Query 028270
Match_columns 211
No_of_seqs 202 out of 1342
Neff 9.6
Searched_HMMs 46136
Date Fri Mar 29 08:54:59 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028270.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/028270hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 KOG3235 Subunit of the major N 99.9 2E-26 4.2E-31 162.6 9.3 155 1-155 1-157 (193)
2 KOG3139 N-acetyltransferase [G 99.9 4.7E-22 1E-26 141.5 16.1 147 3-151 15-164 (165)
3 PRK09491 rimI ribosomal-protei 99.9 8.9E-21 1.9E-25 137.9 17.3 143 1-151 1-146 (146)
4 TIGR01575 rimI ribosomal-prote 99.8 7.9E-20 1.7E-24 129.8 14.9 130 11-147 1-131 (131)
5 PRK10146 aminoalkylphosphonic 99.8 6.1E-20 1.3E-24 133.0 13.9 129 1-132 3-137 (144)
6 TIGR03827 GNAT_ablB putative b 99.8 1.1E-19 2.3E-24 145.0 16.4 145 2-151 116-266 (266)
7 PRK10140 putative acetyltransf 99.8 3.9E-19 8.5E-24 131.1 18.0 146 2-149 4-160 (162)
8 COG0456 RimI Acetyltransferase 99.8 8.7E-20 1.9E-24 136.5 13.4 149 1-151 11-173 (177)
9 PRK03624 putative acetyltransf 99.8 8.7E-19 1.9E-23 125.7 15.2 127 1-134 2-131 (140)
10 TIGR02382 wecD_rffC TDP-D-fuco 99.8 5.4E-18 1.2E-22 128.8 14.8 128 2-134 44-186 (191)
11 KOG3234 Acetyltransferase, (GN 99.8 6.9E-19 1.5E-23 124.4 8.9 154 1-156 1-156 (173)
12 TIGR02406 ectoine_EctA L-2,4-d 99.8 5.2E-18 1.1E-22 124.9 13.5 127 4-133 1-128 (157)
13 PRK10975 TDP-fucosamine acetyl 99.8 2E-17 4.2E-22 126.0 15.0 128 3-135 48-190 (194)
14 PF13420 Acetyltransf_4: Acety 99.8 8.3E-17 1.8E-21 117.9 17.6 133 4-139 1-145 (155)
15 PTZ00330 acetyltransferase; Pr 99.8 2.6E-17 5.7E-22 119.5 14.5 126 2-133 7-141 (147)
16 PRK10809 ribosomal-protein-S5- 99.8 9.1E-17 2E-21 122.3 17.8 149 2-152 18-188 (194)
17 PRK15130 spermidine N1-acetylt 99.8 1.2E-16 2.7E-21 120.7 17.1 148 2-153 7-168 (186)
18 COG1247 Sortase and related ac 99.7 1.9E-16 4.1E-21 116.0 16.8 152 1-154 1-167 (169)
19 PRK10151 ribosomal-protein-L7/ 99.7 2.4E-16 5.3E-21 118.4 17.2 147 2-152 11-177 (179)
20 KOG3216 Diamine acetyltransfer 99.7 1.5E-16 3.4E-21 112.2 14.7 130 2-133 4-146 (163)
21 PF13527 Acetyltransf_9: Acety 99.7 1.5E-16 3.3E-21 112.7 14.8 120 3-131 1-127 (127)
22 PRK07922 N-acetylglutamate syn 99.7 1.3E-16 2.7E-21 118.9 14.2 123 1-133 5-127 (169)
23 PRK10514 putative acetyltransf 99.7 2.1E-16 4.6E-21 114.5 15.0 132 1-148 1-142 (145)
24 PRK07757 acetyltransferase; Pr 99.7 9.5E-17 2.1E-21 117.4 13.0 122 1-133 1-122 (152)
25 TIGR03103 trio_acet_GNAT GNAT- 99.7 2.7E-16 5.9E-21 136.4 17.4 133 2-136 83-220 (547)
26 PF13523 Acetyltransf_8: Acety 99.7 1.1E-15 2.3E-20 111.8 17.1 130 4-135 1-143 (152)
27 TIGR03585 PseH pseudaminic aci 99.7 4.7E-16 1E-20 114.0 15.1 140 3-147 2-155 (156)
28 PF00583 Acetyltransf_1: Acety 99.7 2.2E-16 4.7E-21 103.5 11.9 79 49-129 3-83 (83)
29 PRK10314 putative acyltransfer 99.7 1.7E-16 3.6E-21 116.4 11.0 139 5-151 10-150 (153)
30 TIGR03448 mycothiol_MshD mycot 99.7 1.2E-15 2.7E-20 123.1 15.9 132 2-136 150-291 (292)
31 PLN02706 glucosamine 6-phospha 99.7 2E-15 4.4E-20 110.1 15.2 126 2-132 7-143 (150)
32 TIGR01686 FkbH FkbH-like domai 99.7 1.7E-15 3.6E-20 123.8 15.8 122 2-131 187-319 (320)
33 PHA00673 acetyltransferase dom 99.7 2.3E-15 5E-20 108.8 14.6 123 6-132 11-145 (154)
34 PRK05279 N-acetylglutamate syn 99.7 8.5E-16 1.8E-20 130.8 13.4 119 2-133 295-417 (441)
35 KOG3138 Predicted N-acetyltran 99.7 2E-16 4.2E-21 117.4 8.2 150 1-154 16-175 (187)
36 TIGR01890 N-Ac-Glu-synth amino 99.7 1.2E-15 2.6E-20 129.4 14.1 123 2-133 283-405 (429)
37 PRK10562 putative acetyltransf 99.7 7.4E-15 1.6E-19 106.6 15.5 132 4-152 2-143 (145)
38 PLN02825 amino-acid N-acetyltr 99.7 1.9E-15 4.2E-20 129.0 14.3 136 3-151 369-514 (515)
39 PRK09831 putative acyltransfer 99.6 2E-15 4.3E-20 109.9 10.4 129 2-151 1-145 (147)
40 PHA01807 hypothetical protein 99.6 1.1E-14 2.3E-19 106.3 12.7 121 7-132 9-140 (153)
41 PF13673 Acetyltransf_10: Acet 99.6 2.3E-14 5E-19 99.9 13.4 104 11-128 1-117 (117)
42 COG1246 ArgA N-acetylglutamate 99.6 5.8E-15 1.2E-19 105.4 10.3 123 2-133 1-123 (153)
43 PRK12308 bifunctional arginino 99.6 8.4E-15 1.8E-19 129.1 13.4 122 2-134 464-585 (614)
44 COG3153 Predicted acetyltransf 99.6 7.3E-14 1.6E-18 102.6 16.2 145 1-155 3-154 (171)
45 PF13302 Acetyltransf_3: Acety 99.6 4E-14 8.6E-19 101.9 14.8 125 2-129 2-142 (142)
46 PF13508 Acetyltransf_7: Acety 99.6 5.2E-14 1.1E-18 91.6 11.9 77 41-130 3-79 (79)
47 TIGR03448 mycothiol_MshD mycot 99.6 9.2E-14 2E-18 112.2 14.2 121 5-136 4-131 (292)
48 PRK01346 hypothetical protein; 99.6 8.6E-14 1.9E-18 117.6 14.5 128 2-137 7-140 (411)
49 KOG2488 Acetyltransferase (GNA 99.6 1.1E-13 2.4E-18 101.3 12.2 108 27-136 78-185 (202)
50 KOG3396 Glucosamine-phosphate 99.5 3.8E-13 8.1E-18 93.2 10.7 126 2-132 7-143 (150)
51 PRK13688 hypothetical protein; 99.4 3.1E-12 6.6E-17 93.8 12.1 108 4-134 20-134 (156)
52 PF08445 FR47: FR47-like prote 99.4 5.1E-12 1.1E-16 83.4 11.4 76 50-132 6-81 (86)
53 COG2153 ElaA Predicted acyltra 99.4 2.4E-12 5.2E-17 90.4 8.3 139 6-153 12-154 (155)
54 COG1670 RimL Acetyltransferase 99.3 7.8E-11 1.7E-15 88.1 14.1 100 51-152 77-180 (187)
55 cd02169 Citrate_lyase_ligase C 99.3 1.6E-11 3.5E-16 98.7 10.5 76 44-132 8-83 (297)
56 COG3393 Predicted acetyltransf 99.3 2.6E-11 5.7E-16 93.7 11.0 89 41-136 177-265 (268)
57 COG3981 Predicted acetyltransf 99.2 5.7E-10 1.2E-14 80.9 11.6 129 2-133 4-159 (174)
58 KOG4144 Arylalkylamine N-acety 99.1 2.7E-11 5.9E-16 85.8 3.0 129 1-133 11-161 (190)
59 TIGR00124 cit_ly_ligase [citra 99.1 1E-09 2.2E-14 89.7 12.1 81 41-135 31-111 (332)
60 PF13718 GNAT_acetyltr_2: GNAT 99.1 4E-09 8.6E-14 79.4 14.1 116 33-152 18-196 (196)
61 PF08444 Gly_acyl_tr_C: Aralky 99.1 4.6E-10 1E-14 73.1 6.0 76 48-133 5-80 (89)
62 PF12746 GNAT_acetyltran: GNAT 99.0 5.2E-09 1.1E-13 82.6 12.5 91 41-141 165-255 (265)
63 KOG3397 Acetyltransferases [Ge 99.0 6.9E-09 1.5E-13 75.2 9.7 84 45-135 60-143 (225)
64 PF12568 DUF3749: Acetyltransf 99.0 5.3E-08 1.1E-12 67.6 13.1 119 2-132 2-124 (128)
65 TIGR01211 ELP3 histone acetylt 98.9 1.4E-08 3E-13 87.6 10.5 86 43-133 413-516 (522)
66 cd04301 NAT_SF N-Acyltransfera 98.9 2.1E-08 4.7E-13 60.9 8.5 63 44-109 2-64 (65)
67 COG3818 Predicted acetyltransf 98.8 1.5E-08 3.3E-13 70.0 5.9 128 1-134 7-149 (167)
68 COG1444 Predicted P-loop ATPas 98.7 5.9E-07 1.3E-11 79.8 14.4 116 36-155 464-614 (758)
69 PF14542 Acetyltransf_CG: GCN5 98.7 5.9E-07 1.3E-11 58.0 10.8 69 45-124 3-71 (78)
70 KOG4135 Predicted phosphogluco 98.7 1.2E-06 2.5E-11 62.1 13.0 81 52-133 83-170 (185)
71 COG3375 Uncharacterized conser 98.6 3.1E-06 6.6E-11 64.1 12.7 138 2-140 3-144 (266)
72 COG4552 Eis Predicted acetyltr 98.4 2.3E-06 4.9E-11 69.1 8.3 90 39-136 37-130 (389)
73 COG2388 Predicted acetyltransf 98.3 4.9E-06 1.1E-10 55.8 7.0 63 39-106 13-75 (99)
74 COG5628 Predicted acetyltransf 98.1 6E-05 1.3E-09 51.6 9.5 80 43-129 39-119 (143)
75 PF04958 AstA: Arginine N-succ 98.1 8.7E-05 1.9E-09 60.6 11.7 100 1-100 1-152 (342)
76 PRK10456 arginine succinyltran 98.0 5.8E-05 1.3E-09 61.5 9.8 96 1-96 1-146 (344)
77 PF00765 Autoind_synth: Autoin 98.0 0.0002 4.4E-09 53.8 11.5 139 8-151 6-173 (182)
78 COG0454 WecD Histone acetyltra 97.9 2.7E-05 5.9E-10 52.4 4.8 44 75-128 87-130 (156)
79 PF13480 Acetyltransf_6: Acety 97.8 0.0015 3.3E-08 46.2 13.0 102 3-111 21-135 (142)
80 PF06852 DUF1248: Protein of u 97.7 0.0028 6.1E-08 47.4 14.1 121 7-133 10-137 (181)
81 COG3053 CitC Citrate lyase syn 97.7 0.0013 2.7E-08 52.3 11.6 81 43-136 38-118 (352)
82 COG3882 FkbH Predicted enzyme 97.6 0.00026 5.7E-09 59.8 8.0 125 2-132 414-549 (574)
83 PRK13834 putative autoinducer 97.6 0.0025 5.5E-08 48.9 12.7 142 7-153 13-185 (207)
84 COG3916 LasI N-acyl-L-homoseri 97.4 0.0081 1.8E-07 45.5 12.8 145 6-155 11-185 (209)
85 KOG3698 Hyaluronoglucosaminida 97.4 0.0011 2.3E-08 57.1 8.2 142 2-150 680-890 (891)
86 TIGR03694 exosort_acyl putativ 97.3 0.0066 1.4E-07 47.8 11.4 125 3-132 9-197 (241)
87 TIGR03245 arg_AOST_alph argini 97.3 0.0024 5.2E-08 52.1 8.9 94 3-96 1-145 (336)
88 TIGR03244 arg_catab_AstA argin 97.3 0.0024 5.1E-08 52.1 8.9 92 3-94 1-142 (336)
89 TIGR03243 arg_catab_AOST argin 97.2 0.0017 3.7E-08 52.9 7.4 94 3-96 1-144 (335)
90 PF01233 NMT: Myristoyl-CoA:pr 97.1 0.023 5E-07 41.4 11.7 94 9-104 34-144 (162)
91 TIGR03019 pepcterm_femAB FemAB 97.0 0.017 3.7E-07 47.6 11.5 122 10-138 158-286 (330)
92 PF05301 Mec-17: Touch recepto 96.9 0.023 5.1E-07 39.2 9.9 81 40-124 3-97 (120)
93 PF13880 Acetyltransf_13: ESCO 96.9 0.0011 2.4E-08 41.4 3.1 30 69-98 5-34 (70)
94 PRK14852 hypothetical protein; 96.8 0.015 3.3E-07 53.9 11.0 146 3-153 30-201 (989)
95 PHA01733 hypothetical protein 96.8 0.0053 1.2E-07 44.2 6.2 122 3-134 4-133 (153)
96 COG3138 AstA Arginine/ornithin 96.8 0.0038 8.2E-08 49.3 5.7 90 1-90 1-140 (336)
97 TIGR03827 GNAT_ablB putative b 96.7 0.0072 1.6E-07 48.3 7.2 66 85-156 21-86 (266)
98 PF09390 DUF1999: Protein of u 96.7 0.13 2.8E-06 36.7 13.1 125 2-132 1-140 (161)
99 PHA00432 internal virion prote 96.7 0.012 2.7E-07 41.6 7.3 115 2-133 1-121 (137)
100 COG1243 ELP3 Histone acetyltra 96.6 0.0041 8.9E-08 52.5 5.0 76 50-132 415-508 (515)
101 cd04264 DUF619-NAGS DUF619 dom 96.4 0.018 3.9E-07 38.8 6.6 61 50-117 16-76 (99)
102 PF04768 DUF619: Protein of un 96.4 0.076 1.6E-06 39.5 10.5 115 6-130 27-143 (170)
103 KOG2036 Predicted P-loop ATPas 96.4 0.017 3.8E-07 51.3 8.0 85 69-155 614-748 (1011)
104 PF11039 DUF2824: Protein of u 96.4 0.16 3.5E-06 35.6 11.1 129 1-140 1-129 (151)
105 cd04265 DUF619-NAGS-U DUF619 d 96.1 0.038 8.3E-07 37.2 6.9 57 53-117 20-76 (99)
106 PF04377 ATE_C: Arginine-tRNA- 96.0 0.099 2.1E-06 36.9 8.9 96 29-132 25-121 (128)
107 PRK01305 arginyl-tRNA-protein 95.6 0.25 5.5E-06 38.8 10.4 98 29-134 130-228 (240)
108 COG5630 ARG2 Acetylglutamate s 95.5 0.038 8.1E-07 45.6 5.8 112 10-131 345-458 (495)
109 KOG2535 RNA polymerase II elon 95.5 0.028 6.1E-07 45.9 5.0 49 80-132 498-546 (554)
110 PLN03238 probable histone acet 95.4 0.057 1.2E-06 43.1 6.4 57 41-100 127-186 (290)
111 PF01853 MOZ_SAS: MOZ/SAS fami 95.4 0.14 3.1E-06 38.4 8.0 58 40-100 51-111 (188)
112 PTZ00064 histone acetyltransfe 95.1 0.052 1.1E-06 46.4 5.5 58 40-100 355-415 (552)
113 PLN03239 histone acetyltransfe 94.6 0.099 2.1E-06 42.9 5.9 57 41-100 185-244 (351)
114 PF09924 DUF2156: Uncharacteri 94.3 2.3 5.1E-05 34.4 13.7 106 3-112 134-247 (299)
115 PLN00104 MYST -like histone ac 94.3 0.062 1.3E-06 45.7 4.2 57 41-100 278-337 (450)
116 KOG2779 N-myristoyl transferas 93.7 0.54 1.2E-05 38.7 8.1 59 42-100 135-198 (421)
117 KOG4601 Uncharacterized conser 93.0 1.3 2.9E-05 34.2 8.9 57 69-129 108-164 (264)
118 PF11124 Pho86: Inorganic phos 92.5 2.2 4.8E-05 34.5 10.0 88 43-132 171-270 (304)
119 COG2401 ABC-type ATPase fused 92.0 0.11 2.4E-06 43.9 2.3 61 70-132 242-307 (593)
120 PF13444 Acetyltransf_5: Acety 91.7 0.62 1.3E-05 31.3 5.4 53 39-91 28-100 (101)
121 KOG2747 Histone acetyltransfer 91.3 0.24 5.3E-06 41.3 3.6 58 40-100 233-291 (396)
122 PF02388 FemAB: FemAB family; 90.9 2.2 4.7E-05 36.4 9.1 107 43-153 37-160 (406)
123 KOG2696 Histone acetyltransfer 90.9 0.83 1.8E-05 37.8 6.2 48 53-100 200-248 (403)
124 PF02799 NMT_C: Myristoyl-CoA: 90.8 5.7 0.00012 30.0 12.7 118 4-131 31-163 (190)
125 PF04339 DUF482: Protein of un 89.9 3.7 8.1E-05 34.5 9.4 117 7-136 210-332 (370)
126 PF02474 NodA: Nodulation prot 89.0 1 2.3E-05 33.2 4.8 140 7-153 15-178 (196)
127 cd04266 DUF619-NAGS-FABP DUF61 88.3 6.3 0.00014 26.9 8.1 47 69-122 39-87 (108)
128 KOG2779 N-myristoyl transferas 87.4 3.4 7.4E-05 34.2 7.2 119 4-132 263-396 (421)
129 COG2935 Putative arginyl-tRNA: 87.3 4.8 0.0001 31.6 7.7 63 50-117 159-221 (253)
130 PRK04531 acetylglutamate kinas 86.1 3.4 7.4E-05 35.1 7.0 104 10-130 262-365 (398)
131 PF11090 DUF2833: Protein of u 83.8 4.2 9.2E-05 26.4 5.0 28 104-132 56-83 (86)
132 COG5027 SAS2 Histone acetyltra 83.1 0.94 2E-05 37.2 2.3 56 40-98 233-291 (395)
133 KOG3014 Protein involved in es 78.9 8.7 0.00019 30.2 6.2 55 69-124 183-238 (257)
134 COG5092 NMT1 N-myristoyl trans 78.8 21 0.00045 29.3 8.4 59 42-100 133-196 (451)
135 cd03173 DUF619-like DUF619 dom 76.0 21 0.00045 23.9 7.6 47 69-122 33-79 (98)
136 PRK00756 acyltransferase NodA; 75.1 24 0.00051 26.2 7.1 112 7-124 15-135 (196)
137 PRK02983 lysS lysyl-tRNA synth 74.7 22 0.00047 34.5 8.8 66 43-113 422-487 (1094)
138 PF12261 T_hemolysin: Thermost 71.1 35 0.00077 25.6 7.6 77 47-132 40-141 (179)
139 KOG4387 Ornithine decarboxylas 68.5 39 0.00084 25.3 7.1 80 74-154 104-186 (191)
140 PHA02769 hypothetical protein; 66.7 6.4 0.00014 27.0 2.6 44 87-134 94-140 (154)
141 COG5653 Protein involved in ce 63.0 75 0.0016 27.1 8.6 86 22-113 249-338 (406)
142 COG5092 NMT1 N-myristoyl trans 58.4 52 0.0011 27.1 6.7 121 4-131 261-412 (451)
143 COG2898 Uncharacterized conser 57.1 70 0.0015 28.5 7.8 64 45-112 396-459 (538)
144 cd09012 Glo_EDI_BRP_like_24 Th 55.6 19 0.00041 24.4 3.5 16 116-132 12-27 (124)
145 cd07235 MRD Mitomycin C resist 54.8 15 0.00032 24.8 2.9 24 107-132 4-27 (122)
146 PF02100 ODC_AZ: Ornithine dec 51.4 75 0.0016 21.6 7.0 53 78-132 31-86 (108)
147 PF07395 Mig-14: Mig-14; Inte 50.6 33 0.00071 27.4 4.4 60 42-105 174-239 (264)
148 cd08356 Glo_EDI_BRP_like_17 Th 48.8 16 0.00034 24.6 2.2 18 116-134 13-30 (113)
149 PF00571 CBS: CBS domain CBS d 47.1 35 0.00075 19.4 3.3 35 25-59 14-48 (57)
150 cd08358 Glo_EDI_BRP_like_21 Th 46.8 45 0.00099 23.3 4.3 20 115-134 13-32 (127)
151 cd08350 BLMT_like BLMT, a bleo 46.5 25 0.00054 23.6 3.0 19 116-135 14-32 (120)
152 PF00903 Glyoxalase: Glyoxalas 46.0 20 0.00044 23.9 2.4 29 106-135 4-32 (128)
153 TIGR02990 ectoine_eutA ectoine 45.5 31 0.00068 27.1 3.7 44 88-133 105-151 (239)
154 cd08353 Glo_EDI_BRP_like_7 Thi 45.3 21 0.00046 24.8 2.5 29 103-133 3-31 (142)
155 COG3473 Maleate cis-trans isom 45.1 40 0.00087 26.1 3.9 39 94-134 109-150 (238)
156 PF13380 CoA_binding_2: CoA bi 44.6 48 0.001 22.7 4.1 87 34-132 21-107 (116)
157 COG2994 HlyC ACP:hemolysin acy 41.1 1.3E+02 0.0029 21.6 5.8 40 26-65 35-76 (148)
158 COG3543 Uncharacterized conser 40.7 42 0.00092 23.7 3.2 42 74-115 9-50 (135)
159 PF08901 DUF1847: Protein of u 38.9 49 0.0011 24.2 3.5 42 91-134 43-88 (157)
160 PF04816 DUF633: Family of unk 38.9 54 0.0012 25.1 4.0 50 85-135 74-124 (205)
161 COG4353 Uncharacterized conser 38.6 1.6E+02 0.0035 21.7 7.8 71 47-122 34-104 (192)
162 cd04263 DUF619-NAGK-FABP DUF61 38.2 1.2E+02 0.0027 20.3 7.4 43 69-117 33-75 (98)
163 PRK15312 antimicrobial resista 37.7 81 0.0018 25.7 4.8 60 42-105 204-269 (298)
164 KOG0207 Cation transport ATPas 37.0 3.8E+02 0.0081 25.8 9.4 65 40-132 702-766 (951)
165 cd08352 Glo_EDI_BRP_like_1 Thi 36.6 43 0.00092 22.2 2.9 29 103-132 3-31 (125)
166 cd08346 PcpA_N_like N-terminal 36.5 49 0.0011 21.9 3.2 28 106-134 4-31 (126)
167 COG2348 Peptidoglycan interpep 36.2 2.8E+02 0.0062 23.9 10.1 106 41-152 40-163 (418)
168 cd08347 PcpA_C_like C-terminal 35.1 46 0.001 24.0 3.0 30 104-134 2-31 (157)
169 cd07246 Glo_EDI_BRP_like_8 Thi 34.6 79 0.0017 20.8 4.0 21 114-134 11-31 (122)
170 cd07265 2_3_CTD_N N-terminal d 34.1 43 0.00093 22.5 2.6 29 104-133 5-33 (122)
171 PHA00771 head assembly protein 33.2 1.8E+02 0.0038 20.6 9.9 85 50-141 46-130 (151)
172 COG2266 GTP:adenosylcobinamide 32.7 1.1E+02 0.0024 22.9 4.6 47 87-136 26-72 (177)
173 COG3146 Uncharacterized protei 32.2 2.7E+02 0.0059 23.3 7.0 115 7-134 225-345 (387)
174 cd07233 Glyoxalase_I Glyoxalas 30.9 85 0.0018 20.7 3.7 26 107-133 4-29 (121)
175 cd07264 Glo_EDI_BRP_like_15 Th 30.8 71 0.0015 21.2 3.3 16 117-132 13-28 (125)
176 PF00925 GTP_cyclohydro2: GTP 30.2 1.1E+02 0.0024 22.6 4.3 46 78-134 122-167 (169)
177 PF12652 CotJB: CotJB protein; 29.7 29 0.00063 22.2 1.0 35 89-124 3-37 (78)
178 PF06557 DUF1122: Protein of u 29.7 2.3E+02 0.0051 21.0 7.3 82 44-132 21-120 (170)
179 cd08355 Glo_EDI_BRP_like_14 Th 29.7 79 0.0017 21.0 3.4 21 114-134 9-29 (122)
180 TIGR03645 glyox_marine lactoyl 29.4 54 0.0012 23.7 2.6 29 103-132 4-32 (162)
181 cd07254 Glo_EDI_BRP_like_20 Th 28.8 96 0.0021 20.6 3.6 27 107-133 3-30 (120)
182 PF02388 FemAB: FemAB family; 27.6 3.9E+02 0.0084 22.8 9.6 57 51-112 302-359 (406)
183 cd08342 HPPD_N_like N-terminal 27.3 1.1E+02 0.0023 21.2 3.7 27 107-134 4-30 (136)
184 PF12681 Glyoxalase_2: Glyoxal 27.2 61 0.0013 20.9 2.3 19 116-134 7-25 (108)
185 PRK04101 fosfomycin resistance 26.9 74 0.0016 22.1 2.8 30 103-133 4-33 (139)
186 cd07267 THT_Oxygenase_N N-term 26.8 1E+02 0.0022 20.3 3.4 26 106-133 6-31 (113)
187 PF14506 CppA_N: CppA N-termin 26.8 46 0.001 23.2 1.6 20 117-136 13-32 (125)
188 COG0807 RibA GTP cyclohydrolas 26.5 1.4E+02 0.003 22.8 4.3 52 74-136 119-170 (193)
189 PF14696 Glyoxalase_5: Hydroxy 26.4 35 0.00076 24.4 1.1 33 102-136 8-40 (139)
190 PF10566 Glyco_hydro_97: Glyco 26.4 1.7E+02 0.0036 23.6 5.0 41 86-129 70-121 (273)
191 cd06588 PhnB_like Escherichia 26.0 1E+02 0.0023 21.0 3.4 28 108-135 4-31 (128)
192 cd07238 Glo_EDI_BRP_like_5 Thi 25.9 73 0.0016 20.8 2.6 17 116-132 12-28 (112)
193 cd07252 BphC1-RGP6_N_like N-te 25.1 75 0.0016 21.3 2.5 27 106-133 5-31 (120)
194 cd07253 Glo_EDI_BRP_like_2 Thi 25.0 85 0.0018 20.6 2.8 31 103-134 3-33 (125)
195 cd07255 Glo_EDI_BRP_like_12 Th 24.8 77 0.0017 21.1 2.6 29 105-134 4-32 (125)
196 PF04339 DUF482: Protein of un 24.5 4.4E+02 0.0095 22.3 11.0 119 5-132 3-159 (370)
197 PRK14968 putative methyltransf 24.3 2E+02 0.0044 20.8 5.0 46 89-136 129-174 (188)
198 cd08354 Glo_EDI_BRP_like_13 Th 24.0 1.3E+02 0.0028 19.8 3.6 19 115-133 11-29 (122)
199 PLN03042 Lactoylglutathione ly 24.0 1.5E+02 0.0033 22.2 4.2 19 116-134 39-57 (185)
200 cd07241 Glo_EDI_BRP_like_3 Thi 23.8 91 0.002 20.6 2.8 25 107-132 5-29 (125)
201 cd09013 BphC-JF8_N_like N-term 23.7 86 0.0019 20.9 2.6 29 104-133 7-35 (121)
202 COG5428 Uncharacterized conser 23.5 1.4E+02 0.0031 18.5 3.2 24 40-63 29-52 (69)
203 PLN02300 lactoylglutathione ly 23.4 60 0.0013 26.0 2.0 30 103-133 24-53 (286)
204 PRK11478 putative lyase; Provi 23.4 75 0.0016 21.4 2.3 28 104-132 7-34 (129)
205 cd08361 PpCmtC_N N-terminal do 23.4 1.1E+02 0.0024 20.7 3.1 28 105-133 8-35 (124)
206 COG2764 PhnB Uncharacterized p 23.1 1.3E+02 0.0027 21.5 3.4 28 108-135 5-32 (136)
207 PF13289 SIR2_2: SIR2-like dom 23.1 2E+02 0.0044 19.7 4.6 23 107-130 119-142 (143)
208 PF02836 Glyco_hydro_2_C: Glyc 22.8 3.3E+02 0.007 21.9 6.2 65 70-136 15-81 (298)
209 cd07240 ED_TypeI_classII_N N-t 22.7 1.4E+02 0.0029 19.5 3.5 19 116-134 14-32 (117)
210 PRK10291 glyoxalase I; Provisi 22.4 83 0.0018 21.4 2.4 18 116-133 8-25 (129)
211 TIGR00068 glyox_I lactoylgluta 22.4 99 0.0022 21.8 2.8 31 102-133 16-46 (150)
212 PF04015 DUF362: Domain of unk 22.1 2E+02 0.0044 21.6 4.6 49 83-133 17-67 (206)
213 cd08344 MhqB_like_N N-terminal 21.4 89 0.0019 20.6 2.3 27 105-133 4-30 (112)
214 PRK09318 bifunctional 3,4-dihy 21.0 1.8E+02 0.0038 24.8 4.3 47 78-135 310-356 (387)
215 PTZ00129 40S ribosomal protein 21.0 3.4E+02 0.0073 19.8 6.5 51 83-135 69-131 (149)
216 cd08359 Glo_EDI_BRP_like_22 Th 20.9 1.4E+02 0.0031 19.6 3.3 17 117-133 14-30 (119)
217 cd09011 Glo_EDI_BRP_like_23 Th 20.8 1E+02 0.0022 20.5 2.5 25 107-132 6-30 (120)
218 COG0346 GloA Lactoylglutathion 20.7 1.1E+02 0.0024 19.9 2.7 31 104-135 3-33 (138)
219 cd07250 HPPD_C_like C-terminal 20.7 97 0.0021 23.2 2.6 31 104-134 4-35 (191)
220 cd08357 Glo_EDI_BRP_like_18 Th 20.6 1.6E+02 0.0035 19.4 3.5 18 116-133 11-28 (125)
221 TIGR00505 ribA GTP cyclohydrol 20.6 2.3E+02 0.0049 21.4 4.5 46 78-134 121-166 (191)
No 1
>KOG3235 consensus Subunit of the major N alpha-acetyltransferase [General function prediction only]
Probab=99.94 E-value=2e-26 Score=162.58 Aligned_cols=155 Identities=68% Similarity=1.037 Sum_probs=143.9
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC--ceeEEEEEEEEc
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN--ECHGHITSLAVL 78 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~--~~~~~i~~l~V~ 78 (211)
||.||+++++|+-.+..++..+.|+.|...+|+...+++|...||+.+++|+|||++......++. .+.+.|.+++|.
T Consensus 1 ~m~iR~ar~~DL~~mQ~~Nl~~lpENyqmkyylyh~lswp~lSyVA~D~~gkiVGYvlAkmee~p~~~~~hGhItSlaV~ 80 (193)
T KOG3235|consen 1 GMNIRRARPDDLLEMQHCNLLNLPENYQMKYYLYHGLSWPQLSYVAEDENGKIVGYVLAKMEEDPDDEPPHGHITSLAVK 80 (193)
T ss_pred CcccccCCHHHHHHhhhcccccCcHHHhHHHHHHhhcccccceEEEEcCCCcEEEEeeeehhhcccCCCCCCeeEEeeeh
Confidence 688999999999999999999999999999999999999999999998899999999888776332 248999999999
Q ss_pred CCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecccCCC
Q 028270 79 RTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQ 155 (211)
Q Consensus 79 p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l~~~~ 155 (211)
..||+.|||++||......+.+..+++.+.|+|..+|.+|+.+|+.++||++......||.+|+|++.|.|.|....
T Consensus 81 rs~RrlGla~kLm~qa~rAm~E~~~A~yvsLHVR~SNraAl~LY~~tl~F~v~eve~kYYadGedAyaM~~~L~~~~ 157 (193)
T KOG3235|consen 81 RSYRRLGLAQKLMNQASRAMVEVYEAKYVSLHVRKSNRAALHLYKNTLGFVVCEVEPKYYADGEDAYAMRKDLSVCA 157 (193)
T ss_pred hhHHHhhHHHHHHHHHHHHHHHhhcceEEEEeeecccHHHHHhhhhccceEEeecccccccccHHHHHHHHHHHHHH
Confidence 99999999999999999988888899999999999999999999966999999999999999999999999997655
No 2
>KOG3139 consensus N-acetyltransferase [General function prediction only]
Probab=99.90 E-value=4.7e-22 Score=141.46 Aligned_cols=147 Identities=29% Similarity=0.429 Sum_probs=126.8
Q ss_pred EEEeC---ChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcC
Q 028270 3 CIRKA---TVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLR 79 (211)
Q Consensus 3 ~ir~~---~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p 79 (211)
.|++. ...-++.+.++....++++++.-.+.....+++..++++.++++..||++....+...+...++|..++|++
T Consensus 15 ~i~~~~~~~~~~l~~im~Li~k~lsepyS~~tyrYf~~~wp~~~~~a~d~~~~~VGai~ck~~~~r~~~rgyi~mLaV~~ 94 (165)
T KOG3139|consen 15 VIRPSLYPAEEYLADIMRLIDKDLSEPYSIYTYRYFVPNWPCFCFLALDEKGDTVGAIVCKLDTHRNTLRGYIAMLAVDS 94 (165)
T ss_pred eeeeecchHHHHHHHHHHHHhhhcCchhHHHHHHhcccCCceEEEEEEcCCCceEEEEEEeccccCCcceEEEEEEEech
Confidence 34554 344555678888888999998877766677788888888874555799998887776664579999999999
Q ss_pred CccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecc
Q 028270 80 THRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 151 (211)
Q Consensus 80 ~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l 151 (211)
+|||+|||++|.+.+++.++. .|+..|.|++...|.+|+++|++ +||+..+++..||.++-|++.|...+
T Consensus 95 e~Rg~GIg~aLvr~aId~m~~-~g~~eVvLeTe~~n~~A~~LY~s-LGF~r~~r~~~YYlng~dA~rl~L~~ 164 (165)
T KOG3139|consen 95 EYRGQGIGKALVRKAIDAMRS-RGYSEVVLETEVTNLSALRLYES-LGFKRDKRLFRYYLNGMDALRLKLFF 164 (165)
T ss_pred hhccccHHHHHHHHHHHHHHH-CCCcEEEEeccccchHHHHHHHh-cCceEecceeEEEECCcceEEEEeec
Confidence 999999999999999999999 89999999999999999999999 99999999999999999999998765
No 3
>PRK09491 rimI ribosomal-protein-alanine N-acetyltransferase; Provisional
Probab=99.88 E-value=8.9e-21 Score=137.91 Aligned_cols=143 Identities=24% Similarity=0.287 Sum_probs=114.1
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
|+.||+++.+|++.+..+.......+|....+.... ......+.+.. ++++||++.+..... ...+..++|+|+
T Consensus 1 ~~~iR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~-~~~~vG~~~~~~~~~----~~~~~~i~v~~~ 74 (146)
T PRK09491 1 MNTISSLTPADLPAAYHIEQRAHAFPWSEKTFASNQ-GERYLNLKLTV-NGQMAAFAITQVVLD----EATLFNIAVDPD 74 (146)
T ss_pred CcchhcCChhhhHHHHHHHHhcCCCCCCHHHHHHHH-hcCceEEEEEE-CCeEEEEEEEEeecC----ceEEEEEEECHH
Confidence 889999999999999999777665566554443321 12222233444 899999998876543 456788999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC---Ccceeeeeecc
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD---GEDAYDMRKQL 151 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~---~~d~~~m~k~l 151 (211)
|||+|+|+.+++.+++.+++ .++..+++.+...|.++++||+| +||+..+..+.++.+ ..|.++|.+.+
T Consensus 75 ~rg~G~g~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~a~~~y~k-~Gf~~~~~~~~~~~~~~~~~d~~~~~~~~ 146 (146)
T PRK09491 75 YQRQGLGRALLEHLIDELEK-RGVATLWLEVRASNAAAIALYES-LGFNEVTIRRNYYPTADGREDAIIMALPL 146 (146)
T ss_pred HccCCHHHHHHHHHHHHHHH-CCCcEEEEEEccCCHHHHHHHHH-cCCEEeeeeeccccCCCCceeEEEEeccC
Confidence 99999999999999999987 89999999999999999999999 999999888887643 25888888754
No 4
>TIGR01575 rimI ribosomal-protein-alanine acetyltransferase. Members of this model belong to the GCN5-related N-acetyltransferase (GNAT) superfamily. This model covers prokarotes and the archaea. The seed contains a characterized accession for Gram negative E. coli. An untraceable characterized accession (PIR|S66013) for Gram positive B. subtilis scores well (205.0) in the full alignment. Characterized members are lacking in the archaea. Noise cutoff (72.4) was set to exclude M. loti paralog of rimI. Trusted cutoff (80.0) was set at next highest scoring member in the mini-database.
Probab=99.85 E-value=7.9e-20 Score=129.80 Aligned_cols=130 Identities=25% Similarity=0.355 Sum_probs=108.6
Q ss_pred hHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHH
Q 028270 11 DLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKL 90 (211)
Q Consensus 11 D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~L 90 (211)
|++.+.++....|+.+|....+...+......++++.. ++++||++.+..... ...+..++|+|+|||+|+|++|
T Consensus 1 d~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~vg~~~~~~~~~----~~~i~~~~v~~~~rg~G~g~~l 75 (131)
T TIGR01575 1 DLKAVLEIEAAAFAFPWTEAQFAEELANYHLCYLLARI-GGKVVGYAGVQIVLD----EAHILNIAVKPEYQGQGIGRAL 75 (131)
T ss_pred CHHHHHHHHHhhCCCCCCHHHHHHHhcCCCceEEEEec-CCeEEEEEEEEecCC----CeEEEEEEECHHHcCCCHHHHH
Confidence 67888899999998888777766655444444455554 899999999776544 5678899999999999999999
Q ss_pred HHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCC-cceeee
Q 028270 91 MNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADG-EDAYDM 147 (211)
Q Consensus 91 l~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~-~d~~~m 147 (211)
++.+++++++ .+.+.+++.+.+.|..+++||++ +||+..+..+.|+..+ +|.++|
T Consensus 76 l~~~~~~~~~-~~~~~i~~~~~~~n~~~~~~y~~-~Gf~~~~~~~~~~~~~~~~~~~~ 131 (131)
T TIGR01575 76 LRELIDEAKG-RGVNEIFLEVRVSNIAAQALYKK-LGFNEIAIRRNYYPDPGEDAIVM 131 (131)
T ss_pred HHHHHHHHHH-cCCCeEEEEEecccHHHHHHHHH-cCCCccccccccccCCCcccccC
Confidence 9999999998 79999999999999999999999 9999999988877655 677765
No 5
>PRK10146 aminoalkylphosphonic acid N-acetyltransferase; Provisional
Probab=99.84 E-value=6.1e-20 Score=132.95 Aligned_cols=129 Identities=22% Similarity=0.224 Sum_probs=100.4
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHH----HHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC--ceeEEEEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKY----YFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN--ECHGHITS 74 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~----~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~--~~~~~i~~ 74 (211)
|+.||+++.+|++.+.++.....+..+.... +...+......++++.. ++++||++.+....... ...++|..
T Consensus 3 ~~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~-~~~ivG~~~~~~~~~~~~~~~~~~i~~ 81 (144)
T PRK10146 3 ACELRPATQYDTDAVYALICELKQAEFDHQAFRVGFNANLRDPNMRYHLALL-DGEVVGMIGLHLQFHLHHVNWIGEIQE 81 (144)
T ss_pred ccEEeeCcHhhHHHHHHHHHHHhcccCCHHHHHHHHHHHhcCCCceEEEEEE-CCEEEEEEEEEecccccccchhheehe
Confidence 5899999999999999987765544333222 22222233345566665 89999999887542211 11357889
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
++|+|+|||+|+|+.||+++++++++ .|++.+.+.+...|..|++||++ +||+..+
T Consensus 82 l~v~p~~rg~GiG~~Ll~~~~~~a~~-~~~~~i~l~~~~~n~~a~~fY~~-~Gf~~~~ 137 (144)
T PRK10146 82 LVVMPQARGLNVGSKLLAWAEEEARQ-AGAEMTELSTNVKRHDAHRFYLR-EGYEQSH 137 (144)
T ss_pred eEECHHHcCCCHHHHHHHHHHHHHHH-cCCcEEEEecCCCchHHHHHHHH-cCCchhh
Confidence 99999999999999999999999999 89999999999999999999999 9998765
No 6
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=99.84 E-value=1.1e-19 Score=144.96 Aligned_cols=145 Identities=26% Similarity=0.293 Sum_probs=116.5
Q ss_pred eEEEeCChhhHHHHHHhhhhcCC---ccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEc
Q 028270 2 VCIRKATVDDLLAMQACNLFCLP---ENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVL 78 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~---~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~ 78 (211)
+.||+++++|++.+.++....|+ .++....++.........++++.. +|++||++.+....... .++|..++|+
T Consensus 116 ~~IR~a~~~D~~~l~~L~~~v~~~~~~~~~~~~~l~~~~~~~~~~~v~~~-~g~iVG~~~~~~~~~~~--~~eI~~i~V~ 192 (266)
T TIGR03827 116 FTLRIATEDDADAMAALYRKVFPTYPFPIHDPAYLLETMKSNVVYFGVED-GGKIIALASAEMDPENG--NAEMTDFATL 192 (266)
T ss_pred eEEEECCHHHHHHHHHHHHHHhccCCCCccCHHHHHHHhcCCcEEEEEEE-CCEEEEEEEEecCCCCC--cEEEEEEEEC
Confidence 78999999999999999888764 233333444444444455666665 89999999875433322 6789999999
Q ss_pred CCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecc-ccCC--cceeeeeecc
Q 028270 79 RTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKY-YADG--EDAYDMRKQL 151 (211)
Q Consensus 79 p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~-~~~~--~d~~~m~k~l 151 (211)
|+|||+|+|++||+.+++++++ .|+..+++.+...|.+++++|+| +||+..++.+.. +.+| +|..+|.|.|
T Consensus 193 P~yRG~GiG~~Ll~~l~~~a~~-~g~~~l~~~~~~~n~~a~~ly~k-~GF~~~G~l~n~~~i~G~~~d~~i~~k~l 266 (266)
T TIGR03827 193 PEYRGKGLAKILLAAMEKEMKE-KGIRTAYTIARASSYGMNITFAR-LGYAYGGTLVNNTNISGGFESMNIWYKQL 266 (266)
T ss_pred HHHcCCCHHHHHHHHHHHHHHH-CCCcEEEeehhhcchhHHHHHHH-cCCccccEEeecceecCCcccceeeeecC
Confidence 9999999999999999999998 89999999999999999999999 999999998873 3334 6888888754
No 7
>PRK10140 putative acetyltransferase YhhY; Provisional
Probab=99.84 E-value=3.9e-19 Score=131.05 Aligned_cols=146 Identities=21% Similarity=0.293 Sum_probs=108.4
Q ss_pred eEEEeCChhhHHHHHHhhhhc--CC----c-cchhHHHHHHHhcCC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFC--LP----E-NYQMKYYFYHILSWP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHIT 73 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~--~~----~-~~~~~~~~~~~~~~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~ 73 (211)
+.||+++.+|++.+.++.... +. . ......+...+...+ ..++++.. +|++||++.+..............
T Consensus 4 i~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~vG~~~~~~~~~~~~~~~~~~ 82 (162)
T PRK10140 4 IVIRHAETRDYEAIRQIHAQPEVYHNTLQVPHPSDHMWQERLADRPGIKQLVACI-DGDVVGHLTIDVQQRPRRSHVADF 82 (162)
T ss_pred cEEEecchhhHHHHHHHHhCcccccccccCCCcCHHHHHHHhhcCCCcEEEEEEE-CCEEEEEEEEecccccccceEEEE
Confidence 789999999999999987642 11 1 123334444433333 34566655 899999998875432211122223
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecccc-CC--cceeeeee
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYA-DG--EDAYDMRK 149 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~-~~--~d~~~m~k 149 (211)
.++|+|+|||+|||+.|++.+++++++..+.+++.+.+...|.+|++||+| +||+..+..+.++. ++ .|.++|.+
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~l~~~~~~~~~~~~i~l~v~~~N~~a~~~y~k-~GF~~~g~~~~~~~~~~~~~d~~~~~~ 160 (162)
T PRK10140 83 GICVDSRWKNRGVASALMREMIEMCDNWLRVDRIELTVFVDNAPAIKVYKK-YGFEIEGTGKKYALRNGEYVDAYYMAR 160 (162)
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHhhCCccEEEEEEEcCCHHHHHHHHH-CCCEEEeecccceeeCCeEEEEEEEEe
Confidence 589999999999999999999999987568999999999999999999999 99999998777543 33 37777765
No 8
>COG0456 RimI Acetyltransferases [General function prediction only]
Probab=99.83 E-value=8.7e-20 Score=136.55 Aligned_cols=149 Identities=34% Similarity=0.538 Sum_probs=125.1
Q ss_pred CeEEEeCChhhHH--HHHHhhhhcCC--ccchhHHHHHHHhcCCCeEEEEEec--CC----cEEEEEEEEEecCCCc--e
Q 028270 1 MVCIRKATVDDLL--AMQACNLFCLP--ENYQMKYYFYHILSWPQLLYVAEDY--NG----RIVGYVLAKMEEESNE--C 68 (211)
Q Consensus 1 Mi~ir~~~~~D~~--~l~~l~~~~~~--~~~~~~~~~~~~~~~~~~~~v~~~~--~g----~ivG~~~~~~~~~~~~--~ 68 (211)
|+.+|+++..|+. .+..+....|. .+|+...+...+...+..++++... ++ +++|++.......... .
T Consensus 11 ~~~ir~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~v~~~~~~~~~~~~~~~G~~~~~~~~~~~~~~~ 90 (177)
T COG0456 11 KVTIREAINKDLLDVALAALEARTFDIRLPWSREYFEKDLTQAPELLLVAETGGLDGLLDGKVVGFLLVRVVDGRPSADH 90 (177)
T ss_pred ceehhhhhhcccchHHHHHHhhhcCCCCCcchHHHHHHHHhhCcceeEEEEecccCCCcccceeEEEEEEEecCCccccC
Confidence 4678999999999 88888888888 5889888888888888888888752 23 5999999874443210 1
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCC-cEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcc-eee
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGA-EYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGED-AYD 146 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~-~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d-~~~ 146 (211)
.++|..++|+|+|||+|||++|++++++.+.+ .+. ..+.|+|..+|.+|++||++ +||+..++...||.++.+ .+.
T Consensus 91 ~~~i~~iaV~p~~r~~Gig~~Ll~~~~~~~~~-~~~~~~~~L~V~~~N~~Ai~lY~~-~GF~~~~~~~~yy~~~~~~a~~ 168 (177)
T COG0456 91 EGHIYNLAVDPEYRGRGIGRALLDEALERLRE-RGLADKIVLEVRESNEAAIGLYRK-LGFEVVKIRKNYYADGNGDALL 168 (177)
T ss_pred ccEEEEEEEChHhhcCCHHHHHHHHHHHHHHh-cCCCceEEEEEecCChHHHHHHHH-cCCEEEeeehhhccCCcchhHH
Confidence 57999999999999999999999999999988 676 89999999999999999999 999999999999988764 776
Q ss_pred eeecc
Q 028270 147 MRKQL 151 (211)
Q Consensus 147 m~k~l 151 (211)
|.+..
T Consensus 169 ~~~~~ 173 (177)
T COG0456 169 MLKML 173 (177)
T ss_pred HHHhh
Confidence 66544
No 9
>PRK03624 putative acetyltransferase; Provisional
Probab=99.82 E-value=8.7e-19 Score=125.73 Aligned_cols=127 Identities=27% Similarity=0.332 Sum_probs=99.5
Q ss_pred CeEEEeCChhhHHHHHHhhhhcC-CccchhH-HHHHHHh-cCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCL-PENYQMK-YYFYHIL-SWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV 77 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~-~~~~~~~-~~~~~~~-~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V 77 (211)
++.||+++++|++.+.++..... ..+|... ....... .....++++.. ++++||++.+..... ..++..++|
T Consensus 2 ~~~ir~~~~~d~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~vG~~~~~~~~~----~~~i~~i~v 76 (140)
T PRK03624 2 AMEIRVFRQADFEAVIALWERCDLTRPWNDPEMDIERKLNHDPSLFLVAEV-GGEVVGTVMGGYDGH----RGWAYYLAV 76 (140)
T ss_pred ceEEEEcccccHHHHHHHHHhcCCCcchhhHHHHHHHHhcCCCceEEEEEc-CCcEEEEEEeeccCC----CceEEEEEE
Confidence 48899999999999999987652 2233221 1122222 23345666665 889999998764332 467888999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+|+|||+|+|+.||..+++++++ .|++.+.+.+.+.|..+++||+| +||+..+..
T Consensus 77 ~p~~rg~Gig~~ll~~~~~~~~~-~~~~~~~~~~~~~N~~~~~~y~k-~GF~~~~~~ 131 (140)
T PRK03624 77 HPDFRGRGIGRALVARLEKKLIA-RGCPKINLQVREDNDAVLGFYEA-LGYEEQDRI 131 (140)
T ss_pred CHHHhCCCHHHHHHHHHHHHHHH-CCCCEEEEEEecCcHHHHHHHHH-cCCccccEE
Confidence 99999999999999999999998 89999999999999999999999 999987643
No 10
>TIGR02382 wecD_rffC TDP-D-fucosamine acetyltransferase. This model represents the WecD protein (Formerly RffC) for the biosynthesis of enterobacterial common antigen (ECA), an outer leaflet, outer membrane glycolipid with a trisaccharide repeat unit. WecD is a member of the GNAT family of acetytransferases (pfam00583).
Probab=99.79 E-value=5.4e-18 Score=128.81 Aligned_cols=128 Identities=20% Similarity=0.239 Sum_probs=99.1
Q ss_pred eEEEeCChhhHHHHHHhhhhcCC-----ccchh----HHH----HHHHhcC--CCeEEEEEecCCcEEEEEEEEEecCCC
Q 028270 2 VCIRKATVDDLLAMQACNLFCLP-----ENYQM----KYY----FYHILSW--PQLLYVAEDYNGRIVGYVLAKMEEESN 66 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~-----~~~~~----~~~----~~~~~~~--~~~~~v~~~~~g~ivG~~~~~~~~~~~ 66 (211)
+.||+++++|++.+.++....+. .+|.. ..+ ....... ....+++...+|++||++.+......
T Consensus 44 ~~lR~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~g~iiG~i~l~~~~~~- 122 (191)
T TIGR02382 44 PGARVATETDIPALRQLASAAFALSRFRAPWYAPDDSGRFYAQWVENAVRGTFDHQCLILRDASGDPRGYVTLRELNDT- 122 (191)
T ss_pred CcceeCChhhHHHHHHHHHHHhhccccCCCCcCHHHHHHHHHHHHHHHhcCCCCCeEEEEEccCCeEEEEEEEEecCCC-
Confidence 46999999999999999877642 12211 111 1222222 23344444447899999998765432
Q ss_pred ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 67 ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 67 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
..++..++|+|+|||+|||++|++.+++++++ .|+.+|++.|...|.+|++||+| +||+.++..
