BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028269
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q54YW1|ELMOA_DICDI ELMO domain-containing protein A OS=Dictyostelium discoideum
GN=elmoA PE=1 SV=1
Length = 977
Score = 114 bits (284), Expect = 7e-25, Method: Composition-based stats.
Identities = 67/214 (31%), Positives = 102/214 (47%), Gaps = 27/214 (12%)
Query: 10 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 69
Q Q + R +V ++ EH L LW+ +P +L +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421
Query: 70 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFML---IQML 126
DFR G L+NL+Y A+N+ + F+ ++ Q DR EYP A AG+ +TF L I +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 480
Query: 127 DLEAVKPRTMVGAT---------------FLKFLSENESAFDLLYCITFKLMDHQWLAMR 171
+ P + F + AF+ +YC TF+++D W M
Sbjct: 481 GTPNLNPYNSTTSNTTSNTTSTTNIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 540
Query: 172 ASYMDFNTVMKSTRRQLERELLLEDVTRLEDLPS 205
+YM F +M S + + +T LE P+
Sbjct: 541 GTYMHFQKIMSSVKNLI--------ITALESKPT 566
>sp|Q54RS7|ELMOC_DICDI ELMO domain-containing protein C OS=Dictyostelium discoideum
GN=elmoC PE=4 SV=1
Length = 618
Score = 106 bits (264), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 64/188 (34%), Positives = 103/188 (54%), Gaps = 16/188 (8%)
Query: 10 QEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPST 69
Q + ++ L + Y+S+ P+H E L+ LW+ +P++E + S WK+ G+Q DP+
Sbjct: 361 QSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSDDPTR 419
Query: 70 DFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNIT---FMLIQML 126
DFRG G + L NL++L ++ Q++L + DR +YPFAVAG+NI+ F + Q+
Sbjct: 420 DFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEVFQIS 473
Query: 127 DLEAVKPRTMVG------ATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTV 180
+ +P A N+ AF+ LY + F L+DH W+ M A+YM F V
Sbjct: 474 EDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMMFPLV 533
Query: 181 MKSTRRQL 188
+K + QL
Sbjct: 534 IKKLKSQL 541
>sp|Q54UP9|ELMOD_DICDI Ankyrin repeat and ELMO domain-containing protein D
OS=Dictyostelium discoideum GN=elmoD PE=4 SV=1
Length = 1267
Score = 94.7 bits (234), Expect = 4e-19, Method: Composition-based stats.
Identities = 54/176 (30%), Positives = 92/176 (52%), Gaps = 16/176 (9%)
Query: 14 LQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRG 73
+Q L + Y+ P H+ L LW+ FP++ + E W+ +G+Q KDPS+DFRG
Sbjct: 290 IQGLIMDSKTPYNKDEPSHQRLLETLWSTLFPNQVFQR-SHENWQIIGFQNKDPSSDFRG 348
Query: 74 GGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKP 133
G L++L+YLA+N F + L ++ + + YP+A +G+ +T L+ E VKP
Sbjct: 349 MGLAGLKHLIYLAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKP 401
Query: 134 -------RTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 182
++G + L E+E+A + +YC+ ++ W A+YM F V +
Sbjct: 402 INISANHSDVIGQIY-PILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456
>sp|Q54VR8|ELMOB_DICDI ELMO domain-containing protein B OS=Dictyostelium discoideum
GN=elmoB PE=4 SV=1
Length = 284
Score = 93.2 bits (230), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 21/166 (12%)
Query: 23 VAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENL 82
+ YD++ EH +L LW A PD +S++W +G+QG DP+TDFRG G + L+NL
Sbjct: 116 IPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGMGILGLDNL 175
Query: 83 LYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMV----- 137
+Y + + +++L+ S YPFA+ G+NIT +++ ++D KP +
Sbjct: 176 IYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----KPHFKIYFFKN 228
Query: 138 GATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMK 182
