BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028267
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255559765|ref|XP_002520902.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223540033|gb|EEF41611.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 535
Score = 269 bits (688), Expect = 5e-70, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 164/203 (80%), Gaps = 5/203 (2%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLA--DDFSFVEGEKTDPEKAMVSFVK 58
MEKG SFLFAG++F+KKKF TDF+RFKE KE + A DD +E K++P++ VS VK
Sbjct: 1 MEKGTSFLFAGITFNKKKFATDFSRFKEKKECNDNAQTDDLRLLEAGKSEPDQVHVS-VK 59
Query: 59 KRKRKSIAG-ETVEGFNVFKSSKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERDAVFRK 116
KRKRK++A E VEGFNVFKSSK + +++ ++ E D P + KELNKQIERDA+ RK
Sbjct: 60 KRKRKNVASSEKVEGFNVFKSSKSVALPSNQQNDQDEIDQPFRKNKELNKQIERDALLRK 119
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
++IHVSG N+PSPL+ F +LSSR+GCESYLL NL ELG+KEPTPIQRQAIPVLLS REC
Sbjct: 120 HFHIHVSGNNIPSPLQNFSELSSRYGCESYLLHNLVELGFKEPTPIQRQAIPVLLSGREC 179
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
FACAPTGSGKTLAF+CPMLMKL+
Sbjct: 180 FACAPTGSGKTLAFVCPMLMKLK 202
>gi|225439904|ref|XP_002279705.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57 [Vitis vinifera]
Length = 524
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 134/202 (66%), Positives = 160/202 (79%), Gaps = 14/202 (6%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
MEKG SFLF+G++FDKKKF DF+RFKE KES++L VE K++ E+ VKKR
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFSRFKEKKESDDL------VESGKSEAEEGARP-VKKR 53
Query: 61 KRKSIAGETVEGFNVFKSSK---QLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKK 117
KRK+ + VEGFNVFK+SK Q + D+EK ++ S+AKKELN+QIERDA+ RKK
Sbjct: 54 KRKATVADPVEGFNVFKTSKSSAQGIQQNDQEKSEL----SQAKKELNRQIERDALLRKK 109
Query: 118 YNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ IH+SG NVPSPL F +LSSR+GCESYLL NLAELG+KEPTPIQRQAIPVLLS RECF
Sbjct: 110 HKIHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECF 169
Query: 178 ACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKTLAF+CPMLMKL+
Sbjct: 170 ACAPTGSGKTLAFVCPMLMKLK 191
>gi|297741568|emb|CBI32700.3| unnamed protein product [Vitis vinifera]
Length = 523
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 160/202 (79%), Gaps = 15/202 (7%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
MEKG SFLF+G++FDKKKF DF+RFK+ KES++L VE K++ E+ VKKR
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFSRFKK-KESDDL------VESGKSEAEEGARP-VKKR 52
Query: 61 KRKSIAGETVEGFNVFKSSK---QLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKK 117
KRK+ + VEGFNVFK+SK Q + D+EK ++ S+AKKELN+QIERDA+ RKK
Sbjct: 53 KRKATVADPVEGFNVFKTSKSSAQGIQQNDQEKSEL----SQAKKELNRQIERDALLRKK 108
Query: 118 YNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ IH+SG NVPSPL F +LSSR+GCESYLL NLAELG+KEPTPIQRQAIPVLLS RECF
Sbjct: 109 HKIHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIPVLLSGRECF 168
Query: 178 ACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKTLAF+CPMLMKL+
Sbjct: 169 ACAPTGSGKTLAFVCPMLMKLK 190
>gi|147784525|emb|CAN61726.1| hypothetical protein VITISV_032421 [Vitis vinifera]
Length = 554
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 130/202 (64%), Positives = 156/202 (77%), Gaps = 18/202 (8%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
MEKG SFLF+G++FDKKKF DF+RFKE KES++L VE K++ E+ VKKR
Sbjct: 1 MEKGTSFLFSGITFDKKKFAADFSRFKEKKESDDL------VESGKSEAEEG-ARPVKKR 53
Query: 61 KRKSIAGETVEGFNVFKSSK---QLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKK 117
KRK+ + VEGFNVFK+SK Q + D+EK ++ S+AKKELN+QIERDA+ RKK
Sbjct: 54 KRKATVADPVEGFNVFKTSKSSAQGIQQNDQEKSEL----SQAKKELNRQIERDALLRKK 109
Query: 118 YNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ IH+SG NVPSPL F +LSSR+GCESYLL NLAELG+KEPTPIQRQAIP RECF
Sbjct: 110 HXIHISGNNVPSPLENFSELSSRYGCESYLLHNLAELGFKEPTPIQRQAIP----GRECF 165
Query: 178 ACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKTLAF+CPMLMKL+
Sbjct: 166 ACAPTGSGKTLAFVCPMLMKLK 187
>gi|449440077|ref|XP_004137811.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Cucumis
sativus]
Length = 616
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 123/201 (61%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVE-GEKTDPEKAMVSFVKK 59
MEKG SFLFAG+ FDKK+F DFA+F+ KES+N+ + S ++ G+ E + S +K
Sbjct: 1 MEKGTSFLFAGIHFDKKRFAADFAKFEGKKESDNVVEGPSSIDNGDLEVHEGSTPSDKRK 60
Query: 60 RKRKSIAGETVEGFNVFKSSKQLV-PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKY 118
RKRKS ++VEGF+VFK SK ++++E E+ PS+ KKE +++ERDA+FRKKY
Sbjct: 61 RKRKSATAKSVEGFSVFKDSKSTADTSLNEENHLSENDPSEEKKEFYRKLERDALFRKKY 120
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NIHVSG NVPSPL+ F +LS+R+ C+SYLL NL ELG+KEPTPIQRQAIPVLLS RECFA
Sbjct: 121 NIHVSGNNVPSPLQNFGELSTRYDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFA 180
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKTLAF+CPMLM+L+
Sbjct: 181 CAPTGSGKTLAFVCPMLMRLK 201
>gi|224127806|ref|XP_002329182.1| predicted protein [Populus trichocarpa]
gi|222870963|gb|EEF08094.1| predicted protein [Populus trichocarpa]
Length = 531
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 150/201 (74%), Gaps = 7/201 (3%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKE--SENLADDFSFVEGEKTDPEKAMVSFVK 58
MEK SFL G+ F+KK+F DF+RFK+ K+ ++ DD S+ + E T+ EK +VS K
Sbjct: 1 MEKDTSFLLTGIKFNKKRFAGDFSRFKKRKQRNDDSPVDDLSYFKREDTEAEKVVVSVNK 60
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKY 118
KRKRK+ A E VEGF+VFK S + D+ E+ E+ +KELN+Q ERD RKKY
Sbjct: 61 KRKRKTKA-ERVEGFSVFKGSDSVPVVTDEGSEQEENN----QKELNRQNERDLRLRKKY 115
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
IHVSG NVPSPL++F +LS+R+GCESYLL NL +LG+KEPTPIQRQAIPVLLS RECFA
Sbjct: 116 GIHVSGNNVPSPLQSFAELSTRYGCESYLLHNLVKLGFKEPTPIQRQAIPVLLSGRECFA 175
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
APTGSGKTLAF+ PMLMKL+
Sbjct: 176 KAPTGSGKTLAFVYPMLMKLK 196
>gi|297833736|ref|XP_002884750.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
gi|297330590|gb|EFH61009.1| hypothetical protein ARALYDRAFT_478294 [Arabidopsis lyrata subsp.
lyrata]
Length = 539
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 153/207 (73%), Gaps = 13/207 (6%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESE--NLADDFSFVEGEKTDPEKAMVSFVK 58
MEK + FLF G +F+KKKF DFA+FK E + N +F E + + ++ +V F K
Sbjct: 1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNCTEDDDSNKKVNFFVEEEDTEEQKEKVVVFSK 60
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSK------AKKELNKQIERDA 112
KRKR+S VEGF+VFKSSK+ + K K E+G +K KKELN+QIERDA
Sbjct: 61 KRKRRSSNSVPVEGFDVFKSSKKAL-----AKGKAEEGNTKNDILEDPKKELNRQIERDA 115
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+ RK+YNIHVSG N+P PL++F +LSSR+GCE Y+L NLAELG+KEPTPIQRQAIP+LLS
Sbjct: 116 LSRKQYNIHVSGNNIPPPLKSFAELSSRYGCEGYILGNLAELGFKEPTPIQRQAIPILLS 175
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
RECFACAPTGSGKT+AF+CPML+KL+
Sbjct: 176 GRECFACAPTGSGKTVAFICPMLIKLK 202
>gi|356505198|ref|XP_003521379.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 537
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 144/207 (69%), Gaps = 8/207 (3%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVE--GEKT----DPEKAMV 54
M +SFLFAG+ FD+KKF D ARF++ + A S E GEKT + EK
Sbjct: 1 MANDSSFLFAGIRFDRKKFGADIARFQKKDSDTDSAMILSAAEDEGEKTIEPLEEEKVAA 60
Query: 55 SFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEK--EKVEDGPSKAKKELNKQIERDA 112
S KKRKRK + ETVEGFNVF+SS + + D+ + E+ + + KKE NKQ+ERDA
Sbjct: 61 STTKKRKRKGTSSETVEGFNVFRSSTSVAQSNDEVRVIEESVELYNNNKKEQNKQLERDA 120
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FRK++NIHVSG NVPSPL++F +L SR+ C SYLLRNL ELG++EPTPIQRQAIPVLL
Sbjct: 121 IFRKQHNIHVSGYNVPSPLQSFDELKSRYNCPSYLLRNLKELGFREPTPIQRQAIPVLLQ 180
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
RECFACAPTG F+ PMLMKL+
Sbjct: 181 GRECFACAPTGCVVGSYFVWPMLMKLK 207
>gi|6682259|gb|AAF23311.1|AC016661_36 putative RNA helicase [Arabidopsis thaliana]
Length = 545
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 155/208 (74%), Gaps = 9/208 (4%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSF-----VEGEKTDPEKAMVS 55
MEK + FLF G +F+KKKF DFA+FK + E ++ +F + E+ + EK +VS
Sbjct: 1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVS 60
Query: 56 FVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGP--SKAKKELNKQIERDAV 113
KKRKR+S VEGF+VFKSSK+ A K +E++ KKELN+Q+ERDA+
Sbjct: 61 -SKKRKRRSSNSVPVEGFDVFKSSKK-ARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK+Y+IHVSG N+P PL++F +LSSR+GCE Y+LRNLAELG+KEPTPIQRQAIP+LLS
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRVL 201
RECFACAPTGSGKT AF+CPML+KL+VL
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLKVL 206
>gi|22330935|ref|NP_187583.2| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
gi|75328099|sp|Q84TG1.1|RH57_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|29028778|gb|AAO64768.1| At3g09720 [Arabidopsis thaliana]
gi|110742885|dbj|BAE99340.1| RNA helicase like protein [Arabidopsis thaliana]
gi|332641282|gb|AEE74803.1| DEAD-box ATP-dependent RNA helicase 57 [Arabidopsis thaliana]
Length = 541
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 153/206 (74%), Gaps = 9/206 (4%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSF-----VEGEKTDPEKAMVS 55
MEK + FLF G +F+KKKF DFA+FK + E ++ +F + E+ + EK +VS
Sbjct: 1 MEKSSYFLFGGTNFNKKKFAPDFAKFKNSTEDDDSNKKVNFFVEEEEDTEQPEAEKVIVS 60
Query: 56 FVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGP--SKAKKELNKQIERDAV 113
KKRKR+S VEGF+VFKSSK+ A K +E++ KKELN+Q+ERDA+
Sbjct: 61 -SKKRKRRSSNSVPVEGFDVFKSSKK-ARAKGKAEEQITKNEIVENPKKELNRQMERDAL 118
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK+Y+IHVSG N+P PL++F +LSSR+GCE Y+LRNLAELG+KEPTPIQRQAIP+LLS
Sbjct: 119 SRKQYSIHVSGNNIPPPLKSFAELSSRYGCEGYILRNLAELGFKEPTPIQRQAIPILLSG 178
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RECFACAPTGSGKT AF+CPML+KL+
Sbjct: 179 RECFACAPTGSGKTFAFICPMLIKLK 204
>gi|357510607|ref|XP_003625592.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355500607|gb|AES81810.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 145/201 (72%), Gaps = 7/201 (3%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKR 60
M +SFLFAG+ FD+KKF D ARF++ + A + E E++ VS K++
Sbjct: 1 MANDSSFLFAGIHFDRKKFGADIARFQKKDTDNSFAKIQTVTEDEESKETIEAVSGKKRK 60
Query: 61 KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS--KAKKELNKQIERDAVFRKKY 118
++K+ + E V+GF+VF+SS + E+ + +D + KKE NKQ+ERDA+FRK +
Sbjct: 61 RKKT-SSEAVDGFSVFRSST----SKSNEEGQADDNDESIRLKKEQNKQLERDAIFRKNH 115
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NIHVSG NVPSPL++F +L +R+ C SYLL LAELG++EPTPIQRQAIPVLL DRECFA
Sbjct: 116 NIHVSGYNVPSPLQSFDELKTRYKCPSYLLWKLAELGFREPTPIQRQAIPVLLQDRECFA 175
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKTLAF+CPMLMKL+
Sbjct: 176 CAPTGSGKTLAFVCPMLMKLK 196
>gi|449516225|ref|XP_004165148.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like, partial
[Cucumis sativus]
Length = 441
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/179 (58%), Positives = 136/179 (75%), Gaps = 2/179 (1%)
Query: 23 FARFKENKESENLADDFSFVE-GEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQ 81
+A KES+N+ + S ++ G+ E + S +KRKRKS ++VEGF+VFK SK
Sbjct: 49 WAGLHREKESDNVVEGPSSIDNGDLEVHEGSTPSDKRKRKRKSATAKSVEGFSVFKDSKS 108
Query: 82 LV-PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
++++E E+ PS+ KKE +++ERDA+FRKKYNIH+SG NVPSPL+ F +LS+R
Sbjct: 109 TADTSLNEENHLSENDPSEEKKEFYRKLERDALFRKKYNIHISGNNVPSPLQNFGELSTR 168
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ C+SYLL NL ELG+KEPTPIQRQAIPVLLS RECFACAPTGSGKTLAF+CPMLM+L+
Sbjct: 169 YDCDSYLLHNLVELGFKEPTPIQRQAIPVLLSGRECFACAPTGSGKTLAFVCPMLMRLK 227
>gi|356572415|ref|XP_003554364.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like [Glycine
max]
Length = 536
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 144/207 (69%), Gaps = 9/207 (4%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVE--GEKT-DP--EKAMVS 55
M +SFLFAG+ FD+KKF D ARF++ + A S E GEKT +P EK S
Sbjct: 1 MANDSSFLFAGIRFDRKKFGADIARFQKKDSDTDSAKISSAAEDEGEKTIEPVEEKVAAS 60
Query: 56 FVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDK---EKEKVEDGPSKAKKELNKQIERDA 112
KKRKRK + ETVEGFNVF+SS + + D+ +E VE KKE NKQ+ERDA
Sbjct: 61 TTKKRKRKGTSSETVEGFNVFRSSTSVAQSNDEVRVNEESVELNKKTKKKEQNKQLERDA 120
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
FRK++NIHVSG NVP+PL++F +L SR+ C SYLLRNL ELG++EPTPIQRQAIPVLL
Sbjct: 121 KFRKQHNIHVSGYNVPTPLQSFDELKSRYNCPSYLLRNLKELGFREPTPIQRQAIPVLLQ 180
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
RECFACAPTGS +CPMLMKL+
Sbjct: 181 GRECFACAPTGSAPCRC-VCPMLMKLK 206
>gi|115473749|ref|NP_001060473.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|143456709|sp|Q5K5B6.2|RH57_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 57
gi|22093706|dbj|BAC07000.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|23495827|dbj|BAC20037.1| putative ATP-dependent RNA helicase [Oryza sativa Japonica Group]
gi|113612009|dbj|BAF22387.1| Os07g0647900 [Oryza sativa Japonica Group]
gi|125601315|gb|EAZ40891.1| hypothetical protein OsJ_25369 [Oryza sativa Japonica Group]
Length = 540
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 142/223 (63%), Gaps = 38/223 (17%)
Query: 1 MEKG--ASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK 58
MEK +S LFAG FD+K+F DFARF++ + ++A PEK
Sbjct: 1 MEKAKLSSALFAGTHFDRKRFAGDFARFRQGPPAPDVA------SAAAPSPEK------- 47
Query: 59 KRKRKSI----------------AGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS---- 98
KRKR+S A + VEGF+VFK D EK KVE G S
Sbjct: 48 KRKRQSKAKAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEK-KVETGKSEDSE 106
Query: 99 --KAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
+ +KE+ ++IER A+ RKK++IH+SG NVP+PL F +L SR+GC+SYL+ NL++LG+
Sbjct: 107 VVRRRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGF 166
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+EPTPIQRQAIP+LLS RECFACAPTGSGKTLAFL P+LMK++
Sbjct: 167 QEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIK 209
>gi|125559398|gb|EAZ04934.1| hypothetical protein OsI_27114 [Oryza sativa Indica Group]
Length = 540
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 109/223 (48%), Positives = 142/223 (63%), Gaps = 38/223 (17%)
Query: 1 MEKG--ASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK 58
MEK +S LFAG FD+K+F DFARF++ + ++A PEK
Sbjct: 1 MEKAKLSSALFAGTHFDRKRFAGDFARFRQGPPAPDVA------SAAAPSPEK------- 47
Query: 59 KRKRKSI----------------AGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS---- 98
KRKR+S A + VEGF+VFK D EK KVE G S
Sbjct: 48 KRKRQSKAKAKKSKKRRAEGADSASDAVEGFSVFKGLAAKKDEDDSEK-KVETGKSEDSE 106
Query: 99 --KAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
+ +KE+ ++IER A+ RKK++IH+SG NVP+PL F +L SR+GC+SYL+ NL++LG+
Sbjct: 107 VVRRRKEVEREIERAAILRKKFDIHISGQNVPAPLENFEELVSRYGCDSYLVGNLSKLGF 166
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+EPTPIQRQAIP+LLS RECFACAPTGSGKTLAFL P+LMK++
Sbjct: 167 QEPTPIQRQAIPILLSGRECFACAPTGSGKTLAFLFPILMKIK 209
>gi|357121693|ref|XP_003562552.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 57-like
[Brachypodium distachyon]
Length = 539
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 107/221 (48%), Positives = 141/221 (63%), Gaps = 35/221 (15%)
Query: 1 MEKG--ASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK 58
MEKG +S LFAG FD+K+F DFARF++ +E PEK
Sbjct: 1 MEKGKLSSALFAGTHFDRKRFSGDFARFRKG------VPPVPALEATPPAPEK------- 47
Query: 59 KRKRK----------------SIAGETVEGFNVFKSSKQLVPAVDKEK----EKVEDGPS 98
KRKRK + A E VEGF+VFK + A D E+ + V++
Sbjct: 48 KRKRKSKTNAKSKKKKRADGAASASEVVEGFSVFKGVEAKDAAEDSEEVEVGKDVDEEFL 107
Query: 99 KAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ +KE ++IER A+ RK+++IH+SG NVP+PL +F +L SR+GC+SYL+ NL++LGY+E
Sbjct: 108 RRRKEAEREIERAAILRKRFDIHISGLNVPAPLESFEELVSRYGCDSYLVGNLSKLGYQE 167
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQRQAI +LLS RECFACAPTGSGKTLAFL PMLMK++
Sbjct: 168 PTPIQRQAISILLSGRECFACAPTGSGKTLAFLLPMLMKIK 208
>gi|242046786|ref|XP_002461139.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
gi|241924516|gb|EER97660.1| hypothetical protein SORBIDRAFT_02g041390 [Sorghum bicolor]
Length = 546
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/211 (44%), Positives = 135/211 (63%), Gaps = 14/211 (6%)
Query: 3 KGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEK----------A 52
K +S LFAG FD+K+F DFARF++ + A + + +K
Sbjct: 5 KLSSSLFAGTHFDRKRFAADFARFRKGPALPSAAATATAAPSAPSPEKKRKRKSGKAKAK 64
Query: 53 MVSFVKKRKRKSIAGETVEGFNVFKS---SKQLVPAVDKEKEKVEDGPS-KAKKELNKQI 108
+ + + VEGF+VFK S +P+ + K ED + + +KE+ ++I
Sbjct: 65 KNKKKRAEDAAAASSNVVEGFSVFKGLADSNAELPSEKVDMRKDEDSVAVRQRKEIEREI 124
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER AV RK+++IH++G N P+PL +F +L SR+GC+SYL+ NL++LG++EPTPIQRQA+P
Sbjct: 125 ERAAVLRKRFDIHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAMP 184
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+LLS RECFACAPTGSGKTLAFL P+LMK++
Sbjct: 185 ILLSGRECFACAPTGSGKTLAFLFPLLMKIK 215
>gi|414887918|tpg|DAA63932.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 541
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 132/212 (62%), Gaps = 21/212 (9%)
Query: 3 KGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKR 62
K +S LFAG FD+K+F DFARF++ + A + PEK K K
Sbjct: 5 KLSSALFAGTHFDRKRFAADFARFRKGPALPSAATPSA------PSPEKKRKRKSGKAKA 58
Query: 63 KSIAGET-----------VEGFNVFKSSKQLVPAVDKEK---EKVEDGPS-KAKKELNKQ 107
K VEGF+VFK + EK K +D + + +KE+ ++
Sbjct: 59 KKNKKRAQDAAAAASSDFVEGFSVFKGLADNNAELRSEKVDMRKDDDSVAVRRRKEIERE 118
Query: 108 IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
ER AV RK+++IH++G N P+PL +F +L SR+GC+SYL+ NL++LG++EPTPIQRQA+
Sbjct: 119 FERAAVLRKRFDIHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAM 178
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
P+LLS RECFACAPTGSGKTLAFL P+LMK++
Sbjct: 179 PILLSGRECFACAPTGSGKTLAFLFPLLMKIK 210
>gi|414591046|tpg|DAA41617.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 414
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 131/212 (61%), Gaps = 21/212 (9%)
Query: 3 KGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKR 62
K +S LFAG FD+K+F DFARF++ + A PEK K K
Sbjct: 5 KLSSALFAGTHFDRKRFAADFARFRKGPALPSAATP------SAPSPEKKRKRKSGKAKA 58
Query: 63 KSIAGET-----------VEGFNVFKSSKQLVPAVDKEK---EKVEDGPS-KAKKELNKQ 107
K VEGF+VFK + EK K +D + + +KE+ ++
Sbjct: 59 KKNKKRAQDAAAAASSDFVEGFSVFKGLADNNAELRSEKVDMRKDDDSVAVRRRKEIERE 118
Query: 108 IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
ER AV RK+++IH++G N P+PL +F +L SR+GC+SYL+ NL++LG++EPTPIQRQA+
Sbjct: 119 FERAAVLRKRFDIHIAGQNAPAPLESFEELISRYGCDSYLVGNLSKLGFQEPTPIQRQAM 178
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
P+LLS RECFACAPTGSGKTLAFL P+LMK++
Sbjct: 179 PILLSGRECFACAPTGSGKTLAFLFPLLMKIK 210
>gi|302771716|ref|XP_002969276.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
gi|300162752|gb|EFJ29364.1| hypothetical protein SELMODRAFT_410231 [Selaginella moellendorffii]
Length = 449
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 103/194 (53%), Gaps = 60/194 (30%)
Query: 6 SFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSI 65
S LF+GV DKK+F D ARF++ ++S DFS G+
Sbjct: 5 SLLFSGVRIDKKRFSADIARFEKKRKS-----DFSNANGDN------------------- 40
Query: 66 AGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGA 125
AGE +E ++D PS +KK I +G
Sbjct: 41 AGEDLE---------------------LKDIPS---------------LKKKLKIRAAGD 64
Query: 126 NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
NVP PLR+F +LSS + CE L++NL E GYKEPTP+QRQ IPVLL +RECF CAPTGSG
Sbjct: 65 NVPQPLRSFQQLSSEYDCEPNLMKNLVEAGYKEPTPVQRQVIPVLLQERECFVCAPTGSG 124
Query: 186 KTLAFLCPMLMKLR 199
K+LAF+ P+LMKL+
Sbjct: 125 KSLAFILPILMKLK 138
>gi|168011374|ref|XP_001758378.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690413|gb|EDQ76780.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 405
Score = 130 bits (326), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 58/86 (67%), Positives = 70/86 (81%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
RKKY IHVSG +VP+PL F +L +++ C YL++N+ E GY EPTPIQRQAI LL++R
Sbjct: 3 RKKYQIHVSGRDVPAPLVAFEQLRTQYRCRKYLMKNIKEAGYTEPTPIQRQAITTLLAER 62
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLRV 200
ECFACAPTGSGKTLAF P+LMKLRV
Sbjct: 63 ECFACAPTGSGKTLAFSLPILMKLRV 88
>gi|302810291|ref|XP_002986837.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
gi|300145491|gb|EFJ12167.1| hypothetical protein SELMODRAFT_124676 [Selaginella moellendorffii]
Length = 415
Score = 126 bits (316), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 55/86 (63%), Positives = 68/86 (79%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+KK I +G NVP PLR+F +LSS + CE L++NL E GYKEPTP+QRQ IPVLL +
Sbjct: 1 LKKKLKIRAAGDNVPQPLRSFQQLSSEYDCEPNLIKNLVEAGYKEPTPVQRQVIPVLLQE 60
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RECF CAPTGSGK+LAF+ P+LMKL+
Sbjct: 61 RECFVCAPTGSGKSLAFILPILMKLK 86
>gi|383855221|ref|XP_003703115.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Megachile rotundata]
Length = 589
Score = 121 bits (304), Expect = 1e-25, Method: Compositional matrix adjust.
Identities = 76/195 (38%), Positives = 104/195 (53%), Gaps = 8/195 (4%)
Query: 8 LFAGVSFDKKKFVTDFARFK-ENKESENLADDFSFVEGEKTDPEKAMV--SFVKKRKRKS 64
L GV FDKK+F +D RF+ K+SEN+ E T+ M KRK
Sbjct: 10 LSTGVKFDKKRFQSDAERFQLVKKQSENVVK----TENNSTEALNNMNYPMMPMKRKHDD 65
Query: 65 IAGETVEGFNVFKSSKQLVPAV-DKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVS 123
I +T + + VP +K K K P +K+L + E+ FR ++ I+V+
Sbjct: 66 IEEDTKDAGELILVDGMSVPKNGNKVKSKKSKAPITEEKQLKLEQEKINQFRNQHRINVT 125
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G+ VP P+ F +LS +G LL N+ GY +PTPIQ QAIPV+L R+ ACAPTG
Sbjct: 126 GSRVPEPISEFSELSKNYGVSEQLLNNVITCGYVQPTPIQMQAIPVMLQSRQVLACAPTG 185
Query: 184 SGKTLAFLCPMLMKL 198
SGKT AFL P++ L
Sbjct: 186 SGKTAAFLLPIIHHL 200
>gi|355683377|gb|AER97087.1| DEAD box polypeptide 52 [Mustela putorius furo]
Length = 598
Score = 117 bits (294), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 83/228 (36%), Positives = 115/228 (50%), Gaps = 45/228 (19%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEG---------------------EK 46
L G FD K+F D ARF+ K + D ++G E
Sbjct: 10 LGVGAKFDVKRFSADAARFQVGKRKHDF-DSSEILQGLDFFGNKKSVPGECGLSRTHQEL 68
Query: 47 TDPEKAMVSFVKKR------KRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGP 97
D EK S +K+ KRK + ET EG S+ Q + +V+ K+ED
Sbjct: 69 QDEEKKEESLTEKKREQNKKKRKMMLSETTSQEEG-----STIQWISSVEA---KIEDKK 120
Query: 98 SKAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNL 151
K +K+L N + E+ FR K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 121 IKREKKLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNI 180
Query: 152 AELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 181 LDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|335298081|ref|XP_003358192.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sus scrofa]
Length = 599
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 78/224 (34%), Positives = 115/224 (51%), Gaps = 37/224 (16%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSFVK---- 58
L AG FD ++F D ARF+ K +S F +K+ P + S +
Sbjct: 10 LGAGAKFDVRRFSADAARFQIGKRKYDFDSSEALQGLDFFGSKKSVPGECGASGTRQELQ 69
Query: 59 -----------------KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK 101
KRKRK + E V S+ Q + +V+ K+ED K +
Sbjct: 70 DEEKREESLPERKREQNKRKRKKMTSEVTSQEEV--STIQWISSVE---AKIEDTKVKRE 124
Query: 102 KELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
K+L +++ ++ + FR K+ IHV G ++P P+ TF +L + S LL+N+ + G
Sbjct: 125 KKLTSGKLEELRKEKINFFRNKHKIHVQGTDLPDPITTFQQLDQEYKISSRLLQNILDAG 184
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 185 FQLPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|348567701|ref|XP_003469637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Cavia
porcellus]
Length = 594
Score = 115 bits (289), Expect = 8e-24, Method: Compositional matrix adjust.
Identities = 73/215 (33%), Positives = 109/215 (50%), Gaps = 24/215 (11%)
Query: 8 LFAGVSFDKKKFVTDFARF-----KENKESENLADDFSFVEGEKTDPEKAMVSFV----- 57
L AG FD K+F D ARF K + +S + F +K+ P + +
Sbjct: 10 LGAGAKFDVKRFSADAARFQVGKRKHDSDSSEVLQSLDFFGNKKSVPGECTATLTHQELQ 69
Query: 58 -------------KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL 104
KKRK++ + E + + + ++ +K K E+ + K E
Sbjct: 70 NEDKKESKRESNKKKRKKRISEITSQEEGTTIQWTSSVEAQIEDKKVKGENKLTSEKLEH 129
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
++ E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G+ PTPIQ
Sbjct: 130 LRK-EKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFNVPTPIQM 188
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 189 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 223
>gi|291405635|ref|XP_002719293.1| PREDICTED: ATP-dependent RNA helicase ROK1 [Oryctolagus cuniculus]
Length = 599
Score = 114 bits (286), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 82/227 (36%), Positives = 112/227 (49%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKE------SENLAD-DF-------------SFVEGEKT 47
L AG FD ++F D ARF+ K SE L DF S G+
Sbjct: 10 LGAGAKFDVRRFSADAARFQIGKRKCDFDSSEVLQGLDFFGNKKAVPGECAASQTHGQLQ 69
Query: 48 DPEKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
D EK + ++ K+KRK + E EG + Q +V+ K+ED S
Sbjct: 70 DEEKEAATHMEGKREQNKKKRKKVDSEITLQEEGTTI-----QWTSSVEA---KIEDTKS 121
Query: 99 KAKKELNK------QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
K +L + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 KGHTKLTSGKLEHLRKEKINFVRNKHKIHVQGTDLPDPITTFQQLDQEYKINSQLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLK 228
>gi|149724020|ref|XP_001503919.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Equus
caballus]
Length = 597
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/226 (34%), Positives = 114/226 (50%), Gaps = 43/226 (19%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKE-----SENLADDFSFVEGEKTDPEKAMVSFVK---- 58
L AG FD ++F D ARF+ K S + F G K+ P + S
Sbjct: 10 LGAGAKFDVRRFSADAARFQVGKRKYDFGSSEVLQGLDFF-GNKSVPGECGASRTHQELQ 68
Query: 59 ----------------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPSK 99
K+KRK + E EG S+ Q + +V+ K+ED K
Sbjct: 69 DEEKKESLSEGKREQNKKKRKKMTSEITSQEEG-----STIQWISSVEA---KIEDKKLK 120
Query: 100 AKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ +L +Q+ ++ + FR K+ IHV G ++P P+ TF +L + S LL+N+ +
Sbjct: 121 RENKLTSGKLEQLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLEQEYKINSQLLQNILD 180
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 181 AGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 226
>gi|73966874|ref|XP_852958.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Canis lupus
familiaris]
Length = 598
Score = 113 bits (282), Expect = 6e-23, Method: Compositional matrix adjust.
Identities = 79/220 (35%), Positives = 115/220 (52%), Gaps = 30/220 (13%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSF------VEGEK---------T 47
L G FD ++F D ARF+ K +S + F V GE+
Sbjct: 10 LGVGAKFDVRRFSADAARFQVGKRKYDFDSSEVLQGLDFFGNKKSVPGERGASRTHQELQ 69
Query: 48 DPEKAMVSFVK------KRKRKSIAGETV--EGFNVFKSSKQLVPAVDKEKEKVEDGPSK 99
D EK S + K+KRK I+ E + E + + + + ++ +K K E+ +
Sbjct: 70 DEEKKEESLTERKREQNKKKRKMIS-EIISQEEGSTIQWTSSVEAKIEDKKIKRENKLTS 128
Query: 100 AKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
K E N + E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ P
Sbjct: 129 GKLE-NLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQTP 187
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
TPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 188 TPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 227
>gi|332258725|ref|XP_003278445.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Nomascus
leucogenys]
Length = 598
Score = 112 bits (281), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 77/226 (34%), Positives = 115/226 (50%), Gaps = 42/226 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPE--KAMVSFVK-- 58
L AG FD ++F D ARF+ K +S + F +K+ P A ++ K
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTYQKSQ 69
Query: 59 ----------------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPSK 99
K+KRK++ E + EG + Q + +V+ K+ED +
Sbjct: 70 NEEKNESITERKREQSKKKRKTMTSEIISQEEGATI-----QWISSVEA---KIEDKKVQ 121
Query: 100 AKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
+ +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ +
Sbjct: 122 RESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILD 181
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 AGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 227
>gi|119578003|gb|EAW57599.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_a [Homo
sapiens]
Length = 381
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVE---AKIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|62087456|dbj|BAD92175.1| ATP-dependent RNA helicase ROK1 isoform a variant [Homo sapiens]
Length = 512
Score = 112 bits (279), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 9 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 68
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 69 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVEA---KIEDKKV 120
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 121 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 180
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 181 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 227
>gi|38569505|ref|NP_008941.2| probable ATP-dependent RNA helicase DDX52 [Homo sapiens]
gi|296439375|sp|Q9Y2R4.3|DDX52_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
Length = 599
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVE---AKIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|27697141|gb|AAH41785.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Homo sapiens]
gi|119578004|gb|EAW57600.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_b [Homo
sapiens]
Length = 599
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVE---AKIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|4689114|gb|AAD27766.1|AF077033_1 putative ATP-dependent RNA helicase ROK1 [Homo sapiens]
Length = 598
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 78/227 (34%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVEA---KIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|410980532|ref|XP_003996631.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Felis catus]
Length = 597
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 76/223 (34%), Positives = 111/223 (49%), Gaps = 37/223 (16%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSFVK---- 58
L G FD ++F D ARF+ K +S + F +K+ P + S
Sbjct: 10 LGVGAKFDVRRFSADAARFQVGKRKYDFDSSEVLQGLDFFGNKKSVPGEFGASRTHQELQ 69
Query: 59 ----------------KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKK 102
K+KRK + E + + S Q + +V+ K+ED K +
Sbjct: 70 DEEKKESLTERKREQNKKKRKMMTSEIT---SQEEGSIQWISSVEA---KIEDKKIKREN 123
Query: 103 EL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
+L N + E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G+
Sbjct: 124 KLTSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGF 183
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 184 QMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 226
>gi|432113623|gb|ELK35905.1| Putative ATP-dependent RNA helicase DDX52 [Myotis davidii]
Length = 581
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 73/220 (33%), Positives = 110/220 (50%), Gaps = 29/220 (13%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDVRRFSADAARFQVGKRKYDFDSAEVLQGLDFFGNKKSVPGECGESGTNQELQ 69
Query: 50 ----------EKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSK 99
E+ KKRKR + + E + + + ++ +K K E+ +
Sbjct: 70 DEEEKEESLTERKREQNKKKRKRMTSEITSEEEGSTIQWISSVEAKIEDKKVKKENKLTS 129
Query: 100 AKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
K EL ++ E+ R K+ IH+ G ++P P+ TF +L + S LL+N+ + G++ P
Sbjct: 130 GKLELIRK-EKINFLRNKHKIHIQGTDLPDPIATFQQLEQEYKINSRLLQNILDSGFQTP 188
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
TPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 189 TPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|390363099|ref|XP_003730297.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Strongylocentrotus purpuratus]
Length = 448
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 72/193 (37%), Positives = 100/193 (51%), Gaps = 22/193 (11%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK-KRKRKSIA 66
L AG FD ++F +D +F+ + + + + D KA+ F KR
Sbjct: 11 LGAGAKFDLRRFKSDAEKFQVIRRTGK--------QLPQQDIIKALDIFGNSKRSSDETK 62
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGAN 126
G + + V S K A DKE GP +A E+ V RK+ IHV G +
Sbjct: 63 GNSKKKRKVSVSDKS---ATDKEDNL--KGPGRA--------EKIKVIRKRNRIHVQGED 109
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
+P P+ TF +L +G +++N+ +GY PTPIQ QAIPVLL RE ACAPTGSGK
Sbjct: 110 IPDPVETFEELQEEYGLHDDIIQNIMRVGYAAPTPIQMQAIPVLLHRRELLACAPTGSGK 169
Query: 187 TLAFLCPMLMKLR 199
T AFL P+L +L+
Sbjct: 170 TAAFLLPILHQLK 182
>gi|332847931|ref|XP_001173155.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
troglodytes]
gi|410211834|gb|JAA03136.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410252896|gb|JAA14415.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410307108|gb|JAA32154.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
gi|410349923|gb|JAA41565.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Pan troglodytes]
Length = 599
Score = 110 bits (274), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 77/227 (33%), Positives = 114/227 (50%), Gaps = 43/227 (18%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK + + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEENLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVEA---KIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNVL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|291242221|ref|XP_002741008.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Saccoglossus kowalevskii]
Length = 681
Score = 109 bits (273), Expect = 5e-22, Method: Compositional matrix adjust.
Identities = 49/108 (45%), Positives = 75/108 (69%), Gaps = 6/108 (5%)
Query: 98 SKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNL 151
+K +K++N +QI R+ V FRKK+ IH+SG ++P P+ +F +L + S +L+N+
Sbjct: 125 NKEEKKMNPKKIEQIRREKVNAFRKKHKIHISGTDIPDPIDSFQQLKQEYKINSTILKNV 184
Query: 152 AELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++GY+ PTPIQ Q +P++L RE ACAPTGSGKT AF+ P+L L+
Sbjct: 185 EDVGYQSPTPIQMQTLPLMLHRREVLACAPTGSGKTAAFIIPVLHHLK 232
>gi|296201956|ref|XP_002748362.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Callithrix
jacchus]
Length = 575
Score = 109 bits (272), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 76/224 (33%), Positives = 113/224 (50%), Gaps = 37/224 (16%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP---------EKAM 53
L AG FD ++F D ARF+ K S + + F +K+ P +K
Sbjct: 10 LCAGAKFDVRRFSADAARFQIGKRKYDFNSLEMLQELDFFGNKKSVPGVCGTSQAHQKPQ 69
Query: 54 VSFVKK------------RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAK 101
VKK +KRK++ E V ++ Q + +V+ K+ED + +
Sbjct: 70 NEEVKKESLTERKREQSKKKRKTMTSEITSQDEV--ATIQWMSSVE---AKIEDKKVQRE 124
Query: 102 KELNK------QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELG 155
+L + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G
Sbjct: 125 NKLTSGKLERLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAG 184
Query: 156 YKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 185 FQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFGIPILMQLK 228
>gi|449680655|ref|XP_002168566.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Hydra
magnipapillata]
Length = 585
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 49/101 (48%), Positives = 74/101 (73%), Gaps = 1/101 (0%)
Query: 100 AKKELNKQ-IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+++N+Q IE+ +FRK++ IHV G ++ P+ +F+ L RF + +++N+ E G++
Sbjct: 122 SKEKVNQQHIEKINIFRKEHLIHVYGFDIADPISSFLDLKERFNVPTIIMKNVKENGFEV 181
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE ACAPTGSGKTLAF+ P+L L+
Sbjct: 182 PTPIQMQAIPVILQHREMLACAPTGSGKTLAFILPILCHLK 222
>gi|403274723|ref|XP_003929113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Saimiri
boliviensis boliviensis]
Length = 597
Score = 109 bits (272), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 72/217 (33%), Positives = 108/217 (49%), Gaps = 25/217 (11%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP---------EKAM 53
L AG FD ++F D ARF+ K +S + F +K+ P +K
Sbjct: 10 LGAGAKFDVRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNQKSVPGVCRASQAHQKPQ 69
Query: 54 VSFVKK-----RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNK-- 106
VKK RKR+ + + + + + + K+ED + + +L
Sbjct: 70 NEEVKKESLTERKREQSKKKKMTSEITSQDEVATIQWISSVEAKIEDKKVQRENKLTSGK 129
Query: 107 ----QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
+ E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPI
Sbjct: 130 LEHLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPI 189
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 190 QMQAIPVMLHSRELLASAPTGSGKTLAFSIPILMQLK 226
>gi|281346401|gb|EFB21985.1| hypothetical protein PANDA_014345 [Ailuropoda melanoleuca]
Length = 524
Score = 108 bits (271), Expect = 9e-22, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 32/221 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSFVKK--- 59
L AG FD ++F D ARF+ K +S + F +K+ P + S +
Sbjct: 10 LGAGAKFDVRRFSADAARFQVGKRKHEFDSSEVLQGLDFFGNKKSVPGECGASRTHQELQ 69
Query: 60 ---RKRKSIAGETVEGFNVFK------------SSKQLVPAVDKEKEKVEDGPSKAKKEL 104
+K +S+ E K S+ Q + +V+ K+ED K + +L
Sbjct: 70 DEEKKEESLTERKREQKKKRKMMMSEITSQEEGSTIQWISSVEA---KIEDKKIKRENKL 126
Query: 105 ------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
N + E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 127 TSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQM 186
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM L+
Sbjct: 187 PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLK 227
>gi|301779033|ref|XP_002924934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ailuropoda melanoleuca]
Length = 598
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/221 (34%), Positives = 111/221 (50%), Gaps = 32/221 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSFVKK--- 59
L AG FD ++F D ARF+ K +S + F +K+ P + S +
Sbjct: 10 LGAGAKFDVRRFSADAARFQVGKRKHEFDSSEVLQGLDFFGNKKSVPGECGASRTHQELQ 69
Query: 60 ---RKRKSIAGETVEGFNVFK------------SSKQLVPAVDKEKEKVEDGPSKAKKEL 104
+K +S+ E K S+ Q + +V+ K+ED K + +L
Sbjct: 70 DEEKKEESLTERKREQKKKRKMMMSEITSQEEGSTIQWISSVEA---KIEDKKIKRENKL 126
Query: 105 ------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
N + E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 127 TSGKLENLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQM 186
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM L+
Sbjct: 187 PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLK 227
>gi|334322494|ref|XP_003340257.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Monodelphis domestica]
Length = 608
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 74/227 (32%), Positives = 113/227 (49%), Gaps = 35/227 (15%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSF----VK 58
L AG FD ++F TD ARF+ K +S + +D +F +K+ + + S K
Sbjct: 10 LGAGAKFDLRRFPTDAARFQLGKRKFDFDSSEVLEDLNFFGNKKSTLAENITSLDDTLSK 69
Query: 59 KRKRKSIAGETVEGFNV----------FKSSKQLVPAVDKEKEKVEDGPSKAKKELNK-- 106
+R E E + +SS+ + + KE++ ++ S K NK
Sbjct: 70 GEERLQQKAEHEEDNRIERKRKGNKKKKQSSETISFSPSKEEDTIQWTSSLEAKIKNKKG 129
Query: 107 --------------QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ E+ FR K+ IH+ G ++P P+ +F +L + S LL+N+
Sbjct: 130 NEENKVTAEKLERLRKEKINRFRNKHRIHIQGTDLPEPIASFQQLDQEYKIHSRLLQNIL 189
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 190 NAGFQNPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 236
>gi|426237078|ref|XP_004012488.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Ovis aries]
Length = 598
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 74/222 (33%), Positives = 112/222 (50%), Gaps = 33/222 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEK--AMVSFVKKR 60
L AG FD ++F D ARF+ K +S + F +K+ P A+ + + R
Sbjct: 10 LGAGAKFDLRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGDCGALRTHQELR 69
Query: 61 KRKSIAGETVEGFNVFK-----------------SSKQLVPAVDKEKEKVEDGPSKAKKE 103
+ G +E S+ Q + +V+ K+ED K + +
Sbjct: 70 DEEKKEGGQIERKKEQNRKKKKKMTSEITSEEEVSTIQWISSVEA---KIEDKNVKRENK 126
Query: 104 LN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
L +Q+ ++ + FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 127 LTSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQ 186
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM L+
Sbjct: 187 IPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMHLK 228
>gi|340715568|ref|XP_003396283.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
terrestris]
Length = 582
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 71/192 (36%), Positives = 99/192 (51%), Gaps = 6/192 (3%)
Query: 8 LFAGVSFDKKKFVTDFARFK-ENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIA 66
L GV FDKK+F D RF+ +K+SEN +D K + +KRK +
Sbjct: 10 LSTGVKFDKKRFQVDAERFQLVSKQSENGDNDDKM--NIKAFDNINHSTLCEKRKYDEVE 67
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGAN 126
ET ++ +P +K KV +K L + E+ FR ++I V+G
Sbjct: 68 KETENINDLILLDGMSIPQNKNKKCKV---ALTEEKRLKLEKEKINQFRNHHHISVTGNC 124
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
+P P+ F +LS+ + L+ N+ GYK PTPIQ QAIPV+L R ACAPTGSGK
Sbjct: 125 IPKPISEFDELSTTYNISKKLIHNITNCGYKCPTPIQMQAIPVMLQGRNVLACAPTGSGK 184
Query: 187 TLAFLCPMLMKL 198
T AFL P++ L
Sbjct: 185 TAAFLLPIIHYL 196
>gi|157073998|ref|NP_001096708.1| probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|160380636|sp|A5D7C1.1|DDX52_BOVIN RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=DEAD box protein 52
gi|146186791|gb|AAI40502.1| DDX52 protein [Bos taurus]
gi|296477012|tpg|DAA19127.1| TPA: probable ATP-dependent RNA helicase DDX52 [Bos taurus]
gi|440912331|gb|ELR61911.1| Putative ATP-dependent RNA helicase DDX52 [Bos grunniens mutus]
Length = 596
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 56/128 (43%), Positives = 81/128 (63%), Gaps = 9/128 (7%)
Query: 78 SSKQLVPAVDKEKEKVEDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPL 131
S+ Q + +V+ K+ED K K +L +Q+ ++ + FR K+ IHV G ++P P+
Sbjct: 102 STIQWISSVEA---KIEDKNVKRKNKLTSGKLEQLRKEKLNFFRNKHKIHVQGTDLPDPI 158
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
TF +L + S LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF
Sbjct: 159 ATFQQLDQEYKINSRLLQNILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFS 218
Query: 192 CPMLMKLR 199
P+LM L+
Sbjct: 219 IPILMHLK 226
>gi|349603916|gb|AEP99614.1| putative ATP-dependent RNA helicase DDX52-like protein, partial
[Equus caballus]
Length = 512
Score = 107 bits (268), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 55/128 (42%), Positives = 82/128 (64%), Gaps = 9/128 (7%)
Query: 78 SSKQLVPAVDKEKEKVEDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPL 131
S+ Q + +V+ K+ED K + +L +Q+ ++ + FR K+ IHV G ++P P+
Sbjct: 17 STIQWISSVEA---KIEDKKVKRENKLTSGKLEQLRKEKINFFRNKHKIHVQGTDLPDPI 73
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
TF +L + S LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF
Sbjct: 74 ATFQQLEQEYKINSQLLQNILDAGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFS 133
Query: 192 CPMLMKLR 199
P+LM+L+
Sbjct: 134 IPILMQLK 141
>gi|354497109|ref|XP_003510664.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 1
[Cricetulus griseus]
Length = 599
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 8 LFAGVSFDKKKFVTDFARF-----KENKESENLADDFSFVEGEKT--DPEKAMVSFVKKR 60
L AG FD K+F D ARF K N +S + F +K+ D A+ + + +
Sbjct: 10 LGAGAKFDVKRFSADAARFQVGKRKCNPDSSEVLQGLDFFGNKKSVSDECGALQTHQELQ 69
Query: 61 KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI------------ 108
K + G +EG K K+ + ++ DG + + +I
Sbjct: 70 KEEKTEGGLLEGSKEPKKKKRKKMISEITAQEDFDGTIQWTSSVEAKIQEEKKGKGEKKL 129
Query: 109 ----------ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 130 TSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNILDAGFQV 189
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 190 PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 230
>gi|354497111|ref|XP_003510665.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like isoform 2
[Cricetulus griseus]
Length = 601
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/221 (33%), Positives = 108/221 (48%), Gaps = 29/221 (13%)
Query: 8 LFAGVSFDKKKFVTDFARF-----KENKESENLADDFSFVEGEKT--DPEKAMVSFVKKR 60
L AG FD K+F D ARF K N +S + F +K+ D A+ + + +
Sbjct: 10 LGAGAKFDVKRFSADAARFQVGKRKCNPDSSEVLQGLDFFGNKKSVSDECGALQTHQELQ 69
Query: 61 KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI------------ 108
K + G +EG K K+ + ++ DG + + +I
Sbjct: 70 KEEKTEGGLLEGSKEPKKKKRKKMISEITAQEDFDGTIQWTSSVEAKIQEEKKGKGEKKL 129
Query: 109 ----------ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
E+ FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 130 TSGKLEHLRKEKVNFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISSRLLQNILDAGFQV 189
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 190 PTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 230
>gi|448087199|ref|XP_004196272.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359377694|emb|CCE86077.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 552
Score = 107 bits (267), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 52/120 (43%), Positives = 79/120 (65%), Gaps = 6/120 (5%)
Query: 87 DKEKEKVEDGPSKAKKELNKQI------ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
D + E+ ED P+KA++E + + E FRKK + V+G+++P P+ TF L++R
Sbjct: 63 DNDNEEDEDSPNKAEEEDSNALDMIRSEEEAKSFRKKNKVKVTGSDIPLPVATFNDLTTR 122
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
F + +L NL E G+ EPTP+Q +++P+ LS R+ ACAPTGSGKTLAFL P++ + V
Sbjct: 123 FRFDKKILSNLIESGFTEPTPVQCESMPIALSRRDIIACAPTGSGKTLAFLVPLIQNIIV 182
>gi|350418051|ref|XP_003491710.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Bombus
impatiens]
Length = 563
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 69/192 (35%), Positives = 100/192 (52%), Gaps = 6/192 (3%)
Query: 8 LFAGVSFDKKKFVTDFARFK-ENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIA 66
L GV FD+K+F D RF+ NK+S N +D + +++ +KRK +
Sbjct: 10 LSTGVKFDRKRFQVDAERFQLVNKQSGNGVNDDKINIKSFDNINHSILC--EKRKYDEVE 67
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGAN 126
ET ++ +P +K KV +K L + E+ FR + I V+G
Sbjct: 68 KETENINDLTLLDGMSIPQNKNKKCKV---ALTEEKRLKLEKEKINQFRNHHRISVTGNC 124
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
+P P+ F++LS+ + L+ N+ GYK PTPIQ QAIPV+L R ACAPTGSGK
Sbjct: 125 IPKPISEFIELSTTYNISQKLIYNITNCGYKCPTPIQMQAIPVMLQGRNVLACAPTGSGK 184
Query: 187 TLAFLCPMLMKL 198
T AFL P++ L
Sbjct: 185 TAAFLLPIIHYL 196
>gi|431890891|gb|ELK01770.1| Putative ATP-dependent RNA helicase DDX52 [Pteropus alecto]
Length = 598
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 106/218 (48%), Gaps = 26/218 (11%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDLRRFSADAARFQVGKRKYDFDSSEVPQGLDFFGNKKSVPSECGGSKTHQEIQ 69
Query: 50 --EKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNK- 106
EK S +K++ ++ + + + + + K+ED K + ++
Sbjct: 70 DVEKKEESLTEKKREQNKKRRKMMTSEINSEESSTIQWISSVEAKIEDKKVKRENKVTSG 129
Query: 107 -----QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
+ E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTP
Sbjct: 130 KLEHLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLEQEYKINSQLLQNILDAGFQVPTP 189
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
IQ QAIPV+L RE A APTGSGKTLAF P+L+ L+
Sbjct: 190 IQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILIHLK 227
>gi|297700670|ref|XP_002827359.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Pongo abelii]
Length = 600
Score = 107 bits (266), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 76/222 (34%), Positives = 108/222 (48%), Gaps = 32/222 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKT--------------- 47
L AG FD ++F ARF+ K +S + F +K+
Sbjct: 10 LGAGAKFDTRRFSAKAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVSGVYSGASQTHQKP 69
Query: 48 -DPEKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGP 97
+ EK S + K+KRK++ E EG + S DK+ E+
Sbjct: 70 QNGEKKEESLTERKREQSKKKRKTMTSEITSQEEGATIQWMSSVEAKIEDKKVERESKLT 129
Query: 98 SKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
S + L K E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++
Sbjct: 130 SGKLENLRK--EKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQ 187
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 188 IPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 229
>gi|334322496|ref|XP_001371632.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 1
[Monodelphis domestica]
Length = 604
Score = 106 bits (265), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 74/223 (33%), Positives = 112/223 (50%), Gaps = 31/223 (13%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSF----VK 58
L AG FD ++F TD ARF+ K +S + +D +F +K+ + + S K
Sbjct: 10 LGAGAKFDLRRFPTDAARFQLGKRKFDFDSSEVLEDLNFFGNKKSTLAENITSLDDTLSK 69
Query: 59 KRKRKSIAGETVEGFNV----------FKSSK---------QLVPAVD---KEKEKVEDG 96
+R E E + +SS Q +++ K K+ E+
Sbjct: 70 GEERLQQKAEHEEDNRIERKRKGNKKKKQSSGYPSKEEDTIQWTSSLEAKIKNKKGNEEN 129
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
A+K + E+ FR K+ IH+ G ++P P+ +F +L + S LL+N+ G+
Sbjct: 130 KVTAEKLERLRKEKINRFRNKHRIHIQGTDLPEPIASFQQLDQEYKIHSRLLQNILNAGF 189
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 190 QNPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 232
>gi|340374721|ref|XP_003385886.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Amphimedon queenslandica]
Length = 593
Score = 106 bits (265), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR I+VSG++VP P+RTF LS ++ YL++N+ LGY +PTP+Q Q IP+LL
Sbjct: 147 FRNSNRIYVSGSDVPDPIRTFSDLSEQYSIPPYLMKNITSLGYNDPTPVQMQTIPLLLHS 206
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
E CAPTGSGKT AFL P+L L+
Sbjct: 207 HEVLVCAPTGSGKTAAFLVPILTLLK 232
>gi|395846002|ref|XP_003795705.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Otolemur
garnettii]
Length = 572
Score = 106 bits (264), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 51/114 (44%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 92 KVED----GPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K+ED G +K E + + ++ + FR K+ IH+ G ++P P+ TF +L + S
Sbjct: 115 KIEDKKVKGENKLTSEKLEHLRKEKINFFRNKHKIHIQGTDLPDPITTFQQLDQEYKINS 174
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 175 RLLQNIVDSGFQMPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|66820759|ref|XP_643949.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
gi|74927179|sp|Q86IZ9.1|DDX52_DICDI RecName: Full=Probable ATP-dependent RNA helicase ddx52; AltName:
Full=DEAD box protein 52
gi|60472102|gb|EAL70055.1| hypothetical protein DDB_G0274325 [Dictyostelium discoideum AX4]
Length = 668
Score = 105 bits (263), Expect = 8e-21, Method: Compositional matrix adjust.
Identities = 53/109 (48%), Positives = 68/109 (62%), Gaps = 10/109 (9%)
Query: 90 KEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLR 149
KE ED K K+E+ A FR K+ I V G ++P P+ F +L +RF YLL
Sbjct: 163 KETQED---KHKREI-------ATFRNKHRIKVDGTDIPDPMTEFSQLENRFKVRKYLLN 212
Query: 150 NLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
N+ E+GYKEP+PIQ Q IP+LL +RE A APTGSGKT +F P+L L
Sbjct: 213 NINEIGYKEPSPIQMQVIPILLKEREVVAIAPTGSGKTASFSIPILQAL 261
>gi|256985213|ref|NP_084372.2| probable ATP-dependent RNA helicase DDX52 [Mus musculus]
gi|341940434|sp|Q8K301.2|DDX52_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; AltName:
Full=DEAD box protein 52
gi|74225794|dbj|BAE21716.1| unnamed protein product [Mus musculus]
gi|148683781|gb|EDL15728.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLK 229
>gi|20809366|gb|AAH29094.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Mus musculus]
Length = 598
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLK 229
>gi|74177868|dbj|BAE39019.1| unnamed protein product [Mus musculus]
Length = 595
Score = 105 bits (261), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLK 229
>gi|26348749|dbj|BAC38014.1| unnamed protein product [Mus musculus]
Length = 579
Score = 104 bits (260), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 46/86 (53%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 144 FRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQVPTPIQMQAIPVMLHG 203
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 204 RELLASAPTGSGKTLAFSIPILMQLK 229
>gi|432897373|ref|XP_004076440.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Oryzias
latipes]
Length = 657
Score = 104 bits (259), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/235 (32%), Positives = 114/235 (48%), Gaps = 48/235 (20%)
Query: 8 LFAGVSFDKKKFVTDFARFK--ENKESENLADDFSFVEGEKTDPEKA-MVSFVKKR---- 60
L AG FD K+F D ARFK ++E E L+ S ++ +TDP +SF +
Sbjct: 10 LGAGAKFDLKRFGQDAARFKVTRSREGETLSHALSTIDYFRTDPTSGPQISFQTGQEDED 69
Query: 61 ----------KRKSI---------------------AGETVE-----GFNVFKSSKQLVP 84
KR+ I G+T G + SS + +
Sbjct: 70 GESGESEAGGKRQRIEDDYTKSKKKKTKNKQVSAKDVGKTWNESEGNGIKLTSSSGRKIQ 129
Query: 85 AVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
++ ++EK K K+ ++I R R ++ I+V G++VP P+ TF +L S +
Sbjct: 130 SLQCDEEK--SSLKKLKRLHQEKINR---VRSQHRINVHGSDVPDPVCTFEELQSEYRLN 184
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+L+NL + G PTPIQ QAIP+++ RE ACAPTGSGKTLAF P+L L+
Sbjct: 185 PRVLQNLKDAGLNSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCLPLLTHLQ 239
>gi|345480251|ref|XP_001607535.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Nasonia
vitripennis]
Length = 643
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 46/97 (47%), Positives = 69/97 (71%)
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
K+L + E+ +R K++I V+G++VP P+ +F +LS+ F S +L+N+ GY +PTP
Sbjct: 104 KKLKLEQEKINQYRNKHHISVTGSHVPEPIESFEQLSTEFKIGSDILQNMRTCGYNQPTP 163
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IQ QAIPV+L R+ ACAPTGSGKT +FL P++ +L
Sbjct: 164 IQMQAIPVMLQGRQILACAPTGSGKTASFLLPIIHQL 200
>gi|351696669|gb|EHA99587.1| Putative ATP-dependent RNA helicase DDX52, partial [Heterocephalus
glaber]
Length = 442
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR K+ IH+ G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 5 FRNKHKIHIQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHG 64
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 65 RELLASAPTGSGKTLAFSIPILMQLK 90
>gi|119351037|gb|ABL63414.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K ++K +G K E + + ++ + FR K+ IHV G ++P P+ TF +L +
Sbjct: 116 KLQDKKANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISP 175
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 176 RLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 229
>gi|119351039|gb|ABL63415.1| ATP-dependent RNA helicase [Rattus norvegicus]
Length = 598
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K ++K +G K E + + ++ + FR K+ IHV G ++P P+ TF +L +
Sbjct: 116 KLQDKKANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISP 175
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 176 RLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 229
>gi|16758984|ref|NP_445977.1| probable ATP-dependent RNA helicase DDX52 [Rattus norvegicus]
gi|34582286|sp|Q99PT0.1|DDX52_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX52; AltName:
Full=ATP-dependent RNA helicase ROK1-like; Short=rROK1L;
AltName: Full=DEAD box protein 52
gi|12862376|dbj|BAB32441.1| ROK1-like protein [Rattus norvegicus]
gi|149053684|gb|EDM05501.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 103 bits (258), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 50/114 (43%), Positives = 73/114 (64%), Gaps = 2/114 (1%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K ++K +G K E + + ++ + FR K+ IHV G ++P P+ TF +L +
Sbjct: 116 KLQDKKANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDPIATFQQLDQEYKISP 175
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 176 RLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 229
>gi|395531966|ref|XP_003768044.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Sarcophilus
harrisii]
Length = 618
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 70/230 (30%), Positives = 115/230 (50%), Gaps = 40/230 (17%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSF------ 56
L AG FD ++F TD ARF+ K +S + ++ +F +K P + S
Sbjct: 10 LGAGAKFDLRRFQTDAARFQLGKRKFDFDSSEVLEELNFFGRKKPTPAENEASLDNSLSK 69
Query: 57 VKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL------------ 104
++R ++ + GE E + + K+ + + E + G +K ++ +
Sbjct: 70 EEERLQQKVEGE--EDNRIERKRKRNMKKEKQTPETISVGSNKEEETILWMSSLEAKIKN 127
Query: 105 ----------NKQIER-----DAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLR 149
+++ER R K+ IH+ G ++P P+ +F +L + S LL+
Sbjct: 128 KKGKEENKLTAEKLERLRKQKINCLRNKHKIHIQGTDLPEPITSFQQLDQEYKIHSRLLQ 187
Query: 150 NLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 188 NILDAGFQTPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 237
>gi|196015875|ref|XP_002117793.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
gi|190579678|gb|EDV19769.1| hypothetical protein TRIADDRAFT_33010 [Trichoplax adhaerens]
Length = 369
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 64/87 (73%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+ R + +I V G ++P P+ F +L +G SYLL NLA+ GY++PTP+Q Q+IP++L
Sbjct: 6 LIRHENSIFVHGPDIPDPITNFEELRKTYGARSYLLDNLAKYGYRKPTPVQMQSIPIILG 65
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
+RE ACAPTGSGK+LAF+ P+L+ L+
Sbjct: 66 ERELLACAPTGSGKSLAFILPVLLTLK 92
>gi|443900149|dbj|GAC77476.1| ATP-dependent RNA helicase [Pseudozyma antarctica T-34]
Length = 586
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 71/204 (34%), Positives = 104/204 (50%), Gaps = 16/204 (7%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGET 69
GVSFDKK+F +D F E +A + K KA KK K I +
Sbjct: 10 GGVSFDKKRFESDVKIF--GAPDEPVASGSANKHKRKRSEPKAETQAAKKDAAKVIVPDG 67
Query: 70 VEGFNVFKSSKQLVPAVDKE-KEKVEDGPSKAKKELNKQIERD-------------AVFR 115
++ F +K V AV++E ++ D K + + ++ E + F
Sbjct: 68 LDFFGSAAKAKATVSAVEREERQSKRDAKQKEESDSEEESEESSEEEEEAVTKATLSAFL 127
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
K+ I + G +VP P+ ++ +L SRFG +L NL + G+ PT IQ+ A+PVLL++R+
Sbjct: 128 KRNRIKLKGTDVPLPMASWAELESRFGVAPWLRTNLDKWGWGVPTAIQKGAMPVLLANRD 187
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAFL P+L LR
Sbjct: 188 LLAGAPTGSGKTLAFLLPLLHHLR 211
>gi|119578005|gb|EAW57601.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52, isoform CRA_c [Homo
sapiens]
Length = 491
Score = 103 bits (257), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ
Sbjct: 26 NLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQM 85
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 86 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 120
>gi|156373178|ref|XP_001629410.1| predicted protein [Nematostella vectensis]
gi|156216410|gb|EDO37347.1| predicted protein [Nematostella vectensis]
Length = 471
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 64/100 (64%)
Query: 100 AKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
A K K E+ +FR + +I+V GA+VP P+ TF +L R+G Y++ N+ E GY P
Sbjct: 11 ANKLAEKHQEKINLFRHEQHIYVKGADVPDPVETFSQLIERYGFPDYIIHNVQERGYTTP 70
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
TPIQ QA P++ RE CAPTGSGKT AF+ P+L L+
Sbjct: 71 TPIQMQATPLMAHGREVLCCAPTGSGKTAAFILPILHMLK 110
>gi|402899925|ref|XP_003912934.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Papio anubis]
Length = 599
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 143 LRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHG 202
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 203 RELLASAPTGSGKTLAFSIPILMQLK 228
>gi|380788803|gb|AFE66277.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|383415417|gb|AFH30922.1| putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
Length = 599
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIP
Sbjct: 138 EKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIP 197
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
V+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 198 VMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|355568613|gb|EHH24894.1| Putative ATP-dependent RNA helicase DDX52 [Macaca mulatta]
gi|355754079|gb|EHH58044.1| Putative ATP-dependent RNA helicase DDX52 [Macaca fascicularis]
Length = 599
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIP
Sbjct: 138 EKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIP 197
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
V+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 198 VMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|109114658|ref|XP_001112113.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Macaca
mulatta]
Length = 599
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 46/91 (50%), Positives = 62/91 (68%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIP
Sbjct: 138 EKINCLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIP 197
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
V+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 198 VMLHGRELLASAPTGSGKTLAFSIPILMQLK 228
>gi|444720987|gb|ELW61747.1| Synergin gamma [Tupaia chinensis]
Length = 2242
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 196 IRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHG 255
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 256 RELLASAPTGSGKTLAFSIPILMQLK 281
>gi|7023040|dbj|BAA91812.1| unnamed protein product [Homo sapiens]
Length = 491
Score = 103 bits (256), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ
Sbjct: 26 NLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQM 85
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 86 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 120
>gi|395748896|ref|XP_003778849.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2
[Pongo abelii]
Length = 491
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ
Sbjct: 26 NLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQIPTPIQM 85
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 86 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 120
>gi|397494238|ref|XP_003817991.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 isoform 2 [Pan
paniscus]
gi|410051505|ref|XP_003953105.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Pan
troglodytes]
Length = 491
Score = 103 bits (256), Expect = 6e-20, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 64/95 (67%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ
Sbjct: 26 NLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNVLDAGFQMPTPIQM 85
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 86 QAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 120
>gi|328773151|gb|EGF83188.1| hypothetical protein BATDEDRAFT_29188 [Batrachochytrium
dendrobatidis JAM81]
Length = 472
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 60/86 (69%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RKK I VSG ++P P ++F L RF SYL RNL + Y +PT +Q QAIP++L +
Sbjct: 6 WRKKNKIKVSGTDIPFPFQSFTDLCDRFKLRSYLRRNLLDSDYLKPTSVQMQAIPIMLHN 65
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE ACAPTGSGKTLAFL P+L L+
Sbjct: 66 REVMACAPTGSGKTLAFLLPILHDLK 91
>gi|196049877|pdb|3DKP|A Chain A, Human Dead-Box Rna-Helicase Ddx52, Conserved Domain I In
Complex With Adp
Length = 245
Score = 102 bits (255), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 60/86 (69%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K+ IHV G ++P P+ TF +L + S LL+N+ + G++ PTPIQ QAIPV+L
Sbjct: 7 LRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNILDAGFQMPTPIQMQAIPVMLHG 66
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 67 RELLASAPTGSGKTLAFSIPILMQLK 92
>gi|302843242|ref|XP_002953163.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
gi|300261550|gb|EFJ45762.1| hypothetical protein VOLCADRAFT_118300 [Volvox carteri f.