T Consensus 123 --~~~i~~l~V~p~~rGkG~G~~ll~~~~~~a~~-~g~~~I~l~v~~~N~~A~~~Y~k-lGF~~~~~~ 186 (191)
T TIGR02382 123 --DARIGLLAVFPGAQSRGIGAELMQTALNWCYA-RGLTRLRVATQMGNTAALRLYIR-SGANIESTA 186 (191)
T ss_pred --ceEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCCHHHHHHHHH-cCCccccce
Confidence 56888899999999999999999999999998 89999999999999999999999 999988854
No 11
>KOG3234 consensus Acetyltransferase, (GNAT) family [General function prediction only]
Probab=99.79 E-value=6.9e-19 Score=124.41 Aligned_cols=154 Identities=39% Similarity=0.651 Sum_probs=138.1
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
|-+|||.+..|+-..-.++.....+.++..+++..+...++.+.++...+++|.|+++...++....-++++..+.|.|+
T Consensus 1 Mtt~r~f~~~Dlf~fNninLDpltEt~~~~Fyl~yl~~~pe~~~~a~~p~~~imgyimgk~Eg~~~~wh~HvTAltVap~ 80 (173)
T KOG3234|consen 1 MTTIRPFTPQDLFKFNNINLDPLTETFPISFYLIYLAIWPEDFIVAEAPTGEIMGYIMGKVEGKDTEWHGHVTALTVAPD 80 (173)
T ss_pred CCccccccHHHHHhhccccccccccccceehhHHHHHhChHHhEeccCCCCceEEEEeeeccccCcceeeEEEEEEechh
Confidence 77899999999998888888888889999999999999999999999888999999999777655444788999999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC--CcceeeeeecccCCCC
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD--GEDAYDMRKQLKGKQS 156 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~--~~d~~~m~k~l~~~~~ 156 (211)
||+.|+|+.||+.+.+.... .+.-.+.|.|..+|.-|+.||++ +||..-.+...||.. .+|++-|+|.++-...
T Consensus 81 ~Rrl~la~~lm~~led~~d~-~~a~fvDLfVr~sN~iAI~mYkk-LGY~~YR~Vi~YY~~g~deda~dMRKalSrD~d 156 (173)
T KOG3234|consen 81 YRRLGLAAKLMDTLEDVSDV-DNAYFVDLFVRVSNQIAIDMYKK-LGYSVYRTVIEYYSVGPDEDAYDMRKALSRDVD 156 (173)
T ss_pred HHHHHHHHHHHHHHHHHHHh-hhhheeeeeeeccchhHHHHHHh-cCceEEEeeeeeeccCCCcchHhhhhhhccCcc
Confidence 99999999999999999888 68888999999999999999999 999999999999884 4799999999976553
No 12
>TIGR02406 ectoine_EctA L-2,4-diaminobutyric acid acetyltransferase. This enzyme family is the EctA of ectoine biosynthesis. Ectoine is a compatible solute, analagous to trehalose, betaines, etc., found often in halotolerant organisms. EctA is L-2,4-diaminobutyric acid acetyltransferase, also called DABA acetyltransferase.
Probab=99.78 E-value=5.2e-18 Score=124.93 Aligned_cols=127 Identities=20% Similarity=0.208 Sum_probs=97.2
Q ss_pred EEeCChhhHHHHHHhhhhcCCccchh-HHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCcc
Q 028270 4 IRKATVDDLLAMQACNLFCLPENYQM-KYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHR 82 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~~~~~~~~-~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 82 (211)
||+++.+|++.+.+|........... ..+..........++++.+.++++||++......... ...++..++|+|+||
T Consensus 1 IR~~~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~ivG~~~~~~~~~~~-~~~~i~~l~V~p~~r 79 (157)
T TIGR02406 1 FRPPRIEDGAGIWELVKDCPPLDLNSSYAYLLLCTDFADTSIVAESEGGEIVGFVSGYLRPDRP-DVLFVWQVAVDPRAR 79 (157)
T ss_pred CCCCccccHHHHHHHHHhCCCCCcccceehhhhhhhcCCcEEEEEcCCCeEEEEEEEEecCCCC-CeEEEEEEEEChHhc
Confidence 68999999999999988875432211 1111111123345666664478999998765443322 257888999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 83 KLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 83 g~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
|+|||++|++.+++++++ .++.++.+.|.+.|.+|++||+| +||+....
T Consensus 80 g~GiG~~L~~~l~~~a~~-~~~~~i~~~v~~~N~~a~~ly~k-~G~~~~~~ 128 (157)
T TIGR02406 80 GKGLARRLLEALLERVAC-ERVRHLETTITPDNQASRALFKA-LARRRGVH 128 (157)
T ss_pred cCcHHHHHHHHHHHHHHh-CCCCEEEEEEcCCCHHHHHHHHH-hCcccCCC
Confidence 999999999999999998 79999999999999999999999 99987553
No 13
>PRK10975 TDP-fucosamine acetyltransferase; Provisional
Probab=99.77 E-value=2e-17 Score=126.02 Aligned_cols=128 Identities=21% Similarity=0.275 Sum_probs=99.4
Q ss_pred EEEeCChhhHHHHHHhhhhcCC-----ccc-hh---HHHHHHH----hcC--CCeEEEEEecCCcEEEEEEEEEecCCCc
Q 028270 3 CIRKATVDDLLAMQACNLFCLP-----ENY-QM---KYYFYHI----LSW--PQLLYVAEDYNGRIVGYVLAKMEEESNE 67 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~~~-----~~~-~~---~~~~~~~----~~~--~~~~~v~~~~~g~ivG~~~~~~~~~~~~ 67 (211)
.||+++++|++.+.++....|. .+| .. ..+.... ... ...++++..+++++||++.+......
T Consensus 48 ~iR~a~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~~vG~~~l~~~~~~-- 125 (194)
T PRK10975 48 GARVATETDIPALRQLAAQAFAQSRFRAPWYAPDDSGRFYAQWIENAVRGTFDHQCLLLRDASGQIQGFVTLRELNDT-- 125 (194)
T ss_pred CcccCCcccHHHHHHHHHHHhhhccccCccCChhHHHHHHHHHHHHhhccccCCcEEEEEcCCCCEEEEEEEEecCCC--
Confidence 5899999999999999777543 122 11 1222221 111 22455666557899999988765332
Q ss_pred eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 68 CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 68 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
..+|..++|+|+|||+|+|++|+..+++++++ .|++++++.+...|.++++||+| +||+..+...
T Consensus 126 -~~~i~~~~V~p~~rg~Gig~~Ll~~~~~~a~~-~g~~~i~l~v~~~N~~a~~~yek-~Gf~~~~~~~ 190 (194)
T PRK10975 126 -DARIGLLAVFPGAQGRGIGARLMQAALNWCQA-RGLTRLRVATQMGNLAALRLYIR-SGANIESTAY 190 (194)
T ss_pred -ceEEEEEEEChhhcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeCCCcHHHHHHHHH-CCCeEeEEEe
Confidence 57888899999999999999999999999998 89999999999999999999999 9999988654
No 14
>PF13420 Acetyltransf_4: Acetyltransferase (GNAT) domain; PDB: 3DR8_A 3DR6_A 2AE6_B 2JLM_C 2J8R_A 1YVO_B 2J8M_A 2J8N_A 2BL1_A 3IWG_A ....
Probab=99.77 E-value=8.3e-17 Score=117.93 Aligned_cols=133 Identities=26% Similarity=0.312 Sum_probs=98.0
Q ss_pred EEeCChhhHHHHHHhhhhc-----CCccc------hhHHHHHHHh-cCCCeEEEEEecCCcEEEEEEEEEecCCCceeEE
Q 028270 4 IRKATVDDLLAMQACNLFC-----LPENY------QMKYYFYHIL-SWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGH 71 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~-----~~~~~------~~~~~~~~~~-~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 71 (211)
||+++++|++.+..+.+.. +.... ....++.... .....+|++...+|++||++.+....... ...
T Consensus 1 IR~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~iiG~~~~~~~~~~~--~~~ 78 (155)
T PF13420_consen 1 IRPATEEDLEEILKLYNEPRHEYFFTFEYPEDSEESFERWIESIIDSSKQRLFLVAEEDGKIIGYVSLRDIDPYN--HTA 78 (155)
T ss_dssp EEE--GGGHHHHHHHHHHHHHHTSSSSCSSHS-HHHHHHHHHHHHHHHTTEEEEEEECTTEEEEEEEEEESSSGT--TEE
T ss_pred CCCCcHHHHHHHHHHHhhhhhcceeEecCCCCCHHHHHHHHHHhcccCCCcEEEEEEcCCcEEEEEEEEeeeccC--CEE
Confidence 7999999999999987542 22111 1233344432 23455555554599999999998766533 444
Q ss_pred EEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecccc
Q 028270 72 ITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYA 139 (211)
Q Consensus 72 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~ 139 (211)
...+.|.|+||++|+|+.|+..++++++...|++++.+.|...|.++++||++ +||+..++.+.++.
T Consensus 79 ~~~~~v~~~~~~~gig~~l~~~l~~~af~~~~~~~i~~~v~~~N~~~i~~~~~-~GF~~~g~~~~~~~ 145 (155)
T PF13420_consen 79 ELSIYVSPDYRGKGIGRKLLDELIEYAFKELGIHKIYLEVFSSNEKAINFYKK-LGFEEEGELKDHIF 145 (155)
T ss_dssp EEEEEEEGGGTTSSHHHHHHHHHHHHH-HHTT-CEEEEEEETT-HHHHHHHHH-TTEEEEEEEEEEEE
T ss_pred EEeeEEChhHCCCcHHHHHHHHHHHHhhhccCeEEEEEEEecCCHHHHHHHHh-CCCEEEEEEecEEE
Confidence 44588889999999999999999999944499999999999999999999999 99999999888543
No 15
>PTZ00330 acetyltransferase; Provisional
Probab=99.76 E-value=2.6e-17 Score=119.50 Aligned_cols=126 Identities=19% Similarity=0.204 Sum_probs=92.0
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCcc-chhHH---HHHHHh-cCC-CeEEEEEecCCcEEEEEEEEEecCC---CceeEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPEN-YQMKY---YFYHIL-SWP-QLLYVAEDYNGRIVGYVLAKMEEES---NECHGHI 72 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~-~~~~~---~~~~~~-~~~-~~~~v~~~~~g~ivG~~~~~~~~~~---~~~~~~i 72 (211)
+.||+++++|++.+.++.......+ ..... +..... ... ..++++. .+|++||++.+...... ....++|
T Consensus 7 ~~ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~vG~~~~~~~~~~~~~~~~~~~i 85 (147)
T PTZ00330 7 LELRDLEEGDLGSVLELLSHLTSAPALSQEELEQIAARRRLAGVVTRVFVHS-PTQRIVGTASLFVEPKFTRGGKCVGHI 85 (147)
T ss_pred EEEEEcccccHHHHHHHHHHhcCCCccchhHHHHHHHHHhcCCCceEEEEEe-CCCEEEEEEEEEeccccccCCCceEEE
Confidence 7899999999999999876654322 22222 211111 111 2234433 48899999988654321 1124688
Q ss_pred EEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 73 TSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 73 ~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
..++|+|+|||+|||++|++.+++++++ .++..+.+.+ |.+|++||++ +||+....
T Consensus 86 ~~~~V~~~~rg~Gig~~l~~~~~~~a~~-~~~~~l~l~~---n~~a~~~y~k-~GF~~~~~ 141 (147)
T PTZ00330 86 EDVVVDPSYRGQGLGRALISDLCEIARS-SGCYKVILDC---TEDMVAFYKK-LGFRACER 141 (147)
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEec---ChHHHHHHHH-CCCEEece
Confidence 8999999999999999999999999998 7988887764 7799999999 99998763
No 16
>PRK10809 ribosomal-protein-S5-alanine N-acetyltransferase; Provisional
Probab=99.76 E-value=9.1e-17 Score=122.25 Aligned_cols=149 Identities=13% Similarity=0.103 Sum_probs=108.0
Q ss_pred eEEEeCChhhHHHHHHhhhh--cCCccch---------h------HHHHHHHhcCCC-eEEEEEe-cCCcEEEEEEEEEe
Q 028270 2 VCIRKATVDDLLAMQACNLF--CLPENYQ---------M------KYYFYHILSWPQ-LLYVAED-YNGRIVGYVLAKME 62 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~--~~~~~~~---------~------~~~~~~~~~~~~-~~~v~~~-~~g~ivG~~~~~~~ 62 (211)
+.||+++++|++.+.++... .+-.+|. . ..++......+. ..|++.. .++++||++.+...
T Consensus 18 l~LR~~~~~Da~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~l~~~ 97 (194)
T PRK10809 18 LVVRLVHERDAWRLADYYAENRHFLKPWEPVRDESHCYPSGWQARLGMINEFHKQGSAFYFALLDPDEKEIIGVANFSNV 97 (194)
T ss_pred EEEEeCCHHHHHHHHHHHHhCHHhccCCCCCCcccccCHHHHHHHHHHHHHHHhcCcEEEEEEEECCCCeEEEEEEEEee
Confidence 57999999999999998654 2211111 1 111222223333 3455443 36799999998765
Q ss_pred cCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccc-cCC
Q 028270 63 EESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYY-ADG 141 (211)
Q Consensus 63 ~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~-~~~ 141 (211)
..... ......+.|.|+|||+|+|+.++..+++++++.+|+++|.+.|.+.|.+|+++|+| +||+..+..+.++ .++
T Consensus 98 ~~~~~-~~~eig~~i~~~~~G~G~~~ea~~~ll~~~~~~l~l~~i~~~v~~~N~~S~~l~ek-~Gf~~~g~~~~~~~~~g 175 (194)
T PRK10809 98 VRGSF-HACYLGYSLGQKWQGQGLMFEALQAAIRYMQRQQHMHRIMANYMPHNKRSGDLLAR-LGFEKEGYAKDYLLIDG 175 (194)
T ss_pred cCCCe-eeEEEEEEECHHHcCCCHHHHHHHHHHHHHHhcCCceEEEEEeeCCCHHHHHHHHH-CCCcEEeeeccccccCC
Confidence 43221 22344678999999999999999999999998679999999999999999999999 9999999877754 344
Q ss_pred --cceeeeeeccc
Q 028270 142 --EDAYDMRKQLK 152 (211)
Q Consensus 142 --~d~~~m~k~l~ 152 (211)
.|.++|.+...
T Consensus 176 ~~~d~~~~~~~~~ 188 (194)
T PRK10809 176 QWRDHVLTALTTP 188 (194)
T ss_pred eEEEEEEeeeehh
Confidence 47788877543
No 17
>PRK15130 spermidine N1-acetyltransferase; Provisional
Probab=99.75 E-value=1.2e-16 Score=120.69 Aligned_cols=148 Identities=18% Similarity=0.223 Sum_probs=111.0
Q ss_pred eEEEeCChhhHHHHHHhhhhc------CCccch----hHHHHHHHh-cCCCeEEEEEecCCcEEEEEEEEEecCCCceeE
Q 028270 2 VCIRKATVDDLLAMQACNLFC------LPENYQ----MKYYFYHIL-SWPQLLYVAEDYNGRIVGYVLAKMEEESNECHG 70 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~------~~~~~~----~~~~~~~~~-~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~ 70 (211)
+.||+++++|++.+.++.... +..++. ...++.... ......|++.. +|++||++.+........ .+
T Consensus 7 l~lR~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~-~g~~iG~~~~~~~~~~~~-~~ 84 (186)
T PRK15130 7 VKLRPLEREDLRFVHQLDNNASVMRYWFEEPYEAFVELSDLYDKHIHDQSERRFVVEC-DGEKAGLVELVEINHVHR-RA 84 (186)
T ss_pred eEEecCCHHHHHHHHHHhcChHHHhhcCCcccccHHHHHHHHHHhhhcccCcEEEEEE-CCEEEEEEEEEeecCCCC-eE
Confidence 679999999999999885442 111211 111222222 33445677766 899999998876543321 34
Q ss_pred EEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecccc-CC--cceeee
Q 028270 71 HITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYA-DG--EDAYDM 147 (211)
Q Consensus 71 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~-~~--~d~~~m 147 (211)
.+ .++|+|+|||+|+|++++..+++++++..++++|++.|...|.+|++||+| +||+..+..+.++. ++ .|.++|
T Consensus 85 ~~-~~~v~~~~~g~G~g~~l~~~l~~~~~~~~~~~rv~~~v~~~N~~s~~~yek-~GF~~~~~~~~~~~~~g~~~d~~~~ 162 (186)
T PRK15130 85 EF-QIIISPEYQGKGLATRAAKLAMDYGFTVLNLYKLYLIVDKENEKAIHIYRK-LGFEVEGELIHEFFINGEYRNTIRM 162 (186)
T ss_pred EE-EEEECHHHcCCCHHHHHHHHHHHHHhhcCCceEEEEEEccCCHHHHHHHHH-CCCEEEEEEeheEEECCEEEEEEEE
Confidence 44 699999999999999999999999987689999999999999999999999 99999998877543 44 477788
Q ss_pred eecccC
Q 028270 148 RKQLKG 153 (211)
Q Consensus 148 ~k~l~~ 153 (211)
.+.-.+
T Consensus 163 ~~~~~~ 168 (186)
T PRK15130 163 CIFQHQ 168 (186)
T ss_pred EeeHHH
Confidence 776655
No 18
>COG1247 Sortase and related acyltransferases [Cell envelope biogenesis, outer membrane]
Probab=99.75 E-value=1.9e-16 Score=116.04 Aligned_cols=152 Identities=22% Similarity=0.164 Sum_probs=118.1
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCc--------cchhHHHHHHHh---cCCCeEEEEEecCCcEEEEEEEEEecCCCc-e
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPE--------NYQMKYYFYHIL---SWPQLLYVAEDYNGRIVGYVLAKMEEESNE-C 68 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~--------~~~~~~~~~~~~---~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~-~ 68 (211)
|+.||+++..|++.+..+.+..+.. +-+...+..... ......+++..++|+++|++.+........ +
T Consensus 1 ~~~ir~~~~~Dl~~I~~IY~~~v~~~~a~~e~~~~~~~~~~~~~~~~~~~g~p~~V~~~~~g~v~G~a~~~~fr~r~ay~ 80 (169)
T COG1247 1 EMEIRPATAADLEAILEIYNGAVENTAATFEEDPVSLEERAAWFSGRTRDGYPVVVAEEEDGKVLGYASAGPFRERPAYR 80 (169)
T ss_pred CcEEecChHHhHHHHHHHHHHhhhcceEEEeccCCCHHHHHHHHHhcccCCceEEEEEcCCCeEEEEEEeeeccCccccc
Confidence 6899999999999999998776521 223333332222 222356667665699999998877655443 3
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecc-ccCC--ccee
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKY-YADG--EDAY 145 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~-~~~~--~d~~ 145 (211)
.....+++|+|+.||+|+|++||+.+++.+.+ +|+..+...+...|.+++++.++ +||+..+..+.. +..+ -|..
T Consensus 81 ~tve~SiYv~~~~~g~GiG~~Ll~~Li~~~~~-~g~~~lva~I~~~n~aSi~lh~~-~GF~~~G~~~~vg~k~g~wld~~ 158 (169)
T COG1247 81 HTVELSIYLDPAARGKGLGKKLLQALITEARA-LGVRELVAGIESDNLASIALHEK-LGFEEVGTFPEVGDKFGRWLDLV 158 (169)
T ss_pred eEEEEEEEECcccccccHHHHHHHHHHHHHHh-CCeEEEEEEEcCCCcHhHHHHHH-CCCEEeccccccccccceEEeee
Confidence 55677999999999999999999999999999 89999999999999999999999 999999988774 2223 3778
Q ss_pred eeeecccCC
Q 028270 146 DMRKQLKGK 154 (211)
Q Consensus 146 ~m~k~l~~~ 154 (211)
.|.+.++..
T Consensus 159 ~~~~~l~~~ 167 (169)
T COG1247 159 LMQLLLEEG 167 (169)
T ss_pred eeehhhccc
Confidence 888887653
No 19
>PRK10151 ribosomal-protein-L7/L12-serine acetyltransferase; Provisional
Probab=99.74 E-value=2.4e-16 Score=118.37 Aligned_cols=147 Identities=11% Similarity=0.123 Sum_probs=108.5
Q ss_pred eEEEeCChhhHHHHHHhhhh--c-------CCcc-ch---hHHHHHHHh---cCC-CeEEEEEecCCcEEEEEEEEEecC
Q 028270 2 VCIRKATVDDLLAMQACNLF--C-------LPEN-YQ---MKYYFYHIL---SWP-QLLYVAEDYNGRIVGYVLAKMEEE 64 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~--~-------~~~~-~~---~~~~~~~~~---~~~-~~~~v~~~~~g~ivG~~~~~~~~~ 64 (211)
+.||+++++|++.+..+... . ++.+ .+ ...++.... ... ...|++.. ++++||++.+.....
T Consensus 11 l~Lr~~~~~D~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~i~~-~~~~iG~~~l~~~~~ 89 (179)
T PRK10151 11 LELHAVDESHVTPLHQLVCKNKTWLQQSLNWPQFVQSEEDTRKTVQGNVMLHQRGYAKMFMIFK-EDELIGVLSFNRIEP 89 (179)
T ss_pred EEEEeCCHHHHHHHHHHHHHhHHHHHhcCCCcCccCCHHHHHHHHHHHHHHHhcCCcEEEEEEE-CCEEEEEEEEEeecc
Confidence 57999999999999888632 1 1111 11 222333221 122 23566665 899999998876544
Q ss_pred CCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecc-ccCC--
Q 028270 65 SNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKY-YADG-- 141 (211)
Q Consensus 65 ~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~-~~~~-- 141 (211)
... .+.+ .+.++|+|||+|+|++++..+++++++..+++++.+.+...|.+++++|+| +||+..++.+.. +.++
T Consensus 90 ~~~-~~~i-g~~i~~~~~g~G~~tea~~~l~~~~~~~~~~~ri~~~v~~~N~~S~~v~ek-~Gf~~~g~~~~~~~~~g~~ 166 (179)
T PRK10151 90 LNK-TAYI-GYWLDESHQGQGIISQALQALIHHYAQSGELRRFVIKCRVDNPASNQVALR-NGFTLEGCLKQAEYLNGAY 166 (179)
T ss_pred CCC-ceEE-EEEEChhhcCCcHHHHHHHHHHHHHHhhCCccEEEEEEcCCCHHHHHHHHH-CCCEEEeEeccceEECCEE
Confidence 322 4455 567899999999999999999999997678999999999999999999999 999999988774 3334
Q ss_pred cceeeeeeccc
Q 028270 142 EDAYDMRKQLK 152 (211)
Q Consensus 142 ~d~~~m~k~l~ 152 (211)
.|.++|.+.+.
T Consensus 167 ~D~~~~~~~~~ 177 (179)
T PRK10151 167 DDVNLYARIID 177 (179)
T ss_pred EEEEEEEEeec
Confidence 58888888654
No 20
>KOG3216 consensus Diamine acetyltransferase [Amino acid transport and metabolism]
Probab=99.74 E-value=1.5e-16 Score=112.18 Aligned_cols=130 Identities=18% Similarity=0.076 Sum_probs=103.8
Q ss_pred eEEEeCChhhHHHHHHhhhhc-------CCccchhHHHHHHHhcCC--CeEEEEEe--cCCcEEEEEEEEEecCCCc--e
Q 028270 2 VCIRKATVDDLLAMQACNLFC-------LPENYQMKYYFYHILSWP--QLLYVAED--YNGRIVGYVLAKMEEESNE--C 68 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~-------~~~~~~~~~~~~~~~~~~--~~~~v~~~--~~g~ivG~~~~~~~~~~~~--~ 68 (211)
+.||.++++|.+.+.+|+++. .+..-+...+....+.++ ..++++.. .++.++|++...+.-..+. .
T Consensus 4 ~~IR~at~~D~~~i~rLikela~Fek~~~~v~~te~~l~~~~F~d~~~~~~~v~~ie~~~~~~aGf~~yf~~ystW~~k~ 83 (163)
T KOG3216|consen 4 IRIRLATPKDCEDILRLIKELAEFEKLEDQVEATEENLARDGFIDPPFKHWLVAAIETSGEVVAGFALYFNNYSTWLGKQ 83 (163)
T ss_pred eEEEecCcccHHHHHHHHHHHHHHHHhccchhhchhhhhhhhccCCCccEEEEEEEecCCCceeEEeeeecccccccccc
Confidence 789999999999999987652 233334445545434333 23444433 3679999998877655543 4
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
..|+..++|.|+|||+|+|+.|++.+-+.+.+ .|+.++++.|..-|.+|+.||++ .|++....
T Consensus 84 ~iYleDlyV~e~yR~kG~Gs~Ll~~va~~A~~-~G~~rv~w~vldwN~rAi~lY~k-~gaq~l~~ 146 (163)
T KOG3216|consen 84 GIYLEDLYVREQYRGKGIGSKLLKFVAEEADK-LGTPRVEWVVLDWNHRAILLYEK-VGAQDLKE 146 (163)
T ss_pred eEEEEeeEecchhcccChHHHHHHHHHHHHHH-cCCCcEEEEEeccchhHHHHHHH-hCccccce
Confidence 78999999999999999999999999999999 89999999999999999999999 99998775
No 21
>PF13527 Acetyltransf_9: Acetyltransferase (GNAT) domain; PDB: 3SXN_C 2I00_D 1M4D_B 1M44_A 1M4G_B 1M4I_A 2OZG_A 2HV2_F 3N7Z_A 3RYO_B ....
Probab=99.74 E-value=1.5e-16 Score=112.74 Aligned_cols=120 Identities=25% Similarity=0.247 Sum_probs=90.9
Q ss_pred EEEeCChhhHHHHHHhhhhcCCccchhH---HHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecC----CCceeEEEEEE
Q 028270 3 CIRKATVDDLLAMQACNLFCLPENYQMK---YYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEE----SNECHGHITSL 75 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~~~~~~~~~---~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~----~~~~~~~i~~l 75 (211)
.||+++++|.+++.+|...+|+...... .+..... .+..++++.+ +++|||++.+.+..- ...+.+++..+
T Consensus 1 ~iR~~~~~d~~~i~~l~~~~F~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~ivg~~~~~~~~~~~~g~~~~~~~i~~v 78 (127)
T PF13527_consen 1 EIRPLTESDFEQIIELFNEAFGDSESPPEIWEYFRNLY-GPGRCVVAED-DGKIVGHVGLIPRRLSVGGKKFKAAYIGDV 78 (127)
T ss_dssp -EEEE-GGGHHHHHHHHHHHTTT-CHHHHHHHHHHHHH-HTTEEEEEEE-TTEEEEEEEEEEEEEEETTEEEEEEEEEEE
T ss_pred CceECCHHHHHHHHHHHHHHCCCCCCchhhhhhhhccc-CcCcEEEEEE-CCEEEEEEEEEEEEEEECCEEEEEEEEEEE
Confidence 4899999999999999999998765543 2222332 3567888887 999999998876511 11247899999
Q ss_pred EEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEe
Q 028270 76 AVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIH 131 (211)
Q Consensus 76 ~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~ 131 (211)
+|+|+|||+|+|++||+++++.+++ .|...+.+.. .+ ..||++ +||+.+
T Consensus 79 ~v~p~~R~~Gl~~~L~~~~~~~~~~-~g~~~~~l~~--~~---~~~Y~~-~G~~~~ 127 (127)
T PF13527_consen 79 AVDPEYRGRGLGRQLMRALLERARE-RGVPFIFLFP--SS---PPFYRR-FGFEYA 127 (127)
T ss_dssp EE-GGGTTSSHHHHHHHHHHHHHHH-TT-SEEEEE---SS---HHHHHH-TTEEEE
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHh-CCCCEEEEec--CC---hhhhhc-CCCEEC
Confidence 9999999999999999999999998 7998777654 22 689999 999863
No 22
>PRK07922 N-acetylglutamate synthase; Validated
Probab=99.73 E-value=1.3e-16 Score=118.93 Aligned_cols=123 Identities=17% Similarity=0.213 Sum_probs=92.4
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
++.||+++++|.+.+..+..................+.+...++++..+++++||++.+...... .+.|..++|+|+
T Consensus 5 ~i~iR~a~~~D~~~i~~L~~~~~~~~~~~~~~~~~~~~~~~~~~va~~~~~~iiG~~~~~~~~~~---~~~i~~l~V~p~ 81 (169)
T PRK07922 5 AITVRRARTSDVPAIKRLVDPYAQGRILLEKNLVTLYEAVQEFWVAEHLDGEVVGCGALHVMWED---LAEIRTVAVDPA 81 (169)
T ss_pred CceeecCCHhhHHHHHHHHHHHhhcCccccchHHHHHhhcCcEEEEEecCCcEEEEEEEeecCCC---ceEEEEEEECHH
Confidence 47899999999999999976644322111111112223334566776248999999987654332 567889999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
|||+|+|++||+++++++++ .|+..+++.+.. ++||+| +||+..+.
T Consensus 82 ~rgkGiG~~Ll~~~~~~a~~-~g~~~l~~~~~~-----~~fY~k-~GF~~~~~ 127 (169)
T PRK07922 82 ARGRGVGHAIVERLLDVARE-LGLSRVFVLTFE-----VEFFAR-HGFVEIDG 127 (169)
T ss_pred HhCCCHHHHHHHHHHHHHHH-cCCCEEEEEecc-----HHHHHH-CCCEECcc
Confidence 99999999999999999998 899999876642 689999 99998763
No 23
>PRK10514 putative acetyltransferase; Provisional
Probab=99.73 E-value=2.1e-16 Score=114.52 Aligned_cols=132 Identities=20% Similarity=0.238 Sum_probs=92.7
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCC------ccchhHH---HHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLP------ENYQMKY---YFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGH 71 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~------~~~~~~~---~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 71 (211)
|+.||+++++|++.+.++....+. .+..... .+..... ...++++...++++||++.+.. ..
T Consensus 1 m~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~iG~~~~~~--------~~ 71 (145)
T PRK10514 1 MISIRRSRHEEGERLVAIWRRSVDATHDFLSAEDRAEIEELVRSFLP-EAPLWVAVDERDQPVGFMLLSG--------GH 71 (145)
T ss_pred CceeeecchhhHHHHHHHHHHHHHHhCcccCchhHHHHHHHHHHHhc-cCceEEEEecCCcEEEEEEEec--------Cc
Confidence 899999999999999998765321 1122211 2222222 2334555434789999988742 23
Q ss_pred EEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC-Ccceeeee
Q 028270 72 ITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD-GEDAYDMR 148 (211)
Q Consensus 72 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~-~~d~~~m~ 148 (211)
+..++|+|+|||+|+|++||+.+++.+ +++.+.+...|.++++||+| +||+..+....-..+ ..+.+.|.
T Consensus 72 ~~~~~v~p~~rgkGig~~Ll~~~~~~~------~~i~~~v~~~N~~a~~~yek-~Gf~~~~~~~~~~~~~~~~~~~~~ 142 (145)
T PRK10514 72 MEALFVDPDVRGCGVGRMLVEHALSLH------PELTTDVNEQNEQAVGFYKK-MGFKVTGRSEVDDQGRPYPLLHLA 142 (145)
T ss_pred EeEEEECHHhccCCHHHHHHHHHHHhc------cccEEEeecCCHHHHHHHHH-CCCEEecccccCCCCCccceEEEE
Confidence 567999999999999999999988753 34788899999999999999 999999865542221 23445553
No 24
>PRK07757 acetyltransferase; Provisional
Probab=99.73 E-value=9.5e-17 Score=117.38 Aligned_cols=122 Identities=25% Similarity=0.310 Sum_probs=92.0
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
||.||+++++|++.+.++.....+..+...............++++.. ++++||++.+...... ..+|..++|+|+
T Consensus 1 ~~~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~-~~~lvG~~~l~~~~~~---~~~i~~v~V~p~ 76 (152)
T PRK07757 1 MMEIRKARLSDVKAIHALINVYAKKGLMLPRSLDELYENIRDFYVAEE-EGEIVGCCALHILWED---LAEIRSLAVSED 76 (152)
T ss_pred CceEeeCCcccHHHHHHHHHHHHhcCCccCCCHHHHHhccCcEEEEEE-CCEEEEEEEEEeccCC---ceEEEEEEECHH
Confidence 799999999999999999766433222111111122222234566665 8999999998765432 568889999999
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
|||+|+|++|+..+++.+.+ .|+..+++.+. +.+||+| +||+..+.
T Consensus 77 ~rg~Glg~~Ll~~l~~~a~~-~g~~~i~~~~~-----~~~~Y~k-~GF~~~~~ 122 (152)
T PRK07757 77 YRGQGIGRMLVEACLEEARE-LGVKRVFALTY-----QPEFFEK-LGFREVDK 122 (152)
T ss_pred HcCCCHHHHHHHHHHHHHHh-CCCCeEEEEeC-----cHHHHHH-CCCEEccc
Confidence 99999999999999999988 79998876553 3689999 99999875
No 25
>TIGR03103 trio_acet_GNAT GNAT-family acetyltransferase TIGR03103. Members of this protein family belong to the GNAT family of acetyltransferases. Each is part of a conserved three-gene cassette sparsely distributed across at least twenty different species known so far, including alpha, beta, and gamma Proteobacteria, Mycobacterium, and Prosthecochloris, which is a member of the Chlorobi. The other two members of the cassette are a probable protease and an asparagine synthetase family protein.
Probab=99.73 E-value=2.7e-16 Score=136.42 Aligned_cols=133 Identities=24% Similarity=0.273 Sum_probs=104.8
Q ss_pred eEEEeC-ChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEe-cCCcEEEEEEEEEecC---CCceeEEEEEEE
Q 028270 2 VCIRKA-TVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAED-YNGRIVGYVLAKMEEE---SNECHGHITSLA 76 (211)
Q Consensus 2 i~ir~~-~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~g~ivG~~~~~~~~~---~~~~~~~i~~l~ 76 (211)
+.||++ ++.|++.+.++.+.....++....+..........++++.+ .+|++||++.+..... ......++..++
T Consensus 83 ~~IR~~~~~~D~~~I~~L~~~~~~~p~~~~~~~~~~~~~~~~~~vA~~~~~g~IVG~~~~~~~~~~~~d~~~~~~i~~l~ 162 (547)
T TIGR03103 83 FTVRRLRGPADVDAINRLYAARGMVPVRVDFVLDHRHSRAITYLVAEDEASGAIIGTVMGVDHRKAFNDPEHGSSLWCLA 162 (547)
T ss_pred cEEEeCCChhHHHHHHHHHHhcCCCCCCHHHHHHHhcCCCceEEEEEECCCCeEEEEEEEEeccccccCCCCCeEEEEEE
Confidence 789997 68999999999988765555555544333333455677764 3689999997643211 111246788999
Q ss_pred EcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 77 VLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
|+|+|||+|||++||+++++++++ .|+..+++.|...|.+|++||+| +||+.+.....
T Consensus 163 V~P~~Rg~GIG~~Ll~~l~e~a~~-~G~~~i~L~V~~~N~~Ai~fY~k-lGf~~~~~y~~ 220 (547)
T TIGR03103 163 VDPQAAHPGVGEALVRALAEHFQS-RGCAYMDLSVMHDNEQAIALYEK-LGFRRIPVFAL 220 (547)
T ss_pred ECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEcCCCHHHHHHHHH-CCCEEeeEEEE
Confidence 999999999999999999999998 89999999999999999999999 99998875543
No 26
>PF13523 Acetyltransf_8: Acetyltransferase (GNAT) domain; PDB: 2VQY_A 2BUE_A 1V0C_A 1YK3_D 2PR8_A 2QIR_A 2PRB_A 2QML_A 2PC1_A.
Probab=99.72 E-value=1.1e-15 Score=111.81 Aligned_cols=130 Identities=24% Similarity=0.262 Sum_probs=94.6
Q ss_pred EEeCC-hhhHHHHHHhhhhc----C-Cccc---hhHHHHHHHhcCCC-eEEEEEecCCcEEEEEEEEEecCCC---ceeE
Q 028270 4 IRKAT-VDDLLAMQACNLFC----L-PENY---QMKYYFYHILSWPQ-LLYVAEDYNGRIVGYVLAKMEEESN---ECHG 70 (211)
Q Consensus 4 ir~~~-~~D~~~l~~l~~~~----~-~~~~---~~~~~~~~~~~~~~-~~~v~~~~~g~ivG~~~~~~~~~~~---~~~~ 70 (211)
||+++ .+|++.|.++.+.. + ...+ ....+...+...+. ..+|+.. +|+++|++.+....... ....
T Consensus 1 ~R~a~~~~Dl~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~v~~~-dg~~~g~~~~~~~~~~~~~~~~~~ 79 (152)
T PF13523_consen 1 LRPATTPDDLPLILQWLNQPHVREFWDQDPSQEWVEEYPEQLEADPGHHPYVAED-DGEPIGYFEIYWPDEDYDADDGDR 79 (152)
T ss_dssp EEE---GGGHHHHHHHHTSHHHHCCH-CCCTHHHHHHHHHHHCHTTTEEEEEEEE-TTEEEEEEEEEEGGGSS---TTEE
T ss_pred CeeCccHHHHHHHHHHHHhHHHHHHccCCCCHHHHHHHHhhhcccCCceEEEEEE-CCEEEEEEEEecccccccCCCCEE
Confidence 79999 99999999986553 2 1222 23333343323444 4677776 99999999886532221 1256
Q ss_pred EEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 71 HITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 71 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
.+..++++++|||+|+|+.++..+++.+++..++++|.+.+.+.|.+|+++|+| +||+.+++..
T Consensus 80 ~~~~~~~~~~~rg~G~g~~~~~~~~~~~~~~~~~~~i~~~~~~~N~~~~~~~~k-~GF~~~g~~~ 143 (152)
T PF13523_consen 80 GIHRLIVDPEYRGQGLGKAMLRALIEFLFEDPGVDRIVLDPHEDNTRAIRLYEK-AGFRKVGEFE 143 (152)
T ss_dssp EEEEEESTGGGTTSSHHHHHHHHHHHHHHTSTT--EEEEEEBTT-HHHHHHHHH-TT-EEEEEEE
T ss_pred EEeeeeechhhcCCCHHHHHHHHHHHHHHhCCCCCEEEEecCcCCHHHHHHHHH-cCCEEeeEEE
Confidence 688889999999999999999999999998458999999999999999999999 9999999775
No 27
>TIGR03585 PseH pseudaminic acid biosynthesis N-acetyl transferase. Sequences in this family are members of the pfam00583 (GNAT) superfamily of acetyltransferases and are proposed to perform a N-acetylation step in the process of pseudaminic acid biosynthesis in Campylobacter species. This gene is commonly observed in apparent operons with other genes responsible for the biosynthesis of pseudaminic acid and as a component of flagellar and exopolysaccharide biosynthesis loci. Significantly, many genomes containing other components of this pathway lack this gene, indicating that some other N-acetyl transferases may be incolved and/or the step is optional, resulting in a non-acetylated pseudaminic acid variant sugar.
Probab=99.72 E-value=4.7e-16 Score=113.98 Aligned_cols=140 Identities=15% Similarity=0.165 Sum_probs=103.4
Q ss_pred EEEeCChhhHHHHHHhhhhc------CCcc-ch---hHHHHHHHhcCCC-eEEEEEecCCcEEEEEEEEEecCCCceeEE
Q 028270 3 CIRKATVDDLLAMQACNLFC------LPEN-YQ---MKYYFYHILSWPQ-LLYVAEDYNGRIVGYVLAKMEEESNECHGH 71 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~------~~~~-~~---~~~~~~~~~~~~~-~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~ 71 (211)
.|||++++|++.+.++.... +..+ .+ ...++.....++. .++++.. +|++||++.+........ ...
T Consensus 2 ~lr~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~vG~~~~~~~~~~~~-~~~ 79 (156)
T TIGR03585 2 NFTPLNSEELELVLEWRNHPDVRANMYSDHLIDWEEHLHFIEALKQDPNRRYWIVCQ-ESRPIGVISFTDINLVHK-SAF 79 (156)
T ss_pred CcccCCHHHHHHHHHhhCCHHHHhhccCcCCCCHHHHHHHHHHhhcCCCceEEEEEE-CCEEEEEEEEEecChhhC-eEE
Confidence 48999999999999875432 1111 21 2334455544443 4556555 899999999976553221 344
Q ss_pred EEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecc-ccCC--cceeee
Q 028270 72 ITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKY-YADG--EDAYDM 147 (211)
Q Consensus 72 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~-~~~~--~d~~~m 147 (211)
+. +.+.|.+| +|||++++..+++++++..+++++++.+...|.++++||+| +||+..+..+.+ +.+| .|.++|
T Consensus 80 ~g-~~~~~~~~-~G~g~~~~~~~~~~a~~~~~~~~i~~~v~~~N~~s~~~y~k-~Gf~~~g~~~~~~~~~g~~~d~~~~ 155 (156)
T TIGR03585 80 WG-IYANPFCK-PGVGSVLEEAALEYAFEHLGLHKLSLEVLEFNNKALKLYEK-FGFEREGVFRQGIFKEGEYYDVLLM 155 (156)
T ss_pred EE-EEeChhhh-cCchHHHHHHHHHHHHhhCCeeEEEEEEeccCHHHHHHHHH-cCCeEeeeehhheeECCeEEEEEEe
Confidence 53 45899999 99999999999999987579999999999999999999999 999999988874 3333 355555
No 28
>PF00583 Acetyltransf_1: Acetyltransferase (GNAT) family; InterPro: IPR000182 The N-acetyltransferases (NAT) (EC 2.3.1.-) are enzymes that use acetyl coenzyme A (CoA) to transfer an acetyl group to a substrate, a reaction implicated in various functions from bacterial antibiotic resistance to mammalian circadian rhythm and chromatin remodeling. The Gcn5-related N-acetyltransferases (GNAT) catalyze the transfer of the acetyl from the CoA donor to a primary amine of the acceptor. The GNAT proteins share a domain composed of four conserved sequence motifs A-D [, ]. This GNAT domain is named after yeast GCN5 (from General Control Nonrepressed) and related histone acetyltransferases (HATs) like Hat1 and PCAF. HATs acetylate lysine residues of amino terminal histone tails, resulting in transcription activation. Another category of GNAT, the aminoglycoside N-acetyltransferases, confer antibiotic resistance by catalyzing the acetylation of amino groups in aminoglycoside antibiotics []. GNAT proteins can also have anabolic and catabolic functions in both prokaryotes and eukaryotes [, , , , ]. The acetyltransferase/GNAT domain forms a structurally conserved fold of 6 to 7 beta strands (B) and 4 helices (H) in the topology B1-H1-H2-B2-B3-B4-H3-B5-H4-B6, followed by a C-terminal strand which may be from the same monomer or contributed by another [, ]. Motifs D (B2-B3), A (B4-H3) and B (B5-H4) are collectively called the HAT core [, , ], while the N-terminal motif C (B1-H1) is less conserved. Some proteins known to contain a GNAT domain: Yeast GCN5 and Hat1, which are histone acetyltransferases (EC 2.3.1.48). Human PCAF, a histone acetyltransferase. Mammalian serotonin N-acetyltransferase (SNAT) or arylalkylamine NAT (AANAT), which acetylates serotonin into a circadian neurohormone that may participate in light-dark rhythms, and human mood and behavior. Mammalian glucosamine 6-phosphate N-acetyltransferase (GNA1) (EC 2.3.1.4). Escherichia coli rimI and rimJ, which acetylate the N-terminal alanine of ribosomal proteins S18 and S5, respectively (EC 2.3.1.128). Mycobacterium tuberculosis aminoglycoside 2'-N-acetyltransferase (aac), which acetylates the 2' hydroxyl or amino group of a broad spectrum of aminoglycoside antibiotics. Bacillus subtilis bltD and paiA, which acetylate spermine and spermidine. This entry represents the entire GNAT domain.; GO: 0008080 N-acetyltransferase activity, 0008152 metabolic process; PDB: 3T9Y_A 2R7H_B 2OZH_A 1Y9W_B 1VKC_B 2OH1_C 3R9E_B 3R9G_B 3R9F_A 3R96_A ....
Probab=99.72 E-value=2.2e-16 Score=103.50 Aligned_cols=79 Identities=32% Similarity=0.436 Sum_probs=73.5
Q ss_pred cCCcEEEEEEEEEecCCC--ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhc
Q 028270 49 YNGRIVGYVLAKMEEESN--ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETL 126 (211)
Q Consensus 49 ~~g~ivG~~~~~~~~~~~--~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~ 126 (211)
++|+|||++.+....... .+..+|..++|+|+|||+|+|+.|++++++++++ .|+..+++.+.+.|..+++||+| +
T Consensus 3 ~~~~ivg~~~~~~~~~~~~~~~~~~i~~~~v~~~~r~~Gig~~L~~~~~~~~~~-~g~~~i~~~~~~~n~~~~~~~~k-~ 80 (83)
T PF00583_consen 3 EDGQIVGFASLRPPPEPFDHGNHAYIHRLAVDPEYRGQGIGSKLLQAAEEWARK-RGIKRIYLDVSPDNPAARRFYEK-L 80 (83)
T ss_dssp ETTEEEEEEEEEEEETTTTTTTEEEEEEEEECGGGTTSSHHHHHHHHHHHHHHH-TTESEEEEEEETTGHHHHHHHHH-T
T ss_pred CCCEEEEEEEEEECCCccccCCEEEEEEEEEcHHHhhCCCchhhhhhhhhhHHh-cCccEEEEEEeCCCHHHHHHHHH-c
Confidence 389999999999888752 2389999999999999999999999999999999 89999999999999999999999 9
Q ss_pred Cce
Q 028270 127 GYK 129 (211)
Q Consensus 127 GF~ 129 (211)
||+
T Consensus 81 Gf~ 83 (83)
T PF00583_consen 81 GFE 83 (83)
T ss_dssp TEE
T ss_pred CCC
Confidence 996
No 29
>PRK10314 putative acyltransferase; Provisional
Probab=99.70 E-value=1.7e-16 Score=116.35 Aligned_cols=139 Identities=16% Similarity=0.134 Sum_probs=100.9
Q ss_pred EeCChhhHHHHHHhhhhcCCccchhHHHHHHHhc--CCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCcc
Q 028270 5 RKATVDDLLAMQACNLFCLPENYQMKYYFYHILS--WPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHR 82 (211)
Q Consensus 5 r~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 82 (211)
..++.+++..+..+....|-.+............ .....+++.+ ++++||++.+........ ..+|..++|+|+||
T Consensus 10 ~~l~~~~~~~~~~lR~~VF~~eq~~~~~e~D~~d~~~~~~h~~~~~-~~~~vg~~r~~~~~~~~~-~~~i~rv~V~~~~r 87 (153)
T PRK10314 10 SELSVSQLYALLQLRCAVFVVEQNCPYQDIDGDDLTGDNRHILGWK-NDELVAYARILKSDDDLE-PVVIGRVIVSEALR 87 (153)
T ss_pred hhCCHHHHHHHHHHHHHHhhhhcCCCccccCCCCCCCCcEEEEEEE-CCEEEEEEEEecCCCCCC-CEEEEEEEECHHHh
Confidence 4567788888888888888544332211001111 1244556665 899999999987543221 57899999999999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecc
Q 028270 83 KLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQL 151 (211)
Q Consensus 83 g~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l 151 (211)
|+|+|++||+.+++++.+..+...++|.+. ..+..||+| +||+.++. .|...|...+.|.|.+
T Consensus 88 G~GiG~~Lm~~~~~~~~~~~~~~~i~L~a~---~~a~~fY~k-~GF~~~g~--~f~~~Gi~h~~M~~~~ 150 (153)
T PRK10314 88 GEKVGQQLMSKTLESCTRHWPDKPVYLGAQ---AHLQNFYQS-FGFIPVTE--VYEEDGIPHIGMAREV 150 (153)
T ss_pred CCCHHHHHHHHHHHHHHHHCCCCcEEEehH---HHHHHHHHH-CCCEECCC--ccccCCCCcHhhhhhh
Confidence 999999999999999987446777888753 467899999 99999884 4666677778887654
No 30
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.69 E-value=1.2e-15 Score=123.08 Aligned_cols=132 Identities=20% Similarity=0.234 Sum_probs=98.7
Q ss_pred eEEEeCC-hhhHHHHHHhhhhcCCc-----cchhHHHHHHHh---cCCCeEEEEEec-CCcEEEEEEEEEecCCCceeEE
Q 028270 2 VCIRKAT-VDDLLAMQACNLFCLPE-----NYQMKYYFYHIL---SWPQLLYVAEDY-NGRIVGYVLAKMEEESNECHGH 71 (211)
Q Consensus 2 i~ir~~~-~~D~~~l~~l~~~~~~~-----~~~~~~~~~~~~---~~~~~~~v~~~~-~g~ivG~~~~~~~~~~~~~~~~ 71 (211)
+.||+++ ..|.+.+..+....|.+ .|....+..... ..+..++++.++ ++++||++.+....... ...+
T Consensus 150 ~~~r~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~vG~~~~~~~~~~~-~~~~ 228 (292)
T TIGR03448 150 VTVRAYVGAPDDAEWLRVNNAAFAWHPEQGGWTRADLAERRAEPWFDPAGLFLAFDDAPGELLGFHWTKVHPDEP-ALGE 228 (292)
T ss_pred eEeeccCCCcchHHHHHHHHHHhhCCCccCCcCHHHHHHHhhCcCCCcCceEEEEECCCCcEEEEEEEEecCCCC-ceeE
Confidence 5688886 45888888887777642 244443332221 124456666653 58999997655433221 1467
Q ss_pred EEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 72 ITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 72 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
+..++|+|+|||+|||++|+..+++++++ .|...+.+.+...|..+++||+| +||+.......
T Consensus 229 i~~~~V~p~~rg~GiG~~ll~~~~~~~~~-~g~~~v~l~v~~~N~~a~~~y~k-~GF~~~~~~~~ 291 (292)
T TIGR03448 229 VYVVGVDPAAQGRGLGDALTLIGLHHLAA-RGLPAVMLYVEADNEAAVRTYEK-LGFTVAEVDVA 291 (292)
T ss_pred EEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEeCCCHHHHHHHHH-cCCEEcccccc
Confidence 77889999999999999999999999998 79999999999999999999999 99998875543
No 31
>PLN02706 glucosamine 6-phosphate N-acetyltransferase
Probab=99.69 E-value=2e-15 Score=110.10 Aligned_cols=126 Identities=21% Similarity=0.239 Sum_probs=91.5
Q ss_pred eEEEeCChhhHH-HHHHhhhhcCC-ccchhHHHHHH---Hhc-CCCe-EEEEEe-cCCcEEEEEEEEEecC---CCceeE
Q 028270 2 VCIRKATVDDLL-AMQACNLFCLP-ENYQMKYYFYH---ILS-WPQL-LYVAED-YNGRIVGYVLAKMEEE---SNECHG 70 (211)
Q Consensus 2 i~ir~~~~~D~~-~l~~l~~~~~~-~~~~~~~~~~~---~~~-~~~~-~~v~~~-~~g~ivG~~~~~~~~~---~~~~~~ 70 (211)
+.||+++.+|++ .+..+...... .+++...+... ... .... .+++.+ .++++||++.+..... .....+
T Consensus 7 ~~ir~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivG~~~~~~~~~~~~~~~~~~ 86 (150)
T PLN02706 7 FKVRRLEISDKSKGFLELLQQLTVVGDVTEEEFEARFQELASLGDDHLICVIEDAASGRIIATGSVFVERKFIRNCGKVG 86 (150)
T ss_pred eEEeEhhhcccchHHHHHHHhccCCCCCCHHHHHHHHHHHHhCCCcEEEEEEEeCCCCcEEEEEEEEEEeecccCCCcEE
Confidence 679999999998 47777655432 34543333322 222 2233 334432 1589999988753321 111256
Q ss_pred EEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 71 HITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 71 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+|..++|+|+|||+|||+.|++.+++++++ .|++++.+.+.+.|. +||+| +||+..+
T Consensus 87 ~i~~i~V~~~~rg~GiG~~ll~~~~~~a~~-~g~~~i~l~~~~~N~---~~y~k-~GF~~~g 143 (150)
T PLN02706 87 HIEDVVVDSAARGKGLGKKIIEALTEHARS-AGCYKVILDCSEENK---AFYEK-CGYVRKE 143 (150)
T ss_pred EEEEEEECHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEeccccH---HHHHH-CcCEEeh
Confidence 788899999999999999999999999998 899999999999885 59999 9999877
No 32
>TIGR01686 FkbH FkbH-like domain. The C-terminal portion of this domain is unique to this family (by BLAST).
Probab=99.68 E-value=1.7e-15 Score=123.85 Aligned_cols=122 Identities=12% Similarity=0.131 Sum_probs=98.2
Q ss_pred eEEEeCChhhHHHHHHhhhhc--CC---ccchhHHHHHHHhcCCCeEEEEEe----cCCcEEEEEEEEEecCCCceeEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFC--LP---ENYQMKYYFYHILSWPQLLYVAED----YNGRIVGYVLAKMEEESNECHGHI 72 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~--~~---~~~~~~~~~~~~~~~~~~~~v~~~----~~g~ivG~~~~~~~~~~~~~~~~i 72 (211)
++||++++.|++.+.+|.+.. |+ ..|+...+.. .+..+ ..+++.. .++.+||++.+..... ..+|
T Consensus 187 ~~Ir~a~~~Dl~ri~~L~~~tnqfn~~~~~~s~~~i~~-~l~~~-~~~~~~~~d~~gd~givG~~~~~~~~~----~~~I 260 (320)
T TIGR01686 187 LNISKNDEQNVQRVEELLGRTNQFNATYTRLNQEDVAQ-HMQKE-EIVTVSMSDRFGDSGIIGIFVFEKKEG----NLFI 260 (320)
T ss_pred EEEEECChhhhHHHHHHHHhHHhhhccCccCCHHHHHH-HhcCC-CEEEEEEEecCCCCceEEEEEEEecCC----cEEE
Confidence 789999999999999998887 53 3455554433 33444 3444432 2568999998876543 6789
Q ss_pred EEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEec--CcHHHHHHHhhhcCceEe
Q 028270 73 TSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRK--SNRAAFNLYTETLGYKIH 131 (211)
Q Consensus 73 ~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~--~N~~a~~~Y~k~~GF~~~ 131 (211)
..++|+|.+||+|+|++||.++++.+++ .|+..+++.+.+ .|.+|+.||++ +||+..
