Query 028277
Match_columns 211
No_of_seqs 192 out of 1503
Neff 7.7
Searched_HMMs 29240
Date Mon Mar 25 14:42:18 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028277.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028277hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1u79_A FKBP-type peptidyl-prol 100.0 9.4E-29 3.2E-33 187.5 11.4 125 81-205 4-128 (129)
2 2y78_A Peptidyl-prolyl CIS-tra 100.0 1.2E-27 4E-32 182.5 15.7 114 81-205 20-133 (133)
3 1yat_A FK506 binding protein; 100.0 9.1E-28 3.1E-32 177.8 14.7 111 85-206 2-113 (113)
4 1jvw_A Macrophage infectivity 100.0 5.3E-28 1.8E-32 191.0 12.1 118 79-209 27-145 (167)
5 4dip_A Peptidyl-prolyl CIS-tra 99.9 2.2E-27 7.4E-32 178.9 13.7 115 83-209 6-125 (125)
6 2lgo_A FKBP; infectious diseas 99.9 2.3E-27 7.8E-32 180.2 13.3 114 81-205 14-130 (130)
7 3oe2_A Peptidyl-prolyl CIS-tra 99.9 2.6E-27 8.8E-32 194.1 14.0 120 72-207 100-219 (219)
8 2ppn_A FK506-binding protein 1 99.9 3.2E-27 1.1E-31 173.1 13.0 106 90-206 1-107 (107)
9 3kz7_A FK506-binding protein 3 99.9 4.7E-27 1.6E-31 175.4 13.9 110 87-206 2-119 (119)
10 1fd9_A Protein (macrophage inf 99.9 2.9E-27 1E-31 193.4 13.7 119 77-208 94-212 (213)
11 3o5e_A Peptidyl-prolyl CIS-tra 99.9 5E-27 1.7E-31 181.2 14.3 111 86-207 32-143 (144)
12 3o5q_A Peptidyl-prolyl CIS-tra 99.9 3.7E-27 1.3E-31 178.4 13.3 111 86-207 16-127 (128)
13 2vn1_A 70 kDa peptidylprolyl i 99.9 2.4E-26 8.1E-31 174.1 14.8 117 81-208 7-128 (129)
14 3b7x_A FK506-binding protein 6 99.9 4.3E-27 1.5E-31 179.5 10.5 113 84-207 21-134 (134)
15 3uf8_A Ubiquitin-like protein 99.9 2.1E-26 7.2E-31 188.0 15.4 112 83-205 98-209 (209)
16 2f4e_A ATFKBP42; FKBP-like, al 99.9 3.2E-26 1.1E-30 182.9 15.5 121 81-210 41-163 (180)
17 2lkn_A AH receptor-interacting 99.9 3E-27 1E-31 185.9 8.7 119 86-210 7-161 (165)
18 1r9h_A FKB-6, FK506 binding pr 99.9 2.7E-26 9.2E-31 175.3 13.1 111 87-208 12-123 (135)
19 1q6h_A FKBP-type peptidyl-prol 99.9 2.4E-26 8.3E-31 189.2 13.8 114 79-206 111-224 (224)
20 2jwx_A FKBP38NTD, FK506-bindin 99.9 3.6E-26 1.2E-30 178.7 13.6 111 84-209 37-151 (157)
21 2awg_A 38 kDa FK-506 binding p 99.9 2E-25 6.9E-30 166.5 14.0 109 84-207 7-118 (118)
22 2d9f_A FK506-binding protein 8 99.9 3.5E-25 1.2E-29 169.1 11.1 113 83-210 10-126 (135)
23 2pbc_A FK506-binding protein 2 99.9 3.7E-24 1.3E-28 155.5 11.3 99 101-210 3-101 (102)
24 1q1c_A FK506-binding protein 4 99.9 2.9E-23 1E-27 176.3 15.3 110 87-207 49-159 (280)
25 1kt0_A FKBP51, 51 kDa FK506-bi 99.9 9.1E-23 3.1E-27 183.0 10.8 111 86-207 28-139 (457)
26 2if4_A ATFKBP42; FKBP-like, al 99.9 4E-22 1.4E-26 172.2 13.0 119 82-209 42-162 (338)
27 3jxv_A 70 kDa peptidyl-prolyl 99.9 3.7E-24 1.3E-28 187.4 -0.3 114 84-208 6-120 (356)
28 3jxv_A 70 kDa peptidyl-prolyl 99.9 1.8E-21 6.1E-26 170.4 13.6 112 87-207 242-355 (356)
29 1q1c_A FK506-binding protein 4 99.8 8.2E-20 2.8E-24 155.1 13.7 108 87-210 166-277 (280)
30 4dt4_A FKBP-type 16 kDa peptid 99.8 1.8E-18 6.3E-23 136.3 9.9 72 103-180 24-95 (169)
31 1hxv_A Trigger factor; FKBP fo 99.7 2.3E-18 8E-23 127.4 7.3 87 101-206 27-113 (113)
32 3pr9_A FKBP-type peptidyl-prol 99.7 1.3E-17 4.6E-22 130.0 9.3 71 104-181 2-85 (157)
33 2kr7_A FKBP-type peptidyl-prol 99.7 6.5E-17 2.2E-21 125.4 12.1 73 102-181 5-78 (151)
34 2k8i_A SLYD, peptidyl-prolyl C 99.7 1E-16 3.4E-21 126.7 12.9 70 104-180 3-72 (171)
35 2kfw_A FKBP-type peptidyl-prol 99.7 1.2E-16 4E-21 128.9 11.8 71 104-181 3-73 (196)
36 1ix5_A FKBP; ppiase, isomerase 99.7 2.4E-17 8.2E-22 127.9 7.2 72 104-181 2-86 (151)
37 3prb_A FKBP-type peptidyl-prol 99.7 7.7E-17 2.6E-21 132.8 10.3 98 104-208 2-151 (231)
38 1p5q_A FKBP52, FK506-binding p 99.6 2.1E-15 7.1E-20 129.8 14.6 109 85-209 21-133 (336)
39 3cgm_A SLYD, peptidyl-prolyl C 99.6 2.4E-15 8.2E-20 117.4 9.7 65 104-180 3-67 (158)
40 1w26_A Trigger factor, TF; cha 99.4 3E-13 1E-17 121.1 9.5 89 100-207 154-242 (432)
41 1kt0_A FKBP51, 51 kDa FK506-bi 99.3 1.3E-11 4.4E-16 110.4 13.4 107 87-209 144-254 (457)
42 1t11_A Trigger factor, TF; hel 99.3 2.1E-12 7.3E-17 114.2 4.7 88 101-207 158-245 (392)
43 3gty_X Trigger factor, TF; cha 97.9 1.6E-05 5.6E-10 70.9 7.3 75 103-208 154-228 (433)
44 3isy_A Bsupi, intracellular pr 64.5 22 0.00074 25.6 6.4 33 106-138 16-48 (120)
45 2lkt_A Retinoic acid receptor 38.8 34 0.0012 24.2 3.9 25 102-126 6-36 (125)
46 2p4v_A Transcription elongatio 33.2 84 0.0029 23.3 5.5 23 144-172 121-143 (158)
47 2f23_A Anti-cleavage anti-GREA 30.7 69 0.0024 23.7 4.6 22 145-172 123-144 (156)
48 1zc1_A Ubiquitin fusion degrad 24.0 1.7E+02 0.006 22.9 6.0 73 104-209 106-180 (208)
49 1grj_A GREA protein; transcrip 22.1 90 0.0031 23.1 3.9 22 145-172 124-145 (158)
50 3htx_A HEN1; HEN1, small RNA m 22.0 1.2E+02 0.0043 29.3 5.5 61 104-170 561-649 (950)
51 2yuj_A Ubiquitin fusion degrad 20.1 1.6E+02 0.0055 22.7 5.0 72 104-209 101-175 (190)
No 1
>1u79_A FKBP-type peptidyl-prolyl CIS-trans isomerase 3; TFKBP13, FK-506 binding protein; 1.85A {Arabidopsis thaliana} SCOP: d.26.1.1 PDB: 1y0o_A