nagariensis]
Length = 602
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 48/95 (50%), Positives = 62/95 (65%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N E + RK I V+G +VP+PL++F +L++R+ L+ +L G+ PTPIQR
Sbjct: 214 NDPYEEANLIRKALRIKVTGTDVPAPLKSFAELAARYRVSRRLVTSLLSSGFTSPTPIQR 273
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIP LL RE A APTGSGKTLAFL P+L LR
Sbjct: 274 QAIPALLGGRELLAVAPTGSGKTLAFLVPILAGLR 308
>gi|358058184|dbj|GAA95976.1| hypothetical protein E5Q_02634 [Mixia osmundae IAM 14324]
Length = 498
Score = 102 bits (253), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 47/86 (54%), Positives = 62/86 (72%), Gaps = 2/86 (2%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A RK++ I ++G +VP PL +F +L + +GCE LL LA +G+ PTPIQ QA+P+LL
Sbjct: 68 AAIRKRHKIRMTGEDVPDPLSSFAELVTLYGCEDSLLDCLATMGHALPTPIQAQALPLLL 127
Query: 172 SD--RECFACAPTGSGKTLAFLCPML 195
D R+ ACAPTGSGKTLAFL P+L
Sbjct: 128 KDHTRDLVACAPTGSGKTLAFLIPLL 153
>gi|323309141|gb|EGA62368.1| Rok1p [Saccharomyces cerevisiae FostersO]
Length = 496
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 25/175 (14%)
Query: 36 ADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV-- 93
A D+S + G+ + K + + V+ + F++ K+++ V+ ++EK
Sbjct: 23 AADYSVINGKD-----------ENHKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTE 70
Query: 94 EDGPSKAKKELN----------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
D P+K +K N +E A RK Y +VSG ++P P+ +F L SRF
Sbjct: 71 NDSPNKEEKSGNDDGLIKPVITNTVEASA-LRKSYKGNVSGIDIPLPIGSFEDLISRFSF 129
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LL NL E G+ EPTPIQ + IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 130 DRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 184
>gi|6321267|ref|NP_011344.1| RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|1173121|sp|P45818.1|ROK1_YEAST RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|607182|emb|CAA84384.1| ATP-dependent RNA helicase [Saccharomyces cerevisiae]
gi|971382|emb|CAA59758.1| putative ATP dependent RNA helicase [Saccharomyces cerevisiae]
gi|1322774|emb|CAA96883.1| ROK1 [Saccharomyces cerevisiae]
gi|285812042|tpg|DAA07942.1| TPA: RNA-dependent ATPase ROK1 [Saccharomyces cerevisiae S288c]
gi|392299579|gb|EIW10673.1| Rok1p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 564
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 95/175 (54%), Gaps = 25/175 (14%)
Query: 36 ADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV-- 93
A D+S + G + K + + V+ + F++ K+++ V+ ++EK
Sbjct: 23 AADYSVINGNDEN-----------HKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTE 70
Query: 94 EDGPSKAKKELN----------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
D P+K +K N +E A RK Y +VSG ++P P+ +F L SRF
Sbjct: 71 NDSPNKEEKSGNDDGLIKPVITNTVEASA-LRKSYKGNVSGIDIPLPIGSFEDLISRFSF 129
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LL NL E G+ EPTPIQ + IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 130 DKRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 184
>gi|349578061|dbj|GAA23227.1| K7_Rok1p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 564
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 25/175 (14%)
Query: 36 ADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV-- 93
A D+S + G+ + K + + V+ + F++ K+++ V+ ++EK
Sbjct: 23 AADYSVINGKDEN-----------HKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTE 70
Query: 94 EDGPSKAKKELN----------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
D P+K +K N +E A RK Y +VSG ++P P+ +F L SRF
Sbjct: 71 NDSPNKEEKSGNDDGLIKPVITNTVEASA-LRKSYKGNVSGIDIPLPIGSFEDLISRFSF 129
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LL NL E G+ EPTPIQ + IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 130 DRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 184
>gi|160358657|sp|A6ZU15.1|ROK1_YEAS7 RecName: Full=ATP-dependent RNA helicase ROK1; AltName:
Full=Rescuer of KEM1 protein 1
gi|151943643|gb|EDN61953.1| conserved protein [Saccharomyces cerevisiae YJM789]
gi|190407114|gb|EDV10381.1| ATP-dependent RNA helicase ROK1 [Saccharomyces cerevisiae RM11-1a]
gi|256272243|gb|EEU07234.1| Rok1p [Saccharomyces cerevisiae JAY291]
gi|259146339|emb|CAY79596.1| Rok1p [Saccharomyces cerevisiae EC1118]
gi|323348686|gb|EGA82928.1| Rok1p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765777|gb|EHN07283.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 564
Score = 101 bits (252), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 25/175 (14%)
Query: 36 ADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV-- 93
A D+S + G+ + K + + V+ + F++ K+++ V+ ++EK
Sbjct: 23 AADYSVINGKDEN-----------HKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTE 70
Query: 94 EDGPSKAKKELN----------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
D P+K +K N +E A RK Y +VSG ++P P+ +F L SRF
Sbjct: 71 NDSPNKEEKSGNDDGLIKPVITNTVEASA-LRKSYKGNVSGIDIPLPIGSFEDLISRFSF 129
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LL NL E G+ EPTPIQ + IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 130 DRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 184
>gi|207345474|gb|EDZ72288.1| YGL171Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 185
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 62/175 (35%), Positives = 96/175 (54%), Gaps = 25/175 (14%)
Query: 36 ADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKV-- 93
A D+S + G+ + K + + V+ + F++ K+++ V+ ++EK
Sbjct: 12 AADYSVINGKD-----------ENHKEDNNESQIVKELDFFRN-KRIISKVEDDREKTTE 59
Query: 94 EDGPSKAKKELN----------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
D P+K +K N +E A RK Y +VSG ++P P+ +F L SRF
Sbjct: 60 NDSPNKEEKSGNDDGLIKPVITNTVEASA-LRKSYKGNVSGIDIPLPIGSFEDLISRFSF 118
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LL NL E G+ EPTPIQ + IPV L++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 119 DRRLLNNLIENGFTEPTPIQCECIPVALNNRDVLACGPTGSGKTLAFLIPLVQQI 173
>gi|345330125|ref|XP_003431468.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Ornithorhynchus anatinus]
Length = 840
Score = 101 bits (251), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 57/147 (38%), Positives = 82/147 (55%), Gaps = 5/147 (3%)
Query: 57 VKKRKRKSIAGE----TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA 112
KKRK + +G + E N L K +EK E+ P+ K E ++ E+
Sbjct: 319 AKKRKIQGASGNALLGSAEDGNSILWMSSLEANRTKNQEKEENKPTAEKLERLRK-EKVN 377
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
R K+ IH+ G ++P P+ F +L + LL+N+ G++ PTPIQ QAIP++L
Sbjct: 378 RLRSKHKIHIQGTDLPEPISAFDQLDQEYKINQRLLQNIVAAGFESPTPIQMQAIPIMLH 437
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
RE A APTGSGKTLAF P+LM+L+
Sbjct: 438 GRELLASAPTGSGKTLAFSIPILMQLK 464
>gi|56972628|gb|AAH88581.1| ddx52-prov protein, partial [Xenopus (Silurana) tropicalis]
Length = 585
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 92 KVEDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K++DG K+K++L KQ+ + + FR ++ I+V G ++P P+ TF +L + S
Sbjct: 121 KLKDGKEKSKRKLTVDKMKQLRLEKINHFRNEHKIYVQGTDIPEPVATFQQLEQEYKTHS 180
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+++N+ + G+ PTPIQ QAIP++L RE A APTGSGKT+AF P+L L+
Sbjct: 181 KIIQNVKDFGFHTPTPIQMQAIPIMLHGREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|330790576|ref|XP_003283372.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
gi|325086637|gb|EGC40023.1| hypothetical protein DICPUDRAFT_6001 [Dictyostelium purpureum]
Length = 462
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 50/103 (48%), Positives = 68/103 (66%), Gaps = 1/103 (0%)
Query: 98 SKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLS-SRFGCESYLLRNLAELGY 156
+K KK + KQ + + FR+ I V G +VP P+++F L S+F YL++N+ E GY
Sbjct: 12 TKQKKLIEKQKRQISEFRRMNRIKVEGTDVPDPIKSFEDLDDSKFKVRKYLIKNIQENGY 71
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
KEP+PIQ Q IP+LL +R+ A APTGSGKT AF P+L LR
Sbjct: 72 KEPSPIQMQTIPILLKERDVVAIAPTGSGKTAAFSIPILSALR 114
>gi|401842122|gb|EJT44393.1| ROK1-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 558
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
+ RK Y +VSG++VP P+ +F L SRF + LL NL E G+ EPTPIQ + IPV L
Sbjct: 99 SALRKSYKGNVSGSDVPLPIGSFEDLISRFSFDKRLLNNLVENGFTEPTPIQNECIPVAL 158
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 159 NNRDILACGPTGSGKTLAFLIPLVQQI 185
>gi|113197619|gb|AAI21228.1| ddx52 protein [Xenopus (Silurana) tropicalis]
Length = 595
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 74/114 (64%), Gaps = 6/114 (5%)
Query: 92 KVEDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K++DG K+K++L KQ+ + + FR ++ I+V G ++P P+ TF +L + S
Sbjct: 121 KLKDGKEKSKRKLTVDKMKQLRLEKINHFRNEHKIYVQGTDIPEPVATFQQLEQEYKTHS 180
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+++N+ + G+ PTPIQ QAIP++L RE A APTGSGKT+AF P+L L+
Sbjct: 181 KIIQNVKDFGFHTPTPIQMQAIPIMLHGREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|321466548|gb|EFX77543.1| hypothetical protein DAPPUDRAFT_321368 [Daphnia pulex]
Length = 581
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 42/81 (51%), Positives = 60/81 (74%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
RK + IHV G+++P+P+ TF +L+ +F + L++N+ GY+ PTPIQ QAIP++L R
Sbjct: 115 RKAHKIHVQGSDIPTPVETFEELAQQFSIKEELIKNIQTRGYEVPTPIQMQAIPLMLKKR 174
Query: 175 ECFACAPTGSGKTLAFLCPML 195
E ACAPTGSGKT AFL P++
Sbjct: 175 EILACAPTGSGKTAAFLVPII 195
>gi|58177858|gb|AAH89107.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Rattus norvegicus]
Length = 598
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 72/114 (63%), Gaps = 2/114 (1%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K ++K +G K E + + ++ + FR K+ IHV G ++P + TF +L +
Sbjct: 116 KLQDKKANGEKKLTSEKLEHLRKEKINFFRNKHKIHVQGTDLPDSIATFQQLDQEYKISP 175
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL+N+ + G++ PTPIQ QAIPV+L RE A APTGSGKTLAF P+LM+L+
Sbjct: 176 RLLQNILDAGFQVPTPIQMQAIPVMLHGRELLASAPTGSGKTLAFSIPILMQLK 229
>gi|320166583|gb|EFW43482.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 534
Score = 100 bits (250), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 49/114 (42%), Positives = 71/114 (62%), Gaps = 3/114 (2%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY- 146
+++E +D ++ ++E+N+ + AVFRK+ IH+ GA P P+RTF + R +
Sbjct: 192 EQQEAQDDAEAERRREINRHQQEVAVFRKQLGIHIHGAEAPEPMRTFDATNPRTNKPYFS 251
Query: 147 --LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ RN+A LG+ EPTPIQ Q +PVLL E A APTGSGKT AF P++ L
Sbjct: 252 KTVQRNVAALGFTEPTPIQMQTMPVLLQRTELLAHAPTGSGKTAAFALPIIEAL 305
>gi|365760811|gb|EHN02500.1| Rok1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 558
Score = 100 bits (249), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 61/87 (70%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
+ RK Y +VSG++VP P+ +F L SRF + LL NL E G+ EPTPIQ + IPV L
Sbjct: 99 SALRKSYKGNVSGSDVPLPIGSFEDLISRFSFDKRLLNNLVENGFTEPTPIQSECIPVAL 158
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
++R+ AC PTGSGKTLAFL P++ ++
Sbjct: 159 NNRDILACGPTGSGKTLAFLIPLVQQI 185
>gi|195440590|ref|XP_002068123.1| GK12420 [Drosophila willistoni]
gi|194164208|gb|EDW79109.1| GK12420 [Drosophila willistoni]
Length = 541
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 67/186 (36%), Positives = 100/186 (53%), Gaps = 5/186 (2%)
Query: 14 FDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGF 73
FD K +T ARF + +++ N + S EK+ +A K+ +KS T E F
Sbjct: 4 FDIFKLITAGARFTKKRKAPNKPNACS----EKSTTLEAETQPQVKKAKKSDESTTSE-F 58
Query: 74 NVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRT 133
+ + Q + ++ +K + +KE +Q R RK +NI V G ++P P+
Sbjct: 59 RLLADNSQNSQSKAQKNKKKAKELTPEEKERLQQEARVNELRKNHNISVLGKDIPPPINN 118
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
F +L F L +NL G+++PTPIQ QA+PV+L +R ACAPTGSGKTLAFL P
Sbjct: 119 FDELQQEFQLLPRLHQNLQSYGFQQPTPIQMQALPVMLRNRALMACAPTGSGKTLAFLTP 178
Query: 194 MLMKLR 199
++ LR
Sbjct: 179 IINGLR 184
>gi|406607780|emb|CCH40885.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 559
Score = 100 bits (249), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 42/86 (48%), Positives = 61/86 (70%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+ RK Y +V+G ++P P+ +F L SRF + LL NL + G+ EPTPIQ +++P+ L
Sbjct: 91 LLRKSYRANVTGNDIPLPIGSFEDLISRFKLDQQLLTNLIDSGFTEPTPIQSESLPITLF 150
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
DR+ ACAPTGSGKTLAF+ P++ +L
Sbjct: 151 DRDVLACAPTGSGKTLAFIIPLIQQL 176
>gi|367000868|ref|XP_003685169.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
gi|357523467|emb|CCE62735.1| hypothetical protein TPHA_0D00940 [Tetrapisispora phaffii CBS 4417]
Length = 570
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 66/174 (37%), Positives = 95/174 (54%), Gaps = 26/174 (14%)
Query: 38 DFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEK-EKVEDG 96
D+S V+ E+T K R+ +I E + F++ K+++ V+KEK E +D
Sbjct: 26 DYSMVKNEQT--------MDKSREEHTINRE----LDFFRN-KRIINKVEKEKLENSKDA 72
Query: 97 PSKAKK-----ELN-------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
KK ELN E RK Y +++G++VP P+ +F L SRF +
Sbjct: 73 DEDEKKVVTETELNFDETLKITTKEEALALRKSYKGNITGSDVPLPIGSFEDLISRFSFD 132
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LLRNL E + EPTP+Q + IP+ L R+ ACAPTGSGKTLAFL P+L ++
Sbjct: 133 KRLLRNLLENHFTEPTPVQSECIPLALHTRDMLACAPTGSGKTLAFLIPLLQQV 186
>gi|50306033|ref|XP_452978.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660546|sp|Q6CSW1.1|ROK1_KLULA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49642111|emb|CAH01829.1| KLLA0C17424p [Kluyveromyces lactis]
Length = 579
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/90 (52%), Positives = 64/90 (71%), Gaps = 1/90 (1%)
Query: 110 RDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
+DA+ RK Y +VSG +VP P+ +F L +RF + LL NL E + EPTPIQ ++IP
Sbjct: 106 QDALKLRKSYQGNVSGNSVPLPIGSFEDLITRFQFDKRLLNNLIENNFTEPTPIQSESIP 165
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+LL +R+ ACAPTGSGKTLAFL P+L ++
Sbjct: 166 ILLHERDMIACAPTGSGKTLAFLIPLLQQI 195
>gi|50291793|ref|XP_448329.1| hypothetical protein [Candida glabrata CBS 138]
gi|74661150|sp|Q6FN65.1|ROK1_CANGA RecName: Full=ATP-dependent RNA helicase ROK1
gi|49527641|emb|CAG61290.1| unnamed protein product [Candida glabrata]
Length = 565
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 53/136 (38%), Positives = 79/136 (58%), Gaps = 13/136 (9%)
Query: 76 FKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI-------------ERDAVFRKKYNIHV 122
F +K++V V+ K K+ED + ++ N E+ + RK Y ++
Sbjct: 51 FFRNKKIVSKVETAKAKLEDSVEDSHQQDNNDDVTEVAYDVKITTKEQASALRKSYKGNI 110
Query: 123 SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
+G ++P P+ +F L SRF + LL NL E + EPTPIQ +AIP+ L+ R+ ACAPT
Sbjct: 111 TGEDIPLPIGSFEDLISRFSLDKRLLNNLIENHFTEPTPIQCEAIPLCLNGRDLLACAPT 170
Query: 183 GSGKTLAFLCPMLMKL 198
GSGKTLAFL P+L ++
Sbjct: 171 GSGKTLAFLIPLLQQI 186
>gi|91084021|ref|XP_975350.1| PREDICTED: similar to pre-mRNA-splicing ATP-dependent RNA helicase
PRP28 [Tribolium castaneum]
gi|270008001|gb|EFA04449.1| hypothetical protein TcasGA2_TC014753 [Tribolium castaneum]
Length = 762
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 76/115 (66%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE++++ D ++K++++ ERD +FR+ YNI + G +P P+R++ G +
Sbjct: 291 KEEKQLWDDRHWSEKDVSEMTERDWRIFREDYNITIKGGKIPEPIRSW----KESGIQKE 346
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
LL + ++GYKEPTPIQRQAIP+ + +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 347 LLEIIDKVGYKEPTPIQRQAIPIGMQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 401
>gi|448082648|ref|XP_004195179.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
gi|359376601|emb|CCE87183.1| Piso0_005726 [Millerozyma farinosa CBS 7064]
Length = 555
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 63/87 (72%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FRKK + V+G+++P P+ TF L++RF + +L NL E G+ EPTP+Q +++P+ LS
Sbjct: 99 FRKKNKVKVTGSDIPLPVATFNDLTTRFRFDKKVLSNLIESGFTEPTPVQCESMPIALSR 158
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV 200
R+ ACAPTGSGKTLAFL P++ + V
Sbjct: 159 RDTIACAPTGSGKTLAFLVPLIQNIIV 185
>gi|380019489|ref|XP_003693637.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis florea]
Length = 512
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 45/98 (45%), Positives = 63/98 (64%)
Query: 101 KKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
+K+L E+ R Y+I+V+G +P P+ F +LS+ +G L+ N+ GY+ PT
Sbjct: 45 EKQLKLAQEKINQHRNHYHINVTGNRIPKPILEFTELSTDYGISEKLINNIINCGYQYPT 104
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PIQ QAIPV+L R+ ACAPTGSGKT AFL P++ L
Sbjct: 105 PIQMQAIPVMLQGRQILACAPTGSGKTAAFLLPIIHHL 142
>gi|328789292|ref|XP_001120427.2| PREDICTED: probable ATP-dependent RNA helicase DDX52-like, partial
[Apis mellifera]
Length = 512
Score = 99.4 bits (246), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 49/117 (41%), Positives = 71/117 (60%), Gaps = 4/117 (3%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQI----ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRF 141
+D E+ + ++ SK KQ+ E+ R +Y+I V+G +P P+ F++LS +
Sbjct: 23 IDAERFQNQNKKSKMSLTEEKQLKLAQEKINQHRNQYHISVTGNRIPKPILEFIELSKDY 82
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G L+ N+ GY+ PTPIQ QAIPV+L R+ ACAPTGSGKT AFL P++ L
Sbjct: 83 GIPKKLINNVINCGYQYPTPIQMQAIPVMLQGRQILACAPTGSGKTAAFLLPIIHHL 139
>gi|322780454|gb|EFZ09942.1| hypothetical protein SINV_14078 [Solenopsis invicta]
Length = 377
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 102/197 (51%), Gaps = 15/197 (7%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAG 67
L GV FD K+F D RF+ + S+N D S VE K + + KRK K A
Sbjct: 10 LAVGVKFDTKRFRQDAERFQMVRPSKN--DISSTVEKIKDEVLEPNTKNSAKRKCKEEAE 67
Query: 68 ET-----VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV 122
+ ++G +V K PA K+ +KV + A K L + E+ R I V
Sbjct: 68 DVDEITLLDGLSVPKDGS--APA--KKHKKV----ATADKMLKLEQEKINHLRNMNRISV 119
Query: 123 SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
+G++VP + F +L + + LL N+ GY PTPIQ QA+P++L R+ ACAPT
Sbjct: 120 TGSHVPKLMLEFNELKTNYQVSENLLDNMKNSGYMYPTPIQMQAMPIMLEGRQILACAPT 179
Query: 183 GSGKTLAFLCPMLMKLR 199
GSGKT AFL P++ LR
Sbjct: 180 GSGKTAAFLLPIIHSLR 196
>gi|443693266|gb|ELT94682.1| hypothetical protein CAPTEDRAFT_187719 [Capitella teleta]
Length = 604
Score = 99.0 bits (245), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 61/95 (64%)
Query: 106 KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
K E ++KK+ IH GA+VP P+ TF +L+ +G ++ N+ G + PTPIQ Q
Sbjct: 115 KHEEEINAYKKKHRIHAIGADVPDPVVTFHQLNGDYGLNQTIIDNMKGCGLETPTPIQMQ 174
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
AIPV++ RE ACAPTGSGKT AFL P+L L+
Sbjct: 175 AIPVMMERREILACAPTGSGKTAAFLLPVLCHLKT 209
>gi|113195544|ref|NP_001037780.1| probable ATP-dependent RNA helicase DDX52 [Danio rerio]
gi|109150086|gb|AAI17611.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Danio rerio]
gi|182892172|gb|AAI65190.1| Ddx52 protein [Danio rerio]
Length = 606
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 39/226 (17%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-ESENLADDFSFVE--GEKTDPEKAMVSFV------- 57
L +G FD K+F D RFK K +S++ +D S + G +T + ++ S
Sbjct: 10 LGSGAKFDLKRFAKDAERFKVGKSQSKDSSDQLSGISYFGRETQEDTSLDSRPNEDDAEE 69
Query: 58 -----KKRKRKSIAG-----------------ETVEGFNVFKSSKQLVPAVDKEKEKVED 95
+K+ +S+ ET EG + Q + +K KE ++
Sbjct: 70 ASDEEQKQATESLKAARKKKKGAKRKSEDAEPETREGEGI-----QWMSLQNKTKEAKQE 124
Query: 96 GPSKAKKELNKQIERDAVFRKKYN--IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
K + KQ+ + V R ++ I+V G ++P P+ TF +L + + ++ N+
Sbjct: 125 SKDKPSLKRLKQLHNEKVNRIRHQNRINVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKA 184
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G++ PTPIQ QA+P+++ RE ACAPTGSGKT+AF P+L LR
Sbjct: 185 AGFQTPTPIQMQAVPLMMHKREILACAPTGSGKTMAFCLPLLAHLR 230
>gi|427799015|gb|JAA64959.1| Putative atp-dependent rna helicase, partial [Rhipicephalus
pulchellus]
Length = 237
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
KK I G +VP+ L TF +L++R+ LLRN+ +LGY+ PTP+QRQAIP +L RE
Sbjct: 77 KKQRIRAKGTDVPALLETFEELATRYKISRVLLRNVKDLGYEAPTPVQRQAIPAMLERRE 136
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKT AFL P++ +L+
Sbjct: 137 LLCCAPTGSGKTAAFLIPIIAQLQ 160
>gi|260823718|ref|XP_002606227.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
gi|229291567|gb|EEN62237.1| hypothetical protein BRAFLDRAFT_287109 [Branchiostoma floridae]
Length = 564
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 53/123 (43%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 80 KQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLS 138
K+L +E ++ D +K L + IERD +FR+ Y+I G +P+PLRT+ + S
Sbjct: 151 KRLNKVKQRELKQKWDDRHWTQKSLEEMIERDWRIFREDYSITTKGGRIPNPLRTWKEAS 210
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+S + +LGYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ +
Sbjct: 211 LTDEIDSII----KDLGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLIWI 266
Query: 199 RVL 201
L
Sbjct: 267 ESL 269
>gi|81294184|gb|AAI08030.1| Ddx52 protein [Danio rerio]
Length = 588
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 68/226 (30%), Positives = 111/226 (49%), Gaps = 39/226 (17%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-ESENLADDFSFVE--GEKTDPEKAMVSFV------- 57
L +G FD K+F D RFK K +S++ +D S + G +T + ++ S
Sbjct: 10 LGSGAKFDLKRFAKDAERFKVGKSQSKDSSDQLSGISYFGRETQEDTSLDSRPNEDDAEE 69
Query: 58 -----KKRKRKSIAG-----------------ETVEGFNVFKSSKQLVPAVDKEKEKVED 95
+K+ +S+ ET EG + Q + +K KE ++
Sbjct: 70 ASDEEQKQATESLKAARKKKKGAKRKSEDAEPETREGEGI-----QWMSLQNKTKEAKQE 124
Query: 96 GPSKAKKELNKQIERDAVFRKKYN--IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
K + KQ+ + V R ++ I+V G ++P P+ TF +L + + ++ N+
Sbjct: 125 SKDKPSLKRLKQLHNEKVNRIRHQNRINVHGTDIPDPVTTFEELQKEYDLDPRIIHNIKA 184
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G++ PTPIQ QA+P+++ RE ACAPTGSGKT+AF P+L LR
Sbjct: 185 AGFQTPTPIQMQAVPLMMHKREILACAPTGSGKTMAFCLPLLAHLR 230
>gi|427781675|gb|JAA56289.1| Putative atp-dependent rna helicase [Rhipicephalus pulchellus]
Length = 533
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 59/84 (70%)
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
KK I G +VP+ L TF +L++R+ LLRN+ +LGY+ PTP+QRQAIP +L RE
Sbjct: 77 KKQRIRAKGTDVPALLETFEELATRYKISRVLLRNVKDLGYEAPTPVQRQAIPAMLERRE 136
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKT AFL P++ +L+
Sbjct: 137 LLCCAPTGSGKTAAFLIPIIAQLQ 160
>gi|346466927|gb|AEO33308.1| hypothetical protein [Amblyomma maculatum]
Length = 586
Score = 97.8 bits (242), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/115 (44%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D + K L + ERD +FR+ ++I + G +P+PLR + S G S
Sbjct: 113 KEEKQKWDDRHWSHKSLEEMQERDWRIFREDFSITIKGGRIPNPLRKW----SESGLPSS 168
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ELGYK+PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 169 ILDIIKELGYKDPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLLPLLVWITSL 223
>gi|158297447|ref|XP_317676.4| AGAP007825-PA [Anopheles gambiae str. PEST]
gi|157015199|gb|EAA12654.5| AGAP007825-PA [Anopheles gambiae str. PEST]
Length = 670
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 72/103 (69%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++KE+++ ERD +FR+ YNI + G +P+P+R++ L S F E +L + ++GYK+
Sbjct: 364 SEKEVDEMTERDWRIFREDYNITIKGGKIPNPIRSW--LESGFPKE--ILEIIDKVGYKD 419
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 420 PTPIQRQAIPIGLQNRDIIGIAETGSGKTLAFLIPLLTWIQSL 462
>gi|385305034|gb|EIF49032.1| atp-dependent rna helicase rok1 [Dekkera bruxellensis AWRI1499]
Length = 574
Score = 97.8 bits (242), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 60/93 (64%), Gaps = 1/93 (1%)
Query: 107 QIERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
Q E DA RKKY I SG ++P P+ +F L +RF LL NL + G+ EPTPIQ +
Sbjct: 85 QTEEDASKLRKKYGIKTSGEDLPLPIGSFEDLVTRFKLNRTLLDNLLKEGFTEPTPIQCE 144
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
AIP + DR+ CAPTGSGKTLAFL P++ L
Sbjct: 145 AIPAAMYDRDIIGCAPTGSGKTLAFLIPLVQSL 177
>gi|405975314|gb|EKC39888.1| Putative ATP-dependent RNA helicase DDX52 [Crassostrea gigas]
Length = 563
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 72/112 (64%), Gaps = 2/112 (1%)
Query: 90 KEKVEDGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
K+K E +K K+ Q++++ + R K IH G + P+P +F +L++ +G +
Sbjct: 85 KKKGEKQRTKKSKQSFAQMKQEKINHIRNKNRIHCFGQDPPNPCTSFEQLAATYGLNPQI 144
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++N+A +GY +PTPIQ QAIP ++ RE ACAPTGSGKT AFL P++ L+
Sbjct: 145 IKNIASIGYTQPTPIQIQAIPAMMDRREILACAPTGSGKTAAFLLPIMHHLK 196
>gi|195128419|ref|XP_002008661.1| GI13618 [Drosophila mojavensis]
gi|193920270|gb|EDW19137.1| GI13618 [Drosophila mojavensis]
Length = 595
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 55/116 (47%), Positives = 73/116 (62%), Gaps = 10/116 (8%)
Query: 94 EDGPS--KAKKELNKQ-------IERDAVFRKKYNIHVSGANVPSPLRTFVKL-SSRFGC 143
E+ P KAKK+L+K+ +E RK+ I V G +VP+P++ F L +S +
Sbjct: 74 ENAPKRKKAKKQLSKEQAEQLQRVEEINALRKQNLITVLGKDVPAPIKLFDDLRTSEYKL 133
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL NL+ G+ +PTPIQ QA+PVLL DR ACAPTGSGKTLAFL P++ LR
Sbjct: 134 LPRLLENLSSYGFAQPTPIQMQALPVLLKDRALMACAPTGSGKTLAFLTPIINGLR 189
>gi|430812294|emb|CCJ30234.1| unnamed protein product [Pneumocystis jirovecii]
Length = 224
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 43/86 (50%), Positives = 61/86 (70%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F++ + I VSG +VP P+ TF +S + S+LL+NL + G+K PTP+Q QAIP+ +
Sbjct: 71 FQRLFRIRVSGDDVPDPIMTFSAMSKQLQFPSFLLKNLEKYGFKTPTPVQIQAIPISAAG 130
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ F C+PTGSGKTLAF+ PML L+
Sbjct: 131 RDLFVCSPTGSGKTLAFIIPMLADLK 156
>gi|47227152|emb|CAG00514.1| unnamed protein product [Tetraodon nigroviridis]
Length = 649
Score = 97.4 bits (241), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 73/232 (31%), Positives = 106/232 (45%), Gaps = 40/232 (17%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDF-----SFVEG----------------EK 46
L AG FD K+F D ARFK N + D F G E+
Sbjct: 10 LGAGAKFDFKRFAQDAARFKVRSHGVNPSTDHLSAIDYFSSGPTNGAQISSNAENDRLEE 69
Query: 47 TDPEKAMVSFVKKRKRKSIAGE-------------TVEGFNVFKSSKQLVPAVDKEKEKV 93
+ E A KRK K + + V+G K S + KV
Sbjct: 70 CEMESADSGVKGKRKLKHVKRDGKINKKKSKRDQMDVDGDCNSKDSNADITWTSLLDRKV 129
Query: 94 EDGPSKAKKELN----KQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
+ K+ L+ K + ++ V R ++ I+V G+++P P+ TF +L S + + +
Sbjct: 130 HSLAADEKETLSLKRLKHLHQEKVNRIRSQHRINVHGSDIPDPVCTFDELQSEYHLNARI 189
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
L+NL + G PTPIQ QA+P+++ RE ACAPTGSGKTLAF P+L L+
Sbjct: 190 LQNLKDAGLSSPTPIQMQAMPLMMHGRELLACAPTGSGKTLAFCIPLLAHLQ 241
>gi|402591380|gb|EJW85309.1| hypothetical protein WUBG_03780, partial [Wuchereria bancrofti]
Length = 676
Score = 97.1 bits (240), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 75/125 (60%), Gaps = 7/125 (5%)
Query: 77 KSSKQLVPAVDKEKEKVE--DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRT 133
K ++L A K+KEK E D +K L++ ERD +FR+ +NI + G VP PLR
Sbjct: 248 KQQEELRLAGVKKKEKKEAFDNRHWTQKSLDQMTERDWRIFREDFNISIKGGRVPKPLRN 307
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+ G S + + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P
Sbjct: 308 W----EEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIP 363
Query: 194 MLMKL 198
+L+ +
Sbjct: 364 LLVWI 368
>gi|427785455|gb|JAA58179.1| Putative atp-dependent rna helicase ddx23 [Rhipicephalus
pulchellus]
Length = 788
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 69/200 (34%), Positives = 104/200 (52%), Gaps = 22/200 (11%)
Query: 14 FDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPE---KAMVSFV----KKRKRKSIA 66
+ +KFV D+ SE+ A D++ + EK + + V + +K+++
Sbjct: 236 LNDRKFVFDW------DASEDTAVDYNPIYKEKHTVQFFGRGHVGGIDLKAQKKEQSKFY 289
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERDA-VFRKKYNIH 121
GE +E Q V + K K K E D + K L + ERD +FR+ +NI
Sbjct: 290 GELLERRRTQAEKDQEVVRLKKIKRKEEKQKWDDRHWSHKSLEEMQERDWRIFREDFNIT 349
Query: 122 VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAP 181
+ G +P+PLR + S + +L + ELGYK+PTPIQRQAIP+ L +R+ A
Sbjct: 350 IKGGRIPNPLRKW----SECNLPTAILDVIKELGYKDPTPIQRQAIPIGLQNRDIIGVAE 405
Query: 182 TGSGKTLAFLCPMLMKLRVL 201
TGSGKTLAFL P+L+ + L
Sbjct: 406 TGSGKTLAFLLPLLVWITSL 425
>gi|148222272|ref|NP_001086456.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 52 [Xenopus laevis]
gi|117167895|gb|AAI24841.1| LOC446276 protein [Xenopus laevis]
Length = 614
Score = 96.7 bits (239), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 63/95 (66%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+++E+ FR ++ I+V G ++P P TF +L + S +++N+ + G+ PTPIQ
Sbjct: 140 QQRLEKINHFRNEHKIYVQGTDIPEPAATFQQLEQEYKILSKIMQNVKDAGFHTPTPIQM 199
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIP++L DRE A APTGSGKT+AF P+L L+
Sbjct: 200 QAIPIMLHDREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|51261421|gb|AAH79986.1| LOC446276 protein, partial [Xenopus laevis]
Length = 587
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 63/95 (66%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+++E+ FR ++ I+V G ++P P TF +L + S +++N+ + G+ PTPIQ
Sbjct: 140 QQRLEKINHFRNEHKIYVQGTDIPEPAATFQQLEQEYKILSKIMQNVKDAGFHTPTPIQM 199
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIP++L DRE A APTGSGKT+AF P+L L+
Sbjct: 200 QAIPIMLHDREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|194748100|ref|XP_001956487.1| GF25239 [Drosophila ananassae]
gi|190623769|gb|EDV39293.1| GF25239 [Drosophila ananassae]
Length = 535
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 59/88 (67%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FRK+ NI V G NVP+PL +F L+ + L +N+ G+ +PTPIQ QA+PVLL
Sbjct: 88 AEFRKQNNITVLGKNVPAPLTSFEDLTKDYKLLPRLQQNVLSRGFAQPTPIQMQALPVLL 147
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
R ACAPTGSGKTLAFL P++ LR
Sbjct: 148 QRRALMACAPTGSGKTLAFLTPLINGLR 175
>gi|260946563|ref|XP_002617579.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
gi|238849433|gb|EEQ38897.1| hypothetical protein CLUG_03023 [Clavispora lusitaniae ATCC 42720]
Length = 561
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 45/87 (51%), Positives = 59/87 (67%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR++ + VSG +VP P+ +F L SRF +LLRNL E + EPT +Q +AIP+ L
Sbjct: 106 AAFRRRSHSKVSGHDVPLPIGSFHDLQSRFSMNKHLLRNLLEADFIEPTVVQCEAIPIAL 165
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACAPTGSGKT+AFL PM+ L
Sbjct: 166 HRRDLIACAPTGSGKTVAFLLPMVQLL 192
>gi|67677953|gb|AAH97566.1| LOC446276 protein, partial [Xenopus laevis]
Length = 585
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 63/95 (66%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+++E+ FR ++ I+V G ++P P TF +L + S +++N+ + G+ PTPIQ
Sbjct: 140 QQRLEKINHFRNEHKIYVQGTDIPEPAATFQQLEQEYKILSKIMQNVKDAGFHTPTPIQM 199
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIP++L DRE A APTGSGKT+AF P+L L+
Sbjct: 200 QAIPIMLHDREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|312077794|ref|XP_003141459.1| RNA helicase [Loa loa]
Length = 674
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 54/125 (43%), Positives = 74/125 (59%), Gaps = 7/125 (5%)
Query: 77 KSSKQLVPAVDKEKEKVE--DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRT 133
K ++L A K+KEK E D +K L + ERD +FR+ +NI + G VP PLR
Sbjct: 242 KQQEELRLAGVKKKEKKEAFDNRHWTQKSLEQMTERDWRIFREDFNISIKGGRVPKPLRN 301
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+ G S + + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P
Sbjct: 302 W----DEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIP 357
Query: 194 MLMKL 198
+L+ +
Sbjct: 358 LLVWI 362
>gi|424513172|emb|CCO66756.1| PREDICTED: similar to Zinc finger protein 271 (Zinc finger protein
7) (HZF7) (Zinc finger protein ZNFphex133) (Epstein-Barr
virus-induced zinc finger protein) (ZNF-EB) (CT-ZFP48)
(Zinc finger protein [Bathycoccus prasinos]
Length = 991
Score = 96.7 bits (239), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/90 (51%), Positives = 60/90 (66%), Gaps = 4/90 (4%)
Query: 113 VFRKKYNIHVSGAN----VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
+ RK+Y I V G + +P+PL +F L + +GC L+ L E + EPTPIQRQAIP
Sbjct: 463 IRRKEYKIKVKGDDSRNVIPAPLESFKDLETTYGCSKSLITRLEECKWLEPTPIQRQAIP 522
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
++L D E A APTGSGKTLAFL P+ M+L
Sbjct: 523 MMLRDVETLAVAPTGSGKTLAFLLPIFMRL 552
>gi|242005744|ref|XP_002423722.1| predicted protein [Pediculus humanus corporis]
gi|212506907|gb|EEB10984.1| predicted protein [Pediculus humanus corporis]
Length = 1130
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 46/94 (48%), Positives = 58/94 (61%)
Query: 106 KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
+Q E+ A R K + V G NVP PL F +L +RF +++NL GY PTPIQ Q
Sbjct: 722 QQEEKLAEARNKLKVSVIGTNVPWPLENFNELITRFHVSPNIVKNLENSGYNNPTPIQAQ 781
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
AIP +L R+ ACAPTGSGKT AFL P+ L+
Sbjct: 782 AIPAMLEGRQVLACAPTGSGKTAAFLVPIFYHLK 815
>gi|71897029|ref|NP_001025896.1| probable ATP-dependent RNA helicase DDX52 [Gallus gallus]
gi|60098635|emb|CAH65148.1| hypothetical protein RCJMB04_4d17 [Gallus gallus]
Length = 603
Score = 96.3 bits (238), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 104/213 (48%), Gaps = 21/213 (9%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAM-----------VSF 56
L AG FD ++F D RF + S ++ F ++ P ++ V
Sbjct: 10 LGAGARFDVRRFGLDARRFGVIRGSGGPPENLDFFGSKERAPLGSVGKQEDGAGRKDVEM 69
Query: 57 VKKRKRKSIAG--------ETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI 108
KRKR + +G ETV + +S + + + K K K E +++
Sbjct: 70 AGKRKRTAESGKRKRKKRQETVSVPELSESDGIMWMSSLEAKVKDTKDNKKPTAEKLERL 129
Query: 109 ERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
R+ + FR ++ I+V G ++P P+ TF +L + ++ N+ G++ PTPIQ QA
Sbjct: 130 RREKINRFRNQHRINVQGTDLPDPIATFDQLQKEYKVHPKVIENIQAAGFQVPTPIQMQA 189
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
IPV+L RE A APTGSGKTLAF P+L L+
Sbjct: 190 IPVMLHGRELLASAPTGSGKTLAFCIPLLTHLK 222
>gi|332020434|gb|EGI60854.1| Putative ATP-dependent RNA helicase DDX52 [Acromyrmex echinatior]
Length = 558
Score = 96.3 bits (238), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 71/194 (36%), Positives = 98/194 (50%), Gaps = 10/194 (5%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAG 67
L GV FD K+F D RF+ K S+N + VE K + + S K++
Sbjct: 10 LAVGVKFDVKRFRKDAERFQIVKPSKNEVKINNTVEKIKDEVLEPTESKAKRKYENEDVN 69
Query: 68 ET--VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGA 125
E + G V K VP K+++KV + A K L + E+ R I V+G+
Sbjct: 70 EITLLNGLCVPKDGS--VPV--KKRKKV----ATADKMLKLEQEKINHLRNMNRISVTGS 121
Query: 126 NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
+VP + F +L + LL N+ GY PTPIQ QAIP++L R+ ACAPTGSG
Sbjct: 122 HVPKLILEFNELKINYQVSENLLNNMKNSGYLYPTPIQMQAIPIMLEGRQILACAPTGSG 181
Query: 186 KTLAFLCPMLMKLR 199
KT AFL P++ LR
Sbjct: 182 KTAAFLLPIIHSLR 195
>gi|327291685|ref|XP_003230551.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Anolis
carolinensis]
Length = 487
Score = 95.9 bits (237), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 69/112 (61%), Gaps = 3/112 (2%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
K+ E+ + K ++ ++I R FR K+ I+V G ++P P+ TF +L + +
Sbjct: 26 KKNEEKQLSAEKLRQARQEKINR---FRNKHKIYVQGTDLPDPVATFEQLREEYKISPRI 82
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+RN+ G++ PTP+Q QAIP +L RE ACAPTGSGKTLAF P+L L+
Sbjct: 83 MRNVEAAGFQAPTPVQMQAIPAMLHRRELLACAPTGSGKTLAFSLPILTHLK 134
>gi|444317483|ref|XP_004179399.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
gi|387512440|emb|CCH59880.1| hypothetical protein TBLA_0C00640 [Tetrapisispora blattae CBS 6284]
Length = 579
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 59/86 (68%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+ R Y +++G +VP P+ +F L +RF + LL NL + + EPTPIQ +AIP+ L
Sbjct: 106 ILRNTYKGNITGNDVPLPIGSFDDLITRFSFDKRLLNNLIDNHFTEPTPIQSEAIPIALL 165
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
DR+ ACAPTGSGKT+AFL P+L ++
Sbjct: 166 DRDIVACAPTGSGKTMAFLIPLLQQI 191
>gi|260799746|ref|XP_002594845.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
gi|229280082|gb|EEN50856.1| hypothetical protein BRAFLDRAFT_124435 [Branchiostoma floridae]
Length = 724
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 65/117 (55%), Gaps = 26/117 (22%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E+ + FR+K IHV G+++P+P+ +F +L +G +L NL LGY+EPTPIQ QAIP
Sbjct: 157 EKLSEFRRKNRIHVQGSDIPAPVTSFQELQGVYGIHPQILTNLQGLGYEEPTPIQMQAIP 216
Query: 169 VLLS--------------------------DRECFACAPTGSGKTLAFLCPMLMKLR 199
++L RE ACAPTGSGKT AF+ P+L LR
Sbjct: 217 LMLQILTNLQGLGYEEPTPIQMQAIPLMLQRREILACAPTGSGKTAAFILPILHHLR 273
>gi|194758757|ref|XP_001961625.1| GF15062 [Drosophila ananassae]
gi|190615322|gb|EDV30846.1| GF15062 [Drosophila ananassae]
Length = 819
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ S G
Sbjct: 346 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPNPIRSW----SESGFPRE 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 402 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 456
>gi|393905846|gb|EJD74089.1| DEAD box ATP-dependent RNA helicase [Loa loa]
Length = 757
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 54/123 (43%), Positives = 73/123 (59%), Gaps = 7/123 (5%)
Query: 77 KSSKQLVPAVDKEKEKVE--DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRT 133
K ++L A K+KEK E D +K L + ERD +FR+ +NI + G VP PLR
Sbjct: 269 KQQEELRLAGVKKKEKKEAFDNRHWTQKSLEQMTERDWRIFREDFNISIKGGRVPKPLRN 328
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+ G S + + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P
Sbjct: 329 W----DEAGLPSEVFDVIMKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIP 384
Query: 194 MLM 196
+L+
Sbjct: 385 LLV 387
>gi|308801667|ref|XP_003078147.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
gi|116056598|emb|CAL52887.1| DEAD/DEAH box helicase, putative (ISS) [Ostreococcus tauri]
Length = 418
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 47/88 (53%), Positives = 59/88 (67%), Gaps = 2/88 (2%)
Query: 114 FRKKYNIHVSGAN--VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
RK+ I V GA+ P+PL+TF +L RF C LL + E + EPTPIQRQA+P+L
Sbjct: 94 MRKQLRIRVQGADGSCPAPLQTFDELEKRFKCGGRLLERMREAKFLEPTPIQRQAVPILC 153
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
E A APTGSGKTLAFL P++MKL+
Sbjct: 154 GKNELLAIAPTGSGKTLAFLLPIIMKLK 181
>gi|195115088|ref|XP_002002099.1| GI14145 [Drosophila mojavensis]
gi|193912674|gb|EDW11541.1| GI14145 [Drosophila mojavensis]
Length = 837
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ S G
Sbjct: 364 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPNPIRSW----SESGFPPE 419
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + +GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 420 IIEIIDSVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 474
>gi|241997980|ref|XP_002433633.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
gi|215495392|gb|EEC05033.1| DEAD box ATP-dependent RNA helicase, putative [Ixodes scapularis]
Length = 243
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/84 (52%), Positives = 57/84 (67%)
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
K+ I G +VP L +F +L+ R+ LLRN+A LGYKEPT +QRQAIP +L RE
Sbjct: 90 KRQRIRAKGTDVPELLSSFEELAPRYKLSQTLLRNIASLGYKEPTAVQRQAIPAMLERRE 149
Query: 176 CFACAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKT AFL P++ +L+
Sbjct: 150 LLCCAPTGSGKTAAFLVPIIGQLQ 173
>gi|339257348|ref|XP_003370044.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
gi|316965399|gb|EFV50121.1| putative DEAD/DEAH box helicase [Trichinella spiralis]
Length = 1007
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 52/135 (38%), Positives = 78/135 (57%), Gaps = 5/135 (3%)
Query: 62 RKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNI 120
R +AG ++ +S K KE ++ D +K L + +RD +FR+ YNI
Sbjct: 511 RGHVAGIDLKTQKKNQSQKNQKRLSAKEAKQKWDDRHWTQKSLEEMTDRDWRIFREDYNI 570
Query: 121 HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACA 180
+ G NVP P+R++++ G + +L + ++GY EPTPIQRQAIP+ L +R+ A
Sbjct: 571 SIKGGNVPKPIRSWLEA----GFPTEILDVIMKIGYTEPTPIQRQAIPIGLQNRDVIGVA 626
Query: 181 PTGSGKTLAFLCPML 195
TGSGKT AFL P+L
Sbjct: 627 ETGSGKTAAFLIPLL 641
>gi|403369815|gb|EJY84760.1| hypothetical protein OXYTRI_17392 [Oxytricha trifallax]
Length = 634
Score = 95.5 bits (236), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 89 EKEKVEDGPSKAKKEL-NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
+K+K+ D + K L NK+ E + RKKY I V G NVP L +F KL + G
Sbjct: 95 QKQKILDKIQEEYKHLMNKKREVENALRKKYRIKVEGDNVPELLDSFSKLKEKCGLSESF 154
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ L E G+K+PTP+Q QAIPVL + R A TGSGK+LAF+ PML L+
Sbjct: 155 MHKLKENGFKKPTPVQMQAIPVLFNRRSAIVLAETGSGKSLAFIAPMLHLLK 206
>gi|159479390|ref|XP_001697776.1| hypothetical protein CHLREDRAFT_176386 [Chlamydomonas reinhardtii]
gi|158274144|gb|EDO99928.1| predicted protein [Chlamydomonas reinhardtii]
Length = 555
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/97 (50%), Positives = 62/97 (63%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N E + RK I +G +VP+PL++F +L+SR+ LL L G+ PTPIQR
Sbjct: 124 NDPHEEANLIRKALRIKATGTDVPAPLKSFAELASRYKVGRRLLAALRAAGFTAPTPIQR 183
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
QAIP LL RE A APTGSGKTLAFL P+L +L+ L
Sbjct: 184 QAIPALLEGRELLAVAPTGSGKTLAFLVPLLARLKSL 220
>gi|403346916|gb|EJY72868.1| hypothetical protein OXYTRI_06004 [Oxytricha trifallax]
Length = 613
Score = 95.1 bits (235), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 89 EKEKVEDGPSKAKKEL-NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
+K+K+ D + K L NK+ E + RKKY I V G NVP L +F KL + G
Sbjct: 75 QKQKILDKIQEEYKHLMNKKREVENALRKKYRIKVEGDNVPELLDSFSKLKEKCGLSESF 134
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ L E G+K+PTP+Q QAIPVL + R A TGSGK+LAF+ PML L+
Sbjct: 135 MHKLKENGFKKPTPVQMQAIPVLFNRRSAIVLAETGSGKSLAFIAPMLHLLK 186
>gi|403372410|gb|EJY86104.1| hypothetical protein OXYTRI_15906 [Oxytricha trifallax]
Length = 614
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 67/112 (59%), Gaps = 1/112 (0%)
Query: 89 EKEKVEDGPSKAKKEL-NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
+K+K+ D + K L NK+ E + RKKY I V G NVP L +F KL + G
Sbjct: 75 QKQKILDKIQEEYKHLMNKKREVENALRKKYRIKVEGDNVPELLDSFSKLKEKCGLSESF 134
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ L E G+K+PTP+Q QAIPVL + R A TGSGK+LAF+ PML L+
Sbjct: 135 MHKLKENGFKKPTPVQMQAIPVLFNRRSAIVLAETGSGKSLAFIAPMLHLLK 186
>gi|357627267|gb|EHJ77004.1| putative DEAD box ATP-dependent RNA helicase [Danaus plexippus]
Length = 421
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 66/102 (64%), Gaps = 2/102 (1%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
P + +K+L ++E FR ++ I G ++P+ LR F +L +++ ++ L + GY
Sbjct: 97 PEELQKKL--ELEEQNHFRNEHGIKAVGRHIPNALRDFNELITKYNISPSMVEVLLQCGY 154
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
EPTPIQRQA+P LL +R+ ACAPTGSGKT AFL P+L L
Sbjct: 155 SEPTPIQRQAVPCLLENRQIVACAPTGSGKTAAFLMPLLHML 196
>gi|145344838|ref|XP_001416931.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577157|gb|ABO95224.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 474
Score = 95.1 bits (235), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 46/87 (52%), Positives = 59/87 (67%), Gaps = 2/87 (2%)
Query: 114 FRKKYNIHVSGAN--VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
RK+ + V GA+ P+PL+ F +L R+ C LL + E +KEPTPIQRQA+P+L
Sbjct: 1 MRKRLKMRVQGADGACPAPLQGFEELHERYKCGRRLLERMREANFKEPTPIQRQAVPILC 60
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
S E A APTGSGKTLAFL P++MKL
Sbjct: 61 SGSELLAIAPTGSGKTLAFLLPIIMKL 87
>gi|45187850|ref|NP_984073.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|74694371|sp|Q75AE1.1|ROK1_ASHGO RecName: Full=ATP-dependent RNA helicase ROK1
gi|44982634|gb|AAS51897.1| ADL024Cp [Ashbya gossypii ATCC 10895]
gi|374107288|gb|AEY96196.1| FADL024Cp [Ashbya gossypii FDAG1]
Length = 569
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 60/90 (66%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E + R+ Y V+GA+ P P+ +F L +RF + LL NL E + EPTPIQ +AIP
Sbjct: 96 EEASQLRRSYRGKVTGADAPLPIGSFEDLVTRFKLDKRLLSNLIENNFTEPTPIQCEAIP 155
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ L +R+ ACAPTGSGKTLAFL P+L ++
Sbjct: 156 ISLQNRDIVACAPTGSGKTLAFLIPLLQQV 185
>gi|45768538|gb|AAH67608.1| Ddx52 protein [Danio rerio]
Length = 501
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/135 (34%), Positives = 80/135 (59%), Gaps = 12/135 (8%)
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS--KAKKELNKQIERDAVFRKKYNIHVSG 124
GE ++ ++ +K+ K++ +D PS + K+ N+++ R R + I+V G
Sbjct: 1 GEGIQWMSLQNKTKE-------AKQESKDKPSLKRLKQLHNEKVNR---IRHQNRINVHG 50
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
++P P+ TF +L + + ++ N+ G++ PTPIQ QA+P+++ RE ACAPTGS
Sbjct: 51 TDIPDPVTTFEELQKEYDLDPRIIHNIKAAGFQTPTPIQMQAVPLMMHKREILACAPTGS 110
Query: 185 GKTLAFLCPMLMKLR 199
GKT+AF P+L LR
Sbjct: 111 GKTMAFCLPLLAHLR 125
>gi|195328469|ref|XP_002030937.1| GM24308 [Drosophila sechellia]
gi|194119880|gb|EDW41923.1| GM24308 [Drosophila sechellia]
Length = 592
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 50/98 (51%), Positives = 59/98 (60%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
EL K E RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 86 ELQKAAEEANETRKQYGIKVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDRPTPI 145
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
Q QA+PVLL R ACAPTGSGKTLAFL P++ LRV
Sbjct: 146 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIIDGLRV 183
>gi|24584994|ref|NP_609888.2| CG10333 [Drosophila melanogaster]
gi|22946759|gb|AAF53680.2| CG10333 [Drosophila melanogaster]
gi|60677727|gb|AAX33370.1| RH55640p [Drosophila melanogaster]
Length = 822
Score = 94.7 bits (234), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++KE ++ ERD +FR+ YN+ + G +P+P+R++ + G
Sbjct: 349 KEDKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----NESGFPKE 404
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 405 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 459
>gi|195591171|ref|XP_002085316.1| GD12376 [Drosophila simulans]
gi|194197325|gb|EDX10901.1| GD12376 [Drosophila simulans]
Length = 592
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 49/98 (50%), Positives = 59/98 (60%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
EL + E RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 86 ELQRAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDRPTPI 145
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
Q QA+PVLL R ACAPTGSGKTLAFL P++ LRV
Sbjct: 146 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIIDGLRV 183
>gi|195344854|ref|XP_002038991.1| GM17282 [Drosophila sechellia]
gi|194134121|gb|EDW55637.1| GM17282 [Drosophila sechellia]
Length = 822
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++KE ++ ERD +FR+ YN+ + G +P+P+R++ + G
Sbjct: 349 KEDKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----NESGFPKE 404
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 405 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 459
>gi|194880138|ref|XP_001974373.1| GG21122 [Drosophila erecta]
gi|190657560|gb|EDV54773.1| GG21122 [Drosophila erecta]
Length = 816
Score = 94.4 bits (233), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YN+ + G +P+P+R++ S G
Sbjct: 343 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----SESGFPKE 398
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 399 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 453
>gi|195484183|ref|XP_002090584.1| GE13195 [Drosophila yakuba]
gi|194176685|gb|EDW90296.1| GE13195 [Drosophila yakuba]
Length = 821
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YN+ + G +P+P+R++ S G
Sbjct: 348 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----SESGFPKE 403
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 404 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 458
>gi|367015264|ref|XP_003682131.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
gi|359749793|emb|CCE92920.1| hypothetical protein TDEL_0F01090 [Torulaspora delbrueckii]
Length = 551
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 43/87 (49%), Positives = 58/87 (66%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E RK Y +V+G ++P P+ +F L +RF + LL NL E + EPTPIQ + IP
Sbjct: 88 EEAMALRKSYKSNVTGEDIPLPIGSFEDLITRFQFDKRLLNNLIENHFTEPTPIQSEGIP 147
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPML 195
+ L++R+ ACAPTGSGKTLAFL P+L
Sbjct: 148 LALNNRDIVACAPTGSGKTLAFLIPLL 174
>gi|255075181|ref|XP_002501265.1| predicted protein [Micromonas sp. RCC299]
gi|226516529|gb|ACO62523.1| predicted protein [Micromonas sp. RCC299]
Length = 432
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 60/94 (63%), Gaps = 2/94 (2%)
Query: 107 QIERDAVFRKKYNIHVSGA--NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
Q E + RK + I V+GA + P PL TF L + G +L+ L + G+ EPTPIQR
Sbjct: 1 QEEAANILRKTHKIKVAGAVNSCPPPLATFEDLRTVHGLGRAMLQRLRDAGFHEPTPIQR 60
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
QAIP+LL E A APTGSGKTLAFL PM+ KL
Sbjct: 61 QAIPILLEGSELLAVAPTGSGKTLAFLLPMVTKL 94
>gi|410076108|ref|XP_003955636.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
gi|372462219|emb|CCF56501.1| hypothetical protein KAFR_0B02030 [Kazachstania africana CBS 2517]
Length = 571
Score = 94.4 bits (233), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 99/188 (52%), Gaps = 10/188 (5%)
Query: 18 KFVTDFARFKENKESENLADDFSFVEGEK--TDPEKAMVS-----FVKKRKRKSIAGETV 70
+ +T A K+N+ + + D+S +K T E+ ++ F KR + E +
Sbjct: 5 RVLTRGASVKKNQSNSGKSVDYSLETNKKKSTKHEEVQLTRELDFFRNKRIITKVEKEKI 64
Query: 71 EGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSP 130
+ F + +++E VED P K + E RK Y ++SG ++P P
Sbjct: 65 GKEDEFTTGTNEDEEGQEKEETVEDEPIKP---IITNAEEATALRKSYKGNISGEDIPFP 121
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
+ +F L +RF + LL NL + + EPTPIQ +++P+ L DR+ ACAPTGSGKTL+F
Sbjct: 122 IGSFEDLITRFNLDKRLLSNLIDNHFTEPTPIQCESLPITLYDRDLLACAPTGSGKTLSF 181
Query: 191 LCPMLMKL 198
L P++ ++
Sbjct: 182 LIPLVQQV 189
>gi|388857203|emb|CCF49216.1| probable ROK1-ATP-dependent RNA helicase [Ustilago hordei]
Length = 593
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 45/86 (52%), Positives = 59/86 (68%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F KK I V G +VP P+ ++ +L SRF + +L NL + G+ PT IQ+ A+PVLLS+
Sbjct: 139 FLKKNKIKVKGTDVPLPMASWGELESRFNVQPWLRTNLEKYGWGIPTAIQKGAMPVLLSN 198
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A APTGSGKTLAFL P+L LR
Sbjct: 199 RDLLAGAPTGSGKTLAFLLPLLHHLR 224
>gi|384487383|gb|EIE79563.1| hypothetical protein RO3G_04268 [Rhizopus delemar RA 99-880]
Length = 546
Score = 94.0 bits (232), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 62/95 (65%), Gaps = 1/95 (1%)
Query: 106 KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSS-RFGCESYLLRNLAELGYKEPTPIQR 164
K +E FRK+ I + G +VP+P RTF L+S + E L +NL + Y PTP+Q
Sbjct: 109 KTVEEAKEFRKQNKIKIYGTDVPNPFRTFEDLASPAYNLEPKLYKNLMNVKYTTPTPVQM 168
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q+IP++L R+ +CAPTGSGKT+A++ P+L L+
Sbjct: 169 QSIPIMLKGRDLMSCAPTGSGKTMAYVLPILQDLK 203
>gi|365983372|ref|XP_003668519.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
gi|343767286|emb|CCD23276.1| hypothetical protein NDAI_0B02410 [Naumovozyma dairenensis CBS 421]
Length = 571
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 63/90 (70%), Gaps = 1/90 (1%)
Query: 110 RDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
+DA+ RK Y +V+G ++P P+ +F L +RF + LL NL E + EPTPIQ ++IP
Sbjct: 108 KDALELRKSYKGNVTGQDIPLPIGSFEDLITRFSFDKRLLTNLIENHFTEPTPIQCESIP 167
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ L+ R+ ACAPTGSGKTLAFL P+L ++
Sbjct: 168 LALNSRDIVACAPTGSGKTLAFLIPLLQQI 197
>gi|380690627|gb|AFD93382.1| DEAD box ATP-dependent RNA helicase, partial [Cydia pomonella]
Length = 459
Score = 94.0 bits (232), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 69/108 (63%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ G S ++ + +
Sbjct: 76 DDRHWSEKDQDEMTERDWRIFREDYNITIKGGKIPNPIRSW----KEAGFHSDIMDIINK 131
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+GYK PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 132 VGYKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSL 179
>gi|195437654|ref|XP_002066755.1| GK24389 [Drosophila willistoni]
gi|194162840|gb|EDW77741.1| GK24389 [Drosophila willistoni]
Length = 808
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ + G
Sbjct: 335 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGRIPNPIRSW----NESGFPPE 390
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + +GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 391 IIDIIDRVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 445
>gi|195494738|ref|XP_002094967.1| GE22119 [Drosophila yakuba]
gi|194181068|gb|EDW94679.1| GE22119 [Drosophila yakuba]
Length = 594
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/98 (47%), Positives = 60/98 (61%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
EL + ++ RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 87 ELQRAVDEANETRKQYGISVLGKNVPPPVDSFGSLTKDFKMLPRLQQNLLSRNFDRPTPI 146
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
Q QA+PVLL R ACAPTGSGKTLAFL P++ L+V
Sbjct: 147 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLKV 184
>gi|50547433|ref|XP_501186.1| YALI0B21538p [Yarrowia lipolytica]
gi|74660084|sp|Q6CDS6.1|ROK1_YARLI RecName: Full=ATP-dependent RNA helicase ROK1
gi|49647052|emb|CAG83439.1| YALI0B21538p [Yarrowia lipolytica CLIB122]
Length = 547
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E VFR K+ I+++G + P P+ +F L +RF YLL NL + Y +PTPIQ ++IP
Sbjct: 84 EEAVVFRNKHKINITGEDSPLPIGSFEDLITRFNLHPYLLANLKKNKYTDPTPIQCESIP 143
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+L+ R+ ACAPTGSGKT+A+ PM+ L
Sbjct: 144 TMLNGRDLIACAPTGSGKTMAYSIPMVEML 173
>gi|354545812|emb|CCE42540.1| hypothetical protein CPAR2_201830 [Candida parapsilosis]
Length = 568
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 60/160 (37%), Positives = 96/160 (60%), Gaps = 15/160 (9%)
Query: 58 KKRKRKSIAGET---VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQ---IERD 111
+K K +SI + + F+ K +KQ VP EKE E +K +K+ ++ + +D
Sbjct: 53 RKHKEESILNQVEKETDFFHTRKHTKQ-VP----EKEATEPVFTKQEKDDDEAPPLVLKD 107
Query: 112 AVFRKKY-NIH---VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
A KK+ N+H V+G ++P+P+ +F + RF + LL NL + + EPT IQ ++I
Sbjct: 108 AEDAKKFRNLHRSKVTGDDIPTPIGSFEDMIGRFKIDKKLLSNLIDNDFIEPTAIQCESI 167
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
P+ LS+R+ ACAPTGSGKTLAFL P++ +L + + +Y
Sbjct: 168 PITLSNRDLIACAPTGSGKTLAFLIPLIQQLIINHVDKNY 207
>gi|195388290|ref|XP_002052813.1| GJ17767 [Drosophila virilis]
gi|194149270|gb|EDW64968.1| GJ17767 [Drosophila virilis]
Length = 835
Score = 93.6 bits (231), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ + G
Sbjct: 362 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPNPIRSW----NESGFPPE 417
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + +GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 418 IIEIIDTVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 472
>gi|195032613|ref|XP_001988529.1| GH11216 [Drosophila grimshawi]
gi|193904529|gb|EDW03396.1| GH11216 [Drosophila grimshawi]
Length = 864
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 73/115 (63%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ + G
Sbjct: 391 KEDKQKWDDRHWSEKDNDEMTERDWRIFREDYNITIKGGKIPNPIRSW----NESGFPPE 446
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + +GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 447 IIEIIDTVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 501
>gi|410915742|ref|XP_003971346.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like [Takifugu
rubripes]
Length = 628
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 73/234 (31%), Positives = 106/234 (45%), Gaps = 42/234 (17%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKES--ENLADDFSFV----------------------E 43
L AG FD K+F D ARFK ++ AD S + E
Sbjct: 10 LGAGAKFDLKRFSQDAARFKVHRSRGINPSADRLSAIDYFGAGQTNGAQISSNPHDSNEE 69
Query: 44 GEKTDPEKAMVSFVKKRKRKSIAGE-TVEGFNVFKSSKQLVPAVDKE-----------KE 91
+ D E + + KRK E V+ +QL K+ +
Sbjct: 70 NHEEDCEMENADWAARGKRKQKHAERDVKIKKKKSQKEQLDGGCSKDSNAGITWTSLLER 129
Query: 92 KVED-GPSKAKKELNKQI-----ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
K+ P + +K K++ E+ R + I+V G+++P P+ TF +L S + S
Sbjct: 130 KIHSLAPDEKEKHSMKRLKHLHQEKVNRIRSQNRINVHGSDIPDPVCTFDELQSEYHLNS 189
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+L+NL + G PTPIQ QAIP+++ RE ACAPTGSGKTLAF P+L L+
Sbjct: 190 RILQNLKDAGLCSPTPIQMQAIPLMMHGRELLACAPTGSGKTLAFCVPLLAHLQ 243
>gi|24666101|ref|NP_649009.1| CG5589 [Drosophila melanogaster]
gi|7293941|gb|AAF49303.1| CG5589 [Drosophila melanogaster]
Length = 594
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 58/97 (59%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
E+ K E RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 86 EIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPI 145
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q QA+PVLL R ACAPTGSGKTLAFL P++ LR
Sbjct: 146 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLR 182
>gi|332023103|gb|EGI63364.1| Putative ATP-dependent RNA helicase DDX23 [Acromyrmex echinatior]
Length = 789
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K LN+ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 316 KEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 371
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 372 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 426
>gi|193641157|ref|XP_001946607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Acyrthosiphon pisum]
Length = 721
Score = 93.6 bits (231), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++KEL++ ERD +FR+ YNI + G +P P+R + + + +S ++ + +
Sbjct: 254 DDRHWSEKELDEMTERDWRIFREDYNITIKGGRIPEPIRKWKEST----IKSEIMEIIEK 309
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+GYKEPTPIQRQAIP+ +R+ A TGSGKTLA+L P++ ++ L
Sbjct: 310 VGYKEPTPIQRQAIPIGFQNRDIIGVAETGSGKTLAYLIPLIEWIQSL 357
>gi|324505355|gb|ADY42303.1| ATP-dependent RNA helicase DDX23 [Ascaris suum]
Length = 515
Score = 93.2 bits (230), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/108 (44%), Positives = 66/108 (61%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D +K L + ERD +FR+ +NI + G VP PLR + + G S +L + +
Sbjct: 47 DNRHWTQKTLEEMQERDWRIFREDFNISIKGGRVPKPLRNW----AEAGLPSEVLDVIIK 102
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 103 IGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITSL 150
>gi|307201507|gb|EFN81270.1| Probable ATP-dependent RNA helicase DDX23 [Harpegnathos saltator]
Length = 679
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K LN+ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 206 KEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 261
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 262 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 316
>gi|209418026|gb|ACI46551.1| RE58551p [Drosophila melanogaster]
Length = 609
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 58/97 (59%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
E+ K E RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 101 EIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPI 160
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q QA+PVLL R ACAPTGSGKTLAFL P++ LR
Sbjct: 161 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLR 197
>gi|383792218|gb|AFH41849.1| FI20004p1 [Drosophila melanogaster]
Length = 609
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 58/97 (59%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
E+ K E RK+Y I V G NVP P+ +F L+ F L +NL + PTPI
Sbjct: 101 EIQKAAEEANETRKQYGIRVLGKNVPPPVDSFGTLTRDFKMLPRLQQNLLSRNFDHPTPI 160
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q QA+PVLL R ACAPTGSGKTLAFL P++ LR
Sbjct: 161 QMQALPVLLQRRALMACAPTGSGKTLAFLTPIINGLR 197
>gi|149239430|ref|XP_001525591.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152060503|sp|A5E1N2.1|ROK1_LODEL RecName: Full=ATP-dependent RNA helicase ROK1
gi|146451084|gb|EDK45340.1| ATP-dependent RNA helicase ROK1 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 553
Score = 93.2 bits (230), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 50/128 (39%), Positives = 73/128 (57%), Gaps = 17/128 (13%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-----------------VFRKKYNIHVSGANVPSP 130
K K+++ SK K NK ER++ VFR + V+G ++P P
Sbjct: 55 KSHRKLDEPSSKILKSKNKDEERESVAEIVPPLELESEEDARVFRNLHKSKVTGDDIPIP 114
Query: 131 LRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAF 190
+ +F + RF + +L NL + + EPTPIQ +AIP+ L++R+ ACAPTGSGKTLAF
Sbjct: 115 IGSFQDMIGRFKIDKRVLSNLLDAEFVEPTPIQCEAIPITLANRDLIACAPTGSGKTLAF 174
Query: 191 LCPMLMKL 198
L P+L +L
Sbjct: 175 LIPLLQQL 182
>gi|308497408|ref|XP_003110891.1| CRE-DDX-23 protein [Caenorhabditis remanei]
gi|308242771|gb|EFO86723.1| CRE-DDX-23 protein [Caenorhabditis remanei]
Length = 766
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 64/101 (63%), Gaps = 5/101 (4%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KEL++ +RD +FR+ +NI + G VP PLR + G S + + + E+GY EPT
Sbjct: 295 KELSEMTDRDWRIFREDFNISIKGGRVPRPLRNW----EEAGFPSEVYQAVKEIGYMEPT 350
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 351 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 391
>gi|393247738|gb|EJD55245.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 565
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 69/118 (58%), Gaps = 5/118 (4%)
Query: 85 AVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIH---VSGANVPSPLRTFVKLSSRF 141
A D E+ E+GP+ K+ LN+ ++DA H G++VP PL++F L RF
Sbjct: 69 ATDSEESSDEEGPATKKRRLNE--DKDAATAPAPAAHRVSTKGSDVPEPLQSFASLKDRF 126
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
S LL+NL E GY PT +Q IP+LL R+ A +PTG+GKTLA+ P+ +L+
Sbjct: 127 SLSSRLLQNLDECGYTTPTGVQEYGIPILLEGRDLAAISPTGTGKTLAYTLPVFARLK 184
>gi|281209492|gb|EFA83660.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 880
Score = 93.2 bits (230), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 41/86 (47%), Positives = 56/86 (65%), Gaps = 1/86 (1%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSR-FGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
R + I V G ++P P+ F +L + ++YL RN+A +GY +P+PIQ QAIP +L
Sbjct: 362 LRNRMRIKVKGTDIPEPIEYFKELDGEPYSLKNYLSRNIASMGYSQPSPIQMQAIPAILK 421
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
+RE ACAPTGSGKT AF P+L L
Sbjct: 422 EREVIACAPTGSGKTAAFTIPILHTL 447
>gi|432866547|ref|XP_004070857.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Oryzias
latipes]
Length = 802
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R + + ++
Sbjct: 328 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRNW----KEYALPAH 383
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 384 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 438
>gi|254571881|ref|XP_002493050.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|238032848|emb|CAY70871.1| ATP-dependent RNA helicase of the DEAD box family [Komagataella
pastoris GS115]
gi|328352938|emb|CCA39336.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 544
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA FRK + + V G ++P P+ +F L +RF + LL NLA+ + EPTPIQ ++I
Sbjct: 89 ESDAKAFRKAFKVQVVGNDIPFPIGSFEDLITRFQLDKKLLSNLADAKFTEPTPIQCESI 148
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P L + ACAPTGSGKTLAFL P++ KL
Sbjct: 149 PSTLHGHDIIACAPTGSGKTLAFLIPLVQKL 179
>gi|190702284|gb|ACE75181.1| ATP-dependent RNA helicase [Glyptapanteles flavicoxis]
Length = 796
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/115 (41%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K LN+ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 323 KEEKQKWDDRHWSEKALNEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 378
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 379 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 433
>gi|326931593|ref|XP_003211912.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Meleagris gallopavo]
Length = 814
Score = 92.8 bits (229), Expect = 7e-17, Method: Composition-based stats.