T Consensus 261 ~~l~vs~r~~grGig~~Ll~~l~~~a~~-~G~~~i~l~v~~~~~N~~A~~fY~~-~GF~~~ 319 (320)
T TIGR01686 261 DDLCMSCRALGRGVETRMLRWLFEQALD-LGNHNARLYYRRTERNMPFLSFYEQ-IGFEDE 319 (320)
T ss_pred EEEEEcHhHhcCcHHHHHHHHHHHHHHH-cCCCeEEEEEeeCCCchHHHHHHHH-cCCccC
Confidence 9999999999999999999999999999 899999998864 79999999999 999854
No 33
>PHA00673 acetyltransferase domain containing protein
Probab=99.68 E-value=2.3e-15 Score=108.80 Aligned_cols=123 Identities=14% Similarity=0.108 Sum_probs=94.8
Q ss_pred eCChhhHHHHHHhhhhcC-C----c---cchhHHHHHHHhcCCC-eEEEEEecCCcEEEEEEEEEecCCCc---eeEEEE
Q 028270 6 KATVDDLLAMQACNLFCL-P----E---NYQMKYYFYHILSWPQ-LLYVAEDYNGRIVGYVLAKMEEESNE---CHGHIT 73 (211)
Q Consensus 6 ~~~~~D~~~l~~l~~~~~-~----~---~~~~~~~~~~~~~~~~-~~~v~~~~~g~ivG~~~~~~~~~~~~---~~~~i~ 73 (211)
-++.+|++.|..|..+.- . + +.+....+..+..+++ .++++.+ +|++||++.+........ +.+.|.
T Consensus 11 ~A~~~D~paI~~LLadd~l~~~r~d~~~~~~y~~af~ai~~dp~~~llVa~~-~g~vVG~~~l~~~p~l~~~~~~~~~Ie 89 (154)
T PHA00673 11 FAELADAPTFASLCAEYAHESANADLAGRAPDHHAYAGMEAAGVAHFLGVFR-GEELVGFACLLVTPVPHFKGQLIGTTE 89 (154)
T ss_pred hccHhhHHHHHHHHHhcccccccccccccchhHHHHHHHHhCCCcEEEEEEE-CCEEEEEEEEEEecCCccCCccEEEEE
Confidence 468999999999965521 0 1 1111222455655654 5666665 899999998877764422 467899
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.+.|+|++||+|||++||+++++++++ .|+..+++...++. +.+.||.+ +|++...
T Consensus 90 ~l~V~~~~RGqGIG~~Ll~~A~~~Ar~-~Gc~~lyis~~p~~-~tv~fy~~-~g~~~~~ 145 (154)
T PHA00673 90 SIFVAAAHRPGGAGMALLRATEALARD-LGATGLYVSGPTEG-RLVQLLPA-AGYRETN 145 (154)
T ss_pred EEEEChhccCCCHHHHHHHHHHHHHHH-CCCCEEEEecCCCc-cchHHHHh-CCchhhc
Confidence 999999999999999999999999999 89999999887765 56999999 9999765
No 34
>PRK05279 N-acetylglutamate synthase; Validated
Probab=99.67 E-value=8.5e-16 Score=130.76 Aligned_cols=119 Identities=20% Similarity=0.194 Sum_probs=91.3
Q ss_pred eEEEeCChhhHHHHHHhhhhc----CCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFC----LPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV 77 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~----~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V 77 (211)
+.||+++.+|++.+.++.... +...+....+ ......++++.+ +++++|++.+....... .++|..++|
T Consensus 295 ~~IR~at~~D~~~I~~L~~~~~~~~~~~~~~~~~l----~~~~~~~~va~~-dg~iVG~~~~~~~~~~~--~~~I~~l~V 367 (441)
T PRK05279 295 EQLRRATIDDVGGILELIRPLEEQGILVRRSREQL----EREIDKFTVIER-DGLIIGCAALYPFPEEK--MGEMACLAV 367 (441)
T ss_pred HHeEeCCHHHHHHHHHHHHHHHHcCCccccCHHHH----hcccCcEEEEEE-CCEEEEEEEEEEcCCCC--eEEEEEEEE
Confidence 468999999999999986532 2222332222 122344666665 89999999877654332 678999999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+|+|||+|+|++||+++++++++ .|+..+++.. .+++.||++ +||+..+.
T Consensus 368 ~p~~Rg~GiG~~Ll~~l~~~a~~-~g~~~l~l~~----~~a~~fY~k-~GF~~~g~ 417 (441)
T PRK05279 368 HPDYRGSGRGERLLKRIEQRARQ-LGLKRLFVLT----TRTAHWFLE-RGFVPVDV 417 (441)
T ss_pred CHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEec----chHHHHHHH-CcCEECCh
Confidence 99999999999999999999998 8999887643 357999999 99999985
No 35
>KOG3138 consensus Predicted N-acetyltransferase [General function prediction only]
Probab=99.67 E-value=2e-16 Score=117.40 Aligned_cols=150 Identities=27% Similarity=0.297 Sum_probs=119.7
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCc--e-----eEEEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNE--C-----HGHIT 73 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~--~-----~~~i~ 73 (211)
|+.|+.+++.++..+..|...+||..+... |...........-+|.. ++..+|............ + ..+|.
T Consensus 16 ~~~l~~it~~nl~~~~~l~~~~fP~~y~~k-fy~~~~~~~~~~~~A~~-~~~~v~a~~~k~~~~~~~~~r~~~~~~~yi~ 93 (187)
T KOG3138|consen 16 LIELRLITPNNLKQLKQLNEDIFPISYVDK-FYPDVLSNGDLTQLAYY-NEIAVGAVACKLIKFVQNAKRLFGNRVIYIL 93 (187)
T ss_pred ceeeccCCcchHHHHHHHhccccCcchHHH-HHHHHHhcCCHHHhhhh-ccccccceeeeehhhhhhhhhhhccceeEEE
Confidence 578999999999999999999999998877 44666666666656655 555555555444433221 1 38899
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcC-CcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCC--cceeeeeec
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFG-AEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADG--EDAYDMRKQ 150 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g-~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~--~d~~~m~k~ 150 (211)
.++|++.||.+|||+.||+.+.+++.+ .. ++.+++++...|..++.||++ .||+.+.....||... .++..|.+.
T Consensus 94 ~Lgvl~~yR~~gIGs~Ll~~~~~~~~~-~~~~~~v~lHv~~~n~~ai~~Y~~-~gF~~~~~~~~~y~~~~~~~~~~l~~~ 171 (187)
T KOG3138|consen 94 SLGVLPRYRNKGIGSKLLEFVKKYCSE-AHQCRRVYLHVQAVNESAIEFYEK-RGFEIVERLKNYYSILGPPDDSFLRKL 171 (187)
T ss_pred eecccHHHHhcchHHHHHHHHHHHHhc-ccccceEEEEEEeCCCcHHHHHHh-cCceEeeccccccccccCcchhhhhhh
Confidence 999999999999999999999999988 56 888999999999999999999 9999999999988753 466666666
Q ss_pred ccCC
Q 028270 151 LKGK 154 (211)
Q Consensus 151 l~~~ 154 (211)
+...
T Consensus 172 ~~~~ 175 (187)
T KOG3138|consen 172 LIHG 175 (187)
T ss_pred eecC
Confidence 5443
No 36
>TIGR01890 N-Ac-Glu-synth amino-acid N-acetyltransferase. This model represents a clade of amino-acid N-acetyltransferases acting mainly on glutamate in the first step of the "acetylated" ornithine biosynthesis pathway. For this reason it is also called N-acetylglutamate synthase. The enzyme may also act on aspartate.
Probab=99.67 E-value=1.2e-15 Score=129.37 Aligned_cols=123 Identities=19% Similarity=0.202 Sum_probs=92.2
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCc
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTH 81 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 81 (211)
+.||+++.+|++.+.++.+......+........+......++++.. +++++|++.+.+..... .+++..++|+|+|
T Consensus 283 ~~IR~at~~Dl~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~V~~~-dg~iVG~~~~~~~~~~~--~~~I~~l~V~p~~ 359 (429)
T TIGR01890 283 ESIRQATIDDIGGIAALIRPLEEQGILVRRSREYLEREISEFSIIEH-DGNIIGCAALYPYAEED--CGEMACLAVSPEY 359 (429)
T ss_pred hheEECCHHHHHHHHHHHHHHHHcCCchhhhHHHHHhhcCcEEEEEE-CCEEEEEEEEEecCCCC--eEEEEEEEECHHH
Confidence 46999999999999998754333333222111222222344666665 89999999888764433 6789999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
||+|+|++||+++++++++ .|++.+++. ..| +.+||++ +||+.++.
T Consensus 360 Rg~GiG~~Ll~~l~~~A~~-~G~~~l~v~--~~~--a~~fY~k-~GF~~~g~ 405 (429)
T TIGR01890 360 QDGGRGERLLAHIEDRARQ-MGISRLFVL--TTR--TGHWFRE-RGFQTASV 405 (429)
T ss_pred cCCCHHHHHHHHHHHHHHH-cCCCEEEEe--ecc--hHHHHHH-CCCEECCh
Confidence 9999999999999999999 899987654 333 5799999 99999986
No 37
>PRK10562 putative acetyltransferase; Provisional
Probab=99.66 E-value=7.4e-15 Score=106.61 Aligned_cols=132 Identities=22% Similarity=0.286 Sum_probs=94.9
Q ss_pred EEeCChhhHHHHHHhhhhcC--CccchhHH-------HHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEE
Q 028270 4 IRKATVDDLLAMQACNLFCL--PENYQMKY-------YFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITS 74 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~~--~~~~~~~~-------~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~ 74 (211)
||+++.+|++.+.++..... ..++.... ............+++.. ++++||++.+... ..+..
T Consensus 2 ir~~~~~D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~~iG~~~~~~~-------~~i~~ 73 (145)
T PRK10562 2 IREYQPSDLPAILQLWLESTIWAHPFIKEQYWRESAPLVRDVYLPAAQTWVWEE-DGKLLGFVSVLEG-------RFVGA 73 (145)
T ss_pred cccccchhhHHHHHHHHHhccccCCCCCHHHHHHhHHHhhhhhcCcccEEEEEE-CCEEEEEEEEeec-------cEEEE
Confidence 89999999999999865532 22221111 11111122234555555 7899999987532 35778
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC-Ccceeeeeeccc
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD-GEDAYDMRKQLK 152 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~-~~d~~~m~k~l~ 152 (211)
++|+|+|||+|+|+.||+.+++. ++.+.+.+...|.++++||+| +||+.++. .++.+ +.++++|.-..+
T Consensus 74 ~~v~~~~rg~G~g~~ll~~~~~~------~~~~~~~v~~~N~~s~~~y~k-~Gf~~~~~--~~~~~~~~~~~~~~~~~~ 143 (145)
T PRK10562 74 LFVAPKAVRRGIGKALMQHVQQR------YPHLSLEVYQKNQRAVNFYHA-QGFRIVDS--AWQEETQHPTWIMSWQAD 143 (145)
T ss_pred EEECHHHcCCCHHHHHHHHHHhh------CCeEEEEEEcCChHHHHHHHH-CCCEEccc--cccCCCCCEEEEEEecCC
Confidence 99999999999999999887663 346888899999999999999 99999984 35555 468888876543
No 38
>PLN02825 amino-acid N-acetyltransferase
Probab=99.66 E-value=1.9e-15 Score=128.98 Aligned_cols=136 Identities=18% Similarity=0.153 Sum_probs=101.7
Q ss_pred EEEeCChhhHHHHHHhhhhcCCcc----chhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEc
Q 028270 3 CIRKATVDDLLAMQACNLFCLPEN----YQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVL 78 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~~~~~----~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~ 78 (211)
.||+++.+|++.+.+|........ ++...+. .....++++.. +|++|||+.+.+..... .++|..++|+
T Consensus 369 ~IR~At~eDi~~I~~Li~~lee~g~lv~rs~e~le----~ei~~f~V~e~-Dg~IVG~aal~~~~~~~--~aEI~~laV~ 441 (515)
T PLN02825 369 GTRMARVEDLAGIRQIIRPLEESGILVRRTDEELL----RALDSFVVVER-EGSIIACAALFPFFEEK--CGEVAAIAVS 441 (515)
T ss_pred hheeCCHHHHHHHHHHHHHHHHcCCCcCCCHHHHH----hcCCcEEEEEE-CCEEEEEEEEEeecCCC--cEEEEEEEEC
Confidence 389999999999999987643322 2333322 22345677766 99999999887654433 6789999999
Q ss_pred CCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec------cccCCcceeeeeecc
Q 028270 79 RTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK------YYADGEDAYDMRKQL 151 (211)
Q Consensus 79 p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~------~~~~~~d~~~m~k~l 151 (211)
|+|||+|+|++||+++++++++ .|++++.+.+. .+.+||++ +||+..+...- .|......-++.|.|
T Consensus 442 P~yRGkGiG~~LL~~le~~Ar~-~G~~~L~Lltt----~a~~fY~k-~GF~~~~~~~lp~~~~~~yn~~r~sk~~~k~l 514 (515)
T PLN02825 442 PECRGQGQGDKLLDYIEKKAAS-LGLEKLFLLTT----RTADWFVR-RGFSECSIESLPEARRKRINLSRGSKYYMKKL 514 (515)
T ss_pred HHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEeC----cHHHHHHH-CCCEEeChhhCCHHHHhhcCccCCcEEEEEec
Confidence 9999999999999999999999 89999998763 46899999 99998875322 233334555666554
No 39
>PRK09831 putative acyltransferase; Provisional
Probab=99.64 E-value=2e-15 Score=109.95 Aligned_cols=129 Identities=17% Similarity=0.171 Sum_probs=91.5
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCc----cchhH-----------HHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPE----NYQMK-----------YYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN 66 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~----~~~~~-----------~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~ 66 (211)
|.||+++++|++.+.++....+.. .++.. .+... .. ...++++.. +|++||++.+..
T Consensus 1 ~~ir~a~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~~~~~v~~~-~~~iiG~~~~~~----- 72 (147)
T PRK09831 1 IQIRNYQPGDFQQLCAIFIRAVTMTASQHYSPQQIAAWAQIDESRWKEK-LA-KSQVRVAVI-NAQPVGFITCIE----- 72 (147)
T ss_pred CccccCChhhHHHHHHHHHHHHHHhhhhcCCHHHHHhccCCCHHHHHHH-Hh-cCceEEEEE-CCEEEEEEEehh-----
Confidence 468999999999999987664321 12211 11111 12 344666665 899999988742
Q ss_pred ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCC-ccee
Q 028270 67 ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADG-EDAY 145 (211)
Q Consensus 67 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~-~d~~ 145 (211)
.++..++|+|+|||+|+|++||.++++.+.. +. +.. |..+++||+| +||+.++..+.-..+. .+.+
T Consensus 73 ---~~i~~~~v~p~~~g~GiG~~Ll~~~~~~~~~------l~--v~~-~~~a~~~Y~k-~Gf~~~g~~~~~~~g~~~~~~ 139 (147)
T PRK09831 73 ---HYIDMLFVDPEYTRRGVASALLKPLIKSESE------LT--VDA-SITAKPFFER-YGFQTVKQQRVECRGEWFINF 139 (147)
T ss_pred ---ceeeeEEECHHHcCCCHHHHHHHHHHHHhhh------eE--eec-chhhHHHHHH-CCCEEeeccceEECCEEEEee
Confidence 3677899999999999999999999998754 33 333 4678999999 9999999866322222 4678
Q ss_pred eeeecc
Q 028270 146 DMRKQL 151 (211)
Q Consensus 146 ~m~k~l 151 (211)
+|.|.+
T Consensus 140 ~m~~~~ 145 (147)
T PRK09831 140 YMRYKP 145 (147)
T ss_pred EEEecC
Confidence 887765
No 40
>PHA01807 hypothetical protein
Probab=99.63 E-value=1.1e-14 Score=106.29 Aligned_cols=121 Identities=12% Similarity=0.096 Sum_probs=88.2
Q ss_pred CChhhHHHHHHhhhhcC---Ccc--ch-h----HHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCc-eeEEEEEE
Q 028270 7 ATVDDLLAMQACNLFCL---PEN--YQ-M----KYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNE-CHGHITSL 75 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~---~~~--~~-~----~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~-~~~~i~~l 75 (211)
++.+|+..+..+....+ |+. |. . ..+.....+.....+++.+ +|++||++.+........ ....+..+
T Consensus 9 ~~~~d~~~~~~l~l~~l~e~p~~~~w~s~ee~~~~~~~~~~~~~~~~lva~~-dg~lvG~~~l~~~~~~~~~~i~~l~~l 87 (153)
T PHA01807 9 AKAGTPSELQGLCWLAIQELEEFTLFRSKEEALERILDSTESNDRTELLVFR-DGKLAGIAVLVFEDDPHVGPCLGVQWQ 87 (153)
T ss_pred hhhCCHHHHHHHHHHHHHhCccCCCCCChHHHHHHHHHHhhCCCceEEEEEE-CCEEEEEEEEEcCCCcceeeeccceeE
Confidence 56788888877765543 432 32 1 2222223333445567666 899999998876553321 11223447
Q ss_pred EEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 76 AVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 76 ~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+|+|+|||+|||++||+.+++++++ .|+..+.+.+...|.+|++||++ |++.+
T Consensus 88 YV~pe~RG~GiG~~Ll~~~~~~Ar~-~G~~~l~l~v~~~n~~a~~~y~~---~~~~~ 140 (153)
T PHA01807 88 YVLPEYRNAGVAREFLRELIRLAGE-GNLPLIAFSHREGEGRYTIHYRR---VKPYG 140 (153)
T ss_pred EECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEecCCcHHHHHHHHh---cCccC
Confidence 9999999999999999999999999 89999999999999999999999 77666
No 41
>PF13673 Acetyltransf_10: Acetyltransferase (GNAT) domain; PDB: 2FIW_A 1BOB_A 3FNC_B 3EXN_A.
Probab=99.62 E-value=2.3e-14 Score=99.87 Aligned_cols=104 Identities=27% Similarity=0.434 Sum_probs=75.4
Q ss_pred hHHHHHHhhhhcCCc---cch---------hHHHHHHHhcCC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE
Q 028270 11 DLLAMQACNLFCLPE---NYQ---------MKYYFYHILSWP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV 77 (211)
Q Consensus 11 D~~~l~~l~~~~~~~---~~~---------~~~~~~~~~~~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V 77 (211)
|++++.+|....+.. ... ....+...+..+ ..++++.. ++++||++.+. . ...|..++|
T Consensus 1 D~~~i~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~-~~~ivG~~~~~---~----~~~i~~l~v 72 (117)
T PF13673_consen 1 DIPAIAELYREAWQENYWDYGPEQIDAWRYSPEDLEEYLEEGSHTIFVAEE-GGEIVGFAWLE---P----DGEISHLYV 72 (117)
T ss_dssp GHHHHHHHHHHHHHHHTTTTSHHHHHHHHSSHHHHHHHHCTCCCEEEEEEE-TTEEEEEEEEE---T----CEEEEEEEE
T ss_pred CHHHHHHHHHHHHHHhccCCCHHHHHHHhcCHHHHHHHHHhcCCEEEEEEE-CCEEEEEEEEc---C----CCeEEEEEE
Confidence 677888876665421 111 122234445454 56777777 99999999986 1 345899999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCc
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGY 128 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF 128 (211)
+|+|||+|+|++|++.++++++. |...+.+. .|..+.+||++ +||
T Consensus 73 ~p~~r~~Gig~~Ll~~~~~~~~~--~~~~l~~~---~~~~a~~~y~~-~GF 117 (117)
T PF13673_consen 73 LPEYRGRGIGRALLDAAEKEAKD--GIRRLTVE---ANERARRFYRK-LGF 117 (117)
T ss_dssp -GGGTTSSHHHHHHHHHHHHHTT--TCEEEEEE---C-HHHHHHHHH-TT-
T ss_pred ChhhcCCcHHHHHHHHHHHHHHc--CCcEEEEE---eCHHHHHHHHh-CCC
Confidence 99999999999999999999843 77766666 78899999999 998
No 42
>COG1246 ArgA N-acetylglutamate synthase and related acetyltransferases [Amino acid transport and metabolism]
Probab=99.62 E-value=5.8e-15 Score=105.39 Aligned_cols=123 Identities=18% Similarity=0.195 Sum_probs=95.7
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCc
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTH 81 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 81 (211)
+.||.++..|++.|.++........--.......+...-.-|+++.. +|++||++.+.+..... .+.+-.++|+|+|
T Consensus 1 ~~iR~A~~~Di~~I~~Li~~~~~~gil~~rs~~~le~~i~dF~i~E~-~g~viGC~aL~~~~~~~--~gE~~~laV~pd~ 77 (153)
T COG1246 1 EQIRKARISDIPAILELIRPLELQGILLRRSREQLEEEIDDFTIIER-DGKVIGCAALHPVLEED--LGELRSLAVHPDY 77 (153)
T ss_pred CceeeccccchHHHHHHHHHHhhccccchhhHHHHHHHHhhheeeee-CCcEEEEEeecccCccC--eeeEEEEEECHHh
Confidence 36899999999999999877554322111111122222345777777 99999999999633332 8999999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
||+|+|..|++.++..+++ .|++++++.+. .+..|+++ +||+.+..
T Consensus 78 r~~G~G~~Ll~~~~~~Ar~-~gi~~lf~LTt----~~~~~F~~-~GF~~vd~ 123 (153)
T COG1246 78 RGSGRGERLLERLLADARE-LGIKELFVLTT----RSPEFFAE-RGFTRVDK 123 (153)
T ss_pred cCCCcHHHHHHHHHHHHHH-cCCceeeeeec----ccHHHHHH-cCCeECcc
Confidence 9999999999999999999 89999998764 35789999 99998875
No 43
>PRK12308 bifunctional argininosuccinate lyase/N-acetylglutamate synthase; Provisional
Probab=99.61 E-value=8.4e-15 Score=129.11 Aligned_cols=122 Identities=16% Similarity=0.167 Sum_probs=92.0
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCc
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTH 81 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 81 (211)
+.||+++++|++.+.++....+...+........+......++++.. +|++||++.+...... ..+|..++|+|+|
T Consensus 464 m~IR~a~~~D~~~I~~L~~~~~~~~~~~~~~~~~l~~~~~~~~Va~~-~g~IVG~~~l~~~~~~---~~~I~~i~V~P~~ 539 (614)
T PRK12308 464 VKVRPARLTDIDAIEGMVAYWAGLGENLPRSRNELVRDIGSFAVAEH-HGEVTGCASLYIYDSG---LAEIRSLGVEAGW 539 (614)
T ss_pred CEEEECCHHHHHHHHHHHHHHHhhhcccccCHHHHhcccCcEEEEEE-CCEEEEEEEEEEcCCC---eEEEEEEEECHHH
Confidence 67999999999999998765432111111011122233355677766 8999999988764332 5789999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
||+|||++||+.+++++++ .|++.+++.+. +..||+| +||+..++.
T Consensus 540 rGkGIGk~Ll~~l~~~ak~-~g~~~i~l~~~-----a~~FYek-~GF~~~~~~ 585 (614)
T PRK12308 540 QVQGQGSALVQYLVEKARQ-MAIKKVFVLTR-----VPEFFMK-QGFSPTSKS 585 (614)
T ss_pred cCCCHHHHHHHHHHHHHHH-CCCCEEEEeeC-----cHHHHHH-CCCEECCcc
Confidence 9999999999999999999 89999887642 3689999 999988844
No 44
>COG3153 Predicted acetyltransferase [General function prediction only]
Probab=99.61 E-value=7.3e-14 Score=102.64 Aligned_cols=145 Identities=21% Similarity=0.183 Sum_probs=113.6
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhc----CCCeEEEEEecCCcEEEEEEEEEecCC--CceeEEEEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILS----WPQLLYVAEDYNGRIVGYVLAKMEEES--NECHGHITS 74 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~----~~~~~~v~~~~~g~ivG~~~~~~~~~~--~~~~~~i~~ 74 (211)
||.||..++.|.+.+.++....|. +.........+.. .....+|+.+ +|++||.+.+....-. .....-+.-
T Consensus 3 ~~~ir~e~~~d~~~i~~~~~~aF~-~~~e~~~v~~lR~~~~~~~~LslVA~d-~g~vvG~Il~s~v~~~g~~~~~~~LaP 80 (171)
T COG3153 3 MMLIRTETPADIPAIEALTREAFG-PGREAKLVDKLREGGRPDLTLSLVAED-DGEVVGHILFSPVTVGGEELGWLGLAP 80 (171)
T ss_pred ccEEEecChhhHHHHHHHHHHHhh-cchHHHHHHHHHhcCCcccceeEEEee-CCEEEEEEEEeEEEecCcccceEEEEe
Confidence 589999999999999999999997 4444444444443 3356788888 6999999988776554 223566779
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCC-cceeeeeecccC
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADG-EDAYDMRKQLKG 153 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~-~d~~~m~k~l~~ 153 (211)
++|+|+|||+|||++|+...++.++. .|...+.+.-++ .+|.+ +||+......-+..-+ .+...|.+.|..
T Consensus 81 LaV~p~~qg~GIG~~Lvr~~le~a~~-~G~~~v~vlGdp------~YY~r-fGF~~~~~~~l~~p~~~~~~~fl~~~L~~ 152 (171)
T COG3153 81 LAVDPEYQGQGIGSALVREGLEALRL-AGASAVVVLGDP------TYYSR-FGFEPAAGAKLYAPGPVPDERFLALELGD 152 (171)
T ss_pred EEEchhhcCCcHHHHHHHHHHHHHHH-CCCCEEEEecCc------ccccc-cCcEEccccccccCCCCCCceEEEEEccC
Confidence 99999999999999999999999999 899988776443 58999 9999998665543322 567888888877
Q ss_pred CC
Q 028270 154 KQ 155 (211)
Q Consensus 154 ~~ 155 (211)
..
T Consensus 153 ~~ 154 (171)
T COG3153 153 GA 154 (171)
T ss_pred Cc
Confidence 54
No 45
>PF13302 Acetyltransf_3: Acetyltransferase (GNAT) domain; PDB: 3TTH_C 3JUW_A 2ZXV_A 2Z0Z_A 2VI7_B 3EG7_F 1YRE_C 3IGR_B 3FBU_A 2FCK_A ....
Probab=99.61 E-value=4e-14 Score=101.90 Aligned_cols=125 Identities=18% Similarity=0.218 Sum_probs=88.4
Q ss_pred eEEEeCChhhHHHHHHhhhhc----C---Ccc-chh---HHHHHH-HhcC--C-CeEEEEEec-CCcEEEEEEEEEecCC
Q 028270 2 VCIRKATVDDLLAMQACNLFC----L---PEN-YQM---KYYFYH-ILSW--P-QLLYVAEDY-NGRIVGYVLAKMEEES 65 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~----~---~~~-~~~---~~~~~~-~~~~--~-~~~~v~~~~-~g~ivG~~~~~~~~~~ 65 (211)
+.||+++++|++.+.++.... + ..+ .+. ..++.. .... . ..+|++.+. ++++||++.+......
T Consensus 2 l~lr~~~~~D~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~iG~i~~~~~~~~ 81 (142)
T PF13302_consen 2 LTLRPLTPEDADAIYEWRSDPEIRRYLPWGPPWPTLEEAEEWIQSRQDSWENHGYYYFAIEDKDDGEIIGFIGLYNIDKN 81 (142)
T ss_dssp EEEEE-HGGGHHHHHHHHTTTTHCTTSSTTTSSSSHHHHHHHHHHHHHCHHEETEEEEEEEETTTTEEEEEEEEEEEETT
T ss_pred EEEEcCCHHHHHHHHHHhcCHHHHHhcCCCCCCCCHHHHHHHHHHhhhhhhcccceEEEEEeccCCceEEEeeeeecccC
Confidence 689999999999999987421 1 112 122 223331 1111 1 234555542 3579999999544322
Q ss_pred CceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCce
Q 028270 66 NECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYK 129 (211)
Q Consensus 66 ~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~ 129 (211)
.. .+.+ .+.|.|+|||+|+|+.++..+++++++..|+.++.+.+.+.|.+|+++++| +||+
T Consensus 82 ~~-~~ei-g~~i~~~~~g~G~~~~~~~~~~~~~~~~~~~~~i~a~~~~~N~~s~~~~~k-~GF~ 142 (142)
T PF13302_consen 82 NN-WAEI-GYWIGPDYRGKGYGTEALKLLLDWAFEELGLHRIIATVMADNEASRRLLEK-LGFE 142 (142)
T ss_dssp TT-EEEE-EEEEEGGGTTSSHHHHHHHHHHHHHHHTSTSSEEEEEEETT-HHHHHHHHH-TT-E
T ss_pred CC-cccc-ccchhHHHHhhhHHHHHHHHHHHHHHhcCCcEEEEEEECcCCHHHHHHHHH-cCCC
Confidence 21 5565 588999999999999999999999976699999999999999999999999 9996
No 46
>PF13508 Acetyltransf_7: Acetyltransferase (GNAT) domain; PDB: 3EY5_A 3FRM_B 3D8P_B 3GY9_A 3GYA_A 3S6F_A 2Q7B_A 1CM0_B 1XEB_B 1Y7R_A ....
Probab=99.59 E-value=5.2e-14 Score=91.57 Aligned_cols=77 Identities=32% Similarity=0.479 Sum_probs=63.3
Q ss_pred CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHH
Q 028270 41 QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFN 120 (211)
Q Consensus 41 ~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~ 120 (211)
..++++.+ ++++||++.+..... ..+|..++|+|+|||+|||++||+.+.+.+ +...+++.+ ++.+..
T Consensus 3 ~~~~~~~~-~~~ivG~~~~~~~~~----~~~i~~~~v~~~~rg~Gig~~ll~~~~~~~----~~~~i~l~~---~~~~~~ 70 (79)
T PF13508_consen 3 ERFFVAED-DGEIVGFIRLWPNED----FAYIGYLAVDPEYRGKGIGSKLLNYLLEKA----KSKKIFLFT---NPAAIK 70 (79)
T ss_dssp EEEEEEEE-TTEEEEEEEEEETTT----EEEEEEEEE-GGGTTSSHHHHHHHHHHHHH----TCSEEEEEE---EHHHHH
T ss_pred cEEEEEEE-CCEEEEEEEEEEcCC----EEEEEEEEECHHHcCCCHHHHHHHHHHHHc----CCCcEEEEE---cHHHHH
Confidence 34566666 999999999966665 789999999999999999999999998877 334577766 458899
Q ss_pred HHhhhcCceE
Q 028270 121 LYTETLGYKI 130 (211)
Q Consensus 121 ~Y~k~~GF~~ 130 (211)
||++ +||++
T Consensus 71 fY~~-~GF~~ 79 (79)
T PF13508_consen 71 FYEK-LGFEE 79 (79)
T ss_dssp HHHH-TTEEE
T ss_pred HHHH-CcCCC
Confidence 9999 99985
No 47
>TIGR03448 mycothiol_MshD mycothiol biosynthesis acetyltransferase. Members of this family are MshD, the acetyltransferase that catalyzes the final step of mycothiol biosynthesis in various members of the Actinomyctes, Mycothiol replaces glutathione in these species.
Probab=99.57 E-value=9.2e-14 Score=112.16 Aligned_cols=121 Identities=17% Similarity=0.088 Sum_probs=90.8
Q ss_pred EeCChhhHHHHHHhhhhcCC----ccchhHHHHHHHhc---CCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE
Q 028270 5 RKATVDDLLAMQACNLFCLP----ENYQMKYYFYHILS---WPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV 77 (211)
Q Consensus 5 r~~~~~D~~~l~~l~~~~~~----~~~~~~~~~~~~~~---~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V 77 (211)
.+++++|++++.+|...++. .+++.. +...+.. .+...+++.+ ++++||++.+...... ..++..++|
T Consensus 4 ~~l~~~d~~~v~~L~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-~~~~vG~~~~~~~~~~---~~~~~~l~V 78 (292)
T TIGR03448 4 AALDADLRRDVRELLAAATAVDGVAPVSEQ-VLRGLREPGAGHTRHLVAVD-SDPIVGYANLVPARGT---DPAMAELVV 78 (292)
T ss_pred ccCCHHHHHHHHHHHHHHHhcCCCCCCCHH-HHhhccccCCCCceEEEEEE-CCEEEEEEEEEcCCCC---cceEEEEEE
Confidence 46889999999998876542 245543 3333321 2344666665 8899999988775432 357889999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
+|+|||+|||++||+++++.+. ..+.+.+...|..+++||++ +||+.......
T Consensus 79 ~p~~rg~GiG~~Ll~~~~~~~~-----~~~~~~~~~~n~~a~~fy~~-~Gf~~~~~~~~ 131 (292)
T TIGR03448 79 HPAHRRRGIGRALIRALLAKGG-----GRLRVWAHGDLPAARALASR-LGLVPTRELLQ 131 (292)
T ss_pred CHhhcCCCHHHHHHHHHHHhcc-----CceEEEEcCCCHHHHHHHHH-CCCEEccEEEE
Confidence 9999999999999999998753 34777888899999999999 99998875433
No 48
>PRK01346 hypothetical protein; Provisional
Probab=99.56 E-value=8.6e-14 Score=117.60 Aligned_cols=128 Identities=22% Similarity=0.170 Sum_probs=97.1
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHH-hcCCCeEEEEEecCCcEEEEEEEEEec-----CCCceeEEEEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHI-LSWPQLLYVAEDYNGRIVGYVLAKMEE-----ESNECHGHITSL 75 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-~~~~~~~~v~~~~~g~ivG~~~~~~~~-----~~~~~~~~i~~l 75 (211)
+.||+++.+|++.+.++...+|+...+........ ...+...+++.+ ++++||++.+.... ....+..+|..+
T Consensus 7 ~~iR~~~~~D~~~i~~L~~~~f~~~~~~~~~~~~~~~~~~~~~~va~~-~~~lvg~~~~~~~~~~~~~~~~~~~~~i~~v 85 (411)
T PRK01346 7 ITIRTATEEDWPAWFRAAATGFGDSPSDEELEAWRALVEPDRTLGAFD-GDEVVGTAGAFDLRLTVPGGAVLPAAGVTAV 85 (411)
T ss_pred ceeecCCHHHHHHHHHHHHHHcCCCCChHHHHHHHHhcCcCCeEEEEE-CCEEEEEEEEeccccccCCCCccceeEEEEE
Confidence 78999999999999999999997644322211111 123345677775 89999999876543 111136899999
Q ss_pred EEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecc
Q 028270 76 AVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKY 137 (211)
Q Consensus 76 ~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~ 137 (211)
+|+|+|||+|+|++||.++++.+++ .|...+.|.+.. ..||+| +||........+
T Consensus 86 ~V~P~~RgrGig~~Ll~~~l~~a~~-~g~~~~~L~~~~-----~~~Y~r-~Gf~~~~~~~~~ 140 (411)
T PRK01346 86 TVAPTHRRRGLLTALMREQLRRIRE-RGEPVAALTASE-----GGIYGR-FGYGPATYSQSL 140 (411)
T ss_pred EEChhhcCCCHHHHHHHHHHHHHHH-CCCcEEEEECCc-----hhhHhh-CCCeeccceEEE
Confidence 9999999999999999999999998 798877777543 369999 999988765544
No 49
>KOG2488 consensus Acetyltransferase (GNAT) domain-containing protein [General function prediction only]
Probab=99.55 E-value=1.1e-13 Score=101.28 Aligned_cols=108 Identities=14% Similarity=0.181 Sum_probs=89.6
Q ss_pred chhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcE
Q 028270 27 YQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEY 106 (211)
Q Consensus 27 ~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~ 106 (211)
|....-...+......++++....+++|||.+++..-+.+.++.++..+-|.++|||+|||+.||+.+...+.. .+.++
T Consensus 78 w~~~~K~~El~~~~~~Yi~a~~~~~~~vgf~~Frf~vd~g~~vlYcyEvqv~~~yR~kGiGk~LL~~l~~~a~~-~~~~k 156 (202)
T KOG2488|consen 78 WDDNSKAKELRNRKLRYICAWNNKSKLVGFTMFRFTVDTGDPVLYCYEVQVASAYRGKGIGKFLLDTLEKLADS-RHMRK 156 (202)
T ss_pred cCchhHHHHHhhccceEEEEEcCCCceeeEEEEEEEcccCCeEEEEEEEeehhhhhccChHHHHHHHHHHHHHH-HHhhh
Confidence 44333334444444555666653348999999999998888899999999999999999999999999999988 79999
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
|.|.|...|.+|+.||++ +||.+....++
T Consensus 157 VmLTVf~~N~~al~Fy~~-~gf~~~~~sp~ 185 (202)
T KOG2488|consen 157 VMLTVFSENIRALGFYHR-LGFVVDEESPC 185 (202)
T ss_pred heeeeecccchhHHHHHH-cCcccCCCCCc
Confidence 999999999999999999 99998875554
No 50
>KOG3396 consensus Glucosamine-phosphate N-acetyltransferase [Cell wall/membrane/envelope biogenesis]
Probab=99.50 E-value=3.8e-13 Score=93.18 Aligned_cols=126 Identities=17% Similarity=0.150 Sum_probs=92.1
Q ss_pred eEEEeCChhhHHH-HHHhhhhc-CCccchhHHHH---HHHhcCCC--eEEEEEe-cCCcEEEEEEEEEecCCC---ceeE
Q 028270 2 VCIRKATVDDLLA-MQACNLFC-LPENYQMKYYF---YHILSWPQ--LLYVAED-YNGRIVGYVLAKMEEESN---ECHG 70 (211)
Q Consensus 2 i~ir~~~~~D~~~-l~~l~~~~-~~~~~~~~~~~---~~~~~~~~--~~~v~~~-~~g~ivG~~~~~~~~~~~---~~~~ 70 (211)
+.|||+..+|... ..++..+. -...-+..+|. ..+..... .+.|+.+ ..++|||.+.+.....-- ...+
T Consensus 7 ~~lR~L~~~D~~kGf~elL~qLT~vG~vt~e~F~krf~~mk~~~~~Y~i~Vied~~s~~vigtatL~IE~KfIh~~g~rG 86 (150)
T KOG3396|consen 7 FKLRPLEEDDYGKGFIELLKQLTSVGVVTREQFEKRFEAMKKSGDWYYIVVIEDKESEKVIGTATLFIERKFIHGCGSRG 86 (150)
T ss_pred eEEeecccccccchHHHHHHHHhhccccCHHHHHHHHHHHHhcCCcEEEEEEEeCCcCeEEEEEEEEEehhhhhcccccC
Confidence 6799999999985 54443332 22223333333 33333333 3334443 347999999887763321 1378
Q ss_pred EEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 71 HITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 71 ~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+|..++|+++|||+++|+.|+..++..++. +|+-++.|.+.+.| +.||+| +||...+
T Consensus 87 hiEDVVV~~~~rgk~LGkllv~~Lv~l~k~-lgcYKi~LdC~~~n---v~FYeK-cG~s~~~ 143 (150)
T KOG3396|consen 87 HIEDVVVDSEYRGKQLGKLLVETLVDLAKS-LGCYKIILDCDPKN---VKFYEK-CGYSNAG 143 (150)
T ss_pred ceeEEEeChhhhhhHHhHHHHHHHHHHHHh-cCcEEEEEecchhh---hhHHHH-cCccccc
Confidence 899999999999999999999999999999 99999999999988 679999 9998766
No 51
>PRK13688 hypothetical protein; Provisional
Probab=99.43 E-value=3.1e-12 Score=93.79 Aligned_cols=108 Identities=14% Similarity=0.143 Sum_probs=73.5
Q ss_pred EEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecC-------CCceeEEEEEEE
Q 028270 4 IRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEE-------SNECHGHITSLA 76 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~-------~~~~~~~i~~l~ 76 (211)
||++...|++.+.++...+|. .+ ....++++.+ ++++||++.+..... ......+|..++
T Consensus 20 ~~~~~~~dl~~l~~l~~~~f~-~~-----------~~~~~~~~~~-~~~~VG~~~l~~~dg~~~~~~~~~~~~~~L~~l~ 86 (156)
T PRK13688 20 FREFGNQELSMLEELQANIIE-ND-----------SESPFYGIYY-GDSLVARMSLYKKGGVEEPYFEDTQDYLELWKLE 86 (156)
T ss_pred HHHhcHHHHHHHHhhhhhEee-cC-----------CCCCEEEEEE-CCEEEEEEEEEecCCcccccccCCCCeEEEEEEE
Confidence 355666666666666665552 11 2234566666 889999987754321 111257899999
Q ss_pred EcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 77 VLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
|+|+|||+|||++||+.+ .+ .++. +. +...| .+..||+| +||+..+..
T Consensus 87 V~p~~rgkGiG~~Ll~~a----~~-~~~~-~~--~~~~~-~a~~FY~k-~GF~~~~~~ 134 (156)
T PRK13688 87 VLPKYQNRGYGEMLVDFA----KS-FQLP-IK--TIARN-KSKDFWLK-LGFTPVEYK 134 (156)
T ss_pred ECHHHcCCCHHHHHHHHH----HH-hCCe-EE--EEecc-chHHHHHh-CCCEEeEEe
Confidence 999999999999999854 33 3543 33 34455 47899999 999998855
No 52
>PF08445 FR47: FR47-like protein; InterPro: IPR013653 Proteins in this entry have a conserved region similar to the C-terminal region of the Drosophila melanogaster (Fruit fly) hypothetical protein FR47 (Q9VR51 from SWISSPROT). This protein has been found to consist of two N-acyltransferase-like domains swapped with the C-terminal strands. ; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups; PDB: 1SQH_A 3EC4_B.
Probab=99.42 E-value=5.1e-12 Score=83.44 Aligned_cols=76 Identities=28% Similarity=0.458 Sum_probs=60.7
Q ss_pred CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCce
Q 028270 50 NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYK 129 (211)
Q Consensus 50 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~ 129 (211)
+++.+..+.+....+ .+.|..+.|+|+|||+|+|+.++..+.+.+.+ .|.. ..+.+..+|.+|+++|+| +||+
T Consensus 6 ~~~~~~l~~~~~~~~----~g~i~~v~t~p~~RrrGlg~~lv~~l~~~~~~-~g~~-~~l~v~~~N~~s~~ly~k-lGf~ 78 (86)
T PF08445_consen 6 DGELVALVAWIIRSD----DGEIGGVYTLPEHRRRGLGSALVAALARELLE-RGKT-PFLYVDADNEASIRLYEK-LGFR 78 (86)
T ss_dssp CTCCEEEEEEEEESC----TCCEEEEEE-GGGTTSSHHHHHHHHHHHHHHH-TTSE-EEEEEETT-HHHHHHHHH-CT-E
T ss_pred ECCccceeeEeeeCC----CcEEEEEEECHHHcCCCHHHHHHHHHHHHHHh-CCCc-EEEEEECCCHHHHHHHHH-cCCE
Confidence 334455555555554 46899999999999999999999999999988 6765 788999999999999999 9999
Q ss_pred Eec
Q 028270 130 IHD 132 (211)
Q Consensus 130 ~~~ 132 (211)
...
T Consensus 79 ~~~ 81 (86)
T PF08445_consen 79 EIE 81 (86)
T ss_dssp EEE
T ss_pred EEE
Confidence 885
No 53
>COG2153 ElaA Predicted acyltransferase [General function prediction only]
Probab=99.38 E-value=2.4e-12 Score=90.39 Aligned_cols=139 Identities=18% Similarity=0.192 Sum_probs=99.7
Q ss_pred eCChhhHHHHHHhhhhcCC----ccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCc
Q 028270 6 KATVDDLLAMQACNLFCLP----ENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTH 81 (211)
Q Consensus 6 ~~~~~D~~~l~~l~~~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 81 (211)
.++...+-++..|....|- -||+.-.- ..... ....+.....+|++++++.+.+...... ...|+.++|.|++
T Consensus 12 ~Lt~~ely~LlkLRv~VFVVEQ~CPY~E~Dg-~Dl~~-~~~Hl~~~~~~g~LvAyaRLl~~~~~~~-~~~iGRV~v~~~~ 88 (155)
T COG2153 12 DLTVRELYELLKLRVDVFVVEQNCPYPELDG-KDLLG-DTRHLLGWTPDGELVAYARLLPPGAEYE-EVSIGRVIVSPAA 88 (155)
T ss_pred hcCHHHHHHHHHhheeEEEEecCCCCcCcCC-ccccc-ccceEEEEcCCCeEEEEEecCCCCCCcC-ceeeeeEEECHhh
Confidence 3455555566666666662 23322110 01111 2334444444899999999999877665 4679999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecccC
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKG 153 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l~~ 153 (211)
||+|+|.+||..+++.+.+...-+.+++.... -.+.||.+ +||+..+ ..|..+|...+-|.+...+
T Consensus 89 RG~glG~~Lm~~AL~~~~~~~p~~~v~l~AQa---hLq~fYa~-~GFv~~~--e~yledGIpHv~M~r~~~~ 154 (155)
T COG2153 89 RGQGLGQQLMEKALETAGREWPDKPVYLGAQA---HLQDFYAS-FGFVRVG--EEYLEDGIPHVGMIREVIQ 154 (155)
T ss_pred hccchhHHHHHHHHHHHHhhCCCCCeEEehHH---HHHHHHHH-hCcEEcC--chhhcCCCCchhhhhcccC
Confidence 99999999999999999885445567777655 66889999 9999888 6688888888888887654
No 54
>COG1670 RimL Acetyltransferases, including N-acetylases of ribosomal proteins [Translation, ribosomal structure and biogenesis]
Probab=99.32 E-value=7.8e-11 Score=88.10 Aligned_cols=100 Identities=16% Similarity=0.188 Sum_probs=79.7
Q ss_pred CcEEEEEEEEEecC-CCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCce
Q 028270 51 GRIVGYVLAKMEEE-SNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYK 129 (211)
Q Consensus 51 g~ivG~~~~~~~~~-~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~ 129 (211)
+++||.+.+..... ... ......+.+.|+|+|+|+|+.++..++++++...+++++.+.+.+.|.+++++++| +||+
T Consensus 77 ~~~iG~~~~~~~~~~~~~-~~~~ig~~l~~~~~g~G~~tea~~~~l~~~f~~~~l~ri~~~~~~~N~~S~rv~ek-~Gf~ 154 (187)
T COG1670 77 GELIGVIGLSDIDRAANG-DLAEIGYWLDPEYWGKGYATEALRALLDYAFEELGLHRIEATVDPENEASIRVYEK-LGFR 154 (187)
T ss_pred CeEEEEEEEEEecccccc-ceEEEEEEEChHHhcCchHHHHHHHHHHHhhhhcCceEEEEEecCCCHHHHHHHHH-cCCh
Confidence 48999999987653 111 33444667799999999999999999999999899999999999999999999999 9999
Q ss_pred Eeceeecc-ccCC--cceeeeeeccc
Q 028270 130 IHDVEAKY-YADG--EDAYDMRKQLK 152 (211)
Q Consensus 130 ~~~~~~~~-~~~~--~d~~~m~k~l~ 152 (211)
..+..+.. +.++ .|.+.+....+
T Consensus 155 ~eg~~~~~~~~~g~~~d~~~~~~~~~ 180 (187)
T COG1670 155 LEGELRQHEFIKGRWRDTVLYSLLRD 180 (187)
T ss_pred hhhhhhhceeeCCeeeeEEEEEEech
Confidence 99987764 2233 35555554443
No 55
>cd02169 Citrate_lyase_ligase Citrate lyase ligase. Citrate lyase ligase, also known as [Citrate (pro-3S)-lyase] ligase, is responsible for acetylation of the (2-(5''-phosphoribosyl)-3'-dephosphocoenzyme-A) prosthetic group of the gamma subunit of citrate lyase, converting the inactive thiol form of this enzyme to the active form. The acetylation of 1 molecule of deacetyl-citrate lyase to enzymatically active citrate lyase requires 6 molecules of ATP. The Adenylylyltranferase activity of the enzyme involves the formation of AMP and and pyrophosphate in the acetylation reaction.
Probab=99.32 E-value=1.6e-11 Score=98.73 Aligned_cols=76 Identities=18% Similarity=0.156 Sum_probs=64.9
Q ss_pred EEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHh
Q 028270 44 YVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYT 123 (211)
Q Consensus 44 ~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~ 123 (211)
+.+..+++++||++.+.. .+|..++|+|+|||+|+|++||+++++++++ .|+..+++.+...| ..||+
T Consensus 8 ~~v~~~~~~iVG~~~l~~--------~~I~~vaV~p~~Rg~GiG~~Ll~~l~~~a~~-~g~~~i~L~t~~~~---~~fYe 75 (297)
T cd02169 8 VGIFDDAGELIATGSIAG--------NVLKCVAVCPKYQGEGLALKIVSELINKAYE-EGIFHLFLFTKPKN---AKFFR 75 (297)
T ss_pred EEEEEECCEEEEEEEecc--------CEEEEEEECHHHcCCCHHHHHHHHHHHHHHH-CCCCEEEEEEcccH---HHHHH
Confidence 333334799999987742 2588999999999999999999999999999 89999999987644 68999
Q ss_pred hhcCceEec
Q 028270 124 ETLGYKIHD 132 (211)
Q Consensus 124 k~~GF~~~~ 132 (211)
| +||+..+
T Consensus 76 k-~GF~~~~ 83 (297)
T cd02169 76 G-LGFKELA 83 (297)
T ss_pred H-CCCEEec
Confidence 9 9999888
No 56
>COG3393 Predicted acetyltransferase [General function prediction only]
Probab=99.31 E-value=2.6e-11 Score=93.67 Aligned_cols=89 Identities=21% Similarity=0.262 Sum_probs=74.8
Q ss_pred CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHH
Q 028270 41 QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFN 120 (211)
Q Consensus 41 ~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~ 120 (211)
...++... +|+||..+......+. .+.|..++++|+|||||||+.|+..+...+.+ .|.. ..|.+...|+.|.+
T Consensus 177 ~~~~f~~~-d~~iVa~A~t~a~~~~---~~~I~gV~T~peyR~kGyAt~lva~L~~~lL~-eGk~-~~L~~~~~N~~A~~ 250 (268)
T COG3393 177 SRTYFLEG-DGKIVAKAETAAENPA---YAQINGVYTHPEYRGKGYATALVATLAAKLLA-EGKI-PCLFVNSDNPVARR 250 (268)
T ss_pred eeEEEEcc-CCcEEEeeeccccCCc---ceEEEEEEcCHHHccccHHHHHHHHHHHHHHh-CCCe-eEEEEecCCHHHHH
Confidence 34444444 6699999988776665 78999999999999999999999999999988 5654 67788899999999
Q ss_pred HHhhhcCceEeceeec
Q 028270 121 LYTETLGYKIHDVEAK 136 (211)
Q Consensus 121 ~Y~k~~GF~~~~~~~~ 136 (211)
+|+| .||+..+....