Probab=99.96 E-value=9.4e-29 Score=187.49 Aligned_cols=125 Identities=58% Similarity=1.103 Sum_probs=112.2
Q ss_pred CCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCc
Q 028277 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (211)
Q Consensus 81 ~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m 160 (211)
..++.++++|++|+++++|+|..++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.|+++|++|
T Consensus 4 ~~~~~~~~~Gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~~i~G~~~~L~G~~~~~~m 83 (129)
T 1u79_A 4 SCEFSVSPSGLAFCDKVVGYGPEAVKGQLIKAHYVGKLENGKVFDSSYNRGKPLTFRIGVGEVIKGWDQGILGSDGIPPM 83 (129)
T ss_dssp -CCCEECTTSCEEEEEECCSSCBCCTTCEEEEEEEEECTTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHHCBTTBCCC
T ss_pred CCccEECCCCeEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCCccHHHHHHhccccccccc
Confidence 45688999999999999999999999999999999999999999999876789999999999999999999987889999
Q ss_pred ccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 028277 161 HVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGI 205 (211)
Q Consensus 161 ~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i 205 (211)
++|++++|+||++++||..+....++.+.||||++|+|+|+|++|
T Consensus 84 ~~Ge~~~v~ip~~~aYG~~~~~~~~~~~~Ip~~~~l~f~vel~~i 128 (129)
T 1u79_A 84 LTGGKRTLRIPPELAYGDRGAGCKGGSCLIPPASVLLFDIEYIGK 128 (129)
T ss_dssp BTTCEEEEEECGGGTTGGGCEEEETTEEEECTTCCEEEEEEEEEE
T ss_pred CCCCEEEEEEChHHccCCCCCCccccCCcCCCCCeEEEEEEEEEe
Confidence 999999999999999999875210112279999999999999987
No 2
>2y78_A Peptidyl-prolyl CIS-trans isomerase; MIP, ppiase, virulence; HET: SO4 GOL; 0.91A {Burkholderia pseudomallei} PDB: 2ke0_A 2ko7_A* 2l2s_A* 4dz2_A* 4dz3_A*
Probab=99.95 E-value=1.2e-27 Score=182.51 Aligned_cols=114 Identities=46% Similarity=0.811 Sum_probs=107.1
Q ss_pred CCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCc
Q 028277 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (211)
Q Consensus 81 ~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m 160 (211)
...+.++++|++|+++++|+|..++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |
T Consensus 20 ~~~~~~~~~gl~~~~l~~G~G~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~eeaL~g------m 93 (133)
T 2y78_A 20 HMTVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG------M 93 (133)
T ss_dssp TTCCEECTTSCEEEEEECCSSCBCCTTSEEEEEEEEEETTSCEEEETTTTTCCEEEETTSSSSCHHHHHHSTT------C
T ss_pred CCCcEECCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCEEeccCcCCCCEEEEeCCCChhHHHHHHHcC------C
Confidence 3457889999999999999999999999999999999999999999998778999999999999999999999 9
Q ss_pred ccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 028277 161 HVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGI 205 (211)
Q Consensus 161 ~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i 205 (211)
++|++++|+||++++||..+..+ .||||++|+|+|||++|
T Consensus 94 k~Ge~~~v~ip~~~aYG~~~~~~-----~Ipp~~~l~f~VeL~~I 133 (133)
T 2y78_A 94 KVGGVRRLTIPPQLGYGARGAGG-----VIPPNATLVFEVELLDV 133 (133)
T ss_dssp BTTCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEC
T ss_pred CCCCEEEEEECcHHhCCCCCCCC-----CCCCCCeEEEEEEEEEC
Confidence 99999999999999999988753 69999999999999986
No 3
>1yat_A FK506 binding protein; HET: FK5; 2.50A {Saccharomyces cerevisiae} SCOP: d.26.1.1
Probab=99.95 E-value=9.1e-28 Score=177.84 Aligned_cols=111 Identities=39% Similarity=0.679 Sum_probs=104.5
Q ss_pred eecCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccC
Q 028277 85 SFARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVG 163 (211)
Q Consensus 85 ~~~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G 163 (211)
..+++|++|+++++|+|.. ++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |++|
T Consensus 2 ~~~~~g~~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~e~~l~g------m~~G 75 (113)
T 1yat_A 2 EVIEGNVKIDRISPGDGATFPKTGDLVTIHYTGTLENGQKFDSSVDRGSPFQCNIGVGQVIKGWDVGIPK------LSVG 75 (113)
T ss_dssp EECGGGCEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEESTTTTCCEEEETTSSSSCHHHHHHGGG------CCTT
T ss_pred CCCCCCeEEEEEECCCCcccCCCCCEEEEEEEEEECCCCEEEecCCCCCcEEEEeCCCCccHHHHHHHhC------CCCC
Confidence 3678999999999999998 99999999999999999999999998778999999999999999999999 9999
Q ss_pred cEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 028277 164 GKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIY 206 (211)
Q Consensus 164 ~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~ 206 (211)
++++|.||++++||..+..+ .||||++|+|+|+|++|+
T Consensus 76 e~~~v~ip~~~ayG~~~~~~-----~Ip~~~~l~f~vel~~ik 113 (113)
T 1yat_A 76 EKARLTIPGPYAYGPRGFPG-----LIPPNSTLVFDVELLKVN 113 (113)
T ss_dssp CEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEC
T ss_pred CEEEEEECHHHCcCCCCCCC-----CcCCCCeEEEEEEEEEeC
Confidence 99999999999999988653 699999999999999984
No 4
>1jvw_A Macrophage infectivity potentiator; chagas disease, X-RAY rotamase, isomeras; 1.70A {Trypanosoma cruzi} SCOP: d.26.1.1