Identities = 55/143 (38%), Positives = 82/143 (57%), Gaps = 3/143 (2%)
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAV--FRK 116
KRKRK I ETV + +S+ + + + K K K E +++ R+ + FR
Sbjct: 292 KRKRKKIQ-ETVSVPELSESNGIMWMSSLEAKVKDTKDNKKPTAEKLERLRREKINRFRN 350
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
++ I+V G ++P P+ TF +L + ++ N+ G++ PTPIQ QAIPV+L RE
Sbjct: 351 QHRINVQGTDLPDPVATFDQLQKEYKVHPKVIENIQAAGFQVPTPIQMQAIPVMLHGREL 410
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
A APTGSGKTLAF P+L L+
Sbjct: 411 LASAPTGSGKTLAFCIPLLTHLK 433
>gi|148226210|ref|NP_001079530.1| Probable ATP-dependent RNA helicase DDX52-like [Xenopus laevis]
gi|27882196|gb|AAH44017.1| MGC53409 protein [Xenopus laevis]
Length = 686
Score = 92.8 bits (229), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 61/95 (64%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+++E+ FR + I++ G ++P P TF +L + S +++N+ + G+ PTPIQ
Sbjct: 140 QQRLEKINHFRNEQKIYIQGTDIPEPAATFQQLEQEYKIHSKIMQNVKDAGFHTPTPIQM 199
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QAIP++L RE A APTGSGKT+AF P+L L+
Sbjct: 200 QAIPIMLHGREILASAPTGSGKTMAFSIPILAHLQ 234
>gi|194871760|ref|XP_001972900.1| GG15782 [Drosophila erecta]
gi|190654683|gb|EDV51926.1| GG15782 [Drosophila erecta]
Length = 592
Score = 92.8 bits (229), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 47/97 (48%), Positives = 58/97 (59%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
EL + ++ RK+Y I V G NVP P+ +F L+ F L NL + PTPI
Sbjct: 85 ELQRAVDEANETRKQYGISVLGKNVPPPVASFSSLTKDFKMLPRLQLNLLSRNFDRPTPI 144
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q QA+PVLL R ACAPTGSGKTLAFL P++ LR
Sbjct: 145 QMQALPVLLQGRALMACAPTGSGKTLAFLTPIINGLR 181
>gi|195379282|ref|XP_002048409.1| GJ13954 [Drosophila virilis]
gi|194155567|gb|EDW70751.1| GJ13954 [Drosophila virilis]
Length = 605
Score = 92.8 bits (229), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 45/89 (50%), Positives = 62/89 (69%), Gaps = 1/89 (1%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSS-RFGCESYLLRNLAELGYKEPTPIQRQAIPVL 170
+ RK+++I V G +VP+P+ +F +LS+ F L NL G+ +PTPIQ QA+PVL
Sbjct: 100 SALRKEHSITVLGKDVPAPISSFDELSTPHFKLLPRLQENLLSYGFAQPTPIQMQALPVL 159
Query: 171 LSDRECFACAPTGSGKTLAFLCPMLMKLR 199
L++R ACAPTGSGKTLAFL P++ LR
Sbjct: 160 LNNRALMACAPTGSGKTLAFLTPIINGLR 188
>gi|348518535|ref|XP_003446787.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Oreochromis niloticus]
Length = 616
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 95 DGPSKAKKELNKQIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
DG K+ + K + ++ V R + I+V G ++P P+ TF +L S + +L+NL
Sbjct: 141 DGKEKSSMKRLKHLHQEKVNRIRAQNRINVHGCDIPDPVCTFEELQSEYRLNPRVLQNLR 200
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ G PTPIQ QA+P+++ RE ACAPTGSGKTLAF P+L +L+
Sbjct: 201 DAGLSSPTPIQMQAMPLMMHGRELLACAPTGSGKTLAFCLPLLAQLQ 247
>gi|320583779|gb|EFW97992.1| ATP-dependent RNA helicase ROK1 [Ogataea parapolymorpha DL-1]
Length = 547
Score = 92.4 bits (228), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/85 (51%), Positives = 55/85 (64%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK Y VSG ++ P+ +F L +RF LL NL G+ EPTPIQ +AIP L+D
Sbjct: 91 LRKSYGAKVSGDDLHLPIGSFEDLVTRFKLNKQLLDNLISNGFTEPTPIQCEAIPACLAD 150
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ CAPTGSGKTLAFL PM+ +L
Sbjct: 151 RDLICCAPTGSGKTLAFLIPMVQQL 175
>gi|198466271|ref|XP_002135148.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
gi|198150524|gb|EDY73775.1| GA23405 [Drosophila pseudoobscura pseudoobscura]
Length = 597
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 45/99 (45%), Positives = 62/99 (62%)
Query: 101 KKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
+KEL K E+ RK+++I G N+P+P+ +F L + L +N+ G+ +PT
Sbjct: 88 QKELQKITEQANASRKQHSITALGKNIPAPVLSFDDLIRDYKLLPRLQQNVLSYGFSQPT 147
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+PVL R ACAPTGSGKTLAFL P++ LR
Sbjct: 148 PIQMQALPVLFQKRALMACAPTGSGKTLAFLTPIINGLR 186
>gi|255719940|ref|XP_002556250.1| KLTH0H08646p [Lachancea thermotolerans]
gi|238942216|emb|CAR30388.1| KLTH0H08646p [Lachancea thermotolerans CBS 6340]
Length = 566
Score = 92.0 bits (227), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 61/90 (67%), Gaps = 1/90 (1%)
Query: 110 RDAVF-RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
DAV RK Y +V+G ++P P+ +F L +RF + LL NL E + EPTPIQ +AIP
Sbjct: 100 HDAVLLRKSYKGNVTGQDLPLPIGSFEDLITRFQFDKRLLSNLIESHFTEPTPIQCEAIP 159
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ L R+ ACAPTGSGKT+AF+ P+L ++
Sbjct: 160 LALEGRDVLACAPTGSGKTVAFILPLLQQI 189
>gi|380021885|ref|XP_003694787.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Apis florea]
Length = 788
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K L++ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 315 KEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 370
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 371 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 425
>gi|195166521|ref|XP_002024083.1| GL22752 [Drosophila persimilis]
gi|194107438|gb|EDW29481.1| GL22752 [Drosophila persimilis]
Length = 597
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 45/102 (44%), Positives = 63/102 (61%)
Query: 98 SKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
S ++EL K E+ RK+++I G N+P+P+ +F L + L +N+ G+
Sbjct: 85 SAEQQELQKITEQANASRKQHSITALGKNIPAPVLSFDDLIRDYKLLPRLQQNVLSYGFS 144
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+PTPIQ QA+PVL R ACAPTGSGKTLAFL P++ LR
Sbjct: 145 QPTPIQMQALPVLFQKRALMACAPTGSGKTLAFLTPIINGLR 186
>gi|340724474|ref|XP_003400607.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
terrestris]
Length = 784
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K L++ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 311 KEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 366
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 367 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 421
>gi|350424960|ref|XP_003493968.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Bombus
impatiens]
Length = 784
Score = 91.7 bits (226), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K L++ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 311 KEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 366
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 367 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 421
>gi|298708634|emb|CBJ26121.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 516
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 71/117 (60%), Gaps = 9/117 (7%)
Query: 90 KEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES---- 145
K VE G +KA+ + ++E A FR++ I V G V P+ +F ++ S E
Sbjct: 19 KGGVETGEAKAR---SIRLEEVACFRRRMGIKVKGEEVADPMESFSEMPSATTSEDAGQT 75
Query: 146 --YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
LL N+ E +KEPTP+Q QA+P+L++ R+ A APTGSGKT AF+ PM+++L V
Sbjct: 76 RRVLLHNVEESAWKEPTPVQMQAVPILVAGRDLLAAAPTGSGKTAAFVMPMILRLGV 132
>gi|383854652|ref|XP_003702834.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Megachile
rotundata]
Length = 784
Score = 91.3 bits (225), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE+++ D ++K L++ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 311 KEEKQKWDDRHWSEKALHEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 366
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+ + L
Sbjct: 367 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLLWITSL 421
>gi|363746013|ref|XP_003643496.1| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial
[Gallus gallus]
Length = 394
Score = 91.3 bits (225), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 87/149 (58%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERDA- 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 105 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 164
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ K SS ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 165 IFREDYSITTKGGKIPNPIRSW-KDSS---LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 220
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 221 NRDIIGVAETGSGKTAAFLIPLLVWITTL 249
>gi|294657726|ref|XP_460025.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
gi|218511815|sp|Q6BP45.2|ROK1_DEBHA RecName: Full=ATP-dependent RNA helicase ROK1
gi|199432904|emb|CAG88281.2| DEHA2E16632p [Debaryomyces hansenii CBS767]
Length = 550
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 41/85 (48%), Positives = 55/85 (64%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK VSG ++P P+ +F L R+ + LL NL + G+ EPTPIQ +AIP+ L
Sbjct: 92 LRKLNKSKVSGEDIPLPIGSFEDLIGRYKLDKKLLSNLIDAGFTEPTPIQDEAIPISLEG 151
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACAPTGSGKTLAFL P++ +
Sbjct: 152 RDLIACAPTGSGKTLAFLIPLVQTI 176
>gi|195021969|ref|XP_001985492.1| GH14471 [Drosophila grimshawi]
gi|193898974|gb|EDV97840.1| GH14471 [Drosophila grimshawi]
Length = 603
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 49/109 (44%), Positives = 71/109 (65%), Gaps = 8/109 (7%)
Query: 99 KAKKELN-------KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSS-RFGCESYLLRN 150
KAKK+L+ ++ E+ + RK+ +I V G +VP+P+ +F +L+S + L N
Sbjct: 77 KAKKQLSPEQLEQLQRAEQISALRKENSITVLGKDVPAPISSFDELNSPHYNLLPRLQEN 136
Query: 151 LAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
L G+ +PT IQ QA+PVLL++R ACAPTGSGKTLAFL P++ LR
Sbjct: 137 LLSYGFAQPTAIQMQALPVLLANRALMACAPTGSGKTLAFLTPIINSLR 185
>gi|296211536|ref|XP_002752462.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Callithrix
jacchus]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|403296528|ref|XP_003939155.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Saimiri
boliviensis boliviensis]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|291389065|ref|XP_002711079.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Oryctolagus
cuniculus]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|395841632|ref|XP_003793638.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Otolemur
garnettii]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|114644988|ref|XP_509035.2| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2 [Pan
troglodytes]
gi|410219876|gb|JAA07157.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410251880|gb|JAA13907.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410291824|gb|JAA24512.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
gi|410334543|gb|JAA36218.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Pan troglodytes]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|386780941|ref|NP_001247801.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|380785261|gb|AFE64506.1| probable ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|383409609|gb|AFH28018.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
gi|384941744|gb|AFI34477.1| putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|355683257|gb|AER97065.1| DEAD box polypeptide 23 [Mustela putorius furo]
Length = 818
Score = 90.9 bits (224), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|431901383|gb|ELK08409.1| Putative ATP-dependent RNA helicase DDX23 [Pteropus alecto]
Length = 820
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|73996608|ref|XP_851051.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 2
[Canis lupus familiaris]
Length = 820
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|41327771|ref|NP_004809.2| probable ATP-dependent RNA helicase DDX23 [Homo sapiens]
gi|397510970|ref|XP_003825856.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Pan paniscus]
gi|160385708|sp|Q9BUQ8.3|DDX23_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=100 kDa U5 snRNP-specific protein; AltName:
Full=DEAD box protein 23; AltName: Full=PRP28 homolog;
AltName: Full=U5-100kD
gi|12803125|gb|AAH02366.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Homo sapiens]
gi|119578415|gb|EAW58011.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|119578419|gb|EAW58015.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_b [Homo
sapiens]
gi|123981044|gb|ABM82351.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|123995847|gb|ABM85525.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [synthetic construct]
gi|189065458|dbj|BAG35297.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|410964263|ref|XP_003988675.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Felis catus]
Length = 820
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|7446043|pir||T15942 hypothetical protein F01F1.7 - Caenorhabditis elegans
Length = 701
Score = 90.5 bits (223), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/101 (46%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KEL++ +RD +FR+ +NI + G VP PLR + + F E Y + + E+GY EPT
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNWEEAG--FPDEVY--QAVKEIGYLEPT 325
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 326 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 366
>gi|426372419|ref|XP_004053121.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Gorilla
gorilla gorilla]
Length = 783
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|156121051|ref|NP_001095672.1| probable ATP-dependent RNA helicase DDX23 [Bos taurus]
gi|151554096|gb|AAI47903.1| DDX23 protein [Bos taurus]
gi|296487810|tpg|DAA29923.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Bos taurus]
gi|440905541|gb|ELR55911.1| Putative ATP-dependent RNA helicase DDX23 [Bos grunniens mutus]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|2655202|gb|AAB87902.1| U5 snRNP 100 kD protein [Homo sapiens]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|417404803|gb|JAA49138.1| Putative rna helicase [Desmodus rotundus]
Length = 818
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 344 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 399
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 400 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 454
>gi|344267898|ref|XP_003405802.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Loxodonta
africana]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|449275677|gb|EMC84446.1| putative ATP-dependent RNA helicase DDX23 [Columba livia]
Length = 795
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 342 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 397
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 398 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 452
>gi|158259303|dbj|BAF85610.1| unnamed protein product [Homo sapiens]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|456753028|gb|JAA74080.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Sus scrofa]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|444515387|gb|ELV10886.1| putative ATP-dependent RNA helicase DDX23 [Tupaia chinensis]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|197100123|ref|NP_001125347.1| probable ATP-dependent RNA helicase DDX23 [Pongo abelii]
gi|67460452|sp|Q5RC67.1|DDX23_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX23; AltName:
Full=DEAD box protein 23
gi|55727779|emb|CAH90640.1| hypothetical protein [Pongo abelii]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|348580205|ref|XP_003475869.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Cavia
porcellus]
Length = 819
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|332206915|ref|XP_003252542.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23 [Nomascus leucogenys]
Length = 778
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|197246501|gb|AAI69082.1| Ddx23 protein [Rattus norvegicus]
Length = 798
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 324 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 379
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 380 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 434
>gi|402885838|ref|XP_003906352.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Papio anubis]
Length = 818
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 344 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 399
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 400 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 454
>gi|332374956|gb|AEE62619.1| unknown [Dendroctonus ponderosae]
Length = 588
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 48/111 (43%), Positives = 67/111 (60%), Gaps = 4/111 (3%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
+K K+ D KK+L + E +R +NI V G VP+P RTF S + +
Sbjct: 75 KKRKLLDEEQLQKKKLLLEQEEVNHYRNIHNITVVGRKVPAPARTF----SDLKVKESTI 130
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
NL + GY++PTPIQ+QA+P++L R ACAPTGSGKT AFL P++ L+
Sbjct: 131 ENLRKCGYEDPTPIQKQAMPIMLQGRHLLACAPTGSGKTAAFLVPIIEALK 181
>gi|327264401|ref|XP_003217002.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Anolis
carolinensis]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|149714248|ref|XP_001504169.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 isoform 1
[Equus caballus]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|261337192|ref|NP_001100263.2| probable ATP-dependent RNA helicase DDX23 [Rattus norvegicus]
gi|149032134|gb|EDL87046.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 (predicted), isoform
CRA_b [Rattus norvegicus]
Length = 819
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|354497364|ref|XP_003510790.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Cricetulus griseus]
gi|344254301|gb|EGW10405.1| putative ATP-dependent RNA helicase DDX23 [Cricetulus griseus]
Length = 819
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|167534955|ref|XP_001749152.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772305|gb|EDQ85958.1| predicted protein [Monosiga brevicollis MX1]
Length = 543
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 45/91 (49%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKL---SSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
A RK++ IHV G++VP+P+ +F +L ++ S LL+ L E +KEP+PIQ QAIP
Sbjct: 53 AALRKRHRIHVRGSDVPAPVTSFAQLGKPAAGPAASSGLLQALTEF-FKEPSPIQMQAIP 111
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LLS+R+ APTGSGKTLAF PM+ L+
Sbjct: 112 ALLSNRDVVGVAPTGSGKTLAFAVPMMQLLQ 142
>gi|124430514|ref|NP_001074450.1| probable ATP-dependent RNA helicase DDX23 [Mus musculus]
gi|148672229|gb|EDL04176.1| mCG18410, isoform CRA_a [Mus musculus]
Length = 819
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|193785886|dbj|BAG54673.1| unnamed protein product [Homo sapiens]
Length = 800
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 326 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 381
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 382 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 436
>gi|351697633|gb|EHB00552.1| Putative ATP-dependent RNA helicase DDX23 [Heterocephalus glaber]
Length = 819
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 345 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 400
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 401 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 455
>gi|156836663|ref|XP_001642382.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
gi|160358656|sp|A7TT88.1|ROK1_VANPO RecName: Full=ATP-dependent RNA helicase ROK1
gi|156112896|gb|EDO14524.1| hypothetical protein Kpol_274p7 [Vanderwaltozyma polyspora DSM
70294]
Length = 570
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 60/90 (66%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E + RK +VSG ++P P+ +F L +RF + LL NL + EPTPIQ +AIP
Sbjct: 104 EEAKLLRKSNKSNVSGEDIPLPIGSFEDLITRFSFDKRLLNNLILNHFTEPTPIQCEAIP 163
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ L++R+ ACAPTGSGKTLAFL P++ ++
Sbjct: 164 LALNNRDMLACAPTGSGKTLAFLIPLIQQV 193
>gi|395528498|ref|XP_003766366.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Sarcophilus
harrisii]
Length = 818
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 344 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 399
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 400 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 454
>gi|301783663|ref|XP_002927245.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Ailuropoda melanoleuca]
gi|281343724|gb|EFB19308.1| hypothetical protein PANDA_017010 [Ailuropoda melanoleuca]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|126344320|ref|XP_001381629.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Monodelphis
domestica]
Length = 818
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 344 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 399
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 400 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 454
>gi|432114505|gb|ELK36353.1| Putative ATP-dependent RNA helicase DDX23 [Myotis davidii]
Length = 820
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|344233769|gb|EGV65639.1| hypothetical protein CANTEDRAFT_129123 [Candida tenuis ATCC 10573]
Length = 556
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 60/182 (32%), Positives = 92/182 (50%), Gaps = 15/182 (8%)
Query: 23 FARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQL 82
+R ++S+ + DFS P + +S + RK K++ E + + F + +
Sbjct: 7 LSRGASLRKSKQYSADFSL-------PTQGELS-TETRKEKTLQHEIDKETDFFHTKRST 58
Query: 83 VPAVDKEKEKVEDGPSKAKKE------LNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV 135
+ + D P+ E L E DA FRK VSG ++P P+ +F
Sbjct: 59 NIEPQDQHQLATDEPANVVTEVPEVPPLQISTEEDAATFRKINKSKVSGNDIPMPIGSFE 118
Query: 136 KLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
L SR+ LL NL + EPTPIQ +++P +L++R+ ACAPTGSGKTLA+L P+L
Sbjct: 119 DLISRYDINKKLLDNLLRSEFVEPTPIQCESVPAILNERDLIACAPTGSGKTLAYLIPLL 178
Query: 196 MK 197
K
Sbjct: 179 QK 180
>gi|357601923|gb|EHJ63191.1| hypothetical protein KGM_14588 [Danaus plexippus]
Length = 829
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 70/108 (64%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++K+ ++ ERD +FR+ YNI + G +P+P+R++ + + ++ +++
Sbjct: 363 DDRHWSEKDQDEMTERDWRIFREDYNITLKGGRIPNPIRSWKEAN----FHEDIMEIISK 418
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+GYK PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 419 VGYKSPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLTWIQSL 466
>gi|350596902|ref|XP_003126138.3| PREDICTED: probable ATP-dependent RNA helicase DDX23, partial [Sus
scrofa]
Length = 771
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERDA- 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 312 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 371
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ S ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 372 IFREDYSITTKGGKIPNPIRSWKDSS----LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 427
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 428 NRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|119578417|gb|EAW58013.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_d [Homo
sapiens]
Length = 618
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|242080401|ref|XP_002444969.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
gi|241941319|gb|EES14464.1| hypothetical protein SORBIDRAFT_07g002100 [Sorghum bicolor]
Length = 946
Score = 90.5 bits (223), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 61/88 (69%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
AV+RK+ + V G +VP P++T+++ G S LL + +LG+++P PIQ QA+PV++
Sbjct: 345 AVYRKELELKVHGKDVPKPIKTWLQ----SGQTSKLLDTIKKLGFEKPMPIQAQALPVIM 400
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAFL PML ++
Sbjct: 401 SGRDCIGVAKTGSGKTLAFLLPMLRHVK 428
>gi|32565321|ref|NP_498260.2| Protein DDX-23 [Caenorhabditis elegans]
gi|351058526|emb|CCD65989.1| Protein DDX-23 [Caenorhabditis elegans]
Length = 730
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 5/101 (4%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KEL++ +RD +FR+ +NI + G VP PLR + G + + + E+GY EPT
Sbjct: 270 KELSEMSDRDWRIFREDFNISIKGGRVPRPLRNW----EEAGFPDEVYQAVKEIGYLEPT 325
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 326 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 366
>gi|426224567|ref|XP_004006440.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Ovis aries]
Length = 820
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPVRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|366990303|ref|XP_003674919.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
gi|342300783|emb|CCC68547.1| hypothetical protein NCAS_0B04630 [Naumovozyma castellii CBS 4309]
Length = 563
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 57/85 (67%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK Y +++G ++P P+ +F L +RF + LL NL E + EPTPIQ +++P+ L
Sbjct: 103 LRKSYKGNITGEDIPLPIGSFEDLITRFSLDRRLLNNLIENHFTEPTPIQCESLPLALHG 162
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACAPTGSGKTLAFL P+ ++
Sbjct: 163 RDILACAPTGSGKTLAFLIPLFQQI 187
>gi|341888469|gb|EGT44404.1| CBN-DDX-23 protein [Caenorhabditis brenneri]
Length = 574
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/101 (45%), Positives = 65/101 (64%), Gaps = 5/101 (4%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K+L++ +RD +FR+ +NI + G VP PLR + + F E Y + + E+GY EPT
Sbjct: 278 KQLHEMTDRDWRIFREDFNISIKGGKVPRPLRNWEEAG--FPQEVY--QAVREIGYLEPT 333
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 334 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLVWITSL 374
>gi|440804141|gb|ELR25019.1| DEAD/DEAH box helicase [Acanthamoeba castellanii str. Neff]
Length = 643
Score = 90.1 bits (222), Expect = 5e-16, Method: Composition-based stats.
Identities = 46/97 (47%), Positives = 61/97 (62%), Gaps = 2/97 (2%)
Query: 103 ELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
E K+ ER R + I V G +VP+P+ F +L + +YLLRN+ GY PTPI
Sbjct: 187 EQQKERERVNNLRHAHKIRVKGGDVPAPITAFAELEASM--RAYLLRNIEAAGYTTPTPI 244
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
Q Q+IP+LL RE A APTGSGKT A++ P+L KL+
Sbjct: 245 QMQSIPILLHGRELMAIAPTGSGKTAAYVLPILSKLK 281
>gi|119578420|gb|EAW58016.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_f [Homo
sapiens]
Length = 526
Score = 90.1 bits (222), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 72/115 (62%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +FR+ Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|449479900|ref|XP_002199492.2| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Taeniopygia
guttata]
Length = 615
Score = 90.1 bits (222), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 48/113 (42%), Positives = 67/113 (59%), Gaps = 7/113 (6%)
Query: 92 KVEDGPSKAKKELNKQIER-----DAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KVED +K KK +++ER FR ++ I+V G ++P P+ TF +L +
Sbjct: 124 KVED--AKDKKPTAEKLERLRREKINRFRHQHRINVQGTDLPDPIATFEQLQQEYKVHPK 181
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++ N+ G+ PT IQ QAIPV+L RE A APTGSGKTLAF P+L L+
Sbjct: 182 IMENIHAAGFHVPTAIQMQAIPVMLHGRELLASAPTGSGKTLAFCIPLLTHLK 234
>gi|343426178|emb|CBQ69709.1| probable ROK1-ATP-dependent RNA helicase [Sporisorium reilianum
SRZ2]
Length = 614
Score = 89.7 bits (221), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
+ F K I + G +VP P+ ++ +L +RF + +L NL + G+ PT IQ+ A+PVLL
Sbjct: 147 STFLKTNKIKLKGTDVPLPMASWSELETRFNVQPWLRTNLDKWGWGVPTAIQKGAMPVLL 206
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
++R+ A APTGSGKTLAFL P++ LR
Sbjct: 207 ANRDLLAGAPTGSGKTLAFLLPLIHHLR 234
>gi|148672231|gb|EDL04178.1| mCG18410, isoform CRA_c [Mus musculus]
Length = 466
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERDA- 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 144 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 203
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ S ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 204 IFREDYSITTKGGKIPNPIRSWKDSS----LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 259
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 260 NRDIIGVAETGSGKTAAFLIPLLVWITTL 288
>gi|223590136|sp|A5DF03.2|PRP28_PICGU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|190345810|gb|EDK37756.2| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 89.7 bits (221), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K+L RD +F++ ++I G N+P+PLR++ G + LL + +LGYKE
Sbjct: 117 SDKKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSW----KESGIPTTLLNTIDQLGYKE 172
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQR AIP L R+ A TGSGKTLAFL P+L L +
Sbjct: 173 PTPIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAI 215
>gi|358331630|dbj|GAA50408.1| probable ATP-dependent RNA helicase DDX23, partial [Clonorchis
sinensis]
Length = 903
Score = 89.7 bits (221), Expect = 7e-16, Method: Composition-based stats.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 5/117 (4%)
Query: 80 KQLVPAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
K+L +E + D +K L++ +ERD +FR+ Y I G N+P+PLR++ ++
Sbjct: 65 KRLDDVAKREARQKYDDRHWTEKALSQMVERDWRIFREDYGISTKGGNIPNPLRSWAEMD 124
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ L + ++GY +PTPIQRQAIP+ L +R+ A TGSGKT AFL P+L
Sbjct: 125 A----SPELKEVIKKVGYADPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL 177
>gi|74654532|sp|Q9Y7C4.1|ROK1_CANAL RecName: Full=ATP-dependent RNA helicase CHR1
gi|4589366|gb|AAD26468.1| DEAD box RNA helicase [Candida albicans]
Length = 578
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 66/198 (33%), Positives = 100/198 (50%), Gaps = 16/198 (8%)
Query: 7 FLFAGVSFDKKK-FVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSI 65
L G S +KKK TD+A E + + S + + + + F RK S
Sbjct: 6 ILSRGASLNKKKGITTDYALPSEKQTQKQKHKQESLLNEVERETD-----FFHTRKHNS- 59
Query: 66 AGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL----NKQIERDA-VFRKKYNI 120
T G K K A ++E++E +KAK+E E DA FR +
Sbjct: 60 NSTTTNG----KGDKLTNGANSNKEEQMETNETKAKEEEIPPPELTTEEDAQTFRNLHKS 115
Query: 121 HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACA 180
V+G ++P P+ +F + RF +L NL + + EPTPIQ ++IP+ L++R+ ACA
Sbjct: 116 KVTGDDIPIPIGSFQDMIGRFHINKKVLSNLIDNEFIEPTPIQCESIPITLNNRDLIACA 175
Query: 181 PTGSGKTLAFLCPMLMKL 198
PTGSGKTLAFL P++ ++
Sbjct: 176 PTGSGKTLAFLIPLVQQI 193
>gi|156391217|ref|XP_001635665.1| predicted protein [Nematostella vectensis]
gi|156222761|gb|EDO43602.1| predicted protein [Nematostella vectensis]
Length = 777
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 54/137 (39%), Positives = 76/137 (55%), Gaps = 12/137 (8%)
Query: 61 KRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYN 119
KR++I + EG N K K DKE++ D KK L + ERD +FR+ +N
Sbjct: 285 KRRTIEEKEQEG-NRLKKEK------DKERKVAFDDRHWTKKNLEEMTERDWRIFREDFN 337
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I G +P P+R + + +L + +LGYK+PTPIQRQAIP+ L +R+
Sbjct: 338 ISTKGGRIPFPIRKWKEAQ----IPDSILEIVDKLGYKDPTPIQRQAIPIGLQNRDIIGV 393
Query: 180 APTGSGKTLAFLCPMLM 196
A TGSGKT AF P+L+
Sbjct: 394 AETGSGKTAAFAIPLLV 410
>gi|146420455|ref|XP_001486183.1| hypothetical protein PGUG_01854 [Meyerozyma guilliermondii ATCC
6260]
Length = 575
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 5/101 (4%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K+L RD +F++ ++I G N+P+PLR++ G + LL + +LGYKEPT
Sbjct: 119 KKLEDMTSRDWRIFKEDFSITCKGNNIPNPLRSW----KESGIPTTLLNTIDQLGYKEPT 174
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PIQR AIP L R+ A TGSGKTLAFL P+L L +
Sbjct: 175 PIQRAAIPTALGHRDVVGIAETGSGKTLAFLIPLLSYLSAI 215
>gi|226468232|emb|CAX69793.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Schistosoma japonicum]
Length = 606
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 47/123 (38%), Positives = 73/123 (59%), Gaps = 5/123 (4%)
Query: 80 KQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLS 138
K+L +E ++ D +K L + ERD +FR+ ++I G N+P+PLR++ +++
Sbjct: 123 KRLSGVAKREAKQKWDDRHWTEKALGQMTERDWRIFREDFSISTKGGNIPNPLRSWAEMN 182
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
L + ++GY EPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L +
Sbjct: 183 ----VADELKDVIKKVGYPEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLNWI 238
Query: 199 RVL 201
+ L
Sbjct: 239 QRL 241
>gi|71019395|ref|XP_759928.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
gi|46099583|gb|EAK84816.1| hypothetical protein UM03781.1 [Ustilago maydis 521]
Length = 568
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 65/102 (63%), Gaps = 5/102 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++K L++ +RD +FR+ + I G N+P PLR++ + G + +L + E
Sbjct: 229 DDKHWSEKSLSQMKDRDWRIFREDFGISARGGNIPKPLRSWRE----SGIPASILSTIEE 284
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+GYKEP+PIQRQAIP+ L +R+ A TGSGKT +FL P+L
Sbjct: 285 VGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLL 326
>gi|391342798|ref|XP_003745702.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Metaseiulus
occidentalis]
Length = 795
Score = 89.4 bits (220), Expect = 8e-16, Method: Composition-based stats.
Identities = 56/143 (39%), Positives = 81/143 (56%), Gaps = 9/143 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERD-A 112
+K+++ G+ +E + +Q + K K + E D ++K+L + ERD
Sbjct: 288 QKKEQSKFYGDLLESRRTNQEKEQEQARLQKLKNREEKQRWDDRHWSQKDLAEMTERDWR 347
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ YNI + G N+PSPLR + S S + L EL Y +PTPIQRQAIP+ L
Sbjct: 348 IFREDYNISIKGGNIPSPLRKW----SEAQLPSEITDILDELKYTDPTPIQRQAIPIGLQ 403
Query: 173 DRECFACAPTGSGKTLAFLCPML 195
+R+ A TGSGKTLAFL P+L
Sbjct: 404 NRDIIGVAETGSGKTLAFLFPLL 426
>gi|242022378|ref|XP_002431617.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
gi|212516925|gb|EEB18879.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28, putative
[Pediculus humanus corporis]
Length = 788
Score = 89.4 bits (220), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 65/108 (60%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++K L++ ERD +FR+ YNI + G +P P+R + + +L +
Sbjct: 322 DDRHWSEKALDEMTERDWRIFREDYNITIKGGKIPDPIRNWKEAK----IPQEILDIIER 377
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+GY E TPIQRQAIP+ L +R+ A TGSGKTLAFL P++M ++ L
Sbjct: 378 VGYTEATPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLIMWIQSL 425
>gi|170582680|ref|XP_001896237.1| CG10333-PA [Brugia malayi]
gi|158596582|gb|EDP34904.1| CG10333-PA, putative [Brugia malayi]
Length = 719
Score = 89.4 bits (220), Expect = 9e-16, Method: Composition-based stats.
Identities = 53/123 (43%), Positives = 74/123 (60%), Gaps = 7/123 (5%)
Query: 77 KSSKQLVPAVDKEKEKVE--DGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRT 133
K ++L A K+KEK E D +K L++ ERD +FR+ +NI + G VP PLR
Sbjct: 254 KQQEELRLAGVKKKEKKEAFDNRHWTQKSLDQMTERDWRIFREDFNISIKGGRVPKPLRN 313
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+ G + + + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P
Sbjct: 314 W----EEAGLPAEVFDVIMKIGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIP 369
Query: 194 MLM 196
+L+
Sbjct: 370 LLV 372
>gi|406601713|emb|CCH46674.1| ATP-dependent RNA helicase [Wickerhamomyces ciferrii]
Length = 588
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/119 (42%), Positives = 73/119 (61%), Gaps = 6/119 (5%)
Query: 81 QLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSS 139
+L+ K K+ +D AK L + RD + ++ Y I + G+N+P+PLR + + S
Sbjct: 134 ELISTRKKTKQNWDDIHWTAK-PLEQMKSRDWRILKEDYEIIIKGSNLPNPLRNWRE--S 190
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ E LL + +LGYKEPTPIQR +IP+ LS ++ A TGSGKTLA+L PML KL
Sbjct: 191 KIPLE--LLDIIHKLGYKEPTPIQRASIPISLSKKDIIGIAETGSGKTLAYLIPMLSKL 247
>gi|403215476|emb|CCK69975.1| hypothetical protein KNAG_0D02250 [Kazachstania naganishii CBS
8797]
Length = 560
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 79/135 (58%), Gaps = 12/135 (8%)
Query: 76 FKSSKQLVPAVDKEKEK--VEDGPSKAKKELN----------KQIERDAVFRKKYNIHVS 123
F +K+++ V+ EK+ VE+ KA+ + K E+ RK Y +V+
Sbjct: 49 FFHNKKIIHDVENEKKHADVEETSEKAETDDTSSSLVVEPRIKTKEQAHQLRKSYQGNVT 108
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G +V P+ +F L +RF + LL NL E + EPTPIQ ++IP+ L++R+ AC PTG
Sbjct: 109 GEDVCLPIGSFEDLITRFSFDKRLLNNLVENHFTEPTPIQCESIPLALNNRDILACGPTG 168
Query: 184 SGKTLAFLCPMLMKL 198
SGKTLAFL P++ ++
Sbjct: 169 SGKTLAFLVPLVQQV 183
>gi|402224639|gb|EJU04701.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dacryopinax sp. DJM-731 SS1]
Length = 589
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 60/189 (31%), Positives = 91/189 (48%), Gaps = 9/189 (4%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGET 69
G FDK++F + F +K+ S TD + F K + + G
Sbjct: 10 GGTQFDKRRFNKEVNLFSGHKKHAETVASTSHT----TDEFPEELDFFKYAE-SGVLGTK 64
Query: 70 VEGFNVFKS----SKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGA 125
EG KS S++ V + + +G +K + + +E + + +G
Sbjct: 65 GEGAANGKSRAADSERTVGVERQSQGSGWEGSAKRGTKRKRSLEPERTITSARRVRCTGE 124
Query: 126 NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
+VP+P+ +FV L R+G L +N+AE GY PT +Q Q IPVLL R+ A APTGSG
Sbjct: 125 SVPTPIHSFVSLQDRYGLAPELRKNIAEKGYLTPTDVQTQCIPVLLEKRDLAAIAPTGSG 184
Query: 186 KTLAFLCPM 194
KTLA+L P+
Sbjct: 185 KTLAYLLPV 193
>gi|390363556|ref|XP_001186136.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like
[Strongylocentrotus purpuratus]
Length = 97
Score = 88.6 bits (218), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 61/94 (64%), Gaps = 5/94 (5%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
+RD +FR+ +NI G ++P P+R + +G ++ +AE+GYK+P+PIQRQAI
Sbjct: 3 DRDWRIFREDFNISTKGGHIPHPIRFW----DEYGLPKHITDIIAEVGYKDPSPIQRQAI 58
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 59 PIGLQNRDVIGVAETGSGKTAAFLIPLLVWITTL 92
>gi|143456125|sp|Q0J7Y8.2|RH45_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 45
Length = 947
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +RK + V G +VP P++T+V+ G S LL + +LG+++P PIQ QA+P+++
Sbjct: 265 ATYRKNLELKVHGKDVPKPIKTWVQ----SGLTSKLLDTIKKLGFEKPMPIQAQALPIIM 320
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAF+ PML ++
Sbjct: 321 SGRDCIGIAKTGSGKTLAFVLPMLRHVK 348
>gi|198426131|ref|XP_002127349.1| PREDICTED: similar to Ddx52 protein [Ciona intestinalis]
Length = 538
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 1/112 (0%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
K K K ++ ++ ++ K + RK+ I V G +VP + F +L +FG S
Sbjct: 43 KPKRKKDENDTENDQQNEKSDDTKVNLRKQMRIFVQGTDVPDLVENFNQLEEKFGVHSIC 102
Query: 148 LRNLAE-LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
++NL E G+ +PIQ QAIP +L RE ACAPTGSGKTLAFL P++ L
Sbjct: 103 VKNLTERFGFSALSPIQMQAIPAMLDGREILACAPTGSGKTLAFLVPVVSHL 154
>gi|432113951|gb|ELK36016.1| Putative ATP-dependent RNA helicase DDX23 [Myotis davidii]
Length = 301
Score = 88.2 bits (217), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 68/108 (62%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++++L++ +RD +FR+ Y+I G +P+P+R++ S ++L + +
Sbjct: 133 DDRHWSQEKLDEMTDRDWRIFREDYSITTKGGKIPNPIRSWKDSS----LPPHILEVIDK 188
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 189 CGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 236
>gi|242080665|ref|XP_002445101.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
gi|241941451|gb|EES14596.1| hypothetical protein SORBIDRAFT_07g004090 [Sorghum bicolor]
Length = 1062
Score = 87.8 bits (216), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K+++K + V +RK + V G +VP P++T+V+ G S LL + +LG+++P
Sbjct: 406 KDISKMTSEEVVEYRKHLELKVHGKDVPKPIKTWVQ----SGLTSKLLDTIKKLGFEKPM 461
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 462 PIQTQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVK 500
>gi|328868659|gb|EGG17037.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 834
Score = 87.8 bits (216), Expect = 2e-15, Method: Composition-based stats.
Identities = 49/124 (39%), Positives = 79/124 (63%), Gaps = 11/124 (8%)
Query: 76 FKSSKQLVPAVDKEKEKVEDGPSK--AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLR 132
F+S+ + +P+ + EK D PS +KK+L +RD +F++ +NI G ++P+P+R
Sbjct: 354 FESTSRRLPSGEPEK----DVPSTHWSKKDLRSMTDRDWRIFKEDFNISTKGGSIPNPIR 409
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
T+ + S + +L +A+ GY++P+P+Q QAIPV LS R+ A TGSGKT AF+
Sbjct: 410 TWRESS----LPADMLEAIAKQGYEKPSPVQMQAIPVALSGRDVLGIAETGSGKTAAFVI 465
Query: 193 PMLM 196
PML+
Sbjct: 466 PMLV 469
>gi|157134089|ref|XP_001663141.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108870607|gb|EAT34832.1| AAEL012962-PA [Aedes aegypti]
Length = 591
Score = 87.8 bits (216), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 38/73 (52%), Positives = 50/73 (68%)
Query: 127 VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGK 186
VP P+ F +L+ RF + L++N+ + GYK PTP+Q QAIPVLL ACAPTGSGK
Sbjct: 131 VPDPIEQFRELAERFNVSNQLIKNIEDCGYKAPTPVQMQAIPVLLEGHPVHACAPTGSGK 190
Query: 187 TLAFLCPMLMKLR 199
T AFL P++ L+
Sbjct: 191 TAAFLIPIIHHLQ 203
>gi|196001667|ref|XP_002110701.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
gi|190586652|gb|EDV26705.1| hypothetical protein TRIADDRAFT_50105 [Trichoplax adhaerens]
Length = 722
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 49/111 (44%), Positives = 68/111 (61%), Gaps = 5/111 (4%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
+KEK D +K+L++ ERD +FR+ YNI G ++P+PLR + S
Sbjct: 247 NKEKRVAYDERHWTQKDLDEMTERDWRIFREDYNISTKGGSIPNPLRAW----SESELSK 302
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL +++L Y EPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 303 ELLDIISDLKYNEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLV 353
>gi|126275853|ref|XP_001386913.1| predicted protein [Scheffersomyces stipitis CBS 6054]
gi|146325686|sp|A3GHW9.1|ROK1_PICST RecName: Full=ATP-dependent RNA helicase ROK1
gi|126212782|gb|EAZ62890.1| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 558
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 60/95 (63%)
Query: 106 KQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
+ +E RK + V+G ++P P+ +F + RF +S LL NL E + EPT IQ +
Sbjct: 90 QTVEDSIKLRKANHSKVTGEDIPLPIGSFQDMIGRFRLDSKLLSNLLEAEFVEPTAIQCE 149
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
++P+ LS R+ ACAPTGSGKTLAFL P++ L V
Sbjct: 150 SLPISLSGRDLIACAPTGSGKTLAFLIPLIQSLLV 184
>gi|193632062|ref|XP_001950933.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Acyrthosiphon pisum]
Length = 528
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/129 (40%), Positives = 67/129 (51%), Gaps = 13/129 (10%)
Query: 70 VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPS 129
++ F++FK K V A K+ EK+ P E D K+ + G VP
Sbjct: 1 MDSFDIFK--KLSVGAKFKKPEKIAIHP-----------EDDKSTAKQIKVKTVGDRVPE 47
Query: 130 PLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLA 189
L TF + + L+ NL GY PTPIQ QAIPV+L R+ FACAPTGSGKT A
Sbjct: 48 ALSTFDMMKEAYSLSPVLMENLKNSGYTVPTPIQTQAIPVMLQKRQIFACAPTGSGKTAA 107
Query: 190 FLCPMLMKL 198
FL P++ L
Sbjct: 108 FLVPIIHHL 116
>gi|68490782|ref|XP_710786.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|68490809|ref|XP_710773.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432016|gb|EAK91525.1| potential DEAD box RNA helicase [Candida albicans SC5314]
gi|46432030|gb|EAK91538.1| potential DEAD box RNA helicase [Candida albicans SC5314]
Length = 496
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 60/91 (65%), Gaps = 1/91 (1%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA FR + V+G ++P P+ +F + RF +L NL + + EPTPIQ ++I
Sbjct: 21 EEDAQTFRNLHKSKVTGDDIPIPIGSFQDMIGRFHINKKVLSNLIDNEFVEPTPIQCESI 80
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+ L++R+ ACAPTGSGKTLAFL P++ ++
Sbjct: 81 PITLNNRDLIACAPTGSGKTLAFLIPLVQQI 111
>gi|157121045|ref|XP_001653747.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|108882993|gb|EAT47218.1| AAEL001657-PA [Aedes aegypti]
Length = 814
Score = 87.4 bits (215), Expect = 3e-15, Method: Composition-based stats.
Identities = 46/103 (44%), Positives = 68/103 (66%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+ ++ ERD +FR+ YNI + G +P+P R++ S G +L + ++GYKE
Sbjct: 353 SEKDCDEMTERDWRIFREDYNITIKGGKIPNPFRSW----SETGFPKEILDIIDKVGYKE 408
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 409 PTPIQRQAIPIGLQNRDIIGIAETGSGKTLAFLIPLLTWIQSL 451
>gi|325180080|emb|CCA14481.1| DEAD/DEAH box RNA helicase putative [Albugo laibachii Nc14]
Length = 594
Score = 87.4 bits (215), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 68/112 (60%), Gaps = 11/112 (9%)
Query: 98 SKAKKELNKQIERD------AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE-----SY 146
S +K E+N + +R+ A+FR++ I V G+ VP+P+ TF + S + S
Sbjct: 118 STSKPEINTKKQREDEQASIALFRRQMGIRVEGSYVPNPIETFENIPSGQNDKEKHFRSI 177
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+L N+ YK+PT IQ QAIP +L+ R+ APTGSGKT AFL P+LM+L
Sbjct: 178 ILHNIEASEYKDPTAIQMQAIPSMLAGRDVLGTAPTGSGKTAAFLIPILMRL 229
>gi|195579916|ref|XP_002079802.1| GD24145 [Drosophila simulans]
gi|194191811|gb|EDX05387.1| GD24145 [Drosophila simulans]
Length = 641
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++KE ++ ERD +FR+ YN+ + G +P+P+R++ + G
Sbjct: 168 KEDKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----NESGFPKE 223
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 224 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 278
>gi|16768302|gb|AAL28370.1| GM01081p [Drosophila melanogaster]
Length = 641
Score = 87.4 bits (215), Expect = 4e-15, Method: Composition-based stats.
Identities = 47/115 (40%), Positives = 74/115 (64%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++KE ++ ERD +FR+ YN+ + G +P+P+R++ + G
Sbjct: 168 KEDKQKWDDRHWSEKENDEMTERDWRIFREDYNVTIKGGRIPNPIRSW----NESGFPKE 223
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ + ++GYKEPTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 224 IIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLSWIQSL 278
>gi|328771766|gb|EGF81805.1| hypothetical protein BATDEDRAFT_16042 [Batrachochytrium
dendrobatidis JAM81]
Length = 584
Score = 87.0 bits (214), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 67/99 (67%), Gaps = 9/99 (9%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE--SYLLRNLAELGY 156
++K+L++ +RD +F++ ++I G N+P+PLRT+ + CE +L ++ +GY
Sbjct: 128 SEKKLSEMKDRDWRIFKEDFSISTKGGNIPNPLRTWDE------CELSETILGAISRIGY 181
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
KEPTPIQRQAIP+ L +R+ A TGSGKT +F+ PML
Sbjct: 182 KEPTPIQRQAIPMGLQNRDIIGIAETGSGKTASFVIPML 220
>gi|170029482|ref|XP_001842621.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
gi|167863205|gb|EDS26588.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Culex
quinquefasciatus]
Length = 815
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++KE+++ ERD +FR+ YN+ + G +P+P+R++ G +L + ++GYKE
Sbjct: 354 SEKEVDEMTERDWRIFREDYNVTIKGGKIPNPIRSW----KESGFPKEVLEIIDKVGYKE 409
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L
Sbjct: 410 PTPIQRQAIPIGLQNRDIIGIAETGSGKTLAFLIPLL 446
>gi|170040294|ref|XP_001847939.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
gi|167863866|gb|EDS27249.1| DEAD box ATP-dependent RNA helicase [Culex quinquefasciatus]
Length = 818
Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++KE+++ ERD +FR+ YN+ + G +P+P+R++ G +L + ++GYKE
Sbjct: 357 SEKEVDEMTERDWRIFREDYNVTIKGGKIPNPIRSW----KESGFPKEVLEIIDKVGYKE 412
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L
Sbjct: 413 PTPIQRQAIPIGLQNRDIIGIAETGSGKTLAFLIPLL 449
>gi|448525693|ref|XP_003869174.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis Co
90-125]
gi|380353527|emb|CCG23037.1| Chr1 DEAD-box ATP-dependent RNA helicase [Candida orthopsilosis]
Length = 547
Score = 86.7 bits (213), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 55/145 (37%), Positives = 80/145 (55%), Gaps = 5/145 (3%)
Query: 58 KKRKRKSIAGET---VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAV- 113
+K K +SI + + F+ K +KQ VP + E E E L + E DA
Sbjct: 34 QKHKEESILNQVEKETDFFHTRKHTKQ-VPEKEVELESPEQQKEDEAPPLELKDEDDAKK 92
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR + V+G ++P P+ +F + RF + LL NL + + PT IQ ++IP+ LS
Sbjct: 93 FRNLHRSKVTGDDIPIPIGSFEDMIGRFKIDRQLLSNLIDNDFIGPTAIQCESIPITLSS 152
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACAPTGSGKTLAFL P++ +L
Sbjct: 153 RDLIACAPTGSGKTLAFLIPLIQQL 177
>gi|307181491|gb|EFN69083.1| Probable ATP-dependent RNA helicase DDX23 [Camponotus floridanus]
Length = 669
Score = 86.7 bits (213), Expect = 5e-15, Method: Composition-based stats.
Identities = 55/144 (38%), Positives = 80/144 (55%), Gaps = 9/144 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERD-A 112
+KR + GE +E +Q + K K K E D ++K LN+ ERD
Sbjct: 162 QKRDQSKFYGELLEKRRTEAEKEQEKMRLKKVKRKEEKQKWDDRHWSEKALNEMTERDWR 221
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ YNI + G +P P+R++ G +L + ++GYK+ TPIQRQAIP+ L
Sbjct: 222 IFREDYNITIKGGRIPDPIRSW----KESGFPKEILDIIDKVGYKDLTPIQRQAIPIGLQ 277
Query: 173 DRECFACAPTGSGKTLAFLCPMLM 196
+R+ A TGSGKTLAFL P+L+
Sbjct: 278 NRDIIGVAETGSGKTLAFLIPLLL 301
>gi|152060505|sp|A5DIX5.2|ROK1_PICGU RecName: Full=ATP-dependent RNA helicase ROK1
Length = 537
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 109 ERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA RK+ ++VSG ++P P+ +F L +R LL NL GY EPT IQ +AI
Sbjct: 78 EEDAAKLRKQNKVNVSGTDIPLPIGSFEDLIARCNLNRKLLANLIASGYSEPTAIQCEAI 137
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P R+ ACAPTGSGKTLA+L PM L
Sbjct: 138 PASAEGRDLIACAPTGSGKTLAYLIPMAQAL 168
>gi|428174311|gb|EKX43208.1| hypothetical protein GUITHDRAFT_158075 [Guillardia theta CCMP2712]
Length = 464
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 43/88 (48%), Positives = 57/88 (64%), Gaps = 5/88 (5%)
Query: 114 FRKKYNIHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
FR++ I VSG + P+ TF +KLS + +LL + G+KEPTPIQ QAIP+LL
Sbjct: 16 FRRQMGITVSGDEIAPPIGTFSEIKLSKE---QKWLLHGIETAGWKEPTPIQMQAIPILL 72
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ ACAPTGSGKT AF+ P+ L+
Sbjct: 73 ERRDLVACAPTGSGKTGAFVIPLFALLQ 100
>gi|355564184|gb|EHH20684.1| Putative ATP-dependent RNA helicase DDX23 [Macaca mulatta]
Length = 820
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 71/115 (61%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K+L++ +RD +F + Y+I G +P+P+R++ S +
Sbjct: 346 KEAKQRWDDRHWSQKKLDEMTDRDWRIFCEDYSITTKGGKIPNPIRSWKDSS----LPPH 401
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 402 ILEVIDKCGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLLVWITTL 456
>gi|254582647|ref|XP_002499055.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
gi|238942629|emb|CAR30800.1| ZYRO0E02530p [Zygosaccharomyces rouxii]
Length = 556
Score = 86.7 bits (213), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 40/85 (47%), Positives = 56/85 (65%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK Y ++SG ++ P+ +F L SRF + LL NL + + EPTPIQ + IP+ L
Sbjct: 98 LRKSYKGNISGNDLIFPIGSFEDLISRFSFDKRLLNNLIDNDFTEPTPIQCEGIPLALHG 157
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ +CAPTGSGKTLAFL P+L ++
Sbjct: 158 RDLLSCAPTGSGKTLAFLIPLLQQI 182
>gi|312375100|gb|EFR22532.1| hypothetical protein AND_15065 [Anopheles darlingi]
Length = 821
Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/103 (42%), Positives = 70/103 (67%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K++++ ERD +FR+ YNI + G +P+P+R +++ G +L + ++GYK+
Sbjct: 360 SEKDVDEMTERDWRIFREDYNITIKGGKIPNPIRNWIE----SGFPKEILEIIDKVGYKD 415
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQRQAIP+ L +R+ A TGSGKTLAFL P+L ++ L
Sbjct: 416 PTPIQRQAIPIGLQNRDIIGIAETGSGKTLAFLIPLLTWIQSL 458
>gi|238878350|gb|EEQ41988.1| ATP-dependent RNA helicase ROK1 [Candida albicans WO-1]
Length = 640
Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 66/197 (33%), Positives = 100/197 (50%), Gaps = 16/197 (8%)
Query: 8 LFAGVSFDKKK-FVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIA 66
L G S +KKK TD+A E + + S + + + + F RK S
Sbjct: 69 LSRGASLNKKKGITTDYALPSEKQTQKQKHKQESLLNEVERETD-----FFHTRKHNS-N 122
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL----NKQIERDA-VFRKKYNIH 121
T G K K A ++E++E +KAK+E E DA FR +
Sbjct: 123 STTTSG----KGDKLTNGANSNKEEQMETNETKAKEEEIPPPELTTEEDAQTFRNLHKSK 178
Query: 122 VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAP 181
V+G ++P P+ +F + RF +L NL + + EPTPIQ ++IP+ L++R+ ACAP
Sbjct: 179 VTGDDIPIPIGSFQDMIGRFHINKKVLSNLIDNEFVEPTPIQCESIPITLNNRDLIACAP 238
Query: 182 TGSGKTLAFLCPMLMKL 198
TGSGKTLAFL P++ ++
Sbjct: 239 TGSGKTLAFLIPLVQQI 255
>gi|405972018|gb|EKC36815.1| Putative ATP-dependent RNA helicase DDX23 [Crassostrea gigas]
Length = 778
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D ++K L++ ERD +F++ YNI G +P+P+R++ + +
Sbjct: 302 KEAKQKWDDRHWSEKNLDEMAERDWRIFKEDYNISCKGGRIPNPIRSWRESGL---LQKE 358
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+L + GYKEPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L
Sbjct: 359 ILEVIEIAGYKEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLFPLL 407
>gi|343424844|emb|CBQ68382.1| probable U5 snRNP 100 kD protein [Sporisorium reilianum SRZ2]
Length = 683
Score = 86.3 bits (212), Expect = 7e-15, Method: Composition-based stats.
Identities = 44/95 (46%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L + ERD +FR+ + I G N+P PLR++ + S + +L +AE+GYKEP+
Sbjct: 225 KTLAQMKERDWRIFREDFGISARGGNIPKPLRSWRESS----IPASILSTIAEIGYKEPS 280
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PIQRQAIP+ L +R+ A TGSGKT +FL P+L
Sbjct: 281 PIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLL 315
>gi|384247417|gb|EIE20904.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Coccomyxa subellipsoidea C-169]
Length = 378
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 59/86 (68%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
RK++ I+V G ++P+PL+ F + + LL N+ E G+ PTPIQRQA+P+LL R
Sbjct: 1 RKQHRIYVKGTDIPAPLKEFSDVCKKRKFYKKLLANIEESGFLAPTPIQRQAVPLLLKKR 60
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLRV 200
E APTGSGKTLA+L P++++ ++
Sbjct: 61 EVLCVAPTGSGKTLAYLLPIIIQAKL 86
>gi|363756464|ref|XP_003648448.1| hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891648|gb|AET41631.1| Hypothetical protein Ecym_8358 [Eremothecium cymbalariae
DBVPG#7215]
Length = 569
Score = 86.3 bits (212), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 60/90 (66%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E A RK Y +VSG ++P P+ +F L +RF + LL N+ + + PTPIQ +AI
Sbjct: 89 EDAAKLRKCYKGNVSGPDIPLPIGSFEDLITRFELDKRLLNNMIQNYFTNPTPIQCEAIS 148
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ L++R+ ACAPTGSGKTLAFL P++ ++
Sbjct: 149 MCLNERDIIACAPTGSGKTLAFLIPLIQQV 178
>gi|344302192|gb|EGW32497.1| ATP-dependent RNA helicase ROK1 [Spathaspora passalidarum NRRL
Y-27907]
Length = 546
Score = 86.3 bits (212), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 42/91 (46%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 109 ERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA FRK + V+G ++P P+ +F + RF + LL NL + EPT IQ ++I
Sbjct: 86 EEDAQKFRKSHKSKVTGDDIPLPIGSFQDMIGRFNIDKKLLTNLLAAEFVEPTAIQCESI 145
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LS+R+ ACAPTGSGKTLAFL P++ K+
Sbjct: 146 AISLSNRDLIACAPTGSGKTLAFLIPLIQKI 176
>gi|410900007|ref|XP_003963488.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Takifugu
rubripes]
Length = 802
Score = 86.3 bits (212), Expect = 8e-15, Method: Composition-based stats.
Identities = 51/149 (34%), Positives = 84/149 (56%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 293 QKREQSRFYGDLMEKRRTLEEKEQEETRLKKMRKKEAKQRWDDRHWSQKKLDEMTDRDWR 352
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R + + ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 353 IFREDYSITTKGGKIPNPIRNW----KEYSLPDHILEVIDKCGYKEPTPIQRQAIPIGLQ 408
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 409 NRDIIGVAETGSGKTAAFLIPLLVWITTL 437
>gi|71021341|ref|XP_760901.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
gi|46100997|gb|EAK86230.1| hypothetical protein UM04754.1 [Ustilago maydis 521]
Length = 1448
Score = 85.9 bits (211), Expect = 8e-15, Method: Composition-based stats.
Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 28/218 (12%)
Query: 10 AGVSFDKKKFVTDFARF--KENKESENLADDFSFVEGEKTDPEKAMV--SFVKKRKRKSI 65
G FDKK+F D F ++++ L + + ++ S V K
Sbjct: 840 GGARFDKKRFQNDLKIFGGAADEQASTLTPSSAASSSNVSGSKRKRTDGSAVAGNDGKGA 899
Query: 66 AGETV---EGFNVFKS---SKQLVPAVDKE-KEKVEDGPSKAKKELNKQIERDAV----- 113
+G V +G + F S +K A ++E ++ +DG KA ++L ++ D
Sbjct: 900 SGAKVIVPDGLDFFGSAAKTKSTTSAAEREERQSRKDGKRKADEKLGSDMDDDDEEERHT 959
Query: 114 ------------FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
F K I + G +VP P+ ++ +L +RF S+L NL + G+ PT
Sbjct: 960 DEAPVTKASLSGFLKLNKIKLKGTDVPLPMASWSELEARFNVASWLRTNLEKCGWAVPTA 1019
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
IQ+ +PVLL++R+ A APTGSGKTLAFL P++ LR
Sbjct: 1020 IQKGTMPVLLANRDLLAGAPTGSGKTLAFLLPLIHHLR 1057
>gi|449525702|ref|XP_004169855.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
42-like [Cucumis sativus]
Length = 1098
Score = 85.9 bits (211), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQ-IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+++ +E A +RK+ + + G +VP P++T+ + G S +L + +L Y++P
Sbjct: 441 KEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTW----HQTGLTSKILETIKKLNYEKPM 496
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 497 PIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 535
>gi|255578793|ref|XP_002530253.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223530219|gb|EEF32123.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 1173
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +RK+ + + G +VP P++T+ + G S +L + +L Y++P PIQ QA+P+++
Sbjct: 507 AAYRKQLELKIHGKDVPKPVKTW----HQTGLASKILETIKKLNYEKPMPIQAQALPIIM 562
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAF+ PML ++
Sbjct: 563 SGRDCIGIAKTGSGKTLAFVLPMLRHIK 590
>gi|367020544|ref|XP_003659557.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
gi|347006824|gb|AEO54312.1| hypothetical protein MYCTH_2296766 [Myceliophthora thermophila ATCC
42464]
Length = 993
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 59/170 (34%), Positives = 91/170 (53%), Gaps = 33/170 (19%)
Query: 37 DDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDG 96
DDF + E ++ DP A+++ K+KRK I P +D K +E
Sbjct: 279 DDFGY-EADQADP-AAILAMAAKKKRKDI------------------PTIDYSK--IELN 316
Query: 97 PSKAK-----KELNKQIERDAV-FRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLR 149
P + +EL++ E +A R + + I VSG NVP P++ + S+ G +L
Sbjct: 317 PIRKNFWVEPQELSQMTEEEAAELRMELDGIKVSGKNVPKPVQKW----SQCGLTRPILD 372
Query: 150 NLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ LGY++PTPIQ QA+PV++S R+ A TGSGKT+AF+ PML ++
Sbjct: 373 VIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIK 422
>gi|115474897|ref|NP_001061045.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|75328149|sp|Q84UQ1.1|RH42_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|29467560|dbj|BAC66730.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|37806159|dbj|BAC99664.1| putative RNA helicase [Oryza sativa Japonica Group]
gi|113623014|dbj|BAF22959.1| Os08g0159900 [Oryza sativa Japonica Group]
gi|218200507|gb|EEC82934.1| hypothetical protein OsI_27901 [Oryza sativa Indica Group]
gi|222639953|gb|EEE68085.1| hypothetical protein OsJ_26125 [Oryza sativa Japonica Group]
Length = 1049
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 59/88 (67%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +RK+ + V G +VP P++T+V+ G S LL + +LG+++P IQ QA+P+++
Sbjct: 404 AAYRKQLELKVHGKDVPKPIKTWVQ----SGLTSKLLDTIKKLGFEKPMSIQAQALPIIM 459
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAF+ PML ++
Sbjct: 460 SGRDCIGIAKTGSGKTLAFVLPMLRHVK 487
>gi|449439147|ref|XP_004137349.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 1
[Cucumis sativus]
Length = 1118
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQ-IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+++ +E A +RK+ + + G +VP P++T+ + G S +L + +L Y++P
Sbjct: 441 KEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTW----HQTGLTSKILETIKKLNYEKPM 496
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 497 PIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 535
>gi|291225666|ref|XP_002732826.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 23-like
[Saccoglossus kowalevskii]
Length = 768
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 44/103 (42%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + + ERD +FR+ YNI G +P P+R++ + G Y++ + +GYKE
Sbjct: 306 SQKTIEEMQERDWRIFREDYNIATKGGRIPLPIRSWTEA----GLPDYIIDVIDSMGYKE 361
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 362 PTPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLIPLLVWISSL 404
>gi|449439149|ref|XP_004137350.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like isoform 2
[Cucumis sativus]
Length = 1040
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQ-IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+++ +E A +RK+ + + G +VP P++T+ + G S +L + +L Y++P
Sbjct: 363 KEISRMTLEEVAAYRKQLELKIHGKDVPKPVKTW----HQTGLTSKILETIKKLNYEKPM 418
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 419 PIQAQALPIVMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 457
>gi|256088378|ref|XP_002580316.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230182|emb|CCD76353.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 730
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 77 KSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFV 135
+ K+L +E ++ D +K L++ ERD +FR+ +NI G N+P+PLR++
Sbjct: 244 QEKKRLSGVAKREAKQKWDDRHWTEKALDQMTERDWRIFREDFNISTKGGNIPNPLRSWA 303
Query: 136 KLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+++ L + ++GY EPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L
Sbjct: 304 EMN----VADELKDVIKKVGYPEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL 359
>gi|146419062|ref|XP_001485496.1| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 109 ERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA RK+ ++VSG ++P P+ +F L +R LL NL GY EPT IQ +AI
Sbjct: 217 EEDAAKLRKQNKVNVSGTDIPLPIGSFEDLIARCNLNRKLLANLIASGYSEPTAIQCEAI 276
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P R+ ACAPTGSGKTLA+L PM L
Sbjct: 277 PASAEGRDLIACAPTGSGKTLAYLIPMAQAL 307
>gi|256088376|ref|XP_002580315.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|353230183|emb|CCD76354.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 793
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 72/120 (60%), Gaps = 5/120 (4%)
Query: 77 KSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFV 135
+ K+L +E ++ D +K L++ ERD +FR+ +NI G N+P+PLR++
Sbjct: 307 QEKKRLSGVAKREAKQKWDDRHWTEKALDQMTERDWRIFREDFNISTKGGNIPNPLRSWA 366
Query: 136 KLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+++ L + ++GY EPTPIQRQAIP+ L +R+ A TGSGKT AFL P+L
Sbjct: 367 EMN----VADELKDVIKKVGYPEPTPIQRQAIPIGLQNRDIIGVAETGSGKTAAFLIPLL 422
>gi|190346939|gb|EDK39127.2| hypothetical protein PGUG_03226 [Meyerozyma guilliermondii ATCC
6260]
Length = 676
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/91 (48%), Positives = 55/91 (60%), Gaps = 1/91 (1%)
Query: 109 ERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA RK+ ++VSG ++P P+ +F L +R LL NL GY EPT IQ +AI
Sbjct: 217 EEDAAKLRKQNKVNVSGTDIPLPIGSFEDLIARCNLNRKLLANLIASGYSEPTAIQCEAI 276
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P R+ ACAPTGSGKTLA+L PM L
Sbjct: 277 PASAEGRDLIACAPTGSGKTLAYLIPMAQAL 307
>gi|340059591|emb|CCC53980.1| putative ATP-dependent DEAD/H RNA helicase, fragment, partial
[Trypanosoma vivax Y486]
Length = 504
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 43/85 (50%), Positives = 54/85 (63%), Gaps = 1/85 (1%)
Query: 116 KKYNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
KK + VSG +VP P+ F L ++ L+ NL E ++ PTPIQ QAIP L+ R
Sbjct: 105 KKNELEVSGIDVPQPIEHFSDLVRPPLSLDTRLVSNLFERKHRVPTPIQMQAIPCLVQGR 164
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLR 199
+ ACAPTGSGKTLAFL PM +LR
Sbjct: 165 DVLACAPTGSGKTLAFLVPMFARLR 189
>gi|241950191|ref|XP_002417818.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
gi|223641156|emb|CAX45533.1| ATP-dependent DEAD-box RNA helicase, putative [Candida dubliniensis
CD36]
Length = 563
Score = 85.5 bits (210), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 59/91 (64%), Gaps = 1/91 (1%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E DA FR + V+G ++P P+ +F + RF +L NL E + EPT IQ ++I
Sbjct: 97 EEDAQTFRNLHKSKVTGDDIPIPIGSFQDMIGRFHINKKVLSNLIENEFIEPTTIQCESI 156
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+ L++R+ ACAPTGSGKTLAFL P++ ++
Sbjct: 157 PITLNNRDLIACAPTGSGKTLAFLIPLVQQI 187
>gi|198474199|ref|XP_001356589.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
gi|198138291|gb|EAL33653.2| GA10248 [Drosophila pseudoobscura pseudoobscura]
Length = 828
Score = 85.5 bits (210), Expect = 1e-14, Method: Composition-based stats.
Identities = 54/149 (36%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERD-A 112
+KR + G+ +E +Q + K K K E D ++K+ ++ ERD
Sbjct: 321 QKRTQSQFYGDLLEKRRTEAEKEQEKVRLKKMKRKEEKQKWDDRHWSEKDNDEMTERDWR 380
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ YNI + G +P+P+R++ + G ++ + ++GYKEPTPIQRQAIP+ L
Sbjct: 381 IFREDYNITIKGGRIPNPIRSW----NESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQ 436
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKTLAFL P+L ++ L
Sbjct: 437 NRDIIGVAETGSGKTLAFLIPLLSWIQSL 465
>gi|268572017|ref|XP_002641212.1| Hypothetical protein CBG09074 [Caenorhabditis briggsae]
Length = 732
Score = 85.1 bits (209), Expect = 1e-14, Method: Composition-based stats.
Identities = 48/96 (50%), Positives = 64/96 (66%), Gaps = 5/96 (5%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KEL++ +RD +FR+ +NI + G VP PLR + + S F E Y R + E+GY EPT
Sbjct: 272 KELSEMTDRDWRIFREDFNISIKGGKVPRPLRNWEE--SGFPDEVY--RAVQEIGYLEPT 327
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PIQRQAIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 328 PIQRQAIPIGLQNRDVIGVAETGSGKTAAFLLPLLV 363
>gi|71420983|ref|XP_811671.1| RNA helicase [Trypanosoma cruzi strain CL Brener]
gi|70876358|gb|EAN89820.1| RNA helicase, putative [Trypanosoma cruzi]
Length = 553
Score = 85.1 bits (209), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTD---------PEKAMVSFVK 58
L G FD KK RF EN D F G T P + + F +
Sbjct: 7 LTTGTKFDVKKHGAAMKRFT----PENTKLDHPFAPGNSTPICDIMEVPMPNRTLNIFGR 62
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL-NKQIERDAVFRKK 117
R AG T EG + + K +E + + + + + I++ KK
Sbjct: 63 SRS----AG-TSEGAGLLEG---------KAQEDIRNNATTTHTPVKSMSIKKKRNLWKK 108
Query: 118 YNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
+ V G +VP P++ F +L + L+ NL E ++ PTPIQ QAIP L++ R+
Sbjct: 109 NELEVEGVDVPQPIQHFSELVRPPLSVDERLVSNLFERNHRIPTPIQMQAIPCLINKRDV 168
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKTL+FL PM L+
Sbjct: 169 LACAPTGSGKTLSFLIPMFHILK 191
>gi|119500728|ref|XP_001267121.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
gi|143359899|sp|A1CX72.1|PRP28_NEOFI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119415286|gb|EAW25224.1| DEAD/DEAH box helicase, putative [Neosartorya fischeri NRRL 181]
Length = 796
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G LL + ++GYKE
Sbjct: 331 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW----EESGLPKRLLELVDQVGYKE 386
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQR AIP+ L R+ A TGSGKT +FL P+L+ + L
Sbjct: 387 PTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISEL 429
>gi|270003649|gb|EFA00097.1| hypothetical protein TcasGA2_TC002912 [Tribolium castaneum]
Length = 557
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R I V G VP P++TF L+ + ++ N+ + GY EPTP+Q+QA+P++L
Sbjct: 97 YRNLNKISVVGKRVPEPVKTFDDLN----VDPIIINNVKKCGYIEPTPVQKQAVPIMLEG 152
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R ACAPTGSGKT AFL P+L L+
Sbjct: 153 RNLLACAPTGSGKTAAFLIPILHDLK 178
>gi|119578414|gb|EAW58010.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23, isoform CRA_a [Homo
sapiens]
Length = 634
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 52/149 (34%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 126 QKREQSRFYGDLMEKRRTLEEKEQEEARLRKLRKKEAKQRWDDRHWSQKKLDEMTDRDWR 185
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R++ S ++L + + GYKEPTPIQRQAIP+ L
Sbjct: 186 IFREDYSITTKGGKIPNPIRSWKDSS----LPPHILEVIDKCGYKEPTPIQRQAIPIGLQ 241
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 242 NRDIIGVAETGSGKTAAFLIPLLVWITTL 270
>gi|256079519|ref|XP_002576034.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 10/91 (10%)
Query: 114 FRKKYNIHVSGAN----VPSPLRTFVKLSSRFGCE--SYLLRNLAELGYKEPTPIQRQAI 167
+R ++I VS N +P P+ +F S+F C+ +L NL+ELGYK PTPIQ Q+I
Sbjct: 35 YRLSHDIKVSAINRQSKIPPPIYSFW---SKF-CQISDLILHNLSELGYKTPTPIQSQSI 90
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+++ R ACAPTGSGKT A+L P+L +L
Sbjct: 91 PIMMQHRNLLACAPTGSGKTAAYLLPVLNQL 121
>gi|115454875|ref|NP_001051038.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|75320262|sp|Q53RK8.1|RH21_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|62733557|gb|AAX95674.1| DEAD/DEAH box helicase, putative [Oryza sativa Japonica Group]
gi|108710689|gb|ABF98484.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710690|gb|ABF98485.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|108710691|gb|ABF98486.1| transposon protein, putative, CACTA, En/Spm sub-class, expressed
[Oryza sativa Japonica Group]
gi|113549509|dbj|BAF12952.1| Os03g0708600 [Oryza sativa Japonica Group]
gi|125545447|gb|EAY91586.1| hypothetical protein OsI_13221 [Oryza sativa Indica Group]
gi|125587655|gb|EAZ28319.1| hypothetical protein OsJ_12293 [Oryza sativa Japonica Group]
gi|215697317|dbj|BAG91311.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 736
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K L++ ERD +FR+ +NI G+ VP P+R + + S+ G E LLR + + GYKE
Sbjct: 282 TQKSLDEMTERDWRIFREDFNISYKGSKVPRPMRKWSE--SKLGTE--LLRAVEKAGYKE 337
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ +IP+ L R+ A TGSGKT AF+ PML
Sbjct: 338 PSPIQMASIPLGLQQRDVIGIAETGSGKTAAFVLPML 374
>gi|360044575|emb|CCD82123.1| putative dead box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 607
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/91 (47%), Positives = 60/91 (65%), Gaps = 10/91 (10%)
Query: 114 FRKKYNIHVSGAN----VPSPLRTFVKLSSRFGCE--SYLLRNLAELGYKEPTPIQRQAI 167
+R ++I VS N +P P+ +F S+F C+ +L NL+ELGYK PTPIQ Q+I
Sbjct: 35 YRLSHDIKVSAINRQSKIPPPIYSFW---SKF-CQISDLILHNLSELGYKTPTPIQSQSI 90
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+++ R ACAPTGSGKT A+L P+L +L
Sbjct: 91 PIMMQHRNLLACAPTGSGKTAAYLLPVLNQL 121
>gi|356538821|ref|XP_003537899.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1107
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQI-ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE++K E AV+RK+ + + G +VP P++++ + G S +L + ++ +++P
Sbjct: 456 KEVSKMTPEESAVYRKQLELKIHGKDVPKPIKSW----HQTGLASKILETIKKMNFEKPM 511
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+PV++S R+C A TGSGKTLAF+ PML ++
Sbjct: 512 PIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 550
>gi|189235329|ref|XP_975300.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 553
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R I V G VP P++TF L+ + ++ N+ + GY EPTP+Q+QA+P++L
Sbjct: 97 YRNLNKISVVGKRVPEPVKTFDDLN----VDPIIINNVKKCGYIEPTPVQKQAVPIMLEG 152
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R ACAPTGSGKT AFL P+L L+
Sbjct: 153 RNLLACAPTGSGKTAAFLIPILHDLK 178
>gi|226483435|emb|CAX74018.1| putative ATP-dependent RNA helicase DDX52 [Schistosoma japonicum]
Length = 606
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 8/90 (8%)
Query: 114 FRKKYNIHVSGAN----VPSPLRTFVKLSSR-FGCESYLLRNLAELGYKEPTPIQRQAIP 168
FR ++I +S N +P P+ +F SSR F +L NL EL YK PTPIQ Q+IP
Sbjct: 36 FRLCHSIKISAVNKKRKIPPPISSF---SSRLFHISDIILHNLCELSYKTPTPIQAQSIP 92
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
V++ R ACAPTGSGKT A+L P+L +L
Sbjct: 93 VMMQSRNLLACAPTGSGKTAAYLLPVLNQL 122
>gi|222639930|gb|EEE68062.1| hypothetical protein OsJ_26071 [Oryza sativa Japonica Group]
Length = 938
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 57/85 (67%), Gaps = 4/85 (4%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
RK + V G +VP P++T+V+ G S LL + +LG+++P PIQ QA+P+++S R
Sbjct: 277 RKNLELKVHGKDVPKPIKTWVQ----SGLTSKLLDTIKKLGFEKPMPIQAQALPIIMSGR 332
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLR 199
+C A TGSGKTLAF+ PML ++
Sbjct: 333 DCIGIAKTGSGKTLAFVLPMLRHVK 357
>gi|388855958|emb|CCF50533.1| probable U5 snRNP 100 kD protein [Ustilago hordei]
Length = 691
Score = 85.1 bits (209), Expect = 2e-14, Method: Composition-based stats.