T Consensus 251 iY~r-iGF~~~g~~~~ 265 (268)
T COG3393 251 IYQR-IGFREIGEFRE 265 (268)
T ss_pred HHHH-hCCeecceEEE
Confidence 9999 99999986543
No 57
>COG3981 Predicted acetyltransferase [General function prediction only]
Probab=99.18 E-value=5.7e-10 Score=80.92 Aligned_cols=129 Identities=21% Similarity=0.286 Sum_probs=96.0
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCc-----------c---chhHHHHHHHhcC-----------CCeEEEEEecCCcEEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPE-----------N---YQMKYYFYHILSW-----------PQLLYVAEDYNGRIVGY 56 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~-----------~---~~~~~~~~~~~~~-----------~~~~~v~~~~~g~ivG~ 56 (211)
|.|+..+..|..++.++....... . .....++...... +...|++..+++++||+
T Consensus 4 ~~l~~p~L~~k~a~le~~~e~~~~~~~~~~~~~~~~~~~~~fed~L~~~~~~~~~~~~~~g~V~~~~y~~v~~d~~ivG~ 83 (174)
T COG3981 4 MKLRRPTLKDKDAFLEMKKEFLTDGSTEAGAAWKADYEQEDFEDWLEDLTRQEPGNNLPEGWVPASTYWAVDEDGQIVGF 83 (174)
T ss_pred ccccCCchhhHHHHHHHHHhhhhcCCcccCceeecccccccHHHHHHHHhccCCCcCCCCCceeceeEEEEecCCcEEEE
Confidence 667888888988888875442210 1 1223344443221 12346666658999999
Q ss_pred EEEEEecCCCc--eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 57 VLAKMEEESNE--CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 57 ~~~~~~~~~~~--~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+.++..-.... .-++| ...|.|..||||||+++|..+++.+++ .|++++.+.++++|.++.+.-++ +|=....+
T Consensus 84 i~lRh~Ln~~ll~~gGHI-GY~VrPseR~KGYA~emLkl~L~~ar~-lgi~~Vlvtcd~dN~ASrkvI~~-NGGile~~ 159 (174)
T COG3981 84 INLRHQLNDFLLEEGGHI-GYSVRPSERRKGYAKEMLKLALEKARE-LGIKKVLVTCDKDNIASRKVIEA-NGGILENE 159 (174)
T ss_pred EEeeeecchHHHhcCCcc-cceeChhhhccCHHHHHHHHHHHHHHH-cCCCeEEEEeCCCCchhhHHHHh-cCCEEeEE
Confidence 99988765432 13344 678999999999999999999999999 99999999999999999999999 99665553
No 58
>KOG4144 consensus Arylalkylamine N-acetyltransferase [General function prediction only]
Probab=99.14 E-value=2.7e-11 Score=85.81 Aligned_cols=129 Identities=18% Similarity=0.183 Sum_probs=93.1
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhH--HHHHHHhcCCCeEEEEEe--------cCCcEEEEEEEEEecCCCc---
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMK--YYFYHILSWPQLLYVAED--------YNGRIVGYVLAKMEEESNE--- 67 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~--~~~~~~~~~~~~~~v~~~--------~~g~ivG~~~~~~~~~~~~--- 67 (211)
|+.|||..++|..++..|....||++.-.. ..-.++.+-++.+....+ ..+.+||.++....+....
T Consensus 11 ~~~irp~i~e~~q~~~~Lea~~FPe~erasfeii~~r~i~~pevc~glf~~~~h~~~~~~~tLIghIigs~~~~E~lt~E 90 (190)
T KOG4144|consen 11 APRIRPGIPESCQRRHTLEASEFPEDERASFEIIRERFISVPEVCPGLFDEIRHFLTLCEGTLIGHIIGSLWDKERLTQE 90 (190)
T ss_pred cccCCCCChHHHHHHhccccccCChhHHHHHHHHHHHHhcchhhcchhhhhHHhhhhhccccceehhhcccCcchhhhHH
Confidence 578999999999999999999998765322 222344455544322211 2678999987765543321
Q ss_pred ---------eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 68 ---------CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 68 ---------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
....|..++|+|+||.+|+|..|+...++..-++.=.+++.|-+.. +.+.||++ +||+.++.
T Consensus 91 Sm~kh~s~g~ni~iHsl~Ihpa~rk~g~a~~Ll~~ylq~l~~q~i~~r~~Li~h~---pLvPFYEr-~gFk~vgp 161 (190)
T KOG4144|consen 91 SMTKHRSGGHNIHIHSLAIHPAFRKQGRAPILLWRYLQHLGSQPIVRRAALICHD---PLVPFYER-FGFKAVGP 161 (190)
T ss_pred HHhhhhcCCcceeEEEEEecHHHHhcCcchhHHHHHHHHhhcCccccceeeeecC---CccchhHh-cCceeecc
Confidence 2478999999999999999999999988876553335556665554 67889999 99999985
No 59
>TIGR00124 cit_ly_ligase [citrate (pro-3S)-lyase] ligase. ATP is cleaved to AMP and pyrophosphate during the reaction. The carboxyl end is homologous to a number of cytidyltransferases that also release pyrophosphate.
Probab=99.13 E-value=1e-09 Score=89.70 Aligned_cols=81 Identities=17% Similarity=0.217 Sum_probs=68.5
Q ss_pred CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHH
Q 028270 41 QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFN 120 (211)
Q Consensus 41 ~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~ 120 (211)
..++++.+ +++|||++.+.. ..|..++|+|+|||+|+|++||.++++.+++ .|...+.+.+.+.| .+
T Consensus 31 d~~vv~~~-~~~lVg~g~l~g--------~~ik~vaV~~~~rG~Glg~~L~~~L~~~a~~-~G~~~l~l~Tk~~~---~~ 97 (332)
T TIGR00124 31 EIFIAVYE-DEEIIGCGGIAG--------NVIKCVAIDESLRGEGLALQLMTELENLAYE-LGRFHLFIFTKPEY---AA 97 (332)
T ss_pred CEEEEEEE-CCEEEEEEEEec--------CEEEEEEEcHHHcCCCHHHHHHHHHHHHHHH-cCCCEEEEEECchH---HH
Confidence 45566665 899999998732 2478999999999999999999999999999 89999998887655 57
Q ss_pred HHhhhcCceEeceee
Q 028270 121 LYTETLGYKIHDVEA 135 (211)
Q Consensus 121 ~Y~k~~GF~~~~~~~ 135 (211)
||++ +||.+.+...
T Consensus 98 fy~k-lGF~~i~~~~ 111 (332)
T TIGR00124 98 LFEY-CGFKTLAEAK 111 (332)
T ss_pred HHHH-cCCEEeeeec
Confidence 9999 9999988654
No 60
>PF13718 GNAT_acetyltr_2: GNAT acetyltransferase 2; PDB: 2ZPA_B.
Probab=99.12 E-value=4e-09 Score=79.40 Aligned_cols=116 Identities=18% Similarity=0.309 Sum_probs=73.0
Q ss_pred HHHHhcCCCe-EEEEEecCC--cEEEEEEEEEecCCCc----------------------------------eeEEEEEE
Q 028270 33 FYHILSWPQL-LYVAEDYNG--RIVGYVLAKMEEESNE----------------------------------CHGHITSL 75 (211)
Q Consensus 33 ~~~~~~~~~~-~~v~~~~~g--~ivG~~~~~~~~~~~~----------------------------------~~~~i~~l 75 (211)
+..+...|.. +|++.. ++ +|+|++.+..+..-.. ....|..|
T Consensus 18 L~~LlDaP~h~l~~l~~-~~~p~il~~~~v~~EG~l~~~l~~~i~~g~rRp~G~LiP~~L~~~~~~~~f~~l~g~RIvRI 96 (196)
T PF13718_consen 18 LQLLLDAPNHRLFVLLQ-PGDPDILGVAQVALEGGLSKELIEAILSGGRRPKGHLIPQTLAQHFGDPEFAQLSGARIVRI 96 (196)
T ss_dssp HHHHHH-TTEEEEEEE--SS--SEEEEEEEEEEE---HHHHHHHHTTS---SS-HHHHHHHHHSS-TTGGGSEEEEEEEE
T ss_pred HHHHhcCCcceeehhcc-CCCceEEEEEEEEecCCCCHHHHHHHHhCCCCCCCCCHHHHHHHHhCCHHHHhhcceeEEEE
Confidence 3555566665 555555 77 9999999887755321 46779999
Q ss_pred EEcCCccccCHHHHHHHHHHHHHH-------------------------HhcCCcEEEEEEecCcHHHHHHHhhhcCceE
Q 028270 76 AVLRTHRKLGLATKLMNAAQSAME-------------------------QVFGAEYVSLHVRKSNRAAFNLYTETLGYKI 130 (211)
Q Consensus 76 ~V~p~~rg~Gig~~Ll~~~~~~~~-------------------------~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~ 130 (211)
+|+|++|++|||+++|+.+.+++. . .+++.+..... -+....+||.| .||.+
T Consensus 97 AvhP~~q~~G~Gs~lL~~l~~~~~~~~~~~~~~~~~~~~~ll~~~~~~~~-~~vDylGtSFG-~t~~Ll~FW~k-~gf~p 173 (196)
T PF13718_consen 97 AVHPDLQRMGYGSRLLQQLEQYAEGKIPSLSEQDKEKLPPLLSKLSDRRP-PGVDYLGTSFG-ATPELLKFWQK-NGFVP 173 (196)
T ss_dssp EE-CCC-SSSHHHHHHHHHHHT------------------------------S-SEEEEEEE---HHHHHHHHC-TT-EE
T ss_pred EEChhhhcCCHHHHHHHHHHHHHhhhcccccccccccccccccccccccc-cCCCEEEeccC-CCHHHHHHHHH-CCcEE
Confidence 999999999999999999999993 4 57775554333 34578999999 99999
Q ss_pred eceeecccc-CCcceeeeeeccc
Q 028270 131 HDVEAKYYA-DGEDAYDMRKQLK 152 (211)
Q Consensus 131 ~~~~~~~~~-~~~d~~~m~k~l~ 152 (211)
+........ .|+...+|.|.++
T Consensus 174 v~l~~~~n~~SGe~S~imlr~ls 196 (196)
T PF13718_consen 174 VYLGQTRNEASGEHSAIMLRPLS 196 (196)
T ss_dssp EEE-SS--TTT---EEEEEEE--
T ss_pred EEEecCcccccCceeeeEEeecC
Confidence 985444221 3688899998764
No 61
>PF08444 Gly_acyl_tr_C: Aralkyl acyl-CoA:amino acid N-acyltransferase, C-terminal region; InterPro: IPR013652 This entry represents mammalian-specific glycine N-acyltransferase (also called aralkyl acyl-CoA:amino acid N-acyltransferase; 2.3.1.13 from EC). Mitochondrial acyltransferases catalyse the transfer of an acyl group from acyl-CoA to the N terminus of glycine to produce N-acylglycine. These enzymes can conjugate a multitude of substrates to form a variety of N-acylglycines. The CoA derivatives of a number of aliphatic and aromatic acids, but not phenylacetyl-CoA or (indol-3-yl)acetyl-CoA, can act as donor [, ].
Probab=99.06 E-value=4.6e-10 Score=73.14 Aligned_cols=76 Identities=22% Similarity=0.285 Sum_probs=68.6
Q ss_pred ecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcC
Q 028270 48 DYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLG 127 (211)
Q Consensus 48 ~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~G 127 (211)
+.+|++|.++.... .+.+..-++.|+|||||+.+.++....+.+.+ .|+. ++.+|.+.|..++++.++ +|
T Consensus 5 gpeG~PVSW~lmdq-------tge~rmgyTlPeyR~~G~~~~v~~~~~~~L~~-~g~P-~Y~hv~~~N~~~~r~~~~-lg 74 (89)
T PF08444_consen 5 GPEGNPVSWSLMDQ-------TGEMRMGYTLPEYRGQGLMSQVMYHLAQYLHK-LGFP-FYGHVDEDNEASQRLSKS-LG 74 (89)
T ss_pred CCCCCEeEEEEecc-------cccccccccCHhHhcCCHHHHHHHHHHHHHHH-CCCC-eEeehHhccHHHHHHHHH-CC
Confidence 34789998877766 67788889999999999999999999999999 8998 999999999999999999 99
Q ss_pred ceEece
Q 028270 128 YKIHDV 133 (211)
Q Consensus 128 F~~~~~ 133 (211)
|.....
T Consensus 75 ~~~~pc 80 (89)
T PF08444_consen 75 FIFMPC 80 (89)
T ss_pred CeecCC
Confidence 997763
No 62
>PF12746 GNAT_acetyltran: GNAT acetyltransferase; PDB: 3G3S_B.
Probab=99.04 E-value=5.2e-09 Score=82.64 Aligned_cols=91 Identities=20% Similarity=0.143 Sum_probs=66.8
Q ss_pred CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHH
Q 028270 41 QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFN 120 (211)
Q Consensus 41 ~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~ 120 (211)
+..|++.. +|+||+.|........ ..-..|.++|+|||||+|+.+-.+++..|.+ .|..-.| .+ .|.++++
T Consensus 165 G~Gf~i~~-~~~iVs~~~s~~~~~~----~~EI~I~T~~~yR~kGLA~~~aa~~I~~Cl~-~~l~P~W-Dc--~N~~S~~ 235 (265)
T PF12746_consen 165 GFGFCILH-DGEIVSGCSSYFVYEN----GIEIDIETHPEYRGKGLATAVAAAFILECLE-NGLYPSW-DC--HNLASIA 235 (265)
T ss_dssp --EEEEEE-TTEEEEEEEEEEEETT----EEEEEEEE-CCCTTSSHHHHHHHHHHHHHHH-TT-EEE--EE--SSHHHHH
T ss_pred CcEEEEEE-CCEEEEEEEEEEEECC----EEEEEEEECHHhhcCCHHHHHHHHHHHHHHH-CCCCcCe-eC--CCHHHHH
Confidence 45677776 8899887777666553 3445889999999999999999999999999 7876544 33 6999999
Q ss_pred HHhhhcCceEeceeeccccCC
Q 028270 121 LYTETLGYKIHDVEAKYYADG 141 (211)
Q Consensus 121 ~Y~k~~GF~~~~~~~~~~~~~ 141 (211)
+-+| +||+.......|+.++
T Consensus 236 lA~k-LGf~~~~~Y~~Y~v~~ 255 (265)
T PF12746_consen 236 LAEK-LGFHFDFEYTAYEVNN 255 (265)
T ss_dssp HHHH-CT--EEEEEEEE----
T ss_pred HHHH-cCCcccceeeeeeecc
Confidence 9999 9999999888887654
No 63
>KOG3397 consensus Acetyltransferases [General function prediction only]
Probab=98.97 E-value=6.9e-09 Score=75.18 Aligned_cols=84 Identities=20% Similarity=0.288 Sum_probs=69.3
Q ss_pred EEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhh
Q 028270 45 VAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 45 v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k 124 (211)
+......++||...+........ ..++..++|+.+.||+|+|+.||+.+..|++. .|++.++|.+... .+||++
T Consensus 60 Ll~E~~~~VigH~rLS~i~n~~~-al~VEsVVV~k~~RG~GFGk~lMk~~E~~~R~-~gf~~~yLsT~DQ----~~FYe~ 133 (225)
T KOG3397|consen 60 LLNEENDEVLGHSRLSHLPNRDH-ALWVESVVVKKDQRGLGFGKFLMKSTEKWMRE-KGFNEAYLSTDDQ----CRFYES 133 (225)
T ss_pred eecccccceeeeeccccCCCCCc-eeEEEEEEEehhhccccHHHHHHHHHHHHHHH-hhhhheeeecccc----hhhhhh
Confidence 33334578999988877665554 78999999999999999999999999999999 7999999987652 579999
Q ss_pred hcCceEeceee
Q 028270 125 TLGYKIHDVEA 135 (211)
Q Consensus 125 ~~GF~~~~~~~ 135 (211)
+||+...-..
T Consensus 134 -lGYe~c~Pi~ 143 (225)
T KOG3397|consen 134 -LGYEKCDPIV 143 (225)
T ss_pred -hcccccCcee
Confidence 9998765333
No 64
>PF12568 DUF3749: Acetyltransferase (GNAT) domain; InterPro: IPR024612 This domain is found in uncharacterised proteins from Gammaproteobacteria, and is approximately 40 amino acids in length. It contains two completely conserved residues (D and I) that may be functionally important. Proteins having this domain are frequently annotated as acetyltransferases of the GNAT family; however there is little accompanying annotation to confirm this.; PDB: 2K5T_A.
Probab=98.95 E-value=5.3e-08 Score=67.64 Aligned_cols=119 Identities=14% Similarity=0.126 Sum_probs=70.9
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCc
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTH 81 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~ 81 (211)
++|.+++.-+.....+|.+.. |......+...+.....+|.+.. |++++|.+.+..... .+.+..+.|.+--
T Consensus 2 LTI~rl~~ls~Qd~iDL~KIw---p~~~~~~l~~~l~~~~~l~aArF-NdRlLgAv~v~~~~~----~~~L~~l~VRevT 73 (128)
T PF12568_consen 2 LTIERLTTLSEQDRIDLAKIW---PQQDPEQLEQWLDEGHRLFAARF-NDRLLGAVKVTISGQ----QAELSDLCVREVT 73 (128)
T ss_dssp -EEEE-SS--HHHHHHHHHH----TTS----------SSEEEEEEEE-TTEEEEEEEEEEETT----EEEEEEEEE-TT-
T ss_pred eEEEEcCCCCHHHHHHHHHhC---CCCCHHHHHHHhccCCeEEEEEe-chheeeeEEEEEcCc----ceEEeeEEEeecc
Confidence 355555433334444433332 22222233555566777888888 999999999998776 7899999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEec---Cc-HHHHHHHhhhcCceEec
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRK---SN-RAAFNLYTETLGYKIHD 132 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~---~N-~~a~~~Y~k~~GF~~~~ 132 (211)
|++|+|..|++.+++.+ .+++..++.... .+ ..+..|-+. +||...+
T Consensus 74 RrRGVG~yLlee~~rq~---p~i~~w~l~~~~~~~~~~~~~~~Fm~a-~GF~~~~ 124 (128)
T PF12568_consen 74 RRRGVGLYLLEEVLRQL---PDIKHWWLADEGVEPQDRAVMAAFMQA-CGFSAQS 124 (128)
T ss_dssp SSSSHHHHHHHHHHHHS----S--EEEE--TT-S--THHHHHHHHHH-HT-EE-S
T ss_pred ccccHHHHHHHHHHHHC---CCCcEEEEecCCCcccchHHHHHHHHH-cCccccC
Confidence 99999999999999987 467767764432 23 355678888 9997654
No 65
>TIGR01211 ELP3 histone acetyltransferase, ELP3 family. The Saccharomyces cerevisiae member YPL086C has been characterized in vitro as an N-terminal acetyltransferase for all four core histones. It is a component of the RNA polymerase II holoenzyme, designated Elp3p for Elongator Protein 3. Members of this family are found in eukaryotes and archaea. These proteins are part of the larger set of GNAT acetyltransferases.
Probab=98.89 E-value=1.4e-08 Score=87.65 Aligned_cols=86 Identities=16% Similarity=0.356 Sum_probs=66.5
Q ss_pred EEEEEe--cCCcEEEEEEEEEecCCC-----ceeEEEEEEEE-----------cCCccccCHHHHHHHHHHHHHHHhcCC
Q 028270 43 LYVAED--YNGRIVGYVLAKMEEESN-----ECHGHITSLAV-----------LRTHRKLGLATKLMNAAQSAMEQVFGA 104 (211)
Q Consensus 43 ~~v~~~--~~g~ivG~~~~~~~~~~~-----~~~~~i~~l~V-----------~p~~rg~Gig~~Ll~~~~~~~~~~~g~ 104 (211)
.|..+. .++.++|++.+....... ...++|..+.| +++|||+|+|++||+++++.+++ .|+
T Consensus 413 ~F~~y~~~~~~~l~G~lrlr~~~~~~~~~~~~~~a~IrelhV~G~~~~~~~~~~~~~rg~GiG~~Ll~~ae~~Ar~-~G~ 491 (522)
T TIGR01211 413 FFLSYEDPKNDILIGFLRLRFPSEPAHRKEVDATALVRELHVYGSEVPIGERGDDEWQHRGYGRRLLEEAERIAAE-EGS 491 (522)
T ss_pred EEEEEEcCCCCeEEEEEEEecCcccccccccCCCceEEEEEEeeeeccccccCChhHhCcCHHHHHHHHHHHHHHH-CCC
Confidence 444443 246899999998875421 11455555553 48999999999999999999999 799
Q ss_pred cEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 105 EYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 105 ~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+.+++.+ |..|+.||++ +||+..+.
T Consensus 492 ~~i~v~s---~~~A~~FY~k-lGf~~~g~ 516 (522)
T TIGR01211 492 EKILVIS---GIGVREYYRK-LGYELDGP 516 (522)
T ss_pred CEEEEee---CchHHHHHHH-CCCEEEcc
Confidence 9998743 6789999999 99998873
No 66
>cd04301 NAT_SF N-Acyltransferase superfamily: Various enzymes that characteristically catalyze the transfer of an acyl group to a substrate. NAT (N-Acyltransferase) is a large superfamily of enzymes that mostly catalyze the transfer of an acyl group to a substrate and are implicated in a variety of functions, ranging from bacterial antibiotic resistance to circadian rhythms in mammals. Members include GCN5-related N-Acetyltransferases (GNAT) such as Aminoglycoside N-acetyltransferases, Histone N-acetyltransferase (HAT) enzymes, and Serotonin N-acetyltransferase, which catalyze the transfer of an acetyl group to a substrate. The kinetic mechanism of most GNATs involves the ordered formation of a ternary complex: the reaction begins with Acetyl Coenzyme A (AcCoA) binding, followed by binding of substrate, then direct transfer of the acetyl group from AcCoA to the substrate, followed by product and subsequent CoA release. Other family members include Arginine/ornithine N-succinyltransfera
Probab=98.88 E-value=2.1e-08 Score=60.88 Aligned_cols=63 Identities=33% Similarity=0.465 Sum_probs=53.0
Q ss_pred EEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEE
Q 028270 44 YVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSL 109 (211)
Q Consensus 44 ~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l 109 (211)
+++.. +++++|++.+....... +..++..++|+|+|||+|+|+.++..+++++++ .+.+.+.+
T Consensus 2 ~~~~~-~~~~ig~~~~~~~~~~~-~~~~l~~~~v~~~~~~~g~~~~~~~~~~~~~~~-~~~~~v~~ 64 (65)
T cd04301 2 LVAED-DGEIVGFASLSPDGSGG-DTAYIGDLAVLPEYRGKGIGSALLEAAEEEARE-RGAKRLRL 64 (65)
T ss_pred EEEec-CCEEEEEEEEEecCCCC-ccEEEEEEEECHHHcCcCHHHHHHHHHHHHHHH-cCCcEEEe
Confidence 34444 78999999998876422 278898999999999999999999999999998 78888775
No 67
>COG3818 Predicted acetyltransferase, GNAT superfamily [General function prediction only]
Probab=98.79 E-value=1.5e-08 Score=70.02 Aligned_cols=128 Identities=20% Similarity=0.207 Sum_probs=87.5
Q ss_pred CeEEEeCChhhHHHHHHhhhhcC-CccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC------------c
Q 028270 1 MVCIRKATVDDLLAMQACNLFCL-PENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN------------E 67 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~-~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~------------~ 67 (211)
|+.|+.+...|..++..|++..- .-.|-...-+..+.... |++.. +|.+.|+++.......- .
T Consensus 7 p~~~~D~~apd~aavLaLNNeha~elswLe~erL~~l~~eA---F~ArR-~G~l~afl~tFd~~a~ydSpNFlWFrErYe 82 (167)
T COG3818 7 PILIRDVRAPDLAAVLALNNEHALELSWLELERLYRLYKEA---FVARR-DGNLAAFLVTFDSSARYDSPNFLWFRERYE 82 (167)
T ss_pred ceehhhhcCCchhhHHhccchhhhhccccCHHHHHHHHHHH---HHHhh-ccchhhheeeccccccCCCCceeehhhhCC
Confidence 36788888889999998876632 11221111111111111 24433 55555544332221110 1
Q ss_pred eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEe--cCcHHHHHHHhhhcCceEecee
Q 028270 68 CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVR--KSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 68 ~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~--~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+..++..+.|...-||+|+|++|...+..++.. .|...+.++|. +.|+.+..|.-. +||.+++..
T Consensus 83 ~F~YvDRvVVA~~aRGrG~aRalY~Dlf~~Ae~-agy~~~tCEVn~DppnpasdaFHaa-lGF~eVG~a 149 (167)
T COG3818 83 NFFYVDRVVVASRARGRGVARALYADLFSYAEL-AGYPYLTCEVNLDPPNPASDAFHAA-LGFHEVGQA 149 (167)
T ss_pred ceEEEEEEEEEecccccchHHHHHHHHHHHHHh-cCCceEEEEecCCCCChHHHHHhhh-cCceEccce
Confidence 378899999999999999999999999999998 89999988775 668999999999 999999843
No 68
>COG1444 Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=98.70 E-value=5.9e-07 Score=79.76 Aligned_cols=116 Identities=15% Similarity=0.237 Sum_probs=85.3
Q ss_pred HhcCCC-eEEEEEecCCcEEEEEEEEEecCCCc---------------------------------eeEEEEEEEEcCCc
Q 028270 36 ILSWPQ-LLYVAEDYNGRIVGYVLAKMEEESNE---------------------------------CHGHITSLAVLRTH 81 (211)
Q Consensus 36 ~~~~~~-~~~v~~~~~g~ivG~~~~~~~~~~~~---------------------------------~~~~i~~l~V~p~~ 81 (211)
++..|. .++++...++++|+.+.+-....... ....|..|+|+|++
T Consensus 464 L~DaP~h~~~al~~~~~~~va~~qva~EG~l~~~~i~~~~~g~r~~GnlIp~~l~~~~~~~~fa~l~G~RIvRIAvhPe~ 543 (758)
T COG1444 464 LLDAPHHHIFALRAPEGKPVAVWQVAEEGGLSDELIDIWLGGRRPRGNLIPDLLAKHHRDPEFAKLVGWRIVRIAVHPEL 543 (758)
T ss_pred HhcCCCCeeEEEEcCCCceEEEEEeeccCCCcHHHHHHHhcCCCCCCcccHHHHHHhhcchhhcccceeeEEEEEeCHHH
Confidence 333443 46666664558888887766655411 34669999999999
Q ss_pred cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeecccc-CCcceeeeeecccCCC
Q 028270 82 RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYA-DGEDAYDMRKQLKGKQ 155 (211)
Q Consensus 82 rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~-~~~d~~~m~k~l~~~~ 155 (211)
|++|||++||+.+++++.+ |++.+.... --++...+||.| +||.++........ .|+...+|.|.|++..
T Consensus 544 q~~GiGsrlL~~l~~~a~~--~~DwlgvsF-G~t~~L~rFW~r-nGF~pVhls~~rn~~SGeys~i~lkpLs~~~ 614 (758)
T COG1444 544 QRMGIGSRLLALLIEEARK--GLDWLGVSF-GYTEELLRFWLR-NGFVPVHLSPTRNASSGEYTAIVLKPLSDAG 614 (758)
T ss_pred HhcCHHHHHHHHHHHHHhc--CCCEEeecc-CCCHHHHHHHHH-cCeEEEEecCccCcCCCceeEEEEecCCHHH
Confidence 9999999999999999963 777444332 335578999999 99999996665433 2678899999887654
No 69
>PF14542 Acetyltransf_CG: GCN5-related N-acetyl-transferase; PDB: 2H5M_A 2Q44_A 1XMT_A 2Q4Y_A 2IL4_A 2EVN_A 1R57_A.
Probab=98.69 E-value=5.9e-07 Score=57.98 Aligned_cols=69 Identities=20% Similarity=0.186 Sum_probs=53.5
Q ss_pred EEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhh
Q 028270 45 VAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 45 v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k 124 (211)
.+.. +|+.+|++.+..... ...|....|.|++||+|+|++|++.+++++++ .|.+ |. +.-.-+.+++++
T Consensus 3 ~~~~-~g~~~a~l~Y~~~~~----~~~i~hT~V~~~~rGqGia~~L~~~~l~~a~~-~~~k-v~----p~C~y~~~~~~~ 71 (78)
T PF14542_consen 3 ELKD-DGEEIAELTYREDGG----VIVITHTEVPPELRGQGIAKKLVEAALDYARE-NGLK-VV----PTCSYVAKYFRR 71 (78)
T ss_dssp EEES-STTEEEEEEEEESSS----EEEEEEEEE-CSSSTTTHHHHHHHHHHHHHHH-TT-E-EE----ETSHHHHHHHHH
T ss_pred EEEE-CCEEEEEEEEEeCCC----EEEEEEEEECccccCCcHHHHHHHHHHHHHHH-CCCE-EE----EECHHHHHHHHh
Confidence 3444 688999999977333 88999999999999999999999999999999 6876 33 444556666666
No 70
>KOG4135 consensus Predicted phosphoglucosamine acetyltransferase [Carbohydrate transport and metabolism]
Probab=98.69 E-value=1.2e-06 Score=62.14 Aligned_cols=81 Identities=14% Similarity=0.191 Sum_probs=69.5
Q ss_pred cEEEEEEEEEecCCC-------ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhh
Q 028270 52 RIVGYVLAKMEEESN-------ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 52 ~ivG~~~~~~~~~~~-------~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k 124 (211)
..||-+.+....... ...+.+..+..-|..||+|+|+.++..++.|+....++.+....+...|.+++++++|
T Consensus 83 ~MvGDvNlFlt~~~~~~n~s~~~~~gE~EvMIAEP~~RgKG~G~eav~~ml~y~~s~l~l~Ky~vkig~~nk~sl~lFkk 162 (185)
T KOG4135|consen 83 HMVGDVNLFLTTSPDTENPSDDVITGEVEVMIAEPRGRGKGIGTEAVRAMLAYAYSVLKLDKYEVKIGMDNKPSLRLFKK 162 (185)
T ss_pred hhccceeeEEecCCCcCCcccceeeeeEEEEEecccccCCCccHHHHHHHHHHHHHHhhhheEEEEecCCCchHHHHHHH
Confidence 478888776654443 1467787888889999999999999999999998789999999999999999999999
Q ss_pred hcCceEece
Q 028270 125 TLGYKIHDV 133 (211)
Q Consensus 125 ~~GF~~~~~ 133 (211)
++|..+..
T Consensus 163 -~~f~q~~~ 170 (185)
T KOG4135|consen 163 -FLFTQVFY 170 (185)
T ss_pred -hhheeeee
Confidence 99998875
No 71
>COG3375 Uncharacterized conserved protein [Function unknown]
Probab=98.56 E-value=3.1e-06 Score=64.10 Aligned_cols=138 Identities=14% Similarity=0.097 Sum_probs=102.5
Q ss_pred eEEEeCC-hhhHHHHHHhhhhcCCccc---hhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE
Q 028270 2 VCIRKAT-VDDLLAMQACNLFCLPENY---QMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV 77 (211)
Q Consensus 2 i~ir~~~-~~D~~~l~~l~~~~~~~~~---~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V 77 (211)
+.+|.++ +.+++++.+++...|...- .....+..+....+.+..+...+|++||.....+......-..+-..++|
T Consensus 3 vvvrrl~dp~el~~~~dV~~~aWg~~d~~~~~~d~i~al~~~GGlvlgAf~~dg~lVGls~G~pg~r~g~~y~ySH~~gV 82 (266)
T COG3375 3 VVVRRLTDPAELDEAEDVQASAWGSEDRDGAPADTIRALRYHGGLVLGAFSADGRLVGLSYGYPGGRGGSLYLYSHMLGV 82 (266)
T ss_pred eeEEecCCHHHHHHHHHHHHHHhCccccccchHHHHHHHHhcCCeEEEEEcCCCcEEEEEeccCCcCCCceeeeeeehhc
Confidence 5677775 8888899998888775321 22333345555667778888766799999999883322222566678899
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD 140 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~ 140 (211)
.|+++++|+|-+|-..--+++.. +|+..|.++.++.|..-.+|--.|+|-.-.-..++||..
T Consensus 83 ~e~~k~sglg~aLK~~Qre~a~~-~G~tli~WTfDPl~alNA~fNi~KLGa~artYi~nfYg~ 144 (266)
T COG3375 83 REEVKGSGLGVALKMKQRERALS-MGYTLIAWTFDPLNALNARFNISKLGAIARTYIKNFYGE 144 (266)
T ss_pred cccccccchhhhhHHHHHHHHHh-cCeeeEEEecccchhhhhhcchhhhceeEEEeeccccch
Confidence 99999999999999999999999 899999999999887444444333887777777777764
No 72
>COG4552 Eis Predicted acetyltransferase involved in intracellular survival and related acetyltransferases [General function prediction only]
Probab=98.36 E-value=2.3e-06 Score=69.08 Aligned_cols=90 Identities=17% Similarity=0.094 Sum_probs=69.8
Q ss_pred CCCeEEEEEecCCcEEEEEEEEEecCCC----ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecC
Q 028270 39 WPQLLYVAEDYNGRIVGYVLAKMEEESN----ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKS 114 (211)
Q Consensus 39 ~~~~~~v~~~~~g~ivG~~~~~~~~~~~----~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~ 114 (211)
.....+++.. +.++++-....+..-++ .+...|..+++.|+|||+|+.++||.+.++...+ .|.....|+ +.
T Consensus 37 ~~~n~~vi~~-nqkl~s~L~i~~f~~~f~~q~l~t~GIa~Vas~P~~R~~G~~~~Ll~~sLre~~~-kG~p~s~L~--P~ 112 (389)
T COG4552 37 AEPNSYVIYM-NQKLASRLHIPPFIFWFGNQVLPTAGIAGVASAPTYRRRGALRALLAHSLREIAR-KGYPVSALH--PF 112 (389)
T ss_pred cCCcceEEee-hhhhhhcccccchheeeCCeeeeccceEEEEechhhccCcHHHHHHHHHHHHHHH-cCCeeEEec--cC
Confidence 3445667766 77888877665433222 1478899999999999999999999999999998 899877776 43
Q ss_pred cHHHHHHHhhhcCceEeceeec
Q 028270 115 NRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 115 N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
..+||+| +||...+....
T Consensus 113 ---s~~iYrK-fGye~asn~~~ 130 (389)
T COG4552 113 ---SGGIYRK-FGYEYASNYHE 130 (389)
T ss_pred ---chhhHhh-ccccccceEEE
Confidence 3679999 99998886544
No 73
>COG2388 Predicted acetyltransferase [General function prediction only]
Probab=98.27 E-value=4.9e-06 Score=55.77 Aligned_cols=63 Identities=24% Similarity=0.200 Sum_probs=53.5
Q ss_pred CCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcE
Q 028270 39 WPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEY 106 (211)
Q Consensus 39 ~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~ 106 (211)
..+.+|++.+ +|..+|.+........ ...|..-.|.+++||+|+|++|+.++++.+++ .|.+.
T Consensus 13 ~~~~~y~~~~-~G~~~~e~~y~~~~~~---~i~i~HT~V~d~lrGqGia~~L~~~al~~ar~-~g~ki 75 (99)
T COG2388 13 GENGRYVLTD-EGEVIGEATYYDRGEN---LIIIDHTYVPDELRGQGIAQKLVEKALEEARE-AGLKI 75 (99)
T ss_pred cCceEEEEec-CCcEEEEEEEecCCCC---EEEEecCcCCHHHcCCcHHHHHHHHHHHHHHH-cCCeE
Confidence 3455677776 8999999988887754 68889999999999999999999999999999 78763
No 74
>COG5628 Predicted acetyltransferase [General function prediction only]
Probab=98.10 E-value=6e-05 Score=51.58 Aligned_cols=80 Identities=16% Similarity=0.228 Sum_probs=59.3
Q ss_pred EEEEEecCCcEEEEEEEEEecCCCc-eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHH
Q 028270 43 LYVAEDYNGRIVGYVLAKMEEESNE-CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNL 121 (211)
Q Consensus 43 ~~v~~~~~g~ivG~~~~~~~~~~~~-~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~ 121 (211)
.|+... +|.+||++.+........ ....+..+.+...|||+|+|++...++....+ |. ..+.+.++|.+|+.|
T Consensus 39 ~~~~~~-~~~~igf~l~L~~~~~~~~iD~~~~efFIi~k~~~~GvGR~aaK~If~~~~---g~--w~Va~i~EN~PA~~f 112 (143)
T COG5628 39 AWLFRI-GGLPVGFALVLDLAHSPTPIDRAVAEFFIVRKHRRRGVGRAAAKAIFGSAW---GV--WQVATVRENTPARAF 112 (143)
T ss_pred eeEEEE-CCceeeeeeeecccCCCCcccccchheEeeehhhccchhHHHHHHHHHHhh---ce--EEEEEeccCChhHHH
Confidence 344444 889999998766544332 24567788999999999999999998887653 33 344567899999999
Q ss_pred HhhhcCce
Q 028270 122 YTETLGYK 129 (211)
Q Consensus 122 Y~k~~GF~ 129 (211)
+++ .-..
T Consensus 113 wK~-~~~t 119 (143)
T COG5628 113 WKR-VAET 119 (143)
T ss_pred HHh-hhcc
Confidence 999 5443
No 75
>PF04958 AstA: Arginine N-succinyltransferase beta subunit; InterPro: IPR007041 Arginine N-succinyltransferase catalyses the transfer of succinyl-CoA to arginine to produce succinylarginine. This is the first step in arginine catabolism via the arginine succinyltransferase pathway. Six major L-arginine-degrading pathways have been described for prokaryotes []. Many bacteria arginine succinyltransferase 2.3.1.109 from EC, which is the AstA protein of the succinyltransferase (ast) pathway operon consists of five genes. In a few species, such as Pseudomonas aeruginosa, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST). This entry represents the family of proteins that make up the beta subunit of the heterodimer of Ast and AOST.; GO: 0008791 arginine N-succinyltransferase activity, 0006527 arginine catabolic process; PDB: 1YLE_A.
Probab=98.06 E-value=8.7e-05 Score=60.61 Aligned_cols=100 Identities=22% Similarity=0.154 Sum_probs=60.3
Q ss_pred CeEEEeCChhhHHHHHHhhhhcC------Cccc---------hhHHHHHHHhc---CCCeEEEEEe-cCCcEEEEEEEEE
Q 028270 1 MVCIRKATVDDLLAMQACNLFCL------PENY---------QMKYYFYHILS---WPQLLYVAED-YNGRIVGYVLAKM 61 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~------~~~~---------~~~~~~~~~~~---~~~~~~v~~~-~~g~ivG~~~~~~ 61 (211)
|+.|||++.+|+++|.+|....- |.+. +...|...... +...+||+++ +.|+|||++.+.-
T Consensus 1 M~viRp~~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sFa~~~~~~~~~~~YlfVLED~~tg~vvGts~I~a 80 (342)
T PF04958_consen 1 MLVIRPARPSDLDALYALARESGPGFTSLPPDREALAERIERSERSFAGRDVDFPGDEGYLFVLEDTETGEVVGTSAIEA 80 (342)
T ss_dssp -EEEEE--GGGHHHHHHHHHHS-TT-TTS-S-HHHHHHHHHHHHHHHH-TT----S--EEEEEEEETTT--EEEEEEEES
T ss_pred CeEEecCchhhHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhhccccCCCCccceEEEEEecCCCcEEEEEeEEe
Confidence 99999999999999999977642 2211 11111111111 2235677776 3599999999875
Q ss_pred ecCCCc---------------------------------eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 62 EEESNE---------------------------------CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 62 ~~~~~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
...... ...++..+.++|+||+-|.|+.|-..-+-.+.+
T Consensus 81 ~vG~~~PfY~yr~~~~vh~S~~L~v~~~~~~L~L~~d~tG~sEl~tLfL~p~~R~~~~G~lLSr~RfLFiA~ 152 (342)
T PF04958_consen 81 AVGLDEPFYSYRVSTLVHASRELGVRNRHETLTLSNDYTGCSELCTLFLDPDYRGGGNGRLLSRSRFLFIAQ 152 (342)
T ss_dssp STTSSS---EEEEEEEEEEETTTTEEEEEEEEEEE-TTTTSEEEEEEEE-GGGTTSHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCcEEEEcCceeEcCcccCCccceeeEeeecCCCCCeeeEEEEECHHHcCCchHHHHHHHHHHHHHh
Confidence 543321 246699999999999999999887766555443
No 76
>PRK10456 arginine succinyltransferase; Provisional
Probab=98.02 E-value=5.8e-05 Score=61.50 Aligned_cols=96 Identities=22% Similarity=0.196 Sum_probs=63.7
Q ss_pred CeEEEeCChhhHHHHHHhhhhcC------Cccc---------hhHHHHHHHh-cCCCeEEEEEe-cCCcEEEEEEEEEec
Q 028270 1 MVCIRKATVDDLLAMQACNLFCL------PENY---------QMKYYFYHIL-SWPQLLYVAED-YNGRIVGYVLAKMEE 63 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~------~~~~---------~~~~~~~~~~-~~~~~~~v~~~-~~g~ivG~~~~~~~~ 63 (211)
|+.|||++..|+++|.+|....= |.+. +...|....- .....+||+++ +.|+|||++.+.-..
T Consensus 1 M~vvRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~v 80 (344)
T PRK10456 1 MMVIRPVERSDLAALMQLAGKTGGGLTSLPANEATLAARIERALKTWQGELPKSEQGYVFVLEDSETGTVAGICAIEVAV 80 (344)
T ss_pred CeEEecCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCcEEEEEeEEecc
Confidence 89999999999999999976642 2221 1111100000 12245677775 458999999887553
Q ss_pred CCCc---------------------------------eeEEEEEEEEcCCccccCHHHHHHHHHHH
Q 028270 64 ESNE---------------------------------CHGHITSLAVLRTHRKLGLATKLMNAAQS 96 (211)
Q Consensus 64 ~~~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 96 (211)
.... ....|..+.++|+||+-|.|+.|-..=+-
T Consensus 81 G~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfl~p~~R~~~~G~LLSr~RfL 146 (344)
T PRK10456 81 GLNDPWYNYRVGTLVHASKELNVYNALPTLFLSNDHTGSSELCTLFLDPDWRKEGNGYLLSKSRFM 146 (344)
T ss_pred cCCCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCceeEEEEECHHHcCCCchhHHHHHHHH
Confidence 3321 24569999999999999998877654433
No 77
>PF00765 Autoind_synth: Autoinducer synthetase; InterPro: IPR001690 Bacterial species have many methods of controlling gene expression and cell growth. Regulation of gene expression in response to changes in cell density is termed quorum sensing [, ]. Quorum-sensing bacteria produce, release and respond to hormone-like molecules (autoinducers) that accumulate in the external environment as the cell population grows. Once a threshold of these molecules is reached, a signal transduction cascade is triggered that ultimately leads to behavioural changes in the bacterium []. Autoinducers are thus clearly important mediators of molecular communication. Conjugal transfer of Agrobacterium octopine-type Ti plasmids is activated by octopine, a metabolite released from plant tumours []. Octopine causes conjugal donors to secrete a pheromone, Agrobacterium autoinducer (AAI), and exogenous AAI further stimulates conjugation. The putative AAI synthase and an AAI-responsive transcriptional regulator have been found to be encoded by the Ti plasmid traI and traR genes, respectively. TraR and TraI are similar to the LuxR and LuxI regulatory proteins of Vibrio fischeri, and AAI is similar in structure to the diffusable V. fischeri autoinducer, the inducing ligand of LuxR. TraR activates target genes in the presence of AAI and also activates traR and traI themselves, creating two positive-feedback loops. TraR-AAI-mediated activation in wild-type Agrobacterium strains is enhanced by culturing on solid media, suggesting a possible role in cell density sensing []. Production of light by the marine bacterium V. fischeri and by recombinant hosts containing cloned lux genes is controlled by the density of the culture []. Density-dependent regulation of lux gene expression has been shown to require a locus consisting of the luxR and luxI genes. In these and other Gram-negative bacteria, N-(3-oxohexanoyl)-L-homoserine lactone (OHHL) acts as the autoinducer by binding to transcriptional regulatory proteins and activating them []. OHHL and related molecules, such as N-butanoyl- (BHL), N-hexanoyl- (HHL) and N-oxododecanoyl- (PAI) homoserine lactones, are produced by a family of proteins that share a high level of sequence similarity. Proteins which currently members of this family include: luxI from V. fischeri. ahyI and asaI from Aeromonas species, which synthesize BHL and whose targets are ahyR and asaR respectively. carI from Erwinia carotovora. The target of OHHL is carR which activates genes involved in the biosynthesis of carbapenem antibiotics. eagI from Enterobacter agglomerans. The target of OHHL is not yet known. esaI from Erwinia stewartii. expI from Erwinia carotovora. lasI from Pseudomonas aeruginosa, which synthesizes PAI and whose target is lasR which activates the transcription of the elastase gene. rhlI (or vsmI) from P. aeruginosa, which synthesizes BHL and HHL and whose target is rhlR. swrI from Serratia liquefaciens, which synthesizes BHL. yenI from Yersinia enterocolitica. ; GO: 0007165 signal transduction; PDB: 3P2H_A 3P2F_A 1KZF_A 1K4J_A 1RO5_A.
Probab=97.98 E-value=0.0002 Score=53.82 Aligned_cols=139 Identities=12% Similarity=0.085 Sum_probs=90.8
Q ss_pred ChhhHHHHHHhhhhcCCc--cchhHH---HHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC----------------
Q 028270 8 TVDDLLAMQACNLFCLPE--NYQMKY---YFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN---------------- 66 (211)
Q Consensus 8 ~~~D~~~l~~l~~~~~~~--~~~~~~---~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~---------------- 66 (211)
..+++.++.++....|-+ .|.... +....+.++...|++..++|+++|++.+.+...+.
T Consensus 6 ~~~~l~~~~rlR~~vFv~rlgW~v~~~dg~E~DqyD~~~~~ylv~~~~g~v~g~~RLlptt~p~ML~~~F~~ll~~~~~p 85 (182)
T PF00765_consen 6 SRRLLEEMFRLRHRVFVDRLGWDVPCEDGMEIDQYDDPDAVYLVALDDGRVVGCARLLPTTGPYMLSDVFPHLLPDGPAP 85 (182)
T ss_dssp HHHHHHHHHHHHHHHHTTCSCCCHHCCTSEE--TTGCTT-EEEEEEETTEEEEEEEEEETTS--HHHHCTGGGHTTS---
T ss_pred CHHHHHHHHHHHHHHHHHhhCCCCcCCCCcEeeecCCCCCeEEEEEECCEEEEEeeeccCCCcchhhhHHHHHhCCCCCC
Confidence 456778888888888753 343221 12233345556665554579999999998875442
Q ss_pred --ceeEEEEEEEEcCCccc------cCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccc
Q 028270 67 --ECHGHITSLAVLRTHRK------LGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYY 138 (211)
Q Consensus 67 --~~~~~i~~l~V~p~~rg------~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~ 138 (211)
...+++..++|+++.++ .-+...|+..+++++.+ .|++.++..+.. ...+++++ .||.....-...-
T Consensus 86 ~~~~vwE~SRf~v~~~~~~~~~~~~~~~~~~L~~~~~e~a~~-~gi~~~v~V~~~---~~~r~l~r-~G~~~~~lG~~~~ 160 (182)
T PF00765_consen 86 RSPDVWELSRFCVDPDRRRSRAGSRSPVTMELLLGMVEFALS-NGIRHIVGVVDP---AMERILRR-AGWPVRRLGPPRS 160 (182)
T ss_dssp SSTTEEEEEEEEE-HCCCHHCHSCC-THHHHHHHHHHHHHHC-TT-SEEEEEEEH---HHHHHHHH-CT-EEEESSEEEE
T ss_pred CCCcceeeeEEEEcccccccccccccHHHHHHHHHHHHHHHH-CCCCEEEEEECh---HHHHHHHH-cCCceEECCCCee
Confidence 14688999999988532 24778999999999999 899999988876 78999999 9999776444332
Q ss_pred cCCcceeeeeecc
Q 028270 139 ADGEDAYDMRKQL 151 (211)
Q Consensus 139 ~~~~d~~~m~k~l 151 (211)
.+++..+.....+
T Consensus 161 ~~~~~~~a~~i~v 173 (182)
T PF00765_consen 161 IGGERVVALLIPV 173 (182)
T ss_dssp ETTEEEEEEEEE-
T ss_pred eCCeEEEEEEEEC
Confidence 3344444444443
No 78
>COG0454 WecD Histone acetyltransferase HPA2 and related acetyltransferases [Transcription / General function prediction only]
Probab=97.86 E-value=2.7e-05 Score=52.36 Aligned_cols=44 Identities=32% Similarity=0.455 Sum_probs=40.3
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCc
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGY 128 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF 128 (211)
++|+|+|||+|+|+.|+..+++++.. .|.. .|..+..+|.+ +||
T Consensus 87 l~v~~~~rg~Gig~~Ll~~~~~~~~~-~g~~--------~~~~~~~~~~~-~~~ 130 (156)
T COG0454 87 LYVLPEYRGKGIGSALLEAALEWARK-RGIS--------LNRLALEVYEK-NGF 130 (156)
T ss_pred EEecchhhccchHHHHHHHHHHHHHH-cCce--------ehHHHHHHHHh-cCC
Confidence 99999999999999999999999988 6665 67788999999 999
No 79
>PF13480 Acetyltransf_6: Acetyltransferase (GNAT) domain
Probab=97.78 E-value=0.0015 Score=46.24 Aligned_cols=102 Identities=17% Similarity=0.069 Sum_probs=72.1
Q ss_pred EEEe-CChhhHHHHHHhhhhcC-------CccchhHHHHHHHhc----CCC-eEEEEEecCCcEEEEEEEEEecCCCcee
Q 028270 3 CIRK-ATVDDLLAMQACNLFCL-------PENYQMKYYFYHILS----WPQ-LLYVAEDYNGRIVGYVLAKMEEESNECH 69 (211)
Q Consensus 3 ~ir~-~~~~D~~~l~~l~~~~~-------~~~~~~~~~~~~~~~----~~~-~~~v~~~~~g~ivG~~~~~~~~~~~~~~ 69 (211)
.++. ..++|++.+.++....+ ..+.... ++..+.. ... .++++.. +|++||+........ .
T Consensus 21 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~~~~~~~~~l~~~~~-~g~~va~~~~~~~~~----~ 94 (142)
T PF13480_consen 21 RFEVATDPADLEAFYELYRESWARRHGGFAPPFSRD-FFRDLLRSLAESGRLRLFVLYD-GGEPVAFALGFRHGG----T 94 (142)
T ss_pred EEEEeCCHHHHHHHHHHHHHHHhhhhCCCCCcchHH-HHHHHHHhhccCCCEEEEEEEE-CCEEEEEEEEEEECC----E
Confidence 3443 35778888777654332 2233333 3344332 223 3555665 899999998888776 6
Q ss_pred EEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEE
Q 028270 70 GHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHV 111 (211)
Q Consensus 70 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v 111 (211)
.+....+++|+|+..+.|..|+..+++++.+ .|++.+-+..
T Consensus 95 ~~~~~~g~~~~~~~~~~~~~l~~~~i~~a~~-~g~~~~d~g~ 135 (142)
T PF13480_consen 95 LYYWYGGYDPEYRKYSPGRLLLWEAIRWAIE-RGLRYFDFGG 135 (142)
T ss_pred EEEEEEEECHhhHhCCHHHHHHHHHHHHHHH-CCCCEEEECC
Confidence 7788888999999999999999999999999 7988776653
No 80
>PF06852 DUF1248: Protein of unknown function (DUF1248); InterPro: IPR009658 This entry represents a conserved region within a number of proteins of unknown function that seem to be specific to Caenorhabditis elegans. Note that some proteins in the entry contain more than one copy of this region.
Probab=97.75 E-value=0.0028 Score=47.36 Aligned_cols=121 Identities=8% Similarity=-0.006 Sum_probs=69.9
Q ss_pred CChhhHHHHHHhhhhcCCccchhHHH--HHHHhcCCCeEEEEEe-cCCcEEEEEEEEEecC----CCceeEEEEEEEEcC
Q 028270 7 ATVDDLLAMQACNLFCLPENYQMKYY--FYHILSWPQLLYVAED-YNGRIVGYVLAKMEEE----SNECHGHITSLAVLR 79 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~~~~~~~~~--~~~~~~~~~~~~v~~~-~~g~ivG~~~~~~~~~----~~~~~~~i~~l~V~p 79 (211)
...+-++++..+.... ...+....+ ....+....+++++.. ...++|+.+.+....+ ...+...++..+++|
T Consensus 10 P~~e~~d~fmk~~g~~-r~~Fk~~Di~~wk~sf~~~Y~l~~~~~KgT~~via~~~~~~~~~l~~~~d~pl~~~G~~w~~p 88 (181)
T PF06852_consen 10 PPQEYFDQFMKLHGNE-RWNFKRNDIKLWKESFDDDYWLVLTCLKGTDRVIATVHLIRFDPLNPSPDKPLQFIGFFWIDP 88 (181)
T ss_pred CCHHHHHHHHHHhcCC-cccccHHHHHHHHHhhccCeEEEEEEEcCCCcEEEEEEEEEeccCCCCCCCCeEEEeeeeeCC
Confidence 3445556666654331 122222222 2222333344444443 3467888887754332 123478899999999
Q ss_pred CccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 80 THRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 80 ~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+|||+|+++.+-+.+.+.++. .+-+ +.+ ..+..+.++|.+-+||...+.