G+T +F NE LY + F D + + + S M+FNT+ K
Sbjct: 229 GSTLTQF---NE-----LYSLVFISFDRFYQSKKPKSIMEFNTIKK 266
>sp|Q8IZ81|ELMD2_HUMAN ELMO domain-containing protein 2 OS=Homo sapiens GN=ELMOD2 PE=1
SV=1
Length = 293
Score = 92.8 bits (229), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/137 (37%), Positives = 74/137 (54%), Gaps = 12/137 (8%)
Query: 6 FWCCQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAAFPDEELRDLISE 55
F C + CL ++ QL +DV YDS +H E L LWN P ++L IS+
Sbjct: 91 FKICMKMCLLQITGYKQLYLDVESVRKRPYDSDNLQHEELLMKLWNLLMPTKKLNARISK 150
Query: 56 QWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAG 115
QW E+G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G
Sbjct: 151 QWAEIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSR--SNHPKLGYSYAIVG 208
Query: 116 VNITFMLIQMLDLEAVK 132
+N+T M +L EA+K
Sbjct: 209 INLTEMAYSLLKSEALK 225
>sp|Q08DZ3|ELMD2_BOVIN ELMO domain-containing protein 2 OS=Bos taurus GN=ELMOD2 PE=1 SV=1
Length = 293
Score = 90.9 bits (224), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 63/204 (30%), Positives = 98/204 (48%), Gaps = 17/204 (8%)
Query: 6 FWCCQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAAFPDEELRDLISE 55
F C + CL ++ QL +DV YDS +H + L LWN P ++L+ IS+
Sbjct: 91 FKICMKACLLQISGYKQLYLDVESVRKKPYDSDNLQHEKLLIKLWNLLMPTKKLKARISK 150
Query: 56 QWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAG 115
QW ++G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G
Sbjct: 151 QWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPK--LGYSYAIVG 208
Query: 116 VNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SY 174
+N+T M +L EA+K F+ + E F YC D W + S
Sbjct: 209 INLTEMAYSLLKSEALKFHLY---NFVPGIPTMEH-FHQFYCYLVYEFDKFWFEEKPESI 264
Query: 175 MDFNTVMKSTRRQLERELLLEDVT 198
M FN + +++ LL +V+
Sbjct: 265 MYFNVYREKFHEKIKGLLLDCNVS 288
>sp|Q499U2|ELMO3_RAT Engulfment and cell motility protein 3 OS=Rattus norvegicus
GN=Elmo3 PE=2 SV=1
Length = 720
Score = 90.5 bits (223), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 57/207 (27%), Positives = 99/207 (47%), Gaps = 15/207 (7%)
Query: 5 HFWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF-PDEEL----------RDLI 53
H + Q L L+ R+ D E RE L+AL AAF PD E R L
Sbjct: 281 HLYVLQALTLGLLEPRMRTPLDPYSQEQREQLQALRQAAFEPDGESLGTGLSADRRRSLC 340
Query: 54 SEQWKEMGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPF 111
+++++G+ P+ D G ++L+N+LY +R+ P ++ + + E PF
Sbjct: 341 VREFRKLGFSNSSPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPF 400
Query: 112 AVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 171
A + + +T +L ++L + +P + F + +F L+C+ +L++ W MR
Sbjct: 401 ARSSIQLTVLLCELLHVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMR 458
Query: 172 ASYMDFNTVMKSTRRQLERELLLEDVT 198
A+ DF+ VM+ R QL R L L+ +
Sbjct: 459 ATQEDFDKVMQVVREQLARTLALKPTS 485
>sp|A6QR40|ELMO3_BOVIN Engulfment and cell motility protein 3 OS=Bos taurus GN=ELMO3 PE=2
SV=1
Length = 652
Score = 88.2 bits (217), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 56/204 (27%), Positives = 99/204 (48%), Gaps = 15/204 (7%)
Query: 5 HFWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLI 53
H + Q L L+ R+ D E RE L+AL AAF P+ E R L
Sbjct: 281 HLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQALRQAAFEPEGESVGAGLSADRRRSLC 340
Query: 54 SEQWKEMGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPF 111
+ +++++G+ +P+ D G ++L+N+LY +R P ++ + + E PF
Sbjct: 341 AREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRQAPSAYSRFVLENSSREDKHECPF 400
Query: 112 AVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 171