Probab=99.95 E-value=5.3e-28 Score=191.00 Aligned_cols=118 Identities=36% Similarity=0.580 Sum_probs=109.0
Q ss_pred CCCCCeeecCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCC
Q 028277 79 DPPCEFSFARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGV 157 (211)
Q Consensus 79 ~~~~~~~~~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~ 157 (211)
.....+.++++|++|+++++|+|.. |+.||.|+|||++++.||++|++++.++.|+.|.+ +++|+||+++|.+
T Consensus 27 ~~~~~~~~~~sGl~~~vl~~G~G~~~~~~gd~V~v~Y~g~l~dG~~fdss~~~g~p~~f~l--g~vI~G~eeaL~g---- 100 (167)
T 1jvw_A 27 AAQPDAVKLPSGLVFQRIARGSGKRAPAIDDKCEVHYTGRLRDGTVFDSSRERGKPTTFRP--NEVIKGWTEALQL---- 100 (167)
T ss_dssp HHSTTEEECTTSCEEEEEECCCCSBCCCTTCCEEEEEEEECTTSCEEEEHHHHTSCEEECG--GGSCHHHHHHHTT----
T ss_pred ccCCCcEECCCCEEEEEEEcCCCCcCCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEe--CchhHHHHHHHcC----
Confidence 3345788999999999999999999 99999999999999999999999998778999999 5899999999999
Q ss_pred CCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 158 PPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 158 ~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
|++|++++|+||++++||..+..+ .||||++|+|+|+|++|++.+
T Consensus 101 --Mk~Ge~~~~~Ip~~laYG~~g~~~-----~Ipp~s~LiF~VeL~~i~~~~ 145 (167)
T 1jvw_A 101 --MREGDRWRLFIPYDLAYGVTGGGG-----MIPPYSPLEFDVELISIKDGG 145 (167)
T ss_dssp --CCTTCEEEEEECGGGTTTTTCSSS-----SSCTTCCEEEEEEEEEEGGGC
T ss_pred --CCCCCEEEEEECchhhCCCCCCCC-----CcCCCCeEEEEEEEEEEEcCC
Confidence 999999999999999999998653 799999999999999998654
No 5
>4dip_A Peptidyl-prolyl CIS-trans isomerase FKBP14; structural genomics, structural genomics consortium, SGC, PE prolyl CIS-trans isomerase; 1.82A {Homo sapiens}
Probab=99.95 E-value=2.2e-27 Score=178.88 Aligned_cols=115 Identities=35% Similarity=0.613 Sum_probs=106.4
Q ss_pred CeeecCCccEEEEEecCC--CCCCCCCCEEEEEEEEEEc-CCcEEecccC--CCCceEEeccCCcccHHHHHHHcCCCCC
Q 028277 83 EFSFARSGLGYCDIASGS--GVEAPYGELINVHYTARFA-DGIIFDSSYK--RARPLTMRIGVGKVIKGLDQGILGGDGV 157 (211)
Q Consensus 83 ~~~~~~~G~~~~~l~~G~--G~~~~~gd~V~v~y~~~~~-~G~~~~st~~--~~~p~~~~lg~~~~i~g~~~al~g~~~~ 157 (211)
+...+++|++|+++++|+ |..++.||.|++||++++. ||++|+++++ .++|+.|.+|.+++++||+++|.+
T Consensus 6 ~~~~~~~gl~~~~l~~g~~~g~~~~~gd~V~v~Y~g~~~~dG~~fdss~~~~~~~p~~f~lG~~~~i~G~e~~l~g---- 81 (125)
T 4dip_A 6 GALIPEPEVKIEVLQKPFICHRKTKGGDLMLVHYEGYLEKDGSLFHSTHKHNNGQPIWFTLGILEALKGWDQGLKG---- 81 (125)
T ss_dssp GGGCCCCCCEEEEEECCSCCSCCCCTTCEEEEEEEEEETTTCCEEEEHHHHTTTCCEEEETTSCSSCHHHHHHSTT----
T ss_pred ceEECCCCeEEEEEEcCCCCCCcCCCCCEEEEEEEEEECCCCcEEEEcccCCCCcCEEEEeCCCChhHHHHHHHhC----
Confidence 345788999999999998 7889999999999999998 9999999984 468999999999999999999999
Q ss_pred CCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 158 PPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 158 ~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
|++|++++|+||++++||..+.. .||||++|+|+|||++|++.+
T Consensus 82 --m~~Ge~~~~~ip~~~aYG~~g~~------~Ip~~~~l~f~vel~~i~~~P 125 (125)
T 4dip_A 82 --MCVGEKRKLIIPPALGYGKEGKG------KIPPESTLIFNIDLLEIRNGP 125 (125)
T ss_dssp --CCTTCEEEEEECGGGTTTTTCBT------TBCTTCCEEEEEEEEEEECCC
T ss_pred --CCCCCEEEEEEChHHhcCCCCCC------CCCCCCeEEEEEEEEEEEcCC
Confidence 99999999999999999999865 899999999999999998754
No 6
>2lgo_A FKBP; infectious disease, isomerase, giardiasis, ssgcid, structura genomics, seattle structural genomics center for infectious; NMR {Giardia lamblia}
Probab=99.95 E-value=2.3e-27 Score=180.20 Aligned_cols=114 Identities=36% Similarity=0.610 Sum_probs=106.6
Q ss_pred CCCeeecCCccEEE--EEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCC
Q 028277 81 PCEFSFARSGLGYC--DIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGV 157 (211)
Q Consensus 81 ~~~~~~~~~G~~~~--~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~ 157 (211)
...+..+++|++|+ ++++|+|.. ++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+
T Consensus 14 ~~~~~~~~~Gl~~~K~~l~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~g---- 89 (130)
T 2lgo_A 14 AQTQGPGSMSAQLEKKVLTPGDGVTKPQAGKKVTVHYDGRFPDGKQFDSSRSRGKPFQFTLGAGEVIKGWDQGVAT---- 89 (130)
T ss_dssp CSSCSSSSSSCCCCEEEEECCCSSCCCCTTSEEEEEEEEECTTSCEEECTTTTTCCEEEETTSTTSCHHHHHHHHH----
T ss_pred cccceeCCCceEEEEEEEeccCCCccCCCCCEEEEEEEEEECCCCEEEccCcCCCCEEEEeCCCCccHHHHHHHhC----
Confidence 34577899999999 999999998 99999999999999999999999998778999999999999999999999
Q ss_pred CCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 028277 158 PPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGI 205 (211)
Q Consensus 158 ~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i 205 (211)
|++|++++|.||++++||..+.++ .||||++|+|+|+|++|
T Consensus 90 --m~~Ge~~~v~ip~~~aYG~~~~~~-----~Ip~~~~l~f~VeL~~i 130 (130)
T 2lgo_A 90 --MTLGEKALFTIPYQLAYGERGYPP-----VIPPKATLVFEVELLAV 130 (130)
T ss_dssp --SCTTEEEEEEECTTTSTTTTCCST-----TSCSSCCEEEEEEEEEC
T ss_pred --CCCCCEEEEEECcHHHCCCCCCCC-----CcCCCCeEEEEEEEEEC