T Consensus 89 ~yRg~~~~kl~~~~~~~~~~~-~~~N-~~~---~~~~~~~~~w~k~~G~~~~~h 137 (181)
T PF06852_consen 89 EYRGKGIMKLQDDICMDELDS-VDDN-SVA---QGNVKMSNFWHKMFGFDDYGH 137 (181)
T ss_pred cccCcchHHHHHHHHHHHhcc-CCCc-eee---ecCHHHHHHHHHHhCCCCCcc
Confidence 999999996444444444443 3333 333 245578899999789987775
No 81
>COG3053 CitC Citrate lyase synthetase [Energy production and conversion]
Probab=97.66 E-value=0.0013 Score=52.26 Aligned_cols=81 Identities=16% Similarity=0.128 Sum_probs=65.4
Q ss_pred EEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHH
Q 028270 43 LYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLY 122 (211)
Q Consensus 43 ~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y 122 (211)
+..+..++++||++..+.- .-|-.++|.+.+||-|++-+|+.++++.+.+ +|...+.+.+-+.+ .+++
T Consensus 38 ~v~~~~~~~~iiacGsiaG--------nvikcvAvs~s~qGeGl~lkl~TeLin~ay~-~g~~hLFiyTKp~~---~~lF 105 (352)
T COG3053 38 FVAIYRDNEEIIACGSIAG--------NVIKCVAVSESLQGEGLALKLVTELINLAYE-RGRTHLFIYTKPEY---AALF 105 (352)
T ss_pred EEEEEcCCCcEEEeccccc--------ceeEEEEechhcccccHHHHHHHHHHHHHHH-cCCceEEEEechhH---HHHH
Confidence 4444454689999865533 2467899999999999999999999999999 89988888877754 6799
Q ss_pred hhhcCceEeceeec
Q 028270 123 TETLGYKIHDVEAK 136 (211)
Q Consensus 123 ~k~~GF~~~~~~~~ 136 (211)
+. +||..+.....
T Consensus 106 k~-~GF~~i~~~~~ 118 (352)
T COG3053 106 KQ-CGFSEIASAEN 118 (352)
T ss_pred Hh-CCceEeeccCc
Confidence 99 99998875544
No 82
>COG3882 FkbH Predicted enzyme involved in methoxymalonyl-ACP biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.64 E-value=0.00026 Score=59.75 Aligned_cols=125 Identities=15% Similarity=0.180 Sum_probs=91.4
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHH----HHHHhcCCCeEEEEE-e----cCCcEEEEEEEEEecCCCceeEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYY----FYHILSWPQLLYVAE-D----YNGRIVGYVLAKMEEESNECHGHI 72 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~----~~~~~~~~~~~~v~~-~----~~g~ivG~~~~~~~~~~~~~~~~i 72 (211)
+++++...-+++.+.+|.+..-+-..+...+ +..+..++....+.. . -+.-+||++.+..... .+.|
T Consensus 414 l~vs~~de~~i~RIsQLtqkTNQFnlTtkRy~e~dV~~~~~~~~~li~sv~l~DKfgDnGiigvviv~kk~~----~w~I 489 (574)
T COG3882 414 LTVSKFDEVNIPRISQLTQKTNQFNLTTKRYNEEDVRQMQEDPNFLIFSVSLKDKFGDNGIIGVVIVEKKES----EWFI 489 (574)
T ss_pred EEEeeccccCcHHHHHHhhcccceeechhhhcHHHHHHHhhCCCeEEEEEEeccccccCceEEEEEEEecCC----eEEh
Confidence 6788899999999999988865443332222 223444444433322 2 2456999998888775 5666
Q ss_pred EEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEE--ecCcHHHHHHHhhhcCceEec
Q 028270 73 TSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHV--RKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 73 ~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v--~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
..+...-.--||++-++||..+.+.+.. .|...|...- ...|.+.-.||++ +||+..+
T Consensus 490 Dt~lmSCRVlgRkvE~~l~~~~~e~A~~-~gi~tir~~Y~pt~kN~pv~~FyE~-mgf~l~~ 549 (574)
T COG3882 490 DTFLMSCRVLGRKVEQRLMNSLEEQALS-EGINTIRGYYIPTEKNAPVSDFYER-MGFKLKG 549 (574)
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHh-cCcceeeeEecccccCCcHHHHHHH-hcccccc
Confidence 6666666667999999999999999998 8999887744 4568899999999 9999655
No 83
>PRK13834 putative autoinducer synthesis protein; Provisional
Probab=97.62 E-value=0.0025 Score=48.94 Aligned_cols=142 Identities=8% Similarity=-0.063 Sum_probs=90.0
Q ss_pred CChhhHHHHHHhhhhcCCc--cchhH---HHHHHHhcCCCeE-EEEEecCCcEEEEEEEEEecCCC--------------
Q 028270 7 ATVDDLLAMQACNLFCLPE--NYQMK---YYFYHILSWPQLL-YVAEDYNGRIVGYVLAKMEEESN-------------- 66 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~~--~~~~~---~~~~~~~~~~~~~-~v~~~~~g~ivG~~~~~~~~~~~-------------- 66 (211)
...+++.++.++-...|-+ .|... -.....+...... ++...++|+++|++.+.+...+.
T Consensus 13 ~~~~~l~~~~rLR~~VF~~elgW~~~~~~g~E~D~yD~~~~~yll~~~~~g~vvG~~RLlptt~p~ml~~~fp~l~~~~~ 92 (207)
T PRK13834 13 REASLLKQMHRLRARVFGGRLGWDVSITDGEERDQFDDLKPTYILAISDSGRVAGCARLLPAIGPTMLAQVFPQLLPAGR 92 (207)
T ss_pred cCHHHHHHHHHHHHHHhccccCCCCCCCCCcCccCCCCCCCEEEEEEeCCCeEEEEEecccCCCcchhhhhcHHhcCCCC
Confidence 3456677788887777743 23221 1122223333334 44454578999999887653321
Q ss_pred ----ceeEEEEEEEEcCCcccc---C----HHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 67 ----ECHGHITSLAVLRTHRKL---G----LATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 67 ----~~~~~i~~l~V~p~~rg~---G----ig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
...+++..++|+++++.. + +...|+..+.+++.. .|++.++..+.+ ...+++.+ +||.....-.
T Consensus 93 ~~~~~~v~E~SRf~V~~~~~~~~~~~~~~~~~~~L~~~~~~~a~~-~Gi~~~~~v~~~---~~~r~l~r-~G~~~~~lG~ 167 (207)
T PRK13834 93 LNAHPAMIESSRFCVDTALAEGRGGGQLHEATLTMFAGIIEWSMA-NGYTEIVTATDL---RFERILAR-AGWPMQRLGE 167 (207)
T ss_pred CCCCCCEEEEeeeEEcccccccccccccCHHHHHHHHHHHHHHHH-CCCCEEEEEECH---HHHHHHHH-cCCCeEECCC
Confidence 147889999999986422 2 567899999999999 899988877766 67789999 9987654333
Q ss_pred ccccCCcceeeeeecccC
Q 028270 136 KYYADGEDAYDMRKQLKG 153 (211)
Q Consensus 136 ~~~~~~~d~~~m~k~l~~ 153 (211)
..-.++...+.....+++
T Consensus 168 ~~~~g~~~~~a~~i~v~~ 185 (207)
T PRK13834 168 PKAIGNTMAVAGILPADR 185 (207)
T ss_pred CEEECCeEEEEEEEECCH
Confidence 322233444444444443
No 84
>COG3916 LasI N-acyl-L-homoserine lactone synthetase [Signal transduction mechanisms / Secondary metabolites biosynthesis, transport, and catabolism]
Probab=97.43 E-value=0.0081 Score=45.51 Aligned_cols=145 Identities=13% Similarity=0.100 Sum_probs=96.6
Q ss_pred eCChhhHHHHHHhhhhcCCc--cchh---HHHHHHHhcCCCeEEEEE-ecCCcEEEEEEEEEecCCCc------------
Q 028270 6 KATVDDLLAMQACNLFCLPE--NYQM---KYYFYHILSWPQLLYVAE-DYNGRIVGYVLAKMEEESNE------------ 67 (211)
Q Consensus 6 ~~~~~D~~~l~~l~~~~~~~--~~~~---~~~~~~~~~~~~~~~v~~-~~~g~ivG~~~~~~~~~~~~------------ 67 (211)
...+.-++++..+..+.|.+ .|.. .-+....+.+.+..|++. ..+|+|+|++.+.+...+.-
T Consensus 11 ~~~~~~l~em~rlR~~vF~erL~W~v~~~~g~E~DqyD~~~t~Yll~~~~~g~I~G~~RlLptt~P~mL~~vF~~Ll~~~ 90 (209)
T COG3916 11 ELFPKALEEMHRLRYQVFKERLGWDVVCIDGFEIDQYDNLDTVYLLALTSDGRIVGCVRLLPTTGPYMLTDVFPALLEGG 90 (209)
T ss_pred hhcHHHHHHHHHHHHHHHHHhcCCceeccCCccccccCCCCceEEEEEcCCCcEEEEEEeccCCCcchhhhhhHHHhcCC
Confidence 34566677788887777743 3321 113333344455555544 66899999999877644320
Q ss_pred ------eeEEEEEEEEcC--Ccccc---C-HHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 68 ------CHGHITSLAVLR--THRKL---G-LATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 68 ------~~~~i~~l~V~p--~~rg~---G-ig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
..++...++|+. .-+.. . ++..|+.-+++++.+ .|++.|...+.. .+.++.++ .||.....-.
T Consensus 91 ~~P~~p~vwEsSRF~vd~~~a~~~~g~~~~a~~el~~g~ie~a~~-~G~~~IvtVt~~---~meril~r-~Gw~~~riG~ 165 (209)
T COG3916 91 PPPSSPGVWESSRFAVDKPSARRAAGGVSPAAYELFAGMIEYALA-RGITGIVTVTDT---GMERILRR-AGWPLTRIGP 165 (209)
T ss_pred CCCCCCCeEEEeeeeeccccchhhcCCccHHHHHHHHHHHHHHHH-cCCceEEEEEch---HHHHHHHH-cCCCeEEcCC
Confidence 256677888886 33322 2 378899999999999 899999988776 78899999 9998776444
Q ss_pred ccccCCcceeeeeecccCCC
Q 028270 136 KYYADGEDAYDMRKQLKGKQ 155 (211)
Q Consensus 136 ~~~~~~~d~~~m~k~l~~~~ 155 (211)
..-..++..+....+++...
T Consensus 166 ~~~ig~~~~VA~~l~i~~~s 185 (209)
T COG3916 166 PLTIGNERAVALLLDIDRES 185 (209)
T ss_pred ceeeCCeeEEEEEeecCHHH
Confidence 33333456676666666544
No 85
>KOG3698 consensus Hyaluronoglucosaminidase [Posttranslational modification, protein turnover, chaperones]
Probab=97.36 E-value=0.0011 Score=57.11 Aligned_cols=142 Identities=15% Similarity=0.087 Sum_probs=99.9
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCc-----cch-h-----HHHHHHHh-cCCCeEEEEEecCCcEEEEEEEEEecCCCc--
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPE-----NYQ-M-----KYYFYHIL-SWPQLLYVAEDYNGRIVGYVLAKMEEESNE-- 67 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~-----~~~-~-----~~~~~~~~-~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~-- 67 (211)
+.|||.+..|-..+..+....+.+ ++. . ..++-.++ ..+..|+++.+++++||||+..........
T Consensus 680 y~iRPy~~~De~~v~~~ct~my~d~g~~lpf~n~pn~~~d~liggllsls~~lC~v~~de~~~i~gYa~a~~Dvt~F~rn 759 (891)
T KOG3698|consen 680 YDIRPYTIADEEYVSGMCTVMYTDNGELLPFRNAPNFADDNLIGGLLSLSEHLCEVVDDEGHKIVGYASAHFDVTLFSRN 759 (891)
T ss_pred EeeccCccccHHHHHhhhhheeccCceeccCCCCCccccccchhheeccChhheeeeecCCCceeEEeeeecccchhhhc
Confidence 579999999999999887776532 111 1 11122222 234578899887889999998765532210
Q ss_pred -------------------------------------------------------eeEEEEEEEEcCCccccCHHHHHHH
Q 028270 68 -------------------------------------------------------CHGHITSLAVLRTHRKLGLATKLMN 92 (211)
Q Consensus 68 -------------------------------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~ 92 (211)
....+....++.+.-.-|+.+++|+
T Consensus 760 ~~i~w~~~l~EKY~~~i~p~~~g~~~~~~~e~i~~S~h~~~~~~~~~~~P~~~~~nfPa~v~~~~~~~a~D~~~~k~m~~ 839 (891)
T KOG3698|consen 760 FLITWKEKLKEKYRGLIEPIGSGKLTDEYIEFIQNSQHPMDIEEWYPKIPDQIFENFPAWVETYFGMDASDAHPMKKMIQ 839 (891)
T ss_pred eeeeeHHHHHHHhhccccccCCchhHHHHHHHHHHccCccchhhccccCcHHHHhcChHHHhhccccccccchHHHHHHH
Confidence 0000223445556667899999999
Q ss_pred HHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeec
Q 028270 93 AAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQ 150 (211)
Q Consensus 93 ~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~ 150 (211)
.++-.++. .|...-.+.|..++.+-++||.+ +||..++...++ +.++|.|.
T Consensus 840 vll~tL~a-NGsrGaf~~V~~dD~~~~~fys~-lG~~d~~~~e~~-----~~~i~Gr~ 890 (891)
T KOG3698|consen 840 VLLVTLAA-NGSRGAFLTVAIDDIERQKFYSE-LGLTDLGLSECQ-----RFRIFGRT 890 (891)
T ss_pred HHHHHHHh-cCCcceeEEechhHHHHHHHHHH-hchHHHhHhhcc-----eEEEeccc
Confidence 99999998 79999999999999999999999 999988865442 55666554
No 86
>TIGR03694 exosort_acyl putative PEP-CTERM/exosortase system-associated acyltransferase. Members of this protein family are restricted to bacterial species with the PEP-CTERM/exosortase system predicted to act in exopolysaccharide-associated protein targeting. PSI-BLAST and CDD reveal relationships to the acyltransferase family that includes N-acyl-L-homoserine lactone synthetase. Several members of this family may be found in a single genome. These proteins likely contribute to chemical modifications in exopolysaccharide and biofilm structural material production.
Probab=97.27 E-value=0.0066 Score=47.79 Aligned_cols=125 Identities=14% Similarity=0.079 Sum_probs=83.1
Q ss_pred EEEeC-ChhhHHHHHHhhhhcCCc--cchh-----HHHHHHHhcCCCeEEEEEe-cCCcEEEEEEEEEecC---------
Q 028270 3 CIRKA-TVDDLLAMQACNLFCLPE--NYQM-----KYYFYHILSWPQLLYVAED-YNGRIVGYVLAKMEEE--------- 64 (211)
Q Consensus 3 ~ir~~-~~~D~~~l~~l~~~~~~~--~~~~-----~~~~~~~~~~~~~~~v~~~-~~g~ivG~~~~~~~~~--------- 64 (211)
.++.+ +..++.++..+...+|-+ .|.. .......+......+++.+ ++|++||++.+.+...
T Consensus 9 ~v~~a~~~~~~~~~~~lR~~VFv~e~gw~~~~~~~~~~E~D~~D~~~~h~l~~~~~~g~vvG~~RLl~t~~~~p~~~~p~ 88 (241)
T TIGR03694 9 EIIPAVTPELLEEAFRLRYQVYCEELGFEPPSDYPDGLETDEYDAHSVHSLLRHRRTGTFVGCVRLVLPNSSDPDQPFPF 88 (241)
T ss_pred EEEEcCCHHHHHHHHHHHHHHHHHhcCCCCCCCCCCCCcCCCCCCCCcEEEEEECCCCCEEEEEEEeccccccccccccH
Confidence 34444 355677888887777632 2321 1111122223344455543 3589999999886410
Q ss_pred ------------------CCceeEEEEEEEEcCCcccc--------C--------------------HHHHHHHHHHHHH
Q 028270 65 ------------------SNECHGHITSLAVLRTHRKL--------G--------------------LATKLMNAAQSAM 98 (211)
Q Consensus 65 ------------------~~~~~~~i~~l~V~p~~rg~--------G--------------------ig~~Ll~~~~~~~ 98 (211)
.....+++..++|+++||++ | +...|+..+.+++
T Consensus 89 e~~~~~~~~~~~~~~~~~~~~~i~E~SRf~V~~~~r~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~~~~~~a 168 (241)
T TIGR03694 89 EKHCSHSLDGLFLDPRRLPRSRIAEVSRLAVSKDFRRRKGEKLKPSGVGVIETEAPFSESERRRFPHIPLGLYLGLIALS 168 (241)
T ss_pred HHHhccccchhhcCccccCCCceEEeehheECHhHhCCcccccccccccccccccccchhhcccCchHHHHHHHHHHHHH
Confidence 00136788999999999974 2 5677999999999
Q ss_pred HHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 99 EQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 99 ~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.+ .|++.++..+.+ ...+++.+ +|+....
T Consensus 169 ~~-~Gi~~~~~v~~~---~l~r~l~r-~G~~~~~ 197 (241)
T TIGR03694 169 SA-NGITHWYAIMEP---RLARLLSR-FGIQFRQ 197 (241)
T ss_pred HH-CCCcEEEEEeCH---HHHHHHHH-hCCceEE
Confidence 99 899988887776 67789999 9987554
No 87
>TIGR03245 arg_AOST_alph arginine/ornithine succinyltransferase, alpha subunit. In some bacteria, including Pseudomonas aeruginosa, the astB gene (arginine N-succinyltransferase) is replaced by tandem paralogs that form a heterodimer. This heterodimer from P. aeruginosa is characterized as arginine and ornithine N-2 succinyltransferase (AOST). Members of this protein family represent the less widespread paralog, designated AruI, or arginine/ornithine succinyltransferase, alpha subunit.
Probab=97.26 E-value=0.0024 Score=52.08 Aligned_cols=94 Identities=21% Similarity=0.196 Sum_probs=61.8
Q ss_pred EEEeCChhhHHHHHHhhhhc------CCccc---------hhHHHHHHHh--cCCCeEEEEEe-cCCcEEEEEEEEEecC
Q 028270 3 CIRKATVDDLLAMQACNLFC------LPENY---------QMKYYFYHIL--SWPQLLYVAED-YNGRIVGYVLAKMEEE 64 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~------~~~~~---------~~~~~~~~~~--~~~~~~~v~~~-~~g~ivG~~~~~~~~~ 64 (211)
.|||++..|+++|.+|.... +|.+. +...|..... .+...+||+++ +.|+|||++.+.....
T Consensus 1 viRpv~~~Dl~aL~~LA~~sG~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG 80 (336)
T TIGR03245 1 IVRPSRFADLPAIERLANESAIGVTSLPADRAKLGEKIAQSERSFAAEVSFVGEERYLFVLEDTETGKLLGTSSIVASAG 80 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHHhhcCCCCCccEEEEEEeCCCCcEEEEEeEEeccc
Confidence 38999999999999997664 23221 1111211111 12345677776 4589999998876533
Q ss_pred CCc---------------------------------eeEEEEEEEEcCCccccCHHHHHHHHHHH
Q 028270 65 SNE---------------------------------CHGHITSLAVLRTHRKLGLATKLMNAAQS 96 (211)
Q Consensus 65 ~~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 96 (211)
... ....|..+.++|+||+-|.|+.|-..=+-
T Consensus 81 ~~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~lLSr~RfL 145 (336)
T TIGR03245 81 YGEPFYSYRNDTLIHASRELKVNNKIHVLYMCHELTGSSLLCSFYVDPRLRKTEAAELLSRARLL 145 (336)
T ss_pred CCCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhHHHHHHHH
Confidence 321 24569999999999999998877654433
No 88
>TIGR03244 arg_catab_AstA arginine N-succinyltransferase. In many bacteria, the arginine succinyltransferase (ast) pathway operon consists of five genes, including this protein, arginine N-succinyltransferase (EC 2.3.1.109). In a few species, such as Pseudomonas aeruginosa, the member of this family is encoded adjacent to a paralog, and the two polypeptides form a heterodimeric enzyme, active on both arginine and ornithine. In such species, this polypeptide may be treated as the beta subunit of an enzyme that may be named either arginine N-succinyltransferase (AST) or arginine and orthithine N-succinyltransferase (AOST).
Probab=97.26 E-value=0.0024 Score=52.15 Aligned_cols=92 Identities=21% Similarity=0.157 Sum_probs=60.1
Q ss_pred EEEeCChhhHHHHHHhhhhcC------Cccc---------hhHHHHHHHh-cCCCeEEEEEe-cCCcEEEEEEEEEecCC
Q 028270 3 CIRKATVDDLLAMQACNLFCL------PENY---------QMKYYFYHIL-SWPQLLYVAED-YNGRIVGYVLAKMEEES 65 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~~------~~~~---------~~~~~~~~~~-~~~~~~~v~~~-~~g~ivG~~~~~~~~~~ 65 (211)
.|||++..|+++|.+|....= |.+. +...|....- .+...+||+++ +.|+|||++.+.-....
T Consensus 1 vvRPv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLEDt~tg~vvGts~I~a~vG~ 80 (336)
T TIGR03244 1 IVRPVETSDLDALYQLAQSTGIGLTSLPANEDLLSARIERAEKTFSGELTRAEQGYLFVLEDTETGTVAGVSAIEAAVGL 80 (336)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHhcCcCCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 389999999999999976642 2221 1111100000 12345677766 45899999988755333
Q ss_pred Cc---------------------------------eeEEEEEEEEcCCccccCHHHHHHHHH
Q 028270 66 NE---------------------------------CHGHITSLAVLRTHRKLGLATKLMNAA 94 (211)
Q Consensus 66 ~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~ 94 (211)
.. ....|..+.++|+||+-|.|+.|-..=
T Consensus 81 ~~PfY~yr~~~~vhaS~~L~v~~~~~~L~l~nd~tG~SElctLfL~p~~R~~~~G~LLSr~R 142 (336)
T TIGR03244 81 EEPFYNYRVGTVVHASKELGIYKALETLFLSNDLTGYSELCTLFLDPDYRKGGNGRLLSKSR 142 (336)
T ss_pred CCCCEEEEcCceeecCcccCCceeeeeEEeeccCCCCeeeEEEEECHHHcCCcchhhHHHHH
Confidence 21 245699999999999999988775543
No 89
>TIGR03243 arg_catab_AOST arginine and ornithine succinyltransferase subunits. In many bacteria, the sole member of this protein family is arginine N-succinyltransferase (EC 2.3.1.109), the AstA protein of the arginine succinyltransferase (ast) pathway. However, in Pseudomonas aeruginosa and several other species, a tandem gene pair encodes alpha and beta subunits of a heterodimer that is designated arginine and ornithine succinyltransferase (AOST).
Probab=97.19 E-value=0.0017 Score=52.92 Aligned_cols=94 Identities=20% Similarity=0.156 Sum_probs=62.1
Q ss_pred EEEeCChhhHHHHHHhhhhc------CCccc---------hhHHHHHHHh-cCCCeEEEEEe-cCCcEEEEEEEEEecCC
Q 028270 3 CIRKATVDDLLAMQACNLFC------LPENY---------QMKYYFYHIL-SWPQLLYVAED-YNGRIVGYVLAKMEEES 65 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~l~~~~------~~~~~---------~~~~~~~~~~-~~~~~~~v~~~-~~g~ivG~~~~~~~~~~ 65 (211)
.|||++..|+++|.+|.... +|.+. +...|..... .+...+||+++ +.|+|+|++.+......
T Consensus 1 vvRpv~~~Dl~aL~~LA~~sg~G~TsLP~d~~~L~~rI~~S~~sF~~~~~~~~~~YlFVLED~~tg~vvGts~I~a~vG~ 80 (335)
T TIGR03243 1 IVRPVRTSDLDALMQLARESGIGLTSLPADRAALGSRIARSEKSFAGESTRGEEGYLFVLEDTETGTVAGVSAIEAAVGL 80 (335)
T ss_pred CcccCccccHHHHHHHHHHcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEeCCCCeEEEEEeEEecccC
Confidence 38999999999999997664 23221 1222211111 12345677776 45899999988765333
Q ss_pred Cc---------------------------------eeEEEEEEEEcCCccccCHHHHHHHHHHH
Q 028270 66 NE---------------------------------CHGHITSLAVLRTHRKLGLATKLMNAAQS 96 (211)
Q Consensus 66 ~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~ 96 (211)
.. ....|..+.++|+||+-|.|+.|-..=+-
T Consensus 81 ~~PfY~yrv~~~vhaS~~L~v~~~~~~L~l~nd~tG~sElctLfL~p~~R~~~~G~LLSr~RfL 144 (335)
T TIGR03243 81 DEPFYNYRVGTLVHASRELGVYNKIPTLTLSNDLTGSSELCTLFLDPDYRKGGNGRLLSRSRFL 144 (335)
T ss_pred CCCCEEEEcCceeecCcccCCccceeeEEeeccCCCCeeeEEEEECHHHcCCCchhhHHHHHHH
Confidence 21 24569999999999999999877654443
No 90
>PF01233 NMT: Myristoyl-CoA:protein N-myristoyltransferase, N-terminal domain; InterPro: IPR022676 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the N-terminal region. ; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 4A33_A 3H5Z_A 4A2Z_A 2WSA_A ....
Probab=97.11 E-value=0.023 Score=41.37 Aligned_cols=94 Identities=16% Similarity=0.111 Sum_probs=62.3
Q ss_pred hhhHHHHHHhhhhcCC-c-------cchhHHHHHHHhcCCCe----EEEEEe-cCCcEEEEEEEEEecCC----CceeEE
Q 028270 9 VDDLLAMQACNLFCLP-E-------NYQMKYYFYHILSWPQL----LYVAED-YNGRIVGYVLAKMEEES----NECHGH 71 (211)
Q Consensus 9 ~~D~~~l~~l~~~~~~-~-------~~~~~~~~~~~~~~~~~----~~v~~~-~~g~ivG~~~~~~~~~~----~~~~~~ 71 (211)
++++.++.+|....+- + .|+.+. +...+..|++ ...+.. ..+++|||+...+..-. ..+..+
T Consensus 34 ~~~l~ely~lL~~nYVEDdd~~fRf~YS~ef-L~WaL~pPg~~~~whiGVR~~~~~kLvgfIsaip~~irv~~~~~~~~e 112 (162)
T PF01233_consen 34 DEELKELYELLNENYVEDDDNMFRFDYSKEF-LKWALKPPGWKKEWHIGVRVKSSKKLVGFISAIPATIRVRDKVIKMVE 112 (162)
T ss_dssp HHHHHHHHHHHHHHSSBTTTSSEEE---HHH-HHHHHTSTT--GGGEEEEEETTTTEEEEEEEEEEEEEEETTEEEEEEE
T ss_pred HHHHHHHHHHHHhcCccCCcceEEeeCCHHH-HhheeeCcCCccceEEEEEECCCCEEEEEEccceEEEEEeeeEeeeee
Confidence 4566677777666552 2 234444 4444455543 444443 47899999988765322 124788
Q ss_pred EEEEEEcCCccccCHHHHHHHHHHHHHHHhcCC
Q 028270 72 ITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGA 104 (211)
Q Consensus 72 i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~ 104 (211)
|..++|++.+|+++++-.|+.++.+++.. .|+
T Consensus 113 INFLCVhKklRskrlAPvLIkEItRRvn~-~gI 144 (162)
T PF01233_consen 113 INFLCVHKKLRSKRLAPVLIKEITRRVNL-QGI 144 (162)
T ss_dssp EEEEEE-GGGTTSSHHHHHHHHHHHHHHT-TT-
T ss_pred EEEEeecHhHhhcCCcHHHHHHHHHHhhh-cCc
Confidence 99999999999999999999999999977 564
No 91
>TIGR03019 pepcterm_femAB FemAB-related protein, PEP-CTERM system-associated. Members of this protein family are found always as part of extended exopolysaccharide biosynthesis loci in bacteria. In nearly every case, these loci contain determinants for the processing of the PEP-CTERM proposed C-terminal protein sorting signal. This family shows remote, local sequence similarity to the FemAB protein family (see pfam02388), whose members
Probab=96.96 E-value=0.017 Score=47.58 Aligned_cols=122 Identities=12% Similarity=0.089 Sum_probs=81.6
Q ss_pred hhHHHHHHhhhhcC---C-ccchhHHHHHHHh---cCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCcc
Q 028270 10 DDLLAMQACNLFCL---P-ENYQMKYYFYHIL---SWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHR 82 (211)
Q Consensus 10 ~D~~~l~~l~~~~~---~-~~~~~~~~~~~~~---~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r 82 (211)
+|++...++....+ . ..++.. +++.+. .....++++...+|++||.+.+..... ..+....+..++++
T Consensus 158 ~~l~~F~~l~~~t~~r~g~p~~~~~-~f~~l~~~~~~~~~l~~a~~~~g~~va~~l~~~~~~----~~~~~~~g~~~~~~ 232 (330)
T TIGR03019 158 GDLDRFYDVYAENMRDLGTPVFSRR-YFRLLKDVFGEDCEVLTVRLGDGVVASAVLSFYFRD----EVLPYYAGGLREAR 232 (330)
T ss_pred CcHHHHHHHHHHHHhcCCCCCCCHH-HHHHHHHhcccCEEEEEEEeCCCCEEEEEEEEEeCC----EEEEEeccChHHHH
Confidence 45666666654432 1 123333 333332 233345566634888988877666544 33333556789999
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccc
Q 028270 83 KLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYY 138 (211)
Q Consensus 83 g~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~ 138 (211)
+.+-+..|+-++++++.+ .|++..-+.....+....+|-++ +||+++....+|+
T Consensus 233 ~~~~~~lL~w~~i~~a~~-~G~~~fDfG~s~~~~G~~~FK~~-~G~~~~~l~~~~~ 286 (330)
T TIGR03019 233 DVAANDLMYWELMRRACE-RGLRVFDFGRSKRGTGPFKFKKN-WGFEPQPLHYEYL 286 (330)
T ss_pred hhChHHHHHHHHHHHHHH-CCCcEEEcCCCCCCCccHHHHhc-CCCeeccceEEEE
Confidence 999999999999999999 89998888765555566677777 9999888666544
No 92
>PF05301 Mec-17: Touch receptor neuron protein Mec-17; InterPro: IPR007965 Mec-17 is the protein product of one of the 18 genes required for the development and function of the touch receptor neuron for gentle touch. Mec-17 is specifically required for maintaining the differentiation of the touch receptor []. This family is conserved to higher eukaryotes.; GO: 0019799 tubulin N-acetyltransferase activity
Probab=96.92 E-value=0.023 Score=39.20 Aligned_cols=81 Identities=14% Similarity=0.288 Sum_probs=53.3
Q ss_pred CCeEEEEEec----CCcEEEEEEEE-----EecCCCc-----eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCc
Q 028270 40 PQLLYVAEDY----NGRIVGYVLAK-----MEEESNE-----CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAE 105 (211)
Q Consensus 40 ~~~~~v~~~~----~g~ivG~~~~~-----~~~~~~~-----~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~ 105 (211)
...+|+..+. .+.++|+.-+- ..+.... +...|..++|++..|++|+|++|++.+++. .+..
T Consensus 3 ~~~~Yll~d~~~~~~g~viG~LKVG~K~Lfl~d~~g~~~e~~~~~cvLDFyVhes~QR~G~Gk~LF~~ML~~----e~~~ 78 (120)
T PF05301_consen 3 DQVLYLLKDSEAGGKGAVIGFLKVGYKKLFLLDERGQHREIEPLLCVLDFYVHESRQRRGYGKRLFDHMLQE----ENVS 78 (120)
T ss_pred ceEEEEEEecCCCCCceEEEEEEEeeeeEEEEcCCCCEEEecccceeeeEEEEeceeccCchHHHHHHHHHH----cCCC
Confidence 3456666652 25688886332 1122211 123667889999999999999999998885 3444
Q ss_pred EEEEEEecCcHHHHHHHhh
Q 028270 106 YVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 106 ~i~l~v~~~N~~a~~~Y~k 124 (211)
-..+.++.-.....+|.+|
T Consensus 79 p~~~a~DrPS~Kll~Fl~K 97 (120)
T PF05301_consen 79 PHQLAIDRPSPKLLSFLKK 97 (120)
T ss_pred cccceecCCcHHHHHHHHH
Confidence 4455566666677888887
No 93
>PF13880 Acetyltransf_13: ESCO1/2 acetyl-transferase
Probab=96.92 E-value=0.0011 Score=41.40 Aligned_cols=30 Identities=33% Similarity=0.513 Sum_probs=26.9
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHH
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAM 98 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~ 98 (211)
..-|..|+|+|.+|++||+++||+.+....
T Consensus 5 ~~GI~RIWV~~~~RR~GIAt~Lld~ar~~~ 34 (70)
T PF13880_consen 5 VCGISRIWVSPSHRRKGIATRLLDAARENF 34 (70)
T ss_pred EEEeEEEEeChhhhhhhHHHHHHHHHHHhc
Confidence 456889999999999999999999998864
No 94
>PRK14852 hypothetical protein; Provisional
Probab=96.83 E-value=0.015 Score=53.93 Aligned_cols=146 Identities=14% Similarity=0.088 Sum_probs=99.5
Q ss_pred EEEeC-ChhhHHHHHHhhhhcC-----CccchhHHHHHHHhcCCC-eEEEEEecCCcEEEEEEEEEecCC-C--------
Q 028270 3 CIRKA-TVDDLLAMQACNLFCL-----PENYQMKYYFYHILSWPQ-LLYVAEDYNGRIVGYVLAKMEEES-N-------- 66 (211)
Q Consensus 3 ~ir~~-~~~D~~~l~~l~~~~~-----~~~~~~~~~~~~~~~~~~-~~~v~~~~~g~ivG~~~~~~~~~~-~-------- 66 (211)
.||.+ +.+|...+..|....+ ..+-+.......+...+. ..|++.. .+.++|...+..+... +
T Consensus 30 ~~r~Aet~~e~~~~~~L~~~~Y~~~Gy~~~~ps~~~~~~~~~lp~t~~~i~k~-~~~~l~T~t~~~ds~~~Gl~~D~lf~ 108 (989)
T PRK14852 30 AIKIAETPDEYTRAFRLVYEEYIRSGYLKPHPSRMYYNVWSILPATSVFIFKS-YHDVLCTLTHIPDSGLFGLPMDTLYK 108 (989)
T ss_pred ceeecCCHHHHHHHHHHHHHHHHHcCCCCcCcccccCCccccCCcceEEEecc-CCcEEEEEEEecCCcccCcCHHHHHH
Confidence 35665 4777777777766544 122222222222222333 3466666 4677777777766542 2
Q ss_pred ----------ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 67 ----------ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 67 ----------~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
.+.+.+..++++++.|..-+--.+++.+.+++.. .+++.+.+.|.+.+ +.||++-+||+..+..+.
T Consensus 109 ~eLd~lr~~Gr~v~EvtrLa~d~~~~~~~l~~~l~~~~~~y~~~-~~~dd~~i~VnPkH---~~FY~r~l~f~~ig~~r~ 184 (989)
T PRK14852 109 PEVDALRAQGRNVVEVGALATQYSRRWTNLMVFLAKAMFQYSMM-SEVDDILVTVNPKH---VKFYTDIFLFKPFGEVRH 184 (989)
T ss_pred HHHHHHHHcCCeEEeeehheechhhcccchhHHHHHHHHHHHHH-cCCCeEEEEECcch---HHHHHHHhCCcccccccc
Confidence 1577889999988888777777888888888877 79999999999866 569998689999998777
Q ss_pred cccCCcceeeeeecccC
Q 028270 137 YYADGEDAYDMRKQLKG 153 (211)
Q Consensus 137 ~~~~~~d~~~m~k~l~~ 153 (211)
|-.-+..++.|..++..
T Consensus 185 ~p~VnaPAvll~~dl~~ 201 (989)
T PRK14852 185 YDTVDAPAVALRIDLHE 201 (989)
T ss_pred CCCCCcchhheecCHHH
Confidence 64445667777777743
No 95
>PHA01733 hypothetical protein
Probab=96.79 E-value=0.0053 Score=44.18 Aligned_cols=122 Identities=16% Similarity=0.062 Sum_probs=70.4
Q ss_pred EEEeCChhhHHHHHH-hhh------hcCCccchhHHHHHHHhcCC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEE
Q 028270 3 CIRKATVDDLLAMQA-CNL------FCLPENYQMKYYFYHILSWP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITS 74 (211)
Q Consensus 3 ~ir~~~~~D~~~l~~-l~~------~~~~~~~~~~~~~~~~~~~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~ 74 (211)
.|||+|.+|+..+.. +.. .+... ... ++....... ...+.+.- +|.++|++......... .+.+-.
T Consensus 4 ~IrpaT~~d~~~l~~n~r~~Dr~E~ealg~--~p~-~l~~~~~~s~~~v~~~~~-nG~l~aI~Gv~~d~~~~--vG~pWl 77 (153)
T PHA01733 4 NNRPATQADATEVAQNLRQEDREEIEGLGH--SPL-ALHLSLDVSENVVAFVAP-DGSLAGVAGLVEDMGNR--VGEIWM 77 (153)
T ss_pred ccccccHHHHHHHHccCCHHHHHHHHHhCC--Ccc-cchhhhhccccceEEEec-CCcEEEEecccccccCC--CCceeE
Confidence 489999999876654 211 12221 111 222222223 33355554 89999998887632222 222223
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+++..=.+ +-..++..+..++.+...++.++-.|+..|..+++|.+. +||+.....
T Consensus 78 V~T~~v~k---~~~~f~re~r~~l~e~~~Yp~LwNyV~~~N~~hir~Lk~-lGF~f~~~~ 133 (153)
T PHA01733 78 VCTPAIEK---NPIALLRGAKWWLPKSRNYDLLWNIVDKRNLVHRKLLRK-LGFKGLRYV 133 (153)
T ss_pred EecHHhHh---CCHHHHHHHHHHHHHhccccHHHHhHhcccHHHHHHHHH-cCceeeccc
Confidence 33322111 233445555544443356778888999999999999999 999988743
No 96
>COG3138 AstA Arginine/ornithine N-succinyltransferase beta subunit [Amino acid transport and metabolism]
Probab=96.76 E-value=0.0038 Score=49.33 Aligned_cols=90 Identities=23% Similarity=0.256 Sum_probs=58.4
Q ss_pred CeEEEeCChhhHHHHHHhhhhc------CCccch---------hHHHHHHHhc-CCCeEEEEEe-cCCcEEEEEEEEEec
Q 028270 1 MVCIRKATVDDLLAMQACNLFC------LPENYQ---------MKYYFYHILS-WPQLLYVAED-YNGRIVGYVLAKMEE 63 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~------~~~~~~---------~~~~~~~~~~-~~~~~~v~~~-~~g~ivG~~~~~~~~ 63 (211)
|+.+||++..|++++.+|.... .|.+.. ...|.....+ ....++++.+ +.|+++|++.+.-.-
T Consensus 1 mlvvRP~~~aDl~al~~LA~~sg~G~TsLP~de~~L~~Ri~~se~sf~~~~~~ge~~Y~fVLEDsetG~VvG~saI~a~v 80 (336)
T COG3138 1 MLVVRPVERADLEALMELAVKTGVGLTSLPADEATLRARIERSEKSFQGELPPGEAGYLFVLEDSETGTVVGISAIEAAV 80 (336)
T ss_pred CcccccccccCHHHHHHHHHhcCCCcccCCCCHHHHHHHHHHHHHHHhcccCCCCccEEEEEEecCCceEEeEEEEEEee
Confidence 8999999999999999997663 233221 1112111111 1234566665 569999998876543
Q ss_pred CCCc---------------------------------eeEEEEEEEEcCCccccCHHHHH
Q 028270 64 ESNE---------------------------------CHGHITSLAVLRTHRKLGLATKL 90 (211)
Q Consensus 64 ~~~~---------------------------------~~~~i~~l~V~p~~rg~Gig~~L 90 (211)
..+. ....+..++++|+||.-|.|+.|
T Consensus 81 Gl~~PfYsyRv~tlvhaS~~L~v~~~i~~L~L~Nd~TG~SEl~sLFl~pd~Rkg~nG~Ll 140 (336)
T COG3138 81 GLNDPFYSYRVGTLVHASPELNVYNEIPTLFLSNDLTGNSELCTLFLDPDWRKGGNGRLL 140 (336)
T ss_pred ccCCccceeeeeeeeecCccccccccceeEEEeccCcCchhhhheeecHHHhcccchhhh
Confidence 3321 23458899999999987777654
No 97
>TIGR03827 GNAT_ablB putative beta-lysine N-acetyltransferase. Members of this protein family are GNAT family acetyltransferases, based on a seed alignment in which every member is associated with a lysine 2,3-aminomutase family protein, usually as the adjacent gene. This family includes AblB, the enzyme beta-lysine acetyltransferase that completes the two-step synthesis of the osmolyte (compatible solute) N-epsilon-acetyl-beta-lysine; all members of the family may have this function. Note that N-epsilon-acetyl-beta-lysine has been observed only in methanogenic archaea (e.g. Methanosarcina) but that this model, paired with TIGR03820, suggests a much broader distribution.
Probab=96.71 E-value=0.0072 Score=48.26 Aligned_cols=66 Identities=23% Similarity=0.269 Sum_probs=57.6
Q ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecccCCCC
Q 028270 85 GLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKGKQS 156 (211)
Q Consensus 85 Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l~~~~~ 156 (211)
|-...|+..+.+.+.+ .|+.+|++.|...+ ..++++ .||...++.+.||.. +|+++|.+.+++...
T Consensus 21 ~~~~~~~~~~~~~a~~-~~~~ki~~~~~~~~---~~~~~~-~g~~~e~~i~~~f~g-~~~~~~~~~~~~~r~ 86 (266)
T TIGR03827 21 NDVEALIPDLDALAKK-EGYTKIIAKVPGSD---KPLFEE-RGYLEEAKIPGYFNG-HDAYFMSKYLDEDRR 86 (266)
T ss_pred ccHHHHHHHHHHHHHH-cCCcEEEEEccHHH---HHHHHH-CCCeEEEecccccCC-CceEEEEEcCchHhC
Confidence 4577899999999999 89999999998855 679999 999999999999854 899999999987543
No 98
>PF09390 DUF1999: Protein of unknown function (DUF1999); InterPro: IPR018987 This family contains a putative Fe-S binding reductase (Q72J89 from SWISSPROT) whose structure adopts an alpha and beta fold. ; PDB: 2D4O_A 2D4P_A.
Probab=96.69 E-value=0.13 Score=36.65 Aligned_cols=125 Identities=21% Similarity=0.227 Sum_probs=70.4
Q ss_pred eEEEeCChhhHHHHHHhhhhc----------CCcc-----chhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCC
Q 028270 2 VCIRKATVDDLLAMQACNLFC----------LPEN-----YQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESN 66 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~----------~~~~-----~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~ 66 (211)
|.+|+.++.|.+.+..+.... +|+- .+..--.-.++...++.|++.++.+.+.||+..-......
T Consensus 1 M~yR~f~e~D~~aL~ald~a~qr~~dP~fd~lperer~gr~~tSl~Alrfy~RsgHSFvA~~e~~~~~GfvLAQaVWQGd 80 (161)
T PF09390_consen 1 MRYRPFTEPDFAALQALDLAAQRRTDPAFDGLPEREREGRLSTSLAALRFYERSGHSFVAEDEGGELQGFVLAQAVWQGD 80 (161)
T ss_dssp -EEE---GGGHHHHHHC--------------------STTS---HHHHHHHHCCS--EEEE-ETTEEEEEEEEEEEE-SS
T ss_pred CcccccCcccHHHHHHHhhhccccccccccccccccccccccCCHHHhhhhhccCCcEEEEccCCceeeeeehhHHhcCC
Confidence 578999999999999884332 1211 1111112233456788999996689999999887766665
Q ss_pred ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 67 ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 67 ~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.+...+..+.+.|. +......-||.++.+-+.. .++-.+.+.+.+ ....-.+. -||...+
T Consensus 81 rptVlV~ri~~~~~-~~~~~~~GLLrAvvKSAYD-a~VYEv~l~l~p---~l~~A~~a-~~~~~~~ 140 (161)
T PF09390_consen 81 RPTVLVRRILLAPG-EPEEVYEGLLRAVVKSAYD-AGVYEVHLHLDP---ELEAAARA-EGFRLGG 140 (161)
T ss_dssp SEEEEEEEE---EE-SSHHHHHHHHHHHHHHHHH-TT-SEEEE---T---HHHHHHHH-TT----S
T ss_pred CceEEEEEeecCCC-CcHHHHHHHHHHHHHhhhc-cceEEEEeeCCH---HHHHHHhh-cccccCC
Confidence 55667767665543 3346666799999999988 899999999888 44455666 7888666
No 99
>PHA00432 internal virion protein A
Probab=96.68 E-value=0.012 Score=41.63 Aligned_cols=115 Identities=11% Similarity=-0.001 Sum_probs=64.7
Q ss_pred eEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHH-----hcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEE
Q 028270 2 VCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHI-----LSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLA 76 (211)
Q Consensus 2 i~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~-----~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~ 76 (211)
|.|||+|.+|+..+ .+... .... ++.+ +..+..++.+.. +|.+++++. ..+.+.+.+..-.
T Consensus 1 m~I~paT~~di~~~-~lr~~------D~~E-~~a~g~~~~~~~s~~~~~~~~-~G~~~aI~G-----n~G~~vW~v~T~~ 66 (137)
T PHA00432 1 MYIRQTTERDFDVF-NPSFE------DILE-AKAYGIEPSFPPDSECVTLSL-DGFVLAIGG-----NQGDQVWFVTSDQ 66 (137)
T ss_pred CccccccHHHHHHc-CCCHH------HHHH-HHhcCCCCCCCCCceEEEEec-CCeEEEEec-----CCCCceEEEecHH
Confidence 46899999999887 22111 0001 1111 122345666666 999988882 2121122333323
Q ss_pred EcCCccccCHHHHHHHHHHHHHHHh-cCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 77 VLRTHRKLGLATKLMNAAQSAMEQV-FGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 77 V~p~~rg~Gig~~Ll~~~~~~~~~~-~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
|..- .+..-+.+.+.+..+.... ...+.++-.|...|..+++|.+. +||+....
T Consensus 67 v~~~--~~~~~reF~k~~~~~ld~ml~~yp~LwNyV~~~N~~hir~Lk~-lGf~f~~e 121 (137)
T PHA00432 67 VWRL--TKKEKREFRKLIMEYRDMMLDQYPSLWNYVWVGNKSHIRFLKS-IGAVFHNE 121 (137)
T ss_pred hhhC--ChhhhHHHHHHHHHHHHHHHHhhhhhheeeecCCHHHHHHHHH-cCeeeecc
Confidence 3220 1122233333333333221 24777899999999999999999 99998875
No 100
>COG1243 ELP3 Histone acetyltransferase [Transcription / Chromatin structure and dynamics]
Probab=96.56 E-value=0.0041 Score=52.46 Aligned_cols=76 Identities=17% Similarity=0.287 Sum_probs=57.8
Q ss_pred CCcEEEEEEEEEecCCCc-----------e-------eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEE
Q 028270 50 NGRIVGYVLAKMEEESNE-----------C-------HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHV 111 (211)
Q Consensus 50 ~g~ivG~~~~~~~~~~~~-----------~-------~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v 111 (211)
++-++|+..++.+..... + ..-+.. . ...||.+|+|+.||+.+.+.+.+ .+..+|.+..
T Consensus 415 ~d~lig~lrlR~p~e~~~r~e~~~~~aivrelhvyg~~vpig~-~-~~~~QH~G~G~~L~~~AE~ia~e-e~~~ki~viS 491 (515)
T COG1243 415 NDILIGFLRLREPSEGAHREEIDDKTAIVRELHVYGSEVPIGK-R-EDEWQHRGYGRELLEEAERIARE-EGAKKILVIS 491 (515)
T ss_pred hhhhhheeeecccccchhhhhcccchhhhhhhhcccccccccc-C-cchhhcccHHHHHHHHHHHHHHh-hccccEEEEe
Confidence 367899999887765321 0 111222 2 46799999999999999999999 6788888765
Q ss_pred ecCcHHHHHHHhhhcCceEec
Q 028270 112 RKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 112 ~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.. .++.+|+| +||...+
T Consensus 492 gi---G~ReYy~k-~GY~~~g 508 (515)
T COG1243 492 GI---GVREYYRK-LGYELDG 508 (515)
T ss_pred cc---cHHHHHHH-hCccccC
Confidence 55 67899999 9999877
No 101
>cd04264 DUF619-NAGS DUF619 domain of various N-acetylglutamate Synthases of the fungal arginine-biosynthetic pathway and urea cycle found in humans and fish. DUF619-NAGS: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.43 E-value=0.018 Score=38.76 Aligned_cols=61 Identities=15% Similarity=0.084 Sum_probs=46.5
Q ss_pred CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHH
Q 028270 50 NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRA 117 (211)
Q Consensus 50 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~ 117 (211)
++...|++.+....... ...++..++|.+..||.|+|..++..+.+. .+.+...+.++|+.
T Consensus 16 ~e~y~~~aIvt~~~~~~-~~~yLdKfaV~~~~~g~gvad~vf~~i~~d------~~~L~Wrsr~~n~~ 76 (99)
T cd04264 16 SEGYNAAAIVTYEGVNN-GVPYLDKFAVSSSAQGEGTSDALWRRLRRD------FPKLFWRSRKTNPI 76 (99)
T ss_pred eCCceEEEEEeccCCCC-CceEEEEEEEchhhhhcChHHHHHHHHHhh------CCceEEEeCCCCcc
Confidence 45577777776654211 178999999999999999999999977764 34577788888875
No 102
>PF04768 DUF619: Protein of unknown function (DUF619); InterPro: IPR006855 This region of unknown function is found at the C terminus of Neurospora crassa acetylglutamate synthase (2.7.2.8 from EC). It is also found C-terminal to the amino acid kinase region in some fungal acetylglutamate kinase enzymes (IPR001048 from INTERPRO). These enzymes play a role in arginine biosynthesis.; PDB: 3S6K_A 4AB7_F 3ZZF_B 3ZZI_D 3ZZH_A 3ZZG_A 3S6G_Y 3S6H_A 3S7Y_A.
Probab=96.42 E-value=0.076 Score=39.45 Aligned_cols=115 Identities=16% Similarity=0.122 Sum_probs=74.0
Q ss_pred eCChh-hHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCcccc
Q 028270 6 KATVD-DLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKL 84 (211)
Q Consensus 6 ~~~~~-D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~ 84 (211)
.+..- |.+.|.++....|........++..+.......|+.. +-+.++.+......... ...++..++|.+..||.
T Consensus 27 s~~~~~d~~kL~~ll~~sf~~~~~v~~yl~~l~~~~~~iy~d~--~y~~~AIVt~e~~~~~~-~v~yLdKFav~~~~~g~ 103 (170)
T PF04768_consen 27 SLSEFVDLDKLRALLERSFGGKLDVDHYLDRLNNRLFKIYVDE--DYEGAAIVTPEGPDSNG-PVPYLDKFAVSKSAQGS 103 (170)
T ss_dssp SCCCSS-HHHHHHHHHHHSTSSSBHTTHHHHHHTS-SEEEEET--TSSEEEEEEEE-SCTCT-SEEEEEEEEE-HHHHHT
T ss_pred CccccCCHHHHHHHHHhcccccccHHHHHHHhhccceEEEEeC--CceEEEEEEecCCCCCC-CCeEEEEEEecchhhhc
Confidence 34444 8999999999999666677777788766666666633 22334433332222222 38999999999999999
Q ss_pred CHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHH-hhhcCceE
Q 028270 85 GLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLY-TETLGYKI 130 (211)
Q Consensus 85 Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y-~k~~GF~~ 130 (211)
|++..+.+.+.+.. +.+...+..+|+. .++| ++.-|+-.
T Consensus 104 gv~D~vf~~i~~d~------p~L~Wrsr~~n~~-~~Wyf~rs~G~~~ 143 (170)
T PF04768_consen 104 GVADNVFNAIRKDF------PKLFWRSREDNPN-NKWYFERSDGSFK 143 (170)
T ss_dssp THHHHHHHHHHHH-------SSEEEEEETT-TT-HHHHHHH-SEEEE
T ss_pred CHHHHHHHHHHHhc------cceEEEecCCCCc-ccEEEEeeEEEEE
Confidence 99999999885542 2378888888875 4554 44346554
No 103
>KOG2036 consensus Predicted P-loop ATPase fused to an acetyltransferase [General function prediction only]
Probab=96.41 E-value=0.017 Score=51.26 Aligned_cols=85 Identities=19% Similarity=0.225 Sum_probs=58.7
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCC-------------cEE----------------------------
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGA-------------EYV---------------------------- 107 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~-------------~~i---------------------------- 107 (211)
.+.|..++|+|+|++.|||++.++-+.++... ... +++
T Consensus 614 GaRIVRIAvhP~y~~MGYGsrAvqLL~~y~eG-~~~~i~e~~~~~~~~~k~v~e~~~vsllee~i~pR~~lppLL~~L~e 692 (1011)
T KOG2036|consen 614 GARIVRIAVHPEYQKMGYGSRAVQLLTDYFEG-KFTSISEDVLAVDHSIKRVEEAEKVSLLEEQIKPRKDLPPLLLKLSE 692 (1011)
T ss_pred CceEEEEEeccchhccCccHHHHHHHHHHHhc-cCCCccccccccCccccccchhhhhhhhhhhcccccCCCceeeEccc
Confidence 45699999999999999999999999888643 111 000
Q ss_pred -------EEEEecC-cHHHHHHHhhhcCceEeceeecccc-CCcceeeeeecccCCC
Q 028270 108 -------SLHVRKS-NRAAFNLYTETLGYKIHDVEAKYYA-DGEDAYDMRKQLKGKQ 155 (211)
Q Consensus 108 -------~l~v~~~-N~~a~~~Y~k~~GF~~~~~~~~~~~-~~~d~~~m~k~l~~~~ 155 (211)
|+.|.-. -+...+||++ .||.++.....-.. .|+...+|-|.+.+..