A + + +T +L +L + +P + F + +F L+C++ +L++ W MR
Sbjct: 401 ARSSIQLTVLLCDLLHVG--EPCSETAQDFSPMFFGQDQSFHELFCVSIQLLNKTWKEMR 458
Query: 172 ASYMDFNTVMKSTRRQLERELLLE 195
A+ DF+ VM+ R QL R L L+
Sbjct: 459 ATQEDFDKVMQVVREQLARTLALK 482
>sp|Q96BJ8|ELMO3_HUMAN Engulfment and cell motility protein 3 OS=Homo sapiens GN=ELMO3
PE=2 SV=3
Length = 720
Score = 88.2 bits (217), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 97/207 (46%), Gaps = 15/207 (7%)
Query: 5 HFWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDE-----------ELRDLI 53
H + Q L L+ R+ D E RE L+ L AAF E R L
Sbjct: 281 HLYVLQALMLGLLEPRMRTPLDPYSQEQREQLQVLRQAAFEVEGESSGAGLSADRRRSLC 340
Query: 54 SEQWKEMGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPF 111
+ +++++G+ +P+ D G ++L+N+LY +RN P ++ + + E PF
Sbjct: 341 AREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRNAPSAYSRFVLENSSREDKHECPF 400
Query: 112 AVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 171
A + +T +L ++L + +P + F + +F L+C+ +L++ W MR
Sbjct: 401 ARGSIQLTVLLCELLRVG--EPCSETAQDFSPMFFGQDQSFHELFCVGIQLLNKTWKEMR 458
Query: 172 ASYMDFNTVMKSTRRQLERELLLEDVT 198
A+ DF+ VM+ R QL R L L+ +
Sbjct: 459 ATQEDFDKVMQVVREQLARTLALKPTS 485
>sp|Q8BGF6|ELMD2_MOUSE ELMO domain-containing protein 2 OS=Mus musculus GN=Elmod2 PE=2
SV=1
Length = 293
Score = 87.8 bits (216), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 6 FWCCQEECLQRL----QLRIDV------AYDSSIPEHREALRALWNAAFPDEELRDLISE 55
F C CL ++ QL DV YDS+ +H + L LW+ P ++L IS+
Sbjct: 91 FQICMRTCLLQITGYKQLYHDVENVRKKPYDSANAQHEKMLLKLWSLLMPTKKLTARISK 150
Query: 56 QWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAG 115
QW ++G+QG DP TDFRG G + L NL+Y + N+ +L + + Y +A+ G
Sbjct: 151 QWADIGFQGDDPKTDFRGMGILGLINLVYFSENYTSEAHQILSRSNHPK--LGYSYAIVG 208
Query: 116 VNITFMLIQMLDLEAVK 132
+N+T M +L EA+K
Sbjct: 209 INLTEMAYSLLKSEALK 225
>sp|Q8BYZ7|ELMO3_MOUSE Engulfment and cell motility protein 3 OS=Mus musculus GN=Elmo3
PE=1 SV=2
Length = 720
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 55/207 (26%), Positives = 100/207 (48%), Gaps = 15/207 (7%)
Query: 5 HFWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAF-PDEE----------LRDLI 53
H + Q L L+ R+ D E R+ L+AL AAF P+ E R L
Sbjct: 281 HLYVLQALTLGLLEPRMRTPLDPYSQEQRDQLQALRQAAFEPEGESLGTGLSADRRRSLC 340
Query: 54 SEQWKEMGWQGKDPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGDRSVWEYPF 111
+++++G+ +P+ D G ++L+N+LY +R+ P ++ + + E PF
Sbjct: 341 VREFRKLGFSNSNPAQDLERVPPGLLALDNMLYFSRHAPSAYSRFVLENSSREDKHECPF 400
Query: 112 AVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMR 171
A + + +T +L ++L + +P + F + +F L+C+ +L++ W MR
Sbjct: 401 ARSSIQLTALLCELLRVG--EPCSETAQDFSPMFFSQDHSFHELFCVAIQLLNKTWKEMR 458
Query: 172 ASYMDFNTVMKSTRRQLERELLLEDVT 198
A+ DF+ VM+ R QL R L L+ +
Sbjct: 459 ATQEDFDKVMQVVREQLARTLALKPTS 485
>sp|Q0IIE6|ELMD1_BOVIN ELMO domain-containing protein 1 OS=Bos taurus GN=ELMOD1 PE=2 SV=1
Length = 326
Score = 81.6 bits (200), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 59/191 (30%), Positives = 87/191 (45%), Gaps = 20/191 (10%)
Query: 24 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 83
+YDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL
Sbjct: 126 SYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQ 185
Query: 84 YLARNFPKSFQDLL------RKQEGDRSVWE---------YPFAVAGVNITFMLIQMLDL 128
Y A + Q +L + + ++ WE Y FA+ G+NIT + +L
Sbjct: 186 YFAERDAAAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVS 245
Query: 129 EAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQ 187
A+K A LS F +C W+ M+FN V + R++