Identities = 47/113 (41%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
PA +K D + K L++ ERD +FR+ + I G N+P PLR++ + S
Sbjct: 216 PARYDPLDKRFDEKHWSGKSLSEMKERDWRIFREDFGISARGGNIPKPLRSWRESS---- 271
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +L + E+GYKEP+PIQRQAIP+ L +R+ A TGSGKT +FL P+L
Sbjct: 272 IPATILSTIEEIGYKEPSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPLL 324
>gi|169844518|ref|XP_001828980.1| ROK1 [Coprinopsis cinerea okayama7#130]
gi|116510092|gb|EAU92987.1| ROK1 [Coprinopsis cinerea okayama7#130]
Length = 574
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 66/209 (31%), Positives = 95/209 (45%), Gaps = 42/209 (20%)
Query: 10 AGVSFDKKKFVTDFARFKEN-------KESENLADD-------FSFVEG------EKTDP 49
G+ FDK +F ++ F++N K ++ +D F + EG EKT
Sbjct: 10 GGLRFDKNRFKSEVGLFEQNQKPKPTSKATQTNGNDLPAELDFFKYAEGGKGKENEKTKR 69
Query: 50 EKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIE 109
+ + + ++RKR IA E VE ++ VE+G S A
Sbjct: 70 KSSEKTDERERKRPKIADEDVEMDDMSSDDD------------VEEGTSSA--------- 108
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
+A K+ I G N PS F +L R+ L NLA+ GY PT IQ IPV
Sbjct: 109 -NAQNVPKHRISTKGLNPPSQALRFEELKERYSLPPQLFNNLAKNGYHTPTAIQSAGIPV 167
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LL R+ A +PTG+GKTLA+L P+ +L
Sbjct: 168 LLESRDLAAISPTGTGKTLAYLLPLFARL 196
>gi|70994152|ref|XP_751923.1| DEAD/DEAH box helicase [Aspergillus fumigatus Af293]
gi|74671396|sp|Q4WPE9.1|PRP28_ASPFU RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|66849557|gb|EAL89885.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus Af293]
gi|159125162|gb|EDP50279.1| DEAD/DEAH box helicase, putative [Aspergillus fumigatus A1163]
Length = 796
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G LL + ++GYKE
Sbjct: 331 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW----EESGLPKRLLELVDQVGYKE 386
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQR AIP+ L R+ A TGSGKT +FL P+L+ + L
Sbjct: 387 PTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLVYISEL 429
>gi|76156166|gb|AAX27397.2| SJCHGC04912 protein [Schistosoma japonicum]
Length = 200
Score = 84.7 bits (208), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 44/90 (48%), Positives = 57/90 (63%), Gaps = 8/90 (8%)
Query: 114 FRKKYNIHVSGAN----VPSPLRTFVKLSSR-FGCESYLLRNLAELGYKEPTPIQRQAIP 168
FR ++I +S N +P P+ +F SSR F +L NL EL YK PTPIQ Q+IP
Sbjct: 36 FRLCHSIKISAVNKKRKIPPPISSF---SSRLFHISDIILHNLCELSYKTPTPIQAQSIP 92
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
V++ R ACAPTGSGKT A+L P+L +L
Sbjct: 93 VMMQSRNLLACAPTGSGKTAAYLLPVLNQL 122
>gi|164659482|ref|XP_001730865.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
gi|159104763|gb|EDP43651.1| hypothetical protein MGL_1864 [Malassezia globosa CBS 7966]
Length = 557
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 63/206 (30%), Positives = 105/206 (50%), Gaps = 29/206 (14%)
Query: 1 MEKGASFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTD-PEKAMVSFVKK 59
M+ ++ G FDKK+F D + F+E+++ + E E PE++
Sbjct: 1 MDLFSALTAGGTRFDKKRFSRDISLFQESRKRD---------ENEHARAPEQS------- 44
Query: 60 RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQ----IERDAV-- 113
AG + F S + AV + + + SK ++ + Q ++R +
Sbjct: 45 ------AGAALPASLDFFGSHKDERAVAEAEAGAAEDASKHRQRVTTQNNLPLQRSELPA 98
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F ++ + ++G +VP PL+T+ L +R+ E +L +NL + +KEPTPIQ A+ V+L
Sbjct: 99 FLRERQLKLTGTDVPLPLKTWHDLETRWHIEPWLYKNLLKGPWKEPTPIQCGAMSVMLDR 158
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A APTGSGKTLAF+ P L L+
Sbjct: 159 RDLLAGAPTGSGKTLAFVLPTLQLLK 184
>gi|320164395|gb|EFW41294.1| DEAD box ATP-dependent RNA helicase [Capsaspora owczarzaki ATCC
30864]
Length = 875
Score = 84.3 bits (207), Expect = 3e-14, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
A K L++ ERD + R+ YNI G ++P P+R + + G + +L + +LGY E
Sbjct: 406 ADKPLDQMTERDWRILREDYNIGAKGGHIPRPMRNW----NEIGLPTEILDIITDLGYTE 461
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQRQAIP+ L +R+ A TGSGKT AF+ P+L+
Sbjct: 462 PSPIQRQAIPIGLQNRDVIGIAQTGSGKTAAFVIPLLV 499
>gi|161784285|sp|Q5BCU6.2|PRP28_EMENI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|259486970|tpe|CBF85264.1| TPA: Pre-mRNA-splicing ATP-dependent RNA helicase prp28 (EC
3.6.1.-) [Source:UniProtKB/Swiss-Prot;Acc:Q5BCU6]
[Aspergillus nidulans FGSC A4]
Length = 782
Score = 84.3 bits (207), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G LL + +GYKE
Sbjct: 313 SEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSW----DESGLPKRLLELVDRVGYKE 368
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQR AIP+ + R+ A TGSGKT AFL P+L
Sbjct: 369 PTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLL 405
>gi|348502929|ref|XP_003439019.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Oreochromis
niloticus]
Length = 806
Score = 84.0 bits (206), Expect = 3e-14, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 85/149 (57%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERD-A 112
+KR++ G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 298 QKREQSRFYGDLMEKRRTLEEKEQEETRLKKMRKKEAKQRWDDRHWSQKKLDEMTDRDWR 357
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R + + +++L + + GYK+PTPIQRQAIP+ L
Sbjct: 358 IFREDYSITTKGGKIPNPIRNW----KEYPLPAHILEVIDKCGYKDPTPIQRQAIPIGLQ 413
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 414 NRDIIGVAETGSGKTAAFLIPLLVWITTL 442
>gi|359474788|ref|XP_002280049.2| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Vitis
vinifera]
Length = 1147
Score = 84.0 bits (206), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 57/88 (64%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +RK+ + + G +VP P++T+ + G + +L + +L Y+ P PIQ QA+P+++
Sbjct: 479 AAYRKQLELKIHGKDVPKPVKTW----HQTGLTTKILDTIKKLNYERPMPIQAQALPIIM 534
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAF+ PML ++
Sbjct: 535 SGRDCIGIAKTGSGKTLAFVLPMLRHIK 562
>gi|312066551|ref|XP_003136324.1| RNA helicase [Loa loa]
gi|307768519|gb|EFO27753.1| RNA helicase [Loa loa]
Length = 952
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ +I V G N P P+R++ ++ G E +L L +L YK+PTPIQ QAIP ++S
Sbjct: 274 YREELDIRVRGKNCPKPVRSW----AQCGVEWKILSTLKKLEYKKPTPIQSQAIPAIISG 329
Query: 174 RECFACAPTGSGKTLAFLCPM 194
R+ A TGSGKTLAFL PM
Sbjct: 330 RDVIGIAKTGSGKTLAFLLPM 350
>gi|121707307|ref|XP_001271794.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
gi|143359800|sp|A1CHL3.1|PRP28_ASPCL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|119399942|gb|EAW10368.1| dead box ATP-dependent rna helicase [Aspergillus clavatus NRRL 1]
Length = 798
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 61/98 (62%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G LL + +GYKE
Sbjct: 333 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW----EESGLPKRLLELVDRVGYKE 388
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQR AIP+ L R+ A TGSGKT +FL P+L+
Sbjct: 389 PTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLV 426
>gi|198425972|ref|XP_002127372.1| PREDICTED: similar to DEAD (Asp-Glu-Ala-Asp) box polypeptide 23
[Ciona intestinalis]
Length = 790
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 45/109 (41%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE++++ D KK+L + ERD +FR+ YNI G N+P P+R + +
Sbjct: 316 KERKRLYDDRHWTKKDLGEMQERDWRIFREDYNITTKGGNIPDPIRNWKECGD---LPPE 372
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
++ + +GYK+PTPIQRQAIP+ +R+ A TGSGKT AFL P+L
Sbjct: 373 IVEVIHRIGYKDPTPIQRQAIPIGFLNRDIIGVAETGSGKTAAFLIPLL 421
>gi|326431316|gb|EGD76886.1| hypothetical protein PTSG_08233 [Salpingoeca sp. ATCC 50818]
Length = 777
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/109 (42%), Positives = 71/109 (65%), Gaps = 5/109 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
K+++++ D ++K L +RD +FR+ YNI +G +PSPLR + S G +
Sbjct: 393 KKQKQLFDERHWSEKPLADMTKRDWRIFREDYNITTTGGRIPSPLRFW----SESGLDPR 448
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+L + +LG+KEPTPIQR A+P+ L++R+ A TGSGKTLAF+ P+L
Sbjct: 449 ILEIIDDLGFKEPTPIQRAALPIGLTNRDICGVAETGSGKTLAFVLPLL 497
>gi|395326045|gb|EJF58459.1| P-loop containing nucleoside triphosphate hydrolase protein
[Dichomitus squalens LYAD-421 SS1]
Length = 579
Score = 84.0 bits (206), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 60/202 (29%), Positives = 90/202 (44%), Gaps = 34/202 (16%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPE----KAMVSFVKKRKRKSI 65
G FDKKKF ++ + F +K E A + + PE K + KRK
Sbjct: 10 GGAKFDKKKFKSEVSLFNGSKGREPKASSSAHALAGELPPELDFFKYAQGGIPKRK---- 65
Query: 66 AGETVEGFNVFKSSKQ---------LVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRK 116
+ VEG K K+ ++ ++ ED P +
Sbjct: 66 -ADEVEGGIDLKGKKRRVEGDDEDEDEVVGSRDAQQTEDDPPMPR--------------- 109
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
+ + G +VP + TF L RF S+LL+ LA+ GYK PT IQ IP+L+ R+
Sbjct: 110 -HRVTTKGKDVPEHVETFEALRERFHLPSHLLQKLAQHGYKRPTGIQSHGIPILMERRDL 168
Query: 177 FACAPTGSGKTLAFLCPMLMKL 198
A +PTG+GKTL++L P++ L
Sbjct: 169 AAISPTGTGKTLSYLLPVMAAL 190
>gi|146161201|ref|XP_976799.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila]
gi|146146830|gb|EAR86204.2| Type III restriction enzyme, res subunit family protein
[Tetrahymena thermophila SB210]
Length = 668
Score = 84.0 bits (206), Expect = 4e-14, Method: Composition-based stats.
Identities = 46/178 (25%), Positives = 88/178 (49%)
Query: 21 TDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSK 80
T F + +EN + + + E + P++ + +K + + N+ + ++
Sbjct: 94 TSFYQKEENNRFQKQTEKVNQAVRESSQPKRKLSDNNLAQKYNENDSDDSDNENLKQLNE 153
Query: 81 QLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
Q+ + K +++ + + + + K Y + V G N+P L F K+ +
Sbjct: 154 QITQTKSRRKMSIDELEKDWEHQQQLKQAKIKALMKLYKVKVEGDNIPPLLTNFTKMQKK 213
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+G +L N+ + GY++PTPIQ Q++P+++ R A APTGSGKT A+ P+L KL
Sbjct: 214 YGFNQKILDNMKKAGYEKPTPIQMQSVPIIMEKRNLLALAPTGSGKTAAYCLPLLQKL 271
>gi|356497367|ref|XP_003517532.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like [Glycine
max]
Length = 1104
Score = 83.6 bits (205), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 102 KELNKQI-ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE++K E AV+RK+ + + G +VP P++++ + G S +L + ++ ++ P
Sbjct: 453 KEISKMTPEEAAVYRKQLELKIHGKDVPKPIKSW----HQTGLPSKILETIKKMNFEMPM 508
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+PV++S R+C A TGSGKTLAF+ PML ++
Sbjct: 509 PIQAQALPVIMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 547
>gi|384498852|gb|EIE89343.1| hypothetical protein RO3G_14054 [Rhizopus delemar RA 99-880]
Length = 754
Score = 83.6 bits (205), Expect = 4e-14, Method: Composition-based stats.
Identities = 60/196 (30%), Positives = 105/196 (53%), Gaps = 26/196 (13%)
Query: 15 DKKKFVTDFARFKENKESENLADDFSFVEGEKTDPE---KAMVSFVKKRKRKSIAGE--- 68
++KKFV D+ E+ + DF+ + K + + + ++ + ++++K E
Sbjct: 207 NEKKFVFDW------DAGEDTSYDFNPLYANKHNAQMFGRGRIAGIDEKEQKKHQSEFYD 260
Query: 69 -------TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNI 120
TVE + +Q+ ++ KE + D +K LN+ ERD +F++ +NI
Sbjct: 261 RLLKERRTVEELDRASELEQI--SLRKEAKTKWDERHWTEKPLNQMKERDWRIFKEDFNI 318
Query: 121 HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACA 180
G N+P PLR++ G +L+ + ++GYKEPTPIQRQAIP+ + +R+ A
Sbjct: 319 STKGGNIPHPLRSW----KESGLPDKMLQIIDDIGYKEPTPIQRQAIPIGIQNRDLIGIA 374
Query: 181 PTGSGKTLAFLCPMLM 196
TGSGKT +F+ P+L+
Sbjct: 375 ETGSGKTASFVIPLLV 390
>gi|409083276|gb|EKM83633.1| hypothetical protein AGABI1DRAFT_110276 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 566
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/195 (28%), Positives = 97/195 (49%), Gaps = 32/195 (16%)
Query: 10 AGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKS 64
GV F+K K+ D + F E + +L + F + ++ EK RK S
Sbjct: 10 GGVKFNKGKYKKDVSLFTETRRPPSTSHGDLPTELDFFKYARSSSEK--------RKYSS 61
Query: 65 IAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSG 124
I + +Q V E E +D ++ +E N I K+ + V G
Sbjct: 62 IP-----------TQQQNVEWKGDEDED-DDHVAEQSQEANSLI-------AKHRVTVKG 102
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
++P+P+ +F L ++ + L +NL++ GY+ PT IQ A+P++++ R+ A +PTG+
Sbjct: 103 NDIPNPVGSFEVLREKYHISNQLFQNLSKSGYRHPTSIQSHAVPIMMNSRDLAAISPTGT 162
Query: 185 GKTLAFLCPMLMKLR 199
GKTL++L P+L +L+
Sbjct: 163 GKTLSYLLPILARLQ 177
>gi|258577621|ref|XP_002542992.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
gi|237903258|gb|EEP77659.1| hypothetical protein UREG_02508 [Uncinocarpus reesii 1704]
Length = 783
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 66/98 (67%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +F++ +NI G ++P+P+R++ + + + LL + ++GYK+
Sbjct: 310 SQKKLEQMRERDWRIFKEDFNISTKGGSIPNPMRSWGEST----LPARLLEIIDKVGYKD 365
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 366 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 403
>gi|358347102|ref|XP_003637601.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355503536|gb|AES84739.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 781
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 43/97 (44%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ YNI G+ +P P+R++V+ S+ E LL+ + + GYK
Sbjct: 253 SEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWVE--SKLSQE--LLKAVEKAGYKT 308
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 309 PSPIQMAAIPLGLQQRDVIGVAETGSGKTAAFVLPML 345
>gi|407850251|gb|EKG04705.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi]
Length = 553
Score = 83.6 bits (205), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 65/203 (32%), Positives = 92/203 (45%), Gaps = 29/203 (14%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTD---------PEKAMVSFVK 58
L G+ FD KK RF EN D F G T P + + F +
Sbjct: 7 LTTGIRFDVKKHGAAMKRFT----PENTKLDRPFALGNSTPICDIMKVPMPNRTLDIFGR 62
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKEL-NKQIERDAVFRKK 117
R AG T EG + + K + + + + A + + I++ KK
Sbjct: 63 SRS----AG-TSEGVRLLEG---------KAQGDIRNNATTAHTPVKSMSIKKKRNLWKK 108
Query: 118 YNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
+ V G +VP P+ F +L + L+ NL E ++ PTPIQ QAIP L++ R+
Sbjct: 109 NELEVEGVDVPQPIEHFSELVRPPLSVDERLVSNLFERNHRIPTPIQMQAIPCLINKRDV 168
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
ACAPTGSGKTL+FL PM L+
Sbjct: 169 LACAPTGSGKTLSFLIPMFHILK 191
>gi|302695853|ref|XP_003037605.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
gi|300111302|gb|EFJ02703.1| hypothetical protein SCHCODRAFT_13834 [Schizophyllum commune H4-8]
Length = 524
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 57/196 (29%), Positives = 93/196 (47%), Gaps = 32/196 (16%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGET 69
G FDKK+F D F+ P KA S KK+K +S +
Sbjct: 10 GGAQFDKKRFKGDVELFQ---------------------PSKAGQSEGKKKKTQSTSNLP 48
Query: 70 VEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI-------ERDAVFRKKYNIHV 122
+ + FK ++ + K K D ++ K+ + + + + R+K+ +
Sbjct: 49 SD-LDFFKYAES---SSSKRKTDSTDPNTRKKRRVEADVAEGEGSNDEEEAPRQKHRVTA 104
Query: 123 SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
G N+P +TF ++ R+ S LL NL++ G+K PT IQ IP+LL R+ A +PT
Sbjct: 105 KGINIPVAAQTFGEMKERYDMPSLLLSNLSKHGFKHPTGIQSHGIPILLEKRDLAAISPT 164
Query: 183 GSGKTLAFLCPMLMKL 198
G+GKTL++L P++ L
Sbjct: 165 GTGKTLSYLLPIIAAL 180
>gi|380023466|ref|XP_003695543.1| PREDICTED: ATP-dependent RNA helicase vasa, isoform A-like [Apis
florea]
Length = 629
Score = 83.2 bits (204), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 45/119 (37%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
PS K +E F K NI +VSG NVP P+ +F G + +L N+ +
Sbjct: 158 PSDEKSLFENGVEIGINFDKYDNIQVNVSGENVPEPIESF----EAAGLRNIVLDNIKKS 213
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM---LMKLRVLFIPFDYFCE 210
GYK+PTP+Q+ A+P++++ R+ ACA TGSGKT AF P+ L++ V + +CE
Sbjct: 214 GYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCE 272
>gi|302815223|ref|XP_002989293.1| hypothetical protein SELMODRAFT_129678 [Selaginella moellendorffii]
gi|300142871|gb|EFJ09567.1| hypothetical protein SELMODRAFT_129678 [Selaginella moellendorffii]
Length = 209
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 102 KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+ + + D +RK+ + V G +VP P++T+ ++ G S +L + +LG++ P
Sbjct: 103 KEIQRMSKEDVTAYRKELELKVKGKDVPKPIKTW----NQTGLSSKMLDVIKKLGFERPM 158
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P++++ R+C A TGSGKTLAF+ PML ++
Sbjct: 159 PIQAQALPIIMNGRDCIGIAKTGSGKTLAFVLPMLRHIK 197
>gi|310656783|gb|ADP02213.1| putative DEAD-box ATP-dependent RNA helicase [Triticum aestivum]
Length = 742
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + ++GYK+
Sbjct: 288 SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE--SKLGTE--LLRAIEKVGYKK 343
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 344 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 380
>gi|357118013|ref|XP_003560754.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Brachypodium distachyon]
gi|357118015|ref|XP_003560755.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Brachypodium distachyon]
Length = 734
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + ++GYK+
Sbjct: 280 SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE--SKLGAE--LLRAIDKVGYKK 335
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 336 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
>gi|212540616|ref|XP_002150463.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
gi|210067762|gb|EEA21854.1| DEAD/DEAH box helicase, putative [Talaromyces marneffei ATCC 18224]
Length = 808
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G +VP+P+R++ G LL + ++GY +
Sbjct: 335 SEKRLDQMRERDWRIFKEDFNISTKGGSVPNPMRSW----EESGLPRRLLDLIKQVGYAD 390
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQR AIP+ L R+ A TGSGKT +FL P+L+
Sbjct: 391 PTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLLV 428
>gi|443896844|dbj|GAC74187.1| U5 snRNP-like RNA helicase subunit [Pseudozyma antarctica T-34]
Length = 698
Score = 83.2 bits (204), Expect = 7e-14, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ + I G N+P PLR++ + S +L + E+GY E
Sbjct: 242 SEKTLEQMKERDWRIFREDFGISARGGNIPRPLRSWRESS----IPPSILATIEEIGYTE 297
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT +FL PML
Sbjct: 298 PSPIQRQAIPIGLQNRDLIGIAETGSGKTASFLIPML 334
>gi|326526777|dbj|BAK00777.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 731
Score = 83.2 bits (204), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K + + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + ++GYK+
Sbjct: 277 SEKGIEEMTERDWRIFREDFNISYKGSRIPRPMRNWPE--SKLGTE--LLRAIEKVGYKK 332
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 333 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 369
>gi|407921626|gb|EKG14767.1| RNA helicase ATP-dependent DEAD-box conserved site [Macrophomina
phaseolina MS6]
Length = 619
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GY E
Sbjct: 153 SEKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----EESGLPKRLLDIIKDVGYLE 208
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 209 PSPIQRAAIPIALGSRDLIGVAVTGSGKTAAFLLPLLVYISEL 251
>gi|41054055|ref|NP_956176.1| probable ATP-dependent RNA helicase DDX23 [Danio rerio]
gi|38014376|gb|AAH60524.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 23 [Danio rerio]
Length = 807
Score = 82.8 bits (203), Expect = 7e-14, Method: Composition-based stats.
Identities = 50/149 (33%), Positives = 83/149 (55%), Gaps = 9/149 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQ----LVPAVDKEKEKVEDGPSKAKKELNKQIERD-A 112
+KR + G+ +E + +Q L KE ++ D ++K+L++ +RD
Sbjct: 299 QKRDQSRFYGDLMEKRRTNEEKEQEEQRLKKVRKKEAKQRWDDRHWSQKKLDEMTDRDWR 358
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ Y+I G +P+P+R + + ++L + + GYK+PTPIQRQAIP+ L
Sbjct: 359 IFREDYSITTKGGKIPNPIRNW----KEYSLPPHILEVIEKCGYKDPTPIQRQAIPIGLQ 414
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+R+ A TGSGKT AFL P+L+ + L
Sbjct: 415 NRDIIGVAETGSGKTAAFLIPLLVWITTL 443
>gi|357130377|ref|XP_003566825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 42-like
[Brachypodium distachyon]
Length = 1045
Score = 82.8 bits (203), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +RK + V G +VP P++T+++ G S LL + +LG+++P IQ QA+P+++
Sbjct: 402 ASYRKLLELKVRGKDVPKPIKTWIQ----SGLTSKLLDTIKKLGFEKPMSIQAQALPIIM 457
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+C A TGSGKTLAF+ PML ++
Sbjct: 458 SGRDCIGVAKTGSGKTLAFVLPMLRHVK 485
>gi|225679862|gb|EEH18146.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Paracoccidioides brasiliensis Pb03]
Length = 615
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/120 (36%), Positives = 72/120 (60%), Gaps = 11/120 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G +VP+P+R++ +
Sbjct: 121 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWAE-- 178
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+ +
Sbjct: 179 --SGLPKRLLSIIDKVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYI 236
>gi|402591636|gb|EJW85565.1| DEAD box RNA helicase [Wuchereria bancrofti]
Length = 952
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ +I V G N P P+R++ ++ G E +L L +L YK+PTPIQ QAIP ++S
Sbjct: 274 YREELDIRVRGKNCPKPIRSW----AQCGVEWKILSTLKKLEYKKPTPIQCQAIPAIISG 329
Query: 174 RECFACAPTGSGKTLAFLCPM 194
R+ A TGSGKTLAFL PM
Sbjct: 330 RDVIGIAKTGSGKTLAFLLPM 350
>gi|261335430|emb|CBH18424.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
gambiense DAL972]
Length = 556
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 6 SFLFAGVSFDKKKFVTDFARFKE---NKESENLADDFSFVEGEKTDPEKAMVSFVKKRKR 62
S L G F+ KK T RF++ N+E + S G P +
Sbjct: 5 SALSTGAKFEPKKHGTAIKRFRQASGNREQTGALNLVSLSRGSVELPTPS---------- 54
Query: 63 KSIAGETVEGFNVFKSSKQLVPAVDKEKEK-------VEDGPSKAKKELNKQIERDAVFR 115
T+E F V K + + + ++E + K N ++R
Sbjct: 55 -----HTLEIFGVPKRMRCQETSAEGDEESRGRCDTDTSSAATGHKPLKNMSVKRRRNIW 109
Query: 116 KKYNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
+K + V+G +VP P+ F +L + L+ NL E ++ PTPIQ Q IP L+ R
Sbjct: 110 RKNELDVTGMDVPQPIEHFSQLLRPPLSLDECLISNLFERNHRIPTPIQMQTIPCLVQGR 169
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ ACAPTGSGKT+AFL PM +L
Sbjct: 170 DVLACAPTGSGKTVAFLIPMFARL 193
>gi|328870357|gb|EGG18732.1| putative RNA helicase [Dictyostelium fasciculatum]
Length = 734
Score = 82.8 bits (203), Expect = 8e-14, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 57/85 (67%), Gaps = 1/85 (1%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K NI V+G ++P+ +++F +L + Y+L+N+ YK+P+PIQ Q+IP ++S
Sbjct: 226 RTKLNISVTGTDIPNVIQSFDELLEEPYNMRQYILKNIRAAKYKDPSPIQMQSIPAIISG 285
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
RE ACAPTGSGKT AF P+L L
Sbjct: 286 REVIACAPTGSGKTAAFSIPILQSL 310
>gi|74025742|ref|XP_829437.1| ATP-dependent DEAD/H RNA helicase [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70834823|gb|EAN80325.1| ATP-dependent DEAD/H RNA helicase, putative [Trypanosoma brucei
brucei strain 927/4 GUTat10.1]
Length = 556
Score = 82.8 bits (203), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 61/204 (29%), Positives = 90/204 (44%), Gaps = 26/204 (12%)
Query: 6 SFLFAGVSFDKKKFVTDFARFKE---NKESENLADDFSFVEGEKTDPEKAMVSFVKKRKR 62
S L G F+ KK T RF++ N+E + S G P +
Sbjct: 5 SALSTGAKFEPKKHGTAIKRFRQASGNREQTGALNLVSLSRGSVELPTPS---------- 54
Query: 63 KSIAGETVEGFNVFKSSKQLVPAVDKEKEK-------VEDGPSKAKKELNKQIERDAVFR 115
T+E F V K + + + ++E + K N ++R
Sbjct: 55 -----HTLEIFGVPKRMRCQETSAEGDEESRGRCDTDTSSAATGHKPLKNMSVKRRRNIW 109
Query: 116 KKYNIHVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
+K + V+G +VP P+ F +L + L+ NL E ++ PTPIQ Q IP L+ R
Sbjct: 110 RKNELDVTGMDVPQPIEHFSQLLRPPLSLDECLISNLFERNHRIPTPIQMQTIPCLVQGR 169
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ ACAPTGSGKT+AFL PM +L
Sbjct: 170 DVLACAPTGSGKTVAFLIPMFARL 193
>gi|170589285|ref|XP_001899404.1| KIAA0801 protein [Brugia malayi]
gi|158593617|gb|EDP32212.1| KIAA0801 protein, putative [Brugia malayi]
Length = 964
Score = 82.8 bits (203), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 39/81 (48%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ +I V G N P P+R++ ++ G E +L L +L YK+PTPIQ QAIP ++S
Sbjct: 286 YREELDIRVRGKNCPKPIRSW----AQCGVEWKILSTLKKLEYKKPTPIQCQAIPAIISG 341
Query: 174 RECFACAPTGSGKTLAFLCPM 194
R+ A TGSGKTLAFL PM
Sbjct: 342 RDVIGIAKTGSGKTLAFLLPM 362
>gi|302785159|ref|XP_002974351.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
gi|300157949|gb|EFJ24573.1| hypothetical protein SELMODRAFT_149865 [Selaginella moellendorffii]
Length = 523
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 65/112 (58%), Gaps = 5/112 (4%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
+D+E + + ++KE+++ RD +FR+ YNI G+ P+P R + G
Sbjct: 67 IDRESKGQIEPKHWSEKEIHEMTSRDWRIFREDYNISYKGSRFPNPARNW----EESGIC 122
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LR + E GYK+PTPIQ +IP+ L R+ A TGSGKT AF+ PMLM
Sbjct: 123 PEILRAVQEAGYKKPTPIQMASIPLGLQQRDVIGIAGTGSGKTAAFVIPMLM 174
>gi|452825003|gb|EME32002.1| ATP-dependent RNA helicase [Galdieria sulphuraria]
Length = 496
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 58/95 (61%), Gaps = 1/95 (1%)
Query: 105 NKQIERDAVFRKKYNIHVSG-ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
N + + RK +I ++ PS L F +L + FG LL+ L LGY +PTPIQ
Sbjct: 58 NSRANLERYMRKHLHIRLNKELRSPSLLLQFHELHTIFGVSEQLLKRLDSLGYHQPTPIQ 117
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
RQ IP +LS+ + AC+ TGSGKTLAF+ P++ KL
Sbjct: 118 RQVIPCMLSEMQVLACSATGSGKTLAFVIPIISKL 152
>gi|302798400|ref|XP_002980960.1| hypothetical protein SELMODRAFT_6590 [Selaginella moellendorffii]
gi|300151499|gb|EFJ18145.1| hypothetical protein SELMODRAFT_6590 [Selaginella moellendorffii]
Length = 116
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 102 KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+ + + D +RK+ + V G +VP P++T+ ++ G S +L + +LG++ P
Sbjct: 10 KEIQRMSKEDVTAYRKELELKVKGKDVPKPIKTW----NQTGLSSKMLDVIKKLGFERPM 65
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P++++ R+C A TGSGKTLAF+ PML ++
Sbjct: 66 PIQAQALPIIMNGRDCIGIAKTGSGKTLAFVLPMLRHIK 104
>gi|68484469|ref|XP_713845.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
gi|68484548|ref|XP_713805.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|74656226|sp|Q59W52.1|PRP28_CANAL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|46435319|gb|EAK94703.1| hypothetical protein CaO19.672 [Candida albicans SC5314]
gi|46435361|gb|EAK94744.1| hypothetical protein CaO19.8289 [Candida albicans SC5314]
Length = 581
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 60/97 (61%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
K L + +RD +F++ YNI G N+P+PLR + + S L+ +++LGY+E
Sbjct: 135 TNKNLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGS----INDKLVSIISQLGYEE 190
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PT +QR +IP+ L R+ A TGSGKTLAFL P+L
Sbjct: 191 PTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVL 227
>gi|94400887|ref|NP_001035345.1| ATP-dependent RNA helicase vasa [Apis mellifera]
gi|83701804|gb|ABC41341.1| vasa protein [Apis mellifera]
Length = 630
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
P+ K +E F K NI +VSG NVP P+ +F G + +L N+ +
Sbjct: 159 PNDEKSLFENGVEIGINFDKYDNIQVNVSGDNVPQPIESF----EAAGLRNIVLDNIKKS 214
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM---LMKLRVLFIPFDYFCE 210
GYK+PTP+Q+ A+P++++ R+ ACA TGSGKT AF P+ L++ V + +CE
Sbjct: 215 GYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCE 273
>gi|413917331|gb|AFW57263.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 1065
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 41/99 (41%), Positives = 64/99 (64%), Gaps = 5/99 (5%)
Query: 102 KELNKQIERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K++ K + V +RK + V G +VP P++T+V+ G S LL + +LG+++P
Sbjct: 409 KDITKMTSEEVVDYRKHLELKVHGKDVPKPIKTWVQ----SGLTSKLLDTIKKLGFEKPM 464
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 465 PIQTQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHVK 503
>gi|238878470|gb|EEQ42108.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 581
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
K+L + +RD +F++ YNI G N+P+PLR + + S L+ +++LGY+E
Sbjct: 135 TNKKLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWNEGS----INDKLVSIISQLGYEE 190
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PT +QR +IP+ L R+ A TGSGKTLAFL P+L
Sbjct: 191 PTSVQRASIPLALKKRDVVGVAETGSGKTLAFLIPVL 227
>gi|403414605|emb|CCM01305.1| predicted protein [Fibroporia radiculosa]
Length = 874
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 96/190 (50%), Gaps = 15/190 (7%)
Query: 10 AGVSFDKKKFVTDFARF-KENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGE 68
G FDK KF DF F K ++ + F +GE PE + F K + + +
Sbjct: 311 GGAKFDKNKFKDDFRLFDKTERQRDKAKAAVKFADGE-LPPE---LDFFKYAQGGAPKRK 366
Query: 69 TVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVP 128
E ++ + ++ V ++ + E P+ ++ E + I R V K G+NVP
Sbjct: 367 ETESGSLGRVGEE-VGGTQMKRRRTE--PTDSQDEDSPPIPRHRVTAK-------GSNVP 416
Query: 129 SPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTL 188
+ +F L R+ + LL NL++ G+K PT IQ AIP+LL R+ A +PTG+GKTL
Sbjct: 417 KHIESFEDLQERYKLHTQLLFNLSDSGFKRPTGIQSHAIPILLESRDLAAISPTGTGKTL 476
Query: 189 AFLCPMLMKL 198
++L P++ L
Sbjct: 477 SYLLPIISSL 486
>gi|388579900|gb|EIM20219.1| P-loop containing nucleoside triphosphate hydrolase protein
[Wallemia sebi CBS 633.66]
Length = 626
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 62/102 (60%), Gaps = 5/102 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D + +KEL++ ERD + + +NI G +P PLR++ + +L + E
Sbjct: 169 DSRNWREKELSQMTERDWRIVNEDFNISARGGQIPRPLRSW----EESAIPAEILDIIKE 224
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+GYKEP+ IQRQAIP+ L++R+ A TGSGKT +F+ PM+
Sbjct: 225 IGYKEPSAIQRQAIPIGLNNRDLIGIAETGSGKTASFVIPMM 266
>gi|322701026|gb|EFY92777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
acridum CQMa 102]
Length = 712
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 88 KEKEKVED---GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
K KE+ E G ++K+L + ERD +F++ + I G +P P+R++ G
Sbjct: 223 KAKERAERTGLGRHWSEKKLGEMRERDWRIFKEDFGISTKGGAIPDPMRSW----EESGL 278
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL + +GYKEPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 279 PQRLLDIVDRVGYKEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 331
>gi|390604084|gb|EIN13475.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 592
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%)
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
K+ + G+NVP P TF L R+ LL NL E GY+ PT IQ P+LLS R+
Sbjct: 102 KHRVTTRGSNVPPPAETFEDLQQRYNVPPRLLTNLRESGYRTPTSIQAYGAPILLSARDL 161
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
A +PTG+GKTL++L P+ LR
Sbjct: 162 AAISPTGTGKTLSYLLPVFAALR 184
>gi|148613135|gb|ABQ96192.1| vasa, partial [Melipona scutellaris]
gi|205318889|gb|ACI02436.1| vasa [Melipona quadrifasciata]
Length = 624
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
P+ K +E F K NI +VSG NVP P+ +F G + +L N+ +
Sbjct: 157 PNDEKSLFENGVEIGINFDKYDNIQVNVSGDNVPQPIESF----EAAGLRNIVLDNIKKS 212
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM---LMKLRVLFIPFDYFCE 210
GYK+PTP+Q+ A+P++++ R+ ACA TGSGKT AF P+ L++ V + +CE
Sbjct: 213 GYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCE 271
>gi|393218769|gb|EJD04257.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 573
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 60/198 (30%), Positives = 97/198 (48%), Gaps = 33/198 (16%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGET 69
GV FDKK+F D F +++ E ++ S EG K R G+
Sbjct: 10 GGVQFDKKRFKADVQLF--DRKYEQASEIGS--EG-------------KTR------GDL 46
Query: 70 VEGFNVFKSSKQLVP--AVDKEKEKVEDGPSKAKKELNKQIERDAVFRK------KYNIH 121
+ FK ++ P + + E+G +A +E K+++ DAV ++ ++ +
Sbjct: 47 PSELDFFKYTQGAAPKRKIRQASSSHENG--EASREETKRVKFDAVHKEEGPSQPRHRVT 104
Query: 122 VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAP 181
V G NV P+ TF L +F +++NL E GY PT IQ A P++L R+ A +P
Sbjct: 105 VKGTNVSDPVHTFEALQEKFDVSPRIIQNLKEYGYSSPTDIQSYATPIMLQGRDLAAISP 164
Query: 182 TGSGKTLAFLCPMLMKLR 199
TG+GKTL++L P+ L+
Sbjct: 165 TGTGKTLSYLVPIFSLLK 182
>gi|168059277|ref|XP_001781630.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162666944|gb|EDQ53586.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1072
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 65/98 (66%), Gaps = 5/98 (5%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+++ + +A +RK+ + + G +VP PL+T+ ++ G S +L + + G+++P
Sbjct: 447 KEISRMTKAEAEAYRKELELKIRGKDVPRPLKTW----NQTGLNSKVLDVIKKSGFEKPM 502
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PIQ QA+P+++S R+C A TGSGKTLAF+ PML +
Sbjct: 503 PIQTQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHI 540
>gi|322706999|gb|EFY98578.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Metarhizium
anisopliae ARSEF 23]
Length = 714
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 65/113 (57%), Gaps = 8/113 (7%)
Query: 88 KEKEKVED---GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
K KE+ E G ++K+L + ERD +F++ + I G +P P+R++ G
Sbjct: 224 KAKERAERTGLGRHWSEKKLGEMRERDWRIFKEDFGISTKGGAIPDPMRSW----EESGL 279
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL + +GYKEPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 280 PQRLLDIVDRVGYKEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 332
>gi|148613133|gb|ABQ96191.1| vasa, partial [Scaptotrigona postica]
gi|205318891|gb|ACI02437.1| vasa [Frieseomelitta varia]
Length = 624
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/119 (36%), Positives = 67/119 (56%), Gaps = 9/119 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
P+ K +E F K NI +VSG NVP P+ +F G + +L N+ +
Sbjct: 157 PNDEKSLFENGVEIGINFDKYDNIQVNVSGDNVPQPIESF----EAAGLRNIVLDNIKKS 212
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM---LMKLRVLFIPFDYFCE 210
GYK+PTP+Q+ A+P++++ R+ ACA TGSGKT AF P+ L++ V + +CE
Sbjct: 213 GYKKPTPVQKHALPIIMNGRDLMACAQTGSGKTAAFAVPIINTLLERSVDLVVTSTYCE 271
>gi|357445503|ref|XP_003593029.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
gi|355482077|gb|AES63280.1| DEAD box ATP-dependent RNA helicase [Medicago truncatula]
Length = 1148
Score = 82.0 bits (201), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 65/99 (65%), Gaps = 5/99 (5%)
Query: 102 KELNKQ-IERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE++K +E A +RK+ + + G +VP P++++ ++ G S +L + + +++P
Sbjct: 502 KEVSKMTVEEVAFYRKQLELKIHGKDVPKPVKSW----NQTGLTSKILDTIKKANFEKPM 557
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PIQ QA+PV++S R+C A TGSGKTLAF+ PML ++
Sbjct: 558 PIQAQALPVIMSGRDCIGVAKTGSGKTLAFVLPMLRHIK 596
>gi|390339167|ref|XP_789805.2| PREDICTED: probable ATP-dependent RNA helicase DDX23
[Strongylocentrotus purpuratus]
Length = 785
Score = 82.0 bits (201), Expect = 1e-13, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 72/116 (62%), Gaps = 5/116 (4%)
Query: 87 DKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
++E + + D +K+L + +RD +FR+ +NI G ++P P+R + +G
Sbjct: 310 NREDKLIYDERHWKQKKLLEMKDRDWRIFREDFNISTKGGHIPHPIRFW----DEYGLPK 365
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ +AE+GYK+P+PIQRQAIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 366 HITDIIAEVGYKDPSPIQRQAIPIGLQNRDVIGVAETGSGKTAAFLIPLLVWISTL 421
>gi|169853351|ref|XP_001833356.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
gi|116505566|gb|EAU88461.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coprinopsis
cinerea okayama7#130]
Length = 748
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 101 KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
+K LN+ ERD +FR+ ++I G N+P PLR++ +L + +GYKEP
Sbjct: 289 EKPLNEMKERDWRIFREDFSISARGGNIPHPLRSW----EESDIPQVILDCIERIGYKEP 344
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 345 SPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPML 380
>gi|84996425|ref|XP_952934.1| DEAD-family helicase [Theileria annulata strain Ankara]
gi|65303931|emb|CAI76310.1| DEAD-family helicase, putative [Theileria annulata]
Length = 757
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
KK+L++ ERD +FR+ + I++ G VP P+RT+ + S E LL + + GY +
Sbjct: 306 TKKKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAE--SPLPWE--LLEAIKKAGYIK 361
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 362 PTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKL 404
>gi|320166884|gb|EFW43783.1| DEAD/DEAH box helicase [Capsaspora owczarzaki ATCC 30864]
Length = 876
Score = 82.0 bits (201), Expect = 2e-13, Method: Composition-based stats.
Identities = 42/85 (49%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K + VSG+NVPSP +F FG +S L+ +++ GY +PTPIQ QA+PV LS
Sbjct: 272 LRRKLQLRVSGSNVPSPCVSF----GHFGFDSPLMAAISKHGYTQPTPIQAQAVPVGLSG 327
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AFL PML+ +
Sbjct: 328 RDIIGIAKTGSGKTAAFLWPMLVHI 352
>gi|302818333|ref|XP_002990840.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
gi|300141401|gb|EFJ08113.1| hypothetical protein SELMODRAFT_11027 [Selaginella moellendorffii]
Length = 583
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++KE+++ RD +FR+ YNI G+ P+P R + G +LR + E GYK+
Sbjct: 152 SEKEIHEMTSRDWRIFREDYNISYKGSRFPNPARNW----EESGICPEILRAVQEAGYKK 207
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQ +IP+ L R+ A TGSGKT AF+ PMLM
Sbjct: 208 PTPIQMASIPLGLQQRDVIGIAGTGSGKTAAFVIPMLM 245
>gi|401398216|ref|XP_003880249.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
gi|325114658|emb|CBZ50214.1| dead-box helicase family protein, related [Neospora caninum
Liverpool]
Length = 856
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 69/119 (57%), Gaps = 12/119 (10%)
Query: 88 KEKEKVEDG----PSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
+EKE ED +K ++E+N ERD +FR+ + I++ G VP P+RT+ + + +
Sbjct: 576 REKENAEDNRGHWTTKKREEMN---ERDWRIFREDFEIYIKGGRVPPPIRTWAESALPW- 631
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L+ + Y+ PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 632 ---ELIEAVKHANYERPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGL 687
>gi|426201672|gb|EKV51595.1| hypothetical protein AGABI2DRAFT_189828 [Agaricus bisporus var.
bisporus H97]
Length = 566
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 58/83 (69%)
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
K+ + V G ++P+P+ +F L ++ + L +NL++ GY+ PT IQ A+P++++ R+
Sbjct: 95 KHRVTVKGNDIPNPVGSFEVLREKYHISNQLFQNLSKSGYRHPTSIQSHAVPIMMNSRDL 154
Query: 177 FACAPTGSGKTLAFLCPMLMKLR 199
A +PTG+GKTL++L P+L +L+
Sbjct: 155 AAISPTGTGKTLSYLLPILARLQ 177
>gi|359475106|ref|XP_003631587.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 712
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+L + ERD +FR+ +NI G+ +P P+R++V+ S+ E LL+ + GYK
Sbjct: 259 TEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVE--SKLSTE--LLKAVERAGYKT 314
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 315 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 351
>gi|342186417|emb|CCC95903.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 552
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 60/197 (30%), Positives = 92/197 (46%), Gaps = 11/197 (5%)
Query: 6 SFLFAGVSFDKKKFVTDFARFKE--NKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRK 63
S L AG+ F+ KK T RFK + + + SF++G+ P + + R+
Sbjct: 5 SSLSAGIKFEVKKHGTAMKRFKTCASGDVTEVPGVPSFLQGDVVLPAPSYTLELFGDTRR 64
Query: 64 SIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVS 123
+ E + + ++ AV K P + N ++ +K + V
Sbjct: 65 VHSTEAFDEGGTMRGARNGEEAV---KSTTTHKPLR-----NMSVKEVRSVWRKNELEVE 116
Query: 124 GANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
G ++P P+ +F L +YL+ NL E + PT IQ Q IP L+ R+ ACAPT
Sbjct: 117 GVDIPQPIGSFSDLLRPPLSVSNYLVSNLLERNHCIPTAIQMQTIPCLVQGRDVLACAPT 176
Query: 183 GSGKTLAFLCPMLMKLR 199
GSGKTLAFL PM +L+
Sbjct: 177 GSGKTLAFLLPMFARLK 193
>gi|301112328|ref|XP_002905243.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095573|gb|EEY53625.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 709
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 59/97 (60%), Gaps = 7/97 (7%)
Query: 109 ERDAV--FRKKYNIHVSGANVPSPLRTF--VKLSSRFGCESY---LLRNLAELGYKEPTP 161
E+D V R++ I VSG +VP+P+ +F ++L S + LL+N+ YKEPT
Sbjct: 214 EQDGVQMLRRQLGIRVSGVSVPAPITSFADMRLDSSASAQQMKRLLLQNIERSEYKEPTS 273
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+Q QAIP LL R+ A APTGSGKT AF P+L L
Sbjct: 274 VQMQAIPSLLLRRDVLATAPTGSGKTAAFAIPILANL 310
>gi|407410868|gb|EKF33151.1| RNA helicase, putative,ATP-dependent RNA helicase, putative
[Trypanosoma cruzi marinkellei]
Length = 546
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 63/200 (31%), Positives = 87/200 (43%), Gaps = 23/200 (11%)
Query: 8 LFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAG 67
L G FD KK RF EN D F G T M + R
Sbjct: 7 LKTGTKFDVKKHGAAMKRFT----PENTKLDHPFAPGNSTPVCDIMEVPMPSRT------ 56
Query: 68 ETVEGFNVFKSSKQL------VPAVDKEKEKVEDGPSKAKKELN-KQIERDAVFRKKYNI 120
++F SK + P K +E + + + + I++ KK +
Sbjct: 57 -----LDIFGRSKSVGTNEGARPLEGKAQEDIRNNGTTTHTPVKIMSIKKKRNLWKKNEL 111
Query: 121 HVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
V G +VP P+ F +L + L+ NL E ++ PTPIQ QAIP L++ R+ AC
Sbjct: 112 EVEGVDVPQPIEHFSELVRPPLSVDERLVSNLFERNHRIPTPIQMQAIPCLINKRDVLAC 171
Query: 180 APTGSGKTLAFLCPMLMKLR 199
APTGSGKTL+FL PM L+
Sbjct: 172 APTGSGKTLSFLIPMFHILK 191
>gi|241949959|ref|XP_002417702.1| DEAD/DEAH box helicase , putative [Candida dubliniensis CD36]
gi|223641040|emb|CAX45414.1| DEAD/DEAH box helicase , putative [Candida dubliniensis CD36]
Length = 568
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/121 (37%), Positives = 70/121 (57%), Gaps = 13/121 (10%)
Query: 83 VPAVDKEKE------KVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV 135
VP +D ++E ++ K+L + +RD +F++ YNI G N+P+PLR +
Sbjct: 99 VPLIDMDEELDDPLFSGQESTHWTNKKLEEMTDRDWRIFKEDYNITTKGKNIPNPLRYWH 158
Query: 136 KLSSRFGCES-YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
+ G + L+ +++LGY EPT +QR +IP+ L R+ A TGSGKTLAFL P+
Sbjct: 159 E-----GLNNDKLVSIISQLGYDEPTSVQRASIPLALMKRDVVGVAETGSGKTLAFLIPV 213
Query: 195 L 195
L
Sbjct: 214 L 214
>gi|71028514|ref|XP_763900.1| small nuclear ribonucleoprotein [Theileria parva strain Muguga]
gi|68350854|gb|EAN31617.1| small nuclear ribonucleoprotein, putative [Theileria parva]
Length = 744
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/103 (43%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
KK+L++ ERD +FR+ + I++ G VP P+RT+ + S E LL + + GY +
Sbjct: 296 TKKKLSEMTERDWRIFREDFEIYIKGGRVPPPIRTWAE--SPLPWE--LLEAIKKAGYIK 351
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 352 PTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKKL 394
>gi|110739876|dbj|BAF01843.1| putative RNA helicase [Arabidopsis thaliana]
Length = 632
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 107 QIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
++ +DAV +RK+ + V G +VP P++ + + G S +L L +L Y++P PIQ
Sbjct: 335 RMTQDAVNAYRKELELKVHGKDVPRPIQFW----HQTGLTSKILDTLKKLNYEKPMPIQA 390
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QA+P+++S R+C A TGSGKTL F+ PML ++
Sbjct: 391 QALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 425
>gi|223944961|gb|ACN26564.1| unknown [Zea mays]
gi|413933312|gb|AFW67863.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 734
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + + GY++
Sbjct: 280 SEKTLEEMTERDWRIFREDFNISYKGSRIPRPMRKWSE--SKLGTE--LLRAIDKAGYEK 335
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 336 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
>gi|392597064|gb|EIW86386.1| P-loop containing nucleoside triphosphate hydrolase protein
[Coniophora puteana RWD-64-598 SS2]
Length = 542
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 59/197 (29%), Positives = 96/197 (48%), Gaps = 27/197 (13%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSF------VKKRKRK 63
G+ FDK++F +D F + ++ L SF +D + F KRK
Sbjct: 10 GGIKFDKQRFKSDVQLFNPTQNTD-LKTKASFAASNDSDLPTELDFFKYAQGGSSKRKPD 68
Query: 64 SIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVS 123
+G ++ +++ A D E +EDG A++E I + +
Sbjct: 69 DRSGPLLK-------RRKMGGASDDEGSDIEDG---AQEEPGPSIAQ--------RVTAK 110
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G++VP ++F L R+ S LL+NL E G++ PT IQ IP+LL R+ A +PTG
Sbjct: 111 GSDVPESAQSFESLHDRYELPSQLLKNLKENGFRHPTGIQSHGIPILLESRDLAAISPTG 170
Query: 184 SGKTLAFLCPM--LMKL 198
+GKTL+++ P+ L+KL
Sbjct: 171 TGKTLSYILPVFSLLKL 187
>gi|221504668|gb|EEE30341.1| ATP-dependent RNA helicase, putative [Toxoplasma gondii VEG]
Length = 522
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/119 (40%), Positives = 68/119 (57%), Gaps = 12/119 (10%)
Query: 88 KEKEKVEDG----PSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
+EKE ED +K ++E+N ERD +FR+ + I++ G VP P+RT+ + S
Sbjct: 55 REKEDAEDNRGHWTTKKREEMN---ERDWRIFREDFEIYIKGGRVPPPIRTWAE--SALP 109
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
E L+ + Y PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 110 WE--LIEAVKHANYDRPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGL 166
>gi|15232722|ref|NP_187573.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
gi|75337164|sp|Q9SF41.1|RH45_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 45
gi|6682258|gb|AAF23310.1|AC016661_35 putative RNA helicase [Arabidopsis thaliana]
gi|332641267|gb|AEE74788.1| DEAD-box ATP-dependent RNA helicase 45 [Arabidopsis thaliana]
Length = 989
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 61/95 (64%), Gaps = 6/95 (6%)
Query: 107 QIERDAV--FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
++ +DAV +RK+ + V G +VP P++ + + G S +L L +L Y++P PIQ
Sbjct: 369 RMTQDAVNAYRKELELKVHGKDVPRPIQFW----HQTGLTSKILDTLKKLNYEKPMPIQA 424
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
QA+P+++S R+C A TGSGKTL F+ PML ++
Sbjct: 425 QALPIIMSGRDCIGVAKTGSGKTLGFVLPMLRHIK 459
>gi|226510036|ref|NP_001147911.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195614524|gb|ACG29092.1| ATP-dependent RNA helicase DDX23 [Zea mays]
Length = 736
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + + GY++
Sbjct: 282 SEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSE--SKLGTE--LLRAIDKAGYEK 337
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 338 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 374
>gi|300120104|emb|CBK19658.2| unnamed protein product [Blastocystis hominis]
Length = 620
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 55/148 (37%), Positives = 76/148 (51%), Gaps = 20/148 (13%)
Query: 59 KRKRKSIAGETVEGFNVFKSSKQLVPAVDKEK-EKVE---------DGPSKAKKELNKQI 108
+R+R A + E N +QLV + K + EK E G ++KEL
Sbjct: 100 ERERTIPASQNAEELN-----RQLVETIHKRQMEKDETASVRSGAGHGSHWSEKELKDMT 154
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
+RD + ++ + I V GA +PLR + S +LR + LG+KEPTPIQRQAI
Sbjct: 155 QRDWRIMKEDFEIRVQGAKQINPLRFW----SEAAVHPAILRAIETLGFKEPTPIQRQAI 210
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPML 195
P+ L + A TGSGKT AF+ PML
Sbjct: 211 PIELKGMDMIGIAKTGSGKTCAFVVPML 238
>gi|242033243|ref|XP_002464016.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
gi|241917870|gb|EER91014.1| hypothetical protein SORBIDRAFT_01g010590 [Sorghum bicolor]
Length = 750
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + + GY++
Sbjct: 296 SEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSE--SKLGTE--LLRAIDKAGYEK 351
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 352 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 388
>gi|221481559|gb|EEE19941.1| DEAD-box helicase family protein [Toxoplasma gondii GT1]
Length = 1158
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 12/119 (10%)
Query: 88 KEKEKVEDG----PSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
+EKE ED +K ++E+N ERD +FR+ + I++ G VP P+RT+ + + +
Sbjct: 691 REKEDAEDNRGHWTTKKREEMN---ERDWRIFREDFEIYIKGGRVPPPIRTWAESALPW- 746
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L+ + Y PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 747 ---ELIEAVKHANYDRPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGL 802
>gi|237843843|ref|XP_002371219.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
gi|211968883|gb|EEB04079.1| DEAD-box ATP-dependent RNA helicase, putative [Toxoplasma gondii
ME49]
Length = 1158
Score = 81.3 bits (199), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 68/119 (57%), Gaps = 12/119 (10%)
Query: 88 KEKEKVEDG----PSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
+EKE ED +K ++E+N ERD +FR+ + I++ G VP P+RT+ + + +
Sbjct: 691 REKEDAEDNRGHWTTKKREEMN---ERDWRIFREDFEIYIKGGRVPPPIRTWAESALPW- 746
Query: 143 CESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L+ + Y PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 747 ---ELIEAVKHANYDRPTPIQMQAIPIALEQRDLIGIAETGSGKTAAFVLPMLTYVKGL 802
>gi|226490952|ref|NP_001152536.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|195657271|gb|ACG48103.1| ATP-dependent RNA helicase DDX23 [Zea mays]
gi|224030151|gb|ACN34151.1| unknown [Zea mays]
gi|414872390|tpg|DAA50947.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 1 [Zea mays]
gi|414872391|tpg|DAA50948.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
isoform 2 [Zea mays]
Length = 758
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ +NI G+ +P P+R + + S+ G E LLR + + GY++
Sbjct: 304 SEKALEEMTERDWRIFREDFNISYKGSRIPRPMRKWSE--SKLGTE--LLRAIDKAGYEK 359
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 360 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 396
>gi|242801276|ref|XP_002483729.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
gi|218717074|gb|EED16495.1| DEAD/DEAH box helicase, putative [Talaromyces stipitatus ATCC
10500]
Length = 803
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G +VP+P+R++ G LL + ++GY +
Sbjct: 330 SEKRLDQMRERDWRIFKEDFNISTKGGSVPNPMRSW----EESGLPRRLLDLVKQVGYTD 385
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQR AIP+ L R+ A TGSGKT +FL P+ + + L
Sbjct: 386 PTPIQRAAIPIALQSRDLIGVAVTGSGKTASFLLPLFVYISEL 428
>gi|429848159|gb|ELA23673.1| pre-mRNA-splicing atp-dependent rna helicase prp28 [Colletotrichum
gloeosporioides Nara gc5]
Length = 713
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 46/116 (39%), Positives = 70/116 (60%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVE-DGPSK--AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A D+ KE+ + G +K +KK L++ ERD +F++ + I G +P+P+R++
Sbjct: 241 ARDRAKERADRTGLTKHWSKKALDEMRERDWRIFKEDFGIATKGGLIPNPMRSW----QE 296
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G LL + ++GY EP+PIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 297 SGLPRRLLNIIDQVGYTEPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 352
>gi|297833724|ref|XP_002884744.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
gi|297330584|gb|EFH61003.1| hypothetical protein ARALYDRAFT_317764 [Arabidopsis lyrata subsp.
lyrata]
Length = 930
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RK+ + V G +VP P++ + + G S +L L +L Y +P PIQ QA+P+++S
Sbjct: 319 YRKELELKVHGKDVPRPIKAW----HQTGLTSKILDTLKKLNYVKPMPIQAQALPIIMSG 374
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+C A TGSGKTLAF+ PML ++
Sbjct: 375 RDCIGIANTGSGKTLAFVLPMLRHIK 400
>gi|356522085|ref|XP_003529680.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Glycine
max]
Length = 701
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ YNI G+ +P P+R++ + S+ E LL+ + + GYK
Sbjct: 248 SEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNE--SKLTSE--LLKAVEKAGYKT 303
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 304 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 340
>gi|156545118|ref|XP_001602070.1| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Nasonia
vitripennis]
Length = 821
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 46/110 (41%), Positives = 71/110 (64%), Gaps = 6/110 (5%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
+EK+K +D ++K +++ ERD +FR+ YNI + G +P P+R++ G
Sbjct: 349 EEKQKWDD-RHWSEKAIDEMTERDWRIFREDYNITIKGGRIPDPIRSW----KESGFPKE 403
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+L + ++GYK+ TPIQRQAIP+ L +R+ A TGSGKTLAFL P+L+
Sbjct: 404 ILDIIDKVGYKDLTPIQRQAIPIGLQNRDIIGVAETGSGKTLAFLIPLLL 453
>gi|430812346|emb|CCJ30211.1| unnamed protein product [Pneumocystis jirovecii]
Length = 891
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 75/132 (56%), Gaps = 7/132 (5%)
Query: 79 SKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVK 136
+KQL+ K+ ++ D ++K L ERD +F++ +NI G ++P+P+R +
Sbjct: 395 AKQLMDMEYKKSTRISWDDKHWSEKPLELMKERDWRIFKEDFNISSKGGSIPNPIRNW-- 452
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G +L + +GYKEP+PIQR AIP+ L +R+ A TGSGKT +F+ PML+
Sbjct: 453 --KESGLPKIILDMVEIVGYKEPSPIQRAAIPIGLQNRDIIGIAETGSGKTASFVLPMLV 510
Query: 197 KLRVLFIPFDYF 208
+ L P D +
Sbjct: 511 YISTL-PPLDEY 521
>gi|389614656|dbj|BAM20360.1| DEAD box ATP-dependent RNA helicase [Papilio polytes]
Length = 539
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 56/85 (65%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R K+ I VSG ++P+P++ FV+ + Y+++N++ +GYKEPTPIQ Q P+ +S
Sbjct: 88 YRNKHEITVSGLDIPNPIQHFVEGN----FPDYVMQNISNMGYKEPTPIQAQGWPIAMSG 143
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
A TGSGKTLA++ P ++ +
Sbjct: 144 HNLVGIAQTGSGKTLAYILPAIVHI 168
>gi|403224137|dbj|BAM42267.1| DEAD-box family helicase [Theileria orientalis strain Shintoku]
Length = 776
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+ ++ +RD +FR+ ++I++ G VP P+RT+ + S E LL ++ + GY +
Sbjct: 296 TQKKRSEMTDRDWRIFREDFDIYIKGGRVPPPIRTWAE--SPLPWE--LLESIKKAGYTK 351
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML +++L
Sbjct: 352 PTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKML 394
>gi|443924941|gb|ELU43883.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhizoctonia
solani AG-1 IA]
Length = 718
Score = 80.9 bits (198), Expect = 3e-13, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K LN+ ERD +FR+ ++I G N+P PLR++ + +L ++ +GY+E
Sbjct: 256 SDKPLNEMKERDWRIFREDFSIACRGGNIPFPLRSWTESE----IPQAILDVISAIGYEE 311
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQRQAIP+ L +R+ A TGSGKT +F+ PML+ ++ L
Sbjct: 312 PSPIQRQAIPIGLQNRDVIGIAETGSGKTASFVIPMLVYIQSL 354
>gi|340923930|gb|EGS18833.1| hypothetical protein CTHT_0054430 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 709
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 5/117 (4%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
V + KE+ G ++K+L + ERD +F++ + I G ++P+P+R + G
Sbjct: 229 VKQLKEQKNLGKHWSEKKLEEMKERDWRIFKENFGISTKGGSIPNPMRNW----EESGLP 284
Query: 145 SYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
LL + +GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 285 RRLLDIVYRVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 341
>gi|297744770|emb|CBI38032.3| unnamed protein product [Vitis vinifera]
Length = 797
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+L + ERD +FR+ +NI G+ +P P+R++V+ S+ E LL+ + GYK
Sbjct: 273 TEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWVE--SKLSTE--LLKAVERAGYKT 328
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 329 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 365
>gi|449663558|ref|XP_002166443.2| PREDICTED: probable ATP-dependent RNA helicase DDX23-like [Hydra
magnipapillata]
Length = 632
Score = 80.9 bits (198), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KEL++ +RD +F++ ++I G +P+P+R + S + +L + LGY +PT
Sbjct: 173 KELHEMTDRDWRIFKEDFSISAKGGKIPNPIRYWRDSS----LPNDILDVILSLGYTDPT 228
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PIQRQAIP+ L +R+ A TGSGKT AF+ P+L+ +
Sbjct: 229 PIQRQAIPIGLMNRDIIGIAETGSGKTAAFVIPLLVWI 266
>gi|170056673|ref|XP_001864136.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
gi|167876423|gb|EDS39806.1| DEAD-box ATP-dependent RNA helicase 57 [Culex quinquefasciatus]
Length = 572
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 36/74 (48%), Positives = 50/74 (67%), Gaps = 1/74 (1%)
Query: 127 VPSPLRTFVKLSSR-FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSG 185
VP P+ F +L+ + + L++N++E GY+ PTP+Q QAIPVLL ACAPTGSG
Sbjct: 130 VPDPVEGFQQLAGEPYNVSNQLIKNVSECGYRAPTPVQMQAIPVLLEGHPLHACAPTGSG 189
Query: 186 KTLAFLCPMLMKLR 199
KT AFL P++ L+
Sbjct: 190 KTAAFLIPIIHHLK 203
>gi|167533855|ref|XP_001748606.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772847|gb|EDQ86493.1| predicted protein [Monosiga brevicollis MX1]
Length = 698
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ RD +FR+ +NI G N+P PLR++ G +L+ + +LG++
Sbjct: 240 SEKPLDEMTNRDWRIFREDFNIACKGGNIPPPLRSW----DEAGLNPEMLKAIQKLGFEN 295
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQR AIP+ L++R+ A TGSGKTLAF+ P+L
Sbjct: 296 PTPIQRAAIPIGLNNRDIIGVAETGSGKTLAFVLPLL 332
>gi|156389356|ref|XP_001634957.1| predicted protein [Nematostella vectensis]
gi|156222046|gb|EDO42894.1| predicted protein [Nematostella vectensis]
Length = 794
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 53/81 (65%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NIHV G N P P++T+ ++ G + +L L + Y++PTPIQ QAIPV++S R+
Sbjct: 124 NIHVRGKNAPKPVKTW----AQTGVQLKILDVLKKNSYEKPTPIQAQAIPVIMSGRDMIG 179
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKTLAFL PM ++
Sbjct: 180 IAKTGSGKTLAFLIPMFRHIK 200
>gi|331238187|ref|XP_003331749.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309310739|gb|EFP87330.1| hypothetical protein PGTG_12914 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 834
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 67/97 (69%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K LN +RD +FR+ ++I G N+P+P+R++ + S+ + +L + E+GYKE
Sbjct: 365 SQKPLNAMRDRDWRIFREDFSIAARGGNIPNPMRSWEE--SKLPLQ--ILEIIDEVGYKE 420
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L++R+ A TGSGKT +F+ PML
Sbjct: 421 PSPIQRQAIPLGLNNRDLIGIAETGSGKTASFVIPML 457
>gi|401887919|gb|EJT51893.1| Pre-mRNA splicing factor RNA helicase PRP28 [Trichosporon asahii
var. asahii CBS 2479]
Length = 707
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L ERD +FR+ YNI G N+P PLR++ + + +L + ++GY E
Sbjct: 249 SEKPLGDMKERDWRIFREDYNISSRGGNIPLPLRSWRESA----IPGPILDVVDQIGYTE 304
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AFL PML
Sbjct: 305 PSPIQRQAIPIGLQNRDLVGIAKTGSGKTAAFLIPML 341
>gi|353237317|emb|CCA69293.1| probable ROK1-ATP-dependent RNA helicase [Piriformospora indica DSM
11827]
Length = 561
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 62/207 (29%), Positives = 93/207 (44%), Gaps = 41/207 (19%)
Query: 7 FLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIA 66
L GV+F+KKK+ D + F G++ P R +
Sbjct: 6 LLARGVTFNKKKYEADISLFSN---------------GQRETP------------RPVAS 38
Query: 67 GETVEGFNVFKSSK----QLVPAVDKEKEKVEDG-----PSKAKK----ELNKQIERDAV 113
GE + FK +K Q+ +V K E G PSK +K + + +IE
Sbjct: 39 GELPASLDFFKYAKGGTQQIKTSVAKPIEASGSGNNQQIPSKKRKRDMDDSDSEIEHYP- 97
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+ + + G VP+ TFV++ RF ++RNL GY EPT IQ IP+L
Sbjct: 98 SKLPHRVTTKGERVPARAETFVEMQKRFSIAGNVMRNLDGCGYSEPTAIQTVGIPILAEG 157
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV 200
R+ A +PTG+GKTLA+L P+ +L+
Sbjct: 158 RDLAAVSPTGTGKTLAYLLPIFARLKT 184
>gi|15218071|ref|NP_173516.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|108861895|sp|Q8H0U8.2|RH42_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 42
gi|4836896|gb|AAD30599.1|AC007369_9 Similar to RNA helicases [Arabidopsis thaliana]
gi|332191919|gb|AEE30040.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 1166
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+RK+ + V G +VP P +K + G S +L + +L Y++P PIQ QA+P+++S
Sbjct: 510 TYRKELELKVHGKDVPRP----IKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS 565
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+C A TGSGKTL F+ PML ++
Sbjct: 566 GRDCIGVAKTGSGKTLGFVLPMLRHIK 592
>gi|346979571|gb|EGY23023.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
dahliae VdLs.17]
Length = 683
Score = 80.5 bits (197), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 57/102 (55%), Gaps = 5/102 (4%)
Query: 96 GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
G K LN+ RD +F++ + I G +P+P+R + G S LL + +
Sbjct: 221 GKRWTDKALNEMTARDWRIFKEDFGIATKGGAIPNPMRNW----DESGLPSRLLDIVHRV 276
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
GY EPTPIQR AIP+ L R+ A TGSGKT +FL P+L+
Sbjct: 277 GYNEPTPIQRAAIPIALQARDLIGVAVTGSGKTASFLLPLLV 318
>gi|406699425|gb|EKD02628.1| Pre-mRNA splicing factor RNA helicase PRP28 [Trichosporon asahii
var. asahii CBS 8904]
Length = 707
Score = 80.5 bits (197), Expect = 4e-13, Method: Composition-based stats.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L ERD +FR+ YNI G N+P PLR++ + + +L + ++GY E
Sbjct: 249 SEKPLGDMKERDWRIFREDYNISSRGGNIPLPLRSWRESA----IPGPILDVVDQIGYTE 304
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AFL PML
Sbjct: 305 PSPIQRQAIPIGLQNRDLVGIAKTGSGKTAAFLIPML 341
>gi|220681312|gb|ACL80032.1| vasa-like protein [Bombyx mori]
Length = 601
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P P+ +F + R Y+L N+ + GY++PTPIQ+ AIP+++S R+ C
Sbjct: 168 VKVSGENPPGPIESFETANLR----KYVLDNVLKAGYRKPTPIQKNAIPIMMSGRDLMGC 223
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCE 210
A TGSGKT AFL P++ L L P D E
Sbjct: 224 AQTGSGKTAAFLVPIINML--LQDPKDLISE 252
>gi|168828898|gb|ACA33927.1| vasa [Salvelinus leucomaenis]
Length = 662
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 60/92 (65%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + F + + CES L RN+++ GYK+PTP+Q+ IP++ + R+ AC
Sbjct: 214 VDVSGSNPPKAIMGFEEAAL---CES-LNRNVSKSGYKKPTPVQKHGIPIIAAGRDLMAC 269
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT+AFL P+L +L V + F E+
Sbjct: 270 AQTGSGKTVAFLLPILQQLMVDGVAASKFSEV 301
>gi|312380576|gb|EFR26532.1| hypothetical protein AND_07336 [Anopheles darlingi]
Length = 608
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 47/109 (43%), Positives = 62/109 (56%), Gaps = 7/109 (6%)
Query: 97 PSKAKKELNKQIERDAV--FRKKYNIHVSGA----NVPSPLRTFVKLSSRFGCESYLLRN 150
P E +Q+ R V RK I++ A NVP + +F +LSS + + L+ N
Sbjct: 97 PKTMSAETQEQMRRCRVKSLRKANKIYIKKAKKSPNVPDVIESFEELSSVYKVSNRLVAN 156
Query: 151 LAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+A Y PTP+Q QAIPVLL + ACAPTGSGKT AFL P+L L+
Sbjct: 157 IAAC-YSAPTPVQMQAIPVLLHETSLHACAPTGSGKTAAFLIPILHHLK 204
>gi|356565647|ref|XP_003551050.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 1
[Glycine max]
gi|356565649|ref|XP_003551051.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like isoform 2
[Glycine max]
Length = 706
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ YNI G+ +P P+R++ + S+ E LL+ + + GYK
Sbjct: 253 SEKKLEEMTERDWRIFREDYNISYKGSKIPRPMRSWNE--SKLTNE--LLKAVEKAGYKT 308
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 309 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 345
>gi|358366223|dbj|GAA82844.1| dead box ATP-dependent rna helicase [Aspergillus kawachii IFO 4308]
Length = 1430
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL---- 154
++K+L ERD +F++ +NI G +VP+P+R++ ES L + L EL
Sbjct: 959 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWE--------ESNLPKRLMELISRV 1010
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
GYKEPTPIQR AIP+ + +R+ A TGSGKT AFL P+L
Sbjct: 1011 GYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLL 1051
>gi|58259181|ref|XP_567003.1| Pre-mRNA splicing factor RNA helicase PRP28 [Cryptococcus
neoformans var. neoformans JEC21]
gi|134107275|ref|XP_777522.1| hypothetical protein CNBA6450 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338819230|sp|P0CQ89.1|PRP28_CRYNB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|338819231|sp|P0CQ88.1|PRP28_CRYNJ RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|50260216|gb|EAL22875.1| hypothetical protein CNBA6450 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57223140|gb|AAW41184.1| Pre-mRNA splicing factor RNA helicase PRP28, putative [Cryptococcus
neoformans var. neoformans JEC21]
Length = 738
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ ERD +FR+ ++I G +P PLR + + + S +L + E+GYKE
Sbjct: 282 SDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESA----IPSQILDIIEEIGYKE 337
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ + +R+ A TGSGKT AF+ PML
Sbjct: 338 PSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPML 374
>gi|449484526|ref|XP_004156907.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
21-like [Cucumis sativus]
Length = 715
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ +NI G+ +P P+R++ + S+ E LL+ + GYK
Sbjct: 262 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTE--SKLTTE--LLKAVERAGYKS 317
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 318 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 354
>gi|357495749|ref|XP_003618163.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493178|gb|AES74381.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 666
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + ERD +FR+ YNI G+ +P P+R++V+ S+ E +L+ + + GYK
Sbjct: 215 SEKNLEEMQERDWRIFREDYNISYKGSKIPRPIRSWVE--SKLSQE--ILKAVEKAGYKT 270
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ +IP+ L R+ A TGSGKT AF+ PML
Sbjct: 271 PSPIQMASIPLGLQQRDVIGVAETGSGKTAAFVLPML 307
>gi|392866896|gb|EAS29922.2| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
immitis RS]
Length = 827
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GYK+
Sbjct: 354 SQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----GESGLPKRLLEIIDKVGYKD 409
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 410 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 447
>gi|442570033|sp|Q1DMX8.2|PRP28_COCIM RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 820
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GYK+
Sbjct: 347 SQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----GESGLPKRLLEIIDKVGYKD 402
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 403 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 440
>gi|320033151|gb|EFW15100.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coccidioides
posadasii str. Silveira]
Length = 820
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GYK+
Sbjct: 347 SQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----GESGLPKRLLEIIDKVGYKD 402
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 403 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 440
>gi|449455778|ref|XP_004145628.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Cucumis
sativus]
Length = 715
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ +NI G+ +P P+R++ + S+ E LL+ + GYK
Sbjct: 262 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWTE--SKLTTE--LLKAVERAGYKS 317
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 318 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 354
>gi|303320765|ref|XP_003070377.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
gi|240110073|gb|EER28232.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28, putative
[Coccidioides posadasii C735 delta SOWgp]
Length = 827
Score = 80.1 bits (196), Expect = 5e-13, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GYK+
Sbjct: 354 SQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----GESGLPKRLLEIIDKVGYKD 409
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 410 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 447
>gi|85683111|gb|ABC73531.1| CG5589 [Drosophila miranda]
Length = 356
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 38/81 (46%), Positives = 51/81 (62%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+I G N+P+P+ +F L + L +N+ G+ +PTPIQ QA+PVL R A
Sbjct: 1 SITALGKNIPAPVLSFDDLIRDYKLLPRLQKNVLSYGFSQPTPIQMQALPVLFQKRALMA 60
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
CAPTGSGKTLAFL P++ LR
Sbjct: 61 CAPTGSGKTLAFLTPIINGLR 81
>gi|320583326|gb|EFW97541.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ogataea
parapolymorpha DL-1]
Length = 533
Score = 80.1 bits (196), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 63/114 (55%), Gaps = 8/114 (7%)
Query: 84 PAVDKEKEKVE---DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSS 139
P VD + + + D ++KEL+K +RD + R+ YNI G + +PLR +
Sbjct: 76 PIVDLPRRRHDLEFDDVHWSEKELSKMTDRDWRIMREDYNISTKGGKLENPLRKW----E 131
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
+L+ L LGY EPTPIQR A+P L+ R+ A TGSGKTLAFL P
Sbjct: 132 ESQISPLILQQLEALGYTEPTPIQRAAVPNGLTGRDLVGIAETGSGKTLAFLIP 185
>gi|405118039|gb|AFR92814.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Cryptococcus
neoformans var. grubii H99]
Length = 738
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ ERD +FR+ ++I G +P PLR + + + S +L + E+GYKE
Sbjct: 282 SDKPLDEMKERDWRIFREDFSIAARGGGIPHPLRNWRESA----IPSQILDIIEEIGYKE 337
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ + +R+ A TGSGKT AF+ PML
Sbjct: 338 PSPIQRQAIPIGMQNRDLIGIAKTGSGKTAAFVIPML 374
>gi|119179097|ref|XP_001241172.1| hypothetical protein CIMG_08335 [Coccidioides immitis RS]
Length = 817
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 64/98 (65%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ G LL + ++GYK+
Sbjct: 344 SQKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----GESGLPKRLLEIIDKVGYKD 399
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 400 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 437
>gi|156084736|ref|XP_001609851.1| DEAD box RNA helicase [Babesia bovis T2Bo]
gi|154797103|gb|EDO06283.1| DEAD box RNA helicase, putative [Babesia bovis]
Length = 714
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 43/104 (41%), Positives = 66/104 (63%), Gaps = 6/104 (5%)
Query: 98 SKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
+K K+ + ++ R +FR+ ++I+V G VP P+RT+ + + S LLR + + G+K
Sbjct: 265 AKTKENMTQRDWR--IFREDFDIYVKGTRVPPPMRTWAESN----LPSELLRAIKDAGFK 318
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT+AF+ PML ++ L
Sbjct: 319 SPTPIQMQAIPIGLGMRDLIGLAETGSGKTVAFVLPMLTYVKAL 362
>gi|115397801|ref|XP_001214492.1| hypothetical protein ATEG_05314 [Aspergillus terreus NIH2624]
gi|121738078|sp|Q0CLX0.1|PRP28_ASPTN RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|114192683|gb|EAU34383.1| hypothetical protein ATEG_05314 [Aspergillus terreus NIH2624]
Length = 783
Score = 80.1 bits (196), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/98 (42%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ + G S LL + +GYK+
Sbjct: 310 SEKKLEHMRERDWRIFKEDFNIATKGGSVPNPMRSW----AESGLPSRLLDLVHRVGYKD 365
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQR AIP+ + R+ A TGSGKT AFL P+L+
Sbjct: 366 PTPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLV 403
>gi|389742318|gb|EIM83505.1| P-loop containing nucleoside triphosphate hydrolase protein
[Stereum hirsutum FP-91666 SS1]
Length = 584
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 34/84 (40%), Positives = 52/84 (61%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A R K + G+NVP+ TF L+ R+ ++ N+AE GY+ PT IQ IP+L+
Sbjct: 115 APLRPKQRVTAKGSNVPAAADTFEDLAKRYHIPPLIVSNIAEYGYQYPTGIQSHGIPILM 174
Query: 172 SDRECFACAPTGSGKTLAFLCPML 195
R+ A +PTG+GKTL++L P++
Sbjct: 175 ESRDLAAISPTGTGKTLSYLLPLM 198
>gi|185134419|ref|NP_001117665.1| Vasa [Oncorhynchus mykiss]
gi|6521014|dbj|BAA88059.1| Vasa [Oncorhynchus mykiss]
Length = 647
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + F + + CES L RN+++ GYK+PTP+Q+ IP++ + R+ AC
Sbjct: 199 VDVSGSNPPKAIMGFEEAAL---CES-LNRNISKSGYKKPTPVQKHGIPIIAAGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L V + F E+
Sbjct: 255 AQTGSGKTAAFLLPILQQLMVDGVAASQFSEI 286
>gi|126644819|ref|XP_001388126.1| U5 snRNP 100 kD protein [Cryptosporidium parvum Iowa II]
gi|126117354|gb|EAZ51454.1| U5 snRNP 100 kD protein, putative [Cryptosporidium parvum Iowa II]
gi|323509541|dbj|BAJ77663.1| cgd3_3690 [Cryptosporidium parvum]
Length = 529
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
ERD +FR+ Y+I+V G +VP+P+R + K ++ L+RN+ GY++PTPIQ Q I
Sbjct: 118 ERDWKIFREDYSINVRGKDVPNPIRNW-KDCHVLEIQTELIRNI---GYEKPTPIQMQCI 173
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPML 195
P+ L R+ A TGSGKT+AFL P++
Sbjct: 174 PIGLKLRDMIGIAETGSGKTIAFLIPLI 201
>gi|112983588|ref|NP_001037347.1| vasa-like [Bombyx mori]
gi|1944405|dbj|BAA19572.1| BmVLG [Bombyx mori]
Length = 601
Score = 79.7 bits (195), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 56/91 (61%), Gaps = 6/91 (6%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P P+ +F + R Y+L N+ + GY++PTPIQ+ AIP+++S R+ C
Sbjct: 168 VKVSGENPPRPIESFETANLR----KYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGC 223
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCE 210
A TGSGKT AFL P++ L L P D E
Sbjct: 224 AQTGSGKTAAFLVPIINML--LQDPKDLISE 252
>gi|147774689|emb|CAN74342.1| hypothetical protein VITISV_005473 [Vitis vinifera]
Length = 661
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+L + ERD +FR+ +N+ G+ +P P+R++V+ S+ E LL+ + GYK
Sbjct: 226 TEKKLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVE--SKLSPE--LLKAVERAGYKT 281
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 282 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 318
>gi|209490759|gb|ACI49632.1| vasa-like protein [Bombyx mori]
Length = 496
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P PL +F + R Y+L N+ + GY++PTPIQ+ AIP+++S R+ C
Sbjct: 168 VKVSGENPPRPLESFETANLR----KYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGC 223
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ L
Sbjct: 224 AQTGSGKTAAFLVPIINML 242
>gi|225443496|ref|XP_002270644.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 21-like [Vitis
vinifera]
Length = 709
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+L + ERD +FR+ +N+ G+ +P P+R++V+ S+ E LL+ + GYK
Sbjct: 256 TEKKLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVE--SKLSPE--LLKAVERAGYKT 311
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 312 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 348
>gi|302759400|ref|XP_002963123.1| hypothetical protein SELMODRAFT_165735 [Selaginella moellendorffii]
gi|302796878|ref|XP_002980200.1| hypothetical protein SELMODRAFT_153756 [Selaginella moellendorffii]
gi|300151816|gb|EFJ18460.1| hypothetical protein SELMODRAFT_153756 [Selaginella moellendorffii]
gi|300169984|gb|EFJ36586.1| hypothetical protein SELMODRAFT_165735 [Selaginella moellendorffii]
Length = 574
Score = 79.7 bits (195), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +FR+ +NI G+ +P P+R + G + LL+ + + GYK
Sbjct: 121 SEKKLEDMTERDWRIFREDFNISYKGSRIPRPMRNW----EEGGLSTELLKAVNKAGYKN 176
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 177 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 213
>gi|299470469|emb|CBN78461.1| DEAD box helicase [Ectocarpus siliculosus]
Length = 1012
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 61/197 (30%), Positives = 97/197 (49%), Gaps = 27/197 (13%)
Query: 4 GASFLFAGVSFDKKK----FVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKK 59
G +L AG+ +++ F+T ++ ++ A D S +K D E+A
Sbjct: 461 GRGYL-AGIDMREQRKESAFLTALMEKRQEEQRRAEAADHSLTAQDKADRERA------- 512
Query: 60 RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRKKY 118
+ + +A VE F+ L A + V G ++K L + ERD +FR+ +
Sbjct: 513 -REQQMA--EVEAFS-------LAEADGMGDDPVLKGAHWSEKPLAEMAERDWRIFREDF 562
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+I V G P PLR + + S ++ + ELGY++P+PIQRQAIP+ + R+
Sbjct: 563 DIRVKGGKAPLPLRFWEEGH----LPSSVMEAIRELGYEKPSPIQRQAIPIGMERRDIIG 618
Query: 179 CAPTGSGKTLAFLCPML 195
A TGSGKT AF PM+
Sbjct: 619 IAETGSGKTAAFGIPMI 635
>gi|321249945|ref|XP_003191631.1| pre-mRNA splicing factor RNA helicase PRP28 [Cryptococcus gattii
WM276]
gi|317458098|gb|ADV19844.1| Pre-mRNA splicing factor RNA helicase PRP28, putative [Cryptococcus
gattii WM276]
Length = 737
Score = 79.7 bits (195), Expect = 8e-13, Method: Composition-based stats.