Confidence 999999999999999999988653 69999999999999986
No 7
>3oe2_A Peptidyl-prolyl CIS-trans isomerase; FKBP, ppiase, FK506; HET: TAR SRT; 1.60A {Pseudomonas syringae PV} SCOP: d.26.1.0
Probab=99.95 E-value=2.6e-27 Score=194.12 Aligned_cols=120 Identities=28% Similarity=0.484 Sum_probs=108.8
Q ss_pred hhhhccCCCCCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHH
Q 028277 72 EYYATTADPPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGI 151 (211)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al 151 (211)
+.+...+.....++++++|++|+++++|+|..|..||.|+|||++++.||++|+++ +.|+.|.+| ++|+||+++|
T Consensus 100 ~~fl~~n~~~~gv~~~~sGl~y~vl~~G~G~~p~~gd~V~V~Y~g~l~dG~vfDss---~~P~~f~lG--~vI~G~eeaL 174 (219)
T 3oe2_A 100 RTFMAGEKAKPGVKELADGILMTELTPGTGPKPDANGRVEVRYVGRLPDGKIFDQS---TQPQWFRLD--SVISGWTSAL 174 (219)
T ss_dssp HHHHHHHHTSTTCEECGGGCEEEEEECCCSCCCCTTSEEEEEEEEECTTSCEEEEC---SSCEEEEGG--GSCHHHHHHH
T ss_pred HHHHHHhccCCCcEECCCCeEEEEEecCCCccCCCCCEEEEEEEEEECCCCEeecc---CCcEEEEec--chhHHHHHHH
Confidence 34444445566788999999999999999999999999999999999999999999 589999996 8999999999
Q ss_pred cCCCCCCCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 152 LGGDGVPPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 152 ~g~~~~~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
.+ |++|++++|+||++++||..+..+ .||||++|+|+|||++|+.
T Consensus 175 ~g------Mk~Gek~~v~IPp~lAYG~~g~~~-----~IPpnstLvFeVeLl~Ik~ 219 (219)
T 3oe2_A 175 QN------MPTGAKWRLVIPSDQAYGAEGAGD-----LIDPFTPLVFEIELIAVSQ 219 (219)
T ss_dssp TT------CCTTCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred hC------CCCCCEEEEEECchhcCCCCCCCC-----CCCCCCeEEEEEEEEEEeC
Confidence 99 999999999999999999998763 6999999999999999963
No 8
>2ppn_A FK506-binding protein 1A; high resolution protein structure, isomerase; 0.92A {Homo sapiens} SCOP: d.26.1.1 PDB: 1b6c_A 1a7x_A 1d7h_A 1d7i_A 1d7j_A* 1f40_A* 1fap_A* 1d6o_A* 1fkd_A* 1fkf_A* 1fkg_A* 1fkh_A* 1fki_A* 1fkj_A* 1fkr_A 1fks_A 1fkt_A 1j4h_A* 1j4i_A* 1j4r_A* ...
Probab=99.95 E-value=3.2e-27 Score=173.10 Aligned_cols=106 Identities=37% Similarity=0.642 Sum_probs=100.2
Q ss_pred ccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEE
Q 028277 90 GLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKL 168 (211)
Q Consensus 90 G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v 168 (211)
|++|+++++|+|.. ++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |++|++++|
T Consensus 1 Gl~~~~~~~G~g~~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~g------m~~Ge~~~~ 74 (107)
T 2ppn_A 1 GVQVETISPGDGRTFPKRGQTCVVHYTGMLEDGKKFDSSRDRNKPFKFMLGKQEVIRGWEEGVAQ------MSVGQRAKL 74 (107)
T ss_dssp CEEEEEEECCCSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSCCSCHHHHHHHTT------CCTTCEEEE
T ss_pred CcEEEEEECcCCCcCCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEeCCCChHHHHHHHHhC------CCCCCEEEE
Confidence 78999999999998 99999999999999999999999987668999999999999999999999 999999999
Q ss_pred EECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 028277 169 QIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIY 206 (211)
Q Consensus 169 ~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~ 206 (211)
.||++++||..+.++ .||||++|+|+|+|++|+
T Consensus 75 ~ip~~~ayG~~~~~~-----~Ip~~~~l~f~v~l~~v~ 107 (107)
T 2ppn_A 75 TISPDYAYGATGHPG-----IIPPHATLVFDVELLKLE 107 (107)
T ss_dssp EECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEC
T ss_pred EECHHHccCCCCCCC-----CcCCCCeEEEEEEEEEeC
Confidence 999999999988653 799999999999999984
No 9
>3kz7_A FK506-binding protein 3; FKPB ppiase rapamycin, isomerase, nucleus, phosphoprotein, R isomerase-inhibitor complex; HET: RAP; 1.95A {Mus musculus} SCOP: d.26.1.1 PDB: 1pbk_A*
Probab=99.95 E-value=4.7e-27 Score=175.41 Aligned_cols=110 Identities=33% Similarity=0.656 Sum_probs=101.5
Q ss_pred cCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCC-------CCceEEeccCCcccHHHHHHHcCCCCCC
Q 028277 87 ARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKR-------ARPLTMRIGVGKVIKGLDQGILGGDGVP 158 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~-------~~p~~~~lg~~~~i~g~~~al~g~~~~~ 158 (211)
.|+|++|+++++|+|.. |+.||.|++||++++.||++|++++.. +.|+.|.+|.+++++||+++|.+
T Consensus 2 ~p~g~~~~il~~G~g~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~~~~~~~~p~~f~lG~~~~i~G~e~~l~g----- 76 (119)
T 3kz7_A 2 GPPKYTKSILKKGDKTNFPKKGDVVHCWYTGTLPDGTVFDTNIQTSSKKKKNAKPLSFKVGVGKVIRGWDEALLT----- 76 (119)
T ss_dssp CSCSEEEEEEECCCSSCCCCTTCEEEEEEEEECTTSCEEEECCCCSSSTTTTCCCEEEETTSSSSCHHHHHHHTT-----
T ss_pred CCCccEEEEEEcCCCCCcCCCCCEEEEEEEEEECCCCEEEeccccccccccCCCCEEEEECCCChhHHHHHHHhC-----
Confidence 58999999999999975 999999999999999999999999863 47999999999999999999999
Q ss_pred CcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 028277 159 PMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIY 206 (211)
Q Consensus 159 ~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~ 206 (211)
|++|++++|+||++++||..+... ..||||++|+|+|+|++|.