Sbjct: 246 GALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRKR 301
Query: 188 LERELLLEDVT 198
+ ++L D+
Sbjct: 302 IIKQLQNPDMA 312
>sp|Q5NVD7|ELMD1_PONAB ELMO domain-containing protein 1 OS=Pongo abelii GN=ELMOD1 PE=2
SV=1
Length = 326
Score = 81.3 bits (199), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 86/190 (45%), Gaps = 20/190 (10%)
Query: 25 YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 84
YDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186
Query: 85 LARNFPKSFQDLL------RKQEGDRSVWE---------YPFAVAGVNITFMLIQMLDLE 129
A + Q +L + + ++ WE Y FA+ G+NIT + +L
Sbjct: 187 FAERDATAAQQVLSDSLHPKCSKFSKAEWEKKRMDKAIGYSFAIVGINITDLAYNLLVSG 246
Query: 130 AVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQL 188
A+K A LS F +C W+ M+FN V + R+++
Sbjct: 247 ALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRKRI 302
Query: 189 ERELLLEDVT 198
++L D+
Sbjct: 303 IKQLQNPDMA 312
>sp|Q3V1U8|ELMD1_MOUSE ELMO domain-containing protein 1 OS=Mus musculus GN=Elmod1 PE=2
SV=2
Length = 326
Score = 79.7 bits (195), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/191 (30%), Positives = 86/191 (45%), Gaps = 22/191 (11%)
Query: 25 YDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLY 84
YDS P+H E L LW P+ L +S+QW E+G+QG DP TDFRG G + L NL Y
Sbjct: 127 YDSDNPQHEEMLLKLWELLKPNTPLESRVSKQWCEIGFQGDDPKTDFRGMGLLGLYNLQY 186
Query: 85 LARNFPKSFQDLL----------------RKQEGDRSVWEYPFAVAGVNITFMLIQMLDL 128
A Q +L K++ D+++ Y FA+ G+NIT + +L
Sbjct: 187 FAERDATVAQQVLSDSVHPKCSKFSKIEWEKKKMDKAIG-YSFAIVGINITDLAYNLLVS 245
Query: 129 EAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFNTVMKSTRRQ 187
A+K A LS F +C W+ M+FN V + R++
Sbjct: 246 GALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDIMEFNRVREKFRKR 301
Query: 188 LERELLLEDVT 198
+ ++L D+
Sbjct: 302 IIKQLQNPDMA 312
>sp|Q8N336|ELMD1_HUMAN ELMO domain-containing protein 1 OS=Homo sapiens GN=ELMOD1 PE=2
SV=3
Length = 334
Score = 79.3 bits (194), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 60/200 (30%), Positives = 87/200 (43%), Gaps = 30/200 (15%)
Query: 24 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 83
AYDS P+H E L LW P+ L IS+QW E+G+QG DP TDFRG G + L NL
Sbjct: 126 AYDSDNPQHEEMLLKLWKFLKPNTPLESRISKQWCEIGFQGDDPKTDFRGMGLLGLYNLQ 185
Query: 84 YLARNFPKSFQDLL------------------------RKQEGDRSVWEYPFAVAGVNIT 119
Y A + Q +L K+ D+++ Y FA+ G+NIT
Sbjct: 186 YFAERDATAAQQVLSDSLHPKCRDITKEEISKFSKAEWEKKRMDKAIG-YSFAIVGINIT 244
Query: 120 FMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRA-SYMDFN 178
+ +L A+K A LS F +C W+ M+FN
Sbjct: 245 DLAYNLLVSGALKTHFYNIAPEAPTLSH----FQQTFCYLMHEFHKFWIEEDPMDIMEFN 300
Query: 179 TVMKSTRRQLERELLLEDVT 198
V + R+++ ++L D+
Sbjct: 301 RVREKFRKRIIKQLQNPDMA 320
>sp|Q92556|ELMO1_HUMAN Engulfment and cell motility protein 1 OS=Homo sapiens GN=ELMO1
PE=1 SV=2
Length = 727
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 41 NAAFPDEELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLL 97
N++ E+ + + + +K++G+ +P+ DF G ++L+N+LY A++ ++ ++
Sbjct: 340 NSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIV 399
Query: 98 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYC 157
+ E PF + + +T ML ++L + + T F ++ +F+ +C
Sbjct: 400 LENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETC--NDFHPMFFTHDRSFEEFFC 457
Query: 158 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 192
I +L++ W MRA+ DFN VM+ + Q+ R L
Sbjct: 458 ICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRAL 492
>sp|Q8BPU7|ELMO1_MOUSE Engulfment and cell motility protein 1 OS=Mus musculus GN=Elmo1
PE=1 SV=2
Length = 727