T Consensus 693 r~perldylGvSfGLT~~L~kFWk~-~gF~PvylrQt~n~lTGEHtcimLk~L~~~e 748 (1011)
T KOG2036|consen 693 RPPERLDYLGVSFGLTPSLLKFWKK-NGFVPVYLRQTSNDLTGEHTCIMLKTLEGDE 748 (1011)
T ss_pred CCCcccceeeecccCCHHHHHHHHh-cCceeEEeeccccccccceeEEEEecCCCcc
Confidence 1222111 2356789999 99999884443222 3688899999998443
No 104
>PF11039 DUF2824: Protein of unknown function (DUF2824); InterPro: IPR022568 This family of proteins has no known function. Members of the family are found in P22-like viruses and bacteria. Some of the phage members have been annotated as head assembly proteins, but this has not been confirmed.
Probab=96.40 E-value=0.16 Score=35.59 Aligned_cols=129 Identities=14% Similarity=0.029 Sum_probs=79.6
Q ss_pred CeEEEeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 1 MVCIRKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 1 Mi~ir~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
||.++|.+.-|+-+...-......-.-+- ......++..|+-..+.+.++|++.+....+. ...+ .-.-+|+
T Consensus 1 ~~~~~~~~~~~l~e~~~n~~~~~~~~nnG----d~Y~~K~~~~Y~gVyeg~~l~Gi~~v~~i~~~---~vec-Ha~y~P~ 72 (151)
T PF11039_consen 1 MIQFKPTRNIDLIEAVGNHADIIAGSNNG----DGYDIKPDQLYLGVYEGGQLGGIVYVEEIQPS---VVEC-HAMYDPG 72 (151)
T ss_pred CceeccCCcccHHHHhCCCcceeccccCC----cceeecCccEEEEEEeceEEEEEEEEEEEeee---eEEE-Eeeeccc
Confidence 77888877766654432111111000000 01112344555555558899999888776552 3333 3345899
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeeccccC
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAKYYAD 140 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~ 140 (211)
+|| ++...-....+|+.+...+..+...|...-+-.+-+.+= +|.+.++..+.|+..
T Consensus 73 fRG--~a~~~~~~F~kwlL~Ns~f~~vit~vp~kt~~Grvic~l-lg~~RVG~id~~~~g 129 (151)
T PF11039_consen 73 FRG--YALEIGRLFCKWLLENSPFQNVITFVPDKTRYGRVICRL-LGARRVGHIDDYFKG 129 (151)
T ss_pred cch--hHHHHHHHHHHHHhcCCceeEEEEecccccccchhHhhh-hCCceeeeHHHHhcC
Confidence 999 888888888899887666666655555444444445555 899999999998864
No 105
>cd04265 DUF619-NAGS-U DUF619 domain of various N-acetylglutamate Synthases (NAGS) of the urea (U) cycle of humans and fish. This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present in C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. The DUF619 domain function has yet to be characterized.
Probab=96.12 E-value=0.038 Score=37.15 Aligned_cols=57 Identities=14% Similarity=0.099 Sum_probs=42.2
Q ss_pred EEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHH
Q 028270 53 IVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRA 117 (211)
Q Consensus 53 ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~ 117 (211)
.=|++.+.+..... ..++..++|.+..||.|+|..|++.+.+.. +.+...+.++|+.
T Consensus 20 y~~~aivt~~~~~~--~~yLdKfaV~~~~~g~gv~d~vf~~i~~d~------~~L~Wrsr~~n~~ 76 (99)
T cd04265 20 YNAAAIVTNEEVDG--VPYLDKFAVSSSAQGEGTGEALWRRLRRDF------PKLFWRSRSTNPI 76 (99)
T ss_pred CcEEEEEeccCCCC--ceEEEEEEEchhhhhcChHHHHHHHHHhhC------CceEEEeCCCCcc
Confidence 44555554443112 789999999999999999999999777652 3477788888865
No 106
>PF04377 ATE_C: Arginine-tRNA-protein transferase, C terminus; InterPro: IPR007472 Arginine-tRNA-protein transferase catalyses the post-translational conjugation of arginine to the N terminus of a protein. In eukaryotes, this functions as part of the N terminus rule pathway of protein degradation by conjugating a destabilising amino acid to the N-terminal aspartate or glutamate of a protein, targeting the protein for ubiquitin-dependent proteolysis. N-terminal cysteine is sometimes modified []. In Saccharomyces cerevisiae, Cys20, 23, 94 and/or 95 are thought to be important for activity []. Of these, only Cys 94 appears to be completely conserved in this family. This entry represents the C-terminal region of the enzyme arginine-tRNA-protein transferase, found in both eukaryotic and prokaryotic enzymes.; GO: 0004057 arginyltransferase activity, 0016598 protein arginylation
Probab=96.02 E-value=0.099 Score=36.93 Aligned_cols=96 Identities=14% Similarity=0.165 Sum_probs=64.7
Q ss_pred hHHHHHHHhcCC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEE
Q 028270 29 MKYYFYHILSWP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYV 107 (211)
Q Consensus 29 ~~~~~~~~~~~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i 107 (211)
...+...+...+ ...++....+|++||++.+....+. ...+ -..-+|++..+.+|+..+-.-++.+++ .|.+.+
T Consensus 25 ~~~y~~fl~~~~~~t~~~~~~~~~kLiav~v~D~l~~g---lSaV-Y~fyDPd~~~~SlG~~~iL~eI~~a~~-~~l~y~ 99 (128)
T PF04377_consen 25 QEQYRRFLCSSPLGTYHLEYRLDGKLIAVAVVDILPDG---LSAV-YTFYDPDYSKRSLGTYSILREIELARE-LGLPYY 99 (128)
T ss_pred HHHHHHHHhCCCCCCEEEEEEeCCeEEEEEEeecccch---hhhe-eeeeCCCccccCcHHHHHHHHHHHHHH-cCCCEE
Confidence 444444444333 3344444459999999988876653 2233 334599999999999999999999999 899999
Q ss_pred EEEEecCcHHHHHHHhhhcCceEec
Q 028270 108 SLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 108 ~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
++.-...+-+.++ |+. .|++..
T Consensus 100 YLGY~I~~c~kM~-YK~--~f~P~e 121 (128)
T PF04377_consen 100 YLGYWIHGCPKMN-YKA--RFRPHE 121 (128)
T ss_pred eeCeEeCCCCccc-chh--cCCcee
Confidence 9876665544333 222 455544
No 107
>PRK01305 arginyl-tRNA-protein transferase; Provisional
Probab=95.55 E-value=0.25 Score=38.76 Aligned_cols=98 Identities=11% Similarity=0.110 Sum_probs=66.2
Q ss_pred hHHHHHHHhcCC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEE
Q 028270 29 MKYYFYHILSWP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYV 107 (211)
Q Consensus 29 ~~~~~~~~~~~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i 107 (211)
...|...+...+ ...++....+|++||++.+....+. ...+ -..-+|++-.+++|+..+-.-++.+++ +|.+.+
T Consensus 130 ~~~y~~Fl~~~~~~t~~~ey~~~g~LiaVav~D~l~d~---lSAV-Y~FyDPd~~~~SLG~~~iL~qI~~ak~-~gl~y~ 204 (240)
T PRK01305 130 RDQYAQFLEDSWVNTRFIEFRGDGKLVAVAVTDVLDDG---LSAV-YTFYDPDEEHRSLGTFAILWQIELAKR-LGLPYV 204 (240)
T ss_pred HHHHHHHHhcCCCCcEEEEEEeCCeEEEEEEEeccCCc---eeeE-EEeeCCCccccCCHHHHHHHHHHHHHH-cCCCeE
Confidence 344433333333 2334444458999999998877653 2333 445699999999999999999999999 899999
Q ss_pred EEEEecCcHHHHHHHhhhcCceEecee
Q 028270 108 SLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 108 ~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+|.-...+-+.++ |+ .-|++...+
T Consensus 205 YLGY~I~~c~kM~-YK--~~f~P~E~l 228 (240)
T PRK01305 205 YLGYWIKGSRKMN-YK--ARFRPLEIL 228 (240)
T ss_pred eeeEEECCCCccc-cc--ccCCcceee
Confidence 9987776644333 22 246555533
No 108
>COG5630 ARG2 Acetylglutamate synthase [Amino acid transport and metabolism]
Probab=95.53 E-value=0.038 Score=45.58 Aligned_cols=112 Identities=17% Similarity=0.196 Sum_probs=74.1
Q ss_pred hhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccc-cCHHH
Q 028270 10 DDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRK-LGLAT 88 (211)
Q Consensus 10 ~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg-~Gig~ 88 (211)
-|++.+..+.+..|.......+|..++...-...+|+.+ --|.+.+...........|+..++|.++.|| -||+.
T Consensus 345 Ldl~r~q~LI~~SFkRTLd~h~y~~r~~~~La~~iVsgd----Y~g~aIlTyegs~~~~vpYLDKfAVl~~aQGs~gisd 420 (495)
T COG5630 345 LDLPRLQHLIQSSFKRTLDPHYYETRINTPLARAIVSGD----YRGAAILTYEGSGENNVPYLDKFAVLDDAQGSEGISD 420 (495)
T ss_pred cCcHHHHHHHHHHHhhccCHHHHHHhccCcceeEEeecc----ceeeEEEEeeccCCCCCcceeeeeccccccccchHHH
Confidence 356778888888887777677776666433344555443 4566666666444334889999999999999 99999
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHH-HhhhcCceEe
Q 028270 89 KLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNL-YTETLGYKIH 131 (211)
Q Consensus 89 ~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~-Y~k~~GF~~~ 131 (211)
.+++-+.+..- +.+.+-...+|.. .++ |+++.|+-..
T Consensus 421 ~vfniM~e~fP-----~eL~WRSR~~N~v-NkwYf~rSvg~lk~ 458 (495)
T COG5630 421 AVFNIMREEFP-----NELFWRSRHNNQV-NKWYFARSVGYLKQ 458 (495)
T ss_pred HHHHHHHHhCc-----HhhhhhhcccCcc-hheeeehhhehhhc
Confidence 99887666432 2356666677754 443 3333565443
No 109
>KOG2535 consensus RNA polymerase II elongator complex, subunit ELP3/histone acetyltransferase [Chromatin structure and dynamics; Transcription]
Probab=95.50 E-value=0.028 Score=45.92 Aligned_cols=49 Identities=22% Similarity=0.409 Sum_probs=41.9
Q ss_pred CccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 80 THRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 80 ~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.||.+|+|..||+.+.+.++++.|-.+|.+.... ..+.+|.| +||+..+
T Consensus 498 KfQHQG~GtLLmeEAERIAr~EHgS~KiavISGV---GtR~YY~k-lGY~LdG 546 (554)
T KOG2535|consen 498 KFQHQGFGTLLMEEAERIAREEHGSGKIAVISGV---GTRNYYRK-LGYELDG 546 (554)
T ss_pred hhhhcchhhHHHHHHHHHHHHhcCCCceEEEecc---chHHHHHh-hCeeecC
Confidence 5999999999999999999988888878765544 45779999 9999877
No 110
>PLN03238 probable histone acetyltransferase MYST; Provisional
Probab=95.43 E-value=0.057 Score=43.08 Aligned_cols=57 Identities=19% Similarity=0.296 Sum_probs=41.9
Q ss_pred CeEEEEEec---CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 41 QLLYVAEDY---NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 41 ~~~~v~~~~---~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
..|||+... ...+|||..=...... ..-+.-|.|.|.||++|+|+.|++..-+..+.
T Consensus 127 FlFYVl~e~d~~g~h~vGYFSKEK~s~~---~nNLaCIltLPpyQrkGyG~~LI~fSYeLSr~ 186 (290)
T PLN03238 127 FLFYVMTEVDDHGSHIVGYFSKEKVSAE---DYNLACILTLPPYQRKGYGKFLISFAYELSKR 186 (290)
T ss_pred eEEEEEEEecCCCcEEEEEeceeccccC---CCcEEEEEecChhhhccHhHhHHHHHhHHhhc
Confidence 346666542 2469998876655432 23467788999999999999999998887766
No 111
>PF01853 MOZ_SAS: MOZ/SAS family; InterPro: IPR002717 Moz is a monocytic leukemia Zn_finger protein and the SAS protein from Saccharomyces cerevisiae (Baker's yeast) is involved in silencing the Hmr locus. These proteins were reported to be homologous to acetyltransferases [] but this similarity is not supported by standard sequence analysis.; GO: 0016747 transferase activity, transferring acyl groups other than amino-acyl groups, 0006355 regulation of transcription, DNA-dependent, 0005634 nucleus; PDB: 3TO6_A 1MJA_A 1MJ9_A 3TO7_A 3TO9_A 1MJB_A 1FY7_A 2OZU_A 2RC4_A 2OU2_A ....
Probab=95.37 E-value=0.14 Score=38.38 Aligned_cols=58 Identities=21% Similarity=0.341 Sum_probs=40.3
Q ss_pred CCeEEEEEec-C--CcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 40 PQLLYVAEDY-N--GRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 40 ~~~~~v~~~~-~--g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
+-.|||+... + -.+||+..-...... ..-+.-|.|.|.||++|+|+.|++.--..++.
T Consensus 51 ~F~FYVl~e~d~~g~h~vGyFSKEk~s~~---~~NLsCIl~lP~yQrkGyG~~LI~fSY~LSr~ 111 (188)
T PF01853_consen 51 PFLFYVLTEKDDDGFHIVGYFSKEKESWD---NNNLSCILTLPPYQRKGYGRFLIDFSYELSRR 111 (188)
T ss_dssp TEEEEEEEEEETTEEEEEEEEEEESS-TT----EEESEEEE-GGGTTSSHHHHHHHHHHHHHHH
T ss_pred ceEEEEEEEecCccceeEEEEEEEecccC---CeeEeehhhcchhhhcchhhhhhhhHHHHhhc
Confidence 3346666542 2 258888876544332 34677889999999999999999998888876
No 112
>PTZ00064 histone acetyltransferase; Provisional
Probab=95.10 E-value=0.052 Score=46.42 Aligned_cols=58 Identities=19% Similarity=0.307 Sum_probs=42.2
Q ss_pred CCeEEEEEec---CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 40 PQLLYVAEDY---NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 40 ~~~~~v~~~~---~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
+..|||+... .-.+|||+.=...... ..-+..|.|.|.||++|||+.|++.--+..+.
T Consensus 355 pFlFYVLtE~D~~G~HiVGYFSKEK~S~~---~nNLACILtLPpyQRKGYGklLIdfSYeLSrr 415 (552)
T PTZ00064 355 PFLFYIVTEVDEEGCHIVGYFSKEKVSLL---HYNLACILTLPCYQRKGYGKLLVDLSYKLSLK 415 (552)
T ss_pred ceEEEEEEEecCCCcEEEEEecccccCcc---cCceEEEEecchhhhcchhhhhhhhhhhhhhh
Confidence 3456666542 2379998876655433 23567888999999999999999988887765
No 113
>PLN03239 histone acetyltransferase; Provisional
Probab=94.65 E-value=0.099 Score=42.91 Aligned_cols=57 Identities=16% Similarity=0.205 Sum_probs=41.5
Q ss_pred CeEEEEEe--c-CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 41 QLLYVAED--Y-NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 41 ~~~~v~~~--~-~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
..|||+.. + +-.+||++.=...... ..-+.-|.|.|.||++|+|+.|++..-+..+.
T Consensus 185 FlFYVl~e~D~~g~h~vGYFSKEK~s~~---~~NLaCIltLPpyQrkGyG~lLI~fSYeLSr~ 244 (351)
T PLN03239 185 FLFYVLCEVDERGFHPVGYYSKEKYSDV---GYNLACILTFPAHQRKGYGRFLIAFSYELSKK 244 (351)
T ss_pred eEEEEEEEecCCceEEEEEeeecccCCC---CCceEEEEecChhhhcchhhhhHhhhhHhhhh
Confidence 34666653 1 2378998876654432 23567888999999999999999998887766
No 114
>PF09924 DUF2156: Uncharacterized conserved protein (DUF2156); InterPro: IPR024320 This domain of unknown function is found in uncharacterised proteins and in Lysylphosphatidylglycerol synthetase, which catalyses the transfer of a lysyl group from L-lysyl-tRNA(Lys) to membrane-bound phosphatidylglycerol [].; PDB: 2HQY_A.
Probab=94.32 E-value=2.3 Score=34.39 Aligned_cols=106 Identities=14% Similarity=0.053 Sum_probs=59.5
Q ss_pred EEEeC---ChhhHHHHHHhhhhcCCcc-chhHHHHHHHh----cCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEE
Q 028270 3 CIRKA---TVDDLLAMQACNLFCLPEN-YQMKYYFYHIL----SWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITS 74 (211)
Q Consensus 3 ~ir~~---~~~D~~~l~~l~~~~~~~~-~~~~~~~~~~~----~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~ 74 (211)
.+++. ++++.+++.++...+.... .....+....+ .....++++...+|+|+|++.+.+..... ...+..
T Consensus 134 ~~~~~~~~~~~~~~el~~i~~~W~~~~~~~e~~~~~~~~~~~~~~~~~~~~~~~~dgki~af~~~~~~~~~~--~~~~~~ 211 (299)
T PF09924_consen 134 EVVPIPELDPELRDELLEISDEWLKEKERPERGFIMGALEHFDELGLRGFVARVADGKIVAFAIGSPLGGRD--GWSIDF 211 (299)
T ss_dssp EEEE-----GGGHHHHHHHHHHHHHHCTHHHHHHHHHHHHTHHHHT-EEEEEEE-TTEEEEEEEEEEEE-TT--EEEEEE
T ss_pred EEEECCCCCHHHHHHHHHHHHHHHhcCchhHHHHHhccccchhhcCceEEEEEECCCcEEEEEEEEEccCCc--cEEEEE
Confidence 45555 7888888888876655332 12222222222 22445666666589999999999887321 333333
Q ss_pred EEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEe
Q 028270 75 LAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVR 112 (211)
Q Consensus 75 l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~ 112 (211)
.--+++ --+|+-..|+..++..+++ .|++.+.|...
T Consensus 212 ~k~~~~-a~~G~~e~l~~~~~~~~~~-~g~~~lnLg~a 247 (299)
T PF09924_consen 212 EKADPD-APKGIYEFLNVEFAEHLKA-EGVEYLNLGFA 247 (299)
T ss_dssp EEE-TT--STTHHHHHHHHHHHHS---TT--EEE----
T ss_pred EecCCC-CCCcHHHHHHHHHHHhhhh-CCceEEEcccc
Confidence 334555 4578999999999999997 69988875433
No 115
>PLN00104 MYST -like histone acetyltransferase; Provisional
Probab=94.30 E-value=0.062 Score=45.67 Aligned_cols=57 Identities=18% Similarity=0.287 Sum_probs=41.6
Q ss_pred CeEEEEEec---CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 41 QLLYVAEDY---NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 41 ~~~~v~~~~---~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
..|||+... .-.+|||+.=......+ .-+..|.|+|.||++|||+.|++..-+..+.
T Consensus 278 FlFYvl~e~d~~g~h~vGyFSKEk~s~~~---~NLaCIltlP~yQrkGyG~~LI~~SYeLSr~ 337 (450)
T PLN00104 278 FLFYVLCECDDRGCHMVGYFSKEKHSEED---YNLACILTLPPYQRKGYGKFLIAFSYELSKR 337 (450)
T ss_pred eEEEEEEEecCCCcEEEEEecccccCcCC---CceEEEEecchhhhcchhheehhheehhhhc
Confidence 346666542 23899988766554432 3567788999999999999999988777665
No 116
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=93.66 E-value=0.54 Score=38.69 Aligned_cols=59 Identities=15% Similarity=0.055 Sum_probs=45.0
Q ss_pred eEEEEEe-cCCcEEEEEEEEEecCCC----ceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 42 LLYVAED-YNGRIVGYVLAKMEEESN----ECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 42 ~~~v~~~-~~g~ivG~~~~~~~~~~~----~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
+...+.. ..+++|||+...+..-.- .+...|..++|+...|+++++--|+.++.+++.-
T Consensus 135 WHiGVRv~~s~kLVaFIsaiP~~irvrdk~vk~veINFLCVHKkLRSKRlaPvLIrEITRRvnl 198 (421)
T KOG2779|consen 135 WHIGVRVKSSKKLVAFISAIPATIRVRDKVVKMVEINFLCVHKKLRSKRLAPVLIREITRRVNL 198 (421)
T ss_pred eEEEEEEecCCceEEEEeccccEEEEccceeeeeeEEEEEEehhhhccccccHHHHHHHHHhhh
Confidence 4444443 357999999876542221 1478899999999999999999999999998754
No 117
>KOG4601 consensus Uncharacterized conserved protein [Function unknown]
Probab=92.97 E-value=1.3 Score=34.22 Aligned_cols=57 Identities=14% Similarity=0.120 Sum_probs=41.2
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCce
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYK 129 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~ 129 (211)
...|..++|++..|+.|.|.+|++.+++. .+..---+.++.-....++|.+|++|-+
T Consensus 108 ~lcILDFyVheS~QR~G~G~~lfdyMl~k----E~vephQ~a~DrPS~kLl~Fm~khYgl~ 164 (264)
T KOG4601|consen 108 ALCILDFYVHESEQRSGNGFKLFDYMLKK----ENVEPHQCAFDRPSAKLLQFMEKHYGLK 164 (264)
T ss_pred CceEEEEEeehhhhhcCchHHHHHHHHHh----cCCCchheeccChHHHHHHHHHHhcCcc
Confidence 45688999999999999999999988774 3544444445444446677877745644
No 118
>PF11124 Pho86: Inorganic phosphate transporter Pho86; InterPro: IPR024297 Pho86p is an ER protein which is produced in response to phosphate starvation. It is essential for growth when phosphate levels are limiting []. Pho86p is also involved in the regulation of Pho84p, a high-affinity phosphate transporter, which is localised to the endoplasmic reticulum (ER) in low phosphate medium. When the level of phosphate increases Pho84p is transported to the vacuole. Pho86p is required for packaging of Pho84p in to COPII vesicles [].
Probab=92.54 E-value=2.2 Score=34.51 Aligned_cols=88 Identities=14% Similarity=0.153 Sum_probs=67.8
Q ss_pred EEEEEecCCcEEEEEEEEEecCCCc---eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHh---c-----CCc-EEEEE
Q 028270 43 LYVAEDYNGRIVGYVLAKMEEESNE---CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQV---F-----GAE-YVSLH 110 (211)
Q Consensus 43 ~~v~~~~~g~ivG~~~~~~~~~~~~---~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~---~-----g~~-~i~l~ 110 (211)
-.++.. .+.+|+.+.+.+...... -...|..++|..=|..-|+=..|+++++-+.++. . |.. .+.+.
T Consensus 171 T~IIvY-RetPIAiisl~~~~~~St~~~~vv~ItgigvRkVy~Ksgi~e~LidWA~~Rtr~l~~ey~k~k~~~si~ll~d 249 (304)
T PF11124_consen 171 THIIVY-RETPIAIISLVPNKDQSTKENFVVKITGIGVRKVYVKSGIDEDLIDWAMLRTRQLYKEYLKGKKGCSIKLLVD 249 (304)
T ss_pred ceEEEE-cCCceEEEEeccccccCCCceEEEEEeeeEEEEEEeecChHHHHHHHHHHHHHHHHHHhccccccceEEEEEE
Confidence 444444 778999999988766543 2567889999999999999999999998776651 1 111 24457
Q ss_pred EecCcHHHHHHHhhhcCceEec
Q 028270 111 VRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 111 v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+...+....++.++ .||+.+.
T Consensus 250 ~YSFD~~~~k~L~~-~gF~~i~ 270 (304)
T PF11124_consen 250 VYSFDKDMKKTLKK-KGFKKIS 270 (304)
T ss_pred eeeccHHHHHHHHH-CCCeeee
Confidence 78888999999999 9999887
No 119
>COG2401 ABC-type ATPase fused to a predicted acetyltransferase domain [General function prediction only]
Probab=92.00 E-value=0.11 Score=43.95 Aligned_cols=61 Identities=15% Similarity=0.079 Sum_probs=43.1
Q ss_pred EEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEE--EecCcH---HHHHHHhhhcCceEec
Q 028270 70 GHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLH--VRKSNR---AAFNLYTETLGYKIHD 132 (211)
Q Consensus 70 ~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~--v~~~N~---~a~~~Y~k~~GF~~~~ 132 (211)
+.|..+.|+|+||+-|+|..-+..+.+|..+ .......-. ....-. +-..|+++ .||+...
T Consensus 242 ariarvvvhpdyr~dglg~~sv~~a~ewI~e-RriPEmr~rkHlvetiaqmarynpffe~-~gfkylw 307 (593)
T COG2401 242 ARIARVVVHPDYRADGLGQLSVIAALEWIIE-RRIPEMRPRKHLVETIAQMARYNPFFEK-VGFKYLW 307 (593)
T ss_pred hheeEEEeccccccCccchhHHHHHHHHHHH-hhChhhhhhhhHHHHHHHHHhcCchhhh-hceeeee
Confidence 4589999999999999999999999999988 454433211 111100 11238999 9998764
No 120
>PF13444 Acetyltransf_5: Acetyltransferase (GNAT) domain
Probab=91.73 E-value=0.62 Score=31.28 Aligned_cols=53 Identities=19% Similarity=0.158 Sum_probs=36.9
Q ss_pred CCCeEEEEEecCCcEEEEEEEEEecCCC--------------------ceeEEEEEEEEcCCccccCHHHHHH
Q 028270 39 WPQLLYVAEDYNGRIVGYVLAKMEEESN--------------------ECHGHITSLAVLRTHRKLGLATKLM 91 (211)
Q Consensus 39 ~~~~~~v~~~~~g~ivG~~~~~~~~~~~--------------------~~~~~i~~l~V~p~~rg~Gig~~Ll 91 (211)
.....+++.+.+.++||++.+....... .+.+++..++|+|+||++.....|+
T Consensus 28 ~~~~h~lv~~~~~~~VGt~Rl~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~EisRl~V~~~~R~~~~~~~L~ 100 (101)
T PF13444_consen 28 EHSVHLLVRDKNTEVVGTVRLILPSPAGPLEGFYSESEFDLDPLLPLPRRVAEISRLCVHPEYRRRKVLLLLW 100 (101)
T ss_pred CCccEEEEEECCCCEEEEEEeeccccccccccCCchhhcCcchhhccCCcEEEeehheECHhHCCChHHHHHh
Confidence 3344555555233599999887665532 1467899999999999988777664
No 121
>KOG2747 consensus Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=91.33 E-value=0.24 Score=41.34 Aligned_cols=58 Identities=19% Similarity=0.321 Sum_probs=37.2
Q ss_pred CCeEEEEEecC-CcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 40 PQLLYVAEDYN-GRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 40 ~~~~~v~~~~~-g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
+..|||+...+ ...|||+.=...... ..-+.-|-|.|.||++|+|+.|++.--+-.+.
T Consensus 233 pFlFYVlte~d~~G~VGYFSKEK~s~~---~yNlaCILtLPpyQRkGYGklLIdFSYeLSr~ 291 (396)
T KOG2747|consen 233 PFLFYVLTECDSYGCVGYFSKEKESSE---NYNLACILTLPPYQRKGYGKLLIDFSYELSRR 291 (396)
T ss_pred ceEEEEEEecCCcceeeeecccccccc---ccceeeeeecChhhhcccchhhhhhhhhhhcc
Confidence 44566665422 224565543333322 23466788999999999999999987776544
No 122
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=90.94 E-value=2.2 Score=36.36 Aligned_cols=107 Identities=11% Similarity=0.099 Sum_probs=59.1
Q ss_pred EEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcC--CccccCHHHHHHHHHHHHHHHhcCCcEEEEEE---------
Q 028270 43 LYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLR--THRKLGLATKLMNAAQSAMEQVFGAEYVSLHV--------- 111 (211)
Q Consensus 43 ~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p--~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v--------- 111 (211)
.+.+.++++.|+|.+.+........ ..+..+-=.| +|...-+-..++..+..++++ .++-.|.+..
T Consensus 37 ~vgv~~d~~~v~aa~ll~~~~~~~g--~~~~yiprGPv~d~~d~ell~~f~~~Lk~~akk-~~a~~lridP~~~~~~~~~ 113 (406)
T PF02388_consen 37 RVGVKDDGGEVAAAALLLRKKPFKG--FKYAYIPRGPVMDYSDEELLEFFLEELKKYAKK-KRALFLRIDPNVIYQERDE 113 (406)
T ss_dssp EEEEE-TTS-EEEEEEEEEEECTTT--CEEEEETT--EC-TT-HHHHHHHHHHHHHHHCT-TTEEEEEE--S-EEECE-T
T ss_pred EEEEEeCCCeEEEEEEEEEeccCCc--eeEEEECCCCCCCCCCHHHHHHHHHHHHHHHHH-CCEEEEEEeCchhhhhccc
Confidence 3444443477777765555443311 1122222235 788888888889999998876 4543333211
Q ss_pred ------ecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeecccC
Q 028270 112 ------RKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLKG 153 (211)
Q Consensus 112 ------~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l~~ 153 (211)
...|...+..+++ +||...+....+-......+.|+++|.+
T Consensus 114 ~g~~~~~~~~~~~~~~l~~-~G~~~~g~~~~~~~~~qpr~~~v~dL~~ 160 (406)
T PF02388_consen 114 DGEPIEGEENDELIENLKA-LGFRHQGFTKGYDDTIQPRWTYVKDLTG 160 (406)
T ss_dssp TS-EEEE-S-THHHHHHHH-TT-CCTS-SSSTTSSSS-SEEEEEEGCC
T ss_pred ccccccCcchHHHHHHHHh-cCceecCcccCCCcccCccEEEEEECCC
Confidence 2346678899999 9999888665443334566788888877
No 123
>KOG2696 consensus Histone acetyltransferase type b catalytic subunit [Chromatin structure and dynamics]
Probab=90.93 E-value=0.83 Score=37.80 Aligned_cols=48 Identities=21% Similarity=0.238 Sum_probs=34.4
Q ss_pred EEEEEEEEEecCCCc-eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 53 IVGYVLAKMEEESNE-CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 53 ivG~~~~~~~~~~~~-~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
++|+..+........ ....|..+-+.|.||++|+|+.|++.+......
T Consensus 200 ~~gy~tiyk~y~yid~~R~RiSQmlilpPfq~~Glgs~l~E~i~r~~~~ 248 (403)
T KOG2696|consen 200 YVGYYTIYKFYEYIDRIRPRISQMLILPPFQGKGLGSQLYEAIARDYLE 248 (403)
T ss_pred eeeeEEEeehhhhhhhhhhhhheeEEeccccCCchHHHHHHHHHHhhcc
Confidence 556655543322211 256688999999999999999999999976544
No 124
>PF02799 NMT_C: Myristoyl-CoA:protein N-myristoyltransferase, C-terminal domain; InterPro: IPR022677 Myristoyl-CoA:protein N-myristoyltransferase (2.3.1.97 from EC) (Nmt) [] is the enzyme responsible for transferring a myristate group on the N-terminal glycine of a number of cellular eukaryotics and viral proteins. Nmt is a monomeric protein of about 50 to 60kDa whose sequence appears to be well conserved. The N and C-terminal domains of NMT are structurally similar, each adopting an acyl-CoA N-acyltransferase-like fold. This entry represents the C-terminal region.; GO: 0004379 glycylpeptide N-tetradecanoyltransferase activity; PDB: 2P6G_B 2P6F_F 2P6E_A 1IIC_A 1IID_A 2NMT_A 2WUU_A 1IYL_B 1NMT_B 1IYK_A ....
Probab=90.85 E-value=5.7 Score=30.04 Aligned_cols=118 Identities=15% Similarity=0.087 Sum_probs=71.7
Q ss_pred EEeCChhhHHHHHHhhhhcCC-----ccchhHHHHHHHhcCCC--eEEEEEecCCcEEEEEEEEEecCC---C--c---e
Q 028270 4 IRKATVDDLLAMQACNLFCLP-----ENYQMKYYFYHILSWPQ--LLYVAEDYNGRIVGYVLAKMEEES---N--E---C 68 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~~~-----~~~~~~~~~~~~~~~~~--~~~v~~~~~g~ivG~~~~~~~~~~---~--~---~ 68 (211)
+|+++++|++++..+.+.... ..++.+.+...++...+ ..||..+++|+|-.++.+..-+.. . . +
T Consensus 31 lR~m~~~Dv~~v~~Ll~~yl~~f~l~~~fs~eev~Hw~lp~~~Vv~syVve~~~~~ITDf~SFY~Lpstvi~~~k~~~l~ 110 (190)
T PF02799_consen 31 LRPMEEKDVPQVTKLLNKYLKKFDLAPVFSEEEVKHWFLPRKNVVYSYVVEDPDGKITDFFSFYSLPSTVIGNPKHKTLK 110 (190)
T ss_dssp EEE--GGGHHHHHHHHHHHHTTSSEEEE--HHHHHHHHS-BTTTEEEEEEEETTSEEEEEEEEEEEEEEESSSSSSSEEE
T ss_pred cccCchhhHHHHHHHHHHHHHhcccccccCHHHHHhhcccCCCeEEEEEEecCCCceeeEEEEeecceeecCCCCcccee
Confidence 799999999999998766432 23444444444444444 467777766799999877655321 1 1 2
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEe
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIH 131 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~ 131 (211)
.++....+ ... ==-.+||..++-.|++ .|++..-+.-.-+|. .|.+. +.|..-
T Consensus 111 aAY~fY~~-~~~----~~l~~Lm~DaLi~Ak~-~gfDVFNaLd~mdN~---~fL~~-lKFg~G 163 (190)
T PF02799_consen 111 AAYSFYYV-ATS----TRLKELMNDALILAKN-EGFDVFNALDLMDNS---SFLED-LKFGPG 163 (190)
T ss_dssp EEEEEEEE-ESS----SHHHHHHHHHHHHHHH-TTESEEEEESTTTGG---GTTTT-TT-EEE
T ss_pred eeeeeeee-ecC----CCHHHHHHHHHHHHHH-cCCCEEehhhhccch---hhHhh-CCccCC
Confidence 34443322 222 1235688888888888 899966665556665 47888 999854
No 125
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=89.87 E-value=3.7 Score=34.48 Aligned_cols=117 Identities=11% Similarity=0.072 Sum_probs=75.6
Q ss_pred CChhhHHHHHHhhhhcCC----ccchhHHHHHHHhc-CC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 7 ATVDDLLAMQACNLFCLP----ENYQMKYYFYHILS-WP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~----~~~~~~~~~~~~~~-~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
+++++++.+..+....+. .++-...|+..+.. .+ ..++++...+|++||++......+ ..+--.++...+
T Consensus 210 i~~~~~~~f~~~Y~~Ty~k~~~~~yLt~~FF~~l~~~m~~~~~l~~A~~~g~~Va~aL~l~~~~----~LyGRYwG~~~~ 285 (370)
T PF04339_consen 210 ITDEDWDRFYRLYQNTYAKRWGRPYLTREFFEQLAETMPEQVVLVVARRDGQPVAFALCLRGDD----TLYGRYWGCDEE 285 (370)
T ss_pred CCHHHHHHHHHHHHHHHHhhCCChhhcHHHHHHHHHhCcCCEEEEEEEECCeEEEEEEEEEeCC----EEEEeeeccccc
Confidence 467778888888776653 34434444444442 22 333444444999999999888766 566667777777
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
+.+.-+- ...-..+++|.+ .|++++.....-.++ -. .||.++.....
T Consensus 286 ~~~LHFe-~cYYq~Ie~aI~-~Gl~~f~~GaqGEHK------~~-RGf~P~~t~S~ 332 (370)
T PF04339_consen 286 IPFLHFE-LCYYQGIEYAIE-HGLRRFEPGAQGEHK------IA-RGFEPVPTYSA 332 (370)
T ss_pred ccCcchH-HHHHHHHHHHHH-cCCCEEECCcchhHH------HH-cCCccccceee
Confidence 7766532 334568888988 899988776543222 13 69998876544
No 126
>PF02474 NodA: Nodulation protein A (NodA); InterPro: IPR003484 Rhizobial nodulation (Nod) factors are signalling molecules secreted by root-nodulating rhizobia in response to flavanoids excreted by the host plant. They induce various symbiotic responses on the roots of the leguminous host plant at low concentrations, and are required for successful infection. Rhizobial Nod factors are lipo-chitooligosaccharides carrying various substituents which are important determinants of host specificity []. NodA is an N-acyl transferase which specifies the transfer of an acyl chain to the oligosaccharide backbone of Nod factor. Allelic variation of the nodA gene can contribute to the determination of host range [].; GO: 0016746 transferase activity, transferring acyl groups
Probab=89.05 E-value=1 Score=33.24 Aligned_cols=140 Identities=14% Similarity=0.106 Sum_probs=82.6
Q ss_pred CChhhHHHHHHhhhhcCCc--cchhHHHHH--HH-hcCCCeEEEEEecCCcEEEEEEEE----EecCCCceeEEEEEEEE
Q 028270 7 ATVDDLLAMQACNLFCLPE--NYQMKYYFY--HI-LSWPQLLYVAEDYNGRIVGYVLAK----MEEESNECHGHITSLAV 77 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~~--~~~~~~~~~--~~-~~~~~~~~v~~~~~g~ivG~~~~~----~~~~~~~~~~~i~~l~V 77 (211)
++..|-.++.++....++. .++..-|.- .. -..|+.-.+.++ ...+++.+.+. .......-.+++..++|
T Consensus 15 L~l~dH~eLa~ffrktYgptg~fnakpFeg~RSWAGARPElRaIgyD-~~GvaAH~G~LRRFIkVG~vDlLVaElGLygV 93 (196)
T PF02474_consen 15 LQLADHVELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIGYD-SRGVAAHMGLLRRFIKVGEVDLLVAELGLYGV 93 (196)
T ss_pred cchhhhHHHHHHHHHhcCCCCcccCccCCcccccccCCceeEEEeec-CchHHHHHHHHHHHhccCCcceeEEEEEEEEe
Confidence 4566777788888887753 233222211 01 123445556665 43444333221 11111112678899999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcC---c-------eEeceeeccccC-C----c
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLG---Y-------KIHDVEAKYYAD-G----E 142 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~G---F-------~~~~~~~~~~~~-~----~ 142 (211)
.|+.+|.||+..+ ..+.-.+++ +|+......|.. +..+.+++ ++ . ++-......+.+ + +
T Consensus 94 RpDLEGlGi~hs~-r~m~PvLq~-LgVPF~FGtVR~---al~~Hv~R-~~R~gl~ti~~gvrVRSTlpdv~~dlppTr~e 167 (196)
T PF02474_consen 94 RPDLEGLGISHSM-RVMYPVLQE-LGVPFGFGTVRH---ALRNHVER-LCRNGLATILSGVRVRSTLPDVYLDLPPTRIE 167 (196)
T ss_pred eccccccccchhh-hhhhhHHHh-cCCCeecccchH---HHHHHHHH-HhccchhhcccCceeeccCccccCCCCCcccc
Confidence 9999999999865 677777777 899988888876 66777777 65 2 222223332333 1 4
Q ss_pred ceeeeeecccC
Q 028270 143 DAYDMRKQLKG 153 (211)
Q Consensus 143 d~~~m~k~l~~ 153 (211)
|.++|+..+..
T Consensus 168 d~lv~V~Pi~r 178 (196)
T PF02474_consen 168 DVLVVVLPIGR 178 (196)
T ss_pred cceEEEEcCCC
Confidence 77777776653
No 127
>cd04266 DUF619-NAGS-FABP DUF619 domain of N-acetylglutamate Synthase of the fungal arginine-biosynthetic pathway. DUF619-NAGS-FABP: This family includes the DUF619 domain of N-acetylglutamate synthase (NAGS) of the fungal arginine-biosynthetic pathway (FABP). This NAGS (also known as arginine-requiring protein 2 or ARG2) consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. NAGS catalyzes the formation of NAG from acetylcoenzyme A and L-glutamate. The DUF619 domain, yet to be characterized, is predicted to function in NAGS association in fungi.
Probab=88.28 E-value=6.3 Score=26.93 Aligned_cols=47 Identities=26% Similarity=0.262 Sum_probs=36.7
Q ss_pred eEEEEEEEEcCCccc-cCHHHHHHHHHHHHHHHhcCCcE-EEEEEecCcHHHHHHH
Q 028270 69 HGHITSLAVLRTHRK-LGLATKLMNAAQSAMEQVFGAEY-VSLHVRKSNRAAFNLY 122 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg-~Gig~~Ll~~~~~~~~~~~g~~~-i~l~v~~~N~~a~~~Y 122 (211)
..++..++|.+.-|| .|++..+.+.+.+. ..+ +...+.++|+. .+.|
T Consensus 39 v~yLdKFav~~~~~gl~gv~D~vf~~m~~~------fp~~L~Wrsr~~n~~-n~Wy 87 (108)
T cd04266 39 IAYLDKFAVLPKAQGSDGIADILFNAMLDG------FPNELIWRSRKDNPV-NKWY 87 (108)
T ss_pred ceEEEEEEEccccccccchHHHHHHHHHHc------CCCceEEEeCCCCcc-cceE
Confidence 789999999999997 89999999877662 333 77788888875 3433
No 128
>KOG2779 consensus N-myristoyl transferase [Lipid transport and metabolism]
Probab=87.40 E-value=3.4 Score=34.19 Aligned_cols=119 Identities=17% Similarity=0.116 Sum_probs=72.4
Q ss_pred EEeCChhhHHHHHHhhhhc-----CCccchhHHHHHHHhcCCCe--EEEEEecCCcEEEEEEEEEecCC-----Cc---e
Q 028270 4 IRKATVDDLLAMQACNLFC-----LPENYQMKYYFYHILSWPQL--LYVAEDYNGRIVGYVLAKMEEES-----NE---C 68 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~-----~~~~~~~~~~~~~~~~~~~~--~~v~~~~~g~ivG~~~~~~~~~~-----~~---~ 68 (211)
+|++++.|.+++.+|.... +...+..+.+...++...+. .||+...+|+|-+|+.+..-+.. .. .
T Consensus 263 ~R~me~kDvp~V~~Ll~~yl~qf~la~~f~~eev~Hwf~p~e~VV~syVvesp~g~ITDF~SFy~lpsTv~~~~~~ktl~ 342 (421)
T KOG2779|consen 263 LREMEEKDVPAVFRLLRNYLKQFELAPVFDEEEVEHWFLPRENVVYSYVVESPNGKITDFCSFYSLPSTVMGNPKYKTLQ 342 (421)
T ss_pred cccccccchHHHHHHHHHHHHheecccccCHHHhHhhcccccceEEEEEEECCCCcccceeeEEeccccccCCCCcceee
Confidence 6899999999999986553 23344444443333333343 56777778999999988765441 11 1
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.+|.. ..|..+ -=-.+|+..++-.++. .|++-....-.-+|. .|.++ ++|-+-.
T Consensus 343 aaYly-Y~v~~~----t~~~~lvnDalilak~-~gfDVFNAld~meN~---~fl~~-LkFg~Gd 396 (421)
T KOG2779|consen 343 AAYLY-YNVATS----TPLLQLVNDALILAKQ-KGFDVFNALDLMENE---SFLKD-LKFGPGD 396 (421)
T ss_pred eeeEE-EeccCC----ccHHHHHHHHHHHHHh-cCCceeehhhhhhhh---hHHHh-cCcCcCC
Confidence 22221 112211 1135677777777887 798866655445554 58899 9997554
No 129
>COG2935 Putative arginyl-tRNA:protein arginylyltransferase [Posttranslational modification, protein turnover, chaperones]
Probab=87.30 E-value=4.8 Score=31.63 Aligned_cols=63 Identities=14% Similarity=0.095 Sum_probs=51.6
Q ss_pred CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHH
Q 028270 50 NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRA 117 (211)
Q Consensus 50 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~ 117 (211)
.|++|+++....-.+. ....-..-+|++..+.+|+..+-.-+.++++ .|...++|.-...+-+
T Consensus 159 ~G~LvAVavtDvL~dG----lSsVY~FydPd~s~~SLGt~~iL~~I~~aq~-~~l~yvYLGYwI~~c~ 221 (253)
T COG2935 159 EGKLVAVAVTDVLPDG----LSSVYTFYDPDMSKRSLGTLSILDQIAIAQR-LGLPYVYLGYWIKGCP 221 (253)
T ss_pred CCcEEEEEeeecccCc----ceeEEEEeCCChhhhcchHHHHHHHHHHHHH-hCCCeEEEEEEECCcc
Confidence 7899999988877663 2223445599999999999999999999999 8999999988776644
No 130
>PRK04531 acetylglutamate kinase; Provisional
Probab=86.06 E-value=3.4 Score=35.11 Aligned_cols=104 Identities=18% Similarity=0.108 Sum_probs=62.1
Q ss_pred hhHHHHHHhhhhcCCccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHH
Q 028270 10 DDLLAMQACNLFCLPENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATK 89 (211)
Q Consensus 10 ~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~ 89 (211)
=|++.+..+....|....... |+. ... .+-++. ++..=|.+.+..... ..++..++|.+.-||.|++..
T Consensus 262 ~d~~~l~~ll~~sf~r~~~~~-y~~----~~~-~~~~y~-~~~y~~~Aiv~~~~~----~~~Ldkf~v~~~~~~~~v~d~ 330 (398)
T PRK04531 262 LDLERLNLLIESSFGRTLKPD-YFD----TTQ-LLRAYV-SENYRAAAILTETGG----GPYLDKFAVLDDARGEGLGRA 330 (398)
T ss_pred cCHHHHHHHHhhhcccchHHH-Hhc----cCC-ceEEEE-eCCCcEEEEEecCCC----ceEeEEEEEccchhhcChHHH
Confidence 367777777766665443322 222 222 222222 333333333333322 789999999999999999999
Q ss_pred HHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceE
Q 028270 90 LMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKI 130 (211)
Q Consensus 90 Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~ 130 (211)
+++.+.+.. +.+.+.+.++|+.--=+|++.-|+..
T Consensus 331 vf~~~~~~~------~~L~Wrsr~~n~~~~Wyf~~s~G~~~ 365 (398)
T PRK04531 331 VWNVMREET------PQLFWRSRHNNTINKFYYAESDGCIK 365 (398)
T ss_pred HHHHHHhhC------CceEEEcCCCCCccceeeecccceEe
Confidence 999777653 34777888888753333444245443
No 131
>PF11090 DUF2833: Protein of unknown function (DUF2833); InterPro: IPR020335 This entry contains proteins with no known function.
Probab=83.78 E-value=4.2 Score=26.45 Aligned_cols=28 Identities=18% Similarity=0.221 Sum_probs=25.0
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
...++=.|...|...++|.++ +|++...
T Consensus 56 Y~~l~N~V~~~N~~HIRfLk~-lGA~f~~ 83 (86)
T PF11090_consen 56 YPVLWNFVWVGNKSHIRFLKS-LGAVFHN 83 (86)
T ss_pred hhheeEEEEeCCHHHHHHHHh-cCcEEcc
Confidence 666899999999999999999 9998654
No 132
>COG5027 SAS2 Histone acetyltransferase (MYST family) [Chromatin structure and dynamics]
Probab=83.12 E-value=0.94 Score=37.20 Aligned_cols=56 Identities=21% Similarity=0.361 Sum_probs=37.2
Q ss_pred CCeEEEEEecCC---cEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHH
Q 028270 40 PQLLYVAEDYNG---RIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAM 98 (211)
Q Consensus 40 ~~~~~v~~~~~g---~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~ 98 (211)
+..||++...++ .+|||+.=...... ..-+..+-+.|.||++|+|+.|++.--.-.
T Consensus 233 pflFYvl~~~~~~~~h~vGyFSKEK~S~~---~yNLaCILtLP~yQRrGYG~lLIdFSY~Ls 291 (395)
T COG5027 233 PFLFYVLTERGDTGCHLVGYFSKEKESEQ---DYNLACILTLPPYQRRGYGKLLIDFSYLLS 291 (395)
T ss_pred ceEEEEEEEcCCcceeeeeeechhhcccc---cCceEEEEecChhHhcccceEeeeeeeecc
Confidence 445666654221 47888765555443 234667788999999999999988654433
No 133
>KOG3014 consensus Protein involved in establishing cohesion between sister chromatids during DNA replication [Replication, recombination and repair]
Probab=78.93 E-value=8.7 Score=30.23 Aligned_cols=55 Identities=16% Similarity=0.085 Sum_probs=36.3
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEE-EEEEecCcHHHHHHHhh
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYV-SLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i-~l~v~~~N~~a~~~Y~k 124 (211)
.+-|..+.|.+..|++||++.|++.+........=+.+. ...+.|++.. .+|-.+
T Consensus 183 ~~GIsRIWV~s~~Rr~gIAs~lldva~~~~~~g~~isr~~iAfs~PTddG-k~lAt~ 238 (257)
T KOG3014|consen 183 ICGISRIWVSSLRRRKGIASLLLDVARCNFVYGEVISREEIAFSDPTDDG-KKLATK 238 (257)
T ss_pred EeeeEEEEeehhhhhhhhHHHHHHHHHHhhhhhcccchhheEecCCCchh-HHHHHH
Confidence 345789999999999999999999887754321111111 2355666643 555555
No 134
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=78.80 E-value=21 Score=29.27 Aligned_cols=59 Identities=12% Similarity=0.070 Sum_probs=43.3
Q ss_pred eEEEEEe-cCCcEEEEEEEEEecC----CCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHH
Q 028270 42 LLYVAED-YNGRIVGYVLAKMEEE----SNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQ 100 (211)
Q Consensus 42 ~~~v~~~-~~g~ivG~~~~~~~~~----~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~ 100 (211)
++..+.. ...++|||+...+..- ...+...+..++|+.+.|++.+.-.|+..+.+++.-
T Consensus 133 whigvRvk~t~klVaFIsa~p~~v~vRgK~~~~~evNFLCihk~lRsKRltPvLIkEiTRR~n~ 196 (451)
T COG5092 133 WHIGVRVKGTQKLVAFISAKPHLVSVRGKRSSVLEVNFLCIHKELRSKRLTPVLIKEITRRANV 196 (451)
T ss_pred eEEEEEEcccceeEEEEecceeEEEEcccccccceEEEEEEehhhhhCccchHHHHHHHHhhhh
Confidence 4555544 2348999987654321 111378899999999999999999999999998754
No 135
>cd03173 DUF619-like DUF619 domain of various N-acetylglutamate Kinases and N-acetylglutamate Synthases. DUF619-like: This family includes the DUF619 domain of various N-acetylglutamate synthases (NAGS) of the urea cycle found in humans and fish, the DUF619 domain of the NAGS of the fungal arginine-biosynthetic pathway (FABP), as well as the DUF619 domain present C-terminal of a NAG kinase-like domain in a limited number of predicted NAGSs found in bacteria and Dictyostelium. Ureogenic NAGS is a mitochondrial enzyme catalyzing the formation of NAG from acetylcoenzyme A and L-glutamate. NAGS is an essential allosteric activator of carbamylphosphate synthase I, the first and rate limiting enzyme of the urea cycle. Domain architecture of ureogenic and fungal NAGS consists of an N-terminal NAG kinase-like domain and a C-terminal DUF619 domain. This subgroup also includes the DUF619 domain of the FABP N-acetylglutamate kinase (NAGK), the enzyme that catalyzes the second reaction of arginine
Probab=75.96 E-value=21 Score=23.93 Aligned_cols=47 Identities=13% Similarity=0.150 Sum_probs=37.6
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHH
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLY 122 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y 122 (211)
..++..++|.+.-++.|++..+.+.+.+. .+.+...+.++|+. .+.|
T Consensus 33 v~~LdkFav~~~~~~~gv~D~vf~~i~~d------~~~L~Wrsr~~n~~-n~Wy 79 (98)
T cd03173 33 IPYLDKFAVSDHLWLNNVTDNIFNLIRKD------FPSLLWRVRENDAN-LKWY 79 (98)
T ss_pred CEEEEEEEEcccccccCHHHHHHHHHHhh------CCeeEEEeCCCCCc-cceE
Confidence 78999999999999999999999877664 33577788888875 3443
No 136
>PRK00756 acyltransferase NodA; Provisional
Probab=75.12 E-value=24 Score=26.16 Aligned_cols=112 Identities=15% Similarity=0.094 Sum_probs=63.7
Q ss_pred CChhhHHHHHHhhhhcCCc--cchhHHHHH--HH-hcCCCeEEEEEecCCcEEEEEEEE----EecCCCceeEEEEEEEE
Q 028270 7 ATVDDLLAMQACNLFCLPE--NYQMKYYFY--HI-LSWPQLLYVAEDYNGRIVGYVLAK----MEEESNECHGHITSLAV 77 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~~--~~~~~~~~~--~~-~~~~~~~~v~~~~~g~ivG~~~~~----~~~~~~~~~~~i~~l~V 77 (211)
++..|--++.++.+..++. .++..-|.- .. -..|+.-.+.++ ..-+++.+.+. .......-.+++...+|
T Consensus 15 L~ladH~eLaeFfr~tYgptGafnakpFeG~RSWAGARPElRaIgyD-~~GVaAH~G~LRRFIkVg~vDlLVaElGLygV 93 (196)
T PRK00756 15 LELSDHAELAEFFRKTYGPTGAFNAKPFEGGRSWAGARPELRAIAYD-SHGVAAHMGLLRRFIKVGEVDLLVAELGLYGV 93 (196)
T ss_pred cccchhHHHHHHHHHhcCCcccccccccCcCcccccCCceeEEEeec-CccHhHhHHHHhhhheecccceeEEEeeeeee
Confidence 4556666777777777643 222211110 00 123444555555 33343333221 11111112678889999
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhh
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k 124 (211)
.|+..|.||+..+ ..+.-.+++ +|+..-.-.|.. +..+-.++
T Consensus 94 RpDLEGlGi~~S~-r~m~PvLq~-LgVPF~FGtVR~---al~~Hv~R 135 (196)
T PRK00756 94 RPDLEGLGIAHSI-RAMYPVLQE-LGVPFAFGTVRH---ALRNHVER 135 (196)
T ss_pred ccccccccchhhH-HHHHHHHHh-cCCCeecccchH---HHHHHHHH
Confidence 9999999998866 677777777 899877777765 44444444
No 137
>PRK02983 lysS lysyl-tRNA synthetase; Provisional
Probab=74.73 E-value=22 Score=34.54 Aligned_cols=66 Identities=15% Similarity=0.117 Sum_probs=50.5
Q ss_pred EEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEec
Q 028270 43 LYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRK 113 (211)
Q Consensus 43 ~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~ 113 (211)
++++.+.+|+|+|++.+.+.... ...+..+--+|+- -.|+...|+-.++.++++ .|++.+.|...+
T Consensus 422 i~~a~d~~G~i~af~s~~p~~~~---g~slDLMRr~pda-pnGvmE~L~~~l~~~~k~-~G~~~~sLg~AP 487 (1094)
T PRK02983 422 LVEAHDADGQVVALLSFVPWGRR---GLSLDLMRRSPDA-PNGVIELMVAELALEAES-LGITRISLNFAV 487 (1094)
T ss_pred EEEEECCCCeEEEEEEEeeeCCC---CEEEEecccCCCC-CCCHHHHHHHHHHHHHHH-cCCCEEEechhh
Confidence 34455657999999999996432 3455555555664 689999999999999999 899999986554
No 138
>PF12261 T_hemolysin: Thermostable hemolysin; InterPro: IPR022050 This family of proteins is found in bacteria. Proteins in this family are typically between 200 and 228 amino acids in length. T_hemolysin is a pore-forming toxin of bacteria, able to lyse erythrocytes from a number of mammalian species.