T Consensus 77 -m~~Ge~~~v~ip~~~aYG~~g~~~----~~Ip~~~~l~f~veL~~i~ 119 (119)
T 3kz7_A 77 -MSKGEKARLEIEPEWAYGKKGQPD----AKIPPNTKLIFEVELVDID 119 (119)
T ss_dssp -CCTTCEEEEEECGGGTTCTTCBGG----GTBCTTCCEEEEEEEEEEC
T ss_pred -CCCCCEEEEEECcHHhcCCCCCCC----CccCcCCeEEEEEEEEEeC
Confidence 999999999999999999998641 2699999999999999974
No 10
>1fd9_A Protein (macrophage infectivity potentiator prote; FKBP domain, long alpha helix, dimerisation VIA helical INTE isomerase; 2.41A {Legionella pneumophila} SCOP: d.26.1.1 PDB: 2uz5_A 2vcd_A*
Probab=99.95 E-value=2.9e-27 Score=193.44 Aligned_cols=119 Identities=32% Similarity=0.568 Sum_probs=109.4
Q ss_pred cCCCCCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCC
Q 028277 77 TADPPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDG 156 (211)
Q Consensus 77 ~~~~~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~ 156 (211)
.+.....+.++++|++|+++++|+|..|+.||.|+|||++++.||++|++++.++.|+.|.+ +++|+||+++|.+
T Consensus 94 ~~~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~g--- 168 (213)
T 1fd9_A 94 ENKNKPGVVVLPSGLQYKVINSGNGVKPGKSDTVTVEYTGRLIDGTVFDSTEKTGKPATFQV--SQVIPGWTEALQL--- 168 (213)
T ss_dssp HHHHSTTEEECTTSCEEEEEECCCSCCCCTTCEEEEEEEEEETTSCEEEEHHHHCSCEEEEG--GGSCHHHHHHHTT---
T ss_pred HhcccCCcEECCCccEEEEEecCCCccCCCCCEEEEEEEEEECCCCEEeeccccCCCEEEEc--CchhhHHHHHHcC---
Confidence 33445678999999999999999999999999999999999999999999998778999999 5899999999999
Q ss_pred CCCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecC
Q 028277 157 VPPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSG 208 (211)
Q Consensus 157 ~~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~ 208 (211)
|++|++++|+||++++||..+..+ .||||++|+|+|+|++|++.
T Consensus 169 ---Mk~Gek~~v~IP~~laYG~~g~~~-----~Ipp~stLiF~VeLl~v~~~ 212 (213)
T 1fd9_A 169 ---MPAGSTWEIYVPSGLAYGPRSVGG-----PIGPNETLIFKIHLISVKKS 212 (213)
T ss_dssp ---CCTTCEEEEEECGGGTTTTCCCSS-----SCCTTCCEEEEEEEEEEECC
T ss_pred ---CCCCCEEEEEECchhccCccCCCC-----CCCCCCeEEEEEEEEEEEcC
Confidence 999999999999999999988643 79999999999999999864
No 11
>3o5e_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 1.60A {Homo sapiens} PDB: 3o5f_A
Probab=99.95 E-value=5e-27 Score=181.23 Aligned_cols=111 Identities=32% Similarity=0.516 Sum_probs=104.8
Q ss_pred ecCCccEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCc
Q 028277 86 FARSGLGYCDIASGSGV-EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGG 164 (211)
Q Consensus 86 ~~~~G~~~~~l~~G~G~-~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~ 164 (211)
..++|++|+++++|+|. .|+.||.|+|||++++.||++|++++++++|+.|.+|.+++|+||+++|.+ |++|+
T Consensus 32 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~g------m~~Ge 105 (144)
T 3o5e_A 32 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT------MKKGE 105 (144)
T ss_dssp SCSSSEEEEEEECCBSSCCCCTTCEEEEEEEEECTTSCEEEESGGGTSCEEEETTSSSSCHHHHHHHTT------CCBTC
T ss_pred cCCCeEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEeecccCCCeEEEeCCCcccHHHHHHHhC------CCCCC
Confidence 46889999999999998 599999999999999999999999998889999999999999999999999 99999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 165 KRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 165 ~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
+++|+||++++||..+..+ .||||++|+|+|+|++|+.
T Consensus 106 ~~~v~ipp~~aYG~~g~~~-----~Ipp~~~L~f~VeL~~ikg 143 (144)
T 3o5e_A 106 ICHLLCKPEYAYGSAGSLP-----KIPSNATLFFEIELLDFKG 143 (144)
T ss_dssp EEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHCcCCCCCCC-----CcCCCCeEEEEEEEEEecC
Confidence 9999999999999998753 8999999999999999973
No 12
>3o5q_A Peptidyl-prolyl CIS-trans isomerase FKBP5; FK-506 binding domain, HSP90 cochaperone, immunophiline, PEP prolyl isomerase; 0.96A {Homo sapiens} PDB: 3o5m_A 3o5l_A 3o5o_A 3o5p_A 3o5r_A* 4drk_A* 4drm_A* 4drn_A* 4dro_A* 4drp_A* 4drq_A* 3o5j_A 3o5g_A 3o5i_A 3o5k_A
Probab=99.95 E-value=3.7e-27 Score=178.42 Aligned_cols=111 Identities=32% Similarity=0.516 Sum_probs=104.5
Q ss_pred ecCCccEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCc
Q 028277 86 FARSGLGYCDIASGSGV-EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGG 164 (211)
Q Consensus 86 ~~~~G~~~~~l~~G~G~-~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~ 164 (211)
..++|++|+++++|+|. .|+.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |++|+
T Consensus 16 ~~d~gv~~~i~~~G~G~~~p~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~~i~G~e~~l~g------m~~Ge 89 (128)
T 3o5q_A 16 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT------MKKGE 89 (128)
T ss_dssp SCSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTT------CCTTC
T ss_pred cCCCCEEEEEEECCCCCccCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHhc------CCCCC
Confidence 47789999999999998 589999999999999999999999988778999999999999999999999 99999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 165 KRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 165 ~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
+++|+||++++||..+..+ .||||++|+|+|+|++|+.