Score = 65.1 bits (157), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/155 (24%), Positives = 80/155 (51%), Gaps = 5/155 (3%)
Query: 41 NAAFPDEELRDLISEQWKEMGWQGK-DPSTDFRGG--GFISLENLLYLARNFPKSFQDLL 97
N++ E+ + + + +K++G+ +P+ DF G ++L+N+LY A++ ++ ++
Sbjct: 340 NSSGSMEKRKSMYTRDYKKLGFINHVNPAMDFTQTPPGMLALDNMLYFAKHHQDAYIRIV 399
Query: 98 RKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYC 157
+ E PF + + +T ML ++L + + T F ++ +F+ +C
Sbjct: 400 LENSSREDKHECPFGRSSIELTKMLCEILKVGELPSETC--NDFHPMFFTHDRSFEEFFC 457
Query: 158 ITFKLMDHQWLAMRASYMDFNTVMKSTRRQLEREL 192
I +L++ W MRA+ DFN VM+ + Q+ R L
Sbjct: 458 ICIQLLNKTWKEMRATSEDFNKVMQVVKEQVMRAL 492
>sp|A4FUD6|ELMO2_BOVIN Engulfment and cell motility protein 2 OS=Bos taurus GN=ELMO2 PE=2
SV=1
Length = 720
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 47 EELRDLISEQWKEMGWQGK-DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGD 103
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 104 RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 163
E PF + + +T ML ++L + + P F + ++ AF+ L+ I +L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLL 456
Query: 164 DHQWLAMRASYMDFNTVMKSTRRQLEREL 192
+ W MRA+ DFN VM+ R Q+ R L
Sbjct: 457 NKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q96JJ3|ELMO2_HUMAN Engulfment and cell motility protein 2 OS=Homo sapiens GN=ELMO2
PE=1 SV=2
Length = 720
Score = 61.6 bits (148), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 47 EELRDLISEQWKEMGWQGK-DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGD 103
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 104 RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 163
E PF + + +T ML ++L + + P F + ++ AF+ L+ I +L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLL 456
Query: 164 DHQWLAMRASYMDFNTVMKSTRRQLEREL 192
+ W MRA+ DFN VM+ R Q+ R L
Sbjct: 457 NKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q5RCC1|ELMO2_PONAB Engulfment and cell motility protein 2 OS=Pongo abelii GN=ELMO2
PE=2 SV=1
Length = 720
Score = 61.2 bits (147), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 47 EELRDLISEQWKEMGWQGK-DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGD 103
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 339 EKRKAMYTKDYKMLGFTNHINPAMDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 398
Query: 104 RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 163
E PF + + +T ML ++L + + P F + ++ AF+ L+ I +L+
Sbjct: 399 EDKHECPFGRSAIELTKMLCEILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLL 456
Query: 164 DHQWLAMRASYMDFNTVMKSTRRQLEREL 192
+ W MRA+ DFN VM+ R Q+ R L
Sbjct: 457 NKTWKEMRATAEDFNKVMQVVREQITRAL 485
>sp|Q8BHL5|ELMO2_MOUSE Engulfment and cell motility protein 2 OS=Mus musculus GN=Elmo2
PE=1 SV=1
Length = 732
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 78/149 (52%), Gaps = 5/149 (3%)
Query: 47 EELRDLISEQWKEMGWQGK-DPSTDFR--GGGFISLENLLYLARNFPKSFQDLLRKQEGD 103
E+ + + ++ +K +G+ +P+ DF G ++L+N+LYLA+ ++ ++ +
Sbjct: 351 EKRKAMYTKDYKMLGFTNHINPALDFTQTPPGMLALDNMLYLAKVHQDTYIRIVLENSSR 410
Query: 104 RSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLM 163
E PF + + +T ML ++L + + P F + ++ AF+ L+ I +L+
Sbjct: 411 EDKHECPFGRSAIELTKMLCEILQVGEL-PNEGRNDYHPMFFT-HDRAFEELFGICIQLL 468
Query: 164 DHQWLAMRASYMDFNTVMKSTRRQLEREL 192
+ W MRA+ DFN VM+ R Q+ R L
Sbjct: 469 NKTWKEMRATAEDFNKVMQVVREQITRAL 497
>sp|Q96FG2|ELMD3_HUMAN ELMO domain-containing protein 3 OS=Homo sapiens GN=ELMOD3 PE=2
SV=2
Length = 381
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/160 (27%), Positives = 74/160 (46%), Gaps = 13/160 (8%)