Identities = 43/103 (41%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 94 EDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+D + K L++ ERD +FR+ ++I G +P PLR + + + S +L +
Sbjct: 276 DDDRHWSDKPLDEMKERDWRIFREDFSIVARGGGIPYPLRNWRESA----IPSQILDIIE 331
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
E+GYKEP+PIQRQAIP+ + +R+ A TGSGKT AF+ PML
Sbjct: 332 EIGYKEPSPIQRQAIPIGMQNRDLIGVAKTGSGKTAAFVIPML 374
>gi|361128429|gb|EHL00364.1| putative Pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Glarea
lozoyensis 74030]
Length = 728
Score = 79.7 bits (195), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ G LL +A++GY E
Sbjct: 252 SEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSW----QESGLPKRLLDVVAQVGYDE 307
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+ +QR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 308 PSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 350
>gi|195030246|ref|XP_001987979.1| GH10918 [Drosophila grimshawi]
gi|193903979|gb|EDW02846.1| GH10918 [Drosophila grimshawi]
Length = 1791
Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 44/105 (41%), Positives = 61/105 (58%), Gaps = 7/105 (6%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
P+ + E+ + KY+ I V+G NVP P+R+F R S +L N+ +
Sbjct: 144 PTNDETEMFSTAISSGINFSKYDNIPIKVTGDNVPKPIRSFEGAQLR----SIVLNNVIK 199
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GYK PTPIQ+ ++PV+ R+ ACA TGSGKT AFL PM+ KL
Sbjct: 200 SGYKVPTPIQKVSMPVISEGRDLMACAQTGSGKTAAFLLPMICKL 244
>gi|378725910|gb|EHY52369.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Exophiala
dermatitidis NIH/UT8656]
Length = 835
Score = 79.3 bits (194), Expect = 8e-13, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 66/103 (64%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G +P+P+R++ G LL+ + ++GYK+
Sbjct: 357 SEKRLDQMRERDWRIFKEDFNISTKGGGIPNPMRSW----QESGLPRRLLQIVEQVGYKD 412
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 413 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISEL 455
>gi|396925114|gb|AFN89215.1| vasa, partial [Solea senegalensis]
Length = 351
Score = 79.3 bits (194), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 199 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 255 AQTGSGKTAAFLLPMLQRLMADGVAGSRFSEL 286
>gi|386436506|gb|AFH41530.1| vasa [Salmo salar]
Length = 653
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 59/92 (64%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P+ + F + + CES L RN+ + GYK+PTP+Q+ IP++ + R+ AC
Sbjct: 205 VDVSGSNPPTAIMGFEEAAL---CES-LNRNVIKSGYKKPTPVQKHGIPIIAAGRDLMAC 260
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L V + F E+
Sbjct: 261 AQTGSGKTAAFLLPILQQLMVDGVAASQFSEI 292
>gi|302853426|ref|XP_002958228.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
gi|300256416|gb|EFJ40682.1| hypothetical protein VOLCADRAFT_77867 [Volvox carteri f.
nagariensis]
Length = 574
Score = 79.3 bits (194), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 73/139 (52%), Gaps = 9/139 (6%)
Query: 60 RKRKSIAG--ETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRK 116
RK +S AG ET E + K+L D ++E +K L + ERD +FR+
Sbjct: 82 RKARSAAGLVETAETREHDRERKRLADQYDGFDMRIEK--HWTEKSLEEMTERDWRIFRE 139
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
+NI G N P+R + G S L++ + +GYK+P+PIQ AIP+ L R+
Sbjct: 140 DFNIGYRGVNTVLPIRKW----EESGLPSLLIKAIDRVGYKKPSPIQMAAIPLGLQQRDV 195
Query: 177 FACAPTGSGKTLAFLCPML 195
A TGSGKT AF+ PML
Sbjct: 196 IGIAETGSGKTAAFVLPML 214
>gi|145257496|ref|XP_001401758.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
niger CBS 513.88]
gi|143359821|sp|A2QIL2.1|PRP28_ASPNC RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|134058672|emb|CAK38656.1| unnamed protein product [Aspergillus niger]
Length = 810
Score = 79.3 bits (194), Expect = 9e-13, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL---- 154
++K+L ERD +F++ +NI G +VP+P+R++ ES L + L EL
Sbjct: 339 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWD--------ESNLPKRLMELINRV 390
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
GYKEPTPIQR AIP+ + +R+ A TGSGKT AFL P+L
Sbjct: 391 GYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLL 431
>gi|324507437|gb|ADY43153.1| ATP-dependent RNA helicase DDX52 [Ascaris suum]
Length = 593
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 61/109 (55%), Gaps = 6/109 (5%)
Query: 93 VEDGPSKAKKELNKQI---ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLR 149
++DG K K E K+I E+ R+ I+ G N+P P F L G LL+
Sbjct: 85 LKDGKKKIKFEERKRILHSEKVNRLRRLNRIYTWGDNIPDPCINFTDLK---GIPKELLK 141
Query: 150 NLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
NL E EP+PIQ QA+P++ R+ A APTGSGKTLAF P+++ +
Sbjct: 142 NLNEFDINEPSPIQMQAMPIMHERRDLLASAPTGSGKTLAFAIPIILDI 190
>gi|297845068|ref|XP_002890415.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
gi|297336257|gb|EFH66674.1| hypothetical protein ARALYDRAFT_472328 [Arabidopsis lyrata subsp.
lyrata]
Length = 827
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+RK+ + V G +VP P +K + G S +L + +L Y++P PIQ QA+P+++S
Sbjct: 172 TYRKELELKVHGKDVPRP----IKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS 227
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+C A TGSGKTL F+ PML ++
Sbjct: 228 GRDCIGVAKTGSGKTLGFVLPMLRHIK 254
>gi|452980378|gb|EME80139.1| hypothetical protein MYCFIDRAFT_177115 [Pseudocercospora fijiensis
CIRAD86]
Length = 1001
Score = 79.3 bits (194), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R + G +L + ++GYKE
Sbjct: 349 SEKKLESMRERDWRIFKEDFNIATKGGSIPNPMRRW----DESGLPKRILDIVEQVGYKE 404
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L
Sbjct: 405 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLL 441
>gi|396925116|gb|AFN89216.1| vasa, partial [Solea senegalensis]
Length = 351
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 199 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 255 AQTGSGKTAAFLLPMLQRLMADGVASSRFSEL 286
>gi|340375196|ref|XP_003386122.1| PREDICTED: probable ATP-dependent RNA helicase DDX23 [Amphimedon
queenslandica]
Length = 804
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 52/144 (36%), Positives = 77/144 (53%), Gaps = 9/144 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE----DGPSKAKKELNKQIERD-A 112
+KR++ +E + KQ K++EK + D +K+L++ +RD
Sbjct: 294 QKREQSKFYSNLLESRRTDEEKKQAEENESKKREKEDKIKWDERHWTEKKLDEMTDRDWR 353
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+FR+ YNI G VP P+R + S G + + LGYKEPT IQRQAIP+ L
Sbjct: 354 IFREDYNITTKGGRVPHPIRYW----SEGGLPEKITDVIRGLGYKEPTAIQRQAIPIGLQ 409
Query: 173 DRECFACAPTGSGKTLAFLCPMLM 196
+R+ A TGSGKT AF+ P+L+
Sbjct: 410 NRDIIGIAETGSGKTAAFVIPLLV 433
>gi|350632267|gb|EHA20635.1| hypothetical protein ASPNIDRAFT_190556 [Aspergillus niger ATCC
1015]
Length = 795
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 45/101 (44%), Positives = 63/101 (62%), Gaps = 13/101 (12%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL---- 154
++K+L ERD +F++ +NI G +VP+P+R++ ES L + L EL
Sbjct: 324 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSWD--------ESNLPKRLMELINRV 375
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
GYKEPTPIQR AIP+ + +R+ A TGSGKT AFL P+L
Sbjct: 376 GYKEPTPIQRAAIPIAMQNRDLIGVAVTGSGKTAAFLLPLL 416
>gi|220681310|gb|ACL80031.1| vasa-like protein [Bombyx mori]
Length = 468
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P P+ +F + R Y+L N+ + GY++PTPIQ+ AIP+++S R+ C
Sbjct: 35 VKVSGENPPRPIESFKTANLR----KYVLDNVLKAGYRKPTPIQKNAIPIIMSGRDLMGC 90
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ L
Sbjct: 91 AQTGSGKTAAFLVPIINML 109
>gi|328859802|gb|EGG08910.1| hypothetical protein MELLADRAFT_34708 [Melampsora larici-populina
98AG31]
Length = 765
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 66/97 (68%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L ERD +FR+ ++I G N+P+P+R++ + S+ + +L + E+GYKE
Sbjct: 275 SQKPLEAMRERDWRIFREDFSIAARGGNIPNPMRSWDE--SKIPMQ--ILEIIDEVGYKE 330
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L++R+ A TGSGKT +F+ PML
Sbjct: 331 PSPIQRQAIPLGLNNRDLIGIAETGSGKTASFVIPML 367
>gi|150863785|ref|XP_001382380.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
gi|158514818|sp|A3LNL1.2|PRP28_PICST RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|149385041|gb|ABN64351.2| pre-mRNA splicing factor RNA helicase of DEAD box family
[Scheffersomyces stipitis CBS 6054]
Length = 482
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 61/98 (62%), Gaps = 6/98 (6%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE-LGYK 157
++K L++ RD +FR+ Y I G ++ +PLRT+ + S S LL + + L Y
Sbjct: 23 SEKSLDQMTARDWRIFREDYGITSKGGDIDNPLRTWNEAS----IPSKLLSIIVDKLEYL 78
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
EPTPIQR AIP+ L+ R+ A TGSGKTLAFL P+L
Sbjct: 79 EPTPIQRAAIPLALNQRDVVGIAETGSGKTLAFLIPLL 116
>gi|145323964|ref|NP_001077571.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
gi|332191920|gb|AEE30041.1| DEAD-box ATP-dependent RNA helicase 42 [Arabidopsis thaliana]
Length = 828
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 54/87 (62%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+RK+ + V G +VP P +K + G S +L + +L Y++P PIQ QA+P+++S
Sbjct: 172 TYRKELELKVHGKDVPRP----IKFWHQTGLTSKILDTMKKLNYEKPMPIQTQALPIIMS 227
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+C A TGSGKTL F+ PML ++
Sbjct: 228 GRDCIGVAKTGSGKTLGFVLPMLRHIK 254
>gi|238491382|ref|XP_002376928.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
gi|220697341|gb|EED53682.1| DEAD/DEAH box helicase, putative [Aspergillus flavus NRRL3357]
Length = 665
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G L+ + ++GYKE
Sbjct: 215 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW----DESGLPKRLMELVNKVGYKE 270
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQR AIP+ + R+ A TGSGKT +FL P+L+
Sbjct: 271 PTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLV 308
>gi|297735665|emb|CBI18352.3| unnamed protein product [Vitis vinifera]
Length = 688
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+L + ERD +FR+ +N+ G+ +P P+R++V+ S+ E LL+ + GYK
Sbjct: 177 TEKKLEEMTERDWRIFREDFNVSYKGSKIPRPMRSWVE--SKLSPE--LLKAVERAGYKT 232
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 233 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 269
>gi|281206116|gb|EFA80305.1| putative RNA helicase [Polysphondylium pallidum PN500]
Length = 858
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/102 (42%), Positives = 64/102 (62%), Gaps = 13/102 (12%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNL----AEL 154
+KK+L ERD +FR+ +NI G+ +P+P+R++ ES L R + A++
Sbjct: 399 SKKDLKLMTERDWRIFREDFNISTKGSGIPNPMRSWR--------ESILPREILEAIAKM 450
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
GY++P+PIQ QAIP+ L R+ A TGSGKT AF+ PML+
Sbjct: 451 GYEKPSPIQMQAIPIALWGRDVLGIAETGSGKTAAFVIPMLV 492
>gi|302798402|ref|XP_002980961.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
gi|300151500|gb|EFJ18146.1| hypothetical protein SELMODRAFT_51367 [Selaginella moellendorffii]
Length = 653
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R+ + SG +VP P++ F +L G +S L+ + + GY+ PTPIQ QA+P++LS
Sbjct: 165 YRQSIGVRTSGFDVPRPVKQFKEL----GLDSLLMGAITKQGYENPTPIQCQALPIVLSG 220
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ PM++ +
Sbjct: 221 RDIIGIAKTGSGKTAAFVLPMIVHI 245
>gi|392595702|gb|EIW85025.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Coniophora
puteana RWD-64-598 SS2]
Length = 773
Score = 79.0 bits (193), Expect = 1e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ ERD +FR+ ++I G ++P PLR++ + +L + ++GYKE
Sbjct: 290 SDKPLDEMKERDWRIFREDFSIAARGGSIPHPLRSWAESE----IPEIILGVIEQVGYKE 345
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 346 PSPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPML 382
>gi|224083374|ref|XP_002307002.1| predicted protein [Populus trichocarpa]
gi|222856451|gb|EEE93998.1| predicted protein [Populus trichocarpa]
Length = 895
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/91 (38%), Positives = 56/91 (61%), Gaps = 4/91 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E +RK + + G +VP P++T+ + G S +L + +L Y++P IQ QA+P
Sbjct: 232 EEVTAYRKLLELKIHGKDVPKPIKTW----HQTGLTSKILETIKKLNYEKPMTIQAQALP 287
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 288 IIMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 318
>gi|449550561|gb|EMD41525.1| hypothetical protein CERSUDRAFT_146544 [Ceriporiopsis subvermispora
B]
Length = 575
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
++ + G NVP + +F L R+ + LL NL E GYK PT IQ IP+L+ R+
Sbjct: 106 RHRVTTKGNNVPEHVESFQALQERYALSNRLLTNLEESGYKRPTGIQSYGIPILMESRDL 165
Query: 177 FACAPTGSGKTLAFLCPMLMKL 198
A +PTG+GKTL++L P++ L
Sbjct: 166 AAISPTGTGKTLSYLLPVMASL 187
>gi|145351197|ref|XP_001419971.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580204|gb|ABO98264.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 575
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 4/103 (3%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K+L ERD +FR+ +NI G +P P+R + + +S +LR +A++GY++
Sbjct: 121 SDKKLEDMTERDWRIFREDFNISYKGGKLPLPMRAWKECTS---LPQEILRAIAQVGYEK 177
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQ +IP+ L R+ A TGSGKT AF+ PML + L
Sbjct: 178 PSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAHIMQL 220
>gi|393245555|gb|EJD53065.1| P-loop containing nucleoside triphosphate hydrolase protein
[Auricularia delicata TFB-10046 SS5]
Length = 756
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L +RD +FR+ ++I G +P PLR++ + +L + +GYKE
Sbjct: 277 SEKPLKDMKDRDWRIFREDFSISARGGQIPHPLRSWEESE----IPQQILDVIEGIGYKE 332
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQRQAIP+ L R+ A TGSGKT +F+ PML+ + L
Sbjct: 333 PSPIQRQAIPIGLQGRDLIGIAETGSGKTASFVIPMLVYISNL 375
>gi|384498823|gb|EIE89314.1| hypothetical protein RO3G_14025 [Rhizopus delemar RA 99-880]
Length = 674
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 53/90 (58%), Gaps = 4/90 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER ++ + VSG N+P P +F + FG + L+ + + GY EP+ IQRQAIP
Sbjct: 226 ERVKALLQEMGLRVSGYNIPKPCISF----AHFGFDEDLMNTIIKAGYTEPSAIQRQAIP 281
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
LS R+ A TGSGKT AF+ PML+ +
Sbjct: 282 AALSGRDVIGIAKTGSGKTAAFVLPMLIHI 311
>gi|255729782|ref|XP_002549816.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
gi|240132885|gb|EER32442.1| conserved hypothetical protein [Candida tropicalis MYA-3404]
Length = 571
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 59/94 (62%), Gaps = 5/94 (5%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K+L +RD +F++ YNI G N+P+PLR++ + S S L+ + +LG+ +PT
Sbjct: 127 KQLKDMTDRDWRIFKEDYNITTKGKNIPNPLRSWDESS----INSKLISIIYKLGFNQPT 182
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
IQR +IP+ L R+ A TGSGKTL+FL P+
Sbjct: 183 SIQRASIPLSLIKRDVVGVAETGSGKTLSFLIPL 216
>gi|294873155|ref|XP_002766532.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239867472|gb|EEQ99249.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 658
Score = 78.6 bits (192), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 63/107 (58%), Gaps = 5/107 (4%)
Query: 96 GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
G ++K+ ++ +RD +FR+ I++ G VP P RT+ + S E LL+ + E+
Sbjct: 291 GTHWSEKKSSEMTKRDWKIFREDMKIYLRGGRVPIPCRTWAE--SPLPVE--LLKAINEV 346
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
GY PTPIQ QAIPV + R+ A TGSGKT A++ PML + L
Sbjct: 347 GYIRPTPIQMQAIPVAMEQRDLIGIAETGSGKTAAYMLPMLTYVNAL 393
>gi|294933866|ref|XP_002780884.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239891011|gb|EER12679.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 546
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 106 KQIERDAVFRKKYNIHVSG-ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
+++E FRK+ I VSG +N P P+ TF S +L + + G+ +PTPIQ
Sbjct: 146 RRLEMANHFRKENRIGVSGTSNPPDPILTFDTDSDDDRVSKWLKEAMTKSGFPKPTPIQS 205
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
QAIP++L+ A APTGSGKTLAF+ P+L +L
Sbjct: 206 QAIPLMLTGDHLLAQAPTGSGKTLAFIVPLLQRL 239
>gi|396925118|gb|AFN89217.1| vasa, partial [Solea senegalensis]
Length = 342
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 190 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 245
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 246 AQTGSGKTAAFLLPMLQRLMADGVAGSRFSEL 277
>gi|396925108|gb|AFN89212.1| vasa [Solea senegalensis]
Length = 639
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 190 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 245
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 246 AQTGSGKTAAFLLPMLQRLMADGVAGSRFSEL 277
>gi|297826827|ref|XP_002881296.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
gi|297327135|gb|EFH57555.1| hypothetical protein ARALYDRAFT_902447 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGY 156
+ K L + ERD +FR+ +NI G+ +P P+R++ KL+S LL+ + GY
Sbjct: 278 SDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSE------LLKAVERAGY 331
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
K+P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 332 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 370
>gi|15226155|ref|NP_180929.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
gi|75319077|sp|P93008.1|RH21_ARATH RecName: Full=DEAD-box ATP-dependent RNA helicase 21
gi|1707017|gb|AAC69128.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|17473908|gb|AAL38370.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|20259792|gb|AAM13243.1| putative U5 small nuclear ribonucleoprotein, an RNA helicase
[Arabidopsis thaliana]
gi|330253781|gb|AEC08875.1| DEAD-box ATP-dependent RNA helicase 21 [Arabidopsis thaliana]
Length = 733
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 60/99 (60%), Gaps = 9/99 (9%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGY 156
+ K L + ERD +FR+ +NI G+ +P P+R++ KL+S LL+ + GY
Sbjct: 280 SDKRLEEMTERDWRIFREDFNISYKGSRIPRPMRSWEESKLTSE------LLKAVERAGY 333
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
K+P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 334 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 372
>gi|389748974|gb|EIM90151.1| P-loop containing nucleoside triphosphate hydrolase protein,
partial [Stereum hirsutum FP-91666 SS1]
Length = 809
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/96 (43%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 101 KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
+K L ERD +FR+ ++I G N+P PLR++++ + +L + +GYKEP
Sbjct: 350 EKPLEDMKERDWRIFREDFSIAARGGNIPHPLRSWLEST----IPQQILDVVDSVGYKEP 405
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 406 SPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 441
>gi|169773397|ref|XP_001821167.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Aspergillus
oryzae RIB40]
gi|91207407|sp|Q2UH00.1|PRP28_ASPOR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|83769028|dbj|BAE59165.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391866029|gb|EIT75307.1| U5 snRNP-like RNA helicase subunit [Aspergillus oryzae 3.042]
Length = 803
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +VP+P+R++ G L+ + ++GYKE
Sbjct: 334 SEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW----DESGLPKRLMELVNKVGYKE 389
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
PTPIQR AIP+ + R+ A TGSGKT +FL P+L+
Sbjct: 390 PTPIQRAAIPIAMQSRDLIGVAVTGSGKTASFLLPLLV 427
>gi|183979315|dbj|BAG30754.1| DEAD box polypeptide 5 [Papilio xuthus]
Length = 539
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R K+ I VSG ++P+P++ F Y+++N++ +GYKEPTPIQ Q P+ +S
Sbjct: 89 YRNKHEITVSGLDIPNPIQHF----EEGNFPDYVMQNISNMGYKEPTPIQAQGWPIAMSG 144
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
A TGSGKTLA++ P ++ +
Sbjct: 145 HNLVGIAQTGSGKTLAYILPAIVHI 169
>gi|392576681|gb|EIW69811.1| hypothetical protein TREMEDRAFT_38519 [Tremella mesenterica DSM
1558]
Length = 792
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ +RD +FR+ ++I G ++P PLR++ + + + +L + E+GYKE
Sbjct: 292 SDKPLSEMKDRDWRIFREDFSIQARGGSIPVPLRSWREST----IDPKVLNIIDEIGYKE 347
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L R+ A TGSGKT AF+ PML
Sbjct: 348 PSPIQRQAIPIGLQTRDLIGIAKTGSGKTAAFVIPML 384
>gi|15234166|ref|NP_195063.1| putative DEAD-box ATP-dependent RNA helicase 43 [Arabidopsis
thaliana]
gi|75337897|sp|Q9SZB4.1|RH43_ARATH RecName: Full=Putative DEAD-box ATP-dependent RNA helicase 43
gi|4490304|emb|CAB38795.1| putative protein [Arabidopsis thaliana]
gi|7270285|emb|CAB80054.1| putative protein [Arabidopsis thaliana]
gi|332660816|gb|AEE86216.1| putative DEAD-box ATP-dependent RNA helicase 43 [Arabidopsis
thaliana]
Length = 542
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 20/150 (13%)
Query: 48 DPEKAMVSFVKKRKRKSIAGETVEGFNVFKS-SKQLVPAVDKEKEKVEDGPSKAKKELNK 106
+P K M+ + +K+ GE G + S P P +K K
Sbjct: 27 EPGKGMMEHLSDKKKLMSVGELARGITYTEPLSTWWKP------------PLHVRKMSTK 74
Query: 107 QIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
Q++ + RK+++I V+G ++P P++ F+ + +F S LLR L + G PTPIQ Q
Sbjct: 75 QMD---LIRKQWHITVNGEDIPPPIKNFMDM--KF--PSPLLRMLKDKGIMHPTPIQVQG 127
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+PV+LS R+ A TGSGKTL F+ PM++
Sbjct: 128 LPVVLSGRDMIGIAFTGSGKTLVFVLPMII 157
>gi|396925110|gb|AFN89213.1| vasa [Solea senegalensis]
Length = 567
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 199 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 255 AQTGSGKTAAFLLPMLQRLMADGVASSRFSEL 286
>gi|443729582|gb|ELU15447.1| hypothetical protein CAPTEDRAFT_224580 [Capitella teleta]
Length = 648
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 51/143 (35%), Positives = 80/143 (55%), Gaps = 9/143 (6%)
Query: 58 KKRKRKSIAGETVEGFNVFKSSKQLVPAVDK----EKEKVEDGPSKAKKELNKQIERD-A 112
+K+++ GE +E Q V + K E ++ D ++K +++ ERD
Sbjct: 140 QKKEQSKFYGELLEQRRSNTEKDQEVVRLKKVAKREAKQRWDDRHWSEKPVDEMTERDWR 199
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
+F++ +NI G +P P+R + + S+ E LL + ++GY EPTPIQRQAIP+ L
Sbjct: 200 IFKEDFNIACKGGKIPQPIRNWRE--SKICTE--LLDIIEKIGYTEPTPIQRQAIPIGLQ 255
Query: 173 DRECFACAPTGSGKTLAFLCPML 195
+R+ A TGSGKT AFL P+L
Sbjct: 256 NRDIIGVAETGSGKTAAFLIPLL 278
>gi|400602905|gb|EJP70503.1| DEAD/DEAH box helicase [Beauveria bassiana ARSEF 2860]
Length = 732
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A DK +++ E G +K L++ ERD +F++ + I G +P+P+R +
Sbjct: 244 ARDKARDRAEKTGLGRRWNEKRLDEMRERDWRIFKEDFGISTKGGTLPNPMRNW----KE 299
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G S LL + ++GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 300 SGLPSRLLNIIEQVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 355
>gi|324502742|gb|ADY41204.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 973
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ +I V G N P P+R++ ++ G E +L L +L Y +PT IQ QAIP ++S
Sbjct: 295 YREELDIRVRGKNCPKPVRSW----AQCGVEWKILNTLKKLEYTKPTAIQAQAIPAIMSG 350
Query: 174 RECFACAPTGSGKTLAFLCPM 194
R+ A TGSGKTLAFL PM
Sbjct: 351 RDVIGIAKTGSGKTLAFLLPM 371
>gi|429329363|gb|AFZ81122.1| DEAD box ATP-dependent RNA helicase family member protein [Babesia
equi]
Length = 732
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/103 (40%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K+ +RD +FR+ ++I++ G VP P+RT+ + S E LL + + GY +
Sbjct: 278 TQKKREDMTDRDWRIFREDFDIYIRGGRVPPPIRTWAE--SPLPWE--LLEAIKKAGYSK 333
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 334 PTPIQMQAIPIALEMRDLIGIAVTGSGKTAAFVLPMLTYVKSL 376
>gi|409046062|gb|EKM55542.1| hypothetical protein PHACADRAFT_173680 [Phanerochaete carnosa
HHB-10118-sp]
Length = 668
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ ++I G +P PLR++ + LL + +GYKE
Sbjct: 208 SEKKLEEMRERDWRIFREDFSIASRGGQIPHPLRSWTESD----IPQLLLDVIERIGYKE 263
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 264 PSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 300
>gi|348686378|gb|EGZ26193.1| hypothetical protein PHYSODRAFT_555670 [Phytophthora sojae]
Length = 698
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 54/91 (59%), Gaps = 5/91 (5%)
Query: 113 VFRKKYNIHVSGANVPSPLRTF--VKLSSRFGCESY---LLRNLAELGYKEPTPIQRQAI 167
+ R++ I VSG +VP+P+ F +++ S + LL+N+ YKEPT +Q QAI
Sbjct: 227 MLRRQLGIRVSGVSVPAPITAFADMRMDSSANAQQMKRLLLKNIGRSEYKEPTSVQMQAI 286
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P L R+ A APTGSGKT AF P+L L
Sbjct: 287 PSFLLRRDVLATAPTGSGKTAAFAIPILANL 317
>gi|393911181|gb|EFO18387.2| hypothetical protein LOAG_10109 [Loa loa]
Length = 542
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 51/87 (58%), Gaps = 3/87 (3%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E+ A RK I V G N+P P+ F + G L+ NL E G EPTPIQ QAIP
Sbjct: 91 EQIAHLRKLNRIFVWGNNIPDPVIHFAGID---GLPRELISNLEEFGITEPTPIQMQAIP 147
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPML 195
V+L ++ APTGSGKTLAF P++
Sbjct: 148 VMLQKKDLLCSAPTGSGKTLAFALPII 174
>gi|224065635|ref|XP_002301895.1| predicted protein [Populus trichocarpa]
gi|222843621|gb|EEE81168.1| predicted protein [Populus trichocarpa]
Length = 1112
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 102 KELNKQIERDAVF-RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
KE+++ + V RK+ + + G +VP P++T+ + G S +L + +L Y++P
Sbjct: 441 KEISRMTPEEVVACRKELELKLHGKDVPKPIKTW----HQTGLTSKILETIKKLNYEKPM 496
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
IQ QA+P+++S R+C A TGSGKTLAF+ PML ++
Sbjct: 497 TIQAQALPIIMSGRDCIGIAKTGSGKTLAFVLPMLRHIK 535
>gi|326477553|gb|EGE01563.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
equinum CBS 127.97]
Length = 812
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R++ S G LL + +GYK+
Sbjct: 336 SEKKLEHMRERDWRIFKEDFNISTKGGSLPNPMRSW----SESGLPKRLLEIIDSVGYKD 391
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 392 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 434
>gi|240282011|gb|EER45514.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus H143]
Length = 790
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G ++P+P+R++
Sbjct: 295 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW---- 350
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 351 AESGLPKRLLSIVEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 408
>gi|396925112|gb|AFN89214.1| vasa [Solea senegalensis]
Length = 558
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 190 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 245
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 246 AQTGSGKTAAFLLPMLQRLMADGVAGSRFSEL 277
>gi|307198933|gb|EFN79685.1| Probable ATP-dependent RNA helicase DDX52 [Harpegnathos saltator]
Length = 452
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 51/86 (59%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R + I V+G VP + F +L +++ L+ N+ Y PTP+Q QA+P+LL
Sbjct: 4 LRNQNRISVTGNRVPELITDFEELKTKYQISENLMNNMKACDYICPTPVQMQAMPILLEG 63
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R ACAPTGSGKT AFL P++ L+
Sbjct: 64 RNILACAPTGSGKTAAFLLPIICSLQ 89
>gi|50557160|ref|XP_505988.1| YALI0F28391p [Yarrowia lipolytica]
gi|74659615|sp|Q6C024.1|PRP28_YARLI RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49651858|emb|CAG78800.1| YALI0F28391p [Yarrowia lipolytica CLIB122]
Length = 575
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 71/127 (55%), Gaps = 18/127 (14%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHV-SGANVPSPLRTFVKLSSRFGCES 145
++K +ED + K + RD +F++ Y+I G N+P+PLR++ + G
Sbjct: 117 RQKRDLEDA-HWSDKPVESMTSRDWRIFKEDYSIVTKGGGNIPNPLRSWNECKEIPG--- 172
Query: 146 YLLRN-LAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIP 204
++R+ ++ +GYKEPTPIQR AIP+ L R+ A TGSGKT +FL P++
Sbjct: 173 -IVRDTISRMGYKEPTPIQRAAIPIALGIRDVIGVAETGSGKTASFLIPLI--------- 222
Query: 205 FDYFCEL 211
Y CEL
Sbjct: 223 -SYICEL 228
>gi|291165179|gb|ADD81194.1| vasa [Auxis thazard]
Length = 627
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 87 DKEKEKVEDGPSKAKKELNKQI--ERDAVFRK--------KYN---IHVSGANVPSPLRT 133
DK+ EK EDG + + + D VF KY+ + VSG N P + T
Sbjct: 136 DKDGEKKEDGDRPKITYVPPTLPEDEDTVFSHYETGINFDKYDDIMVDVSGTNPPQAVMT 195
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
F + + CES L +N+++ GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P
Sbjct: 196 FDEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLP 251
Query: 194 MLMKLRVLFIPFDYFCEL 211
+L +L + F EL
Sbjct: 252 ILQQLMADGVAASRFSEL 269
>gi|326474132|gb|EGD98141.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
tonsurans CBS 112818]
Length = 809
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ S G LL + +GYK+
Sbjct: 336 SEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSW----SESGLPKRLLEIIDSVGYKD 391
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 392 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 434
>gi|294946828|ref|XP_002785180.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
gi|239898755|gb|EER16976.1| ATP-dependent RNA helicase ROK1, putative [Perkinsus marinus ATCC
50983]
Length = 515
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 3/113 (2%)
Query: 89 EKEKVEDGPSKAKKELN--KQIERDAVFRKKYNIHVSG-ANVPSPLRTFVKLSSRFGCES 145
E + V++ KK + +++E FRK+ + VSG +N P P+ TF S
Sbjct: 104 EDDAVDEAQRSRKKTVTPARRLEMANHFRKENRVGVSGTSNPPDPILTFDTDSDDDRVSK 163
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+L + + G+ +PTPIQ QAIP++L+ A APTGSGKTLAF+ P+L +L
Sbjct: 164 WLKEAMTKSGFPKPTPIQSQAIPLMLTGDHLLAQAPTGSGKTLAFIVPLLQRL 216
>gi|207367146|dbj|BAG72093.1| vasa [Trachurus japonicus]
Length = 657
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 207 VDVSGSNPPQAVMTFEEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 262
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L KL + F EL
Sbjct: 263 AQTGSGKTAAFLLPILQKLMADGVAASQFSEL 294
>gi|403415647|emb|CCM02347.1| predicted protein [Fibroporia radiculosa]
Length = 727
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 5/96 (5%)
Query: 101 KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
+K L++ ERD +FR+ ++I G +P PLR++ + +L + ++GYKEP
Sbjct: 268 EKSLDEMKERDWRIFREDFSIAARGGQIPHPLRSWTESI----IPQQILDVIDKIGYKEP 323
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 324 SPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 359
>gi|340992734|gb|EGS23289.1| hypothetical protein CTHT_0009560 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1198
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 54/81 (66%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG NVP P++ + S+ G +L + +LG+++PTPIQ QA+PV++S R+
Sbjct: 564 GIKVSGKNVPKPVQKW----SQCGLTRPILDTIEKLGFEKPTPIQMQALPVIMSGRDVIG 619
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF+ PML ++
Sbjct: 620 VAKTGSGKTMAFVLPMLRHIK 640
>gi|325088148|gb|EGC41458.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus H88]
Length = 805
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G ++P+P+R++
Sbjct: 310 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW---- 365
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 366 AESGLPKRLLSIVEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 423
>gi|295668368|ref|XP_002794733.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28
[Paracoccidioides sp. 'lutzii' Pb01]
gi|226286149|gb|EEH41715.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28
[Paracoccidioides sp. 'lutzii' Pb01]
Length = 803
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 44/118 (37%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G +VP+P+R++
Sbjct: 309 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSVPNPMRSW---- 364
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 365 AESGLPKRLLSIIDKVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 422
>gi|225559088|gb|EEH07371.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
capsulatus G186AR]
Length = 805
Score = 78.2 bits (191), Expect = 2e-12, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G ++P+P+R++
Sbjct: 310 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW---- 365
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 366 AESGLPKRLLSIVEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 423
>gi|300120302|emb|CBK19856.2| unnamed protein product [Blastocystis hominis]
Length = 563
Score = 78.2 bits (191), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 54/87 (62%), Gaps = 3/87 (3%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKL---SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVL 170
FR+ I VSG ++P+P+ TF + S + + +L+N+ YKEPTPIQ Q+IP++
Sbjct: 104 FRQSMRISVSGGDIPAPIYTFENMPFRSDQSKLKETILQNIENSEYKEPTPIQMQSIPII 163
Query: 171 LSDRECFACAPTGSGKTLAFLCPMLMK 197
+ RE PTGS KT A+L P+L +
Sbjct: 164 IQTREFLGIVPTGSVKTAAYLLPILQR 190
>gi|157108214|ref|XP_001650127.1| DEAD box ATP-dependent RNA helicase [Aedes aegypti]
gi|65306807|gb|AAY41941.1| vasa-like protein [Aedes aegypti]
gi|108879362|gb|EAT43587.1| AAEL004978-PA [Aedes aegypti]
Length = 638
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++V+G N PSP+++F G YLL+N+ + Y +PTPIQ+ AIP+++ R+ AC
Sbjct: 203 VNVTGENPPSPIKSF----GDSGLRDYLLQNIRKSHYTKPTPIQKYAIPIIMDKRDLMAC 258
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL PM+ L
Sbjct: 259 AQTGSGKTAAFLLPMINTL 277
>gi|409082396|gb|EKM82754.1| hypothetical protein AGABI1DRAFT_104628 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 747
Score = 77.8 bits (190), Expect = 2e-12, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L + ERD +FR+ ++I G N+P PLR++ + +L + +GYKEP+
Sbjct: 289 KPLVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQ----IPESILECIDRIGYKEPS 344
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 345 PIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 379
>gi|171680181|ref|XP_001905036.1| hypothetical protein [Podospora anserina S mat+]
gi|170939717|emb|CAP64943.1| unnamed protein product [Podospora anserina S mat+]
Length = 1221
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + S+ G +L + LGY++PTPIQ QA+PV++S R+
Sbjct: 567 GIKVSGKNIPRPVQKW----SQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDVIG 622
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF PML ++
Sbjct: 623 VAKTGSGKTMAFALPMLRHIK 643
>gi|158300210|ref|XP_001689233.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|158300212|ref|XP_320199.4| AGAP012358-PA [Anopheles gambiae str. PEST]
gi|157013048|gb|EDO63299.1| AGAP012358-PB [Anopheles gambiae str. PEST]
gi|157013049|gb|EAA00143.4| AGAP012358-PA [Anopheles gambiae str. PEST]
Length = 598
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 54/90 (60%), Gaps = 5/90 (5%)
Query: 114 FRKKYNIHVSGAN----VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R + IHV + VP+ + +F +LS+ +G + L+ N+ Y PTP+Q QAIP+
Sbjct: 117 LRNQLKIHVKKSRHSPEVPNIIESFDQLSTDYGVSNRLVANIQSC-YSTPTPVQMQAIPI 175
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LL ACAPTGSGKT AFL P+L L+
Sbjct: 176 LLKTHSLHACAPTGSGKTAAFLIPILHHLK 205
>gi|327296165|ref|XP_003232777.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
rubrum CBS 118892]
gi|326465088|gb|EGD90541.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Trichophyton
rubrum CBS 118892]
Length = 811
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ S G LL + +GYK+
Sbjct: 335 SEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSW----SESGLPKRLLEIIDSVGYKD 390
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 391 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 433
>gi|302503157|ref|XP_003013539.1| hypothetical protein ARB_00357 [Arthroderma benhamiae CBS 112371]
gi|291177103|gb|EFE32899.1| hypothetical protein ARB_00357 [Arthroderma benhamiae CBS 112371]
Length = 812
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ S G LL + +GYK+
Sbjct: 336 SEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSW----SESGLPKRLLEIIDSVGYKD 391
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 392 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 434
>gi|390433214|ref|ZP_10221752.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans IG1]
Length = 456
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F PML KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPMLQKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TATPI 70
>gi|372277732|ref|ZP_09513768.1| ATP-dependent RNA helicase RhlE [Pantoea sp. SL1_M5]
Length = 457
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F PML KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPMLQKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TATPI 70
>gi|315051548|ref|XP_003175148.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Arthroderma
gypseum CBS 118893]
gi|311340463|gb|EFQ99665.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Arthroderma
gypseum CBS 118893]
Length = 813
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ S G LL + +GYK+
Sbjct: 337 SEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSW----SESGLPKRLLEIIDSVGYKD 392
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 393 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 435
>gi|302660003|ref|XP_003021686.1| hypothetical protein TRV_04197 [Trichophyton verrucosum HKI 0517]
gi|291185595|gb|EFE41068.1| hypothetical protein TRV_04197 [Trichophyton verrucosum HKI 0517]
Length = 813
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 64/103 (62%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R++ S G LL + +GYK+
Sbjct: 337 SEKKLEHMRERDWRIFKEDFNISTKGGGLPNPMRSW----SESGLPKRLLEIIDSVGYKD 392
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR +IP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 393 PSPIQRVSIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 435
>gi|449547452|gb|EMD38420.1| hypothetical protein CERSUDRAFT_105018 [Ceriporiopsis subvermispora
B]
Length = 758
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L + ERD +FR+ ++I G +P PLR++ + S +L + ++GYKE
Sbjct: 298 SDKSLEEMKERDWRIFREDFSIAARGGQIPHPLRSWKESI----IPSEILEVIDKIGYKE 353
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 354 PSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 390
>gi|301101090|ref|XP_002899634.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262103942|gb|EEY61994.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 456
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 53/84 (63%), Gaps = 4/84 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A R + ++ V G +VP+P+R+F+ L G + +L+ L +LG + PT IQ QA PV L
Sbjct: 42 ANLRSELDVRVDGVDVPAPVRSFMHL----GLDRKMLQTLMKLGLEAPTAIQTQAFPVAL 97
Query: 172 SDRECFACAPTGSGKTLAFLCPML 195
S R+ A TGSGKTLAF PM+
Sbjct: 98 SGRDLIGIAKTGSGKTLAFTLPMV 121
>gi|224135589|ref|XP_002322111.1| predicted protein [Populus trichocarpa]
gi|222869107|gb|EEF06238.1| predicted protein [Populus trichocarpa]
Length = 710
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 62/99 (62%), Gaps = 9/99 (9%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV--KLSSRFGCESYLLRNLAELGY 156
++K+L + ERD +FR+ +NI G+ +P P+R++ KLSS LL+ + + Y
Sbjct: 257 SEKKLEEMTERDWRIFREDFNISYKGSKIPRPMRSWAESKLSSE------LLKAVERVVY 310
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
K+P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 311 KKPSPIQMAAIPLGLQQRDVIGIAETGSGKTCAFVLPML 349
>gi|426200230|gb|EKV50154.1| hypothetical protein AGABI2DRAFT_216556, partial [Agaricus bisporus
var. bisporus H97]
Length = 747
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/95 (44%), Positives = 59/95 (62%), Gaps = 5/95 (5%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L + ERD +FR+ ++I G N+P PLR++ + +L + +GYKEP+
Sbjct: 289 KPLVEMKERDWRIFREDFSISARGGNIPHPLRSWRESQ----IPESILECIDRIGYKEPS 344
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 345 PIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 379
>gi|324502886|gb|ADY41264.1| ATP-dependent RNA helicase DDX46 [Ascaris suum]
Length = 784
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/81 (45%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ +I V G N P P+R++ ++ G E +L L +L Y +PT IQ QAIP ++S
Sbjct: 106 YREELDIRVRGKNCPKPVRSW----AQCGVEWKILNTLKKLEYTKPTAIQAQAIPAIMSG 161
Query: 174 RECFACAPTGSGKTLAFLCPM 194
R+ A TGSGKTLAFL PM
Sbjct: 162 RDVIGIAKTGSGKTLAFLLPM 182
>gi|357620336|gb|EHJ72566.1| DEAD box polypeptide 5 [Danaus plexippus]
Length = 592
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R K+ + VSGA+VP+P++ F Y++++++ +GY EPTPIQ Q P+ +S
Sbjct: 137 YRNKHEVSVSGADVPNPIQHF----EEGNFPDYVMKSISSMGYNEPTPIQAQGWPIAMSG 192
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
+ A TGSGKTLA++ P ++ +
Sbjct: 193 KNLVGIAQTGSGKTLAYILPAIVHI 217
>gi|403335789|gb|EJY67078.1| DEAD-box ATP-dependent RNA helicase, putative [Oxytricha trifallax]
Length = 715
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 58/197 (29%), Positives = 97/197 (49%), Gaps = 24/197 (12%)
Query: 9 FAGVSFDKKKFVTDFARFKEN-----KESENLADDFSFVEGEKTDPE----KAMVSFVKK 59
+ G+ +KK+ + +FK+ SE+ + D + + ++ DP+ K + +
Sbjct: 158 YLGIIKEKKRVIKPSDKFKQVFHFAWDASEDTSKDINPLYNQRHDPKLLFGKGHLGGLDL 217
Query: 60 RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKY 118
+ G VEG KQ VDK + KK L + ERD +FR+ Y
Sbjct: 218 EAQAKQNGAKVEG-------KQ----VDKYMGQRSSLEEYLKKPLEEMTERDWKIFREDY 266
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+I G +P+P+R++ ++ + L N++E GY P PIQ Q IP+ ++ R+
Sbjct: 267 DIMRKGGRIPNPVRSWDEIEN---LHPILRDNISECGYPRPMPIQMQTIPIGMNFRDLIG 323
Query: 179 CAPTGSGKTLAFLCPML 195
APTGSGK+ AFL P++
Sbjct: 324 LAPTGSGKSAAFLIPLV 340
>gi|66522071|ref|XP_624210.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Apis mellifera]
Length = 772
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LNKQ D RK I VSG + P+P+ +F FG + L++ + + Y +PTPIQ
Sbjct: 229 LNKQQVDD--LRKTLGIKVSGPSPPNPVTSF----GHFGFDDALIKAIRKNEYTQPTPIQ 282
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
QA+P LS R+ A TGSGKT AF+ PML+ +
Sbjct: 283 AQAVPAALSGRDIIGIAKTGSGKTAAFIWPMLVHI 317
>gi|390598082|gb|EIN07481.1| P-loop containing nucleoside triphosphate hydrolase protein
[Punctularia strigosozonata HHB-11173 SS5]
Length = 752
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ ++I G +P PLR++ + +L + +GYKE
Sbjct: 288 SEKKLEEMRERDWRIFREDFSIAARGGQIPHPLRSW----EESDIPAQILEIVDSIGYKE 343
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 344 PSPIQRQAIPIGLQNRDVIGIAETGSGKTAAFVIPML 380
>gi|550331|emb|CAA57418.1| putative RNA helicase [Dictyostelium discoideum]
Length = 566
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/100 (38%), Positives = 60/100 (60%), Gaps = 5/100 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+KK L +RD +F++ +NI G P+P+RT+ +L + +LGY++
Sbjct: 112 SKKPLKSMTKRDWHIFKEDFNISTKGGIAPNPIRTW----QESNLPREILEAIRQLGYEK 167
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+PIQ Q+IP+ L+ R+ A TGSGKT AF+ PML+ +
Sbjct: 168 PSPIQMQSIPISLTGRDILGIAETGSGKTCAFVIPMLIYI 207
>gi|99032027|pdb|2DB3|A Chain A, Structural Basis For Rna Unwinding By The Dead-Box Protein
Drosophila Vasa
gi|99032028|pdb|2DB3|B Chain B, Structural Basis For Rna Unwinding By The Dead-Box Protein
Drosophila Vasa
gi|99032029|pdb|2DB3|C Chain C, Structural Basis For Rna Unwinding By The Dead-Box Protein
Drosophila Vasa
gi|99032030|pdb|2DB3|D Chain D, Structural Basis For Rna Unwinding By The Dead-Box Protein
Drosophila Vasa
Length = 434
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 60/105 (57%), Gaps = 7/105 (6%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS E+ + KYN + V+G++VP P++ F R ++ N+ +
Sbjct: 18 PSNDAIEIFSSGIASGIHFSKYNNIPVKVTGSDVPQPIQHFTSADLR----DIIIDNVNK 73
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GYK PTPIQ+ +IPV+ S R+ ACA TGSGKT AFL P+L KL
Sbjct: 74 SGYKIPTPIQKCSIPVISSGRDLMACAQTGSGKTAAFLLPILSKL 118
>gi|159469610|ref|XP_001692956.1| pre-mRNA-splicing ATP-dependent RNA helicase [Chlamydomonas
reinhardtii]
gi|158277758|gb|EDP03525.1| pre-mRNA-splicing ATP-dependent RNA helicase [Chlamydomonas
reinhardtii]
Length = 571
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/139 (37%), Positives = 74/139 (53%), Gaps = 9/139 (6%)
Query: 60 RKRKSIAG--ETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDA-VFRK 116
RK + AG +T E + K+L D +VE +K L++ ERD +FR+
Sbjct: 79 RKTRMAAGIEDTHETREHDRERKRLADQYDGFDMRVE--KHWTEKSLDEMNERDWRIFRE 136
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
+NI G N P+R + G S LL+ + ++GYK+P+PIQ AIP+ L R+
Sbjct: 137 DFNIGYRGVNTVLPIRKW----EESGLPSLLLKAIEKVGYKKPSPIQMAAIPLGLKQRDV 192
Query: 177 FACAPTGSGKTLAFLCPML 195
A TGSGKT AF+ PML
Sbjct: 193 IGIAETGSGKTAAFVLPML 211
>gi|116181632|ref|XP_001220665.1| hypothetical protein CHGG_01444 [Chaetomium globosum CBS 148.51]
gi|118597484|sp|Q2HEB0.1|PRP28_CHAGB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|88185741|gb|EAQ93209.1| hypothetical protein CHGG_01444 [Chaetomium globosum CBS 148.51]
Length = 705
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 62/111 (55%), Gaps = 13/111 (11%)
Query: 96 GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
G ++K+L ERD +F++ + I G +P+P+R++ ES L R L E+
Sbjct: 232 GKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSW--------AESNLPRRLLEI 283
Query: 155 ----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
GY EPTPIQR AIP+ R+ A TGSGKT AFL P+L+ + L
Sbjct: 284 VENVGYDEPTPIQRAAIPIAQQARDLIGVAVTGSGKTAAFLLPLLVYISEL 334
>gi|327356974|gb|EGE85831.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis ATCC 18188]
Length = 798
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R++ + G LL + ++GY +
Sbjct: 324 SEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW----AESGLPKRLLNIIEQVGYTD 379
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 380 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 417
>gi|261204203|ref|XP_002629315.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis SLH14081]
gi|239587100|gb|EEQ69743.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis SLH14081]
gi|239614347|gb|EEQ91334.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Ajellomyces
dermatitidis ER-3]
Length = 804
Score = 77.4 bits (189), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/98 (39%), Positives = 63/98 (64%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R++ + G LL + ++GY +
Sbjct: 330 SEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW----AESGLPKRLLNIIEQVGYTD 385
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 386 PSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 423
>gi|302801267|ref|XP_002982390.1| hypothetical protein SELMODRAFT_116186 [Selaginella moellendorffii]
gi|300149982|gb|EFJ16635.1| hypothetical protein SELMODRAFT_116186 [Selaginella moellendorffii]
Length = 577
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K +I V G +VP P+R+F G +LR L E G K PTPIQ Q +P +LS
Sbjct: 124 IRNKLHILVEGEDVPPPIRSF----KDMGLPKSVLRKLKEKGVKHPTPIQVQGLPAILSG 179
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTLAF+ P++M
Sbjct: 180 RDMIGVAFTGSGKTLAFVLPLIM 202
>gi|221105444|ref|XP_002161749.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Hydra
magnipapillata]
Length = 1335
Score = 77.4 bits (189), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+I V G ++P P++T+ S+ G + +L L +L Y++PTPIQ QAIP ++S R+
Sbjct: 660 DIQVRGKSIPKPIKTW----SQAGVSTKVLAVLKKLKYEKPTPIQAQAIPAIMSGRDLIG 715
Query: 179 CAPTGSGKTLAFLCPM 194
A TGSGKTLAFL P+
Sbjct: 716 IAKTGSGKTLAFLIPL 731
>gi|255561546|ref|XP_002521783.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
gi|223538996|gb|EEF40593.1| dead box ATP-dependent RNA helicase, putative [Ricinus communis]
Length = 714
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K+L++ ERD +FR+ +NI G+ +P P+R++ + S+ E LL+ + GY++
Sbjct: 261 SDKKLDEMTERDWRIFREDFNISYKGSKIPRPMRSWPE--SKLTPE--LLKAVERAGYEK 316
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 317 PSPIQMAAIPLGLQQRDVIGIAETGSGKTAAFVLPML 353
>gi|302692692|ref|XP_003036025.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
gi|300109721|gb|EFJ01123.1| hypothetical protein SCHCODRAFT_256129 [Schizophyllum commune H4-8]
Length = 760
Score = 77.4 bits (189), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +FR+ ++I G +P PLR++ S +L + +GYKE
Sbjct: 282 SEKALHEMKERDWRIFREDFSIAARGGQIPHPLRSW----QESDIPSSILDVIETIGYKE 337
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ P+L
Sbjct: 338 PSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPLL 374
>gi|302766257|ref|XP_002966549.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
gi|300165969|gb|EFJ32576.1| hypothetical protein SELMODRAFT_230807 [Selaginella moellendorffii]
Length = 581
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/83 (46%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R K +I V G +VP P+R+F G +LR L E G K PTPIQ Q +P +LS
Sbjct: 125 IRNKLHILVEGEDVPPPIRSF----KDMGLPKSVLRKLKEKGVKHPTPIQVQGLPAILSG 180
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTLAF+ P++M
Sbjct: 181 RDMIGVAFTGSGKTLAFVLPLIM 203
>gi|324106744|gb|ADX41681.2| vasa [Cynoglossus semilaevis]
Length = 722
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + C+S L +N++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 267 VNVSGTNPPQAIMTFEEAAL---CDS-LSKNVSRSGYVKPTPVQKHGIPIISAGRDLMAC 322
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + +F EL
Sbjct: 323 AQTGSGKTAAFLLPILHQLMIGGASSSFFSEL 354
>gi|440635116|gb|ELR05035.1| hypothetical protein GMDG_01606 [Geomyces destructans 20631-21]
Length = 810
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/165 (30%), Positives = 85/165 (51%), Gaps = 24/165 (14%)
Query: 48 DPEKAMVSFVKK-RKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSK------- 99
DPE ++ + K +R S AG +++L+ + E+ + ED +
Sbjct: 292 DPESGVLKYAKALEERDSEAGSA--------RARELL---EMERRRREDAGGRNSLDKHW 340
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R + G L+ +A +GY E
Sbjct: 341 SEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNW----GESGLPKRLMDVIAMVGYDE 396
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFI 203
P+ +QR AIP+ L R+ A TGSGKT AFL P+L+ + L +
Sbjct: 397 PSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISELPV 441
>gi|336272585|ref|XP_003351049.1| hypothetical protein SMAC_04353 [Sordaria macrospora k-hell]
gi|380090816|emb|CCC04986.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 1190
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + S+ G +L + LGY++PTPIQ QA+PV++S R+
Sbjct: 542 GIKVSGKNIPKPVQKW----SQCGLTRPILDTIESLGYEKPTPIQMQALPVIMSGRDVIG 597
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF P+L ++
Sbjct: 598 VAKTGSGKTMAFALPLLRHVK 618
>gi|302414960|ref|XP_003005312.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
gi|261356381|gb|EEY18809.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Verticillium
albo-atrum VaMs.102]
Length = 510
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 51/159 (32%), Positives = 76/159 (47%), Gaps = 16/159 (10%)
Query: 39 FSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
F + EGE +P M+S + G +G V ++ K E+ G
Sbjct: 134 FDWDEGE--EPRSRMISLRR--------GHHQQG-RVIVWDRRGRDLARKRAERFGFGKR 182
Query: 99 KAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
K LN+ RD +F++ + I G +P+P+R + G LL + +GY
Sbjct: 183 WTDKALNEMTARDWRIFKEDFGIATKGGAIPNPMRNW----DESGLPGRLLDIVHRVGYN 238
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+PTPIQR AIP+ L R+ A TGSGKT +FL P+L+
Sbjct: 239 DPTPIQRAAIPIALQARDLIGVAVTGSGKTASFLLPLLV 277
>gi|322802956|gb|EFZ23093.1| hypothetical protein SINV_01312 [Solenopsis invicta]
Length = 1110
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++V+G P P+++F + G + LL+N+ E GY EPTP+Q+ AIP+++S R+ AC
Sbjct: 295 VNVTGEGAPHPIKSF----DQSGLRTDLLQNIKESGYTEPTPVQKYAIPIIMSGRDLMAC 350
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AF+ P+L
Sbjct: 351 AQTGSGKTAAFVLPIL 366
>gi|320581590|gb|EFW95810.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Ogataea parapolymorpha DL-1]
Length = 1254
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 32/60 (53%), Positives = 45/60 (75%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
FG Y+L NL++ GYK+PTPIQR+ IP+++S+R+ A TGSGKT AFL P++ KL+
Sbjct: 92 FGLAKYILANLSKKGYKQPTPIQRKTIPLIMSNRDVVGMARTGSGKTAAFLLPLIEKLKT 151
>gi|154273623|ref|XP_001537663.1| hypothetical protein HCAG_07085 [Ajellomyces capsulatus NAm1]
gi|150415271|gb|EDN10624.1| hypothetical protein HCAG_07085 [Ajellomyces capsulatus NAm1]
Length = 635
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 43/118 (36%), Positives = 71/118 (60%), Gaps = 11/118 (9%)
Query: 86 VDKEKEKVEDGPSKA------KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+ + E+G A +K+L ERD +F++ +NI G ++P+P+R++
Sbjct: 337 LEMERRRKEEGGRHALDAHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRSW---- 392
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+ G LL + ++GY +P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 393 AESGLPKRLLSIVEQVGYTDPSPIQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLV 450
>gi|194857377|ref|XP_001968940.1| GG25145 [Drosophila erecta]
gi|190660807|gb|EDV57999.1| GG25145 [Drosophila erecta]
Length = 512
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG NVP +R F R + N+ + GYK PTPIQ+ +IPV+++ R+ AC
Sbjct: 81 VKVSGENVPKAIRNFEHAQLR----DIIRENVTKSGYKVPTPIQKVSIPVIVAGRDLMAC 136
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 137 AQTGSGKTAAFLVPILSKL 155
>gi|336367070|gb|EGN95415.1| hypothetical protein SERLA73DRAFT_162301 [Serpula lacrymans var.
lacrymans S7.3]
gi|336379794|gb|EGO20948.1| hypothetical protein SERLADRAFT_417400 [Serpula lacrymans var.
lacrymans S7.9]
Length = 756
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ ERD +FR+ ++I G +P PLR++ + + +L +A++GYKE
Sbjct: 296 SDKSLDEMKERDWRIFREDFSISARGGAIPHPLRSWTESA----IPEIILDVIAKIGYKE 351
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+ IQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 352 PSAIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 388
>gi|328771122|gb|EGF81162.1| hypothetical protein BATDEDRAFT_10391 [Batrachochytrium
dendrobatidis JAM81]
Length = 521
Score = 77.0 bits (188), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/85 (45%), Positives = 52/85 (61%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R++ ++ V G +VP P +F + FG + LL + + GY EPT IQRQA+PV LS
Sbjct: 49 IRQQLDMRVFGKHVPRPCISF----AHFGFDESLLNCIIKHGYTEPTGIQRQAVPVALSG 104
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
+ A TGSGKT AFL PML+ L
Sbjct: 105 HDLIGIAQTGSGKTAAFLWPMLVHL 129
>gi|147821303|emb|CAN74586.1| hypothetical protein VITISV_041989 [Vitis vinifera]
Length = 771
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 77 KSSKQLVPAVDK---EKEKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K + +PA+D E E + K ++ E+D +RK +I VSG +VP P++
Sbjct: 167 KKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIK 226
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
TF G L+ + + GY++PTPIQ QA P++LS R+ A TGSGKT AF+
Sbjct: 227 TF----EDCGFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVL 282
Query: 193 PMLMKL 198
PM++ +
Sbjct: 283 PMIVHI 288
>gi|367052807|ref|XP_003656782.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
gi|347004047|gb|AEO70446.1| hypothetical protein THITE_2121904 [Thielavia terrestris NRRL 8126]
Length = 718
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 49/133 (36%), Positives = 74/133 (55%), Gaps = 16/133 (12%)
Query: 77 KSSKQLVPAVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLR 132
+ ++QL+ ++ K+ E G ++K+L ERD +F++ + I G +P+P+R
Sbjct: 222 QRARQLLEQHERAKQAAERKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMR 281
Query: 133 TFVKLSSRFGCESYLLRNLAEL----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTL 188
++ ES L R L E+ GY EPTPIQR AIP+ L R+ A TGSGKT
Sbjct: 282 SWQ--------ESNLPRRLLEIVHSVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTA 333
Query: 189 AFLCPMLMKLRVL 201
AFL P+L+ + L
Sbjct: 334 AFLLPLLVYISEL 346
>gi|225437591|ref|XP_002277419.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24 [Vitis vinifera]
gi|297743992|emb|CBI36962.3| unnamed protein product [Vitis vinifera]
Length = 771
Score = 77.0 bits (188), Expect = 4e-12, Method: Composition-based stats.
Identities = 46/126 (36%), Positives = 70/126 (55%), Gaps = 8/126 (6%)
Query: 77 KSSKQLVPAVDK---EKEKVEDGPSKAKKELNKQIERDAV-FRKKYNIHVSGANVPSPLR 132
K + +PA+D E E + K ++ E+D +RK +I VSG +VP P++
Sbjct: 167 KKKIEPIPALDHSSIEYEPFNKDFYEEKDSISGMTEQDVTEYRKSLSIRVSGFDVPRPIK 226
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
TF G L+ + + GY++PTPIQ QA P++LS R+ A TGSGKT AF+
Sbjct: 227 TF----EDCGFSPQLMNAITKQGYEKPTPIQCQAFPIVLSGRDIIGIAKTGSGKTAAFVL 282
Query: 193 PMLMKL 198
PM++ +
Sbjct: 283 PMIVHI 288
>gi|342320678|gb|EGU12617.1| Pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Rhodotorula
glutinis ATCC 204091]
Length = 903
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 41/97 (42%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + +RD +FR+ ++I G ++P PLR++ + +L + E+GYKE
Sbjct: 432 SEKSLEEMRDRDWRIFREDFSIGARGGHIPLPLRSWKESK----IPQPILEAIEEIGYKE 487
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF PML
Sbjct: 488 PSPIQRQAIPIGLQNRDMIGIAETGSGKTAAFTIPML 524
>gi|242069203|ref|XP_002449878.1| hypothetical protein SORBIDRAFT_05g024780 [Sorghum bicolor]
gi|241935721|gb|EES08866.1| hypothetical protein SORBIDRAFT_05g024780 [Sorghum bicolor]
Length = 688
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 43/97 (44%), Positives = 61/97 (62%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L + ERD +FR+ ++I G+ VP P+R + K S+ G + LLR + E GY++
Sbjct: 240 SDKALEEMTERDWRIFREDFSISYQGSGVPKPMRHWSK--SKLGAK--LLRAVDEAGYRK 295
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A A TGSGKT AF P+L
Sbjct: 296 PSPIQMAAIPLGLQQRDAIAVAETGSGKTAAFALPLL 332
>gi|296810762|ref|XP_002845719.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Arthroderma
otae CBS 113480]
gi|238843107|gb|EEQ32769.1| pre-mRNA-splicing ATP-dependent RNA helicase prp28 [Arthroderma
otae CBS 113480]
Length = 801
Score = 77.0 bits (188), Expect = 5e-12, Method: Composition-based stats.
Identities = 42/103 (40%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R + S LL + +GYKE
Sbjct: 339 SEKKLEHMRERDWRIFKEDFNISTKGGSLPNPMRAW----SESNLPKRLLDIIDSVGYKE 394
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQR AIP+ L +R+ A TGSGKT AFL P+L+ + L
Sbjct: 395 PSPIQRVAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVYISSL 437
>gi|242012580|ref|XP_002427009.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
gi|212511247|gb|EEB14271.1| DEAD box ATP-dependent RNA helicase, putative [Pediculus humanus
corporis]
Length = 538
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 49/139 (35%), Positives = 72/139 (51%), Gaps = 15/139 (10%)
Query: 71 EGFNVFKSSKQLVPAVDKEKEK--------VEDGPSKAKKELNKQIERDAVFRKKYN--- 119
E F FK+S Q DKEK K + D P++ E+ + +KY+
Sbjct: 59 ENFYNFKTSNQDSFKPDKEKNKLIKPKSTYIPDDPTEDDNEIFGNHISSGINFEKYDDIE 118
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + +F + G S L+ + + Y +PTPIQ+ IP+++S R+ C
Sbjct: 119 VKVSGKNPPKSINSF----NEAGLCSTLINLINKCQYHKPTPIQKHCIPIIMSGRDLMGC 174
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ KL
Sbjct: 175 AQTGSGKTAAFLIPIINKL 193
>gi|168025828|ref|XP_001765435.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162683285|gb|EDQ69696.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 535
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L + ERD +FR+ +NI G+ +P P+R + + LL+ + ++GY +
Sbjct: 81 SEKKLEEMTERDWRIFREDFNISYKGSRIPRPMRNW----AEGALSPELLKAVQKVGYTK 136
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 137 PSPIQMAAIPIGLQQRDVIGIAETGSGKTAAFVLPML 173
>gi|358377711|gb|EHK15394.1| hypothetical protein TRIVIDRAFT_38043 [Trichoderma virens Gv29-8]
Length = 727
Score = 76.6 bits (187), Expect = 5e-12, Method: Composition-based stats.