T Consensus 90 ~~~v~ip~~~aYG~~g~~~-----~Ip~~~~l~f~vel~~i~~ 127 (128)
T 3o5q_A 90 ICHLLCKPEYAYGSAGSLP-----KIPSNATLFFEIELLDFKG 127 (128)
T ss_dssp EEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHcCCCCCCCC-----CcCCCCEEEEEEEEEEecC
Confidence 9999999999999998753 8999999999999999974
No 13
>2vn1_A 70 kDa peptidylprolyl isomerase; FKBP, FK506, TPR repeat; HET: FK5; 2.35A {Plasmodium falciparum} PDB: 2ofn_A 2ki3_A 3ihz_A* 3ni6_A 3pa7_A
Probab=99.94 E-value=2.4e-26 Score=174.12 Aligned_cols=117 Identities=26% Similarity=0.450 Sum_probs=104.9
Q ss_pred CCCeeecCCccEE-EEEecC---CCCCCCCCCEEEEEEEEEE-cCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCC
Q 028277 81 PCEFSFARSGLGY-CDIASG---SGVEAPYGELINVHYTARF-ADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGD 155 (211)
Q Consensus 81 ~~~~~~~~~G~~~-~~l~~G---~G~~~~~gd~V~v~y~~~~-~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~ 155 (211)
...+..+++|+.| +++++| +|..++.||.|++||++++ .||++|+++++++.|+.|.+|.+++++||+++|.+
T Consensus 7 ~~~~~~~~~g~~~~~il~~G~~g~g~~~~~gd~V~v~Y~g~~~~dG~~fd~s~~~~~p~~f~lG~g~~i~g~e~~l~g-- 84 (129)
T 2vn1_A 7 FEKVELTADGGVIKTILKKGDEGEENIPKKGNEVTVHYVGKLESTGKVFDSSFDRNVPFKFHLEQGEVIKGWDICVSS-- 84 (129)
T ss_dssp CEEEECSTTSSEEEEEEECCCCSGGGSCCTTCEEEEEEEEEETTTCCEEEEGGGTTCCEEEETTSSSSCHHHHHHHTT--
T ss_pred cCCcEECCCCCEEEEEEeCCCCCCCCcCCCCCEEEEEEEEEECCCCeEEEecCCCCccEEEEeCCCCcCHHHHHHHhC--
Confidence 3456678888766 588965 5678999999999999999 79999999997778999999999999999999999
Q ss_pred CCCCcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecC
Q 028277 156 GVPPMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSG 208 (211)
Q Consensus 156 ~~~~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~ 208 (211)
|++|++++|+||++++||..+.++ .||||++|+|+|+|++|++.
T Consensus 85 ----m~~Ge~~~v~ip~~~aYG~~~~~~-----~Ip~~~~l~f~vel~~v~~~ 128 (129)
T 2vn1_A 85 ----MRKNEKCLVRIESMYGYGDEGCGE-----SIPGNSVLLFEIELLSFREL 128 (129)
T ss_dssp ----CCTTCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEECC
T ss_pred ----CCCCCEEEEEEChHHcCCCCCCCC-----CcCCCCeEEEEEEEEEEecC
Confidence 999999999999999999988653 79999999999999999864
No 14
>3b7x_A FK506-binding protein 6; isomerase, repeat, rotamase, TPR repeat, williams-beuren syndrome, structural genomics consortium, SGC; 2.10A {Homo sapiens}
Probab=99.94 E-value=4.3e-27 Score=179.53 Aligned_cols=113 Identities=25% Similarity=0.378 Sum_probs=97.9
Q ss_pred eeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCccc
Q 028277 84 FSFARSGLGYCDIASGSGVEAPYGELINVHYTARFA-DGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHV 162 (211)
Q Consensus 84 ~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~ 162 (211)
..++++|++|+++++|+|..++.||.|++||++++. ||++|++++.+++|+.|.+|.+++|+||+++|.+ |++
T Consensus 21 ~v~~~~gl~~~vl~~G~g~~~~~gd~V~v~Y~g~l~~~G~~fdss~~~~~p~~f~lG~g~~i~G~e~aL~g------m~~ 94 (134)
T 3b7x_A 21 DISGDRGVLKDVIREGAGDLVAPDASVLVKYSGYLEHMDRPFDSNYFRKTPRLMKLGEDITLWGMELGLLS------MRR 94 (134)
T ss_dssp ESSSSSSEEEEEEECCEEEECCTTCEEEEEEEEECTTCSSCSEEC-------CEEC-CCCCCHHHHHHHHT------CEE
T ss_pred eeeCCCCEEEEEEEcCCCCCCCCCCEEEEEEEEEECCCCeEEEecCCCCCCEEEEcCCcchhHHHHHHHhC------CCC
Confidence 445889999999999999999999999999999998 6999999997778999999999999999999999 999
Q ss_pred CcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 163 GGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 163 G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
|++++|+||++++||..+.++ .||||++|+|+|+|++|++
T Consensus 95 Ge~~~v~ip~~~aYG~~~~~~-----~Ip~~~~l~f~VeL~~i~d 134 (134)
T 3b7x_A 95 GELARFLFKPNYAYGTLGCPP-----LIPPNTTVLFEIELLDFLD 134 (134)
T ss_dssp TCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEC-
T ss_pred CCEEEEEECHHHCcCCCCCCC-----CcCcCCeEEEEEEEEEEeC
Confidence 999999999999999988753 6999999999999999863
No 15
>3uf8_A Ubiquitin-like protein SMT3, peptidyl-prolyl CIS- isomerase; ssgcid, seattle structural genomics center for in disease; HET: FK5; 1.50A {Burkholderia pseudomallei} PDB: 4ggq_C* 3vaw_A* 3uqa_A* 4g50_A* 4fn2_A* 3uqb_A* 4giv_A* 1euv_B 3v60_A 3v61_A 3v62_A*
Probab=99.94 E-value=2.1e-26 Score=188.01 Aligned_cols=112 Identities=46% Similarity=0.814 Sum_probs=106.7
Q ss_pred CeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCccc
Q 028277 83 EFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHV 162 (211)
Q Consensus 83 ~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~ 162 (211)
