase, DEAD box
family" species:211586 "Shewanella oneidensis MR-1" [GO:0008150
"biological_process" evidence=ND] [GO:0008026 "ATP-dependent
helicase activity" evidence=ISS] InterPro:IPR000629
InterPro:IPR001650 InterPro:IPR011545 Pfam:PF00270 Pfam:PF00271
PROSITE:PS00039 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 EMBL:AE014299 GenomeReviews:AE014299_GR
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR014014 PROSITE:PS51195 HSSP:P10081 HOGENOM:HOG000268807
ProtClustDB:CLSK907013 RefSeq:NP_718686.1 ProteinModelPortal:Q8ECL2
GeneID:1170814 KEGG:son:SO_3125 PATRIC:23525896 OMA:AHLIKQH
Uniprot:Q8ECL2
Length = 427
Score = 135 (52.6 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 29/60 (48%), Positives = 36/60 (60%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ G + L L ELGY PTP+Q IP +LS R+ A A TGSGKT AF P+L +L
Sbjct: 12 AELGIIAPLGNRLTELGYVSPTPVQAATIPAVLSGRDVLAGANTGSGKTAAFALPLLQRL 71
WARNING: HSPs involving 249 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.136 0.389 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 211 211 0.00081 112 3 11 22 0.36 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 499
No. of states in DFA: 551 (59 KB)
Total size of DFA: 146 KB (2090 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 24.22u 0.10s 24.32t Elapsed: 00:00:02
Total cpu time: 24.24u 0.10s 24.34t Elapsed: 00:00:02
Start: Fri May 10 10:45:42 2013 End: Fri May 10 10:45:44 2013
WARNINGS ISSUED: 2