Identities = 46/116 (39%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A D+ KE+ E G + K+LN+ ERD +F++ + I G +P+P+R +
Sbjct: 236 ARDRAKERAERTGLGRHWSDKDLNEMRERDWRIFKEDFGISTKGGAIPNPMRNW----QE 291
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G LL + +GYKEP+ IQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 292 SGLPRRLLDIVDNVGYKEPSAIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 347
>gi|67582494|ref|XP_664922.1| U5 snRNP 100 kD protein [Cryptosporidium hominis TU502]
gi|54655086|gb|EAL34692.1| U5 snRNP 100 kD protein [Cryptosporidium hominis]
Length = 288
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 59/88 (67%), Gaps = 5/88 (5%)
Query: 109 ERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
ERD +FR+ Y+I+V G +VP+P+R + K ++ L++N+ GY++PTPIQ Q I
Sbjct: 3 ERDWKIFREDYSINVRGKDVPNPIRNW-KDCHVLEIQTELIKNI---GYEKPTPIQMQCI 58
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPML 195
P+ L R+ A TGSGKT+AFL P++
Sbjct: 59 PIGLKLRDMIGIAETGSGKTIAFLIPLI 86
>gi|154342955|ref|XP_001567423.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
gi|134064755|emb|CAM42860.1| putative RNA helicase [Leishmania braziliensis MHOM/BR/75/M2904]
Length = 584
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 114 FRKKYNI------HVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQA 166
F+KK NI V+G ++P+P+ F L ++ NL +K PTPIQ QA
Sbjct: 112 FKKKRNIWHRNELQVTGMDLPAPIEHFSDLVRPPLSVPRNIVNNLFARQHKVPTPIQMQA 171
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
IP L+ R+ ACAPTGSGKT+AFL P+ LR
Sbjct: 172 IPSLIHHRDVLACAPTGSGKTIAFLTPLFALLR 204
>gi|357607424|gb|EHJ65488.1| vasa-like protein [Danaus plexippus]
Length = 606
Score = 76.6 bits (187), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G N P + +F + R +Y+L N+ + GYK+PTPIQ+ AIP++++ R+ C
Sbjct: 178 VKVTGENPPRAIESFETANLR----NYVLNNILKSGYKKPTPIQKHAIPIIMNGRDLMGC 233
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ L
Sbjct: 234 AQTGSGKTAAFLLPIINTL 252
>gi|85118552|ref|XP_965469.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|74662807|sp|Q7SH33.1|PRP5_NEUCR RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp-5
gi|28927278|gb|EAA36233.1| hypothetical protein NCU02696 [Neurospora crassa OR74A]
gi|38567223|emb|CAE76515.1| related to RNA helicase [Neurospora crassa]
Length = 1194
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + S+ G +L + LG+++PTPIQ QA+PV++S R+
Sbjct: 548 GIKVSGKNIPKPVQKW----SQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIG 603
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF PML ++
Sbjct: 604 VAKTGSGKTMAFALPMLRHVK 624
>gi|188529677|gb|ACD62525.1| Vasa [Silurus meridionalis]
Length = 662
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CE+ L RN+A+ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 212 VDVSGSNPPKAIMTFEEAQL---CET-LNRNVAKSGYVKPTPVQKHGIPIIFAGRDLMAC 267
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +L
Sbjct: 268 AQTGSGKTAAFLLPILQQL 286
>gi|350296822|gb|EGZ77799.1| Pre-mRNA-processing ATP-dependent RNA helicase prp-5 [Neurospora
tetrasperma FGSC 2509]
Length = 1195
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + S+ G +L + LG+++PTPIQ QA+PV++S R+
Sbjct: 549 GIKVSGKNIPKPVQKW----SQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIG 604
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF PML ++
Sbjct: 605 VAKTGSGKTMAFALPMLRHVK 625
>gi|336464722|gb|EGO52962.1| hypothetical protein NEUTE1DRAFT_150386 [Neurospora tetrasperma
FGSC 2508]
Length = 1193
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 52/81 (64%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + S+ G +L + LG+++PTPIQ QA+PV++S R+
Sbjct: 547 GIKVSGKNIPKPVQKW----SQCGLTRPILDTIESLGFEKPTPIQMQALPVIMSGRDVIG 602
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AF PML ++
Sbjct: 603 VAKTGSGKTMAFALPMLRHVK 623
>gi|116207046|ref|XP_001229332.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
gi|118597490|sp|Q2HAD8.1|PRP5_CHAGB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase PRP5
gi|88183413|gb|EAQ90881.1| hypothetical protein CHGG_02816 [Chaetomium globosum CBS 148.51]
Length = 1064
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/167 (34%), Positives = 87/167 (52%), Gaps = 27/167 (16%)
Query: 37 DDFSFVEGEKTDPEK--AMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVE 94
DD+ + E +K DP AM S KK+ +I +E N + + + P
Sbjct: 349 DDYGYEE-DKADPSSILAMASKKKKKDIPTIDYSKIE-LNQIRKNFWVEP---------- 396
Query: 95 DGPSKAKKELNKQIERD-AVFRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+EL++ E D A R + + I VSG NVP P++ + S+ G +L +
Sbjct: 397 -------QELSQMTEDDIADLRLELDGIKVSGKNVPKPVQKW----SQCGLTRPILDVVE 445
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
LGY++PT IQ QA+PV++S R+ A TGSGKT+AF+ PML ++
Sbjct: 446 GLGYEKPTSIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPMLRHIK 492
>gi|391340780|ref|XP_003744714.1| PREDICTED: probable ATP-dependent RNA helicase DDX52-like
[Metaseiulus occidentalis]
Length = 520
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R + I V ++P+ + F +L +R+ C L+ N+ GY+ PTP+Q IP +L
Sbjct: 52 IRTHHGIGVWADDIPAVVTDFEQLETRYQCSKQLVSNIVACGYETPTPVQMITIPAMLER 111
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
RE APTGSGKT AF+ P++ L
Sbjct: 112 REVLVSAPTGSGKTAAFVIPLVHLL 136
>gi|27463689|gb|AAO15914.1|AF510054_1 vasa-like [Schistocerca gregaria]
Length = 588
Score = 76.6 bits (187), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/105 (36%), Positives = 62/105 (59%), Gaps = 7/105 (6%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
P++ + E+ Q + KY+ + V+G N P P+ F +R G ++L+N+ +
Sbjct: 129 PTEDEDEIFGQGISSGINFDKYDNIKVEVTGENKPGPIVDF----ARSGLREFVLQNVKK 184
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ AIP++ R+ ACA TGSGKT AFL P++ +
Sbjct: 185 CGYTKPTPVQKYAIPIIAGGRDLMACAQTGSGKTAAFLLPIINTI 229
>gi|330796382|ref|XP_003286246.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
gi|325083751|gb|EGC37195.1| hypothetical protein DICPUDRAFT_54136 [Dictyostelium purpureum]
Length = 630
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+KK+L +RD +F++ +NI G VP+P+R++ + S +L + LGY++
Sbjct: 177 SKKQLRDMTKRDWHIFKEDFNISTKGGVVPNPIRSWQESS----LPRQVLDAVRHLGYEK 232
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
P+PIQ Q+IPV +S R+ A TGSGKT AF+ PM + +
Sbjct: 233 PSPIQMQSIPVSVSGRDILGIAETGSGKTCAFVIPMCIYI 272
>gi|188529679|gb|ACD62526.1| Vasa short form [Silurus meridionalis]
Length = 641
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CE+ L RN+A+ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 191 VDVSGSNPPKAIMTFEEAQL---CET-LNRNVAKSGYVKPTPVQKHGIPIIFAGRDLMAC 246
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +L
Sbjct: 247 AQTGSGKTAAFLLPILQQL 265
>gi|291165173|gb|ADD81191.1| vasa [Euthynnus affinis]
Length = 640
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 192 VDVSGTNPPQAVMTFDEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 247
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 248 AQTGSGKTAAFLLPILQQLMADGVAASRFSEL 279
>gi|385653785|gb|AFI61840.1| vasa [Lateolabrax japonicus]
Length = 632
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/138 (35%), Positives = 74/138 (53%), Gaps = 17/138 (12%)
Query: 87 DKEKEKVEDGPSKAKKELNKQI--ERDAVFRK--------KYN---IHVSGANVPSPLRT 133
DKEK+ DG + + + D++F KY+ + VSG N P + T
Sbjct: 139 DKEKKDASDGDRPKVTYVPPTLPEDEDSIFSHYETGINFDKYDDIMVDVSGTNPPQAIMT 198
Query: 134 FVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCP 193
F + + CES L +N+++ GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P
Sbjct: 199 FDEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLP 254
Query: 194 MLMKLRVLFIPFDYFCEL 211
+L +L + F EL
Sbjct: 255 ILQQLMADGVAASRFSEL 272
>gi|395837035|ref|XP_003791451.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Otolemur
garnettii]
Length = 621
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 152 LNMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQ 207
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 208 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 240
>gi|440759128|ref|ZP_20938281.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
gi|436427144|gb|ELP24828.1| ATP-dependent RNA helicase RhlE [Pantoea agglomerans 299R]
Length = 457
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TATPI 70
>gi|308186129|ref|YP_003930260.1| ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
gi|308056639|gb|ADO08811.1| Putative ATP-dependent RNA helicase rhlE [Pantoea vagans C9-1]
Length = 456
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TATPI 70
>gi|399219035|emb|CCF75922.1| unnamed protein product [Babesia microti strain RI]
Length = 635
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 44/104 (42%), Positives = 63/104 (60%), Gaps = 8/104 (7%)
Query: 99 KAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
K + E+N +RD +FR+ Y+I V G +P P+R++ + S+ E LL + GY
Sbjct: 193 KCRDEMN---DRDWMIFREDYSICVKGGRIPPPMRSWDE--SKLPKE--LLEAVKVAGYN 245
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 246 KPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKSL 289
>gi|392571875|gb|EIW65047.1| P-loop containing nucleoside triphosphate hydrolase protein
[Trametes versicolor FP-101664 SS1]
Length = 576
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 48/79 (60%)
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
++ + G NVP TF L R+ +L NLAE GYK PT IQ +P+L+ R+
Sbjct: 103 RHRVTTKGNNVPEHADTFEVLRDRYNIPPHLFANLAESGYKRPTGIQSYGVPILMEHRDL 162
Query: 177 FACAPTGSGKTLAFLCPML 195
A +PTG+GKTL++L P++
Sbjct: 163 AAISPTGTGKTLSYLLPVM 181
>gi|304395765|ref|ZP_07377648.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
gi|304357059|gb|EFM21423.1| DEAD/DEAH box helicase domain protein [Pantoea sp. aB]
Length = 457
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TATPI 70
>gi|395333596|gb|EJF65973.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Dichomitus
squalens LYAD-421 SS1]
Length = 759
Score = 76.3 bits (186), Expect = 7e-12, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 64/97 (65%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +FR+ ++I G +P P+R++ + S E +L + ++GYKE
Sbjct: 299 SEKSLDEMKERDWRIFREDFSIAARGGQIPYPIRSWRE--SAIPVE--ILDIVDQIGYKE 354
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 355 PSPIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 391
>gi|166014135|gb|ABY77970.1| vasa [Thunnus orientalis]
Length = 644
Score = 76.3 bits (186), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 196 VDVSGTNPPQAVMTFDEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 251
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 252 AQTGSGKTAAFLLPILQQLMADGVAASRFSEL 283
>gi|10039331|dbj|BAB13308.1| vasa-related protein CnVAS2 [Hydra vulgaris]
Length = 890
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 52/83 (62%), Gaps = 4/83 (4%)
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
K I +SG N P P+++F + + C L+NL YKEPTPIQ+ AIP +L+ R+
Sbjct: 434 KHIPIELSGTNRPKPIQSFSEANLHPVC----LKNLDLAKYKEPTPIQKYAIPAILAKRD 489
Query: 176 CFACAPTGSGKTLAFLCPMLMKL 198
ACA TGSGKT +FL P++ L
Sbjct: 490 VMACAQTGSGKTASFLLPIITNL 512
>gi|291165177|gb|ADD81193.1| vasa [Auxis rochei]
Length = 627
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 181 VDVSGTNPPQAVMTFDEAAL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 236
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 237 AQTGSGKTAAFLLPILQQLMADGVAASRFSEL 268
>gi|164655062|ref|XP_001728662.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
gi|159102545|gb|EDP41448.1| hypothetical protein MGL_4141 [Malassezia globosa CBS 7966]
Length = 623
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 60/97 (61%), Gaps = 6/97 (6%)
Query: 101 KKELNKQIERDA-VFRKKYNIHVSGA-NVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+K L++ RD +FR+ Y I V G +VP PLRT+ + SR +L + +GY+E
Sbjct: 194 EKSLSEMRPRDWRIFREDYQIQVRGGEDVPPPLRTWRE--SRI--PGAILDAIEAMGYRE 249
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PT IQRQAIP+ L R+ A TGSGKT +F+ PML
Sbjct: 250 PTSIQRQAIPIGLIPRDLIGLAETGSGKTASFVVPML 286
>gi|291616785|ref|YP_003519527.1| RhlE [Pantoea ananatis LMG 20103]
gi|291151815|gb|ADD76399.1| RhlE [Pantoea ananatis LMG 20103]
Length = 449
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+LS R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLSGRDLLASAQTGTGKTAGFTLPLLQKL 63
>gi|170088270|ref|XP_001875358.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650558|gb|EDR14799.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 691
Score = 76.3 bits (186), Expect = 8e-12, Method: Composition-based stats.
Identities = 40/95 (42%), Positives = 62/95 (65%), Gaps = 5/95 (5%)
Query: 102 KELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L++ ERD +FR+ ++I G ++P PLR++ + + +L + ++GYK+P+
Sbjct: 233 KPLDEMKERDWRIFREDFSISARGGSIPHPLRSWTESA----IPQPILDCIEQIGYKDPS 288
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 289 PIQRQAIPIGLLNRDIIGIAETGSGKTAAFVIPML 323
>gi|386015150|ref|YP_005933429.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|386080118|ref|YP_005993643.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
gi|327393211|dbj|BAK10633.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis AJ13355]
gi|354989299|gb|AER33423.1| putative ATP-dependent RNA helicase RhlE [Pantoea ananatis PA13]
Length = 449
Score = 76.3 bits (186), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+LS R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLSGRDLLASAQTGTGKTAGFTLPLLQKL 63
>gi|378768016|ref|YP_005196486.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
gi|365187499|emb|CCF10449.1| ATP-dependent RNA helicase RhlE [Pantoea ananatis LMG 5342]
Length = 449
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 41/58 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+LS R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLSGRDLLASAQTGTGKTAGFTLPLLQKL 63
>gi|56090019|gb|AAV70960.1| Vasa [Carassius gibelio]
Length = 701
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 252 VDVSGSNPPKAIMTFDEAGP---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 307
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 308 AQTGSGKTAAFLLPILQRLMADGVAASKFSEV 339
>gi|395744332|ref|XP_003778088.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX23-like [Pongo abelii]
Length = 799
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 68/115 (59%), Gaps = 5/115 (4%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESY 146
KE ++ D P ++K+L++ +RD +F + Y+I +P+P+R++ S +
Sbjct: 322 KEAKRXWDDPHWSQKKLDEMRDRDWWLFCEGYSITTKDGKIPNPIRSWKDSS----LPPH 377
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
+L + + GYKE TPIQ QAIP+ L +R+ A TGS KT AFL P+L+ + L
Sbjct: 378 ILEVIDKCGYKESTPIQCQAIPIGLQNRDIIDVAETGSSKTAAFLIPLLVXITTL 432
>gi|294658482|ref|XP_460822.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
gi|218511820|sp|Q6BLU9.2|PRP28_DEBHA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|202953164|emb|CAG89165.2| DEHA2F10538p [Debaryomyces hansenii CBS767]
Length = 580
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 59/96 (61%), Gaps = 4/96 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+++ RD +F++ YNI G ++ +PLR + + + L++NL GY
Sbjct: 121 SEKQIDDMTTRDWRIFKEDYNITSKGGDIENPLRCWAESKLPAKLLNILIKNL---GYDS 177
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
PTPIQR +IP+ L+ R+ A TGSGKTLAFL P+
Sbjct: 178 PTPIQRASIPLALNGRDIVGIAETGSGKTLAFLLPL 213
>gi|254566739|ref|XP_002490480.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|238030276|emb|CAY68199.1| Putative ATP-dependent RNA helicase of the DEAD-box protein family
[Komagataella pastoris GS115]
gi|328350871|emb|CCA37271.1| ATP-dependent RNA helicase [Komagataella pastoris CBS 7435]
Length = 1003
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 45/60 (75%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
FG +LL N+A GY++PTPIQR+ +P+++S+R+ A TGSGKT AFL P++ KL+V
Sbjct: 120 FGLSKFLLGNIARKGYRQPTPIQRKTMPLIMSNRDVVGMARTGSGKTAAFLLPLVEKLKV 179
>gi|145506703|ref|XP_001439312.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124406496|emb|CAK71915.1| unnamed protein product [Paramecium tetraurelia]
Length = 493
Score = 75.9 bits (185), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/112 (36%), Positives = 62/112 (55%), Gaps = 3/112 (2%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRT-FVKLSSRFGCESY 146
+ KE ++ + K ++I+ KK I +SG N+ +P+ T F K+ + +
Sbjct: 50 RRKESLDQIEQEMTKRRTQEIQHRNTLLKKLKIKISGDNINAPILTNFAKMKNYLNQD-- 107
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
L+ L + GY++PTPIQ AIP++L + A APTGSGKT AF P L L
Sbjct: 108 LMNQLTKSGYQKPTPIQMVAIPIILQKKNLIAIAPTGSGKTCAFALPTLHNL 159
>gi|380491163|emb|CCF35514.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Colletotrichum
higginsianum]
Length = 736
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 60/208 (28%), Positives = 98/208 (47%), Gaps = 32/208 (15%)
Query: 16 KKKFVTDFARFKENKESENLADD--------------FSFVEGEKTDPEKAMVSFVKKRK 61
K+K T+F + +E L DD F + GE + + + R+
Sbjct: 161 KRKRATEFKFEWDAEEDTTLVDDPIYESNSTTLKSYTFGSLSGEYNEEAEEIA-----RR 215
Query: 62 RKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVED-------GPSKAKKELNKQIERD-AV 113
R + E F K +K+ + + +EK ++ G KK L++ ERD +
Sbjct: 216 RARMIEERDREFGK-KRAKEFMEDFYRAREKAKERADRSGLGKHWTKKALSEMRERDWRI 274
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F++ + I G +P+P+R++ G LL + +GYK+P+PIQR AIP+ +
Sbjct: 275 FKEDFGIATKGGQIPNPMRSW----EESGLPRQLLNIVDRVGYKDPSPIQRAAIPIAMQA 330
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRVL 201
R+ A TGSGKT AFL P+L ++ L
Sbjct: 331 RDLIGVAVTGSGKTAAFLLPLLTYIQDL 358
>gi|363748448|ref|XP_003644442.1| hypothetical protein Ecym_1395 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888074|gb|AET37625.1| hypothetical protein Ecym_1395 [Eremothecium cymbalariae
DBVPG#7215]
Length = 565
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/100 (40%), Positives = 62/100 (62%), Gaps = 5/100 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE-LGYK 157
+K+L++ ERD + R+ +NI G + PLR + +L + +++ + + LGY+
Sbjct: 128 TEKKLSEMTERDWRILREDFNITAKGGGMKHPLRNWSELKL---IPTDIVKVITDDLGYE 184
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
EPTPIQR IP + ++R+ A TGSGKTLAFL P+ MK
Sbjct: 185 EPTPIQRATIPNVQNNRDFMGVASTGSGKTLAFLIPIFMK 224
>gi|347829757|emb|CCD45454.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Botryotinia fuckeliana]
Length = 817
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV--KLSSRFGCESYLLRNLAELGY 156
++K+L ERD +F++ +NI G +P+P+R + KL R LL + ++GY
Sbjct: 347 SEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWSESKLPKR------LLDVIHQVGY 400
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFC 209
EP+ +QR AIP+ L R+ A TGSGKT AFL P+L+ + L P + F
Sbjct: 401 DEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL-PPLNEFT 452
>gi|302138848|gb|ADK94762.1| vasa [Clarias gariepinus]
Length = 681
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N PS + TF + CE+ L RN++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 234 VDVSGSNPPSAIMTFEEAHL---CET-LNRNVSRAGYVKPTPVQKYGIPIISAGRDLMAC 289
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +L
Sbjct: 290 AQTGSGKTAAFLLPILQRL 308
>gi|156057349|ref|XP_001594598.1| hypothetical protein SS1G_04405 [Sclerotinia sclerotiorum 1980]
gi|160419160|sp|A7EGG4.1|PRP28_SCLS1 RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|154702191|gb|EDO01930.1| hypothetical protein SS1G_04405 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 816
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV--KLSSRFGCESYLLRNLAELGY 156
++K+L ERD +F++ +NI G +P+P+R++ KL R LL + ++GY
Sbjct: 346 SEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRSWSESKLPKR------LLDVINQVGY 399
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFC 209
EP+ +QR AIP+ L R+ A TGSGKT AFL P+L+ + L P + F
Sbjct: 400 DEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL-PPLNEFT 451
>gi|71030420|ref|XP_764852.1| ATP-dependent RNA Helicase [Theileria parva strain Muguga]
gi|68351808|gb|EAN32569.1| ATP-dependent RNA Helicase, putative [Theileria parva]
Length = 623
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 54/85 (63%), Gaps = 2/85 (2%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F+K++NI G VP P+ +F+ LS + +L + ++G+ EPTP+Q Q IP +L
Sbjct: 113 FKKRFNIETFGTRVPKPISSFIHLSKSI--PTTILNRIEKMGFYEPTPVQSQVIPCILQG 170
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R + TGSGKT+++L P+++K+
Sbjct: 171 RNTIILSETGSGKTISYLIPIVVKV 195
>gi|453082146|gb|EMF10194.1| DEAD-domain-containing protein [Mycosphaerella populorum SO2202]
Length = 807
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 38/97 (39%), Positives = 59/97 (60%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G ++P+P+R + G LL + ++GY +
Sbjct: 351 SEKKLENMRERDWRIFKEDFNIATKGGSIPNPMRNW----QESGLPKRLLDIVEQVGYTD 406
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQR AIP+ + R+ A TGSGKT AFL P+L
Sbjct: 407 PSPIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLL 443
>gi|451992643|gb|EMD85123.1| hypothetical protein COCHEDRAFT_1188822 [Cochliobolus
heterostrophus C5]
Length = 704
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 86 VDKEKEKVEDGPSK------AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
+D E+ + E G ++K L ERD +F++ +NI G ++P+P+R +
Sbjct: 228 IDMERRRKEKGGRAQLDKHWSEKRLENMRERDWRIFKEDFNIATKGGSIPNPMRNW---- 283
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
G L+R + +GY EP+PIQR AIP+ L R+ A TGSGKT AF+ P+L
Sbjct: 284 DEAGLPDKLMRIVDRVGYTEPSPIQRAAIPIALQCRDLIGVARTGSGKTAAFVLPLL 340
>gi|392566831|gb|EIW60006.1| DEAD-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 779
Score = 75.9 bits (185), Expect = 1e-11, Method: Composition-based stats.
Identities = 42/97 (43%), Positives = 63/97 (64%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +FR+ ++I G +P PLR++ + S E +L + ++GYKE
Sbjct: 319 SEKSLDEMKERDWRIFREDFSIAARGGQIPHPLRSWRE--SAIPVE--ILDIVDQIGYKE 374
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+ IQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 375 PSAIQRQAIPIGLQNRDIIGIAETGSGKTAAFVIPML 411
>gi|168002555|ref|XP_001753979.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162694955|gb|EDQ81301.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 454
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 54/97 (55%), Gaps = 18/97 (18%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K++ ERD +FR+ YNI G+ +P P+R N AE+GY +
Sbjct: 179 SEKKVEDMTERDWRIFREDYNISNKGSRIPRPMR-----------------NWAEVGYTK 221
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
P+PIQ AIP+ L R+ A TGSGKT AF+ PML
Sbjct: 222 PSPIQMAAIPIGLQQRDVIGIAETGSGKTAAFVLPML 258
>gi|345487283|ref|XP_001603249.2| PREDICTED: ATP-dependent RNA helicase DDX42-like [Nasonia
vitripennis]
Length = 793
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LNKQ + RK I V+G P+P+ +F FG + L++++ + Y +PTPIQ
Sbjct: 229 LNKQ--QIDELRKTLGIKVTGPAPPNPVTSF----GHFGFDDSLIKSIRKHEYTQPTPIQ 282
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
Q+IPV LS R+ A TGSGKT AF+ PML+ +
Sbjct: 283 AQSIPVALSGRDLIGIAKTGSGKTAAFVWPMLVHI 317
>gi|425769163|gb|EKV07664.1| DEAD/DEAH box helicase, putative [Penicillium digitatum Pd1]
gi|425770721|gb|EKV09185.1| DEAD/DEAH box helicase, putative [Penicillium digitatum PHI26]
Length = 772
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 44/107 (41%), Positives = 65/107 (60%), Gaps = 13/107 (12%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL---- 154
++K L+ ERD +F++ +NI G +VP+P+R++ ES+L + L EL
Sbjct: 306 SEKRLDLMRERDWRIFKEDFNIATKGGSVPNPMRSWE--------ESHLPKRLLELVDRV 357
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
GYK+PT IQR AIP+ + R+ A TGSGKT AFL P+L+ + L
Sbjct: 358 GYKDPTAIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISAL 404
>gi|345567391|gb|EGX50323.1| hypothetical protein AOL_s00076g87 [Arthrobotrys oligospora ATCC
24927]
Length = 791
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 43/127 (33%), Positives = 75/127 (59%), Gaps = 6/127 (4%)
Query: 77 KSSKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTF 134
+ +++LV K++E + ++K L+ ERD +F++ +NI G +P+P+R++
Sbjct: 286 RRARELVEMDRKKRENLSWSDKHWSEKPLDMMKERDWRIFKEDFNISTKGGGIPNPMRSW 345
Query: 135 VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPM 194
+ S LL + +GYK+P+PIQR AIP+ L R+ A TGSGKT +F+ P+
Sbjct: 346 KESS----LPQVLLDVIHSVGYKDPSPIQRAAIPIALRSRDVIGVAVTGSGKTASFILPL 401
Query: 195 LMKLRVL 201
L+ ++ L
Sbjct: 402 LVYIKDL 408
>gi|170046392|ref|XP_001850751.1| ATP-dependent RNA helicase vasa [Culex quinquefasciatus]
gi|167869172|gb|EDS32555.1| ATP-dependent RNA helicase vasa [Culex quinquefasciatus]
Length = 641
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 36/79 (45%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++V+G N P P+ +F + G YLL N+ + GY +PTPIQ+ AIP+++ R+ AC
Sbjct: 205 VNVTGENPPGPITSF----NESGLRDYLLTNVRKSGYLKPTPIQKYAIPIIMDKRDLMAC 260
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ L
Sbjct: 261 AQTGSGKTAAFLLPIINTL 279
>gi|385301886|gb|EIF46046.1| pre-mrna-splicing atp-dependent rna helicase prp28 [Dekkera
bruxellensis AWRI1499]
Length = 323
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 102 KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
K L K RD + R+ ++I + G N+P+PLRT+ + + +J + L YKEPT
Sbjct: 168 KPLEKMTNRDWRIMREDFDIKLKGPNIPNPLRTWKESX----LSNTIJSRINALRYKEPT 223
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PIQR IP + R A TGSGKTLA+J P+L L
Sbjct: 224 PIQRATIPAGVKFRNAIGIAETGSGKTLAYJLPILNYL 261
>gi|156406516|ref|XP_001641091.1| predicted protein [Nematostella vectensis]
gi|156228228|gb|EDO49028.1| predicted protein [Nematostella vectensis]
Length = 620
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 50/88 (56%), Gaps = 8/88 (9%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGC--ESYLLRNLAELGYKEPTPIQRQAIPVLL 171
R K I V G +V SP+ F F C L +NL+ GY PTPIQ Q +PVLL
Sbjct: 178 LRDKMEIKVKGEHVVSPVLEF------FHCSFNESLSKNLSNHGYHSPTPIQMQVLPVLL 231
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+ CA TGSGKT +FL PM+ ++
Sbjct: 232 SGRDVMVCASTGSGKTASFLLPMISRIH 259
>gi|60501853|gb|AAX22126.1| vasa [Carassius auratus]
Length = 688
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 239 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 294
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 295 AQTGSGKTAAFLLPILQRLMADGVAASKFSEV 326
>gi|380468169|gb|AFD61612.1| vasa [tetraploid red crucian carp x Cyprinus carpio]
Length = 690
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 241 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 296
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 297 AQTGSGKTAAFLLPILQRLMADGVAASKFSEV 328
>gi|60501851|gb|AAX22125.1| vasa-2 [Carassius auratus]
Length = 677
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 228 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 283
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 284 AQTGSGKTAAFLLPILQRLMADGVAASKFSEV 315
>gi|322802957|gb|EFZ23094.1| hypothetical protein SINV_02194 [Solenopsis invicta]
Length = 686
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/79 (41%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G P P+++F + G + LL N+ GY +PTP+Q+ AIP+++S R+ C
Sbjct: 75 VKVTGEGAPHPIQSF----DQSGLRTILLENIKMSGYTKPTPVQKYAIPIIMSGRDVMVC 130
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ P+L L
Sbjct: 131 AQTGSGKTAAFVLPILHSL 149
>gi|348534589|ref|XP_003454784.1| PREDICTED: probable ATP-dependent RNA helicase DDX4-like
[Oreochromis niloticus]
Length = 370
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L RN+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 119 VDVSGTNPPPAIMTFDEAAL---CES-LKRNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 174
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +L
Sbjct: 175 AQTGSGKTAAFLLPILQQL 193
>gi|310790707|gb|EFQ26240.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 733
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 45/121 (37%), Positives = 69/121 (57%), Gaps = 8/121 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A ++ KE+ + G KK L++ ERD +F++ + I G +P+P+R++
Sbjct: 239 ARERAKERADRSGLGKHWTKKALSEMRERDWRIFKEDFGIATKGGQIPNPMRSW----EE 294
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G LL + +GYK+P+PIQR AIP+ L R+ A TGSGKT AFL P+L ++
Sbjct: 295 SGLPRQLLNIVDRVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLTYIQD 354
Query: 201 L 201
L
Sbjct: 355 L 355
>gi|238008396|gb|ACR35233.1| unknown [Zea mays]
gi|413955780|gb|AFW88429.1| putative DEAD-box ATP-dependent RNA helicase family protein [Zea
mays]
Length = 618
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR+K++I V G ++P P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 155 FRRKWHIIVDGDDIPPPARDFRDLR----LPEPMLRKLRERGIVQPTPIQVQGLPVVLSG 210
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 211 RDMIGIAFTGSGKTLVFVLPLIM 233
>gi|226502378|ref|NP_001147853.1| ATP-dependent RNA helicase DDX41 [Zea mays]
gi|195614138|gb|ACG28899.1| ATP-dependent RNA helicase DDX41 [Zea mays]
Length = 616
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR+K++I V G ++P P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 153 FRRKWHIIVDGDDIPPPARDFRDLR----LPEPMLRKLRERGIVQPTPIQVQGLPVVLSG 208
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 209 RDMIGIAFTGSGKTLVFVLPLIM 231
>gi|154324248|ref|XP_001561438.1| hypothetical protein BC1G_00523 [Botryotinia fuckeliana B05.10]
gi|160419159|sp|A6RJA2.1|PRP28_BOTFB RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
Length = 783
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 10/113 (8%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFV--KLSSRFGCESYLLRNLAELGY 156
++K+L ERD +F++ +NI G +P+P+R + KL R LL + ++GY
Sbjct: 347 SEKKLEHMRERDWRIFKEDFNISTKGGAIPNPMRNWSESKLPKR------LLDVIHQVGY 400
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFC 209
EP+ +QR AIP+ L R+ A TGSGKT AFL P+L+ + L P + F
Sbjct: 401 DEPSAVQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL-PPLNEFT 452
>gi|143636073|gb|ABO93350.1| vasa-like protein [Hydractinia echinata]
Length = 680
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/105 (39%), Positives = 65/105 (61%), Gaps = 7/105 (6%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNI--HVSG-ANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+A++++ K I + F NI V+G N+P+ +R+F S G + +N+ +
Sbjct: 185 PSEAEEDMYKTIAQGINFDNYDNIPVEVTGPGNIPAAIRSF----SEAGLSESIQKNIEK 240
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
Y +PTP+Q+ AIP++L DR+ +CA TGSGKT AFL P+L +
Sbjct: 241 AKYLKPTPVQKYAIPIILGDRDLMSCAQTGSGKTAAFLLPVLASI 285
>gi|90409157|ref|ZP_01217275.1| lipoate-protein ligase A, partial [Psychromonas sp. CNPT3]
gi|90309743|gb|EAS37910.1| lipoate-protein ligase A [Psychromonas sp. CNPT3]
Length = 321
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/61 (52%), Positives = 46/61 (75%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G +L+ ++ELGYK+PTPIQ +AIPV+L R+ ACA TG+GKT AF+ P+L +L
Sbjct: 4 SKLGLSPQILQAISELGYKKPTPIQEKAIPVILKGRDVIACAQTGTGKTGAFVLPILERL 63
Query: 199 R 199
+
Sbjct: 64 K 64
>gi|307548813|dbj|BAJ19133.1| vasa [Misgurnus anguillicaudatus]
Length = 644
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 189 VDVSGSNPPKAIMTFDEAGL---CES-LNKNVVKSGYTKPTPVQKHGIPIISAGRDLMAC 244
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 245 AQTGSGKTAAFLLPILQRLMTDGVAASKFSEV 276
>gi|367019066|ref|XP_003658818.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
gi|347006085|gb|AEO53573.1| hypothetical protein MYCTH_2295090 [Myceliophthora thermophila ATCC
42464]
Length = 707
Score = 75.5 bits (184), Expect = 1e-11, Method: Composition-based stats.
Identities = 47/121 (38%), Positives = 69/121 (57%), Gaps = 13/121 (10%)
Query: 86 VDKEKEKVEDGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCE 144
V K E+ G ++K+L + ERD +F++ + I G ++P+P+R++ E
Sbjct: 224 VKKIAERKNFGKHWSEKKLEEMKERDWRIFKENFGIATKGGSIPNPMRSWE--------E 275
Query: 145 SYLLRNLAEL----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
S L R L ++ GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ +
Sbjct: 276 SNLPRRLLDIVHSVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISE 335
Query: 201 L 201
L
Sbjct: 336 L 336
>gi|402238461|gb|AFQ38974.1| vasa [Scophthalmus maximus]
Length = 631
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/94 (42%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 120 IHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ +SG N P + TF KL CES L +N+ + GY +PTP+Q+ IP++ + R+
Sbjct: 187 VDISGTNPPEAIVTFDEAKL-----CES-LRKNITKSGYAKPTPVQKHGIPIISAGRDLM 240
Query: 178 ACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
ACA TGSGKT AFL P+L +L + F EL
Sbjct: 241 ACAQTGSGKTAAFLLPILQQLMAEGVAASRFSEL 274
>gi|406860526|gb|EKD13584.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Marssonina
brunnea f. sp. 'multigermtubi' MB_m1]
Length = 839
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 42/124 (33%), Positives = 71/124 (57%), Gaps = 12/124 (9%)
Query: 86 VDKEKEKVEDGPSK-------AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKL 137
++ E+ + ED + ++K+L ERD +F++ +NI G ++P+P+R +
Sbjct: 347 MEMERRRKEDAGGRNSLEKHWSEKKLEHMRERDWRIFKEDFNISTKGGSIPNPMRNW--- 403
Query: 138 SSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
G LL +A++GY +P+ +QR AIP+ L +R+ A TGSGKT AFL P+L+
Sbjct: 404 -GESGLPKRLLDVVAQVGYDQPSAVQRAAIPIALQNRDLIGVAVTGSGKTAAFLLPLLVY 462
Query: 198 LRVL 201
+ L
Sbjct: 463 ISEL 466
>gi|330925821|ref|XP_003301209.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
gi|311324270|gb|EFQ90696.1| hypothetical protein PTT_12655 [Pyrenophora teres f. teres 0-1]
Length = 690
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L ERD +F++ + I G ++P+P+R + G L+R + ++GY E
Sbjct: 236 SEKRLENMRERDWRIFKEDFQIATKGGSIPNPMRNW----QEAGLPDQLMRIVDQVGYTE 291
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQR AIP+ L R+ A TGSGKT AFL P+L
Sbjct: 292 PTPIQRAAIPIALQCRDLIGVAKTGSGKTAAFLLPLL 328
>gi|451848500|gb|EMD61805.1| hypothetical protein COCSADRAFT_224467 [Cochliobolus sativus
ND90Pr]
Length = 704
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 43/117 (36%), Positives = 65/117 (55%), Gaps = 11/117 (9%)
Query: 86 VDKEKEKVEDGPSK------AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
+D E+ + E G ++K L ERD +F++ +NI G ++P+P+R +
Sbjct: 228 IDMERRRKEKGGRAQLDKHWSEKRLENMRERDWRIFKEDFNIATKGGSIPNPMRNW---- 283
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
G L+R + +GY EP+PIQR AIP+ L R+ A TGSGKT AF+ P+L
Sbjct: 284 DEAGLPDKLMRIVDRVGYTEPSPIQRAAIPIALQCRDLIGVARTGSGKTAAFVLPLL 340
>gi|189205421|ref|XP_001939045.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187975138|gb|EDU41764.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 690
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 58/97 (59%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L ERD +F++ + I G ++P+P+R + G L+R + ++GY E
Sbjct: 236 SEKRLENMRERDWRIFKEDFQIATKGGSIPNPMRNW----QEAGLPDQLMRIVDQVGYTE 291
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQR AIP+ L R+ A TGSGKT AFL P+L
Sbjct: 292 PTPIQRAAIPIALQCRDLIGVAKTGSGKTAAFLLPLL 328
>gi|14211584|dbj|BAB56110.1| vasa short form [Oreochromis niloticus]
Length = 621
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 146 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 200
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 201 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQL 245
>gi|158796|gb|AAA29013.1| Mab4611 antigen (vasa) [Drosophila melanogaster]
Length = 648
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 117 KYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
KYN + V+G++VP P++ F R ++ N+ + GYK PTPIQ+ +IPV+ S
Sbjct: 214 KYNNIPVKVTGSDVPQPIQHFTSADLR----DIIIDNVNKSGYKIPTPIQKCSIPVISSG 269
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L KL
Sbjct: 270 RDLMACAQTGSGKTAAFLLPILSKL 294
>gi|294886917|ref|XP_002771918.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239875718|gb|EER03734.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 521
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 114 FRKKYNIH-VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
R+K++I V+G NVP P+ TF + G Y+L LA+ G+ PTPIQ Q PV +S
Sbjct: 97 IRRKHDITIVAGRNVPRPIVTF----EQAGFPDYILHELAQAGFVAPTPIQIQGWPVAMS 152
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLAFL P ++ +
Sbjct: 153 GRDMVGIAETGSGKTLAFLLPAIVHI 178
>gi|24584399|ref|NP_723899.1| vasa, isoform A [Drosophila melanogaster]
gi|442627874|ref|NP_001260458.1| vasa, isoform C [Drosophila melanogaster]
gi|12644110|sp|P09052.3|VASA1_DROME RecName: Full=ATP-dependent RNA helicase vasa, isoform A; AltName:
Full=Antigen Mab46F11
gi|7298204|gb|AAF53438.1| vasa, isoform A [Drosophila melanogaster]
gi|440213801|gb|AGB92993.1| vasa, isoform C [Drosophila melanogaster]
Length = 661
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/85 (47%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 117 KYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
KYN + V+G++VP P++ F R ++ N+ + GYK PTPIQ+ +IPV+ S
Sbjct: 227 KYNNIPVKVTGSDVPQPIQHFTSADLR----DIIIDNVNKSGYKIPTPIQKCSIPVISSG 282
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L KL
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKL 307
>gi|426348586|ref|XP_004041913.1| PREDICTED: probable ATP-dependent RNA helicase DDX52 [Gorilla
gorilla gorilla]
Length = 551
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 101/228 (44%), Gaps = 47/228 (20%)
Query: 8 LFAGVSFDKKKFVTDFARFKENK-----ESENLADDFSFVEGEKTDP------------- 49
L AG FD ++F D ARF+ K +S + F +K+ P
Sbjct: 10 LGAGAKFDTRRFSADAARFQIGKRKYDFDSSEVLQGLDFFGNKKSVPGVCGASQTHQKPQ 69
Query: 50 --EKAMVSFVK------KRKRKSIAGETV---EGFNVFKSSKQLVPAVDKEKEKVEDGPS 98
EK S + K+KRK++ E EG + Q + +V+ K+ED
Sbjct: 70 NGEKKEESLTERKREQSKKKRKTMTSEIASQEEGATI-----QWMSSVEA---KIEDKKV 121
Query: 99 KAKKEL------NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLA 152
+ + +L N + E+ R K+ IHV G ++P P+ TF +L + S LL+N+
Sbjct: 122 QRESKLTSGKLENLRKEKINFLRNKHKIHVQGTDLPDPIATFQQLDQEYKINSRLLQNIL 181
Query: 153 ELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
+ G++ PTPIQ QAIPV+L G+G F M+ K V
Sbjct: 182 DAGFQMPTPIQMQAIPVMLHIHRELIKISEGTG----FRIHMIHKAAV 225
>gi|332028992|gb|EGI69006.1| ATP-dependent RNA helicase vasa [Acromyrmex echinatior]
Length = 795
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P P+++F + G + LL N+ + GY +PTP+Q+ AIP++++ ++ AC
Sbjct: 274 VKVSGENAPRPIQSF----DQSGLRTILLENIKKSGYTKPTPVQKYAIPIIMNGQDLMAC 329
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ P+L L
Sbjct: 330 AQTGSGKTAAFVVPILHTL 348
>gi|11990882|dbj|BAB19807.1| vasa [Oreochromis niloticus]
Length = 645
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 170 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 224
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 225 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQL 269
>gi|449019765|dbj|BAM83167.1| ATP-dependent RNA helicase [Cyanidioschyzon merolae strain 10D]
Length = 627
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG NV + +F G + LLRN+A GY++PTP+QR AIP +++ R+ +C
Sbjct: 156 VEVSGENVVPEIMSF----ETSGMDKILLRNVALSGYRKPTPVQRHAIPTVMAGRDLMSC 211
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIP 204
A TGSGKT AF+ P+L ++ ++ P
Sbjct: 212 AQTGSGKTAAFVLPVLHQMLLMGGP 236
>gi|63100504|gb|AAH95001.1| Vasa protein [Danio rerio]
Length = 306
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 53/79 (67%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 232 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 287
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +L
Sbjct: 288 AQTGSGKTAAFLLPILQRL 306
>gi|378579002|ref|ZP_09827673.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
gi|377818357|gb|EHU01442.1| RNA helicase [Pantoea stewartii subsp. stewartii DC283]
Length = 449
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/58 (56%), Positives = 41/58 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTP+QRQAIPV+LS R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPVQRQAIPVVLSGRDLLASAQTGTGKTAGFTLPLLQKL 63
>gi|317047409|ref|YP_004115057.1| DEAD/DEAH box helicase [Pantoea sp. At-9b]
gi|316949026|gb|ADU68501.1| DEAD/DEAH box helicase domain protein [Pantoea sp. At-9b]
Length = 451
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY+EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLNADILRAVAEQGYREPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQRL 63
>gi|430812755|emb|CCJ29835.1| unnamed protein product [Pneumocystis jirovecii]
Length = 631
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG +VP P+ F +S+LL N+ YK PTP+Q+ +I +++ DR+ AC
Sbjct: 145 VEVSGTDVPEPISVFTSPP----LDSHLLSNIELANYKNPTPVQKHSISIVIQDRDLMAC 200
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT FL P+L K+
Sbjct: 201 AQTGSGKTGGFLFPILSKM 219
>gi|303279012|ref|XP_003058799.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459959|gb|EEH57254.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 485
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 52/87 (59%), Gaps = 4/87 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A R K+ I VSG + PSP+ TF + S Y+L L G+ PTPIQ QA P +L
Sbjct: 40 ASHRAKHAIAVSGRDPPSPITTFEEAS----FPDYVLSELRAAGFPTPTPIQSQAWPTVL 95
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
S R+ A A TGSGKTL+FL P ++ +
Sbjct: 96 SGRDVVAVAETGSGKTLSFLLPAVVHV 122
>gi|308808636|ref|XP_003081628.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
gi|116060093|emb|CAL56152.1| ATP-dependent RNA helicase (ISS) [Ostreococcus tauri]
Length = 592
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 60/103 (58%), Gaps = 4/103 (3%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K+L ERD +FR+ +NI G +P P+R + + + G +LR + ++GY +
Sbjct: 123 SDKKLEDMTERDWRIFREDFNISYKGGRLPLPMRAWDECA---GLPKEILRAIEKVGYVK 179
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+PIQ +IP+ L R+ A TGSGKT AF+ PML + L
Sbjct: 180 PSPIQMASIPIGLLKRDVIGIAETGSGKTCAFVVPMLAHIMQL 222
>gi|353240957|emb|CCA72800.1| probable U5 snRNP 100 kD protein [Piriformospora indica DSM 11827]
Length = 724
Score = 75.1 bits (183), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/97 (41%), Positives = 62/97 (63%), Gaps = 5/97 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ +RD + + ++I G N+P PLR++ + S +L +A +GY++
Sbjct: 270 SEKPLSEMKDRDWRILKADFSISARGGNIPYPLRSWDESS----IPPQILDVIARIGYEQ 325
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
PTPIQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 326 PTPIQRQAIPIGLQNRDLIGIAETGSGKTAAFVIPML 362
>gi|168053931|ref|XP_001779387.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162669185|gb|EDQ55777.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 741
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 56/90 (62%), Gaps = 4/90 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E A +R I VSG +V P++TF L G ++ L+ +++ GY+ PTPIQ Q+ P
Sbjct: 211 EEVAAYRNSLAIRVSGFDVSRPVKTFEDL----GFDASLMGAISKQGYERPTPIQCQSCP 266
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
++LS R+ A TGSGKT AF+ PM++ +
Sbjct: 267 IVLSGRDLIGIAKTGSGKTAAFVLPMMVHI 296
>gi|76781331|gb|ABA54551.1| vasa-like protein [Monopterus albus]
Length = 618
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+ VSG N P + TF + CE+ L RN+++ GY +PTP+Q+ IP++ + R+ A
Sbjct: 179 TVDVSGPNPPKAIMTFDEAEL---CET-LRRNVSKSGYVKPTPVQKHGIPIISAGRDLMA 234
Query: 179 CAPTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
CA TGSGKT +FL P+L +L V + F EL
Sbjct: 235 CAQTGSGKTASFLLPILQQLMVDGVAASCFSEL 267
>gi|159463464|ref|XP_001689962.1| predicted protein [Chlamydomonas reinhardtii]
gi|158283950|gb|EDP09700.1| predicted protein [Chlamydomonas reinhardtii]
Length = 567
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A +R++++I V G +VP PL+TF + G +L + G+K PTPIQ QA P+ L
Sbjct: 105 ADYRRQHDISVQGDHVPEPLQTFESV----GFPPDILDEIRRAGFKSPTPIQAQAWPIAL 160
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLR 199
S R+ A A TGSGKT FL P ++ ++
Sbjct: 161 SGRDLVAIAKTGSGKTCGFLLPGMLHIQ 188
>gi|396925106|gb|AFN89211.1| vasa [Solea senegalensis]
Length = 648
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 40/92 (43%), Positives = 58/92 (63%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
++VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 199 VNVSGTNPPQAIMTFEEAAL---CES-LNKNISKSGYVKPTPVQKHGIPIISAGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL PML +L + F EL
Sbjct: 255 AQTGSGKTAAFLLPMLQRLMADGVAGSRFSEL 286
>gi|398791375|ref|ZP_10552120.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
gi|398215429|gb|EJN01992.1| DNA/RNA helicase, superfamily II [Pantoea sp. YR343]
Length = 462
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY+EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLSADILRAVAEQGYQEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQRL 63
>gi|398800298|ref|ZP_10559570.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
gi|398095465|gb|EJL85801.1| DNA/RNA helicase, superfamily II [Pantoea sp. GM01]
Length = 463
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY+EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLSADILRAVAEQGYQEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQRL 63
>gi|257815096|gb|ACV69940.1| vasa [Osphronemus goramy]
Length = 653
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CE+ L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 206 VDVSGTNPPQAILTFDEAAL---CET-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 261
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 262 AQTGSGKTAAFLLPILQQLMADGVAASRFSEL 293
>gi|340521284|gb|EGR51519.1| predicted protein [Trichoderma reesei QM6a]
Length = 1247
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/187 (30%), Positives = 92/187 (49%), Gaps = 31/187 (16%)
Query: 20 VTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSS 79
T A+ ++ E+ DD++F E + + A+++ KRK+K I
Sbjct: 519 TTSIAKKQQEPEAYFSDDDYAFNEQGDQEADAALLAIANKRKKKDI-------------- 564
Query: 80 KQLVPAVDKEKEKVEDGPSKAK-----KELNKQIERD-AVFRKKYN-IHVSGANVPSPLR 132
P VD K ++ P + EL+ E + A R + + I V+G +VP P++
Sbjct: 565 ----PTVDYSKLDLQ--PIRKNFWVEPAELSNLSEAEVADLRMELDGIKVNGKDVPKPVQ 618
Query: 133 TFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLC 192
+ S+ G L ++ LG+ +PTPIQ QA+P L+S R+ A TGSGKT+AFL
Sbjct: 619 KW----SQCGLTRQTLDVISSLGFDKPTPIQMQALPALMSGRDVVGVAKTGSGKTMAFLL 674
Query: 193 PMLMKLR 199
PM ++
Sbjct: 675 PMFRHIK 681
>gi|290987818|ref|XP_002676619.1| predicted protein [Naegleria gruberi]
gi|284090222|gb|EFC43875.1| predicted protein [Naegleria gruberi]
Length = 493
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 85/153 (55%), Gaps = 12/153 (7%)
Query: 50 EKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEK---EKVEDGPSKAKKELNK 106
EK +SF K +T + ++ SS V K+K +K+ED + +K +N+
Sbjct: 6 EKTKISFEWDEK-----DDTTDKNSIISSSHSTVKNNQKKKIRKDKIEDERNWTEKSVNE 60
Query: 107 QIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQ 165
+RD +FR+ ++I V G VP PLR++ + ++ E ++ + +L +KEPT +Q+Q
Sbjct: 61 MTDRDWRIFREDFDIVVKGGRVPPPLRSWDE-TTLLPLE--IINAITDLKFKEPTAVQKQ 117
Query: 166 AIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IP+ ++ + A TGSGKT +++ PM ++
Sbjct: 118 CIPIAMNGIDLVGLAETGSGKTASYIIPMCCQI 150
>gi|224090572|ref|XP_002187022.1| PREDICTED: probable ATP-dependent RNA helicase DDX4 [Taeniopygia
guttata]
Length = 492
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/80 (41%), Positives = 55/80 (68%), Gaps = 4/80 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+ VSG + P+PL +F + C++ L N+++ GY +PTP+Q+ +IP++L+ R+ A
Sbjct: 54 TVQVSGQDAPAPLMSFADTNM---CDT-LTMNISKAGYWKPTPVQKYSIPIILAGRDLMA 109
Query: 179 CAPTGSGKTLAFLCPMLMKL 198
CA TGSGKT AFL P++ ++
Sbjct: 110 CAQTGSGKTAAFLVPVVAQM 129
>gi|164657065|ref|XP_001729659.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
gi|159103552|gb|EDP42445.1| hypothetical protein MGL_3203 [Malassezia globosa CBS 7966]
Length = 560
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 12/109 (11%)
Query: 99 KAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++++E+N+ FR+ I + G+NVP P+ TF G Y++R + +LG+ E
Sbjct: 109 RSEQEVNE-------FRRAKEITLRGSNVPRPVTTF----EETGYPDYIMREINKLGFTE 157
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
P+ IQ QA P+ LS R+ A A TGSGKT+ F P ++ ++ P Y
Sbjct: 158 PSAIQSQAWPLALSGRDLVAIAETGSGKTIGFALPSILHIKAQ-APLQY 205
>gi|156543608|ref|XP_001604318.1| PREDICTED: ATP-dependent RNA helicase abstrakt [Nasonia
vitripennis]
Length = 594
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 54/93 (58%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
L K R R+K+ I V G +VP PLR+F ++ G +L L + G +PTPIQ
Sbjct: 151 LTKDNVRHERIRRKFGITVEGEDVPPPLRSFKEMKFHKG----ILLGLEQKGITKPTPIQ 206
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F+ P++M
Sbjct: 207 VQGIPAVLSGRDIIGIAFTGSGKTLVFVLPLIM 239
>gi|346322626|gb|EGX92225.1| DEAD/DEAH box helicase, putative [Cordyceps militaris CM01]
Length = 744
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 45/116 (38%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A DK +++ E G +K L++ ERD +F++ + I G +P+P+R +
Sbjct: 242 ARDKARDRAERTGLGRRWNEKRLDEMRERDWRIFKEDFGISTKGGTLPNPMRNW----KE 297
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G LL + +GY+EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 298 SGLPPRLLAIIEHVGYEEPTPIQRAAIPIALLARDLIGVAVTGSGKTAAFLLPLLV 353
>gi|76154434|gb|AAX25917.2| SJCHGC05131 protein [Schistosoma japonicum]
Length = 269
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK+ ++ P A + ++E +A FRKKY + +SG +VP P+ +F +LS Y+L
Sbjct: 46 EKKFYQEHPLSASR---PEVEVEA-FRKKYKMSLSGRDVPRPVLSFNELS----VPDYIL 97
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+A+ G++ PTPIQ Q P+ LS R+ A TGSGKT FL P ++ +
Sbjct: 98 SVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTATFLLPAVIHI 147
>gi|342890185|gb|EGU89049.1| hypothetical protein FOXB_00461 [Fusarium oxysporum Fo5176]
Length = 723
Score = 74.7 bits (182), Expect = 2e-11, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 66/116 (56%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A DK +++ + G ++K L ERD +F++ + I G +P+P+R++
Sbjct: 237 ARDKARQRADRTGLGKRWSEKSLEDMRERDWRIFKEDFGIATKGGMIPNPMRSW----QE 292
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL + ++GYKEPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 293 SNLPKRLLNIVEDVGYKEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 348
>gi|329295987|ref|ZP_08253323.1| ATP-dependent RNA helicase RhlE [Plautia stali symbiont]
Length = 408
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 42/58 (72%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY+EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLNADILRAVAEQGYREPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLQRL 63
>gi|302922639|ref|XP_003053509.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
gi|256734450|gb|EEU47796.1| hypothetical protein NECHADRAFT_74731 [Nectria haematococca mpVI
77-13-4]
Length = 1201
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 86/170 (50%), Gaps = 32/170 (18%)
Query: 37 DDFSFVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDG 96
D+++F + E DP A+++ KRK+K I P +D K VE
Sbjct: 522 DEYNFNKEENGDP-NALLAMTAKRKKKDI------------------PTIDYTK--VEIQ 560
Query: 97 PSKAK-----KELNKQIERDAV-FRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLLR 149
P + EL++ E + R + + I V+G +VP P++ + ++ G L
Sbjct: 561 PIRKNFWVEPAELSQLTETEVTDLRLELDGIKVNGKDVPKPVQKW----AQCGLTRQTLD 616
Query: 150 NLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ LGY++PTPIQ QA+P L+S R+ A TGSGKT+AFL PM ++
Sbjct: 617 VIDNLGYEKPTPIQMQALPALMSGRDVIGVAKTGSGKTVAFLLPMFRHIK 666
>gi|195147728|ref|XP_002014827.1| GL19380 [Drosophila persimilis]
gi|194106780|gb|EDW28823.1| GL19380 [Drosophila persimilis]
Length = 437
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 52/78 (66%), Gaps = 4/78 (5%)
Query: 124 GANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTG 183
G +P+P+R++ + G ++ + ++GYKEPTPIQRQAIP+ L +R+ A TG
Sbjct: 1 GGRIPNPIRSW----NESGFPPEIIDIIDKVGYKEPTPIQRQAIPIGLQNRDIIGVAETG 56
Query: 184 SGKTLAFLCPMLMKLRVL 201
SGKTLAFL P+L ++ L
Sbjct: 57 SGKTLAFLIPLLSWIQSL 74
>gi|118785473|ref|XP_314684.3| AGAP008578-PA [Anopheles gambiae str. PEST]
gi|116127754|gb|EAA10198.3| AGAP008578-PA [Anopheles gambiae str. PEST]
Length = 596
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + +F R G ++ N+ + Y +PTPIQR AIP++L+ R+ AC
Sbjct: 162 VRVSGENPPDHVESF----ERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMAC 217
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ PM+ L
Sbjct: 218 AQTGSGKTAAFMLPMIHHL 236
>gi|65306809|gb|AAY41942.1| vasa-like protein [Anopheles gambiae]
Length = 596
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + +F R G ++ N+ + Y +PTPIQR AIP++L+ R+ AC
Sbjct: 162 VRVSGENPPDHVESF----ERSGLREEVMTNVRKSSYTKPTPIQRYAIPIILNGRDLMAC 217
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ PM+ L
Sbjct: 218 AQTGSGKTAAFMLPMIHHL 236
>gi|381405224|ref|ZP_09929908.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
gi|380738423|gb|EIB99486.1| ATP-dependent RNA helicase RhlE [Pantoea sp. Sc1]
Length = 453
Score = 74.7 bits (182), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 42/65 (64%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L KL
Sbjct: 6 LGLSADILRAVAEQGYSEPTPIQRQAIPVVLAGRDLLASAQTGTGKTAGFTLPLLEKLSA 65
Query: 201 LFIPF 205
P
Sbjct: 66 TTTPV 70
>gi|336374435|gb|EGO02772.1| hypothetical protein SERLA73DRAFT_176143 [Serpula lacrymans var.
lacrymans S7.3]
gi|336387328|gb|EGO28473.1| hypothetical protein SERLADRAFT_458915 [Serpula lacrymans var.
lacrymans S7.9]
Length = 564
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 88/191 (46%), Gaps = 16/191 (8%)
Query: 10 AGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVK--KRKRKSIAG 67
GV FD++KF D FK ++ + S G E + K KRK+ G
Sbjct: 10 GGVQFDRQKFKKDIELFKAPQK--DTGKSVSVAGGSGLPAELDFFKYAKGGTGKRKTSDG 67
Query: 68 ETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANV 127
E + + K + ++ KV+D + +Q+ R V K G++V
Sbjct: 68 SDEEKIDDGEGRKG-----EGKRRKVDDEGDGDGDDEEQQMPRHRVTTK-------GSDV 115
Query: 128 PSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKT 187
P + F L R+ LL NL++ YK PT IQ IP+LL R+ A +PTG+GKT
Sbjct: 116 PEHIEVFEALRERYHTPGRLLSNLSDNKYKHPTGIQSYGIPILLEGRDLAAISPTGTGKT 175
Query: 188 LAFLCPMLMKL 198
L++L P++ L
Sbjct: 176 LSYLVPIVSSL 186
>gi|449295433|gb|EMC91455.1| hypothetical protein BAUCODRAFT_80305 [Baudoinia compniacensis UAMH
10762]
Length = 776
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 38/103 (36%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L++ ERD +F++ +NI G ++P+P+R++ + G LL + +GY E
Sbjct: 308 SEKRLDQMRERDWRIFKEDFNISTKGGSIPNPMRSW----AESGLPKRLLDVVDAVGYAE 363
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+ +QR AIP+ + R+ A TGSGKT AFL P+L+ + L
Sbjct: 364 PSAVQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISEL 406
>gi|334310946|ref|XP_001370541.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Monodelphis domestica]
Length = 1179
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 52/86 (60%), Gaps = 7/86 (8%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I V G P P++T+V+ G +L +L + GY++PTPIQ QAIP ++S R+
Sbjct: 507 GITVKGKGCPKPIKTWVQC----GISMKILNSLKKHGYEKPTPIQAQAIPAIMSGRDLIG 562
Query: 179 CAPTGSGKTLAFLCPM---LMKLRVL 201
A TGSGKT+AFL PM +M R L
Sbjct: 563 IAKTGSGKTIAFLLPMFRHIMDQRAL 588
>gi|339234397|ref|XP_003382315.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
gi|316978689|gb|EFV61638.1| DEAD-box ATP-dependent RNA helicase 57 [Trichinella spiralis]
Length = 627
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/201 (36%), Positives = 102/201 (50%), Gaps = 20/201 (9%)
Query: 1 MEKGA-SFLFAGVSFDKKKFVTDFARFKENKESENLADDFSFVEGEKTDPEKAMVSFVKK 59
M+K A S L G FD+K+F D + + K S D S G K D S
Sbjct: 50 MQKSAFSCLGFGAKFDRKRFRADAEKLRLTKCS---VADSSVKNGSKQDKN----SNNDS 102
Query: 60 RKRKSIAGETVEGFNVF-----KSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVF 114
++ S ET +G +F ++S L+P D+ K E + K +K+ V
Sbjct: 103 EEKISNLLET-DGVKIFEKSAKRTSSLLLPN-DENKILSETVDTVFPKSSSKEQSVQEV- 159
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS-- 172
R+K+ I V G ++P P +F +L + + L++N+ L + PTPIQ QAIPVLL+
Sbjct: 160 RRKHRIFVFGDDIPPPCCSFEELYALLVPK--LVQNVKALNFCAPTPIQMQAIPVLLAVK 217
Query: 173 DRECFACAPTGSGKTLAFLCP 193
RE A APTGSGKTLAFL P
Sbjct: 218 GREVMASAPTGSGKTLAFLIP 238
>gi|357623365|gb|EHJ74551.1| putative ATP-dependent RNA helicase abstrakt [Danaus plexippus]
Length = 613
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER R++ I V G NVP P+RTF + G +L+ L G K+PTPIQ Q IP
Sbjct: 152 ERHERVRRELRIQVEGENVPPPIRTFRHMKFPKG----ILQGLEAKGIKKPTPIQVQGIP 207
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 208 AVLSGRDMIGIAFTGSGKTLVFTLPIIM 235
>gi|395736563|ref|XP_002816330.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pongo abelii]
Length = 802
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 333 LNMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQ 388
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 389 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 421
>gi|395146553|gb|AFN53706.1| putative dead box ATP-dependent RNA helicase [Linum usitatissimum]
Length = 1272
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 52/82 (63%), Gaps = 5/82 (6%)
Query: 115 RKKYNIHVSGAN-VPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RKK +IHV G + VP P+ +F S + S LL+N+ G+ PTP+Q QAIP+ LS
Sbjct: 406 RKKLDIHVKGDDTVPPPMLSF----SSWNLPSKLLQNIESAGFDVPTPVQMQAIPIGLSG 461
Query: 174 RECFACAPTGSGKTLAFLCPML 195
+ A A TGSGKT +FL P++
Sbjct: 462 KSLLASAETGSGKTASFLVPII 483
>gi|318056099|gb|ADV36250.1| Vasa [Gadus morhua]
Length = 644
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 39/79 (49%), Positives = 52/79 (65%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + CES L RN+A+ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 196 VDVSGLNPPQAIYTFKEACL---CES-LERNVAKSGYVKPTPVQKHGIPIIAAGRDIMAC 251
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 252 AQTGSGKTAAFLLPILQKL 270
>gi|19075484|ref|NP_587984.1| U5 snRNP-associated protein Prp28 (predicted) [Schizosaccharomyces
pombe 972h-]
gi|74654533|sp|Q9Y7T7.1|PRP28_SCHPO RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp28
gi|4539604|emb|CAB40015.1| U5 snRNP-associated protein Prp28 (predicted) [Schizosaccharomyces
pombe]
Length = 662
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 44/125 (35%), Positives = 72/125 (57%), Gaps = 6/125 (4%)
Query: 79 SKQLVPAVDKEKEKVE-DGPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVK 136
+ +L+ +K +K++ D +K L RD + ++ YNI + G ++P+PLR +
Sbjct: 194 AHELIQLQEKRAKKIDWDDVPWREKPLEAMKPRDWRILKEDYNISIKGDDLPNPLRNW-- 251
Query: 137 LSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
G S +L+ L ++ YKEP+ IQR AIPVLL ++ A TGSGKT AF+ P+++
Sbjct: 252 --EEAGLPSEMLKVLKKVNYKEPSSIQRAAIPVLLQRKDLIGIAETGSGKTAAFIIPLII 309
Query: 197 KLRVL 201
+ L
Sbjct: 310 AISKL 314
>gi|119582643|gb|EAW62239.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_b [Homo
sapiens]
Length = 471
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFR-KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 304 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 359
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 360 SGRDLIGIAKTGSGKTIAFLLPM 382
>gi|395861175|ref|XP_003802869.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Otolemur
garnettii]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|238836384|gb|ACR61400.1| vasa [Ctenopharyngodon idella]
Length = 670
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 56/94 (59%), Gaps = 8/94 (8%)
Query: 120 IHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ VSG+N P + TF KL CES L +N+ + GY +PTP+Q+ IP++ + R+
Sbjct: 221 VEVSGSNAPKAIMTFDEAKL-----CES-LSKNVTKSGYVKPTPVQKYGIPIISAGRDLM 274
Query: 178 ACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
ACA TGSGKT AFL P+L + + F E+
Sbjct: 275 ACAQTGSGKTAAFLLPILQRFMTDGVAASKFSEV 308
>gi|367042554|ref|XP_003651657.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
gi|346998919|gb|AEO65321.1| hypothetical protein THITE_2112188 [Thielavia terrestris NRRL 8126]
Length = 1193
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 48/124 (38%), Positives = 73/124 (58%), Gaps = 13/124 (10%)
Query: 83 VPAVDKEKEKVEDGPSKAK-----KELNKQIERDAV-FRKKYN-IHVSGANVPSPLRTFV 135
+P VD K +E P + +EL++ E +A R + + I VSG NVP P++ +
Sbjct: 506 IPTVDYSK--IELNPIRKNFWVEPQELSQMTEEEAADLRLELDGIKVSGKNVPRPVQKW- 562
Query: 136 KLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
S+ G +L + LGY++PTPIQ QA+PV++S R+ A TGSGKT+AF+ PML
Sbjct: 563 ---SQCGLTRPILDTIEGLGYEKPTPIQMQALPVIMSGRDVIGVAKTGSGKTMAFVLPML 619
Query: 196 MKLR 199
++
Sbjct: 620 RHIK 623
>gi|205277319|ref|NP_001034520.2| vasa RNA helicase [Tribolium castaneum]
gi|270011102|gb|EFA07550.1| vasa [Tribolium castaneum]
Length = 627
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G + P P+ +F G +LL N+ + GY +PT IQ+ AIPV+LS R+ +C
Sbjct: 194 VKVTGNDAPPPITSF----ETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSC 249
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ P++ L
Sbjct: 250 AQTGSGKTAAFMLPIIHNL 268
>gi|157278092|ref|NP_001098146.1| VASA [Oryzias latipes]
gi|14522857|dbj|BAB61047.1| VASA [Oryzias latipes]
Length = 617
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 57/94 (60%), Gaps = 8/94 (8%)
Query: 120 IHVSGANVPSPLRTF--VKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECF 177
+ VSG N+P+ + TF KL CES L N++ GY +PTP+Q+ +P++ + R+
Sbjct: 169 VDVSGTNLPAAIMTFEEAKL-----CES-LENNISRSGYVKPTPVQKYGLPIISAGRDLM 222
Query: 178 ACAPTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
ACA TGSGKT AFL P+L +L + F E+
Sbjct: 223 ACAQTGSGKTAAFLLPILQQLMADGVAASRFSEI 256
>gi|395736192|ref|XP_003780666.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Pongo abelii]
Length = 1014
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 332 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 387
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 388 SGRDLIGIAKTGSGKTIAFLLPM 410
>gi|299749479|ref|XP_002911384.1| RNA helicase [Coprinopsis cinerea okayama7#130]
gi|298408458|gb|EFI27890.1| RNA helicase [Coprinopsis cinerea okayama7#130]
Length = 425
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 53/95 (55%), Gaps = 6/95 (6%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR+ +I V G NVP P+R+F G YL+ + G+ PTPIQ QA P+ LS
Sbjct: 90 FRRSKDIRVQGRNVPRPIRSF----DECGFPEYLMSTIRAQGFDAPTPIQCQAWPMALSG 145
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
R+ A A TGSGKT++F P ++ + L P D
Sbjct: 146 RDVVAIAQTGSGKTISFALPAMLHINAQPLLAPGD 180
>gi|417411966|gb|JAA52400.1| Putative atp-dependent rna helicase, partial [Desmodus rotundus]
Length = 620
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 156 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 211
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 212 TILSGRDMIGIAFTGSGKTLVFTLPVIM 239
>gi|307190551|gb|EFN74538.1| ATP-dependent RNA helicase DDX42 [Camponotus floridanus]
Length = 769
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+K I VSG + P+P+ +F FG + L++ + + Y +PTPIQ QA+P LS
Sbjct: 236 LKKTLGIKVSGPSPPNPVTSF----GHFGFDDALMKTIRKNEYTQPTPIQAQAVPAALSG 291
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ PML+ +
Sbjct: 292 RDIIGIAKTGSGKTAAFIWPMLVHI 316
>gi|119895518|ref|XP_586902.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|297477226|ref|XP_002689237.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Bos taurus]
gi|296485325|tpg|DAA27440.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Bos taurus]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 58/98 (59%), Gaps = 8/98 (8%)
Query: 108 IERDAVFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQA 166
+E VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QA
Sbjct: 347 LEEVNVFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQA 402
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
IP ++S R+ A TGSGKT+AFL PM +M R L
Sbjct: 403 IPAIMSGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|402224487|gb|EJU04549.1| DEAD-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 486
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 6/95 (6%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR+K+ + + G VP P+ TF G Y+L + G+ PTPIQ QA P+ LS
Sbjct: 43 FRRKHEMKIQGRGVPKPITTF----EEAGFPDYILTTIKAQGFAAPTPIQCQAWPMALSG 98
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
R+ A A TGSGKT+AF P ++ + L P D
Sbjct: 99 RDVVAIAQTGSGKTIAFALPAMLHINAQPLLTPGD 133
>gi|344240368|gb|EGV96471.1| putative ATP-dependent RNA helicase DDX41 [Cricetulus griseus]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN ER RK+Y+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 153 LNMSEERHERVRKRYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQ 208
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 209 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|28302109|gb|AAL87139.2|AF479820_1 DEAD box RNA helicase Vasa [Cyprinus carpio]
Length = 691
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 241 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 296
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 297 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEI 328
>gi|348527894|ref|XP_003451454.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Oreochromis niloticus]
Length = 1038
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 47/75 (62%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+V+ G +L L + GY++PTPIQ QAIP ++S R+
Sbjct: 349 ITVKGKGCPKPIKTWVQC----GVSMKILNALKKHGYEKPTPIQAQAIPAIMSGRDLIGI 404
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 405 AKTGSGKTIAFLLPM 419
>gi|7022398|dbj|BAA91585.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PATILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|380798911|gb|AFE71331.1| putative ATP-dependent RNA helicase DDX41, partial [Macaca mulatta]
Length = 606
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 142 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 197
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 198 TILSGRDMIGIAFTGSGKTLVFTLPVIM 225
>gi|355750468|gb|EHH54806.1| hypothetical protein EGM_15715 [Macaca fascicularis]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|348506862|ref|XP_003440976.1| PREDICTED: probable ATP-dependent RNA helicase DDX4, partial
[Oreochromis niloticus]
Length = 478
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 3 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 57
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 58 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQL 102
>gi|408388319|gb|EKJ68005.1| hypothetical protein FPSE_11816 [Fusarium pseudograminearum CS3096]
Length = 721
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A DK +++ + G ++K L+ ERD +F++ + I G +P+P+R++
Sbjct: 237 ARDKARQRADRRGLGKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSW----QE 292
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL + ++GYK+P+PIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 293 SNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 348
>gi|301785524|ref|XP_002928176.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Ailuropoda melanoleuca]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|417405652|gb|JAA49530.1| Putative atp-dependent rna helicase [Desmodus rotundus]
Length = 1033
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 353 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQSQAIPAIM 408
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 409 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 441
>gi|344265764|ref|XP_003404952.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX41-like, partial [Loxodonta africana]
Length = 613
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|149726038|ref|XP_001502240.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Equus
caballus]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|148709275|gb|EDL41221.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 963
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 284 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 339
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 340 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 372
>gi|302782315|ref|XP_002972931.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
gi|300159532|gb|EFJ26152.1| hypothetical protein SELMODRAFT_98552 [Selaginella moellendorffii]
Length = 534
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR++ +I V G NVP P+R+F + S Y+L+ + + G+KEPT IQ Q P+ L
Sbjct: 72 FRRRKDITVQGRNVPKPVRSFAEAS----FPDYVLQEVLKAGFKEPTAIQAQGWPMALKG 127
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 128 RDLVGLAETGSGKTLAYLLPAIVHV 152
>gi|302812625|ref|XP_002987999.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
gi|300144105|gb|EFJ10791.1| hypothetical protein SELMODRAFT_269342 [Selaginella moellendorffii]
Length = 505
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
FR++ +I V G NVP P+R+F + S Y+L+ + + G+KEPT IQ Q P+ L
Sbjct: 67 FRRRKDITVQGRNVPKPVRSFAEAS----FPDYVLQEVLKAGFKEPTAIQAQGWPMALKG 122
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 123 RDLVGLAETGSGKTLAYLLPAIVHV 147
>gi|440802456|gb|ELR23385.1| DEAD/DEAH box helicase domain containing protein [Acanthamoeba
castellanii str. Neff]
Length = 568
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 47/79 (59%), Gaps = 1/79 (1%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V GAN+P PL F + L+ N+ + GY +PT +QR AIP+LL R+ C
Sbjct: 129 VEVVGANLP-PLEAFASCKPLQVKDGVLMNNITKSGYTKPTAVQRHAIPILLQGRDLMGC 187
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P++ L
Sbjct: 188 ARTGSGKTAAFLLPIIASL 206
>gi|85540944|sp|Q569Z5.2|DDX46_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
Length = 1032
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|402086720|gb|EJT81618.1| pre-mRNA-splicing ATP-dependent RNA helicase PRP28 [Gaeumannomyces
graminis var. tritici R3-111a-1]
Length = 703
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 65/103 (63%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L + +RD +F++ Y I G +P+P+R + + S+ + LLR + +GY +
Sbjct: 240 SEKSLEEMRQRDWRIFKEDYGIATKGGRIPNPMRNWHE--SKLPKD--LLRIVDLVGYTD 295
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQR AIP+ L +R+ A TGSGKT AFL P+L+ ++ L
Sbjct: 296 PTPIQRAAIPIALENRDIIGVAATGSGKTAAFLLPLLVYIQTL 338
>gi|440898373|gb|ELR49887.1| Putative ATP-dependent RNA helicase DDX41, partial [Bos grunniens
mutus]
Length = 614
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 150 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 205
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 206 TILSGRDMIGIAFTGSGKTLVFTLPVIM 233
>gi|5410326|gb|AAD43033.1| RNA helicase [Homo sapiens]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|73953218|ref|XP_536417.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 1
[Canis lupus familiaris]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|403290044|ref|XP_003936143.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Saimiri
boliviensis boliviensis]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|360044201|emb|CCD81748.1| unnamed protein product [Schistosoma mansoni]
Length = 1328
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDK-EKEKVEDGPSKAK 101
E E T E A+ KK K + I +E F K+ VP + K KE V
Sbjct: 561 EEEDTTIEDALAQLQKKDKLQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDV-------- 612
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
K +E NI V G P PLR +V+ G S LL L + +PTP
Sbjct: 613 KAYRASLE---------NIRVRGRECPKPLRNWVQA----GISSRLLACLKRNNFDKPTP 659
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IQ QA+PV++S R+ A TGSGKTLAFL P++ L
Sbjct: 660 IQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHL 696
>gi|160420299|ref|NP_666087.3| probable ATP-dependent RNA helicase DDX46 [Mus musculus]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|129277522|ref|NP_001076071.1| probable ATP-dependent RNA helicase DDX41 [Bos taurus]
gi|126717403|gb|AAI33466.1| DDX41 protein [Bos taurus]
gi|296485512|tpg|DAA27627.1| TPA: DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Bos taurus]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|355683291|gb|AER97077.1| DEAD box polypeptide 41 [Mustela putorius furo]
Length = 621
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|354471891|ref|XP_003498174.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Cricetulus griseus]
Length = 1029
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 350 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 405
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 406 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 438
>gi|296193469|ref|XP_002744529.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Callithrix
jacchus]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|291387348|ref|XP_002710262.1| PREDICTED: DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Oryctolagus
cuniculus]
Length = 1030
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 351 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 406
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 407 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 439
>gi|402872563|ref|XP_003900179.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Papio anubis]
Length = 984
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|417515860|gb|JAA53735.1| putative ATP-dependent RNA helicase DDX41 [Sus scrofa]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|302815317|ref|XP_002989340.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
gi|300142918|gb|EFJ09614.1| hypothetical protein SELMODRAFT_41331 [Selaginella moellendorffii]
Length = 653
Score = 74.3 bits (181), Expect = 3e-11, Method: Composition-based stats.