Probab=71.12 E-value=35 Score=25.58 Aligned_cols=77 Identities=22% Similarity=0.261 Sum_probs=56.5
Q ss_pred EecCCcEEEEEEEEEecCCCc-------------------------eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHh
Q 028270 47 EDYNGRIVGYVLAKMEEESNE-------------------------CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQV 101 (211)
Q Consensus 47 ~~~~g~ivG~~~~~~~~~~~~-------------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~ 101 (211)
.+.+|++++.+.++.-....- ...+|+.++.. +.|.+..|+..+...+..
T Consensus 40 ~~~~g~l~aa~G~r~A~~~~LFlEqYLd~piE~~l~~~~g~~v~R~~IvEvGnLAs~----~~g~~~~l~~~l~~~L~~- 114 (179)
T PF12261_consen 40 RDSDGELVAAAGLRFASQEPLFLEQYLDQPIEQLLSRRFGRPVSRSQIVEVGNLASF----SPGAARLLFAALAQLLAQ- 114 (179)
T ss_pred ccCCCCEEEEEeecccCCCCcchhhhcCCcHHHHHHhhcCCCcchhheeEeechhhc----CcccHHHHHHHHHHHHHH-
Confidence 345889999999888764321 23345555443 689999999999999988
Q ss_pred cCCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 102 FGAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 102 ~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
.|++-+.++... ..+.++.| +|..+..
T Consensus 115 ~g~~w~vfTaT~---~lr~~~~r-lgl~~~~ 141 (179)
T PF12261_consen 115 QGFEWVVFTATR---QLRNLFRR-LGLPPTV 141 (179)
T ss_pred CCCCEEEEeCCH---HHHHHHHH-cCCCcee
Confidence 898866555443 77899999 9998764
No 139
>KOG4387 consensus Ornithine decarboxylase antizyme [Amino acid transport and metabolism]
Probab=68.55 E-value=39 Score=25.26 Aligned_cols=80 Identities=10% Similarity=0.044 Sum_probs=52.5
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHH---HHHHHhhhcCceEeceeeccccCCcceeeeeec
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRA---AFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQ 150 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~---a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~ 150 (211)
.+..-|+-.=-+..++=+-++++.+.+.+.+.++.+.+.+.+.. ..+-+.- +||+++.-.........+.+.|+..
T Consensus 104 l~~~IPdq~l~~gsKe~lvalLEfAEekl~~d~Vfi~F~K~R~dr~~Llrtfsy-vGFEpvrp~HP~~pp~~~~ffM~Y~ 182 (191)
T KOG4387|consen 104 LFFEIPDQALDVGSKEGLVALLEFAEEKLHVDKVFICFDKNREDRAALLRTFSY-VGFEPVRPDHPVVPPRPDVFFMVYP 182 (191)
T ss_pred EEEecCcchhcccchHhHHHHHHHHHHhhccceEEEEEecCccChHhhhhhehc-ceeeecCCCCCCCCCccceEEEEEe
Confidence 33444444445666777778888887778999999988877653 3344455 6888877442222234688999988
Q ss_pred ccCC
Q 028270 151 LKGK 154 (211)
Q Consensus 151 l~~~ 154 (211)
+...
T Consensus 183 ~er~ 186 (191)
T KOG4387|consen 183 LERD 186 (191)
T ss_pred eccc
Confidence 7654
No 140
>PHA02769 hypothetical protein; Provisional
Probab=66.69 E-value=6.4 Score=27.02 Aligned_cols=44 Identities=18% Similarity=0.214 Sum_probs=30.0
Q ss_pred HHHHHHHHHH---HHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 87 ATKLMNAAQS---AMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 87 g~~Ll~~~~~---~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
|..|++.+.. ..+. -|+..+|..-.++.. .++|.+ .||+.++..
T Consensus 94 gd~lvnfl~~l~~k~~~-dg~evlwtlgfpdhs--naly~k-agfk~vg~t 140 (154)
T PHA02769 94 GDHLVNFLNDLAEKLKK-DGFEVLWTLGFPDHS--NALYKK-AGFKLVGQT 140 (154)
T ss_pred hHHHHHHHHHHHHHHhc-CCeEEEEEecCCCcc--hhHHhh-hhhhHhccc
Confidence 4455555443 4444 688878876666663 578999 999999854
No 141
>COG5653 Protein involved in cellulose biosynthesis (CelD) [Cell envelope biogenesis, outer membrane]
Probab=62.99 E-value=75 Score=27.05 Aligned_cols=86 Identities=10% Similarity=-0.055 Sum_probs=61.5
Q ss_pred cCCccchhHHHHHHHhc---CC-CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHH
Q 028270 22 CLPENYQMKYYFYHILS---WP-QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSA 97 (211)
Q Consensus 22 ~~~~~~~~~~~~~~~~~---~~-~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~ 97 (211)
.|...|....+..-... +. ...+.+.. .|++|+......... +.+.....++|++=+--=|..|+..++++
T Consensus 249 lf~~~~t~~fl~dL~~~~~~d~~~rl~gL~~-G~~lvAV~~~lr~~~----t~h~~l~a~dpe~~~~SPG~~lf~d~i~~ 323 (406)
T COG5653 249 LFRAGWTRDFLRDLFTQRAEDGSGRLFGLHA-GGRLVAVHGLLRQGG----TYHAWLGAIDPEFARASPGMLLFLDLIEW 323 (406)
T ss_pred ccccchHHHHHHHHHhccCcCCceEEEEEee-CCEEEEEEeeeccCC----EEEEEeeccCHHHhhcCchHHHHHHHHHH
Confidence 34556655554333222 11 23455555 789999888877665 56666778899999888999999999999
Q ss_pred HHHhcCCcEEEEEEec
Q 028270 98 MEQVFGAEYVSLHVRK 113 (211)
Q Consensus 98 ~~~~~g~~~i~l~v~~ 113 (211)
+.. +|+.++-+.|..
T Consensus 324 ~~~-~g~~~~DfgvG~ 338 (406)
T COG5653 324 ACG-QGLARFDFGVGD 338 (406)
T ss_pred Hhc-CCCeEEeecCCC
Confidence 998 899888777654
No 142
>COG5092 NMT1 N-myristoyl transferase [Lipid metabolism]
Probab=58.44 E-value=52 Score=27.07 Aligned_cols=121 Identities=14% Similarity=0.108 Sum_probs=63.7
Q ss_pred EEeCChhhHHHHHHhhhhcCC-----ccchhHHHHHHHhc-----CC--CeEEEEEecCCcEEEEEEEEEecCCC-----
Q 028270 4 IRKATVDDLLAMQACNLFCLP-----ENYQMKYYFYHILS-----WP--QLLYVAEDYNGRIVGYVLAKMEEESN----- 66 (211)
Q Consensus 4 ir~~~~~D~~~l~~l~~~~~~-----~~~~~~~~~~~~~~-----~~--~~~~v~~~~~g~ivG~~~~~~~~~~~----- 66 (211)
+|++...|.+++.+|..+... ..+..+.+...... +. -+.||+...+|+|-+|..+..-+..-
T Consensus 261 lR~~e~kD~~~v~~L~~~y~~Rfel~~~f~~Eei~h~F~~~~~v~~~~v~~syvVe~p~gkItdFfsFyslp~t~i~n~k 340 (451)
T COG5092 261 LRLAEEKDMEDVARLYLEYSRRFELYEEFRFEEIVHTFRPVKNVVDKQVTYSYVVEEPNGKITDFFSFYSLPFTTIENKK 340 (451)
T ss_pred cchhhhhCHHHHHHHHHHHHHHHHHHHHHhHHHHHhhcccccccccCceEEEEEEeCCCCccccceEEEeccceeecCcc
Confidence 688999999999998655221 11122222111111 11 13466777789999988776543211
Q ss_pred ---ceeEEEEEEEEcCCccccCHHH-----------HHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEe
Q 028270 67 ---ECHGHITSLAVLRTHRKLGLAT-----------KLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIH 131 (211)
Q Consensus 67 ---~~~~~i~~l~V~p~~rg~Gig~-----------~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~ 131 (211)
...+|+...+.+..+.. +.. .|+..++-.++. .|++..-....-+|. -|... ++|-.-
T Consensus 341 ykdiq~gYLYYya~d~~~kd--~~~~a~~a~~~r~~e~v~Da~ilak~-~~~DVFNalt~~dN~---lFL~d-LkFg~G 412 (451)
T COG5092 341 YKDIQGGYLYYYAGDDQFKD--FDPKATKALKTRVAEMVGDAMILAKV-EGCDVFNALTMMDNS---LFLAD-LKFGCG 412 (451)
T ss_pred ccccceeEEEEEccCccccc--cChHHHHHHHHHHHHHHHHHHHHHHH-cCCchhhhhhhccch---hHHHh-cCccCC
Confidence 02455655555543322 322 233333334444 576655444445553 37777 888643
No 143
>COG2898 Uncharacterized conserved protein [Function unknown]
Probab=57.05 E-value=70 Score=28.46 Aligned_cols=64 Identities=14% Similarity=0.057 Sum_probs=48.7
Q ss_pred EEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEe
Q 028270 45 VAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVR 112 (211)
Q Consensus 45 v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~ 112 (211)
.+.+.+|+|+|++.+.+..... ...+..+--+|+-- +|+-..|+-.++.++++ .|+.++.+..-
T Consensus 396 a~~~~~g~VvaFa~l~~~~~~~--~~SlDlMR~sp~ap-~g~mdfLf~~li~~aKe-~G~~~fsLgmA 459 (538)
T COG2898 396 AAVDNEGEVVAFANLMPTGGKE--GYSLDLMRRSPDAP-NGTMDFLFSELILWAKE-EGYQRFSLGMA 459 (538)
T ss_pred eEEcCCCCeEEEEeecccCCcc--eeEEEeeecCCCCC-chHHHHHHHHHHHHHHH-cCCeEEecCCc
Confidence 3344478899999999866543 45566666666654 58999999999999999 89999987543
No 144
>cd09012 Glo_EDI_BRP_like_24 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=55.62 E-value=19 Score=24.43 Aligned_cols=16 Identities=25% Similarity=0.611 Sum_probs=13.7
Q ss_pred HHHHHHHhhhcCceEec
Q 028270 116 RAAFNLYTETLGYKIHD 132 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~ 132 (211)
.+++.||+. +||+...
T Consensus 12 ~~s~~FY~~-lGf~~~~ 27 (124)
T cd09012 12 EKSTAFYTA-LGFEFNP 27 (124)
T ss_pred HHHHHHHHH-CCCEEcc
Confidence 388999999 9999764
No 145
>cd07235 MRD Mitomycin C resistance protein (MRD). Mitomycin C (MC) is a naturally occurring antibiotic, and antitumor agent used in the treatment of cancer. Its antitumor activity is exerted primarily through monofunctional and bifunctional alkylation of DNA. MRD binds to MC and functions as a component of the MC exporting system. MC is bound to MRD by a stacking interaction between a His and a Trp. MRD adopts a structural fold similar to bleomycin resistance protein, glyoxalase I, and extradiol dioxygenases; and it has binding sites at an identical location to binding sites in these evolutionarily related enzymes.
Probab=54.84 E-value=15 Score=24.75 Aligned_cols=24 Identities=21% Similarity=0.551 Sum_probs=17.0
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEec
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+.+.|..- .+|++||++ +||+...
T Consensus 4 i~l~V~D~-~~a~~FY~~-LGf~~~~ 27 (122)
T cd07235 4 VGIVVADM-AKSLDFYRR-LGFDFPE 27 (122)
T ss_pred EEEEeccH-HHHHHHHHH-hCceecC
Confidence 45555433 378999999 9998754
No 146
>PF02100 ODC_AZ: Ornithine decarboxylase antizyme; InterPro: IPR002993 Ornithine decarboxylase antizyme (ODC-AZ) [] binds to, and destabilises, ornithine decarboxylase (ODC), a key enzyme in polyamine synthesis. ODC is then rapidly degraded. The expression of ODC-AZ requires programmed, ribosomal frameshifting which is modulated according to the cellular concentration of polyamines. High levels of polyamines induce a +1 ribosomal frameshift in the translation of mRNA for the antizyme leading to the expression of a full-length protein. At least two forms of ODC-AZ exist in mammals [] and the protein has been found in Drosophila (protein Gutfeeling).; GO: 0004857 enzyme inhibitor activity, 0008073 ornithine decarboxylase inhibitor activity; PDB: 1ZO0_A.
Probab=51.37 E-value=75 Score=21.61 Aligned_cols=53 Identities=13% Similarity=0.157 Sum_probs=24.3
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHH---HHHhhhcCceEec
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAF---NLYTETLGYKIHD 132 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~---~~Y~k~~GF~~~~ 132 (211)
.+...++| -+.-+-++++.|.+.+++..+.+.+..+..... +-+.= +||+++.
T Consensus 31 p~~~~~~~-~K~~lvaLLElAee~L~c~~vvic~~k~~~d~~~Llr~l~~-vGF~lv~ 86 (108)
T PF02100_consen 31 PSSALGQG-SKESLVALLELAEEKLGCSHVVICLDKNRPDRASLLRTLMW-VGFELVT 86 (108)
T ss_dssp SS---SS---SHHHHHHHHHHHHHH----EEEEE---SS-HHHHHHHHTT-T--EEE-
T ss_pred CCcccccc-cHHHHHHHHHHhcCcCCCCEEEEEEECCchhHHHhhhhcEe-eccEecC
Confidence 34444444 566677788888765899999998887765433 34444 5777776
No 147
>PF07395 Mig-14: Mig-14; InterPro: IPR009977 This family contains a number of bacterial mig-14 proteins (approximately 270 residues long). In Salmonella, mig-14 contributes to resistance to antimicrobial peptides, although the mechanism is not fully understood [].
Probab=50.58 E-value=33 Score=27.44 Aligned_cols=60 Identities=17% Similarity=0.000 Sum_probs=42.5
Q ss_pred eEEEEEecCCcEEEEEEEEEecCCCceeEEEE--EEEEcCCccccCHHHHHH----HHHHHHHHHhcCCc
Q 028270 42 LLYVAEDYNGRIVGYVLAKMEEESNECHGHIT--SLAVLRTHRKLGLATKLM----NAAQSAMEQVFGAE 105 (211)
Q Consensus 42 ~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~--~l~V~p~~rg~Gig~~Ll----~~~~~~~~~~~g~~ 105 (211)
...++.. +|++|++=.+....... ..++. .-+++|+++.--.|+-|| +.+.+.+++ .|-.
T Consensus 174 fG~vL~l-~~~P~Aiqlv~k~es~~--wv~~D~iNgG~Dp~~~~~SpGSiL~w~Ni~~A~~~~~~-~~k~ 239 (264)
T PF07395_consen 174 FGSVLFL-NGQPCAIQLVYKVESPK--WVYFDYINGGYDPECRDFSPGSILMWLNIQDAWEYCRA-QGKP 239 (264)
T ss_pred eeeEEEE-CCcceEEEEEEEecCCC--eEEEecccCccCcccccCCCccEEEEeeHHHHHHHHHH-hCCc
Confidence 3456666 99999998887776654 33333 558899999999999886 555556666 4544
No 148
>cd08356 Glo_EDI_BRP_like_17 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=48.77 E-value=16 Score=24.56 Aligned_cols=18 Identities=17% Similarity=0.401 Sum_probs=15.0
Q ss_pred HHHHHHHhhhcCceEecee
Q 028270 116 RAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~~ 134 (211)
.++++||+. +||+.....
T Consensus 13 ~~s~~FY~~-LGf~~~~~~ 30 (113)
T cd08356 13 AESKQFYQA-LGFELEWEN 30 (113)
T ss_pred HHHHHHHHH-hCCeeEecC
Confidence 388999999 999987643
No 149
>PF00571 CBS: CBS domain CBS domain web page. Mutations in the CBS domain of Swiss:P35520 lead to homocystinuria.; InterPro: IPR000644 CBS (cystathionine-beta-synthase) domains are small intracellular modules, mostly found in two or four copies within a protein, that occur in a variety of proteins in bacteria, archaea, and eukaryotes [, ]. Tandem pairs of CBS domains can act as binding domains for adenosine derivatives and may regulate the activity of attached enzymatic or other domains []. In some cases, CBS domains may act as sensors of cellular energy status by being activated by AMP and inhibited by ATP []. In chloride ion channels, the CBS domains have been implicated in intracellular targeting and trafficking, as well as in protein-protein interactions, but results vary with different channels: in the CLC-5 channel, the CBS domain was shown to be required for trafficking [], while in the CLC-1 channel, the CBS domain was shown to be critical for channel function, but not necessary for trafficking []. Recent experiments revealing that CBS domains can bind adenosine-containing ligands such ATP, AMP, or S-adenosylmethionine have led to the hypothesis that CBS domains function as sensors of intracellular metabolites [, ]. Crystallographic studies of CBS domains have shown that pairs of CBS sequences form a globular domain where each CBS unit adopts a beta-alpha-beta-beta-alpha pattern []. Crystal structure of the CBS domains of the AMP-activated protein kinase in complexes with AMP and ATP shows that the phosphate groups of AMP/ATP lie in a surface pocket at the interface of two CBS domains, which is lined with basic residues, many of which are associated with disease-causing mutations []. In humans, mutations in conserved residues within CBS domains cause a variety of human hereditary diseases, including (with the gene mutated in parentheses): homocystinuria (cystathionine beta-synthase); Wolff-Parkinson-White syndrome (gamma 2 subunit of AMP-activated protein kinase); retinitis pigmentosa (IMP dehydrogenase-1); congenital myotonia, idiopathic generalized epilepsy, hypercalciuric nephrolithiasis, and classic Bartter syndrome (CLC chloride channel family members).; GO: 0005515 protein binding; PDB: 3JTF_A 3TE5_C 3TDH_C 3T4N_C 2QLV_C 3OI8_A 3LV9_A 2QH1_B 1PVM_B 3LQN_A ....
Probab=47.10 E-value=35 Score=19.38 Aligned_cols=35 Identities=11% Similarity=0.066 Sum_probs=22.1
Q ss_pred ccchhHHHHHHHhcCCCeEEEEEecCCcEEEEEEE
Q 028270 25 ENYQMKYYFYHILSWPQLLYVAEDYNGRIVGYVLA 59 (211)
Q Consensus 25 ~~~~~~~~~~~~~~~~~~~~v~~~~~g~ivG~~~~ 59 (211)
...+.......+...+...+.+.+++++++|++..
T Consensus 14 ~~~~l~~~~~~~~~~~~~~~~V~d~~~~~~G~is~ 48 (57)
T PF00571_consen 14 PDDSLEEALEIMRKNGISRLPVVDEDGKLVGIISR 48 (57)
T ss_dssp TTSBHHHHHHHHHHHTSSEEEEESTTSBEEEEEEH
T ss_pred CcCcHHHHHHHHHHcCCcEEEEEecCCEEEEEEEH
Confidence 34455555556655555555556558999998753
No 150
>cd08358 Glo_EDI_BRP_like_21 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=46.82 E-value=45 Score=23.33 Aligned_cols=20 Identities=30% Similarity=0.532 Sum_probs=14.6
Q ss_pred cHHHHHHHhhhcCceEecee
Q 028270 115 NRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 115 N~~a~~~Y~k~~GF~~~~~~ 134 (211)
-.++++||++.+||+...+.
T Consensus 13 lerSi~FY~~vLG~~~~~~~ 32 (127)
T cd08358 13 RNKTIKFYREVLGMKVLRHE 32 (127)
T ss_pred HHHHHHHHHHhcCCEEEeee
Confidence 34889999653899976533
No 151
>cd08350 BLMT_like BLMT, a bleomycin resistance protein encoded on the transposon Tn5, and similar proteins. BLMT is a bleomycin (Bm) resistance protein, encoded by the ble gene on the transposon Tn5. This protein confers a survival advantage to Escherichia coli host cells. Bm is a glycopeptide antibiotic produced naturally by actinomycetes. It is a potent anti-cancer drug, which acts as a strong DNA-cutting agent, thereby causing cell death. BLMT has strong binding affinity to Bm and it protects against this lethal compound through drug sequestering. BLMT has two identically-folded subdomains, with the same alpha/beta fold; these two halves have no sequence similarity. BLMT is a dimer with two Bm-binding pockets formed at the dimer interface.
Probab=46.53 E-value=25 Score=23.65 Aligned_cols=19 Identities=26% Similarity=0.459 Sum_probs=15.4
Q ss_pred HHHHHHHhhhcCceEeceee
Q 028270 116 RAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~~~ 135 (211)
.++++||++ +||+......
T Consensus 14 ~~s~~FY~~-lG~~~~~~~~ 32 (120)
T cd08350 14 DATEAFYAR-LGFSVGYRQA 32 (120)
T ss_pred HHHHHHHHH-cCCEEEecCC
Confidence 388999999 9999876443
No 152
>PF00903 Glyoxalase: Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily This Prosite is specific to glyoxalases This Prosite is specific to Extradiol ring-cleavage dioxygenases This prints entry is specific to bleomycin resistance protein.; InterPro: IPR004360 Glyoxalase I (4.4.1.5 from EC) (lactoylglutathione lyase) catalyzes the first step of the glyoxal pathway. S-lactoylglutathione is then converted by glyoxalase II to lactic acid []. Glyoxalase I is an ubiquitous enzyme which binds one mole of zinc per subunit. The bacterial and yeast enzymes are monomeric while the mammalian one is homodimeric. The sequence of glyoxalase I is well conserved. The domain represented by this entry is found in glyoxalase I and in other related proteins, including fosfomycin resistance proteins FosB [], FosA [], FosX [] and dioxygenases (eg. 4-hydroxyphenylpyruvate dioxygenase).; PDB: 1CJX_A 1NPB_E 3OJT_C 3OJN_A 2IG9_B 3OJJ_B 3OJK_D 1Q0C_D 1F1X_C 3BZA_B ....
Probab=45.97 E-value=20 Score=23.87 Aligned_cols=29 Identities=21% Similarity=0.586 Sum_probs=21.3
Q ss_pred EEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 106 YVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 106 ~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
-+.+.|..-+ +++.||++.+||+......
T Consensus 4 Hi~i~v~d~~-~~~~FY~~~lG~~~~~~~~ 32 (128)
T PF00903_consen 4 HIAIRVKDLE-KAIDFYTDVLGFRLVEESD 32 (128)
T ss_dssp EEEEEESCHH-HHHHHHHHTTTSEEEEEEE
T ss_pred EEEEEcCCHH-HHHHHHHHHhCCcEEeeec
Confidence 3444444333 7899999989999998766
No 153
>TIGR02990 ectoine_eutA ectoine utilization protein EutA. Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti and Silicibacter pomeroyi. It is missing from two other species with the other ectoine transport and utilization genes: Pseudomonas putida and Agrobacterium tumefaciens.
Probab=45.48 E-value=31 Score=27.11 Aligned_cols=44 Identities=18% Similarity=0.328 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHhcCCcEEEEEE---ecCcHHHHHHHhhhcCceEece
Q 028270 88 TKLMNAAQSAMEQVFGAEYVSLHV---RKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 88 ~~Ll~~~~~~~~~~~g~~~i~l~v---~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
..-..++++-+++ +|+++|.+.+ ..-|.....||+. .||++...
T Consensus 105 tt~~~A~~~AL~a-lg~~RIalvTPY~~~v~~~~~~~l~~-~G~eV~~~ 151 (239)
T TIGR02990 105 VTPSSAAVDGLAA-LGVRRISLLTPYTPETSRPMAQYFAV-RGFEIVNF 151 (239)
T ss_pred eCHHHHHHHHHHH-cCCCEEEEECCCcHHHHHHHHHHHHh-CCcEEeee
Confidence 3345566666677 8999999854 3557788999999 99998874
No 154
>cd08353 Glo_EDI_BRP_like_7 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=45.32 E-value=21 Score=24.81 Aligned_cols=29 Identities=28% Similarity=0.450 Sum_probs=20.2
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+++.+.+.|..- .++++||++ +||+....
T Consensus 3 ~i~Hi~i~v~Dl-~~s~~FY~~-LG~~~~~~ 31 (142)
T cd08353 3 RMDNVGIVVRDL-EAAIAFFLE-LGLELEGR 31 (142)
T ss_pred eeeeEEEEeCCH-HHHHHHHHH-cCCEEccc
Confidence 344556665543 378999999 99987654
No 155
>COG3473 Maleate cis-trans isomerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=45.06 E-value=40 Score=26.06 Aligned_cols=39 Identities=21% Similarity=0.430 Sum_probs=30.0
Q ss_pred HHHHHHHhcCCcEEEEE---EecCcHHHHHHHhhhcCceEecee
Q 028270 94 AQSAMEQVFGAEYVSLH---VRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 94 ~~~~~~~~~g~~~i~l~---v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+++-++. +|++++.+. ..+-|.+...|++. .||.++...
T Consensus 109 vv~aL~a-l~a~ri~vlTPY~~evn~~e~ef~~~-~Gfeiv~~~ 150 (238)
T COG3473 109 VVEALNA-LGAQRISVLTPYIDEVNQREIEFLEA-NGFEIVDFK 150 (238)
T ss_pred HHHHHHh-hCcceEEEeccchhhhhhHHHHHHHh-CCeEEEEee
Confidence 4445555 788888874 35778899999999 999988743
No 156
>PF13380 CoA_binding_2: CoA binding domain; PDB: 3FF4_A 2D5A_A 2D59_A 2E6U_X 1IUL_A 1IUK_A 1Y81_A 2DUW_A.
Probab=44.58 E-value=48 Score=22.71 Aligned_cols=87 Identities=14% Similarity=0.121 Sum_probs=48.2
Q ss_pred HHHhcCCCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEec
Q 028270 34 YHILSWPQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRK 113 (211)
Q Consensus 34 ~~~~~~~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~ 113 (211)
..+.......|.+.-..+++-|.-++....+... ..-+-.+++ ....+..+++.+.+ .|++.+++....
T Consensus 21 ~~l~~~G~~v~~Vnp~~~~i~G~~~y~sl~e~p~-~iDlavv~~---------~~~~~~~~v~~~~~-~g~~~v~~~~g~ 89 (116)
T PF13380_consen 21 RNLKAAGYEVYPVNPKGGEILGIKCYPSLAEIPE-PIDLAVVCV---------PPDKVPEIVDEAAA-LGVKAVWLQPGA 89 (116)
T ss_dssp HHHHHTT-EEEEESTTCSEETTEE-BSSGGGCSS-T-SEEEE-S----------HHHHHHHHHHHHH-HT-SEEEE-TTS
T ss_pred HHHHhCCCEEEEECCCceEECcEEeeccccCCCC-CCCEEEEEc---------CHHHHHHHHHHHHH-cCCCEEEEEcch
Confidence 3343433345544443456666554443332111 222333333 34456677777777 799999999999
Q ss_pred CcHHHHHHHhhhcCceEec
Q 028270 114 SNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 114 ~N~~a~~~Y~k~~GF~~~~ 132 (211)
.+..+.++-++ .|.+..+
T Consensus 90 ~~~~~~~~a~~-~gi~vig 107 (116)
T PF13380_consen 90 ESEELIEAARE-AGIRVIG 107 (116)
T ss_dssp --HHHHHHHHH-TT-EEEE
T ss_pred HHHHHHHHHHH-cCCEEEe
Confidence 99999999999 9999886
No 157
>COG2994 HlyC ACP:hemolysin acyltransferase (hemolysin-activating protein) [Posttranslational modification, protein turnover, chaperones]
Probab=41.06 E-value=1.3e+02 Score=21.59 Aligned_cols=40 Identities=18% Similarity=0.170 Sum_probs=25.1
Q ss_pred cchhHHHHHHHhc--CCCeEEEEEecCCcEEEEEEEEEecCC
Q 028270 26 NYQMKYYFYHILS--WPQLLYVAEDYNGRIVGYVLAKMEEES 65 (211)
Q Consensus 26 ~~~~~~~~~~~~~--~~~~~~v~~~~~g~ivG~~~~~~~~~~ 65 (211)
.|....+...++. ..+.|-+..+++|++||||+|-..++.
T Consensus 35 ~~pV~e~~~~iLPalk~~Qf~ly~de~g~Piaf~~WA~vde~ 76 (148)
T COG2994 35 HYPVAEISRNILPALKLGQFALYFDEHGRPIAFCTWAFVDEQ 76 (148)
T ss_pred hccHHHHHHHHhHHHhcCceEEEEcCCCCeeEEEEEeecCHH
Confidence 4555556565553 223344444469999999999876544
No 158
>COG3543 Uncharacterized conserved protein [Function unknown]
Probab=40.71 E-value=42 Score=23.67 Aligned_cols=42 Identities=12% Similarity=0.165 Sum_probs=29.2
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCc
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSN 115 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N 115 (211)
.+....-|||+||...+.+.+-..+........|.+...+++
T Consensus 9 HLlCmq~y~GkGYS~~FveN~d~I~~rL~~ge~i~lV~g~DD 50 (135)
T COG3543 9 HLLCMQGYQGKGYSPAFVENYDAIAERLKAGEDIKLVDGPDD 50 (135)
T ss_pred hhheeeecccccCCHHHHHHHHHHHHHhhcCCCeEEEecccc
Confidence 344557899999999999888777765333444666665554
No 159
>PF08901 DUF1847: Protein of unknown function (DUF1847); InterPro: IPR014997 This group of proteins are functionally uncharacterised. They contain 4 N-terminal cysteines that may form a zinc-binding domain.
Probab=38.90 E-value=49 Score=24.19 Aligned_cols=42 Identities=14% Similarity=0.270 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhcCCcEEEEEE----ecCcHHHHHHHhhhcCceEecee
Q 028270 91 MNAAQSAMEQVFGAEYVSLHV----RKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 91 l~~~~~~~~~~~g~~~i~l~v----~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
++.+++.+++ +|+++|.+.. ...-....++++. .||.+.+..
T Consensus 43 veEiieFak~-mgykkiGiAfCiGL~~EA~~~~~iL~~-~gFev~sV~ 88 (157)
T PF08901_consen 43 VEEIIEFAKR-MGYKKIGIAFCIGLRKEARILAKILEA-NGFEVYSVC 88 (157)
T ss_pred HHHHHHHHHH-cCCCeeeehhhHhHHHHHHHHHHHHHH-CCCEEEEEE
Confidence 5778888988 8999998622 2223344567888 999988743
No 160
>PF04816 DUF633: Family of unknown function (DUF633) ; InterPro: IPR006901 This is a family of uncharacterised bacterial proteins.; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity; PDB: 3LEC_A 3KU1_G 3KR9_A 3GNL_B.
Probab=38.86 E-value=54 Score=25.10 Aligned_cols=50 Identities=18% Similarity=0.160 Sum_probs=34.3
Q ss_pred CHHHHHHHHHHHHHHHh-cCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 85 GLATKLMNAAQSAMEQV-FGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 85 Gig~~Ll~~~~~~~~~~-~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
|+|..++..+++..... .+..++.|.........+++... +||....+.-
T Consensus 74 GMGG~lI~~ILe~~~~~~~~~~~lILqP~~~~~~LR~~L~~-~gf~I~~E~l 124 (205)
T PF04816_consen 74 GMGGELIIEILEAGPEKLSSAKRLILQPNTHAYELRRWLYE-NGFEIIDEDL 124 (205)
T ss_dssp EE-HHHHHHHHHHTGGGGTT--EEEEEESS-HHHHHHHHHH-TTEEEEEEEE
T ss_pred cCCHHHHHHHHHhhHHHhccCCeEEEeCCCChHHHHHHHHH-CCCEEEEeEE
Confidence 88999999999987542 24556777666656577777777 9999888543
No 161
>COG4353 Uncharacterized conserved protein [Function unknown]
Probab=38.59 E-value=1.6e+02 Score=21.73 Aligned_cols=71 Identities=13% Similarity=0.064 Sum_probs=51.1
Q ss_pred EecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHH
Q 028270 47 EDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLY 122 (211)
Q Consensus 47 ~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y 122 (211)
..++|+.+|-+.+....+.. ..|+..+.|.|-++|.-+-.+|+..+.+.+ .....++++-..++..-.+++
T Consensus 34 ~Le~ge~l~~l~vF~GR~yy--tPW~Eifnv~Pv~~gs~~E~~l~~~l~~~l---spg~~lfVeYv~DrET~~~lq 104 (192)
T COG4353 34 LLENGEQLGKLKVFKGRDYY--TPWLEIFNVNPVFRGSELEVKLYKVLYNFL---SPGGKLFVEYVRDRETRYRLQ 104 (192)
T ss_pred eecCCceeeEEEEEcCCccc--cchhhccccCCccCCCHHHHHHHHHHHHhc---CCCCceEEEEEechhHHHHHH
Confidence 33468888887765544433 678888889999999999999999888876 234457776666666656554
No 162
>cd04263 DUF619-NAGK-FABP DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway. DUF619-NAGK-FABP: DUF619 domain of N-acetylglutamate kinase (NAGK) of the fungal arginine-biosynthetic pathway (FABP). The nuclear-encoded, mitochondrial polyprotein precursor (ARG5,6) consists of an N-terminal NAGK (ArgB) domain, a central DUF619 domain, and a C-terminal reductase domain (ArgC, N-Acetylglutamate Phosphate Reductase, NAGPR). The precursor is cleaved into two distinct enzymes (NAGK-DUF619 and NAGPR) in the mitochondria. Native molecular weights of these proteins indicate that the kinase is an octamer whereas the reductase is a dimer. Arg5,6 catalyzes the second reaction of arginine biosynthesis; the phosphorylation of the gamma-carboxyl group of NAG to produce N-acetylglutamylphosphate (NAGP) which is subsequently converted to ornithine in two more steps. It also binds and regulates the promoters of nuclear and mitochondrial genes, and may possibly regu
Probab=38.21 E-value=1.2e+02 Score=20.26 Aligned_cols=43 Identities=9% Similarity=0.198 Sum_probs=34.6
Q ss_pred eEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHH
Q 028270 69 HGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRA 117 (211)
Q Consensus 69 ~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~ 117 (211)
..++..+.|...-++.|++..+.+.+.+. ..+++..+.++|+.
T Consensus 33 vp~LdkF~vs~~~~l~~vaD~Vf~~i~~d------~p~L~W~~r~~n~~ 75 (98)
T cd04263 33 VATLATFTITKSGWLNNVADNIFTAIKKD------HPKLVWTVREDDEN 75 (98)
T ss_pred CEEEEEEEEccccccccHHHHHHHHHHhh------CCeeEEEeCCCCCc
Confidence 78999999999999999999888876654 23577788888864
No 163
>PRK15312 antimicrobial resistance protein Mig-14; Provisional
Probab=37.70 E-value=81 Score=25.68 Aligned_cols=60 Identities=13% Similarity=0.015 Sum_probs=41.3
Q ss_pred eEEEEEecCCcEEEEEEEEEecCCCceeEEE--EEEEEcCCccccCHHHHHH----HHHHHHHHHhcCCc
Q 028270 42 LLYVAEDYNGRIVGYVLAKMEEESNECHGHI--TSLAVLRTHRKLGLATKLM----NAAQSAMEQVFGAE 105 (211)
Q Consensus 42 ~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i--~~l~V~p~~rg~Gig~~Ll----~~~~~~~~~~~g~~ 105 (211)
...|+.. +|+++|+=.+....... ..++ ..-+++|+++..-.|+-|| +.+.+.+++ .+-+
T Consensus 204 fG~VLfl-~~~PcA~qlv~k~eSp~--wi~~D~iNgG~Dpe~~~~spGSIL~WlNi~~A~~~~~~-~~K~ 269 (298)
T PRK15312 204 FGHILYI-EGIPCAFDIVLKSESQM--NVYFDVPNGAVKNECMPLSPGSILMWLNISRARHYCQE-RQKK 269 (298)
T ss_pred eeeEEEE-CCcceEEEEEEEecCCC--cEEEecccCccCcccccCCCccEEEEecHHHHHHHHHh-cCCc
Confidence 3456666 99999998887766643 2333 3558999999999999885 555555555 3433
No 164
>KOG0207 consensus Cation transport ATPase [Inorganic ion transport and metabolism]
Probab=36.98 E-value=3.8e+02 Score=25.76 Aligned_cols=65 Identities=17% Similarity=0.213 Sum_probs=41.4
Q ss_pred CCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHH
Q 028270 40 PQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAF 119 (211)
Q Consensus 40 ~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~ 119 (211)
.....++.. +|+++|++.+...-... ...++..+++ +|++ +++.+..++.+|.
T Consensus 702 g~tvv~v~v-n~~l~gv~~l~D~vr~~------------------------a~~av~~Lk~-~Gi~-v~mLTGDn~~aA~ 754 (951)
T KOG0207|consen 702 GQTVVYVAV-NGQLVGVFALEDQVRPD------------------------AALAVAELKS-MGIK-VVMLTGDNDAAAR 754 (951)
T ss_pred CceEEEEEE-CCEEEEEEEeccccchh------------------------HHHHHHHHHh-cCce-EEEEcCCCHHHHH
Confidence 344444444 89999988776644321 1344556666 7876 5555566666888
Q ss_pred HHHhhhcCceEec
Q 028270 120 NLYTETLGYKIHD 132 (211)
Q Consensus 120 ~~Y~k~~GF~~~~ 132 (211)
++.++ +|+..+.
T Consensus 755 svA~~-VGi~~V~ 766 (951)
T KOG0207|consen 755 SVAQQ-VGIDNVY 766 (951)
T ss_pred HHHHh-hCcceEE
Confidence 89999 9966543
No 165
>cd08352 Glo_EDI_BRP_like_1 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=36.60 E-value=43 Score=22.17 Aligned_cols=29 Identities=24% Similarity=0.449 Sum_probs=20.8
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
++..+.+.|.. =.+++.||.+.+||+...
T Consensus 3 ~~~hi~l~v~d-~~~a~~fy~~~lG~~~~~ 31 (125)
T cd08352 3 GIHHVAIICSD-YEKSKEFYVEILGFKVIR 31 (125)
T ss_pred ccceEEEEcCC-HHHHHHHHHHhcCCEEee
Confidence 55667777653 337899998659999765
No 166
>cd08346 PcpA_N_like N-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The N-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=36.49 E-value=49 Score=21.93 Aligned_cols=28 Identities=25% Similarity=0.496 Sum_probs=18.5
Q ss_pred EEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 106 YVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 106 ~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
-+.+.|.. =..+++||++.+||+.....
T Consensus 4 hv~l~v~d-~~~a~~FY~~~lG~~~~~~~ 31 (126)
T cd08346 4 HVTLITRD-AQETVDFYTDVLGLRLVKKT 31 (126)
T ss_pred cEEEEcCC-hhHhHHHHHHccCCEEeeeE
Confidence 34554433 23789999875899987643
No 167
>COG2348 Peptidoglycan interpeptide bridge formation enzyme [Cell wall/membrane/envelope biogenesis]
Probab=36.25 E-value=2.8e+02 Score=23.91 Aligned_cols=106 Identities=15% Similarity=0.092 Sum_probs=61.7
Q ss_pred CeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEE-cC--CccccCHHHHHHHHHHHHHHHhcCCcEEEEE-------
Q 028270 41 QLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAV-LR--THRKLGLATKLMNAAQSAMEQVFGAEYVSLH------- 110 (211)
Q Consensus 41 ~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V-~p--~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~------- 110 (211)
..++.+.. +++.++.+++....... .....+.- .| +|=++.+-..++..+..++++ .++-.|.+.
T Consensus 40 ~~~~~v~~-~~~~v~aa~ll~k~~~~---~~~~~~~prGPv~dy~~~~l~~~~~k~l~~y~k~-~~~l~i~idP~l~~~~ 114 (418)
T COG2348 40 AHLIGVKK-DGNAVIAASLLSKKLPL---GFYTYYIPRGPVMDYSNQELLDYFIKELKKYAKS-KRALFIKIDPYLVYQQ 114 (418)
T ss_pred ceeEEEEe-cCceeeeeeeeeeeccC---CceEEEecCCCcccccchHHHHHHHHHHHHHHhh-ccceEEEeccchhhhc
Confidence 34455555 66555555444433321 22222222 45 888888888888888888876 333222211
Q ss_pred --------EecCcHHHHHHHhhhcCceEeceeeccccCCcceeeeeeccc
Q 028270 111 --------VRKSNRAAFNLYTETLGYKIHDVEAKYYADGEDAYDMRKQLK 152 (211)
Q Consensus 111 --------v~~~N~~a~~~Y~k~~GF~~~~~~~~~~~~~~d~~~m~k~l~ 152 (211)
....|...++.+.. +||+..+....+-......+....++.
T Consensus 115 ~~~~~~~~~~~~n~~~i~~l~~-lG~k~~g~t~~~~~~iqp~~~~~ldl~ 163 (418)
T COG2348 115 FDLGGEIIENYNNLAIIKLLKD-LGYKHSGFTKGLDDSIQPRWHSVLDLK 163 (418)
T ss_pred ccCCCccccCcchHHHHHHHHH-hhhhhcCcccccCcccccchhhhcccc
Confidence 11557889999999 999999877765543333333333333
No 168
>cd08347 PcpA_C_like C-terminal domain of Sphingobium chlorophenolicum 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. The C-terminal domain of Sphingobium chlorophenolicum (formerly Sphingomonas chlorophenolica) 2,6-dichloro-p-hydroquinone 1,2-dioxygenase (PcpA), and similar proteins. PcpA is a key enzyme in the pentachlorophenol (PCP) degradation pathway, catalyzing the conversion of 2,6-dichloro-p-hydroquinone to 2-chloromaleylacetate. This domain belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases.
Probab=35.09 E-value=46 Score=24.02 Aligned_cols=30 Identities=30% Similarity=0.404 Sum_probs=19.8
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+..|.+.|..- .++.+||++.+||+.....
T Consensus 2 l~HI~i~V~Dl-e~s~~FY~~~LG~~~~~~~ 31 (157)
T cd08347 2 LHGVTLTVRDP-EATAAFLTDVLGFREVGEE 31 (157)
T ss_pred cccEEEEeCCH-HHHHHHHHHhcCCEEEeee
Confidence 34455555433 3789999875799987654
No 169
>cd07246 Glo_EDI_BRP_like_8 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=34.59 E-value=79 Score=20.82 Aligned_cols=21 Identities=19% Similarity=0.335 Sum_probs=15.9
Q ss_pred CcHHHHHHHhhhcCceEecee
Q 028270 114 SNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 114 ~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+-.++.+||.+.+||+.....
T Consensus 11 d~~~a~~FY~~~lG~~~~~~~ 31 (122)
T cd07246 11 DAAAAIDFYKKAFGAEELERM 31 (122)
T ss_pred CHHHHHHHHHHhhCCEEEEEE
Confidence 344889999865899987644
No 170
>cd07265 2_3_CTD_N N-terminal domain of catechol 2,3-dioxygenase. This subfamily contains the N-terminal, non-catalytic, domain of catechol 2,3-dioxygenase. Catechol 2,3-dioxygenase (2,3-CTD, catechol:oxygen 2,3-oxidoreductase) catalyzes an extradiol cleavage of catechol to form 2-hydroxymuconate semialdehyde with the insertion of two atoms of oxygen. The enzyme is a homotetramer and contains catalytically essential Fe(II) . The reaction proceeds by an ordered bi-unit mechanism. First, catechol binds to the enzyme, this is then followed by the binding of dioxygen to form a tertiary complex, and then the aromatic ring is cleaved to produce 2-hydroxymuconate semialdehyde. Catechol 2,3-dioxygenase belongs to the type I extradiol dioxygenase family. The subunit comprises the N- and C-terminal domains of similar structure fold, resulting from an ancient gene duplication. The active site is located in a funnel-shaped space of the C-terminal domain. This subfamily represents the N-terminal do
Probab=34.15 E-value=43 Score=22.46 Aligned_cols=29 Identities=28% Similarity=0.272 Sum_probs=19.5
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+..+.+.|..- .++.+||++.+||+....
T Consensus 5 l~hv~l~v~Dl-~~s~~FY~~~lG~~~~~~ 33 (122)
T cd07265 5 PGHVQLRVLDL-EEAIKHYREVLGLDEVGR 33 (122)
T ss_pred EeEEEEEeCCH-HHHHHHHHhccCCEeeee
Confidence 34455555432 378999987699997664
No 171
>PHA00771 head assembly protein
Probab=33.24 E-value=1.8e+02 Score=20.61 Aligned_cols=85 Identities=14% Similarity=0.041 Sum_probs=50.8
Q ss_pred CCcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCce
Q 028270 50 NGRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYK 129 (211)
Q Consensus 50 ~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~ 129 (211)
.|.--|.+.+.....- ...+ .-.-+|++||+-- +.-....+|+.+...+..+...+...-+-.+-+.+= +|.+
T Consensus 46 ~~~yeGivl~~eV~p~---~~ec-Ha~y~P~fRG~ya--~~~r~F~kwlL~Nt~f~~vit~vp~kt~~G~vic~l-ig~r 118 (151)
T PHA00771 46 HGQFGGIVYYNEIQPL---TFDC-HAMYLPEIRGFSK--EIGLAFWRYILTNTTVQCVTSFAARKFRHGQMYCAM-IGLK 118 (151)
T ss_pred cceeeeEEEEEEeeeE---EEEE-EeeeCccccchhH--HHHHHHHHHHhcCCceeEEEEecccccccchhhhhh-hCCc
Confidence 5555555553332221 2222 3345899998743 666666777766566665555555444443444555 7999
Q ss_pred EeceeeccccCC
Q 028270 130 IHDVEAKYYADG 141 (211)
Q Consensus 130 ~~~~~~~~~~~~ 141 (211)
.++..+.++...
T Consensus 119 RVG~id~a~~g~ 130 (151)
T PHA00771 119 RVGTIKKYFKGV 130 (151)
T ss_pred eeeeHHHHhcCC
Confidence 999999988544
No 172
>COG2266 GTP:adenosylcobinamide-phosphate guanylyltransferase [Coenzyme metabolism]
Probab=32.71 E-value=1.1e+02 Score=22.89 Aligned_cols=47 Identities=9% Similarity=0.191 Sum_probs=39.4
Q ss_pred HHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 87 ATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 87 g~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
|+.|+.++++.+.+ .+..+++.++++-+....+.++ .|++.......
T Consensus 26 GkpLI~~v~~al~~--~~d~i~v~isp~tp~t~~~~~~-~gv~vi~tpG~ 72 (177)
T COG2266 26 GKPLIDRVLEALRK--IVDEIIVAISPHTPKTKEYLES-VGVKVIETPGE 72 (177)
T ss_pred CccHHHHHHHHHHh--hcCcEEEEeCCCCHhHHHHHHh-cCceEEEcCCC
Confidence 67899999998865 7889999999999888888888 99888875544
No 173
>COG3146 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=32.23 E-value=2.7e+02 Score=23.32 Aligned_cols=115 Identities=12% Similarity=0.019 Sum_probs=63.7
Q ss_pred CChhhHHHHHHhhhhcCCc----cchhHHHHHHHhc-C-CCeEEEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCC
Q 028270 7 ATVDDLLAMQACNLFCLPE----NYQMKYYFYHILS-W-PQLLYVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRT 80 (211)
Q Consensus 7 ~~~~D~~~l~~l~~~~~~~----~~~~~~~~~~~~~-~-~~~~~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~ 80 (211)
+++..++.+..+....+.. ||-...|+..+-. . ....+|....+|++||.+......+ ..|=-.++...+
T Consensus 225 lte~~wd~f~~fY~dT~~~~wg~pYLtr~Ff~~lge~m~~~vllv~A~r~g~~iaga~~lig~d----~LYGR~WG~ied 300 (387)
T COG3146 225 LTEAIWDAFFAFYMDTGSRKWGRPYLTRPFFSLLGERMADDVLLVMAKRGGRPIAGAFNLIGGD----TLYGRYWGCIED 300 (387)
T ss_pred CCHHHHHHHHHHHHhhcccccCCchhhHHHHHHHHHhhhhhEEEEEeccCCccceEEEEeecCc----eecccccccccc
Confidence 5677788888887776544 4444444444332 1 2344444444899988877766554 233223333333
Q ss_pred ccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 81 HRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 81 ~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+-...+- ...-..++++.+ .|++++.....-..+. . -||.++...
T Consensus 301 ~p~LHFE-~CYyQ~Id~aI~-~gl~~feaGAqGeHKl------a-RGf~pv~~~ 345 (387)
T COG3146 301 HPFLHFE-VCYYQAIDFAIA-EGLQRFEAGAQGEHKL------A-RGFPPVATY 345 (387)
T ss_pred CCcchhH-HHHhhHHHHHHH-hCCceecCCCCcchhh------h-cCCCcccch
Confidence 3333322 234556777777 6888776554433321 2 578877643
No 174
>cd07233 Glyoxalase_I Glyoxalase I catalyzes the isomerization of the hemithioacetal, formed by a 2-oxoaldehyde and glutathione, to S-D-lactoylglutathione. Glyoxalase I (also known as lactoylglutathione lyase; EC 4.4.1.5) is part of the glyoxalase system, a two-step system for detoxifying methylglyoxal, a side product of glycolysis. This system is responsible for the conversion of reactive, acyclic alpha-oxoaldehydes into the corresponding alpha-hydroxyacids and involves 2 enzymes, glyoxalase I and II. Glyoxalase I catalyses an intramolecular redox reaction of the hemithioacetal (formed from methylglyoxal and glutathione) to form the thioester, S-D-lactoylglutathione. This reaction involves the transfer of two hydrogen atoms from C1 to C2 of the methylglyoxal, and proceeds via an ene-diol intermediate. Glyoxalase I has a requirement for bound metal ions for catalysis. Eukaryotic glyoxalase I prefers the divalent cation zinc as cofactor, whereas Escherichia coil and other prokaryotic gly
Probab=30.93 E-value=85 Score=20.65 Aligned_cols=26 Identities=27% Similarity=0.505 Sum_probs=17.6
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEece
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+.+.+.. =.++.+||++.+||+....