Query: 26 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 85
DS P H L+ ++ + L W+++G+QG +P+TD RG GF++L +LLYL
Sbjct: 165 DSQDPVHGRVLQTIYKKLTGSKFDCALHGNHWEDLGFQGANPATDLRGAGFLALLHLLYL 224
Query: 86 ---ARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFL 142
++ P + Q++ R + ++PF + VNIT + IQ L E + +
Sbjct: 225 VMDSKTLPMA-QEIFRLSR--HHIQQFPFCLMSVNITHIAIQALREECLSRECNRQQKVI 281
Query: 143 KFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 182
++ Y TF + H W R + D V+K
Sbjct: 282 PVVNS-------FYAATFLHLAHVWRTQRKTISDSGFVLK 314
>sp|Q91YP6|ELMD3_MOUSE ELMO domain-containing protein 3 OS=Mus musculus GN=Elmod3 PE=2
SV=1
Length = 381
Score = 51.2 bits (121), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 43/162 (26%), Positives = 75/162 (46%), Gaps = 13/162 (8%)
Query: 24 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 83
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF++L +LL
Sbjct: 163 GLDSQNPTHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGANPATDLRGAGFLALLHLL 222
Query: 84 YLARNFPKSF---QDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGAT 140
YL + K+F Q++ R + ++PF + VNIT + IQ L E +
Sbjct: 223 YLVMD-SKTFLMAQEIFRLSH--HHIQQFPFCLMSVNITRIAIQALREECLSRECNRRQK 279
Query: 141 FLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 182
+ ++ Y TF + W + + +D V+K
Sbjct: 280 VIPVVNS-------FYAATFLHLARVWRTQQKTILDSGFVLK 314
>sp|Q58DT5|ELMD3_BOVIN ELMO domain-containing protein 3 OS=Bos taurus GN=ELMOD3 PE=2 SV=1
Length = 381
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 41/168 (24%), Positives = 69/168 (41%), Gaps = 25/168 (14%)
Query: 24 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISL---- 79
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF++L
Sbjct: 163 GLDSQDPMHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGTNPATDLRGAGFLALLHLL 222
Query: 80 -----ENLLYLARNFPKSFQDLLRKQEGDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPR 134
L +AR ++LR + ++PF + VNIT + IQ L E +
Sbjct: 223 YLVMDSKTLLMAR-------EILRLSR--HHIQQFPFCLMSVNITRIAIQALREECLSRE 273
Query: 135 TMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 182
+ ++ Y TF + H W + D V+K
Sbjct: 274 CNRQQKVIPVVNS-------FYAATFLRLAHIWRTQHKTISDSGFVLK 314
>sp|Q5XIQ2|ELMD3_RAT ELMO domain-containing protein 3 OS=Rattus norvegicus GN=Elmod3
PE=2 SV=1
Length = 356
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 72/163 (44%), Gaps = 15/163 (9%)
Query: 24 AYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLL 83
DS P H L+ ++ + L + W+++G+QG +P+TD RG GF++L +LL
Sbjct: 163 GLDSQNPTHGRVLQTIYKKLTGSKFDCALHGDHWEDLGFQGANPATDLRGTGFLALLHLL 222
Query: 84 YLARNFPKSFQDLLRKQE----GDRSVWEYPFAVAGVNITFMLIQMLDLEAVKPRTMVGA 139
YL + + LL QE + ++PF + VNIT + IQ L E +
Sbjct: 223 YLVMD----SKTLLMAQEILRLSHHHIQQFPFCLMSVNITRIAIQALREECLSRECNRRR 278
Query: 140 TFLKFLSENESAFDLLYCITFKLMDHQWLAMRASYMDFNTVMK 182
+ ++ Y TF + W + +D V+K
Sbjct: 279 KVIPVVNS-------FYAATFLHLARMWRTQHNTILDSGFVLK 314
>sp|Q54WH5|ELMOE_DICDI ELMO domain-containing protein E OS=Dictyostelium discoideum
GN=elmoE PE=4 SV=1
Length = 1677
Score = 47.8 bits (112), Expect = 5e-05, Method: Composition-based stats.
Identities = 27/92 (29%), Positives = 45/92 (48%), Gaps = 6/92 (6%)
Query: 10 QEECLQRLQ-LRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPS 68
+E +QRL + +D + H+ L LW +A + SE W +G++ +P
Sbjct: 475 KELHMQRLHPINVD-----KVLSHQILLSDLWGSALSSYPFGGINSEHWLLLGFRSSNPM 529
Query: 69 TDFRGGGFISLENLLYLARNFPKSFQDLLRKQ 100
DF+ G ++L NL Y ++ + FQ LL Q
Sbjct: 530 EDFKNTGVLALRNLSYFSKQHLQPFQSLLLTQ 561
Score = 37.4 bits (85), Expect = 0.067, Method: Composition-based stats.
Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Query: 109 YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWL 168
YP A +++T+ L + + + + + ++ + FD ++ TF L + W
Sbjct: 628 YPLATVAISLTYTLSNIFRIGRIND-SPIDSSIWDIAFSGSNWFDEIFVTTFNLFESLWH 686
Query: 169 AMRASYMDFNTVMKSTRRQLER 190
+ SY DF V+ TR +E+
Sbjct: 687 SEAHSYSDFPQVISHTREIIEK 708
>sp|Q09292|ELMD3_CAEEL ELMO domain-containing protein C56G7.3 OS=Caenorhabditis elegans
GN=C56G7.3 PE=4 SV=2
Length = 322
Score = 45.1 bits (105), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 58/144 (40%), Gaps = 14/144 (9%)
Query: 53 ISEQWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFPKSFQD---LLRKQEGDRSVWEY 109
+ W +G+Q P TDFRG G + L + + P + LL E + ++
Sbjct: 172 VGAHWVTVGFQSATPHTDFRGCGVLGLLQMHTFTQRVPANLLRAIVLLATTEPN----DF 227
Query: 110 PFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLA 169
P AV +NIT +L+ L A+ F S ++ +C +K +
Sbjct: 228 PLAVVSINITSILLTQLKKGALDNFGNEIEGLYPFFSALHASAMCRFCSIYK-------S 280
Query: 170 MRASYMDFNTVMKSTRRQLERELL 193
+ + + T+ RQLE+ L
Sbjct: 281 QKCTLANTQTIFSEITRQLEKSPL 304
>sp|P06839|RAD3_YEAST DNA repair helicase RAD3 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=RAD3 PE=1 SV=1
Length = 778
Score = 35.8 bits (81), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 34/67 (50%), Gaps = 8/67 (11%)
Query: 19 LRIDVAYDSSIPEHREAL---RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGG 75
L + +AY PEHR+ + R + EL +L+ + KE+G+Q DFRG G
Sbjct: 53 LSLTIAYQMHYPEHRKIIYCSRTMSEIEKALVELENLMDYRTKELGYQ-----EDFRGLG 107
Query: 76 FISLENL 82
S +NL
Sbjct: 108 LTSRKNL 114
>sp|Q6NZP1|ZRAB3_MOUSE DNA annealing helicase and endonuclease ZRANB3 OS=Mus musculus
GN=Zranb3 PE=1 SV=1
Length = 1069
Score = 33.1 bits (74), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 28/55 (50%), Gaps = 1/55 (1%)
Query: 32 HREAL-RALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 85
HR++L A W A P E+L +++ + WQ + GGG SL+NL L
Sbjct: 976 HRKSLLNAAWTAKLPLEQLNEMLRNPGEGHFWQVDHIRPVYEGGGQCSLDNLQTL 1030
>sp|Q5FWF4|ZRAB3_HUMAN DNA annealing helicase and endonuclease ZRANB3 OS=Homo sapiens
GN=ZRANB3 PE=1 SV=2
Length = 1079
Score = 32.7 bits (73), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 28/61 (45%)
Query: 26 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 85
D+ + + L A W + P E+L ++I + WQ + GGG SL+NL L
Sbjct: 981 DAPKSQRKNLLYATWTSKLPLEQLNEMIRNPGEGHFWQVDHIKPVYGGGGQCSLDNLQTL 1040
Query: 86 A 86
Sbjct: 1041 C 1041
>sp|P0DF59|ADCA_STRPQ Zinc-binding protein AdcA OS=Streptococcus pyogenes serotype M3
(strain SSI-1) GN=adcA PE=3 SV=1
Length = 515
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 FWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 65
++ + L+ L+L DVA +PE ++ + ++N F D+E++D W WQ
Sbjct: 304 YFTVMRKNLETLRLTTDVAGKEILPE-KDTTKTVYNGYFKDKEVKDRQLSDW-SGSWQSV 361
Query: 66 DP 67
P
Sbjct: 362 YP 363
>sp|P0DF58|ADCA_STRP3 Zinc-binding protein AdcA OS=Streptococcus pyogenes serotype M3
(strain ATCC BAA-595 / MGAS315) GN=adcA PE=3 SV=1
Length = 515
Score = 32.3 bits (72), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 FWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 65
++ + L+ L+L DVA +PE ++ + ++N F D+E++D W WQ
Sbjct: 304 YFTVMRKNLETLRLTTDVAGKEILPE-KDTTKTVYNGYFKDKEVKDRQLSDW-SGSWQSV 361
Query: 66 DP 67
P
Sbjct: 362 YP 363
>sp|Q9A0L9|ADCA_STRP1 Zinc-binding protein AdcA OS=Streptococcus pyogenes serotype M1
GN=adcA PE=3 SV=1
Length = 515
Score = 32.3 bits (72), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 FWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 65