Identities = 36/85 (42%), Positives = 55/85 (64%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R+ + SG +VP P+R F +L G +S L+ + + GY+ PTPIQ QA+P++LS
Sbjct: 165 YRQSIGVRTSGFDVPRPVRQFKEL----GLDSLLMGAITKQGYENPTPIQCQALPIVLSG 220
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ PM++ +
Sbjct: 221 RDIIGIAKTGSGKTAAFVLPMIVHI 245
>gi|281342094|gb|EFB17678.1| hypothetical protein PANDA_018093 [Ailuropoda melanoleuca]
Length = 613
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 149 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 204
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 205 TILSGRDMIGIAFTGSGKTLVFTLPVIM 232
>gi|218190067|gb|EEC72494.1| hypothetical protein OsI_05864 [Oryza sativa Indica Group]
Length = 513
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K++I V G +VP P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 164 LRRKWHILVDGDDVPPPARDFRDLR----LPEPMLRKLREKGIVQPTPIQVQGLPVVLSG 219
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIM 242
>gi|73971268|ref|XP_531911.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Canis lupus
familiaris]
gi|194219918|ref|XP_001918233.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Equus
caballus]
gi|426229554|ref|XP_004008855.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Ovis aries]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|62089534|gb|AAH92240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Mus musculus]
Length = 1027
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|402873575|ref|XP_003900647.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Papio anubis]
gi|355691902|gb|EHH27087.1| hypothetical protein EGK_17201 [Macaca mulatta]
gi|387542592|gb|AFJ71923.1| putative ATP-dependent RNA helicase DDX41 [Macaca mulatta]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|326432491|gb|EGD78061.1| hypothetical protein PTSG_08940 [Salpingoeca sp. ATCC 50818]
Length = 478
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RK++ I V G +VP P+ F +LS + +L NL ++ +++PTPIQ QAIP +L
Sbjct: 134 VRKQHQIQVKGDDVPPPVVAFQQLSD-YDVPKVVLSNLCKM-HEKPTPIQMQAIPAMLKK 191
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ APTGSGKT AF P+L L
Sbjct: 192 RDVVGIAPTGSGKTCAFSFPLLANL 216
>gi|301754307|ref|XP_002912967.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Ailuropoda melanoleuca]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|62896755|dbj|BAD96318.1| DEAD-box protein abstrakt variant [Homo sapiens]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|5270|emb|CAA36873.1| p68 protein [Schizosaccharomyces pombe]
Length = 550
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RK+ I V G NVP P+ TF G +Y+L+ + +LG++ PTPIQ+QA P+ +S
Sbjct: 104 YRKEKEIVVHGLNVPKPVTTF----EEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSG 159
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
R+ + TGSGKTL++ P ++ + L P D
Sbjct: 160 RDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGD 194
>gi|354471937|ref|XP_003498197.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Cricetulus
griseus]
Length = 638
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN ER RK+Y+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 169 LNMSEERHERVRKRYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQ 224
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 225 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 257
>gi|19113315|ref|NP_596523.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe 972h-]
gi|10720389|sp|P24782.2|DBP2_SCHPO RecName: Full=ATP-dependent RNA helicase dbp2; AltName:
Full=p68-like protein
gi|173419|gb|AAA35319.1| p68 RNA helicase [Schizosaccharomyces pombe]
gi|3810840|emb|CAA21801.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces pombe]
Length = 550
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 57/95 (60%), Gaps = 6/95 (6%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RK+ I V G NVP P+ TF G +Y+L+ + +LG++ PTPIQ+QA P+ +S
Sbjct: 104 YRKEKEIVVHGLNVPKPVTTF----EEAGFPNYVLKEVKQLGFEAPTPIQQQAWPMAMSG 159
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
R+ + TGSGKTL++ P ++ + L P D
Sbjct: 160 RDMVGISATGSGKTLSYCLPAIVHINAQPLLSPGD 194
>gi|21071032|ref|NP_057306.2| probable ATP-dependent RNA helicase DDX41 [Homo sapiens]
gi|55625482|ref|XP_518135.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 3 [Pan
troglodytes]
gi|397470614|ref|XP_003806913.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Pan paniscus]
gi|426351200|ref|XP_004043145.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Gorilla
gorilla gorilla]
gi|20532370|sp|Q9UJV9.2|DDX41_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41; AltName: Full=DEAD box protein
abstrakt homolog
gi|15930065|gb|AAH15476.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Homo sapiens]
gi|119605387|gb|EAW84981.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_d [Homo
sapiens]
gi|189067937|dbj|BAG37875.1| unnamed protein product [Homo sapiens]
gi|306921323|dbj|BAJ17741.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|325463517|gb|ADZ15529.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [synthetic construct]
gi|410219864|gb|JAA07151.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410264084|gb|JAA20008.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
gi|410289890|gb|JAA23545.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Pan troglodytes]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|410949088|ref|XP_003981256.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Felis catus]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|410948190|ref|XP_003980824.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Felis catus]
Length = 1030
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 351 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 406
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 407 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 439
>gi|355750194|gb|EHH54532.1| hypothetical protein EGM_15393, partial [Macaca fascicularis]
Length = 1029
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 348 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 403
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 404 SGRDLIGIAKTGSGKTIAFLLPM 426
>gi|344264944|ref|XP_003404549.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Loxodonta
africana]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|343961729|dbj|BAK62454.1| probable ATP-dependent RNA helicase DDX41 [Pan troglodytes]
Length = 622
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|332234495|ref|XP_003266442.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Nomascus
leucogenys]
Length = 1031
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|386781262|ref|NP_001248109.1| probable ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|380818496|gb|AFE81121.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|383423315|gb|AFH34871.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
gi|384950636|gb|AFI38923.1| putative ATP-dependent RNA helicase DDX46 [Macaca mulatta]
Length = 1032
Score = 74.3 bits (181), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|426229383|ref|XP_004008770.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Ovis aries]
Length = 622
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|75061689|sp|Q5R6D8.1|DDX46_PONAB RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46
gi|55731939|emb|CAH92678.1| hypothetical protein [Pongo abelii]
Length = 1032
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|109079956|ref|XP_001092587.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 isoform 3
[Macaca mulatta]
Length = 622
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|23336902|tpg|DAA00076.1| TPA_exp: Prp5-like DEAD-box protein [Homo sapiens]
gi|410212896|gb|JAA03667.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212898|gb|JAA03668.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410212900|gb|JAA03669.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256700|gb|JAA16317.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410256702|gb|JAA16318.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410300506|gb|JAA28853.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
gi|410350251|gb|JAA41729.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Pan troglodytes]
Length = 1032
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|30584005|gb|AAP36251.1| Homo sapiens DEAD-box protein abstrakt [synthetic construct]
gi|61369941|gb|AAX43416.1| DEAD box polypeptide 41 [synthetic construct]
gi|61369946|gb|AAX43417.1| DEAD box polypeptide 41 [synthetic construct]
Length = 623
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|395815579|ref|XP_003781303.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Otolemur garnettii]
Length = 1031
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPM 430
>gi|390459218|ref|XP_002744211.2| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Callithrix
jacchus]
Length = 1031
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|348575055|ref|XP_003473305.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 1
[Cavia porcellus]
Length = 1031
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|242035801|ref|XP_002465295.1| hypothetical protein SORBIDRAFT_01g035760 [Sorghum bicolor]
gi|241919149|gb|EER92293.1| hypothetical protein SORBIDRAFT_01g035760 [Sorghum bicolor]
Length = 618
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K++I V G +VP P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 155 LRRKWHIIVDGDDVPPPARDFRDLR----LPEPMLRKLRERGIVQPTPIQVQGLPVVLSG 210
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 211 RDMIGIAFTGSGKTLVFVLPLIM 233
>gi|119582644|gb|EAW62240.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_c [Homo
sapiens]
Length = 1032
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|41327773|ref|NP_055644.2| probable ATP-dependent RNA helicase DDX46 [Homo sapiens]
gi|332821955|ref|XP_517939.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan
troglodytes]
gi|397518269|ref|XP_003829316.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Pan paniscus]
gi|116241326|sp|Q7L014.2|DDX46_HUMAN RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=PRP5 homolog
gi|15126766|gb|AAH12304.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Homo sapiens]
gi|119582645|gb|EAW62241.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_d [Homo
sapiens]
Length = 1031
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|20806137|ref|NP_620798.1| probable ATP-dependent RNA helicase DDX46 [Rattus norvegicus]
gi|81890303|sp|Q62780.1|DDX46_RAT RecName: Full=Probable ATP-dependent RNA helicase DDX46; AltName:
Full=DEAD box protein 46; AltName: Full=Helicase of
117.4 kDa
gi|897915|gb|AAC52210.1| RNA helicase [Rattus norvegicus]
gi|78174325|gb|AAI07591.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 1032
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|448522708|ref|XP_003868758.1| Dbp10 protein [Candida orthopsilosis Co 90-125]
gi|380353098|emb|CCG25854.1| Dbp10 protein [Candida orthopsilosis]
Length = 912
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 52/75 (69%)
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
AN P+ + + FG +LL N+++ GYK+PTPIQR++IP+++++R+ A TGS
Sbjct: 83 ANNPTAKKAKAGSFASFGFSKFLLSNISKKGYKQPTPIQRKSIPLIINNRDVVGMARTGS 142
Query: 185 GKTLAFLCPMLMKLR 199
GKT AF+ P++ KL+
Sbjct: 143 GKTAAFVLPLIEKLK 157
>gi|58429986|gb|AAW78361.1| vasa RNA helicase [Tribolium castaneum]
Length = 580
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/79 (43%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G + P P+ +F G +LL N+ + GY +PT IQ+ AIPV+LS R+ +C
Sbjct: 146 VKVTGNDAPPPITSF----ETSGLRPHLLENVKKSGYTKPTAIQKYAIPVILSGRDLMSC 201
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ P++ L
Sbjct: 202 AQTGSGKTAAFMLPIIHNL 220
>gi|348575057|ref|XP_003473306.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Cavia porcellus]
Length = 1032
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPM 430
>gi|46124943|ref|XP_387025.1| hypothetical protein FG06849.1 [Gibberella zeae PH-1]
gi|91207408|sp|Q4I7F9.1|PRP28_GIBZE RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
Length = 721
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 42/116 (36%), Positives = 67/116 (57%), Gaps = 8/116 (6%)
Query: 85 AVDKEKEKVED---GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSR 140
A DK +++ + G ++K L+ ERD +F++ + I G +P+P+R++
Sbjct: 237 ARDKARQRADRRGLGKHWSEKSLDDMRERDWRIFKEDFGIATKGGMIPNPMRSW----QE 292
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
LL + ++GYK+P+PIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 293 SNLPQRLLNIVDDVGYKDPSPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 348
>gi|39104531|dbj|BAC98030.2| mKIAA0801 protein [Mus musculus]
Length = 1044
Score = 73.9 bits (180), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 369 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 424
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 425 SGRDLIGIAKTGSGKTIAFLLPM 447
>gi|256088555|ref|XP_002580396.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1544
Score = 73.9 bits (180), Expect = 3e-11, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDK-EKEKVEDGPSKAK 101
E E T E A+ KK K + I +E F K+ VP + K KE V
Sbjct: 777 EEEDTTIEDALAQLQKKDKLQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDV-------- 828
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
K +E NI V G P PLR +V+ G S LL L + +PTP
Sbjct: 829 KAYRASLE---------NIRVRGRECPKPLRNWVQA----GISSRLLACLKRNNFDKPTP 875
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IQ QA+PV++S R+ A TGSGKTLAFL P++ L
Sbjct: 876 IQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHL 912
>gi|452837778|gb|EME39720.1| hypothetical protein DOTSEDRAFT_180424 [Dothistroma septosporum
NZE10]
Length = 641
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/123 (33%), Positives = 71/123 (57%), Gaps = 11/123 (8%)
Query: 86 VDKEKEKVEDGPSK------AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLS 138
++ E+++ E+G ++K+L ERD +F++ +NI G ++P+P+R++
Sbjct: 153 LEAERKRREEGGRTGVEKHWSEKKLENMRERDWRIFKEDFNIATKGGSIPNPMRSW---- 208
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +L + ++GY EP+ +QR AIP+ L R+ A TGSGKT AFL P+L+ +
Sbjct: 209 GESGLPKRILDIVGQVGYTEPSAVQRAAIPIALQSRDLIGVAVTGSGKTAAFLLPLLVYI 268
Query: 199 RVL 201
L
Sbjct: 269 SEL 271
>gi|344240362|gb|EGV96465.1| putative ATP-dependent RNA helicase DDX46 [Cricetulus griseus]
Length = 1172
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 493 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 548
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 549 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 581
>gi|332263067|ref|XP_003280577.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Nomascus
leucogenys]
Length = 578
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|158257008|dbj|BAF84477.1| unnamed protein product [Homo sapiens]
Length = 1032
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|426350064|ref|XP_004042602.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like, partial
[Gorilla gorilla gorilla]
Length = 882
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 203 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 258
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 259 SGRDLIGIAKTGSGKTIAFLLPM 281
>gi|395817878|ref|XP_003804109.1| PREDICTED: LOW QUALITY PROTEIN: probable ATP-dependent RNA helicase
DDX46 [Otolemur garnettii]
Length = 941
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 314 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 369
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 370 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 402
>gi|396478747|ref|XP_003840607.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Leptosphaeria maculans JN3]
gi|312217179|emb|CBX97128.1| similar to pre-mRNA-splicing ATP-dependent RNA helicase prp28
[Leptosphaeria maculans JN3]
Length = 815
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 40/103 (38%), Positives = 62/103 (60%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+L ERD +F++ +NI G +P+P+R + S G L+R + ++GY E
Sbjct: 361 SEKKLEHMRERDWRIFKEDFNIATKGGAIPNPMRNW----SESGLPDKLMRIVEQVGYTE 416
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
P+ IQR AIP+ L R+ A TGSGKT AF+ P+L+ + L
Sbjct: 417 PSAIQRAAIPIALQCRDLIGVAVTGSGKTAAFILPLLVYISQL 459
>gi|255942831|ref|XP_002562184.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586917|emb|CAP94570.1| Pc18g03460 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 790
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/103 (39%), Positives = 63/103 (61%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K L+ ERD +F++ +NI G +VP+P+R++ + S LL + +GYK+
Sbjct: 324 SEKRLDLMRERDWRIFKEDFNIATKGGSVPNPMRSWEESS----LPKRLLELVERVGYKD 379
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PT IQR AIP+ + R+ A TGSGKT AFL P+L+ + L
Sbjct: 380 PTAIQRAAIPIAMQSRDLIGVAVTGSGKTAAFLLPLLVYISAL 422
>gi|218198500|gb|EEC80927.1| hypothetical protein OsI_23606 [Oryza sativa Indica Group]
Length = 203
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 52/84 (61%), Gaps = 6/84 (7%)
Query: 117 KYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
KY+I VSGA+VP P F G +LRN+A GY+ PTP+QR ++P+ L+ R
Sbjct: 67 KYDIPVEVSGADVPPPADGF----EAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ ACA TGSGKT AF P++ L
Sbjct: 123 DLMACAQTGSGKTAAFCLPVVSGL 146
>gi|256088559|ref|XP_002580398.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1476
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDK-EKEKVEDGPSKAK 101
E E T E A+ KK K + I +E F K+ VP + K KE V
Sbjct: 709 EEEDTTIEDALAQLQKKDKLQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDV-------- 760
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
K +E NI V G P PLR +V+ G S LL L + +PTP
Sbjct: 761 KAYRASLE---------NIRVRGRECPKPLRNWVQA----GISSRLLACLKRNNFDKPTP 807
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IQ QA+PV++S R+ A TGSGKTLAFL P++ L
Sbjct: 808 IQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHL 844
>gi|256088557|ref|XP_002580397.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
Length = 1500
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 58/157 (36%), Positives = 74/157 (47%), Gaps = 22/157 (14%)
Query: 43 EGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDK-EKEKVEDGPSKAK 101
E E T E A+ KK K + I +E F K+ VP + K KE V
Sbjct: 733 EEEDTTIEDALAQLQKKDKLQPIDHSKIEYFPFRKNFYVEVPELAKMSKEDV-------- 784
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
K +E NI V G P PLR +V+ G S LL L + +PTP
Sbjct: 785 KAYRASLE---------NIRVRGRECPKPLRNWVQA----GISSRLLACLKRNNFDKPTP 831
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
IQ QA+PV++S R+ A TGSGKTLAFL P++ L
Sbjct: 832 IQCQALPVIMSGRDMIGIAKTGSGKTLAFLVPLMRHL 868
>gi|255548421|ref|XP_002515267.1| hypothetical protein RCOM_1346600 [Ricinus communis]
gi|223545747|gb|EEF47251.1| hypothetical protein RCOM_1346600 [Ricinus communis]
Length = 791
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/99 (41%), Positives = 62/99 (62%), Gaps = 5/99 (5%)
Query: 101 KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
K ++ E+D A +RK I VSG +VP P+++F S F + L+ + + GY++P
Sbjct: 192 KPSISGMSEQDVAEYRKSLAIRVSGFDVPRPIKSFEDCS--FSMQ--LMNAIVKQGYEKP 247
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
T IQ QA+PV+LS R+ A TGSGKT AF+ PM++ +
Sbjct: 248 TSIQCQALPVVLSGRDIIGIAKTGSGKTAAFVLPMIVHI 286
>gi|242093508|ref|XP_002437244.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
gi|241915467|gb|EER88611.1| hypothetical protein SORBIDRAFT_10g023440 [Sorghum bicolor]
Length = 567
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 51/86 (59%), Gaps = 6/86 (6%)
Query: 117 KYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
KY+I VSG P+P F G +LRN+A GY PTP+QR A+P++++ R
Sbjct: 39 KYDIPVEVSGEGAPAPADGF----EAAGLAEAVLRNVARCGYDNPTPVQRYAMPIVMAGR 94
Query: 175 ECFACAPTGSGKTLAFLCPMLMKLRV 200
+ ACA TGSGKT AF P++ L V
Sbjct: 95 DLMACAQTGSGKTAAFCLPVVSGLVV 120
>gi|291276231|gb|ADD91316.1| vasa [Seriola quinqueradiata]
Length = 650
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 203 VDVSGTNPPQAIMTFAEAAL---CES-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 258
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 259 AQTGSGKTAAFLLPILQQLMADGVAASQFSEL 290
>gi|336266888|ref|XP_003348211.1| hypothetical protein SMAC_04056 [Sordaria macrospora k-hell]
Length = 648
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E D PSK +N F K +I V SG NVP P+ TF
Sbjct: 177 PRVERELFGTPDDPSKQHTGIN--------FEKYDDIPVEASGENVPEPVLTFTNPP--- 225
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+++L+ N+A Y PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L
Sbjct: 226 -LDNHLISNIALARYNVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPIL 278
>gi|357017323|gb|AET50690.1| hypothetical protein [Eimeria tenella]
Length = 639
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/55 (61%), Positives = 40/55 (72%)
Query: 146 YLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
+LL L LGYKEPTPIQ QA+P+LL R A APTGSGKTLAFL P++ L+
Sbjct: 137 WLLSRLEALGYKEPTPIQMQALPLLLQGRHLLASAPTGSGKTLAFLLPVITCLKA 191
>gi|336465424|gb|EGO53664.1| hypothetical protein NEUTE1DRAFT_133987 [Neurospora tetrasperma
FGSC 2508]
gi|350295288|gb|EGZ76265.1| Pre-mRNA-splicing ATP-dependent RNA helicase prp-28 [Neurospora
tetrasperma FGSC 2509]
Length = 728
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 88 KEKEKVED-GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
KE E+ ++ G ++K+L ERD +F++ + I G +P+P+R++ ES
Sbjct: 247 KEMEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWE--------ES 298
Query: 146 YLLRNLAEL----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L R L ++ GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 299 TLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 358
>gi|395233486|ref|ZP_10411726.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. Ag1]
gi|394732213|gb|EJF31920.1| ATP-dependent RNA helicase RhlE [Enterobacter sp. Ag1]
Length = 465
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 41/58 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR + E GY+EPTPIQRQAIPV+LS R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLNADILRAVEEQGYREPTPIQRQAIPVVLSGRDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|389584149|dbj|GAB66882.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium cynomolgi
strain B]
Length = 1104
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+ + +RD +FR+ I++ G VP+P+R + S LL+ + + Y++
Sbjct: 643 SEKKREEMTDRDWRIFREDNEIYIKGGIVPAPIRRW----EESNLSSDLLKAIKKAKYEK 698
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 699 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQL 741
>gi|357495795|ref|XP_003618186.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355493201|gb|AES74404.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 619
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/102 (39%), Positives = 59/102 (57%), Gaps = 5/102 (4%)
Query: 98 SKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
S+ E + DA +R+++ I V+G NVP P+ +F SS F E +LR + G+
Sbjct: 131 SQVPLETGPALSPDA-YRRRHEITVTGDNVPPPVTSFA--SSGFPSE--ILREVQNAGFS 185
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
PTPIQ Q+ P+ L ++ A A TGSGKTL +L P + L+
Sbjct: 186 APTPIQAQSWPIALQSKDIVAIAKTGSGKTLGYLLPAFIHLK 227
>gi|149241448|ref|XP_001526316.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
gi|152013474|sp|A5DZT7.1|DBP10_LODEL RecName: Full=ATP-dependent RNA helicase DBP10
gi|146450439|gb|EDK44695.1| hypothetical protein LELG_02874 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 948
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 46/60 (76%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
FG +LL N+A+ GYK+PTPIQR++IP+++ +R+ A TGSGKT AF+ P++ KL++
Sbjct: 126 FGFSKFLLANIAKKGYKQPTPIQRRSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLKL 185
>gi|392572621|gb|EIW65766.1| hypothetical protein TREMEDRAFT_46029 [Tremella mesenterica DSM
1558]
Length = 558
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 60/110 (54%), Gaps = 13/110 (11%)
Query: 99 KAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+++KE+N FR + + + G NVP P++TF G Y++ + +G+
Sbjct: 103 RSEKEIND-------FRAEKTMKIQGTNVPRPIKTF----DEAGFPDYIMTEIHAMGFAA 151
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
PTPIQ QA P+ LS R+ A A TGSGKT++F P ++ + L P D
Sbjct: 152 PTPIQCQAWPMALSGRDVVAIAETGSGKTISFALPAMVHINAQPLLAPGD 201
>gi|40788370|dbj|BAA34521.2| KIAA0801 protein [Homo sapiens]
Length = 1058
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 378 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 433
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 434 SGRDLIGIAKTGSGKTIAFLLPM 456
>gi|39104462|dbj|BAD04052.1| vasa homologue [Leucopsarion petersii]
Length = 645
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + +F + + CES L +N+++ GY +PTP+Q+ +P++ + R+ AC
Sbjct: 198 VEVSGSNPPKAIMSFEEAAL---CES-LKKNVSKSGYVKPTPVQKHGVPIISAGRDLMAC 253
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L L + F EL
Sbjct: 254 AQTGSGKTAAFLLPILQHLMADGVAASQFSEL 285
>gi|119582642|gb|EAW62238.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
gi|119582646|gb|EAW62242.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46, isoform CRA_a [Homo
sapiens]
Length = 883
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|84995424|ref|XP_952434.1| RNA helicase [Theileria annulata strain Ankara]
gi|65302595|emb|CAI74702.1| RNA helicase, putative [Theileria annulata]
Length = 628
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/85 (36%), Positives = 53/85 (62%), Gaps = 2/85 (2%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
F+K++NI G VP P+ +F+ +S +L + ++G+ EPTP+Q Q IP +L
Sbjct: 118 FKKRFNIETFGTRVPKPISSFIHISKSI--PPTILNRIEKMGFYEPTPVQSQVIPCILQG 175
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R + TGSGKT+++L P+++K+
Sbjct: 176 RNTIILSETGSGKTISYLIPIVVKV 200
>gi|143455555|sp|Q0E3X4.2|RH35A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 35A
gi|51535964|dbj|BAD38045.1| putative DEAD-box protein abstrakt [Oryza sativa Japonica Group]
Length = 627
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K++I V G +VP P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 164 LRRKWHILVDGDDVPPPARDFRDLR----LPEPMLRKLREKGIVQPTPIQVQGLPVVLSG 219
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 220 RDMIGIAFTGSGKTLVFVLPLIM 242
>gi|444517226|gb|ELV11421.1| putative ATP-dependent RNA helicase DDX46 [Tupaia chinensis]
Length = 1078
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 399 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 454
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 455 SGRDLIGIAKTGSGKTIAFLLPM 477
>gi|378729404|gb|EHY55863.1| hypothetical protein HMPREF1120_03978 [Exophiala dermatitidis
NIH/UT8656]
Length = 1216
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NI V G NVP P++ + ++ G +L + LGY+ PT IQ QAIP ++S R+
Sbjct: 564 NIKVRGVNVPKPVQKW----AQCGLGVQVLEVIQRLGYEAPTSIQAQAIPAIMSGRDVIG 619
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM ++
Sbjct: 620 VAKTGSGKTIAFLLPMFRHIK 640
>gi|302835930|ref|XP_002949526.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
gi|300265353|gb|EFJ49545.1| hypothetical protein VOLCADRAFT_59325 [Volvox carteri f.
nagariensis]
Length = 722
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 35/91 (38%), Positives = 57/91 (62%), Gaps = 4/91 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER + ++ I V G ++P+P+R + ++ G S LL L + G+ P PIQ QA+P
Sbjct: 50 ERAELRKEMDGIKVRGKDIPAPVRAW----TQAGLSSRLLEVLKKRGFDRPLPIQAQALP 105
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+++S R+C A TGSGKT+AF+ PM+ ++
Sbjct: 106 IIMSGRDCIGIAKTGSGKTMAFVLPMMRHIK 136
>gi|302840989|ref|XP_002952040.1| hypothetical protein VOLCADRAFT_81727 [Volvox carteri f.
nagariensis]
gi|300262626|gb|EFJ46831.1| hypothetical protein VOLCADRAFT_81727 [Volvox carteri f.
nagariensis]
Length = 622
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%), Gaps = 4/86 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++++I V G +VP PL+TF + G +L + G+K PTPIQ QA P+ LS
Sbjct: 104 YRRQHDISVQGDHVPDPLQTFESV----GFPPDILDEIRRAGFKYPTPIQAQAWPIALSG 159
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKT FL P ++ ++
Sbjct: 160 RDLVAIAKTGSGKTCGFLLPGMLHIQ 185
>gi|294893710|ref|XP_002774608.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
gi|239880001|gb|EER06424.1| RNA helicase, putative [Perkinsus marinus ATCC 50983]
Length = 520
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 53/86 (61%), Gaps = 5/86 (5%)
Query: 114 FRKKYNIH-VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
R++++I V+G NVP P+ TF + G Y+L LA+ G+ PTPIQ Q PV +S
Sbjct: 92 IRRQHDITIVAGRNVPRPVVTF----EQAGFPDYILHELAQAGFVAPTPIQIQGWPVAMS 147
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLAFL P ++ +
Sbjct: 148 GRDMVGIAETGSGKTLAFLLPAIVHI 173
>gi|395815581|ref|XP_003781304.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like isoform 2
[Otolemur garnettii]
Length = 872
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 193 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 248
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 249 SGRDLIGIAKTGSGKTIAFLLPM 271
>gi|327278500|ref|XP_003224000.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Anolis
carolinensis]
Length = 1030
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+V+ G +L +L + GY++PTPIQ QAIP +++ R+
Sbjct: 358 ITVKGKGCPKPIKTWVQC----GISMKILNSLKKHGYEKPTPIQAQAIPAIMNGRDLIGI 413
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 414 AKTGSGKTIAFLLPM 428
>gi|50927797|gb|AAH79483.1| Ddx42 protein [Danio rerio]
Length = 402
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K N+ VSGA P P +F + FG + L+ + + Y +PTPIQ Q +P+ LS
Sbjct: 237 LRRKLNLKVSGAAPPKPATSF----AHFGFDEQLMHQIRKSEYTQPTPIQCQGVPIALSG 292
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ P+L+ +
Sbjct: 293 RDAIGIAKTGSGKTAAFIWPILVHI 317
>gi|6118555|gb|AAF04150.1|AF195417_1 DEAD-box protein abstrakt [Homo sapiens]
Length = 621
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 157 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 212
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 213 TILSGRDMIGIAFTGSGKTLVFTLPVIM 240
>gi|294875381|ref|XP_002767294.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
gi|239868857|gb|EER00012.1| RNA helicase-1, putative [Perkinsus marinus ATCC 50983]
Length = 1227
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/184 (34%), Positives = 89/184 (48%), Gaps = 30/184 (16%)
Query: 41 FVEGEKTDPEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLV-----PAVDKEKEKVED 95
VEGE + A+V + I + + + F+ +KQ V P VD K +E
Sbjct: 401 VVEGESEKNKTAIVV------KPEIKEDDISRMSYFELAKQFVSKKELPPVDHSK--IEY 452
Query: 96 GPSKAKKELNKQI-------ERDAVFRKKYN--IHVSGANVPSPLRTFVKLSSRFGCESY 146
P KK L KQ+ E + ++ N I V G + P P+++F + G +
Sbjct: 453 YP--IKKNLYKQVREISNMPEHEVAQLRQSNGDIRVRGKHCPRPIKSF----AMAGLDVR 506
Query: 147 LLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFD 206
+LR L G P PIQ QAIP LL R+ A APTGSGKTLA+L PM+ V+ P
Sbjct: 507 ILRMLDRKGITTPFPIQMQAIPALLCGRDVIAIAPTGSGKTLAYLLPMVR--HVMAQPPL 564
Query: 207 YFCE 210
+F E
Sbjct: 565 FFNE 568
>gi|119605383|gb|EAW84977.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_a [Homo
sapiens]
gi|119605386|gb|EAW84980.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_a [Homo
sapiens]
gi|193787208|dbj|BAG52414.1| unnamed protein product [Homo sapiens]
Length = 496
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 32 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 87
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 88 TILSGRDMIGIAFTGSGKTLVFTLPVIM 115
>gi|82539888|ref|XP_724299.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii 17XNL]
gi|23478899|gb|EAA15864.1| U5 snRNP 100 kD protein [Plasmodium yoelii yoelii]
Length = 967
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 5/108 (4%)
Query: 95 DGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
D ++K+ +RD +FR+ I++ G VP P+R + S LL+ + +
Sbjct: 505 DNKHWSEKKREDMTDRDWRIFREDNEIYIKGGVVPPPIRKW----EESNLSSDLLKAIKK 560
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
Y++PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 561 AKYEKPTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQL 608
>gi|359786465|ref|ZP_09289600.1| DEAD/DEAH box helicase [Halomonas sp. GFAJ-1]
gi|359296315|gb|EHK60568.1| DEAD/DEAH box helicase [Halomonas sp. GFAJ-1]
Length = 443
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 43/59 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
S+ G S L++ + ELGYK PTPIQ QAIPV+LS ++ A A TG+GKT AF+ P+L K
Sbjct: 48 SKLGLSSPLVQAITELGYKAPTPIQEQAIPVILSGKDLIATAQTGTGKTAAFVLPLLEK 106
>gi|260945072|ref|XP_002616834.1| hypothetical protein CLUG_04075 [Clavispora lusitaniae ATCC 42720]
gi|238850483|gb|EEQ39947.1| hypothetical protein CLUG_04075 [Clavispora lusitaniae ATCC 42720]
Length = 559
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 46/124 (37%), Positives = 65/124 (52%), Gaps = 20/124 (16%)
Query: 91 EKVEDGPSKAK-------KELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFG 142
E V++G S K K L RD +F+ +NI G N+ +PLR++ +
Sbjct: 95 ETVQNGMSDQKNPAHWSEKSLEHMTPRDWRIFKDDFNISAKGNNIHNPLRSWDE------ 148
Query: 143 CESYLLRNLAE-----LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
E L ++ E L Y EPTP+QR AIPV L R+ A TGSGKTLAFL P++
Sbjct: 149 -EPQLPTSIVEVITQKLKYTEPTPVQRAAIPVALRHRDVVGIAETGSGKTLAFLLPLITY 207
Query: 198 LRVL 201
++ +
Sbjct: 208 IQSI 211
>gi|125580822|gb|EAZ21753.1| hypothetical protein OsJ_05388 [Oryza sativa Japonica Group]
Length = 516
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/83 (45%), Positives = 50/83 (60%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K++I V G +VP P R F L +LR L E G +PTPIQ Q +PV+LS
Sbjct: 53 LRRKWHILVDGDDVPPPARDFRDLR----LPEPMLRKLREKGIVQPTPIQVQGLPVVLSG 108
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 109 RDMIGIAFTGSGKTLVFVLPLIM 131
>gi|85113073|ref|XP_964459.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
gi|74654326|sp|Q7SEL0.1|PRP28_NEUCR RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase prp-28
gi|28926242|gb|EAA35223.1| hypothetical protein NCU02803 [Neurospora crassa OR74A]
Length = 728
Score = 73.9 bits (180), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 88 KEKEKVED-GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
KE E+ ++ G ++K+L ERD +F++ + I G +P+P+R++ ES
Sbjct: 247 KEMEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWE--------ES 298
Query: 146 YLLRNLAEL----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L R L ++ GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 299 TLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 358
>gi|34364998|emb|CAE46035.1| hypothetical protein [Homo sapiens]
Length = 496
Score = 73.9 bits (180), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 32 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 87
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 88 TILSGRDMIGIAFTGSGKTLVFTLPVIM 115
>gi|355683297|gb|AER97080.1| DEAD box polypeptide 46 [Mustela putorius furo]
Length = 842
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 163 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 218
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 219 SGRDLIGIAKTGSGKTIAFLLPM 241
>gi|336274640|ref|XP_003352074.1| hypothetical protein SMAC_00622 [Sordaria macrospora k-hell]
gi|380096359|emb|CCC06407.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 730
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 47/120 (39%), Positives = 69/120 (57%), Gaps = 14/120 (11%)
Query: 88 KEKEKVED-GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCES 145
KE E+ ++ G ++K+L ERD +F++ + I G +P+P+R++ ES
Sbjct: 249 KETEQRKNLGKHWSEKKLEDMKERDWRIFKENFGIATKGGAIPNPMRSWD--------ES 300
Query: 146 YLLRNLAEL----GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
L R L ++ GY EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ + L
Sbjct: 301 TLPRRLLDIVKNVGYDEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLVYISEL 360
>gi|224067501|ref|XP_002193843.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Taeniopygia
guttata]
Length = 617
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P P+++F ++ +F + +LR L + G ++PTPIQ Q IP
Sbjct: 154 RHDRVRKKYHILVEGEGIPPPIKSFKEM--KF--PAAILRGLKKKGIQQPTPIQIQGIPT 209
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 210 ILSGRDMIGIAFTGSGKTLVFTLPVIM 236
>gi|47226775|emb|CAG06617.1| unnamed protein product [Tetraodon nigroviridis]
Length = 558
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + CES L +++++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 157 VDVSGFNPPRAIVTFDEAEL---CES-LRKSISKSGYTKPTPVQKHGIPIIFAGRDLMAC 212
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L KL + F EL
Sbjct: 213 AQTGSGKTAAFLLPILQKLIADGVAASSFSEL 244
>gi|350426308|ref|XP_003494399.1| PREDICTED: ATP-dependent RNA helicase DDX42-like [Bombus impatiens]
Length = 774
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+K I VSG + P+P+ +F FG + L++ + + Y +PTPIQ QA+P LS
Sbjct: 237 LKKTLGIKVSGPSPPNPVTSF----GHFGFDDALIKAIRKNEYTQPTPIQAQAVPAALSG 292
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AF+ PML+ +
Sbjct: 293 RDIIGIAKTGSGKTAAFIWPMLVHI 317
>gi|345327882|ref|XP_001510706.2| PREDICTED: probable ATP-dependent RNA helicase DDX46, partial
[Ornithorhynchus anatinus]
Length = 973
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++S R+
Sbjct: 302 ITVKGKGCPKPIKSWVQC----GISMKILNSLRKHGYEKPTPIQTQAIPAIMSGRDLIGI 357
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 358 AKTGSGKTIAFLLPM 372
>gi|157820683|ref|NP_001101516.1| probable ATP-dependent RNA helicase DDX41 [Rattus norvegicus]
gi|149039854|gb|EDL93970.1| rCG24134 [Rattus norvegicus]
gi|187469705|gb|AAI66825.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Rattus norvegicus]
Length = 622
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEMK----LPAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|1054723|emb|CAA31405.1| vasa [Drosophila melanogaster]
Length = 661
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 117 KYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
KYN + V+G++VP P++ F R ++ N+ + G+K PTPIQ+ +IPV+ S
Sbjct: 227 KYNNIPVKVTGSDVPQPIQHFTSADLR----DIIIDNVNKSGFKIPTPIQKCSIPVISSG 282
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L KL
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKL 307
>gi|301112795|ref|XP_002998168.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262112462|gb|EEY70514.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 823
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 59/101 (58%), Gaps = 3/101 (2%)
Query: 96 GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
G ++K L++ ERD +FR+ ++I + G P PLR + + Y + + +L
Sbjct: 320 GTHWSEKSLDEMKERDWRIFREDFDITLKGGRAPHPLRKWSEAGKMLPDAVY--KAIKDL 377
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
G++ P+PIQ QAIP+ L R+ A TGSGKT AF+ P++
Sbjct: 378 GFERPSPIQMQAIPIGLQKRDIIGIAETGSGKTAAFVIPII 418
>gi|302915827|ref|XP_003051724.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256732663|gb|EEU46011.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 714
Score = 73.6 bits (179), Expect = 4e-11, Method: Composition-based stats.
Identities = 41/102 (40%), Positives = 61/102 (59%), Gaps = 5/102 (4%)
Query: 96 GPSKAKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAEL 154
G +K L++ ERD +F++ + I G +P+P+R + + + LL + ++
Sbjct: 241 GKRWTEKSLDEMRERDWRIFKEDFGIATKGGMIPNPMRNWRESN----LPPRLLSVVDQV 296
Query: 155 GYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
GYKEPTPIQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 297 GYKEPTPIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 338
>gi|224064557|ref|XP_002301515.1| predicted protein [Populus trichocarpa]
gi|222843241|gb|EEE80788.1| predicted protein [Populus trichocarpa]
Length = 807
Score = 73.6 bits (179), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 59/96 (61%), Gaps = 5/96 (5%)
Query: 104 LNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPI 162
+++ E+D A + K I VSG VP P++TF G L+ +A+ GY++PTPI
Sbjct: 196 ISEMSEQDVAEYMKSLAIRVSGFEVPRPIKTF----EDCGFSPQLMNAIAKQGYEKPTPI 251
Query: 163 QRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
Q QA+P++LS + A TGSGKT AF+ PM++ +
Sbjct: 252 QCQALPIVLSGSDIIGMAKTGSGKTAAFVLPMIVHI 287
>gi|326928431|ref|XP_003210383.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like
[Meleagris gallopavo]
Length = 604
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P P+++F ++ +F + +LR L + G ++PTPIQ Q IP
Sbjct: 141 RHDRVRKKYHILVEGEGIPPPIKSFKEM--KF--PAAILRGLKKKGIQQPTPIQIQGIPT 196
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 197 ILSGRDMIGIAFTGSGKTLVFTLPVIM 223
>gi|344301065|gb|EGW31377.1| ATP-dependent RNA helicase DBP10 [Spathaspora passalidarum NRRL
Y-27907]
Length = 918
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 51/76 (67%)
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
AN P+ + + FG +LL N+A+ G+++PTPIQR+ IP+++ +R+ A TGS
Sbjct: 91 ANNPATKKAKAGSFASFGLSKFLLTNIAKKGFRQPTPIQRKTIPLVMENRDVVGMARTGS 150
Query: 185 GKTLAFLCPMLMKLRV 200
GKT AF+ P++ KL+V
Sbjct: 151 GKTAAFVLPLIEKLKV 166
>gi|301612896|ref|XP_002935944.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 1
[Xenopus (Silurana) tropicalis]
Length = 1049
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G N P P++++V+ G +L +L + Y++PTPIQ QAIP ++S R+
Sbjct: 359 ITVKGKNCPKPIKSWVQC----GISMKILNSLKKHAYEKPTPIQAQAIPAIMSGRDLIGI 414
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 415 AKTGSGKTIAFLLPM 429
>gi|221056985|ref|XP_002259630.1| snrnp protein [Plasmodium knowlesi strain H]
gi|193809702|emb|CAQ40404.1| snrnp protein, putative [Plasmodium knowlesi strain H]
Length = 1001
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 61/103 (59%), Gaps = 5/103 (4%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+ + +RD +FR+ I++ G VP+P+R + S LL+ + + Y++
Sbjct: 543 SEKKREEMTDRDWRIFREDNEIYIKGGIVPAPIRRW----EESNLSSDLLKAIKKAKYEK 598
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L
Sbjct: 599 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLSYVKQL 641
>gi|19309904|emb|CAC84069.1| vasa-like protein [Danio rerio]
Length = 715
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 264 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 319
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 320 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEM 351
>gi|326426645|gb|EGD72215.1| DEAD box ATP-dependent RNA helicase [Salpingoeca sp. ATCC 50818]
Length = 1054
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 48/77 (62%), Gaps = 4/77 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NI G + P P++T+ ++ G +L L L Y +PTPIQ QA+PV++S R+
Sbjct: 301 NIKTRGRDCPRPIKTW----NQSGLPRRVLDVLRALKYDDPTPIQAQALPVIMSGRDMLG 356
Query: 179 CAPTGSGKTLAFLCPML 195
A TGSGKTLAFL PML
Sbjct: 357 IAKTGSGKTLAFLLPML 373
>gi|393223045|gb|EJD08529.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 618
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/95 (41%), Positives = 56/95 (58%), Gaps = 10/95 (10%)
Query: 102 KELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTP 161
KE+N++I R++Y+I V G ++P P+ +F + LL+NL G PTP
Sbjct: 159 KEVNQRI------REQYHILVEGEDIPPPIPSFADMK----IPDVLLKNLKSKGIVSPTP 208
Query: 162 IQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
IQ Q +PV L+ R+ A TGSGKTLAF P++M
Sbjct: 209 IQTQGLPVALAGRDMIGIAFTGSGKTLAFCLPLIM 243
>gi|213406193|ref|XP_002173868.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces japonicus
yFS275]
gi|212001915|gb|EEB07575.1| ATP-dependent RNA helicase Dbp2 [Schizosaccharomyces japonicus
yFS275]
Length = 553
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 64/111 (57%), Gaps = 9/111 (8%)
Query: 101 KKELNKQIERDA---VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYK 157
K+ N +++ DA FRK+ + V G NVP P+ TF G +Y+L+ + LG++
Sbjct: 92 KEHENVRLKSDAEIEQFRKEKEMVVIGENVPRPISTF----EEAGFPNYVLKEVQALGFE 147
Query: 158 EPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
PTPIQ+QA P+ +S R+ + TGSGKTL++ P ++ + L P D
Sbjct: 148 SPTPIQQQAWPMAMSGRDMVGISATGSGKTLSYCLPAIVHINAQPLLAPGD 198
>gi|195385611|ref|XP_002051498.1| vas [Drosophila virilis]
gi|21361025|gb|AAM49782.1|AF513908_1 DEAD-box RNA helicase [Drosophila virilis]
gi|194147955|gb|EDW63653.1| vas [Drosophila virilis]
Length = 625
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 48/79 (60%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G NVP P++ F R +L N+ + GY PTPIQ+ +IPV+ R+ AC
Sbjct: 199 VKVTGENVPQPIKNFESARLR----GIVLDNVVKSGYVVPTPIQKVSIPVIAEGRDLMAC 254
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L +
Sbjct: 255 AQTGSGKTAAFLLPILNNI 273
>gi|195579332|ref|XP_002079516.1| GD23992 [Drosophila simulans]
gi|194191525|gb|EDX05101.1| GD23992 [Drosophila simulans]
Length = 547
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 68/120 (56%), Gaps = 8/120 (6%)
Query: 83 VPAVDKEKE-KVEDGPSKAKKEL-NKQIERDAVFRKKYNI--HVSGANVPSPLRTFVKLS 138
V V K++E + PS + E+ + I F K NI V+G +VP ++ F
Sbjct: 78 VEDVQKKREFYIPPAPSNDETEIFSSGIASGINFSKYDNIPVKVTGNDVPPGIKNFTSAD 137
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
R ++ N+ + GYK PTPIQ++AIPV+ + R+ ACA TGSGKT +FL P++ KL
Sbjct: 138 LR----GIIVENVKKSGYKVPTPIQKRAIPVITAGRDLMACAQTGSGKTASFLLPIISKL 193
>gi|356572801|ref|XP_003554554.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 24-like [Glycine
max]
Length = 768
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+RK I VSG +VP P++TF G S ++ + + GY++PT IQ QA+PV+LS
Sbjct: 208 YRKSLAIRVSGFDVPKPIKTF----EDCGFPSQIMNAIKKQGYEKPTSIQCQALPVVLSG 263
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT +F+ PM++ +
Sbjct: 264 RDIIGIAKTGSGKTASFVLPMIVHI 288
>gi|291241720|ref|XP_002740759.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Saccoglossus kowalevskii]
Length = 1091
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 56/98 (57%), Gaps = 6/98 (6%)
Query: 103 ELNKQIERDAV-FRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPT 160
E+ K E D + +R + N+ V G P P++ +V+ G +L L +L Y++PT
Sbjct: 393 EIAKMTEEDVISYRAELENVKVRGKGCPKPIKAWVQC----GVSKKVLDVLKKLKYEKPT 448
Query: 161 PIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PIQ QAIP ++S R A TGSGKTLAFL PM +
Sbjct: 449 PIQAQAIPAIMSGRNLIGIAKTGSGKTLAFLLPMFRHI 486
>gi|90075638|dbj|BAE87499.1| unnamed protein product [Macaca fascicularis]
Length = 457
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
L+ ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 153 LSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQ 208
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 209 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|449267073|gb|EMC78039.1| putative ATP-dependent RNA helicase DDX41, partial [Columba livia]
Length = 605
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P P+++F ++ +F + +LR L + G ++PTPIQ Q IP
Sbjct: 153 RHDRVRKKYHILVEGEGIPPPIKSFKEM--KF--PAAILRGLKKKGIQQPTPIQIQGIPT 208
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 209 ILSGRDMIGIAFTGSGKTLVFTLPVIM 235
>gi|432895747|ref|XP_004076142.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Oryzias
latipes]
Length = 1043
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 46/76 (60%), Gaps = 4/76 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I V G P P++T+V+ G +L L + GY +PTPIQ QAIP ++S R+
Sbjct: 354 GIMVKGKGCPKPIKTWVQC----GVSMKILSALKKQGYDKPTPIQAQAIPAIMSGRDLIG 409
Query: 179 CAPTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 410 IAKTGSGKTIAFLLPM 425
>gi|429843833|gb|AGA16734.1| Vasa protein [Kryptolebias marmoratus]
Length = 641
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + CES L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 189 VDVSGINPPQAIMTFDEAGL---CES-LRKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 244
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L L + F E+
Sbjct: 245 AQTGSGKTAAFLLPILQMLMADGVAASRFSEI 276
>gi|334311247|ref|XP_001381058.2| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Monodelphis
domestica]
Length = 617
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P PL++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 154 RHDRVRKKYHILVEGEGIPPPLKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIPT 209
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 210 ILSGRDMIGIAFTGSGKTLVFTLPVIM 236
>gi|226487070|emb|CAX75400.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487074|emb|CAX75402.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
gi|226487078|emb|CAX75404.1| putative ATP-dependent RNA helicase DDX5 [Schistosoma japonicum]
Length = 768
Score = 73.6 bits (179), Expect = 5e-11, Method: Composition-based stats.
Identities = 51/150 (34%), Positives = 82/150 (54%), Gaps = 12/150 (8%)
Query: 49 PEKAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQI 108
P + SF + KR + + +KS++ +P EK+ ++ P A + ++
Sbjct: 14 PVRGWSSFAQHSKRGKLEMDMDFSAPDWKSTE--LPKF--EKKFYQEHPLSASR---PEV 66
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E +A FRKKY + +SG +VP P+ +F +LS Y+L +A+ G++ PTPIQ Q P
Sbjct: 67 EVEA-FRKKYKMSLSGRDVPRPVLSFNELS----VPDYILSVIAKNGWQLPTPIQSQGWP 121
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+ LS R+ A TGSGKT FL P ++ +
Sbjct: 122 MALSGRDVVGIAQTGSGKTATFLLPAVIHI 151
>gi|219686271|dbj|BAH08688.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 4 [Pagrus major]
Length = 631
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + CES L + +++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 184 VDVSGTNPPQAIMTFDEAGL---CES-LRKTVSKSGYVKPTPVQKHGIPIISAGRDLMAC 239
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 240 AQTGSGKTAAFLLPILQQLMADGVAASSFSEL 271
>gi|149039843|gb|EDL93959.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Rattus norvegicus]
Length = 940
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 440
>gi|19482136|gb|AAL89410.1|AF461759_1 vasa-like protein [Danio rerio]
Length = 715
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 264 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 319
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 320 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEI 351
>gi|449458179|ref|XP_004146825.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
gi|449476660|ref|XP_004154799.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Cucumis
sativus]
Length = 505
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 53/85 (62%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G +VP P+++F + G Y+++ +A+ G+ EPTPIQ Q P+ L
Sbjct: 81 YRQRREITVEGRDVPKPVKSFRDV----GFPDYVMQEIAKAGFTEPTPIQSQGWPMALKG 136
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 137 RDLIGIAETGSGKTLAYLLPAIVHV 161
>gi|62638007|gb|AAX92639.1| Vasa protein [Monopterus albus]
Length = 450
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 57/93 (61%), Gaps = 4/93 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
+ VSG N P + TF + CE+ L RN+++ GY +PTP+Q+ IP++ + R+ A
Sbjct: 11 TVDVSGPNPPKAIMTFDEAEL---CET-LRRNVSKSGYVKPTPVQKHGIPIISAGRDLMA 66
Query: 179 CAPTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
CA TGSGKT +FL P+L +L V + F EL
Sbjct: 67 CAQTGSGKTASFLLPILQQLMVDGVAASCFSEL 99
>gi|18859541|ref|NP_571132.1| probable ATP-dependent RNA helicase DDX4 [Danio rerio]
gi|2463519|dbj|BAA22535.1| vas [Danio rerio]
Length = 716
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 265 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 320
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 321 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEI 352
>gi|301612898|ref|XP_002935945.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 isoform 2
[Xenopus (Silurana) tropicalis]
Length = 1024
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G N P P++++V+ G +L +L + Y++PTPIQ QAIP ++S R+
Sbjct: 334 ITVKGKNCPKPIKSWVQC----GISMKILNSLKKHAYEKPTPIQAQAIPAIMSGRDLIGI 389
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 390 AKTGSGKTIAFLLPM 404
>gi|294943505|ref|XP_002783894.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
gi|239896718|gb|EER15690.1| DEAD box ATP-dependent RNA helicase, putative [Perkinsus marinus
ATCC 50983]
Length = 135
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/126 (40%), Positives = 68/126 (53%), Gaps = 17/126 (13%)
Query: 79 SKQLVPAVDKEKEKVEDGPSKAKKELNKQI-------ERDAVFRKKYN--IHVSGANVPS 129
SK+ +P VD K +E P KK L KQ+ E + ++ N I V G + P
Sbjct: 12 SKKELPPVDHSK--IEYYP--IKKNLYKQVREISNMPEHEVAQLRQSNGDIRVRGKHCPR 67
Query: 130 PLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLA 189
P+++F + G + +LR L G P PIQ QAIP LL R+ A APTGSGKTLA
Sbjct: 68 PIKSF----AMAGLDVRILRMLDRKGITTPFPIQMQAIPALLCGRDVIAIAPTGSGKTLA 123
Query: 190 FLCPML 195
+L PM+
Sbjct: 124 YLLPMV 129
>gi|380468167|gb|AFD61611.1| vasa [triploid hybrids of tetraploid male x Carassius cuvieri]
Length = 689
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+ + GY +PTP+Q+ IP++ + R+ AC
Sbjct: 240 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVTKSGYVKPTPVQKHGIPIISAGRDLMAC 295
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGK AFL P+L +L + F E+
Sbjct: 296 AQTGSGKAAAFLLPILQRLMADGVAASKFSEV 327
>gi|311771467|dbj|BAJ25759.1| vasa [Pagrus major]
Length = 631
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 55/92 (59%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + CES L + +++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 184 VDVSGTNPPQAIMTFDEAGL---CES-LRKTVSKSGYVKPTPVQKHGIPIISAGRDLMAC 239
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 240 AQTGSGKTAAFLLPILQQLMADGVAASSFSEL 271
>gi|119605384|gb|EAW84978.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41, isoform CRA_b [Homo
sapiens]
Length = 347
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
L+ ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 153 LSMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQ 208
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 209 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|309792203|ref|ZP_07686675.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG-6]
gi|308225744|gb|EFO79500.1| DEAD/DEAH box helicase domain protein [Oscillochloris trichoides
DG6]
Length = 523
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 44/66 (66%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S G +LR L +LGY EPTPIQ QAIPV+LS+ + A A TG+GKT AF P++ +L
Sbjct: 5 SELGLSEPILRVLGDLGYDEPTPIQEQAIPVMLSNSDVIAQAQTGTGKTAAFALPIVQRL 64
Query: 199 RVLFIP 204
R +P
Sbjct: 65 RDERVP 70
>gi|145501031|ref|XP_001436498.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124403638|emb|CAK69101.1| unnamed protein product [Paramecium tetraurelia]
Length = 553
Score = 73.6 bits (179), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 73/133 (54%), Gaps = 6/133 (4%)
Query: 66 AGETVEGFNVFKSSKQLVPAVDKEKEKVED-GPSKAKKELNKQIERDAVFRKKYNIHVSG 124
A E ++ N K+S + K KE V+ K K+ L Q + D + KKY+I + G
Sbjct: 42 AYEQMQIENAMKNSTWSTLMLLKSKEIVKSKWRPKKKQRLWDQYKIDKIL-KKYSIMIEG 100
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
+ P P+++F L + +L+ L+++ K+PTPIQ Q +P +L R+ AP+G
Sbjct: 101 NDPPPPIKSFQDLR----VDHRILKILSKMKIKKPTPIQMQGLPTVLMGRDIIGVAPSGQ 156
Query: 185 GKTLAFLCPMLMK 197
GKTL FL P L++
Sbjct: 157 GKTLVFLLPALLQ 169
>gi|327265659|ref|XP_003217625.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Anolis
carolinensis]
Length = 672
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P PL++F ++ +F + +LR L + G ++PTPIQ Q IP
Sbjct: 209 RHDRVRKKYHILVEGEAIPPPLKSFKEM--KF--PAAILRGLKKKGIQQPTPIQIQGIPT 264
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 265 ILSGRDMIGIAFTGSGKTLVFTLPVIM 291
>gi|452980168|gb|EME79929.1| hypothetical protein MYCFIDRAFT_141983 [Pseudocercospora fijiensis
CIRAD86]
Length = 612
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 72/131 (54%), Gaps = 17/131 (12%)
Query: 67 GETVEGFNVFKSSKQLVPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SG 124
G+ ++G +V + Q +++E V + P+K + +N F K +I V SG
Sbjct: 75 GKWMDGKHVAGPANQ---RLERELFGVANDPTKQQTGIN--------FEKYDDIPVEASG 123
Query: 125 ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGS 184
VP P+ +F + +LL N+ GYK PTP+Q+ +IP+++S R+ ACA TGS
Sbjct: 124 QGVPEPVTSFTNPP----LDDHLLSNIDLAGYKMPTPVQKYSIPIVMSGRDLMACAQTGS 179
Query: 185 GKTLAFLCPML 195
GKT FL P+L
Sbjct: 180 GKTGGFLFPIL 190
>gi|363739175|ref|XP_414629.3| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Gallus
gallus]
Length = 1028
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+V+ G +L L + GY++PTPIQ QAIP +++ R+
Sbjct: 357 ITVKGKGCPKPIKTWVQC----GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGI 412
Query: 180 APTGSGKTLAFLCPM---LMKLRVL 201
A TGSGKT+AFL PM +M R L
Sbjct: 413 AKTGSGKTIAFLLPMFRHIMDQRAL 437
>gi|357138723|ref|XP_003570939.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 35A-like
[Brachypodium distachyon]
Length = 613
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/83 (48%), Positives = 51/83 (61%), Gaps = 4/83 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R+K++I V G VP P R F L RF +LR L E G +PTPIQ Q +PV+LS
Sbjct: 151 LRRKWHILVEGDEVPPPARQFQDL--RF--PEPILRMLREKGIVQPTPIQVQGLPVVLSG 206
Query: 174 RECFACAPTGSGKTLAFLCPMLM 196
R+ A TGSGKTL F+ P++M
Sbjct: 207 RDMIGIAFTGSGKTLVFVLPLIM 229
>gi|358391439|gb|EHK40843.1| hypothetical protein TRIATDRAFT_286438 [Trichoderma atroviride IMI
206040]
Length = 722
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 40/98 (40%), Positives = 60/98 (61%), Gaps = 5/98 (5%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K+LN+ ERD +F++ + I G +P+P+R++ G LL + ++GYKE
Sbjct: 250 SDKDLNEMRERDWRIFKEDFGIATKGGAIPNPMRSW----GESGLPRRLLDIVDKVGYKE 305
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
P+ IQR AIP+ L R+ A TGSGKT AFL P+L+
Sbjct: 306 PSAIQRAAIPIALQARDLIGVAVTGSGKTAAFLLPLLV 343
>gi|224068070|ref|XP_002188600.1| PREDICTED: probable ATP-dependent RNA helicase DDX46 [Taeniopygia
guttata]
Length = 1031
Score = 73.6 bits (179), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+V+ G +L L + GY++PTPIQ QAIP +++ R+
Sbjct: 360 ITVKGKGCPKPIKTWVQC----GISMKILTALKKHGYEKPTPIQTQAIPAIMNGRDLIGI 415
Query: 180 APTGSGKTLAFLCPM---LMKLRVL 201
A TGSGKT+AFL PM +M R L
Sbjct: 416 AKTGSGKTIAFLLPMFRHIMDQRAL 440
>gi|260597188|ref|YP_003209759.1| ATP-dependent RNA helicase RhlE [Cronobacter turicensis z3032]
gi|260216365|emb|CBA29399.1| Putative ATP-dependent RNA helicase rhlE [Cronobacter turicensis
z3032]
Length = 500
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 8 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 65
>gi|326928709|ref|XP_003210518.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Meleagris gallopavo]
Length = 1027
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 51/85 (60%), Gaps = 7/85 (8%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+V+ G +L L + GY++PTPIQ QAIP +++ R+
Sbjct: 356 ITVKGKGCPKPIKTWVQC----GISMKILTALKKHGYEKPTPIQSQAIPAIMNGRDLIGI 411
Query: 180 APTGSGKTLAFLCPM---LMKLRVL 201
A TGSGKT+AFL PM +M R L
Sbjct: 412 AKTGSGKTIAFLLPMFRHIMDQRAL 436
>gi|74207549|dbj|BAE40025.1| unnamed protein product [Mus musculus]
Length = 622
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|395505230|ref|XP_003756946.1| PREDICTED: probable ATP-dependent RNA helicase DDX41 [Sarcophilus
harrisii]
Length = 624
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/87 (44%), Positives = 53/87 (60%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P PL++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 161 RHDRVRKKYHILVEGEGIPPPLKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIPT 216
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 217 ILSGRDMIGIAFTGSGKTLVFTLPVIM 243
>gi|169602158|ref|XP_001794501.1| hypothetical protein SNOG_03958 [Phaeosphaeria nodorum SN15]
gi|160706094|gb|EAT89163.2| hypothetical protein SNOG_03958 [Phaeosphaeria nodorum SN15]
Length = 623
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E V + PSK + +N F K +I V SG VP P+ F
Sbjct: 86 PRVERELFGVPNDPSKQQTGIN--------FEKYDDIPVEASGQGVPEPVTRFTNPP--- 134
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
+ +LL N+ GYK PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L +
Sbjct: 135 -LDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILAQ 189
>gi|226183|prf||1413329A gene vasa
Length = 660
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 39/85 (45%), Positives = 55/85 (64%), Gaps = 7/85 (8%)
Query: 117 KYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
KYN + V+G++VP P++ F R ++ N+ + G+K PTPIQ+ +IPV+ S
Sbjct: 227 KYNNIPVKVTGSDVPQPIQHFTSADLR----DIIIDNVNKSGFKIPTPIQKCSIPVISSG 282
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ ACA TGSGKT AFL P+L KL
Sbjct: 283 RDLMACAQTGSGKTAAFLLPILSKL 307
>gi|405969088|gb|EKC34097.1| ATP-dependent RNA helicase DDX42 [Crassostrea gigas]
Length = 788
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
RKK I VSG N P P+ +F + FG + L+ + + + +PTPIQ Q IP+ L+
Sbjct: 279 LRKKLGIRVSGFNPPKPVSSF----AHFGFDENLMSAIRKSEFSQPTPIQAQGIPLALNG 334
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AFL P+L+ +
Sbjct: 335 RDIIGIAKTGSGKTAAFLWPLLVHI 359
>gi|74191640|dbj|BAE30391.1| unnamed protein product [Mus musculus]
Length = 622
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|194751055|ref|XP_001957842.1| GF23818 [Drosophila ananassae]
gi|190625124|gb|EDV40648.1| GF23818 [Drosophila ananassae]
Length = 795
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
L+++ RD R+ + V+G + P P+ +F FG + LL+ + + Y +PTPIQ
Sbjct: 239 LDEEKVRD--LRRTLGVKVTGPSPPKPVTSF----GHFGFDEPLLKAVRKAEYTQPTPIQ 292
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
QA+P LS R+ A TGSGKT AF+ P+LM L
Sbjct: 293 AQAVPTALSGRDIIGIAKTGSGKTAAFIWPLLMHL 327
>gi|2558535|emb|CAA72735.1| RNA helicase (DEAD box) [Danio rerio]
Length = 700
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + C+S L +N+++ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 249 VDVSGSNPPKAIMTFEEAGL---CDS-LSKNVSKSGYVKPTPVQKHGIPIISAGRDLMAC 304
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 305 AQTGSGKTAAFLLPILQRFMTDGVAASKFSEI 336
>gi|356511678|ref|XP_003524550.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 46-like [Glycine
max]
Length = 774
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 37/86 (43%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R ++ I V+G NVP PL +F G S LLR + G+ PTPIQ Q+ P+ L
Sbjct: 150 YRHRHEISVTGDNVPPPLASF----GSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQG 205
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + L+
Sbjct: 206 RDIVAIAKTGSGKTLGYLVPAFIHLK 231
>gi|440635646|gb|ELR05565.1| hypothetical protein GMDG_07485 [Geomyces destructans 20631-21]
Length = 690
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 14/114 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E + D P+K + +N F K +I V SG +VP P+ F
Sbjct: 152 PRVERELFGIADDPTKQQTGIN--------FEKYDDIPVEASGHDVPEPVLKFTNPP--- 200
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +LLRN+ YK PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L
Sbjct: 201 -LDDHLLRNIDLAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPIL 253
>gi|312372785|gb|EFR20671.1| hypothetical protein AND_19720 [Anopheles darlingi]
Length = 1061
Score = 73.2 bits (178), Expect = 6e-11, Method: Composition-based stats.