T Consensus 4 v~i~v~d-~~~a~~fY~~~lG~~~~~~ 29 (121)
T cd07233 4 TMLRVKD-LEKSLDFYTDVLGMKLLRR 29 (121)
T ss_pred EEEEecC-cHHHHHHHHhccCCeEEEE
Confidence 4444433 3378999988579998764
No 175
>cd07264 Glo_EDI_BRP_like_15 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=30.83 E-value=71 Score=21.24 Aligned_cols=16 Identities=13% Similarity=0.467 Sum_probs=13.5
Q ss_pred HHHHHHhhhcCceEec
Q 028270 117 AAFNLYTETLGYKIHD 132 (211)
Q Consensus 117 ~a~~~Y~k~~GF~~~~ 132 (211)
++.+||++.+||+...
T Consensus 13 ~s~~FY~~~lG~~~~~ 28 (125)
T cd07264 13 KTLEFYERAFGFERRF 28 (125)
T ss_pred HHHHHHHHhhCCeEEe
Confidence 7899999878998754
No 176
>PF00925 GTP_cyclohydro2: GTP cyclohydrolase II; InterPro: IPR000926 GTP cyclohydrolase II catalyses the first committed step in the biosynthesis of riboflavin. The enzyme converts GTP and water to formate, 2,5-diamino-6-hydroxy-4-(5-phosphoribosylamino)- pyrimidine and pyrophosphate, and requires magnesium as a cofactor. It is sometimes found as a bifunctional enzyme with 3,4-dihydroxy-2-butanone 4-phosphate synthase (DHBP_synthase) IPR000422 from INTERPRO. ; GO: 0003935 GTP cyclohydrolase II activity, 0009231 riboflavin biosynthetic process; PDB: 2BZ0_B 2BZ1_A.
Probab=30.21 E-value=1.1e+02 Score=22.57 Aligned_cols=46 Identities=13% Similarity=0.327 Sum_probs=25.6
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
.+++|..|+|.++|. . +|++++.|. .+|+.-+.-.+. +|-++++..
T Consensus 122 ~~d~R~ygigaqIL~-------d-LGV~~~rLL--tnnp~k~~~L~g-~gleV~~~v 167 (169)
T PF00925_consen 122 PEDLRDYGIGAQILR-------D-LGVKKMRLL--TNNPRKYVALEG-FGLEVVERV 167 (169)
T ss_dssp -S----THHHHHHHH-------H-TT--SEEEE---S-HHHHHHHHH-TT--EEEEE
T ss_pred ccccccHHHHHHHHH-------H-cCCCEEEEC--CCChhHHHHHhc-CCCEEEEEe
Confidence 467788888887765 3 799988876 446666777888 888877754
No 177
>PF12652 CotJB: CotJB protein; InterPro: IPR024207 The cotJ operon proteins affect spore coat composition, and is controlled by sigma E. The genes, which include CotJB, are either required for the normal formation of the inner layers of the coat or are themselves structural components of the coat []. CotJB has been identified as a spore coat protein [].
Probab=29.73 E-value=29 Score=22.18 Aligned_cols=35 Identities=20% Similarity=0.303 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhh
Q 028270 89 KLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTE 124 (211)
Q Consensus 89 ~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k 124 (211)
+||..+...-+...-+ .++|.+.+.+..|+..|.+
T Consensus 3 ~LL~~I~~~~Fa~~dl-~LyLDTHP~d~~Al~~y~~ 37 (78)
T PF12652_consen 3 ELLREIQEVSFAVVDL-NLYLDTHPDDQEALEYYNE 37 (78)
T ss_pred HHHHHHHHHhhHHHHH-HHHhcCCCCcHHHHHHHHH
Confidence 4666666655442222 3789999999999999988
No 178
>PF06557 DUF1122: Protein of unknown function (DUF1122); InterPro: IPR008304 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.; PDB: 2ARH_C.
Probab=29.73 E-value=2.3e+02 Score=20.96 Aligned_cols=82 Identities=10% Similarity=-0.010 Sum_probs=47.2
Q ss_pred EEEEecCCcEEEEEEEEEecCCCceeEEEEEEEEcCCcc----ccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHH
Q 028270 44 YVAEDYNGRIVGYVLAKMEEESNECHGHITSLAVLRTHR----KLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAF 119 (211)
Q Consensus 44 ~v~~~~~g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~r----g~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~ 119 (211)
+.+.. +++.++.+-+......- ..|+..+-+.|.++ +.++-..|+..+..++. .-.+++++-..+.....
T Consensus 21 ~~l~~-~~~~l~~~kvF~GR~yY--~pW~EiFni~p~~~~~~~~s~~E~~l~~~~~~~l~---pg~~lfVeY~~D~eT~~ 94 (170)
T PF06557_consen 21 FELYL-GGRHLCHVKVFFGRPYY--RPWAEIFNINPWLRVVFFGSPLEDELYKLFSRYLE---PGGRLFVEYVEDRETRR 94 (170)
T ss_dssp EEEEE-TTEEEEEEEEE--BTTB----EEEEE---GGGHHHHTTSHHHHHHHHHHHTT-------SEEEEE-TT-HHHHH
T ss_pred EEEEE-CCeeEEEEEEecCCCCC--cchheeecccchhcccccCChHHHHHHHHHHHHhh---hcCeEEEEEecCHHHHH
Confidence 33344 78899998777665533 67888889999999 99999999988887763 33457766554444333
Q ss_pred --------------HHHhhhcCceEec
Q 028270 120 --------------NLYTETLGYKIHD 132 (211)
Q Consensus 120 --------------~~Y~k~~GF~~~~ 132 (211)
....+ +||+...
T Consensus 95 ~L~~G~pp~~TrLG~~Ll~-~GFtwfK 120 (170)
T PF06557_consen 95 QLQRGVPPAETRLGFSLLK-AGFTWFK 120 (170)
T ss_dssp HHHTT--GGGSHHHHHHHT-TT--EEE
T ss_pred HHHcCCCcccchhHHHHHh-CCcEEEe
Confidence 34567 8887665
No 179
>cd08355 Glo_EDI_BRP_like_14 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=29.71 E-value=79 Score=21.04 Aligned_cols=21 Identities=24% Similarity=0.366 Sum_probs=15.9
Q ss_pred CcHHHHHHHhhhcCceEecee
Q 028270 114 SNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 114 ~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+=.++..||++.+||+.....
T Consensus 9 d~~~a~~FY~~~lG~~~~~~~ 29 (122)
T cd08355 9 DAAAAIDWLTDAFGFEERLVV 29 (122)
T ss_pred CHHHHHHHHHHhcCCEEEEEE
Confidence 344889999955999987643
No 180
>TIGR03645 glyox_marine lactoylglutathione lyase family protein. Members of this protein family share homology with lactoylglutathione lyase (glyoxalase I) and are found mainly in marine members of the gammaproteobacteria, including CPS_0532 from Colwellia psychrerythraea 34H. This family excludes a well-separated, more narrowly distributed paralogous family, exemplified by CPS_3492 from C. psychrerythraea. The function is of this protein family is unknown.
Probab=29.39 E-value=54 Score=23.72 Aligned_cols=29 Identities=28% Similarity=0.410 Sum_probs=19.6
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
++.-+.+.|..-. +|+.||++.+||+...
T Consensus 4 ~i~Hv~i~V~Dle-~s~~FY~~~LG~~~~~ 32 (162)
T TIGR03645 4 TFSHIGISVPDLD-AAVKFYTEVLGWYLIM 32 (162)
T ss_pred eEEEEEEEeCCHH-HHHHHHHHhcCCEEEe
Confidence 4455666655433 7899997758998753
No 181
>cd07254 Glo_EDI_BRP_like_20 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and types I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=28.80 E-value=96 Score=20.56 Aligned_cols=27 Identities=15% Similarity=0.365 Sum_probs=18.1
Q ss_pred EEEEEecCc-HHHHHHHhhhcCceEece
Q 028270 107 VSLHVRKSN-RAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 107 i~l~v~~~N-~~a~~~Y~k~~GF~~~~~ 133 (211)
+.+.....| .++.+||++.+||+....
T Consensus 3 ~hv~l~v~d~~~a~~FY~~~lG~~~~~~ 30 (120)
T cd07254 3 FHVALNVDDLEASIAFYSKLFGVEPTKV 30 (120)
T ss_pred EEEEEEeCCHHHHHHHHHHHhCCeEecc
Confidence 333333344 488999999679987654
No 182
>PF02388 FemAB: FemAB family; InterPro: IPR003447 The femAB operon codes for two nearly identical approximately 50kDa proteins involved in the formation of the Staphylococcal pentaglycine interpeptide bridge in peptidoglycan []. These proteins are also considered as a factor influencing the level of methicillin resistance [].; GO: 0016755 transferase activity, transferring amino-acyl groups; PDB: 1XE4_A 1NE9_A 3GKR_A 1XIX_A 1P4N_A 1XF8_A 1LRZ_A.
Probab=27.63 E-value=3.9e+02 Score=22.80 Aligned_cols=57 Identities=11% Similarity=-0.108 Sum_probs=40.9
Q ss_pred CcEEEEEEEEEecCCCceeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEE-EEe
Q 028270 51 GRIVGYVLAKMEEESNECHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSL-HVR 112 (211)
Q Consensus 51 g~ivG~~~~~~~~~~~~~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l-~v~ 112 (211)
+.+++.+.+..... .++...-+..++|+..+-.-.|.-++++++++ .|+...-+ .+.
T Consensus 302 ~~~la~~l~~~~g~----~~~yly~gs~~~~~~~~~~~~l~~~~i~~a~~-~G~~~ydf~Gi~ 359 (406)
T PF02388_consen 302 EIPLAGALFIYYGD----EAYYLYGGSDEEYRKFYAPYLLQWEAIKYAKE-KGIKRYDFGGIS 359 (406)
T ss_dssp EEEEEEEEEEEETT----EEEEEEEEE-CGCGGCTHHHHHHHHHHHHHHH-TT-SEEEEEE-S
T ss_pred cceEEEEEEEEECC----EEEEEECccchhhHhcCcchHHHHHHHHHHHH-CCCCEEEeeCCC
Confidence 34566655555554 55555678899999999999999999999999 89997766 444
No 183
>cd08342 HPPD_N_like N-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HPPD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of HPP to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two, instead of three, su
Probab=27.31 E-value=1.1e+02 Score=21.16 Aligned_cols=27 Identities=15% Similarity=0.292 Sum_probs=19.3
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
+.+.|. +=.++++||++.+||+.....
T Consensus 4 i~i~V~-D~e~s~~FY~~vLGf~~~~~~ 30 (136)
T cd08342 4 VEFYVG-NAKQLASWFSTKLGFEPVAYH 30 (136)
T ss_pred EEEEeC-CHHHHHHHHHHhcCCeEEEec
Confidence 445553 344789999998999987643
No 184
>PF12681 Glyoxalase_2: Glyoxalase-like domain; PDB: 3G12_B 1JIF_B 1JIE_B 1QTO_A 3OXH_A 2PJS_A 2RBB_A 3SK1_B 3SK2_B 3RRI_A ....
Probab=27.18 E-value=61 Score=20.91 Aligned_cols=19 Identities=26% Similarity=0.497 Sum_probs=15.8
Q ss_pred HHHHHHHhhhcCceEecee
Q 028270 116 RAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~~ 134 (211)
..+.+||++.+||+.....
T Consensus 7 ~~a~~FY~~~lg~~~~~~~ 25 (108)
T PF12681_consen 7 EAAAAFYEDVLGFEVVFDD 25 (108)
T ss_dssp HHHHHHHHHTTTSEEEEEE
T ss_pred HHHHHHHHHhcCCEEEEeC
Confidence 4789999987999998843
No 185
>PRK04101 fosfomycin resistance protein FosB; Provisional
Probab=26.93 E-value=74 Score=22.10 Aligned_cols=30 Identities=20% Similarity=0.370 Sum_probs=20.2
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
++..+.+.|..- .++.+||++.+||++...
T Consensus 4 ~i~hi~L~v~Dl-~~s~~FY~~~lG~~~~~~ 33 (139)
T PRK04101 4 GINHICFSVSNL-EKSIEFYEKVLGAKLLVK 33 (139)
T ss_pred cEEEEEEEecCH-HHHHHHHHhccCCEEEee
Confidence 444555555533 378999987699998753
No 186
>cd07267 THT_Oxygenase_N N-terminal domain of 2,4,5-trihydroxytoluene (THT) oxygenase. This subfamily contains the N-terminal, non-catalytic, domain of THT oxygenase. THT oxygenase is an extradiol dioxygenase in the 2,4-dinitrotoluene (DNT) degradation pathway. It catalyzes the conversion of 2,4,5-trihydroxytoluene to an unstable ring fission product, 2,4-dihydroxy-5-methyl-6-oxo-2,4-hexadienoic acid. The native protein was determined to be a dimer by gel filtration. The enzyme belongs to the type I family of extradiol dioxygenases which contains two structurally homologous barrel-shaped domains at the N- and C-terminus of each monomer. The active-site metal is located in the C-terminal barrel. Fe(II) is required for its catalytic activity.
Probab=26.83 E-value=1e+02 Score=20.35 Aligned_cols=26 Identities=15% Similarity=0.170 Sum_probs=17.8
Q ss_pred EEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 106 YVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 106 ~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
.+.+.|.. =.++.+||+. +||+....
T Consensus 6 hv~l~v~D-l~~s~~FY~~-lGl~~~~~ 31 (113)
T cd07267 6 HVRFEHPD-LDKAERFLTD-FGLEVAAR 31 (113)
T ss_pred EEEEccCC-HHHHHHHHHH-cCCEEEEe
Confidence 34444443 2378999999 99987654
No 187
>PF14506 CppA_N: CppA N-terminal; PDB: 3E0R_D.
Probab=26.79 E-value=46 Score=23.23 Aligned_cols=20 Identities=30% Similarity=0.609 Sum_probs=13.7
Q ss_pred HHHHHHhhhcCceEeceeec
Q 028270 117 AAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 117 ~a~~~Y~k~~GF~~~~~~~~ 136 (211)
..+.||++++||+...+.-.
T Consensus 13 ~ni~FY~~~LGfkll~EEna 32 (125)
T PF14506_consen 13 LNIDFYQKTLGFKLLSEENA 32 (125)
T ss_dssp HHHHHHTTTT--EEEEEETT
T ss_pred HhHHHHHhccCcEEeecccc
Confidence 56899998899998875433
No 188
>COG0807 RibA GTP cyclohydrolase II [Coenzyme metabolism]
Probab=26.54 E-value=1.4e+02 Score=22.78 Aligned_cols=52 Identities=13% Similarity=0.277 Sum_probs=38.1
Q ss_pred EEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 74 SLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 74 ~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
.++-.+++|..|+|.++|. . +|++.|.|.+. |+.-+.-.+. +|.+++.+...
T Consensus 119 ~lg~~~D~R~ygigAqIL~-------d-LGI~~irLLtn--np~K~~~l~~-~Gi~vverv~~ 170 (193)
T COG0807 119 ALGFPADERDYGIGAQILK-------D-LGIKKIRLLTN--NPRKIYGLEG-FGINVVERVPL 170 (193)
T ss_pred hhcCCchHHHHHHHHHHHH-------H-cCCcEEEEecC--ChHHHHHHHh-CCceEEEEeec
Confidence 4556788999999998875 2 79999998755 6654666677 77777776554
No 189
>PF14696 Glyoxalase_5: Hydroxyphenylpyruvate dioxygenase, HPPD, N-terminal ; PDB: 1CJX_A 2R5V_A.
Probab=26.43 E-value=35 Score=24.44 Aligned_cols=33 Identities=24% Similarity=0.399 Sum_probs=23.3
Q ss_pred cCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 102 FGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 102 ~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
.|+..|...+... ..+..++++ +||+.+++.+.
T Consensus 8 ~G~dFvEFa~~~~-~~l~~~~~~-lGF~~~a~hrs 40 (139)
T PF14696_consen 8 DGFDFVEFAVPDA-QALAQLFTA-LGFQPVARHRS 40 (139)
T ss_dssp EEEEEEEEE-SST-TSCHHHHCC-CCEEEECCECC
T ss_pred CCeEEEEEecCCH-HHHHHHHHH-hCcceEEecCC
Confidence 4566677666553 456778899 99999997655
No 190
>PF10566 Glyco_hydro_97: Glycoside hydrolase 97 ; InterPro: IPR019563 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. This is the 97th family of glycosidases, in this case bacterial. The central part of the GH97 family protein sequences represents a typical and complete (beta/alpha)8-barrel or catalytic TIM-barrel type domain. The N- and C-terminal parts of the sequences, mainly consisting of beta-strands, most probably form two additional non-catalytic domains with as yet unknown functions. The non-catalytic domains of glycosidases from the alpha-galactosidase and alpha-glucosidase superfamilies are also predominantly composed of beta-strands, and at least some of these domains are involved in oligomerisation and carbohydrate binding. In all known glycosidases with the (beta-alpha)8-barrel fold, the amino acid residues at the active site are located on the C-termini of the beta-strands []. ; PDB: 2JKP_A 2JKE_A 2D73_B 2ZQ0_B 2JKA_A 3A24_A.
Probab=26.40 E-value=1.7e+02 Score=23.64 Aligned_cols=41 Identities=20% Similarity=0.269 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHHHHhcCCcEEEEEEecCc-----------HHHHHHHhhhcCce
Q 028270 86 LATKLMNAAQSAMEQVFGAEYVSLHVRKSN-----------RAAFNLYTETLGYK 129 (211)
Q Consensus 86 ig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N-----------~~a~~~Y~k~~GF~ 129 (211)
+...-|..+++++++ .|+. |+|.+.... ..+.+.|++ +|-+
T Consensus 70 ~~~~dl~elv~Ya~~-KgVg-i~lw~~~~~~~~~~~~~~~~~~~f~~~~~-~Gv~ 121 (273)
T PF10566_consen 70 IPDFDLPELVDYAKE-KGVG-IWLWYHSETGGNVANLEKQLDEAFKLYAK-WGVK 121 (273)
T ss_dssp -TT--HHHHHHHHHH-TT-E-EEEEEECCHTTBHHHHHCCHHHHHHHHHH-CTEE
T ss_pred CCccCHHHHHHHHHH-cCCC-EEEEEeCCcchhhHhHHHHHHHHHHHHHH-cCCC
Confidence 344567788888887 6776 555555444 566777888 7765
No 191
>cd06588 PhnB_like Escherichia coli PhnB and similar proteins; the E. coli phnB gene is found next to an operon involved in the cleavage of carbon-phosphorus bonds in unactivated alkylphosphonates. The Escherichia coli phnB gene is found next to an operon of fourteen genes (phnC-to-phnP) related to the cleavage of carbon-phosphorus (C-P) bonds in unactivated alkylphosphonates, supporting bacterial growth on alkylphosphonates as the sole phosphorus source. It was originally considered part of that operon. PhnB appears to play no direct catalytic role in the usage of alkylphosphonate. Although many of the proteins in this family have been annotated as 3-demethylubiquinone-9 3-methyltransferase enzymes by automatic annotation programs, the experimental evidence for this assignment is lacking. In Escherichia coli, the gene coding 3-demethylubiquinone-9 3-methyltransferase enzyme is ubiG, which belongs to the AdoMet-MTase protein family. PhnB-like proteins adopt a structural fold similar to
Probab=26.01 E-value=1e+02 Score=21.01 Aligned_cols=28 Identities=18% Similarity=0.335 Sum_probs=20.8
Q ss_pred EEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 108 SLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 108 ~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
+|.+..+-..|+.||++.+||++.....
T Consensus 4 ~L~~~~~~~eAi~FY~~~fg~~~~~~~~ 31 (128)
T cd06588 4 YLWFNGNAEEALEFYQSVFGGEITSLTR 31 (128)
T ss_pred EEeeCCCHHHHHHHHHHHhCCEeEEEEE
Confidence 4555455568999999878999887553
No 192
>cd07238 Glo_EDI_BRP_like_5 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The structure of this family is a that of a strand-swapped dimer.
Probab=25.87 E-value=73 Score=20.84 Aligned_cols=17 Identities=29% Similarity=0.489 Sum_probs=13.6
Q ss_pred HHHHHHHhhhcCceEec
Q 028270 116 RAAFNLYTETLGYKIHD 132 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~ 132 (211)
..+..||++.+||+...
T Consensus 12 ~~s~~FY~~~lG~~~~~ 28 (112)
T cd07238 12 EAAAAFYADVLGLDVVM 28 (112)
T ss_pred HHHHHHHHHhcCceEEE
Confidence 37899998769999753
No 193
>cd07252 BphC1-RGP6_N_like N-terminal domain of 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC, EC 1.13.11.39) 1 from Rhodococcus globerulus P6 (BphC1-RGP6) and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of BphC1-RGP6 and similar proteins. BphC catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, the third step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). This subfamily of BphCs belongs to the type I extradiol dioxygenase family, which require a metal in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of 2,3-dihydroxybiphenyl 1,2-dioxygenases. For example, three types of BphC enzymes have been found in Rhodococcus globerulus (BphC1-RGP6 - BphC3-RGP6), all three enzymes are type I extradiol dioxygenases. BphC1-RGP6 has an internal duplication, it is a two-domain dioxygenase which forms octamers, and has Fe(II) at the catalytic site. Its N-
Probab=25.13 E-value=75 Score=21.29 Aligned_cols=27 Identities=22% Similarity=0.359 Sum_probs=18.1
Q ss_pred EEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 106 YVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 106 ~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
.+.+.|..-. +|.+||+..+||+....
T Consensus 5 ~v~l~v~Dl~-~s~~FY~~~LG~~~~~~ 31 (120)
T cd07252 5 YLGVESSDLD-AWRRFATDVLGLQVGDR 31 (120)
T ss_pred EEEEEeCCHH-HHHHHHHhccCceeccC
Confidence 3555554333 78999977579987653
No 194
>cd07253 Glo_EDI_BRP_like_2 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=24.97 E-value=85 Score=20.65 Aligned_cols=31 Identities=26% Similarity=0.402 Sum_probs=21.7
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
++..+.+.|. +-.++++||++.+||+.....
T Consensus 3 ~l~hi~l~v~-d~~~s~~Fy~~~lG~~~~~~~ 33 (125)
T cd07253 3 RIDHVVLTVA-DIEATLDFYTRVLGMEVVRFG 33 (125)
T ss_pred ccceEEEEec-CHHHHHHHHHHHhCceeeccc
Confidence 4455666664 334789999997899987643
No 195
>cd07255 Glo_EDI_BRP_like_12 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=24.78 E-value=77 Score=21.10 Aligned_cols=29 Identities=21% Similarity=0.425 Sum_probs=19.8
Q ss_pred cEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 105 EYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 105 ~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
..+.+.|..-+ ++.+||.+.+||++....
T Consensus 4 ~hi~l~v~d~~-~~~~Fy~~~lG~~~~~~~ 32 (125)
T cd07255 4 GAVTLRVADLE-RSLAFYQDVLGLEVLERT 32 (125)
T ss_pred EEEEEEECCHH-HHHHHHHhccCcEEEEcC
Confidence 34555554333 679999875899988753
No 196
>PF04339 DUF482: Protein of unknown function, DUF482; InterPro: IPR007434 This family contains several proteins of uncharacterised function.
Probab=24.50 E-value=4.4e+02 Score=22.35 Aligned_cols=119 Identities=13% Similarity=0.069 Sum_probs=72.6
Q ss_pred EeCChhhHHHHHHhhhhcCCccchhHHHHHHHhcCC------Ce--EEEEEecCCcEEEEEEEEEecCCC-c--------
Q 028270 5 RKATVDDLLAMQACNLFCLPENYQMKYYFYHILSWP------QL--LYVAEDYNGRIVGYVLAKMEEESN-E-------- 67 (211)
Q Consensus 5 r~~~~~D~~~l~~l~~~~~~~~~~~~~~~~~~~~~~------~~--~~v~~~~~g~ivG~~~~~~~~~~~-~-------- 67 (211)
..+..++++.+.. .-..|+....|+..+-... ++ .+++..++|++||.+-+....... +
T Consensus 3 ~~I~~~~W~~l~~----~~~~PF~~~~fL~aLE~sg~v~~~tGW~p~hl~~~~~~~lvaa~P~YlK~hS~GEyvFD~~Wa 78 (370)
T PF04339_consen 3 SEIPAADWDALAG----PDDNPFLRHAFLAALEESGSVGPETGWQPRHLTLRDGGRLVAAAPLYLKSHSYGEYVFDWAWA 78 (370)
T ss_pred hhCCHHHHHHHhC----CCCCchhhHHHHHHHHHcCCcCCCCCCcceEEEEEECCEEEEEeeeeeecccCcceehhHHHH
Confidence 3444555555432 1234566666666654321 11 334444489999999776653321 1
Q ss_pred ---------------------eeEEEEEEEEcCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhc
Q 028270 68 ---------------------CHGHITSLAVLRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETL 126 (211)
Q Consensus 68 ---------------------~~~~i~~l~V~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~ 126 (211)
|.. =..+.+++......+...|++.+.+.+.+ .|+..+.+. -.++.-....+. .
T Consensus 79 ~a~~r~g~~YYPKlv~avPfTPv~-G~R~l~~~~~~~~~~~~~L~~~~~~~a~~-~~~Ss~h~l--F~~~~~~~~l~~-~ 153 (370)
T PF04339_consen 79 DAYQRAGLRYYPKLVGAVPFTPVT-GPRLLIAPGADRAALRAALLQALEQLAEE-NGLSSWHIL--FPDEEDAAALEE-A 153 (370)
T ss_pred HHHHHhccccCcceEeeeCCCCCc-ccceeECCCCCHHHHHHHHHHHHHHHHHH-cCCCcceee--cCCHHHHHHHHh-C
Confidence 100 12567778888888999999999999998 788766653 222334566788 8
Q ss_pred CceEec
Q 028270 127 GYKIHD 132 (211)
Q Consensus 127 GF~~~~ 132 (211)
||....
T Consensus 154 G~~~r~ 159 (370)
T PF04339_consen 154 GFLSRQ 159 (370)
T ss_pred CCceec
Confidence 998654
No 197
>PRK14968 putative methyltransferase; Provisional
Probab=24.28 E-value=2e+02 Score=20.79 Aligned_cols=46 Identities=9% Similarity=0.193 Sum_probs=25.4
Q ss_pred HHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 89 KLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 89 ~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
.+++.+.+.++. .|.-.+.......+.....+.++ .||+.......
T Consensus 129 ~~i~~~~~~Lk~-gG~~~~~~~~~~~~~~l~~~~~~-~g~~~~~~~~~ 174 (188)
T PRK14968 129 RFLDEVGRYLKP-GGRILLLQSSLTGEDEVLEYLEK-LGFEAEVVAEE 174 (188)
T ss_pred HHHHHHHHhcCC-CeEEEEEEcccCCHHHHHHHHHH-CCCeeeeeeec
Confidence 345555555544 33221222222345667889999 99987764443
No 198
>cd08354 Glo_EDI_BRP_like_13 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=24.01 E-value=1.3e+02 Score=19.77 Aligned_cols=19 Identities=26% Similarity=0.317 Sum_probs=14.7
Q ss_pred cHHHHHHHhhhcCceEece
Q 028270 115 NRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 115 N~~a~~~Y~k~~GF~~~~~ 133 (211)
-..++.||++.+||++...
T Consensus 11 ~~~s~~Fy~~~lG~~~~~~ 29 (122)
T cd08354 11 LEAAEAFYEDVLGLELMLK 29 (122)
T ss_pred HHHHHHHHHhccCCEEeec
Confidence 3378999987589998763
No 199
>PLN03042 Lactoylglutathione lyase; Provisional
Probab=23.96 E-value=1.5e+02 Score=22.17 Aligned_cols=19 Identities=21% Similarity=0.513 Sum_probs=15.1
Q ss_pred HHHHHHHhhhcCceEecee
Q 028270 116 RAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~~ 134 (211)
..++.||++.+||+...+.
T Consensus 39 e~Si~FY~~vLG~~~~~r~ 57 (185)
T PLN03042 39 KASLDFYSRVLGMSLLKRL 57 (185)
T ss_pred HHHHHHHHhhcCCEEEEEE
Confidence 3789999865899987754
No 200
>cd07241 Glo_EDI_BRP_like_3 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=23.85 E-value=91 Score=20.57 Aligned_cols=25 Identities=12% Similarity=0.250 Sum_probs=17.3
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEec
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+.+.|.. =.++++||++.+||+...
T Consensus 5 i~l~v~d-l~~s~~FY~~~lg~~~~~ 29 (125)
T cd07241 5 VAIWTKD-LERMKAFYVTYFGATSNE 29 (125)
T ss_pred EEEEecC-HHHHHHHHHHHhCCEeec
Confidence 4455443 337899999967998754
No 201
>cd09013 BphC-JF8_N_like N-terminal, non-catalytic, domain of BphC_JF8, (2,3-dihydroxybiphenyl 1,2-dioxygenase) from Bacillus sp. JF8 and similar proteins. 2,3-dihydroxybiphenyl 1,2-dioxygenase (BphC) catalyzes the extradiol ring cleavage reaction of 2,3-dihydroxybiphenyl, a key step in the polychlorinated biphenyls (PCBs) degradation pathway (bph pathway). BphC belongs to the type I extradiol dioxygenase family, which requires a metal ion in the active site in its catalytic mechanism. Polychlorinated biphenyl degrading bacteria demonstrate a multiplicity of BphCs. This subfamily of BphC is represented by the enzyme purified from the thermophilic biphenyl and naphthalene degrader, Bacillus sp. JF8. The members in this family of BphC enzymes may use either Mn(II) or Fe(II) as cofactors. The enzyme purified from Bacillus sp. JF8 is Mn(II)-dependent, however, the enzyme from Rhodococcus jostii RHAI has Fe(II) bound to it. BphC_JF8 is thermostable and its optimum activity is at 85 degrees C
Probab=23.71 E-value=86 Score=20.91 Aligned_cols=29 Identities=21% Similarity=0.264 Sum_probs=19.4
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
+..+.+.|.. =.++.+||++.+||++..+
T Consensus 7 i~hv~l~v~d-l~~a~~FY~~~lG~~~~~~ 35 (121)
T cd09013 7 LAHVELLTPK-PEESLWFFTDVLGLEETGR 35 (121)
T ss_pred eeEEEEEeCC-HHHHHHHHHhCcCCEEEee
Confidence 3445555443 2478999988579998764
No 202
>COG5428 Uncharacterized conserved small protein [Function unknown]
Probab=23.55 E-value=1.4e+02 Score=18.52 Aligned_cols=24 Identities=17% Similarity=0.332 Sum_probs=17.7
Q ss_pred CCeEEEEEecCCcEEEEEEEEEec
Q 028270 40 PQLLYVAEDYNGRIVGYVLAKMEE 63 (211)
Q Consensus 40 ~~~~~v~~~~~g~ivG~~~~~~~~ 63 (211)
.+..|+-.+++|+|+|+=+|.-..
T Consensus 29 ~edi~Idide~GkV~GiEi~~As~ 52 (69)
T COG5428 29 GEDILIDIDENGKVIGIEIWNASA 52 (69)
T ss_pred CCcEEEEecCCCcEEEEEEEchhh
Confidence 345677777789999988876543
No 203
>PLN02300 lactoylglutathione lyase
Probab=23.41 E-value=60 Score=25.98 Aligned_cols=30 Identities=27% Similarity=0.324 Sum_probs=19.9
Q ss_pred CCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 103 GAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 103 g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
++..+.+.|..-+ ++++||++.+||+...+
T Consensus 24 ~l~Hv~l~V~Dle-~s~~FY~~vLG~~~~~~ 53 (286)
T PLN02300 24 RMLHVVYRVGDLD-RTIKFYTECLGMKLLRK 53 (286)
T ss_pred eEEEEEEEeCCHH-HHHHHHHHhcCCEEEEe
Confidence 4444555554333 78999987589998754
No 204
>PRK11478 putative lyase; Provisional
Probab=23.40 E-value=75 Score=21.37 Aligned_cols=28 Identities=11% Similarity=0.368 Sum_probs=18.2
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEec
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+..+.+.|.. =.++++||.+.+||++..
T Consensus 7 i~hv~l~v~D-~~~a~~FY~~~LG~~~~~ 34 (129)
T PRK11478 7 VHHIAIIATD-YAVSKAFYCDILGFTLQS 34 (129)
T ss_pred ecEEEEEcCC-HHHHHHHHHHHhCCEecc
Confidence 3445555433 337899997658999764
No 205
>cd08361 PpCmtC_N N-terminal domain of 2,3-dihydroxy-p-cumate-3,4-dioxygenase (PpCmtC). This subfamily contains the N-terminal, non-catalytic, domain of PpCmtC. 2,3-dihydroxy-p-cumate-3,4-dioxygenase (CmtC of Pseudomonas putida F1) is a dioxygenase involved in the eight-step catabolism pathway of p-cymene. CmtC acts upon the reaction intermediate 2,3-dihydroxy-p-cumate, yielding 2-hydroxy-3-carboxy-6-oxo-7-methylocta-2,4-dienoate. The CmtC belongs to the type I family of extradiol dioxygenases. Fe2+ was suggested as a cofactor, same as other enzymes in the family. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=23.37 E-value=1.1e+02 Score=20.68 Aligned_cols=28 Identities=29% Similarity=0.426 Sum_probs=18.3
Q ss_pred cEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 105 EYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 105 ~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
..+.+.|. +=.++.+||++.+||++...
T Consensus 8 ~~v~l~v~-d~~~s~~FY~~vLG~~~~~~ 35 (124)
T cd08361 8 AYVRLGTR-DLAGATRFATDILGLQVAER 35 (124)
T ss_pred eEEEEeeC-CHHHHHHHHHhccCceeccC
Confidence 33444444 23378999988679997653
No 206
>COG2764 PhnB Uncharacterized protein conserved in bacteria [Function unknown]
Probab=23.12 E-value=1.3e+02 Score=21.51 Aligned_cols=28 Identities=21% Similarity=0.288 Sum_probs=19.8
Q ss_pred EEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 108 SLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 108 ~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
||...-+-..|+.||++.+|++...+..
T Consensus 5 Yl~f~gn~~~Al~fY~~vFgae~~~~~~ 32 (136)
T COG2764 5 YLFFNGNAREALAFYKEVFGAEELKRVP 32 (136)
T ss_pred EEEECCCHHHHHHHHHHHhCceEEEEEE
Confidence 3443334458999999988998887554
No 207
>PF13289 SIR2_2: SIR2-like domain
Probab=23.12 E-value=2e+02 Score=19.70 Aligned_cols=23 Identities=4% Similarity=0.195 Sum_probs=11.0
Q ss_pred EEEEEecCc-HHHHHHHhhhcCceE
Q 028270 107 VSLHVRKSN-RAAFNLYTETLGYKI 130 (211)
Q Consensus 107 i~l~v~~~N-~~a~~~Y~k~~GF~~ 130 (211)
+++.+.... .....++++ .|.++
T Consensus 119 ~~~v~~~~~~~~~~~~~~~-~~i~~ 142 (143)
T PF13289_consen 119 HYIVIPDPDDENEREFLEK-YGIEV 142 (143)
T ss_pred EEEEEcCCchHHHHHHHHH-cCCEE
Confidence 444333333 444556666 66543
No 208
>PF02836 Glyco_hydro_2_C: Glycosyl hydrolases family 2, TIM barrel domain; InterPro: IPR006103 O-Glycosyl hydrolases 3.2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 2 GH2 from CAZY comprises enzymes with several known activities; beta-galactosidase (3.2.1.23 from EC); beta-mannosidase (3.2.1.25 from EC); beta-glucuronidase (3.2.1.31 from EC). These enzymes contain a conserved glutamic acid residue which has been shown [], in Escherichia coli lacZ (P00722 from SWISSPROT), to be the general acid/base catalyst in the active site of the enzyme. Beta-galactosidase from E. coli has a TIM-barrel-like core surrounded by four other largely beta domains [].; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 3CMG_A 3FN9_C 1YQ2_A 3K4D_B 3LPG_B 3LPF_A 3K4A_B 3K46_B 3GM8_A 3DEC_A ....
Probab=22.79 E-value=3.3e+02 Score=21.85 Aligned_cols=65 Identities=12% Similarity=0.138 Sum_probs=39.5
Q ss_pred EEEEEEEEcCCc--cccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceeec
Q 028270 70 GHITSLAVLRTH--RKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEAK 136 (211)
Q Consensus 70 ~~i~~l~V~p~~--rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~~ 136 (211)
..|..+.-++.+ .|.-+-...+..-+..+++ +|++.|.+.-.+..+..+.+..+ +|+-+......
T Consensus 15 ~~l~Gv~~h~~~~~~g~a~~~~~~~~d~~l~k~-~G~N~iR~~h~p~~~~~~~~cD~-~GilV~~e~~~ 81 (298)
T PF02836_consen 15 IFLRGVNRHQDYPGLGRAMPDEAMERDLELMKE-MGFNAIRTHHYPPSPRFYDLCDE-LGILVWQEIPL 81 (298)
T ss_dssp E-EEEEEE-S-BTTTBT---HHHHHHHHHHHHH-TT-SEEEETTS--SHHHHHHHHH-HT-EEEEE-S-
T ss_pred EEEEEEeeCcCcccccccCCHHHHHHHHHHHHh-cCcceEEcccccCcHHHHHHHhh-cCCEEEEeccc
Confidence 444555555544 3444567777777888888 89999998766777788889999 99988765433
No 209
>cd07240 ED_TypeI_classII_N N-terminal domain of type I, class II extradiol dioxygenases; non-catalytic domain. This family contains the N-terminal, non-catalytic, domain of type I, class II extradiol dioxygenases. Dioxygenases catalyze the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms, resulting in the cleavage of aromatic rings. Two major groups of dioxygenases have been identified according to the cleavage site; extradiol enzymes cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon, whereas intradiol enzymes cleave the aromatic ring between two hydroxyl groups. Extradiol dioxygenases are classified into type I and type II enzymes. Type I extradiol dioxygenases include class I and class II enzymes. These two classes of enzymes show sequence similarity; the two-domain class II enzymes evolved from a class I enzyme through gene duplication. The extradiol dioxygenases represented in this fa
Probab=22.69 E-value=1.4e+02 Score=19.46 Aligned_cols=19 Identities=32% Similarity=0.656 Sum_probs=15.8
Q ss_pred HHHHHHHhhhcCceEecee
Q 028270 116 RAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~~ 134 (211)
.++++||++.+||+.....
T Consensus 14 ~~~~~FY~~~lg~~~~~~~ 32 (117)
T cd07240 14 ERALEFYTDVLGLTVLDRD 32 (117)
T ss_pred HHHHHHHHhccCcEEEeec
Confidence 3789999998899988654
No 210
>PRK10291 glyoxalase I; Provisional
Probab=22.43 E-value=83 Score=21.35 Aligned_cols=18 Identities=28% Similarity=0.604 Sum_probs=14.2
Q ss_pred HHHHHHHhhhcCceEece
Q 028270 116 RAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~ 133 (211)
.+++.||++.+||+....
T Consensus 8 e~s~~FY~~~LG~~~~~~ 25 (129)
T PRK10291 8 QRSIDFYTNVLGMKLLRT 25 (129)
T ss_pred HHHHHHHHhccCCEEEEe
Confidence 478999977689997653
No 211
>TIGR00068 glyox_I lactoylglutathione lyase. Glyoxylase I is a homodimer in many species. In some eukaryotes, including yeasts and plants, the orthologous protein carries a tandem duplication, is twice as long, and hits this model twice.
Probab=22.42 E-value=99 Score=21.76 Aligned_cols=31 Identities=26% Similarity=0.314 Sum_probs=20.5
Q ss_pred cCCcEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 102 FGAEYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 102 ~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
.++..+.+.|..-+ ++..||+..+||+....
T Consensus 16 ~~i~hv~l~v~Dl~-~a~~FY~~vLG~~~~~~ 46 (150)
T TIGR00068 16 RRLLHTMLRVGDLD-KSLDFYTEVLGMKLLRK 46 (150)
T ss_pred ceEEEEEEEecCHH-HHHHHHHHhcCCEEEEE
Confidence 34455556555433 78999986589997653
No 212
>PF04015 DUF362: Domain of unknown function (DUF362) ; InterPro: IPR007160 This domain is found in some iron-sulphur proteins.
Probab=22.07 E-value=2e+02 Score=21.58 Aligned_cols=49 Identities=10% Similarity=0.165 Sum_probs=36.3
Q ss_pred ccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCc--HHHHHHHhhhcCceEece
Q 028270 83 KLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSN--RAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 83 g~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N--~~a~~~Y~k~~GF~~~~~ 133 (211)
+.-.--.+++.+++.+++ .|...+.+.-.+.. ......++. .||.....
T Consensus 17 ~~~T~P~vv~avv~~l~~-~g~~~i~i~e~~~~~~~~~~~~~~~-~G~~~~~~ 67 (206)
T PF04015_consen 17 GATTHPEVVRAVVEMLKE-AGAKEIIIAESPGSGAADTREVFKR-SGYEEIAE 67 (206)
T ss_pred CccCCHHHHHHHHHHHHH-cCCCceEEEeCCCcchHhHHHHHHH-cchhhHHH
Confidence 334456799999999998 89886776544433 467889999 99987753
No 213
>cd08344 MhqB_like_N N-terminal domain of MhqB, a type I extradiol dioxygenase, and similar proteins. This subfamily contains the N-terminal, non-catalytic, domain of Burkholderia sp. NF100 MhqB and similar proteins. MhqB is a type I extradiol dioxygenase involved in the catabolism of methylhydroquinone, an intermediate in the degradation of fenitrothion. The purified enzyme has shown extradiol ring cleavage activity toward 3-methylcatechol. Fe2+ was suggested as a cofactor, the same as most other enzymes in the family. Burkholderia sp. NF100 MhqB is encoded on the plasmid pNF1. The type I family of extradiol dioxygenases contains two structurally homologous barrel-shaped domains at the N- and C-terminal. The active-site metal is located in the C-terminal barrel and plays an essential role in the catalytic mechanism.
Probab=21.36 E-value=89 Score=20.56 Aligned_cols=27 Identities=19% Similarity=0.364 Sum_probs=18.1
Q ss_pred cEEEEEEecCcHHHHHHHhhhcCceEece
Q 028270 105 EYVSLHVRKSNRAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 105 ~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~ 133 (211)
..+.+.|.. =.++.+||+. +||++...
T Consensus 4 ~hv~l~v~d-~~~s~~FY~~-lG~~~~~~ 30 (112)
T cd08344 4 DHFALEVPD-LEVARRFYEA-FGLDVREE 30 (112)
T ss_pred eEEEEecCC-HHHHHHHHHH-hCCcEEee
Confidence 334444432 2378999998 99998753
No 214
>PRK09318 bifunctional 3,4-dihydroxy-2-butanone 4-phosphate synthase/GTP cyclohydrolase II protein; Provisional
Probab=21.00 E-value=1.8e+02 Score=24.84 Aligned_cols=47 Identities=17% Similarity=0.259 Sum_probs=29.6
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
.+++|..|+|.++|. . +|++++.|.+ +|+.-+.-.+. +|.+++++.+
T Consensus 310 ~~D~RdygigAqIL~-------d-LGV~~irLLT--Nnp~K~~~L~~-~GieV~~~vp 356 (387)
T PRK09318 310 KEDERDYAAAFQILK-------A-LGIEKVRLLT--NNPRKTKALEK-YGIEVVETVP 356 (387)
T ss_pred CccceeeeHHHHHHH-------H-cCCCEEEECC--CCHHHHHHHHh-CCCEEEEEec
Confidence 445555555555543 2 6888777664 46655666778 8888887654
No 215
>PTZ00129 40S ribosomal protein S14; Provisional
Probab=20.96 E-value=3.4e+02 Score=19.76 Aligned_cols=51 Identities=16% Similarity=0.232 Sum_probs=38.7
Q ss_pred ccCHH-HHHHHHHHHHHHHhcCCcEEEEEE-----------ecCcHHHHHHHhhhcCceEeceee
Q 028270 83 KLGLA-TKLMNAAQSAMEQVFGAEYVSLHV-----------RKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 83 g~Gig-~~Ll~~~~~~~~~~~g~~~i~l~v-----------~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
+.-|+ ....+.+.+.+.+ +|+..+.+.+ .+....|++-..+ .|+++.....
T Consensus 69 sTpyAAq~aa~~~a~k~~~-~Gi~~v~V~vr~~gg~~~kg~GpGr~~airaL~~-~glkI~~I~D 131 (149)
T PTZ00129 69 SSPYAAMMAAQDVAARCKE-LGINALHIKLRATGGVRTKTPGPGAQAALRALAR-AGLKIGRIED 131 (149)
T ss_pred CCHHHHHHHHHHHHHHHHH-cCCeEEEEEEEecCCCCCCCCCCCHHHHHHHHHH-CCCEEEEEEe
Confidence 33444 4456667777887 8999999988 5777889999999 9999877443
No 216
>cd08359 Glo_EDI_BRP_like_22 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The structures of this family demonstrate domain swapping, which is shared by glyoxalase I and antibiotic resistance proteins.
Probab=20.90 E-value=1.4e+02 Score=19.57 Aligned_cols=17 Identities=12% Similarity=0.352 Sum_probs=13.8
Q ss_pred HHHHHHhhhcCceEece
Q 028270 117 AAFNLYTETLGYKIHDV 133 (211)
Q Consensus 117 ~a~~~Y~k~~GF~~~~~ 133 (211)
++..||.+.+||+....
T Consensus 14 ~s~~FY~~~lG~~~~~~ 30 (119)
T cd08359 14 ETADFYVRHFGFTVVFD 30 (119)
T ss_pred HHHHHHHHhhCcEEEec
Confidence 78999976599998754
No 217
>cd09011 Glo_EDI_BRP_like_23 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping.
Probab=20.83 E-value=1e+02 Score=20.53 Aligned_cols=25 Identities=24% Similarity=0.312 Sum_probs=17.1
Q ss_pred EEEEEecCcHHHHHHHhhhcCceEec
Q 028270 107 VSLHVRKSNRAAFNLYTETLGYKIHD 132 (211)
Q Consensus 107 i~l~v~~~N~~a~~~Y~k~~GF~~~~ 132 (211)
+.+.|. +-.++.+||+..+||+...
T Consensus 6 ~~l~v~-D~~~a~~FY~~~lG~~~~~ 30 (120)
T cd09011 6 PLLVVK-DIEKSKKFYEKVLGLKVVM 30 (120)
T ss_pred EEEEEC-CHHHHHHHHHHhcCCEEee
Confidence 444443 3448899999669998753
No 218
>COG0346 GloA Lactoylglutathione lyase and related lyases [Amino acid transport and metabolism]
Probab=20.74 E-value=1.1e+02 Score=19.85 Aligned_cols=31 Identities=26% Similarity=0.424 Sum_probs=21.0
Q ss_pred CcEEEEEEecCcHHHHHHHhhhcCceEeceee
Q 028270 104 AEYVSLHVRKSNRAAFNLYTETLGYKIHDVEA 135 (211)
Q Consensus 104 ~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~~ 135 (211)
+..+.+.|.. -.+++.||+..+||+......
T Consensus 3 l~hv~l~v~d-l~~s~~FY~~~LG~~~~~~~~ 33 (138)
T COG0346 3 IHHVTLAVPD-LEASIDFYTDVLGLRLVKDTV 33 (138)
T ss_pred eEEEEEeeCC-HhHhHHHHHhhcCCeeeeecc
Confidence 3345555554 347899998769999887543
No 219
>cd07250 HPPD_C_like C-terminal domain of 4-hydroxyphenylpyruvate dioxygenase (HppD) and hydroxymandelate Synthase (HmaS). HppD and HmaS are non-heme iron-dependent dioxygenases, which modify a common substrate, 4-hydroxyphenylpyruvate (HPP), but yield different products. HPPD catalyzes the second reaction in tyrosine catabolism, the conversion of 4-hydroxyphenylpyruvate to homogentisate (2,5-dihydroxyphenylacetic acid, HG). HmaS converts HPP to 4-hydroxymandelate, a committed step in the formation of hydroxyphenylglycerine, a structural component of nonproteinogenic macrocyclic peptide antibiotics, such as vancomycin. If the emphasis is on catalytic chemistry, HPPD and HmaS are classified as members of a large family of alpha-keto acid dependent mononuclear non-heme iron oxygenases most of which require Fe(II), molecular oxygen, and an alpha-keto acid (typically alpha-ketoglutarate) to either oxygenate or oxidize a third substrate. Both enzymes are exceptions in that they require two,
Probab=20.71 E-value=97 Score=23.22 Aligned_cols=31 Identities=16% Similarity=0.187 Sum_probs=20.3
Q ss_pred CcEEEEEEecCc-HHHHHHHhhhcCceEecee
Q 028270 104 AEYVSLHVRKSN-RAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 104 ~~~i~l~v~~~N-~~a~~~Y~k~~GF~~~~~~ 134 (211)
++-+.+.|...+ ..++.||++.+||+.....
T Consensus 4 iDHv~i~V~~~dl~~a~~fY~~~LGf~~~~~~ 35 (191)
T cd07250 4 IDHVVGNVPDGEMDSWVDFYRKVLGFHRFWSF 35 (191)
T ss_pred eeEEEeecChhHHHHHHHHHHHhhCCceeeEE
Confidence 444555555223 3789999776999987644
No 220
>cd08357 Glo_EDI_BRP_like_18 This conserved domain belongs to a superfamily including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. This protein family belongs to a conserved domain superfamily that is found in a variety of structurally related metalloproteins, including the bleomycin resistance protein, glyoxalase I, and type I ring-cleaving dioxygenases. A bound metal ion is required for protein activities for the members of this superfamily. A variety of metal ions have been found in the catalytic centers of these proteins including Fe(II), Mn(II), Zn(II), Ni(II) and Mg(II). The protein superfamily contains members with or without domain swapping. The proteins of this family share three conserved metal binding amino acids with the type I extradiol dioxygenases, which shows no domain swapping.
Probab=20.59 E-value=1.6e+02 Score=19.38 Aligned_cols=18 Identities=33% Similarity=0.390 Sum_probs=14.2
Q ss_pred HHHHHHHhhhcCceEece
Q 028270 116 RAAFNLYTETLGYKIHDV 133 (211)
Q Consensus 116 ~~a~~~Y~k~~GF~~~~~ 133 (211)
.++++||++.+||++...
T Consensus 11 ~~s~~FY~~~lG~~~~~~ 28 (125)
T cd08357 11 EAARAFYGDVLGCKEGRS 28 (125)
T ss_pred HHHHHHHHHhcCCEEeec
Confidence 378999986589998654
No 221
>TIGR00505 ribA GTP cyclohydrolase II. Several members of the family are bifunctional, involving both ribA and ribB function. In these cases, ribA tends to be on the C-terminal end of the protein and ribB tends to be on the N-terminal. The function of archaeal members of the family has not been demonstrated and is assigned tentatively.
Probab=20.56 E-value=2.3e+02 Score=21.37 Aligned_cols=46 Identities=17% Similarity=0.334 Sum_probs=33.9
Q ss_pred cCCccccCHHHHHHHHHHHHHHHhcCCcEEEEEEecCcHHHHHHHhhhcCceEecee
Q 028270 78 LRTHRKLGLATKLMNAAQSAMEQVFGAEYVSLHVRKSNRAAFNLYTETLGYKIHDVE 134 (211)
Q Consensus 78 ~p~~rg~Gig~~Ll~~~~~~~~~~~g~~~i~l~v~~~N~~a~~~Y~k~~GF~~~~~~ 134 (211)
.+++|..|+|.++|. . +|++++.|.+. |+.-+.-.+. +|..+++..
T Consensus 121 ~~d~R~yGiGAQIL~-------d-LGV~~~rLLtn--~~~k~~~L~g-~gleVv~~~ 166 (191)
T TIGR00505 121 PADERDFSLCADILE-------D-LGVKKVRLLTN--NPKKIEILKK-AGINIVERV 166 (191)
T ss_pred cccceehhHHHHHHH-------H-cCCCEEEECCC--CHHHHHHHHh-CCCEEEEEe
Confidence 456999999999875 2 79999887755 4434555668 898888754
Done!