.+.++++|++|+++++|+|..++.||.|++||++++.||++|+++++.+.|+.|.+|.+++++||+++|.+ |++
T Consensus 98 t~~~~~sGl~~~vl~~G~G~~~~~gd~V~v~Y~g~l~dG~~fdss~~~~~P~~f~lG~g~vi~G~eeaL~g------M~~ 171 (209)
T 3uf8_A 98 TVVTTESGLKYEDLTEGSGAEARAGQTVSVHYTGWLTDGQKFDSSKDRNDPFAFVLGGGMVIKGWDEGVQG------MKV 171 (209)
T ss_dssp CCEECTTSCEEEEEECCCSCBCCTTCEEEEEEEEEETTSCEEEESGGGTCCEEEETTSSSSCHHHHHHHTT------CBT
T ss_pred cccCCCCceEEEEEEcCCCCcCCCCCEEEEEEEEEECCCCEEEEccccCCCEEEEeCCCccchhHHHHHhC------CCC
Confidence 47789999999999999999999999999999999999999999998889999999999999999999999 999
Q ss_pred CcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEee
Q 028277 163 GGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGI 205 (211)
Q Consensus 163 G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i 205 (211)
|++++|+||++++||..+..+ .||||++|+|+|||++|
T Consensus 172 Ge~~~v~Ipp~~aYG~~g~~~-----~IP~~s~LvF~VeL~~I 209 (209)
T 3uf8_A 172 GGVRRLTIPPQLGYGARGAAG-----VIPPNATLVFEVELLDV 209 (209)
T ss_dssp TCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEC
T ss_pred CCEEEEEECcHHhCCCCCCCC-----CcCCCCeEEEEEEEEEC
Confidence 999999999999999998763 69999999999999986
No 16
>2f4e_A ATFKBP42; FKBP-like, alpha-beta, signaling protein; 2.32A {Arabidopsis thaliana}
Probab=99.94 E-value=3.2e-26 Score=182.92 Aligned_cols=121 Identities=23% Similarity=0.360 Sum_probs=110.0
Q ss_pred CCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEc-CCcEEecccCCCCceEEeccCC-cccHHHHHHHcCCCCCC
Q 028277 81 PCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFA-DGIIFDSSYKRARPLTMRIGVG-KVIKGLDQGILGGDGVP 158 (211)
Q Consensus 81 ~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~lg~~-~~i~g~~~al~g~~~~~ 158 (211)
...+.++++|++|+++++|+|..++.||.|++||++++. +|++|++++.++.|+.|.+|.+ ++|+||+++|.+
T Consensus 41 ~~~~~~~~~gl~~~vl~~G~G~~~~~Gd~V~v~Y~g~l~~dG~~fdss~~~~~p~~f~lG~g~~vi~G~eeaL~g----- 115 (180)
T 2f4e_A 41 DSEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVAS----- 115 (180)
T ss_dssp CSCCEEEETTEEEEEEECCBSCCBCTTCEEEEEEEEEETTTCCEEEETTTTTCCEEEETTSCCGGGHHHHHHHTT-----
T ss_pred CCCcEECCCceEEEEEeCCCCCCCCCCCEEEEEEEEEECCCCcEEeccCccCCCEEEEeCCCCchhHHHHHHHhC-----
Confidence 345788999999999999999999999999999999998 5999999998888999999998 999999999999
Q ss_pred CcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCCC
Q 028277 159 PMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGNR 210 (211)
Q Consensus 159 ~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~~ 210 (211)
|++|++++|+||++++||..+... .+.||||++|+|+|+|++|++...
T Consensus 116 -Mk~Ge~~~v~iPp~~aYG~~g~~~---~~~Ip~~s~l~F~VeL~~v~~~~e 163 (180)
T 2f4e_A 116 -MKSGERALVHVGWELAYGKEGNFS---FPNVPPMADLLYEVEVIGFDETKE 163 (180)
T ss_dssp -CCBTCEEEEEECGGGTTTTTCBSS---SSCBCTTCCEEEEEEEEEESCBCC
T ss_pred -CCCCCEEEEEECchHhCCcCCccc---CCCcCCCCeEEEEEEEEEEecCcc
Confidence 999999999999999999988521 127999999999999999987653
No 17
>2lkn_A AH receptor-interacting protein; FKBP-type domain, immunophilin homolog, protein binding; NMR {Homo sapiens}
Probab=99.94 E-value=3e-27 Score=185.91 Aligned_cols=119 Identities=16% Similarity=0.177 Sum_probs=99.6
Q ss_pred ecCCccEEEEEecCCCCC--CCCCCEEEEEEEEEEc--CCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcc
Q 028277 86 FARSGLGYCDIASGSGVE--APYGELINVHYTARFA--DGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMH 161 (211)
Q Consensus 86 ~~~~G~~~~~l~~G~G~~--~~~gd~V~v~y~~~~~--~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~ 161 (211)
++.+||+|+++++|+|+. ++.||.|+|||++++. ||++||||+++++|+.|.+|.+++|+||+++|.+ |+
T Consensus 7 ~~~~Gv~~~vl~~G~G~~p~~~~G~~V~vhY~g~l~d~~G~~FDsS~~rg~P~~f~lG~g~vI~Gwd~gl~~------M~ 80 (165)
T 2lkn_A 7 LREDGIQKRVIQEGRGELPDFQDGTKATFHYRTLHSDDEGTVLDDSRARGKPMELIIGKKFKLPVWETIVCT------MR 80 (165)
T ss_dssp HHTTSCCCCEEECCSSCCCCCCTTCEEEEECEEECSSSSCCEEEESTTTTCCEEEESSSSCSCSHHHHHHTT------CC
T ss_pred ccCCCeEEEEEECCcCCCCCCCCCCEEEEEEEEEEeCCCccEEEecccCCCCEEEEecCCCccHHHHHHHhc------Cc
Confidence 578999999999999976 4689999999999986 5999999999999999999999999999999999 99
Q ss_pred cCcEEEEEECCCCCCCC--------CCCCC-CCCC-----------------------CCCCCCCeEEEEEEEEeeecCC
Q 028277 162 VGGKRKLQIPPELAYGP--------EPAGC-FSGD-----------------------CNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 162 ~G~~~~v~vp~~~~yg~--------~g~~~-~~~~-----------------------~~ip~~~~l~~~vel~~i~~~~ 209 (211)
+|++++|+|||+++||. ..... .|+. ..|+++++|+|+||||+|+++.