Identities = 34/76 (44%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ +SG N P+ + +F ++ G LL N+ GY +PTPIQR AIP++L R+ C
Sbjct: 105 VKISGENPPAHIESF----AQSGLNEVLLNNVRRSGYNKPTPIQRHAIPIVLKGRDMMGC 160
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AF+ PM+
Sbjct: 161 AQTGSGKTAAFMLPMI 176
>gi|429085612|ref|ZP_19148582.1| ATP-dependent RNA helicase RhlE [Cronobacter condimenti 1330]
gi|426545220|emb|CCJ74623.1| ATP-dependent RNA helicase RhlE [Cronobacter condimenti 1330]
Length = 474
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|389841642|ref|YP_006343726.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii ES15]
gi|387852118|gb|AFK00216.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii ES15]
Length = 474
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|160380700|sp|A6SFW7.2|DBP2_BOTFB RecName: Full=ATP-dependent RNA helicase dbp2
Length = 514
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR ++NI V G N+P P+ TF G +Y++ + G+ PTPIQ Q P+ L
Sbjct: 82 AKFRAQHNIAVQGPNIPKPVETF----DEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMAL 137
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A TGSGKTL + P ++ + L P D
Sbjct: 138 SGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGD 174
>gi|156064127|ref|XP_001597985.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980]
gi|160380609|sp|A7E449.1|DBP2_SCLS1 RecName: Full=ATP-dependent RNA helicase dbp2
gi|154690933|gb|EDN90671.1| conserved hypothetical protein [Sclerotinia sclerotiorum 1980
UF-70]
Length = 572
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR ++NI V G N+P P+ TF G +Y++ + G+ PTPIQ Q P+ L
Sbjct: 129 AKFRAQHNIAVQGPNIPKPVETF----DEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMAL 184
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A TGSGKTL + P ++ + L P D
Sbjct: 185 SGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGD 221
>gi|154298956|ref|XP_001549899.1| p68 RNA helicase [Botryotinia fuckeliana B05.10]
Length = 473
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR ++NI V G N+P P+ TF G +Y++ + G+ PTPIQ Q P+ L
Sbjct: 41 AKFRAQHNIAVQGPNIPKPVETF----DEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMAL 96
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A TGSGKTL + P ++ + L P D
Sbjct: 97 SGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGD 133
>gi|427797625|gb|JAA64264.1| Putative abstrakt, partial [Rhipicephalus pulchellus]
Length = 656
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
+N +E+ R+KY I V G +P+P+ TF ++ +F +L +L G +PTPIQ
Sbjct: 187 VNTTLEQQEKVRQKYRILVEGEGIPAPITTFKEM--KF--PRTILSSLRHKGITKPTPIQ 242
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q +P +LS R+ A TGSGKTL F+ P+LM
Sbjct: 243 MQGLPAVLSGRDMIGIAFTGSGKTLVFVLPLLM 275
>gi|320590111|gb|EFX02556.1| dead deah box RNA helicase [Grosmannia clavigera kw1407]
Length = 1178
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG +VP P++ + S G +L + +LGY +PT IQ QA+PV++S R+
Sbjct: 525 GIKVSGKDVPKPVQKW----SHCGLTRPMLEVIEQLGYDKPTAIQMQALPVIMSGRDVIG 580
Query: 179 CAPTGSGKTLAFLCPMLMKL 198
A TGSGKT+AFL PM +
Sbjct: 581 VAKTGSGKTMAFLVPMFRHI 600
>gi|391337071|ref|XP_003742897.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like
[Metaseiulus occidentalis]
Length = 1005
Score = 73.2 bits (178), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 38/86 (44%), Positives = 54/86 (62%), Gaps = 4/86 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E +A+ + I V G NVP P++T+ + G +L L +L +++PTPIQ QA+P
Sbjct: 313 EVEALRAEMEGITVKGKNVPKPIKTW----PQAGVSKKVLDVLKKLNFEKPTPIQCQALP 368
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPM 194
++S R+ A A TGSGKTLAFL PM
Sbjct: 369 AIMSGRDLIAIAKTGSGKTLAFLLPM 394
>gi|15030112|gb|AAH11308.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 622
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|347836738|emb|CCD51310.1| hypothetical protein [Botryotinia fuckeliana]
Length = 563
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR ++NI V G N+P P+ TF G +Y++ + G+ PTPIQ Q P+ L
Sbjct: 131 AKFRAQHNIAVQGPNIPKPVETF----DEAGFPAYVMTEVKAQGFPAPTPIQSQGWPMAL 186
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A TGSGKTL + P ++ + L P D
Sbjct: 187 SGRDVVGIAETGSGKTLTYCLPAIVHINAQPLLAPGD 223
>gi|170084181|ref|XP_001873314.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650866|gb|EDR15106.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 450
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 52/82 (63%)
Query: 117 KYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDREC 176
++ + + G++VPS TF ++ R+ +L NL++ GY PT IQ +PVL R+
Sbjct: 3 RHRVKMKGSSVPSQADTFGEMKERYDIPPHLFSNLSKCGYSHPTSIQSSGMPVLFESRDL 62
Query: 177 FACAPTGSGKTLAFLCPMLMKL 198
A +PTG+GKTL++L P+L KL
Sbjct: 63 AAISPTGTGKTLSYLFPVLSKL 84
>gi|429094723|ref|ZP_19157248.1| ATP-dependent RNA helicase RhlE [Cronobacter dublinensis 1210]
gi|426740207|emb|CCJ83361.1| ATP-dependent RNA helicase RhlE [Cronobacter dublinensis 1210]
Length = 479
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|226506900|ref|NP_001142117.1| uncharacterized protein LOC100274281 [Zea mays]
gi|194704910|gb|ACF86539.1| unknown [Zea mays]
gi|194707190|gb|ACF87679.1| unknown [Zea mays]
gi|414875847|tpg|DAA52978.1| TPA: putative DEAD-box ATP-dependent RNA helicase family protein
[Zea mays]
Length = 494
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G +VP P+R F + G Y+L+ + + G+ EPTPIQ Q P+ L
Sbjct: 73 YRRRREITVDGRDVPKPVREFRDV----GFPEYVLQEITKAGFVEPTPIQSQGWPMALRG 128
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHV 153
>gi|194440585|dbj|BAG65665.1| vasa [Gryllus bimaculatus]
Length = 650
Score = 73.2 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG NVP + F G ++L N+ + GY +PTPIQ+ AIP+++S R+ AC
Sbjct: 202 VKVSGENVPRAIDRF----ENSGLRQFVLDNIKKSGYAKPTPIQKHAIPIIMSGRDLMAC 257
Query: 180 APTGSGKTLAFLCPML 195
A TGSGKT AFL P++
Sbjct: 258 AQTGSGKTAAFLLPII 273
>gi|429122441|ref|ZP_19183020.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii 680]
gi|426323043|emb|CCK13757.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii 680]
Length = 467
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|363746590|ref|XP_003643723.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like, partial
[Gallus gallus]
Length = 497
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 55/87 (63%), Gaps = 4/87 (4%)
Query: 110 RDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPV 169
R RKKY+I V G +P P+++F ++ +F + +LR L + G ++PTPIQ Q IP
Sbjct: 34 RHNRVRKKYHILVEGEGIPPPIKSFKEM--KF--PAAILRGLKKKGIQQPTPIQIQGIPT 89
Query: 170 LLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 90 ILSGRDMIGIAFTGSGKTLVFTLPVIM 116
>gi|270047502|ref|NP_598820.2| probable ATP-dependent RNA helicase DDX41 [Mus musculus]
gi|341940433|sp|Q91VN6.2|DDX41_MOUSE RecName: Full=Probable ATP-dependent RNA helicase DDX41; AltName:
Full=DEAD box protein 41
gi|74142777|dbj|BAE33914.1| unnamed protein product [Mus musculus]
Length = 622
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|156934713|ref|YP_001438629.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii ATCC
BAA-894]
gi|156532967|gb|ABU77793.1| hypothetical protein ESA_02548 [Cronobacter sakazakii ATCC BAA-894]
Length = 474
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|432117756|gb|ELK37909.1| Putative ATP-dependent RNA helicase DDX46 [Myotis davidii]
Length = 1191
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 56/93 (60%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 589 VFRLEMEGIIVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQAQAIPAIM 644
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 645 SGRDLIGIAKTGSGKTIAFLLPMFRHIMDQRSL 677
>gi|224112054|ref|XP_002316069.1| predicted protein [Populus trichocarpa]
gi|222865109|gb|EEF02240.1| predicted protein [Populus trichocarpa]
Length = 569
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
V+R+++ + +G NVP+P TF G S +LR++ G+ PTPIQ Q P+ L
Sbjct: 129 VYRQEHEVSATGDNVPAPFMTF----EATGFPSEILRDIHSAGFVSPTPIQAQTWPIALQ 184
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + L+
Sbjct: 185 SRDIVAIAKTGSGKTLGYLIPAFILLQ 211
>gi|194760837|ref|XP_001962639.1| GF14338 [Drosophila ananassae]
gi|190616336|gb|EDV31860.1| GF14338 [Drosophila ananassae]
Length = 1472
Score = 73.2 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/79 (48%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG NVP P++ F G + + N+ + GYK PTPIQ+ +IPV+ R+ AC
Sbjct: 1045 VKVSGENVPKPIKKF----EDAGLRTIVTENVIKSGYKVPTPIQKVSIPVINEGRDMMAC 1100
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 1101 AQTGSGKTAAFLLPILSKL 1119
>gi|356573317|ref|XP_003554808.1| PREDICTED: LOW QUALITY PROTEIN: DEAD-box ATP-dependent RNA helicase
46-like [Glycine max]
Length = 741
Score = 73.2 bits (178), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/90 (42%), Positives = 50/90 (55%), Gaps = 4/90 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R ++ I V+G NVP PL +F G S LLR + G+ PTPIQ Q+ P+ L
Sbjct: 150 YRHRHEISVTGDNVPPPLASF----GSTGFPSELLREVQNAGFSAPTPIQAQSWPIALQG 205
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRVLFI 203
R+ A A TGSGKTL +L P + L I
Sbjct: 206 RDIVAIAKTGSGKTLGYLIPAFITSSALVI 235
>gi|218187683|gb|EEC70110.1| hypothetical protein OsI_00766 [Oryza sativa Indica Group]
Length = 470
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G +VP P+R F + G Y+L+ + + G+ EPTPIQ Q P+ L
Sbjct: 75 YRRRREITVEGRDVPKPVREFRDV----GFPEYVLQEITKAGFVEPTPIQSQGWPMALRG 130
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 131 RDLIGIAETGSGKTLAYLLPAIVHV 155
>gi|92081528|dbj|BAE93311.1| zinc finger protein [Ciona intestinalis]
Length = 556
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 49/79 (62%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + +L N+ + GY PTP+Q+ +IP++ +DR+ AC
Sbjct: 97 VEVSGLNAPKCISTF----EMANLQETILVNVQKAGYDRPTPVQKYSIPIINADRDLMAC 152
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 153 AQTGSGKTAAFLLPVLTKL 171
>gi|406699116|gb|EKD02333.1| hypothetical protein A1Q2_03389 [Trichosporon asahii var. asahii
CBS 8904]
Length = 437
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR+ ++ + G N+P P+ +F G Y++ + +G+KEP+PIQ QA P+ L
Sbjct: 91 AEFRRAKDMRIQGTNIPRPITSF----EEAGFPEYVMSEIRAMGFKEPSPIQCQAWPMAL 146
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A A TGSGKT++F P ++ + L P D
Sbjct: 147 SGRDVVAIAETGSGKTISFALPAMVHINAQPLLAPGD 183
>gi|401889158|gb|EJT53098.1| ATP-dependent RNA helicase DBP2 (p68-like protein) [Trichosporon
asahii var. asahii CBS 2479]
Length = 387
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 36/97 (37%), Positives = 56/97 (57%), Gaps = 6/97 (6%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
A FR+ ++ + G N+P P+ +F G Y++ + +G+KEP+PIQ QA P+ L
Sbjct: 41 AEFRRAKDMRIQGTNIPRPITSF----EEAGFPEYVMSEIRAMGFKEPSPIQCQAWPMAL 96
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKLRV--LFIPFD 206
S R+ A A TGSGKT++F P ++ + L P D
Sbjct: 97 SGRDVVAIAETGSGKTISFALPAMVHINAQPLLAPGD 133
>gi|351708460|gb|EHB11379.1| Putative ATP-dependent RNA helicase DDX46 [Heterocephalus glaber]
Length = 1255
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 52/83 (62%), Gaps = 5/83 (6%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 623 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 678
Query: 172 SDRECFACAPTGSGKTLAFLCPM 194
S R+ A TGSGKT+AFL PM
Sbjct: 679 SGRDLIGIAKTGSGKTIAFLLPM 701
>gi|449308931|ref|YP_007441287.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii SP291]
gi|449098964|gb|AGE86998.1| ATP-dependent RNA helicase RhlE [Cronobacter sakazakii SP291]
Length = 444
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTPIQRQAIPV+LS ++ A A TG+GKT F P+L +L
Sbjct: 6 LGLSPEILRAIAEQGYNEPTPIQRQAIPVVLSGKDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|358400668|gb|EHK49994.1| hypothetical protein TRIATDRAFT_161675, partial [Trichoderma
atroviride IMI 206040]
Length = 1258
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 86/171 (50%), Gaps = 34/171 (19%)
Query: 37 DDFSFVEGEKTDPE-KAMVSFVKKRKRKSIAGETVEGFNVFKSSKQLVPAVDKEKEKVED 95
DD++F + + DP A+++ KRK+K I P+VD K ++
Sbjct: 545 DDYAFED--QADPNADALLTIASKRKKKDI------------------PSVDYSKIDLQ- 583
Query: 96 GPSKAK-----KELNKQIERDAV-FRKKYN-IHVSGANVPSPLRTFVKLSSRFGCESYLL 148
P + ELN E D R + + I V+G +VP P++ + + G L
Sbjct: 584 -PIRKNFWVEPAELNTLSEADVTDLRLELDGIKVNGKDVPKPVQKWAQC----GLTRQTL 638
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
++ LG+++PTPIQ QA+P L+S R+ A TGSGKT+AFL PM ++
Sbjct: 639 DVISSLGFEKPTPIQMQALPSLMSGRDVVGVAKTGSGKTMAFLLPMFRHIK 689
>gi|348575047|ref|XP_003473301.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Cavia
porcellus]
Length = 622
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|401426831|ref|XP_003877899.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
gi|322494146|emb|CBZ29443.1| ATP-dependent RNA helicase-like protein,putative [Leishmania
mexicana MHOM/GT/2001/U1103]
Length = 584
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 114 FRKKYNI------HVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQA 166
F+KK NI V+G ++P+P+ F L ++ NL +K PTPIQ QA
Sbjct: 112 FKKKRNIWRRNDLQVTGTDLPAPIEHFSDLVRPPLNVPRNVVNNLFARHHKVPTPIQMQA 171
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
I L+ R+ ACAPTGSGKT+AFL P+ L+
Sbjct: 172 ISSLIHHRDVLACAPTGSGKTIAFLVPLFALLK 204
>gi|300120116|emb|CBK19670.2| unnamed protein product [Blastocystis hominis]
Length = 607
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R ++ + + G N P P+ T+ ++ G +L + +LGY +P PIQ QAIP ++S
Sbjct: 28 IRDQWRMKIRGRNYPRPVFTW----AQCGLTEKILHVINKLGYAKPFPIQSQAIPTVMSG 83
Query: 174 RECFACAPTGSGKTLAFLCPM 194
RE A A TGSGKTLA+L P+
Sbjct: 84 REVIAVAKTGSGKTLAYLLPL 104
>gi|444315728|ref|XP_004178521.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
gi|387511561|emb|CCH59002.1| hypothetical protein TBLA_0B01590 [Tetrapisispora blattae CBS 6284]
Length = 929
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRV 200
FG +++ N+ + GYK+PTPIQR+ IP++L R+ A TGSGKT AFL PM+ KL+
Sbjct: 110 FGFNRFIMNNINKKGYKQPTPIQRKTIPLILQKRDIVGMARTGSGKTAAFLLPMIEKLKT 169
>gi|384499183|gb|EIE89674.1| hypothetical protein RO3G_14385 [Rhizopus delemar RA 99-880]
Length = 270
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/86 (45%), Positives = 51/86 (59%), Gaps = 2/86 (2%)
Query: 116 KKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRE 175
K +++ VSG+ VP PL TF +LS G LL+N+ LG+ T IQRQAI L+ R+
Sbjct: 31 KAHSLEVSGSQVPKPLTTFDQLSDLLG--PTLLQNIESLGWTSATGIQRQAITAALAGRD 88
Query: 176 CFACAPTGSGKTLAFLCPMLMKLRVL 201
AP SGKT AFL P L+ R +
Sbjct: 89 VIGWAPKHSGKTGAFLIPTLVHCRSM 114
>gi|196012612|ref|XP_002116168.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
gi|190581123|gb|EDV21201.1| hypothetical protein TRIADDRAFT_30653 [Trichoplax adhaerens]
Length = 976
Score = 73.2 bits (178), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 52/86 (60%), Gaps = 4/86 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
E D V + NI V G P+P++ + ++ G LL +L + Y++PTP+Q QAIP
Sbjct: 283 EADDVRLQLENIKVRGKGCPTPVKNW----AQCGLSVKLLDSLKRVKYEKPTPVQAQAIP 338
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPM 194
++S R+ A TGSGKTLAFL PM
Sbjct: 339 SIMSGRDVIGIAKTGSGKTLAFLLPM 364
>gi|148709265|gb|EDL41211.1| DEAD (Asp-Glu-Ala-Asp) box polypeptide 41 [Mus musculus]
Length = 633
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 169 ERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGILHPTPIQIQGIP 224
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 225 TILSGRDMIGIAFTGSGKTLVFTLPVIM 252
>gi|448746637|ref|ZP_21728302.1| DEAD-like helicase [Halomonas titanicae BH1]
gi|445565565|gb|ELY21674.1| DEAD-like helicase [Halomonas titanicae BH1]
Length = 418
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S G + LLR + GY EPTPIQRQAIPV+L R+ A A TG+GKT F PML +L
Sbjct: 4 SELGLHADLLRAVTAQGYTEPTPIQRQAIPVVLEGRDMLASAQTGTGKTAGFTLPMLQRL 63
>gi|171693513|ref|XP_001911681.1| hypothetical protein [Podospora anserina S mat+]
gi|170946705|emb|CAP73508.1| unnamed protein product [Podospora anserina S mat+]
Length = 694
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 45/114 (39%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E D PSK +N F K +I V SG +VP P+ TF S
Sbjct: 152 PRVERELFGTADDPSKQHTGIN--------FEKYDDIPVTPSGHDVPEPVLTF----SHP 199
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +LL N+ YK PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L
Sbjct: 200 PLDKHLLSNIELARYKIPTPVQKYSIPIVIGGRDLMACAQTGSGKTGGFLFPIL 253
>gi|366047568|dbj|BAL43034.1| ATP-dependent RNA helicase DDX4 [Oreochromis niloticus]
Length = 646
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 171 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 225
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 226 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQL 270
>gi|366047565|dbj|BAL43033.1| ATP-dependent RNA helicase DDX4 [Oreochromis niloticus]
Length = 644
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 169 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 223
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 224 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILQQL 268
>gi|393220338|gb|EJD05824.1| P-loop containing nucleoside triphosphate hydrolase protein
[Fomitiporia mediterranea MF3/22]
Length = 740
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/96 (40%), Positives = 60/96 (62%), Gaps = 5/96 (5%)
Query: 101 KKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEP 159
+K L++ +RD +FR+ ++I G +P PLR++ + +L + ++GYKEP
Sbjct: 283 EKPLSQMKDRDWRIFREDFSIATRGGQIPHPLRSWTESE----IPPTILEVVEKVGYKEP 338
Query: 160 TPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ IQRQAIP+ L +R+ A TGSGKT AF+ PML
Sbjct: 339 SAIQRQAIPIGLQNRDLIGIAETGSGKTAAFVIPML 374
>gi|222617918|gb|EEE54050.1| hypothetical protein OsJ_00740 [Oryza sativa Japonica Group]
Length = 468
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G +VP P+R F + G Y+L+ + + G+ EPTPIQ Q P+ L
Sbjct: 73 YRRRREITVEGRDVPKPVREFRDV----GFPEYVLQEITKAGFVEPTPIQSQGWPMALRG 128
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHV 153
>gi|410915182|ref|XP_003971066.1| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Takifugu
rubripes]
Length = 1040
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I V G P P++T+V+ G +L L + GY++PTPIQ QAIP ++S R+
Sbjct: 349 GIIVKGKGCPKPIKTWVQC----GVSMKILSALKKHGYEKPTPIQAQAIPAVMSGRDLIG 404
Query: 179 CAPTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 405 IAKTGSGKTIAFLLPM 420
>gi|193683780|ref|XP_001952119.1| PREDICTED: ATP-dependent RNA helicase abstrakt-like [Acyrthosiphon
pisum]
Length = 615
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 52/88 (59%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER R K I V G +P PL++F ++ G ++ L++ G K+PTPIQ Q IP
Sbjct: 151 ERHENVRLKLRILVEGEEIPPPLKSFKEMKLNKG----IMAGLSQKGIKKPTPIQIQGIP 206
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F+ P+LM
Sbjct: 207 TVLSGRDMIGIAFTGSGKTLVFVLPLLM 234
>gi|4126714|dbj|BAA36710.1| DEAD-Box Protein [Ciona intestinalis]
Length = 669
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + +L N+ + GY PTP+Q+ +IP++ +DR+ AC
Sbjct: 201 VEVSGLNAPKCISTFEMAN----LQETILVNVQKAGYDRPTPVQKYSIPIINADRDLMAC 256
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 257 AQTGSGKTAAFLLPVLTKL 275
>gi|143456452|sp|Q0DB53.2|RH52A_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 52A
gi|51090883|dbj|BAD35456.1| putative DEAD-box protein 3 [Oryza sativa Japonica Group]
gi|222635845|gb|EEE65977.1| hypothetical protein OsJ_21891 [Oryza sativa Japonica Group]
Length = 602
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 51/84 (60%), Gaps = 6/84 (7%)
Query: 117 KYNI--HVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
KY+I VSG +VP P F G +LRN+A GY+ PTP+QR ++P+ L+ R
Sbjct: 67 KYDIPVEVSGEDVPPPADGF----EAAGLVEAVLRNVARCGYESPTPVQRYSMPIALAGR 122
Query: 175 ECFACAPTGSGKTLAFLCPMLMKL 198
+ ACA TGSGKT AF P++ L
Sbjct: 123 DLMACAQTGSGKTAAFCLPVVSGL 146
>gi|358335026|dbj|GAA28925.2| probable ATP-dependent RNA helicase DDX46, partial [Clonorchis
sinensis]
Length = 746
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 38/80 (47%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NI V G + P PL+ +V+ G S LL L + +PTPIQ QA+PVL+S R+
Sbjct: 343 NIRVRGQDCPKPLKNWVQ----AGISSRLLSCLKRNNFDKPTPIQCQALPVLMSGRDMIG 398
Query: 179 CAPTGSGKTLAFLCPMLMKL 198
A TGSGKTLAFL P++ L
Sbjct: 399 IAKTGSGKTLAFLVPLMRHL 418
>gi|167522064|ref|XP_001745370.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776328|gb|EDQ89948.1| predicted protein [Monosiga brevicollis MX1]
Length = 498
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 47/77 (61%), Gaps = 4/77 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
NI G VP P++T+ + G +L L +L Y+ PTPIQ QAIPV++S R+
Sbjct: 47 NIKTRGKEVPRPIKTW----GQTGLSKTILAILKQLKYENPTPIQAQAIPVVMSGRDMLG 102
Query: 179 CAPTGSGKTLAFLCPML 195
A TG GKTLAFL P+L
Sbjct: 103 IAKTGCGKTLAFLLPLL 119
>gi|74096143|ref|NP_001027593.1| DEAD-Box Protein [Ciona intestinalis]
gi|4126716|dbj|BAA36711.1| DEAD-Box Protein [Ciona intestinalis]
Length = 659
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/79 (44%), Positives = 50/79 (63%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + +L N+ + GY PTP+Q+ +IP++ +DR+ AC
Sbjct: 191 VEVSGLNAPKCISTFEMAN----LQETILVNVQKAGYDRPTPVQKYSIPIINADRDLMAC 246
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AFL P+L KL
Sbjct: 247 AQTGSGKTAAFLLPVLTKL 265
>gi|410914046|ref|XP_003970499.1| PREDICTED: probable ATP-dependent RNA helicase DDX41-like [Takifugu
rubripes]
Length = 614
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/93 (39%), Positives = 55/93 (59%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN R RKK++I V G N+P+P+++F ++ +L+ L + G PTPIQ
Sbjct: 145 LNMPDTRHERVRKKFHILVDGDNIPAPIKSFREMK----LPPAILKGLKKKGIVHPTPIQ 200
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q +P +LS R+ A TGSGKTL F+ P++M
Sbjct: 201 IQGMPTVLSGRDMIGIAFTGSGKTLVFILPIIM 233
>gi|403223854|dbj|BAM41984.1| DEAD-box family RNA-dependent helicase [Theileria orientalis strain
Shintoku]
Length = 587
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 36/77 (46%), Positives = 50/77 (64%), Gaps = 4/77 (5%)
Query: 122 VSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAP 181
VSG +VP+P+ F + S Y+L ++ + G+KEPTPIQ Q+ PV LS R+ A
Sbjct: 140 VSGKDVPNPVVKFEQTS----FPKYILSSIEQAGFKEPTPIQVQSWPVALSGRDMIGIAE 195
Query: 182 TGSGKTLAFLCPMLMKL 198
TGSGKTLAFL P ++ +
Sbjct: 196 TGSGKTLAFLLPAIVHI 212
>gi|449440640|ref|XP_004138092.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
gi|449522189|ref|XP_004168110.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 30-like [Cucumis
sativus]
Length = 622
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 55/86 (63%), Gaps = 4/86 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
++R++ +I V G +VP P+R+F + + +Y L +A+LG+ EPTPIQ Q P+ L
Sbjct: 182 IYRERRDIRVEGYDVPRPIRSFQEAN----FPAYCLDVIAKLGFVEPTPIQAQGWPMALK 237
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 238 GRDLVGIAETGSGKTLAYLLPAVIHI 263
>gi|431892646|gb|ELK03079.1| Putative ATP-dependent RNA helicase DDX46 [Pteropus alecto]
Length = 1580
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/87 (42%), Positives = 53/87 (60%), Gaps = 5/87 (5%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P++++V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 680 VFRLEMEGITVKGKGCPKPIKSWVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 735
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
S R+ A TGSGKT+AFL PM +
Sbjct: 736 SGRDLIGIAKTGSGKTIAFLLPMFRHI 762
>gi|312373386|gb|EFR21141.1| hypothetical protein AND_17503 [Anopheles darlingi]
Length = 615
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
R + VSG + P+P+ +F + FG + L++ + + Y +PTPIQ QAIP L
Sbjct: 73 LRNTLGVKVSGPSPPNPVTSF----AHFGFDESLMKAIRKSEYSQPTPIQAQAIPAALGG 128
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKT AFL PML+ +
Sbjct: 129 RDIIGIAKTGSGKTAAFLWPMLVHI 153
>gi|348161390|gb|AEP68013.1| vasa [Sebastes schlegelii]
Length = 649
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 37/92 (40%), Positives = 57/92 (61%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L +N+++ GY +PTP+Q+ +P++ + R+ AC
Sbjct: 200 VDVSGTNPPPAIMTFEEAAL---CES-LRKNVSKSGYVKPTPVQKYGMPIISAGRDLMAC 255
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F E+
Sbjct: 256 AQTGSGKTAAFLLPILQQLMADGVAASSFSEV 287
>gi|449433365|ref|XP_004134468.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
sativus]
Length = 1125
Score = 72.8 bits (177), Expect = 8e-11, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
V+R+++ + SG NVP+P TF G +LR + G+ PTPIQ Q P+ L
Sbjct: 445 VYRRQHEVTASGDNVPAPFMTF----EATGFPPEILREIYSAGFSSPTPIQAQTWPIALQ 500
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + LR
Sbjct: 501 GRDIVAIAKTGSGKTLGYLLPAFILLR 527
>gi|359396764|ref|ZP_09189815.1| ATP-dependent RNA helicase rhlE [Halomonas boliviensis LC1]
gi|357969442|gb|EHJ91890.1| ATP-dependent RNA helicase rhlE [Halomonas boliviensis LC1]
Length = 418
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 33/60 (55%), Positives = 39/60 (65%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S G + LLR + GY EPTPIQRQAIPV+L R+ A A TG+GKT F PML +L
Sbjct: 4 SELGLHADLLRAVTAQGYTEPTPIQRQAIPVVLEGRDMLASAQTGTGKTAGFTLPMLQRL 63
>gi|260947074|ref|XP_002617834.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
gi|238847706|gb|EEQ37170.1| hypothetical protein CLUG_01293 [Clavispora lusitaniae ATCC 42720]
Length = 896
Score = 72.8 bits (177), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 65/113 (57%), Gaps = 14/113 (12%)
Query: 88 KEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
+E + V D + +EL Q+E I V G+N P P+ + S+ G S +
Sbjct: 262 QESQSVSDLTEEEVEELRLQME---------GIKVKGSNCPRPIWMW----SQLGFSSTI 308
Query: 148 LRNLAE-LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
+ + E L YK+PTPIQ QA+P+++S R+ + A TGSGKT+AF+ PML ++
Sbjct: 309 MSLIEEKLEYKKPTPIQCQALPIIMSGRDILSIAKTGSGKTMAFVLPMLRHVQ 361
>gi|149248004|ref|XP_001528389.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|152032662|sp|A5DU73.1|PRP28_LODEL RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|146448343|gb|EDK42731.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 597
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 57/100 (57%), Gaps = 5/100 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
+ K L++ +RD +F + Y I G +P R++ G + +L +L G+++
Sbjct: 152 STKLLSEMTDRDWRIFNEDYGITTKGKKIPHATRSW----DESGLDPKILASLKSFGFRQ 207
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PTP+QR +IP+ L R+ A TGSGKTLAFL P+L L
Sbjct: 208 PTPVQRASIPISLELRDVVGVAETGSGKTLAFLLPLLHYL 247
>gi|430024070|gb|AGA35554.1| vasa protein, partial [Cirrhinus mrigala]
Length = 458
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/92 (41%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG+N P + TF + CES L +N+A+ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 9 VDVSGSNPPKAIMTFDEAGL---CES-LRKNVAKSGYVKPTPVQKHGIPIISAGRDLMAC 64
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L + + F E+
Sbjct: 65 AQTGSGKTAAFLLPILQRFMADGVAASKFSEV 96
>gi|292487709|ref|YP_003530582.1| ATP-dependent RNA helicase rhlE [Erwinia amylovora CFBP1430]
gi|292898944|ref|YP_003538313.1| ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|428784645|ref|ZP_19002136.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
gi|291198792|emb|CBJ45901.1| putative ATP-dependent RNA helicase [Erwinia amylovora ATCC 49946]
gi|291553129|emb|CBA20174.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
CFBP1430]
gi|312171822|emb|CBX80079.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora ATCC
BAA-2158]
gi|426276207|gb|EKV53934.1| putative ATP-dependent RNA helicase rhlE [Erwinia amylovora
ACW56400]
Length = 470
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L L
Sbjct: 6 LGLNADILRAVAEQGYNEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLLQLL 63
>gi|50305859|ref|XP_452890.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660559|sp|Q6CT49.1|PRP28_KLULA RecName: Full=Pre-mRNA-splicing ATP-dependent RNA helicase PRP28
gi|49642023|emb|CAH01741.1| KLLA0C15433p [Kluyveromyces lactis]
Length = 539
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/176 (30%), Positives = 85/176 (48%), Gaps = 18/176 (10%)
Query: 40 SFVEGEKTDPEKAMVSFVKKRK------------RKSIAGETVEGFNVFKSSKQLVPAVD 87
+F + E+ + KA+ V KRK + ++ E + + + S L+
Sbjct: 28 TFPQPEEEEASKALSHTVIKRKDNYRNLDEDELYEEQVSNEPDDLLFLARKSADLLKKRQ 87
Query: 88 KEKEKVED---GPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
E E + D G ++K+ + RD + + +NI G V PLR + +L +
Sbjct: 88 NEDESIVDNYLGKHWSEKKYEEMSTRDWRILSEDFNISSKGGTVEKPLRNWHEL--KLIP 145
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
E L +L Y EPT IQR IP ++++R+ A TGSGKTLAFL P+L+KL
Sbjct: 146 EDLLNIITNDLHYNEPTSIQRSTIPNVINNRDFIGVASTGSGKTLAFLLPILIKLH 201
>gi|431892730|gb|ELK03163.1| hypothetical protein PAL_GLEAN10016954 [Pteropus alecto]
Length = 1458
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/93 (44%), Positives = 56/93 (60%), Gaps = 4/93 (4%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LN ER RKKY+I V G +P P+++F ++ +F + +LR L + G PTPIQ
Sbjct: 989 LNMSEERHERVRKKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQ 1044
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
Q IP +LS R+ A TGSGKTL F P++M
Sbjct: 1045 IQGIPTILSGRDMIGIAFTGSGKTLVFTLPVIM 1077
>gi|14042692|dbj|BAB55355.1| unnamed protein product [Homo sapiens]
Length = 622
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 109 ERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIP 168
ER R+KY+I V G +P P+++F ++ +F + +LR L + G PTPIQ Q IP
Sbjct: 158 ERHERVREKYHILVEGDGIPPPIKSFKEM--KF--PAAILRGLKKKGIHHPTPIQIQGIP 213
Query: 169 VLLSDRECFACAPTGSGKTLAFLCPMLM 196
+LS R+ A TGSGKTL F P++M
Sbjct: 214 TILSGRDMIGIAFTGSGKTLVFTLPVIM 241
>gi|310790963|gb|EFQ26496.1| DEAD/DEAH box helicase [Glomerella graminicola M1.001]
Length = 1112
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 49/76 (64%), Gaps = 4/76 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + ++ G L LA++G+ +PT IQ QA+PV++S R+
Sbjct: 476 GIKVSGKNIPKPVQKW----AQCGLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVG 531
Query: 179 CAPTGSGKTLAFLCPM 194
A TGSGKTLAFL PM
Sbjct: 532 VAKTGSGKTLAFLLPM 547
>gi|157873736|ref|XP_001685372.1| putative RNA helicase [Leishmania major strain Friedlin]
gi|68128444|emb|CAJ08547.1| putative RNA helicase [Leishmania major strain Friedlin]
Length = 580
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 39/93 (41%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 114 FRKKYNI------HVSGANVPSPLRTFVKL-SSRFGCESYLLRNLAELGYKEPTPIQRQA 166
F+KK NI V+G ++P+P+ F L ++ NL +K PTPIQ QA
Sbjct: 112 FKKKRNIWRRNDLQVTGTDLPAPIEHFSDLVRPPLNVPRNVVNNLFARQHKVPTPIQMQA 171
Query: 167 IPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
I L+ R+ ACAPTGSGKT+AFL P+ L+
Sbjct: 172 ISSLIHHRDVLACAPTGSGKTIAFLVPLFALLK 204
>gi|340709533|ref|XP_003393360.1| PREDICTED: ATP-dependent RNA helicase vasa, isoform A-like isoform
1 [Bombus terrestris]
gi|340709535|ref|XP_003393361.1| PREDICTED: ATP-dependent RNA helicase vasa, isoform A-like isoform
2 [Bombus terrestris]
Length = 642
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 41/116 (35%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 83 VPAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSS 139
+P KE+ D PS K N +E F KY+ + V+G + P + F
Sbjct: 155 MPHKPKERYIPPDLPSDEKALFNSGVEMGINF-DKYDFIGVKVTGEDPPQQIENF----E 209
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
G + L++N+ + GY +PTPIQ+ A+P++++ R+ ACA TGSGKT AF P++
Sbjct: 210 NIGLRAILVQNIQKSGYTKPTPIQKNALPIIMNGRDLMACAQTGSGKTAAFSIPII 265
>gi|297832726|ref|XP_002884245.1| DEAD/DEAH box helicase family protein [Arabidopsis lyrata subsp.
lyrata]
gi|297330085|gb|EFH60504.1| DEAD/DEAH box helicase family protein [Arabidopsis lyrata subsp.
lyrata]
Length = 504
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 50/87 (57%), Gaps = 6/87 (6%)
Query: 113 VFRKKYNIHVSG--ANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVL 170
+ R+K +IHV G A VP P+ TF + G LL NL GY PTPIQ QAIP
Sbjct: 89 LLRRKLDIHVQGQEATVPPPVLTF----ASCGLPPKLLLNLETAGYDFPTPIQMQAIPAA 144
Query: 171 LSDRECFACAPTGSGKTLAFLCPMLMK 197
LS A A TGSGKT +FL P++ +
Sbjct: 145 LSGNSLLASADTGSGKTASFLVPIISR 171
>gi|143361556|sp|Q5QMN3.2|RH20_ORYSJ RecName: Full=DEAD-box ATP-dependent RNA helicase 20
Length = 494
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G +VP P+R F + G Y+L+ + + G+ EPTPIQ Q P+ L
Sbjct: 73 YRRRREITVEGRDVPKPVREFRDV----GFPEYVLQEITKAGFVEPTPIQSQGWPMALRG 128
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 129 RDLIGIAETGSGKTLAYLLPAIVHV 153
>gi|354548000|emb|CCE44735.1| hypothetical protein CPAR2_405390 [Candida parapsilosis]
Length = 914
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
FG +LL N+++ GYK+PTPIQR++IP+++ +R+ A TGSGKT AF+ P++ KL+
Sbjct: 97 FGFSKFLLSNISKKGYKQPTPIQRKSIPLIIDNRDVVGMARTGSGKTAAFVLPLIEKLK 155
>gi|320589197|gb|EFX01659.1| dead deah box DNA helicase [Grosmannia clavigera kw1407]
Length = 734
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 42/105 (40%), Positives = 64/105 (60%), Gaps = 9/105 (8%)
Query: 100 AKKELNKQIERD-AVFRKKYNIHVSGANVPSPLRTFVK--LSSRFGCESYLLRNLAELGY 156
++K+L++ ERD +F++ + I G ++P P+R + + L R LL + +GY
Sbjct: 270 SEKKLDEMRERDWRIFKEDFGIATRGGSIPDPMRNWRESPLPPR------LLDVVEAVGY 323
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVL 201
EPTPIQR AIP+ L R+ A TGSGKT AFL P+L+ ++ L
Sbjct: 324 TEPTPIQRAAIPIALQGRDLIGVAVTGSGKTAAFLLPLLVYIKEL 368
>gi|293331893|ref|NP_001169380.1| uncharacterized protein LOC100383248 [Zea mays]
gi|224029005|gb|ACN33578.1| unknown [Zea mays]
Length = 498
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 54/88 (61%), Gaps = 4/88 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R+++ I V+G NVP+P+ +F G S +L+ + G+ PTPIQ Q+ P+ + +
Sbjct: 132 YRRRHEITVTGDNVPTPITSF----EAGGFPSEILKEIQRAGFASPTPIQAQSWPIAMQN 187
Query: 174 RECFACAPTGSGKTLAFLCPMLMKLRVL 201
++ A A TGSGKTL +L P M ++ L
Sbjct: 188 QDVVAIAKTGSGKTLGYLLPGFMHIKRL 215
>gi|302414752|ref|XP_003005208.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
gi|261356277|gb|EEY18705.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
albo-atrum VaMs.102]
Length = 1145
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG +VP P++ + + G L LA+LGY+ PT IQ QA+P L+S R+
Sbjct: 506 GIKVSGNDVPKPVQKWAQC----GLTRQTLDILADLGYERPTSIQMQALPCLMSGRDVIG 561
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM ++
Sbjct: 562 VAKTGSGKTMAFLLPMFRHIK 582
>gi|153830178|ref|ZP_01982845.1| ATP-dependent RNA helicase RhlE, partial [Vibrio cholerae 623-39]
gi|148874357|gb|EDL72492.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 623-39]
Length = 230
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|346540280|gb|AEO36953.1| vasa [Oreochromis aureus]
Length = 645
Score = 72.8 bits (177), Expect = 9e-11, Method: Composition-based stats.
Identities = 43/105 (40%), Positives = 64/105 (60%), Gaps = 8/105 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYN---IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAE 153
PS+ ++ + E F KY+ + VSG N P + TF + + CES L RN+++
Sbjct: 170 PSEDEESIFSHYESGVNF-DKYDEILVDVSGTNPPPAIMTFDEAAL---CES-LKRNVSK 224
Query: 154 LGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
GY +PTP+Q+ IP++ + R+ ACA TGSGKT AFL P+L +L
Sbjct: 225 SGYVKPTPVQKHGIPIISAGRDLMACAQTGSGKTAAFLLPILHQL 269
>gi|259909026|ref|YP_002649382.1| ATP-dependent RNA helicase RhlE [Erwinia pyrifoliae Ep1/96]
gi|387871953|ref|YP_005803329.1| ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM 12163]
gi|224964648|emb|CAX56162.1| Putative ATP-dependent RNA helicase [Erwinia pyrifoliae Ep1/96]
gi|283479042|emb|CAY74958.1| putative ATP-dependent RNA helicase rhlE [Erwinia pyrifoliae DSM
12163]
Length = 471
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L L
Sbjct: 6 LGLNADILRAVAEQGYNEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLLQLL 63
>gi|398394485|ref|XP_003850701.1| hypothetical protein MYCGRDRAFT_60826, partial [Zymoseptoria
tritici IPO323]
gi|339470580|gb|EGP85677.1| hypothetical protein MYCGRDRAFT_60826 [Zymoseptoria tritici IPO323]
Length = 640
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/125 (34%), Positives = 68/125 (54%), Gaps = 11/125 (8%)
Query: 79 SKQLVPAVDKEKEKVEDGPSK------AKKELNKQIERD-AVFRKKYNIHVSGANVPSPL 131
S++ ++ EK + E+G ++K L ERD +F++ +NI G +P+P+
Sbjct: 148 SRRAAEMLEMEKRRREEGGRNGIDKHWSEKRLEHMRERDWRIFKEDFNIATKGGAIPNPM 207
Query: 132 RTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFL 191
R++ G LL + + GY EP+ +QR AIP+ L R+ A TGSGKT AFL
Sbjct: 208 RSW----EESGLPKRLLDIVYDAGYVEPSAVQRAAIPIALQSRDLIGVAVTGSGKTAAFL 263
Query: 192 CPMLM 196
P+L+
Sbjct: 264 LPLLV 268
>gi|350536495|ref|NP_001233197.1| probable ATP-dependent RNA helicase DDX46 [Sus scrofa]
gi|336092215|gb|AEI00731.1| DEAD box polypeptide 46 [Sus scrofa]
Length = 1032
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 113 VFRKKY-NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
VFR + I V G P P+++ V+ G +L +L + GY++PTPIQ QAIP ++
Sbjct: 352 VFRLEMEGISVKGKGCPKPIKSGVQC----GISMKILNSLKKHGYEKPTPIQTQAIPAIM 407
Query: 172 SDRECFACAPTGSGKTLAFLCPM---LMKLRVL 201
S R+ A TGSGKT+AFL PM +M R L
Sbjct: 408 SGRDLMGIAKTGSGKTMAFLLPMFRHIMDQRSL 440
>gi|385787804|ref|YP_005818913.1| ATP-dependent RNA helicase RhlE [Erwinia sp. Ejp617]
gi|310767076|gb|ADP12026.1| ATP-dependent RNA helicase RhlE [Erwinia sp. Ejp617]
Length = 469
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L L
Sbjct: 6 LGLNADILRAVAEQGYNEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLLQLL 63
>gi|297841061|ref|XP_002888412.1| hypothetical protein ARALYDRAFT_315588 [Arabidopsis lyrata subsp.
lyrata]
gi|297334253|gb|EFH64671.1| hypothetical protein ARALYDRAFT_315588 [Arabidopsis lyrata subsp.
lyrata]
Length = 587
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
P ++ NKQ RD + RK+++I V+G ++P P++ F + +F +L L E G
Sbjct: 110 PLHIRRMSNKQ--RD-LIRKQWHIIVNGDDIPPPIKNFKDM--KF--PRPVLDTLKEKGI 162
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+PTPIQ Q +PV+L+ R+ A TGSGKTL F+ PM+M
Sbjct: 163 VQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIM 202
>gi|449549675|gb|EMD40640.1| hypothetical protein CERSUDRAFT_80293 [Ceriporiopsis subvermispora
B]
Length = 877
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/81 (41%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I + G + P P+ + S FG + L + +LGY PTPIQ QAIP ++S R+
Sbjct: 210 GIKIRGVDCPRPVTKW----SHFGLPASCLEVIKKLGYTAPTPIQAQAIPAIMSGRDVIG 265
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM ++
Sbjct: 266 VAKTGSGKTIAFLLPMFRHIK 286
>gi|380491708|emb|CCF35128.1| DEAD/DEAH box helicase [Colletotrichum higginsianum]
Length = 1206
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 49/80 (61%), Gaps = 4/80 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG N+P P++ + + G L LA++G+ +PT IQ QA+PV++S R+
Sbjct: 570 GIKVSGKNIPKPVQKWAQC----GLTRRTLDVLADMGFDKPTSIQMQALPVIMSGRDVVG 625
Query: 179 CAPTGSGKTLAFLCPMLMKL 198
A TGSGKTLAFL PM +
Sbjct: 626 VAKTGSGKTLAFLLPMFRHI 645
>gi|307204462|gb|EFN83169.1| ATP-dependent RNA helicase DDX42 [Harpegnathos saltator]
Length = 770
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 104 LNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQ 163
LNKQ + RK I VSG + P+P+ +F FG + L++ + + + +PTPIQ
Sbjct: 228 LNKQQVDN--LRKTLGIKVSGPSPPNPVTSF----GHFGFDDALMKAIRKNEFTQPTPIQ 281
Query: 164 RQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
QA+P L+ R+ A TGSGKT AF+ PML+ +
Sbjct: 282 AQAVPAALNGRDIIGIAKTGSGKTAAFIWPMLVHI 316
>gi|188534378|ref|YP_001908175.1| ATP-dependent RNA helicase RhlE [Erwinia tasmaniensis Et1/99]
gi|188029420|emb|CAO97297.1| Putative ATP-dependent RNA helicase [Erwinia tasmaniensis Et1/99]
Length = 468
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/58 (55%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G + +LR +AE GY EPTPIQRQAIPV+L+ R+ A A TG+GKT F P+L L
Sbjct: 6 LGLNADILRAVAEQGYNEPTPIQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLLQLL 63
>gi|224284362|gb|ACN39916.1| unknown [Picea sitchensis]
Length = 593
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/87 (41%), Positives = 51/87 (58%), Gaps = 4/87 (4%)
Query: 112 AVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLL 171
+ +RK+ I V G +VP PLR+F + S ++LR L G+ EPT IQ Q P+ L
Sbjct: 150 SAYRKRREITVEGRDVPKPLRSFREAS----FTDHVLRELERAGFSEPTAIQAQGWPMAL 205
Query: 172 SDRECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 206 KGRDLIGIAETGSGKTLAYLLPAIVHI 232
>gi|322799058|gb|EFZ20513.1| hypothetical protein SINV_09810 [Solenopsis invicta]
Length = 710
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 34/79 (43%), Positives = 51/79 (64%), Gaps = 4/79 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ V+G P +++F + G S LL N+ + GY +PTP+Q+ AIP+++S R+ AC
Sbjct: 258 VKVTGEGAPRQIQSF----DQSGLRSILLENIKKSGYTKPTPVQKYAIPIIMSGRDVMAC 313
Query: 180 APTGSGKTLAFLCPMLMKL 198
A TGSGKT AF+ P+L L
Sbjct: 314 AQTGSGKTAAFVLPILHSL 332
>gi|270011364|gb|EFA07812.1| hypothetical protein TcasGA2_TC005373 [Tribolium castaneum]
Length = 1007
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+ ++ G + L L +LG+++PTPIQ QAIP ++S R+
Sbjct: 336 IRVKGKGCPKPIKTW----AQCGVSTKELNILKKLGFEKPTPIQVQAIPAIMSGRDLIGI 391
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKTLAFL PM
Sbjct: 392 AKTGSGKTLAFLLPM 406
>gi|255079594|ref|XP_002503377.1| predicted protein [Micromonas sp. RCC299]
gi|226518643|gb|ACO64635.1| predicted protein [Micromonas sp. RCC299]
Length = 489
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/83 (43%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 115 RKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDR 174
R++ ++HV G + P+P+ F + G + L+ L +GY PTPIQ QAIP LL R
Sbjct: 36 RRRLDLHVLGVDPPNPVGRFGQCG---GLSAETLKILKRMGYASPTPIQSQAIPALLQGR 92
Query: 175 ECFACAPTGSGKTLAFLCPMLMK 197
+ A TGSGKT AFL P L+
Sbjct: 93 DVVGIAKTGSGKTAAFLLPALVH 115
>gi|118582049|sp|Q0UWA6.1|DED1_PHANO RecName: Full=ATP-dependent RNA helicase DED1
Length = 696
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 14/116 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E V + PSK + +N F K +I V SG VP P+ F
Sbjct: 159 PRVERELFGVPNDPSKQQTGIN--------FEKYDDIPVEASGQGVPEPVTRFTNPP--- 207
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMK 197
+ +LL N+ GYK PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L +
Sbjct: 208 -LDDHLLSNIELSGYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPILAQ 262
>gi|347841781|emb|CCD56353.1| similar to pre-mRNA-processing ATP-dependent RNA helicase PRP5
[Botryotinia fuckeliana]
Length = 1179
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I V+G +VP P++ + S+ G + L + +LGY+ PT IQ QAIP ++S R+
Sbjct: 541 GIKVAGKDVPKPVQKW----SQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIG 596
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM +R
Sbjct: 597 VAKTGSGKTIAFLLPMFRHIR 617
>gi|422922704|ref|ZP_16955883.1| DEAD/DEAH box helicase family protein [Vibrio cholerae BJG-01]
gi|341645192|gb|EGS69342.1| DEAD/DEAH box helicase family protein [Vibrio cholerae BJG-01]
Length = 398
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|183179390|ref|ZP_02957601.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
gi|183012801|gb|EDT88101.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-3]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|429887177|ref|ZP_19368702.1| ATP-dependent RNA helicase [Vibrio cholerae PS15]
gi|429225829|gb|EKY32027.1| ATP-dependent RNA helicase [Vibrio cholerae PS15]
Length = 398
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|229515773|ref|ZP_04405232.1| ATP-dependent RNA helicase [Vibrio cholerae TMA 21]
gi|229347542|gb|EEO12502.1| ATP-dependent RNA helicase [Vibrio cholerae TMA 21]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|114149265|sp|Q3MSQ8.1|DDX4_RANLE RecName: Full=Probable ATP-dependent RNA helicase DDX4; AltName:
Full=DEAD box protein 4; AltName: Full=Vasa homolog
gi|76253272|emb|CAH56439.1| DEAD box protein [Pelophylax lessonae]
Length = 724
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 55/81 (67%), Gaps = 4/81 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG++VP + TF + + C+S L +N+ + GY + TPIQ+ +IP++++ R+ AC
Sbjct: 274 VEVSGSDVPPAILTFEEANL---CDS-LAKNVCKSGYVKLTPIQKHSIPIIVAGRDLMAC 329
Query: 180 APTGSGKTLAFLCPMLMKLRV 200
A TGSGKT AFL P+L L V
Sbjct: 330 AQTGSGKTAAFLLPILAHLMV 350
>gi|346979464|gb|EGY22916.1| pre-mRNA-processing ATP-dependent RNA helicase PRP5 [Verticillium
dahliae VdLs.17]
Length = 1182
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 49/81 (60%), Gaps = 4/81 (4%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I VSG +VP P++ + + G L LA+LGY+ PT IQ QA+P L+S R+
Sbjct: 564 GIKVSGNDVPKPVQKWAQC----GLTRQTLDILADLGYERPTSIQMQALPCLMSGRDVIG 619
Query: 179 CAPTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM ++
Sbjct: 620 VAKTGSGKTMAFLLPMFRHIK 640
>gi|345482984|ref|XP_001603634.2| PREDICTED: probable ATP-dependent RNA helicase DDX46-like [Nasonia
vitripennis]
Length = 1039
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 48/76 (63%), Gaps = 4/76 (5%)
Query: 119 NIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFA 178
I V G N P P++++ ++ G L L +LGY++PTPIQ QAIP ++S R+
Sbjct: 361 GIRVKGKNCPKPIKSW----AQCGVSKKELDVLRKLGYEKPTPIQCQAIPAIMSGRDLIG 416
Query: 179 CAPTGSGKTLAFLCPM 194
A TGSGKT+AFL PM
Sbjct: 417 IAKTGSGKTIAFLLPM 432
>gi|297833410|ref|XP_002884587.1| hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp.
lyrata]
gi|297330427|gb|EFH60846.1| hypothetical protein ARALYDRAFT_477953 [Arabidopsis lyrata subsp.
lyrata]
Length = 1097
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 35/87 (40%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
++RK++ + +G N+P+P TF G +LR L G+ PTPIQ Q P+ L
Sbjct: 417 IYRKQHEVTTTGENIPAPYITF----ESSGLPPEILRELLSAGFPSPTPIQAQTWPIALQ 472
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + LR
Sbjct: 473 SRDIVAIAKTGSGKTLGYLIPAFILLR 499
>gi|254286146|ref|ZP_04961106.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae AM-19226]
gi|150423815|gb|EDN15756.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae AM-19226]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|153212702|ref|ZP_01948359.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 1587]
gi|124116352|gb|EAY35172.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 1587]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|419836253|ref|ZP_14359696.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-46B1]
gi|421342720|ref|ZP_15793125.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43B1]
gi|423735152|ref|ZP_17708360.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-41B1]
gi|424009084|ref|ZP_17752030.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-44C1]
gi|395943237|gb|EJH53912.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43B1]
gi|408630321|gb|EKL02932.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-41B1]
gi|408858118|gb|EKL97797.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-46B1]
gi|408864734|gb|EKM04152.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-44C1]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|387889903|ref|YP_006320201.1| ATP-dependent RNA helicase [Escherichia blattae DSM 4481]
gi|414592428|ref|ZP_11442078.1| ATP-dependent RNA helicase RhlE [Escherichia blattae NBRC 105725]
gi|386924736|gb|AFJ47690.1| ATP-dependent RNA helicase [Escherichia blattae DSM 4481]
gi|403196497|dbj|GAB79730.1| ATP-dependent RNA helicase RhlE [Escherichia blattae NBRC 105725]
Length = 455
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/58 (53%), Positives = 40/58 (68%)
Query: 141 FGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
G +LR +AE GY EPTP+QRQAIPV+L+ R+ A A TG+GKT F P+L +L
Sbjct: 6 LGLNPDILRAVAEAGYSEPTPVQRQAIPVVLAGRDLMASAQTGTGKTAGFTLPLLQRL 63
>gi|348685911|gb|EGZ25726.1| hypothetical protein PHYSODRAFT_486355 [Phytophthora sojae]
Length = 852
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/60 (51%), Positives = 42/60 (70%)
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G + R + +GYK PTPIQR+++P++LS ++C A A TGSGKT AFL PML KL+
Sbjct: 40 HLGLSPPVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLIPMLEKLK 99
>gi|254569806|ref|XP_002492013.1| RNA helicase in the DEAD-box family, involved in RNA isomerization
at the 5' splice site [Komagataella pastoris GS115]
gi|238031810|emb|CAY69733.1| RNA helicase in the DEAD-box family, involved in RNA isomerization
at the 5' splice site [Komagataella pastoris GS115]
gi|328351494|emb|CCA37893.1| ATP-dependent RNA helicase DDX23/PRP28 [Komagataella pastoris CBS
7435]
Length = 555
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 62/111 (55%), Gaps = 5/111 (4%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYL 147
++ +E +K +++ RD + ++ +NI G ++P+PLR + + +
Sbjct: 112 DQRNIEKDTHWRRKSISEMTLRDWRILKEDFNISSKGGDIPNPLRFW----GESNIKKEI 167
Query: 148 LRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
L + LG+ EPTPIQR +IP+ L+ R+ A TGSGKTLA++ P L L
Sbjct: 168 LDIVHSLGFDEPTPIQRASIPLALASRDLIGIAKTGSGKTLAYIIPALNYL 218
>gi|449495485|ref|XP_004159855.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 40-like [Cucumis
sativus]
Length = 1127
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 36/87 (41%), Positives = 49/87 (56%), Gaps = 4/87 (4%)
Query: 113 VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLS 172
V+R+++ + SG NVP+P TF G +LR + G+ PTPIQ Q P+ L
Sbjct: 445 VYRQQHEVTASGDNVPAPFMTF----EATGFPPEILREIYSAGFSSPTPIQAQTWPIALQ 500
Query: 173 DRECFACAPTGSGKTLAFLCPMLMKLR 199
R+ A A TGSGKTL +L P + LR
Sbjct: 501 GRDIVAIAKTGSGKTLGYLLPAFILLR 527
>gi|417820813|ref|ZP_12467427.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE39]
gi|423952578|ref|ZP_17734292.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|423982229|ref|ZP_17738074.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
gi|340038444|gb|EGQ99418.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE39]
gi|408660005|gb|EKL31036.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-40]
gi|408665229|gb|EKL36048.1| type III restriction enzyme, res subunit [Vibrio cholerae HE-46]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|15641418|ref|NP_231050.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121591273|ref|ZP_01678569.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121727543|ref|ZP_01680655.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V52]
gi|147674915|ref|YP_001216964.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|153817750|ref|ZP_01970417.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC 8457]
gi|153821347|ref|ZP_01974014.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae B33]
gi|227081578|ref|YP_002810129.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae M66-2]
gi|227117872|ref|YP_002819768.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|229505017|ref|ZP_04394527.1| ATP-dependent RNA helicase [Vibrio cholerae BX 330286]
gi|229511313|ref|ZP_04400792.1| ATP-dependent RNA helicase [Vibrio cholerae B33]
gi|229518431|ref|ZP_04407875.1| ATP-dependent RNA helicase [Vibrio cholerae RC9]
gi|229608021|ref|YP_002878669.1| ATP-dependent RNA helicase [Vibrio cholerae MJ-1236]
gi|254848525|ref|ZP_05237875.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MO10]
gi|255745787|ref|ZP_05419735.1| ATP-dependent RNA helicase [Vibrio cholera CIRS 101]
gi|262158933|ref|ZP_06030045.1| ATP-dependent RNA helicase [Vibrio cholerae INDRE 91/1]
gi|262169296|ref|ZP_06036988.1| ATP-dependent RNA helicase [Vibrio cholerae RC27]
gi|298498514|ref|ZP_07008321.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MAK 757]
gi|360035301|ref|YP_004937064.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|379741202|ref|YP_005333171.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae IEC224]
gi|417813420|ref|ZP_12460077.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-49A2]
gi|417816285|ref|ZP_12462917.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HCUF01]
gi|418332432|ref|ZP_12943366.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-06A1]
gi|418337176|ref|ZP_12946074.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-23A1]
gi|418343691|ref|ZP_12950475.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-28A1]
gi|418348844|ref|ZP_12953578.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43A1]
gi|418354675|ref|ZP_12957396.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A1]
gi|419825886|ref|ZP_14349390.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|421316168|ref|ZP_15766739.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1032(5)]
gi|421321010|ref|ZP_15771567.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1038(11)]
gi|421325005|ref|ZP_15775531.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1041(14)]
gi|421328665|ref|ZP_15779179.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1042(15)]
gi|421331689|ref|ZP_15782169.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1046(19)]
gi|421335261|ref|ZP_15785728.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1048(21)]
gi|421339154|ref|ZP_15789589.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-20A2]
gi|421347136|ref|ZP_15797518.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46A1]
gi|421351170|ref|ZP_15801535.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-25]
gi|422891511|ref|ZP_16933888.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-40A1]
gi|422902722|ref|ZP_16937717.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48A1]
gi|422906599|ref|ZP_16941429.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-70A1]
gi|422913183|ref|ZP_16947702.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HFU-02]
gi|422925663|ref|ZP_16958688.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-38A1]
gi|423144985|ref|ZP_17132594.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-19A1]
gi|423149664|ref|ZP_17136992.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-21A1]
gi|423153477|ref|ZP_17140671.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-22A1]
gi|423156291|ref|ZP_17143395.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-32A1]
gi|423160116|ref|ZP_17147084.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-33A2]
gi|423164838|ref|ZP_17151592.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48B2]
gi|423730969|ref|ZP_17704283.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A1]
gi|423756947|ref|ZP_17712305.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A2]
gi|423892657|ref|ZP_17726340.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62A1]
gi|423927434|ref|ZP_17730956.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-77A1]
gi|424001983|ref|ZP_17745069.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A2]
gi|424006141|ref|ZP_17749121.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-37A1]
gi|424024159|ref|ZP_17763819.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62B1]
gi|424027008|ref|ZP_17766621.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-69A1]
gi|424586282|ref|ZP_18025871.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1030(3)]
gi|424590898|ref|ZP_18030333.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1037(10)]
gi|424594984|ref|ZP_18034317.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1040(13)]
gi|424598849|ref|ZP_18038042.1| DEAD/DEAH box helicase family protein [Vibrio Cholerae CP1044(17)]
gi|424601586|ref|ZP_18040738.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1047(20)]
gi|424606581|ref|ZP_18045540.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1050(23)]
gi|424610409|ref|ZP_18049263.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-39A1]
gi|424613216|ref|ZP_18052019.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41A1]
gi|424617030|ref|ZP_18055717.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-42A1]
gi|424621981|ref|ZP_18060504.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-47A1]
gi|424644955|ref|ZP_18082703.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A2]
gi|424652635|ref|ZP_18090111.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A2]
gi|424656538|ref|ZP_18093836.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A2]
gi|440709660|ref|ZP_20890317.1| ATP-dependent RNA helicase [Vibrio cholerae 4260B]
gi|443503491|ref|ZP_21070470.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-64A1]
gi|443507392|ref|ZP_21074176.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-65A1]
gi|443511519|ref|ZP_21078174.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-67A1]
gi|443515074|ref|ZP_21081601.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-68A1]
gi|443518872|ref|ZP_21085282.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-71A1]
gi|443523762|ref|ZP_21089989.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-72A2]
gi|443531373|ref|ZP_21097388.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-7A1]
gi|443535149|ref|ZP_21101042.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-80A1]
gi|443538716|ref|ZP_21104571.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A1]
gi|449056110|ref|ZP_21734778.1| ATP-dependent RNA helicase [Vibrio cholerae O1 str. Inaba G4222]
gi|9655903|gb|AAF94564.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 biovar El Tor
str. N16961]
gi|121546878|gb|EAX57035.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121630127|gb|EAX62530.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V52]
gi|126511688|gb|EAZ74282.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae NCTC 8457]
gi|126521165|gb|EAZ78388.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae B33]
gi|146316798|gb|ABQ21337.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|227009466|gb|ACP05678.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae M66-2]
gi|227013322|gb|ACP09532.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O395]
gi|229345146|gb|EEO10120.1| ATP-dependent RNA helicase [Vibrio cholerae RC9]
gi|229351278|gb|EEO16219.1| ATP-dependent RNA helicase [Vibrio cholerae B33]
gi|229357240|gb|EEO22157.1| ATP-dependent RNA helicase [Vibrio cholerae BX 330286]
gi|229370676|gb|ACQ61099.1| ATP-dependent RNA helicase [Vibrio cholerae MJ-1236]
gi|254844230|gb|EET22644.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MO10]
gi|255736862|gb|EET92259.1| ATP-dependent RNA helicase [Vibrio cholera CIRS 101]
gi|262022109|gb|EEY40818.1| ATP-dependent RNA helicase [Vibrio cholerae RC27]
gi|262029118|gb|EEY47770.1| ATP-dependent RNA helicase [Vibrio cholerae INDRE 91/1]
gi|297542847|gb|EFH78897.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MAK 757]
gi|340042011|gb|EGR02977.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HCUF01]
gi|340042724|gb|EGR03689.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-49A2]
gi|341623276|gb|EGS48838.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48A1]
gi|341623497|gb|EGS49030.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-70A1]
gi|341624424|gb|EGS49921.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-40A1]
gi|341639620|gb|EGS64237.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HFU-02]
gi|341647245|gb|EGS71331.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-38A1]
gi|356419243|gb|EHH72801.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-06A1]
gi|356419329|gb|EHH72877.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-21A1]
gi|356424728|gb|EHH78127.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-19A1]
gi|356431693|gb|EHH84897.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-22A1]
gi|356432754|gb|EHH85951.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-23A1]
gi|356436105|gb|EHH89232.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-28A1]
gi|356441965|gb|EHH94841.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-32A1]
gi|356447583|gb|EHI00374.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-43A1]
gi|356448499|gb|EHI01266.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-33A2]
gi|356453077|gb|EHI05740.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-61A1]
gi|356454277|gb|EHI06926.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-48B2]
gi|356646455|gb|AET26510.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae O1 str.
2010EL-1786]
gi|378794712|gb|AFC58183.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae IEC224]
gi|395920675|gb|EJH31497.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1041(14)]
gi|395921125|gb|EJH31945.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1032(5)]
gi|395923992|gb|EJH34803.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1038(11)]
gi|395930171|gb|EJH40920.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1042(15)]
gi|395932953|gb|EJH43696.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1046(19)]
gi|395937122|gb|EJH47845.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1048(21)]
gi|395944102|gb|EJH54776.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-20A2]
gi|395946196|gb|EJH56860.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-46A1]
gi|395951615|gb|EJH62229.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-25]
gi|395960173|gb|EJH70554.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A2]
gi|395961352|gb|EJH71682.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A2]
gi|395964650|gb|EJH74853.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-42A1]
gi|395972076|gb|EJH81692.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-47A1]
gi|395975568|gb|EJH85055.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1030(3)]
gi|395977266|gb|EJH86681.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1047(20)]
gi|408008183|gb|EKG46193.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-39A1]
gi|408014375|gb|EKG52018.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-41A1]
gi|408033764|gb|EKG70289.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1037(10)]
gi|408034000|gb|EKG70511.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1040(13)]
gi|408043335|gb|EKG79334.1| DEAD/DEAH box helicase family protein [Vibrio Cholerae CP1044(17)]
gi|408044633|gb|EKG80531.1| DEAD/DEAH box helicase family protein [Vibrio cholerae CP1050(23)]
gi|408055276|gb|EKG90211.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A2]
gi|408609967|gb|EKK83343.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1033(6)]
gi|408625357|gb|EKK98270.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A1]
gi|408638092|gb|EKL10073.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-50A2]
gi|408656293|gb|EKL27390.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-77A1]
gi|408657569|gb|EKL28648.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62A1]
gi|408846890|gb|EKL86969.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-37A1]
gi|408848066|gb|EKL88121.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-17A2]
gi|408871524|gb|EKM10761.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-62B1]
gi|408879899|gb|EKM18842.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-69A1]
gi|439975249|gb|ELP51385.1| ATP-dependent RNA helicase [Vibrio cholerae 4260B]
gi|443432223|gb|ELS74754.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-64A1]
gi|443436425|gb|ELS82548.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-65A1]
gi|443439694|gb|ELS89392.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-67A1]
gi|443443716|gb|ELS97002.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-68A1]
gi|443447921|gb|ELT04563.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-71A1]
gi|443450313|gb|ELT10590.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-72A2]
gi|443458456|gb|ELT25852.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-7A1]
gi|443461764|gb|ELT32822.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-80A1]
gi|443466305|gb|ELT40964.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-81A1]
gi|448263933|gb|EMB01172.1| ATP-dependent RNA helicase [Vibrio cholerae O1 str. Inaba G4222]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|356526023|ref|XP_003531619.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 20-like [Glycine
max]
Length = 507
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 51/85 (60%), Gaps = 4/85 (4%)
Query: 114 FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSD 173
+R++ I V G ++P P++TF G Y+L+ + + G+ EPTPIQ Q P+ L
Sbjct: 83 YRQQREITVEGRDIPKPVKTF----HDAGFPEYVLQEITKAGFTEPTPIQSQGWPMALKG 138
Query: 174 RECFACAPTGSGKTLAFLCPMLMKL 198
R+ A TGSGKTLA+L P ++ +
Sbjct: 139 RDLIGIAETGSGKTLAYLLPAIVHV 163
>gi|262191718|ref|ZP_06049893.1| ATP-dependent RNA helicase [Vibrio cholerae CT 5369-93]
gi|262032413|gb|EEY50976.1| ATP-dependent RNA helicase [Vibrio cholerae CT 5369-93]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|229529522|ref|ZP_04418912.1| ATP-dependent RNA helicase [Vibrio cholerae 12129(1)]
gi|384424520|ref|YP_005633878.1| ATP-dependent RNA helicase VC1407 [Vibrio cholerae LMA3984-4]
gi|229333296|gb|EEN98782.1| ATP-dependent RNA helicase [Vibrio cholerae 12129(1)]
gi|327484073|gb|AEA78480.1| ATP-dependent RNA helicase VC1407 [Vibrio cholerae LMA3984-4]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|254225316|ref|ZP_04918928.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V51]
gi|125622157|gb|EAZ50479.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae V51]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|229523508|ref|ZP_04412913.1| ATP-dependent RNA helicase [Vibrio cholerae bv. albensis VL426]
gi|229337089|gb|EEO02106.1| ATP-dependent RNA helicase [Vibrio cholerae bv. albensis VL426]
Length = 396
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|297792439|ref|XP_002864104.1| hypothetical protein ARALYDRAFT_918160 [Arabidopsis lyrata subsp.
lyrata]
gi|297309939|gb|EFH40363.1| hypothetical protein ARALYDRAFT_918160 [Arabidopsis lyrata subsp.
lyrata]
Length = 587
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/100 (41%), Positives = 62/100 (62%), Gaps = 7/100 (7%)
Query: 97 PSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGY 156
P ++ NKQ RD + RK+++I V+G ++P P++ F + +F +L L E G
Sbjct: 110 PLHIRRMSNKQ--RD-LIRKQWHIIVNGDDIPPPIKNFKDM--KF--PRPVLDTLKEKGI 162
Query: 157 KEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLM 196
+PTPIQ Q +PV+L+ R+ A TGSGKTL F+ PM+M
Sbjct: 163 VQPTPIQVQGLPVILAGRDMIGIAFTGSGKTLVFVLPMIM 202
>gi|229521507|ref|ZP_04410926.1| ATP-dependent RNA helicase [Vibrio cholerae TM 11079-80]
gi|417824458|ref|ZP_12471049.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE48]
gi|419829955|ref|ZP_14353441.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|419832928|ref|ZP_14356390.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-61A2]
gi|421354161|ref|ZP_15804493.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-45]
gi|422307246|ref|ZP_16394411.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
gi|422917142|ref|ZP_16951470.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02A1]
gi|423819816|ref|ZP_17716074.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55C2]
gi|423853148|ref|ZP_17719866.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59A1]
gi|423880572|ref|ZP_17723468.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-60A1]
gi|423997559|ref|ZP_17740818.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02C1]
gi|424016266|ref|ZP_17756107.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55B2]
gi|424019207|ref|ZP_17759003.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59B1]
gi|424624749|ref|ZP_18063221.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A1]
gi|424629251|ref|ZP_18067548.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-51A1]
gi|424633282|ref|ZP_18071392.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-52A1]
gi|424636373|ref|ZP_18074388.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55A1]
gi|424640310|ref|ZP_18078200.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A1]
gi|424648344|ref|ZP_18086014.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A1]
gi|443527168|ref|ZP_21093233.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-78A1]
gi|229341605|gb|EEO06608.1| ATP-dependent RNA helicase [Vibrio cholerae TM 11079-80]
gi|340048143|gb|EGR09066.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE48]
gi|341638535|gb|EGS63182.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-02A1]
gi|395953286|gb|EJH63899.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HE-45]
gi|408014062|gb|EKG51743.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-50A1]
gi|408019673|gb|EKG57065.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-52A1]
gi|408024809|gb|EKG61897.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-56A1]
gi|408025337|gb|EKG62396.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-55A1]
gi|408034628|gb|EKG71119.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-57A1]
gi|408057083|gb|EKG91949.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-51A1]
gi|408621540|gb|EKK94543.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-1A2]
gi|408622563|gb|EKK95545.1| type III restriction enzyme, res subunit [Vibrio cholerae
CP1035(8)]
gi|408635749|gb|EKL07935.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55C2]
gi|408642909|gb|EKL14653.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-60A1]
gi|408643117|gb|EKL14856.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59A1]
gi|408651572|gb|EKL22828.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-61A2]
gi|408853491|gb|EKL93284.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-02C1]
gi|408861066|gb|EKM00665.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-55B2]
gi|408868702|gb|EKM08022.1| type III restriction enzyme, res subunit [Vibrio cholerae HC-59B1]
gi|443454574|gb|ELT18376.1| DEAD/DEAH box helicase family protein [Vibrio cholerae HC-78A1]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|336472551|gb|EGO60711.1| hypothetical protein NEUTE1DRAFT_76089 [Neurospora tetrasperma FGSC
2508]
gi|350294217|gb|EGZ75302.1| DEAD-domain-containing protein [Neurospora tetrasperma FGSC 2509]
Length = 693
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 44/114 (38%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E D PSK +N F K +I V SG NVP P+ TF S
Sbjct: 155 PRVERELFGTPDDPSKQHTGIN--------FEKYDDIPVEASGDNVPEPVLTF----SNP 202
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+++L+ N+ Y PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L
Sbjct: 203 PLDNHLISNIQLARYNVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPIL 256
>gi|154315049|ref|XP_001556848.1| hypothetical protein BC1G_04866 [Botryotinia fuckeliana B05.10]
gi|160419161|sp|A6RW79.1|PRP5_BOTFB RecName: Full=Pre-mRNA-processing ATP-dependent RNA helicase prp5
Length = 1151
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/80 (43%), Positives = 50/80 (62%), Gaps = 4/80 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V+G +VP P++ + S+ G + L + +LGY+ PT IQ QAIP ++S R+
Sbjct: 542 IKVAGKDVPKPVQKW----SQCGLDVKSLDVITKLGYERPTSIQMQAIPAIMSGRDVIGV 597
Query: 180 APTGSGKTLAFLCPMLMKLR 199
A TGSGKT+AFL PM +R
Sbjct: 598 AKTGSGKTIAFLLPMFRHIR 617
>gi|153826995|ref|ZP_01979662.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-2]
gi|149739156|gb|EDM53442.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae MZO-2]
Length = 397
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|317140423|gb|ADV03672.1| vasa-like protein [Gadus morhua]
Length = 354
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 53/88 (60%), Gaps = 4/88 (4%)
Query: 123 SGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPT 182
SG N P + TF + CES L RN+A+ GY +PTP+Q+ IP++ + R+ ACA T
Sbjct: 1 SGLNPPQAIYTFKEACL---CES-LERNVAKSGYVKPTPVQKHGIPIIAAGRDIMACAQT 56
Query: 183 GSGKTLAFLCPMLMKLRVLFIPFDYFCE 210
GSGKT AFL P+L KL + F E
Sbjct: 57 GSGKTAAFLLPILQKLMADGVAASSFSE 84
>gi|256860906|gb|ACV32355.1| vasa [Nibea mitsukurii]
Length = 640
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 39/92 (42%), Positives = 56/92 (60%), Gaps = 4/92 (4%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
+ VSG N P + TF + + CES L + +A+ GY +PTP+Q+ IP++ + R+ AC
Sbjct: 190 VDVSGTNAPQAIMTFEEATL---CES-LRKAVAKSGYVKPTPVQKHGIPIISAGRDLMAC 245
Query: 180 APTGSGKTLAFLCPMLMKLRVLFIPFDYFCEL 211
A TGSGKT AFL P+L +L + F EL
Sbjct: 246 AQTGSGKTAAFLLPILQQLMADGVAASSFSEL 277
>gi|307191879|gb|EFN75298.1| Probable ATP-dependent RNA helicase DDX5 [Harpegnathos saltator]
Length = 627
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/94 (37%), Positives = 54/94 (57%), Gaps = 4/94 (4%)
Query: 105 NKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQR 164
N+ E + FR+ I V G NVP+P++ F + + Y++ + GY +PTPIQ
Sbjct: 98 NRSKEEVSQFRENTEITVKGENVPNPIQYFEEGN----FPPYVMEGIRRQGYSQPTPIQA 153
Query: 165 QAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
Q P+ LS R+ A A TGSGKTL ++ P ++ +
Sbjct: 154 QGWPIALSGRDLVAIAQTGSGKTLGYILPAIVHI 187
>gi|320590131|gb|EFX02574.1| ATP dependent RNA helicase [Grosmannia clavigera kw1407]
Length = 713
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 43/114 (37%), Positives = 62/114 (54%), Gaps = 14/114 (12%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHV--SGANVPSPLRTFVKLSSRF 141
P V++E + D PSK +N F K +I V SG +VP P+ TF
Sbjct: 176 PRVERELFGLPDDPSKQHTGIN--------FEKYDDIPVEASGHDVPDPVLTFTNPP--- 224
Query: 142 GCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +L+ N+ YK PTP+Q+ +IP+++ R+ ACA TGSGKT FL P+L
Sbjct: 225 -LDDHLIHNIELAHYKVPTPVQKYSIPIVMGGRDLMACAQTGSGKTGGFLFPIL 277
>gi|301111750|ref|XP_002904954.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
gi|262095284|gb|EEY53336.1| DEAD/DEAH box RNA helicase, putative [Phytophthora infestans T30-4]
Length = 847
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/60 (50%), Positives = 42/60 (70%)
Query: 140 RFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLR 199
G + R + +GYK PTPIQR+++P++LS ++C A A TGSGKT AFL PM+ KL+
Sbjct: 40 HLGLSPLVFRGVMAMGYKVPTPIQRKSLPIVLSGKDCVAMARTGSGKTAAFLVPMVEKLK 99
>gi|357511395|ref|XP_003625986.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
gi|355501001|gb|AES82204.1| DEAD-box ATP-dependent RNA helicase [Medicago truncatula]
Length = 775
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 56/91 (61%), Gaps = 5/91 (5%)
Query: 109 ERDAV-FRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAI 167
E+D + +RK I VSG VP P++TF G ++ + + GY++PT IQ QA+
Sbjct: 207 EQDVIDYRKSLAIRVSGFEVPKPVKTF----EDCGFAPQIMGAIKKQGYEKPTSIQCQAL 262
Query: 168 PVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
PV+LS R+ A TGSGKT AF+ PM++ +
Sbjct: 263 PVVLSGRDIIGIAKTGSGKTAAFVLPMIVHI 293
>gi|256073063|ref|XP_002572852.1| DEAD box ATP-dependent RNA helicase [Schistosoma mansoni]
gi|350646414|emb|CCD58911.1| DEAD box ATP-dependent RNA helicase, putative [Schistosoma mansoni]
Length = 769
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 42/110 (38%), Positives = 66/110 (60%), Gaps = 8/110 (7%)
Query: 89 EKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLL 148
EK+ ++ P A + + E +A FRKKY + +SG +VP P+ +F +L+ Y+L
Sbjct: 53 EKKFYQEHPLSASRS---EAEVEA-FRKKYKMSLSGRDVPRPVLSFNELN----VPDYIL 104
Query: 149 RNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
+A+ G++ PTPIQ Q P+ LS R+ A TGSGKT +FL P ++ +
Sbjct: 105 SVIAKNGWQLPTPIQSQGWPMALSGRDVVGIAQTGSGKTASFLLPAVIHI 154
>gi|297578974|ref|ZP_06940902.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC385]
gi|297536568|gb|EFH75401.1| ATP-dependent RNA helicase RhlE [Vibrio cholerae RC385]
Length = 398
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
>gi|156095474|ref|XP_001613772.1| pre-mRNA splicing factor RNA helicase PRP28 [Plasmodium vivax
Sal-1]
gi|148802646|gb|EDL44045.1| pre-mRNA splicing factor RNA helicase PRP28, putative [Plasmodium
vivax]
Length = 1006
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 64/109 (58%), Gaps = 6/109 (5%)
Query: 100 AKKELNKQIERDA-VFRKKYNIHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKE 158
++K+ + +RD +FR+ I++ G VP P+R + + + S LL+ + + Y++
Sbjct: 548 SEKKREEMTDRDWRIFREDNEIYIKGGIVPPPIRRWEESN----LSSDLLKAIKKAKYEK 603
Query: 159 PTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKLRVLFIPFDY 207
PTPIQ QAIP+ L R+ A TGSGKT AF+ PML ++ L P Y
Sbjct: 604 PTPIQMQAIPIALEMRDLIGIAETGSGKTAAFVLPMLAYVKQL-PPLTY 651
>gi|189240548|ref|XP_973126.2| PREDICTED: similar to DEAD box ATP-dependent RNA helicase
[Tribolium castaneum]
Length = 984
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 48/75 (64%), Gaps = 4/75 (5%)
Query: 120 IHVSGANVPSPLRTFVKLSSRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFAC 179
I V G P P++T+ ++ G + L L +LG+++PTPIQ QAIP ++S R+
Sbjct: 313 IRVKGKGCPKPIKTW----AQCGVSTKELNILKKLGFEKPTPIQVQAIPAIMSGRDLIGI 368
Query: 180 APTGSGKTLAFLCPM 194
A TGSGKTLAFL PM
Sbjct: 369 AKTGSGKTLAFLLPM 383
>gi|242808610|ref|XP_002485202.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces stipitatus
ATCC 10500]
gi|218715827|gb|EED15249.1| ATP dependent RNA helicase (Dbp1), putative [Talaromyces stipitatus
ATCC 10500]
Length = 680
Score = 72.4 bits (176), Expect = 1e-10, Method: Composition-based stats.
Identities = 40/112 (35%), Positives = 61/112 (54%), Gaps = 10/112 (8%)
Query: 84 PAVDKEKEKVEDGPSKAKKELNKQIERDAVFRKKYNIHVSGANVPSPLRTFVKLSSRFGC 143
P +++E V + PSK + +N D + SG NVP P+ TF
Sbjct: 147 PRLERELFGVPNDPSKQQTGINFANYDDI------PVEASGQNVPEPVNTFTNPP----L 196
Query: 144 ESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPML 195
+ +L+ N+A Y PTP+Q+ +IP++++ R+ ACA TGSGKT FL P+L
Sbjct: 197 DDHLIANIALARYTTPTPVQKYSIPIVMNGRDLMACAQTGSGKTGGFLFPIL 248
>gi|126323567|ref|XP_001370574.1| PREDICTED: probable ATP-dependent RNA helicase DDX49 [Monodelphis
domestica]
Length = 491
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
++ G S+L+ +LG K PTP+Q+ +P +L R+C CA TGSGKT AF+ P+L KL
Sbjct: 5 AKLGLASWLVAQCRQLGLKHPTPVQQNCVPAILEGRDCMGCAKTGSGKTAAFVLPILQKL 64
Query: 199 RVLFIPFDYFC 209
PF FC
Sbjct: 65 SE--DPFGIFC 73
>gi|121591566|ref|ZP_01678824.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
gi|121546580|gb|EAX56777.1| putative ATP-dependent RNA helicase RhlE [Vibrio cholerae 2740-80]
Length = 147
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/61 (50%), Positives = 44/61 (72%)
Query: 139 SRFGCESYLLRNLAELGYKEPTPIQRQAIPVLLSDRECFACAPTGSGKTLAFLCPMLMKL 198
S+ G L++ +A+LGY++PT IQ QAIPV+L R+ A A TG+GKT +F+ P+L KL
Sbjct: 4 SQLGLSDVLVQTVAQLGYQKPTHIQTQAIPVILQGRDLIAAAQTGTGKTASFVLPILEKL 63
Query: 199 R 199
R
Sbjct: 64 R 64
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.389
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,195,157,543
Number of Sequences: 23463169
Number of extensions: 129937700
Number of successful extensions: 474808
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 21526
Number of HSP's successfully gapped in prelim test: 2162
Number of HSP's that attempted gapping in prelim test: 448752
Number of HSP's gapped (non-prelim): 25090
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)