++ + L+ L+L DVA +PE ++ + ++N F D+E++D W WQ
Sbjct: 304 YFTVMRKNLETLRLTTDVAGKEILPE-KDTTKTVYNGYFKDKEVKDRQLSDW-SGSWQSV 361
Query: 66 DP 67
P
Sbjct: 362 YP 363
>sp|Q8P1N2|ADCA_STRP8 Zinc-binding protein AdcA OS=Streptococcus pyogenes serotype M18
(strain MGAS8232) GN=adcA PE=3 SV=1
Length = 515
Score = 32.0 bits (71), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 FWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 65
++ + L+ L+L DVA +PE ++ + ++N F D+E++D W WQ
Sbjct: 304 YFTVMRKNLETLRLTTDVAGKEILPE-KDTTKTVYNGYFKDKEVKDRQLSDW-SGSWQSV 361
Query: 66 DP 67
P
Sbjct: 362 YP 363
>sp|Q5XD15|ADCA_STRP6 Zinc-binding protein AdcA OS=Streptococcus pyogenes serotype M6
(strain ATCC BAA-946 / MGAS10394) GN=adcA PE=3 SV=1
Length = 515
Score = 32.0 bits (71), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 17/62 (27%), Positives = 31/62 (50%), Gaps = 2/62 (3%)
Query: 6 FWCCQEECLQRLQLRIDVAYDSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGK 65
++ + L+ L+L DVA +PE ++ + ++N F D+E++D W WQ
Sbjct: 304 YFTVMRKNLETLRLTTDVAGKEILPE-KDTTKTVYNGYFKDKEVKDRQLSDW-SGSWQSV 361
Query: 66 DP 67
P
Sbjct: 362 YP 363
>sp|Q9UF56|FXL17_HUMAN F-box/LRR-repeat protein 17 OS=Homo sapiens GN=FBXL17 PE=2 SV=3
Length = 701
Score = 31.6 bits (70), Expect = 3.8, Method: Composition-based stats.
Identities = 20/80 (25%), Positives = 39/80 (48%)
Query: 111 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 170
+A+ + M I+ +D+ K T GAT + S++ L+ C + + L
Sbjct: 607 YALIAIGRYSMTIETVDVGWCKEITDQGATLIAQSSKSLRYLGLMRCDKVNEVTVEQLVQ 666
Query: 171 RASYMDFNTVMKSTRRQLER 190
+ ++ F+TV++ +R LER
Sbjct: 667 QYPHITFSTVLQDCKRTLER 686
>sp|Q55GR7|ELMOF_DICDI ELMO domain-containing protein F OS=Dictyostelium discoideum
GN=elmoF PE=4 SV=1
Length = 1185
Score = 30.8 bits (68), Expect = 7.0, Method: Composition-based stats.
Identities = 18/82 (21%), Positives = 35/82 (42%), Gaps = 9/82 (10%)
Query: 109 YPFAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWL 168
Y F+ G +T ++ ++ + + + + + F+ L+CI+F+L D W
Sbjct: 414 YSFSRVGFTLTNLIFELY---------IEDENLYEIIFDQDDWFEELFCISFELFDEIWE 464
Query: 169 AMRASYMDFNTVMKSTRRQLER 190
D+ V+ TR L R
Sbjct: 465 REGTCQEDYIPVLHKTRAVLSR 486
>sp|Q07422|DRTS_TOXGO Bifunctional dihydrofolate reductase-thymidylate synthase
OS=Toxoplasma gondii PE=3 SV=1
Length = 610
Score = 30.4 bits (67), Expect = 8.0, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 24/50 (48%), Gaps = 3/50 (6%)
Query: 44 FPDEELRDLISE---QWKEMGWQGKDPSTDFRGGGFISLENLLYLARNFP 90
P E+ D+ QW+ G KD TD+ G G L+N++ + R P
Sbjct: 417 LPHREVGDIGPGYGFQWRHFGAAYKDMHTDYTGQGVDQLKNVIQMLRTNP 466
>sp|E1BB03|ZRAB3_BOVIN DNA annealing helicase and endonuclease ZRANB3 OS=Bos taurus
GN=ZRANB3 PE=3 SV=3
Length = 1074
Score = 30.4 bits (67), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 27/60 (45%)
Query: 26 DSSIPEHREALRALWNAAFPDEELRDLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYL 85
D+ + + L A W + P E+L ++I + WQ GGG SL+NL L
Sbjct: 976 DAPKSQRKSLLDATWTSKLPLEQLNEMIRSPGEGHFWQVDHIKPVSGGGGQCSLDNLQTL 1035
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.325 0.138 0.429
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,542,488
Number of Sequences: 539616
Number of extensions: 2936369
Number of successful extensions: 8199
Number of sequences better than 100.0: 41
Number of HSP's better than 100.0 without gapping: 31
Number of HSP's successfully gapped in prelim test: 10
Number of HSP's that attempted gapping in prelim test: 8136
Number of HSP's gapped (non-prelim): 45
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 59 (27.3 bits)