T Consensus 81 ~Ge~~~~~ipp~laYG~p~v~~~~r~~~~~~~p~~~~~~~~g~~~~~~~~~~g~~d~~~li~~p~~L~FeIELl~Ve~P~ 160 (165)
T 2lkn_A 81 EGEIAQFLCDIKHVVLYPLVAKSLRNIAVGKDPLEGQRHCCGVAQMREHSSLGHADLDALQQNPQPLIFHMEMLKVESPG 160 (165)
T ss_dssp TTCEEEEECCHHHHSSHHHHHHHHTTGGGSSTTTTTCSCCSSCCSCCCCCCCCCSTTTHHHHSCCCCEEEEEEEEEECTT
T ss_pred cCceEEEEECHHHhcCCcchhhhhhhccccCCCccccccceeeeeccccccccccccccccCCCCCeEEEEEEEEEcCCc
Confidence 99999999999999992 10000 0000 0134557899999999999876
Q ss_pred C
Q 028277 210 R 210 (211)
Q Consensus 210 ~ 210 (211)
+
T Consensus 161 e 161 (165)
T 2lkn_A 161 T 161 (165)
T ss_dssp T
T ss_pred c
Confidence 4
No 18
>1r9h_A FKB-6, FK506 binding protein family; structural genomics, peptidylprolyl isomerase, PSI, protein structure initiative; 1.80A {Caenorhabditis elegans} SCOP: d.26.1.1
Probab=99.94 E-value=2.7e-26 Score=175.29 Aligned_cols=111 Identities=29% Similarity=0.515 Sum_probs=103.9
Q ss_pred cCCccEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcE
Q 028277 87 ARSGLGYCDIASGSGV-EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGK 165 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G~-~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~ 165 (211)
+++|++|+++++|+|. .++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |++|++
T Consensus 12 ~~~gl~~~~l~~G~g~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~~~vi~G~e~~l~g------m~~Ge~ 85 (135)
T 1r9h_A 12 KDGGVLKLIKKEGQGVVKPTTGTTVKVHYVGTLENGTKFDSSRDRGDQFSFNLGRGNVIKGWDLGVAT------MTKGEV 85 (135)
T ss_dssp CCSSEEEEEEECCBSSCCCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTTTSSCHHHHHHHTT------CCBTCE
T ss_pred CCCcEEEEEEEccCCCcCCCCCCEEEEEEEEEECCCCEEEecCcCCCCEEEEeCCCCccHHHHHHHhc------CCCCCE
Confidence 7889999999999997 599999999999999999999999987678999999999999999999999 999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecC
Q 028277 166 RKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSG 208 (211)
Q Consensus 166 ~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~ 208 (211)
++|+||++++||..+.+. .||+|++|+|+|+|++++..
T Consensus 86 ~~v~ip~~~aYG~~g~~~-----~Ip~~~~l~f~v~l~~i~~~ 123 (135)
T 1r9h_A 86 AEFTIRSDYGYGDAGSPP-----KIPGGATLIFEVELFEWSAE 123 (135)
T ss_dssp EEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC-
T ss_pred EEEEEChHHcCCCCCCCC-----CcCcCCcEEEEEEEEEeecC
Confidence 999999999999988753 89999999999999999754
No 19
>1q6h_A FKBP-type peptidyl-prolyl CIS-trans isomerase FKP; chaperone, peptidyl-prolyl isomerase, heat shock protein, FK family; HET: MSE; 1.97A {Escherichia coli} SCOP: d.26.1.1 PDB: 1q6i_A* 1q6u_A
Probab=99.94 E-value=2.4e-26 Score=189.23 Aligned_cols=114 Identities=36% Similarity=0.642 Sum_probs=106.3
Q ss_pred CCCCCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCC
Q 028277 79 DPPCEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVP 158 (211)
Q Consensus 79 ~~~~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~ 158 (211)
....++.++++|++|+++++|+|..|+.||.|++||++++.||++|++++.++.|+.|.+ +++|+||+++|.+
T Consensus 111 ~~~~~v~~~~sGl~y~vl~~G~G~~p~~gD~V~V~Y~g~l~dG~vfdss~~~g~p~~f~l--g~vI~G~eeaL~g----- 183 (224)
T 1q6h_A 111 AKEKGVKTSSTGLVYQVVEAGKGEAPKDSDTVVVNYKGTLIDGKEFDNSYTRGEPLSFRL--DGVIPGWTEGLKN----- 183 (224)
T ss_dssp HHSTTEEECTTSCEEEEEECCSSCCCCTTCEEEEEEEEEETTSCEEEEGGGGTSCEEEEG--GGSCHHHHHHGGG-----
T ss_pred CcCCCeEECCCceEEEEEecccCccccCCCEEEEEEEEEeCCCCEEeeccccCCCEEEEc--CCcchhHHHHHcC-----
Confidence 334678889999999999999999999999999999999999999999998888999999 5899999999999
Q ss_pred CcccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeee
Q 028277 159 PMHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIY 206 (211)
Q Consensus 159 ~m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~ 206 (211)
|++|++++|+||++++||..+.+ .||||++|+|+|+|++|+
T Consensus 184 -Mk~Gek~~v~IP~~laYG~~g~~------~IPp~stLiF~VeL~~ik 224 (224)
T 1q6h_A 184 -IKKGGKIKLVIPPELAYGKAGVP------GIPPNSTLVFDVELLDVK 224 (224)
T ss_dssp -SCTTCEEEEEECGGGTTTTTCBT------TBCTTCCEEEEEEEEEEC
T ss_pred -CCCCCEEEEEECchhhcCcCCCC------CCCCCCEEEEEEEEEEeC
Confidence 99999999999999999998864 699999999999999984
No 20
>2jwx_A FKBP38NTD, FK506-binding protein 8 variant; apoptosis, beta barrel, central helix, with flexible N-terminal extension, isomerase; NMR {Homo sapiens}
Probab=99.94 E-value=3.6e-26 Score=178.73 Aligned_cols=111 Identities=21% Similarity=0.351 Sum_probs=102.3
Q ss_pred eeecCCcc-EEEEEecCCCC--CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCc
Q 028277 84 FSFARSGL-GYCDIASGSGV--EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (211)
Q Consensus 84 ~~~~~~G~-~~~~l~~G~G~--~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m 160 (211)
..++++|+ +|+++++|+|. .++.||.|++||++++.||++|+++ +|+.|.+|.+++|+||+++|.+ |
T Consensus 37 ~~~~~sG~v~~~vl~~G~G~~~~p~~gd~V~v~Y~g~l~dG~~fds~----~p~~f~lG~g~vi~G~eeaL~g------M 106 (157)
T 2jwx_A 37 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPL------M 106 (157)
T ss_dssp EESSSSSSEEEEEEECCSTTSCCCCTTEEEEEEEEEECTTSCEEEEE----EEEEEETTTTSSCHHHHHHTTT------S
T ss_pred ceECCCCCEEEEEEEccCCCccCCCCCCEEEEEEEEEECCCCEeecC----CCEEEEeCCCChhHHHHHHHcC------C
Confidence 34889997 89999999998 7999999999999999999999984 7999999999999999999999 9
Q ss_pred ccCcEEEEEECCCCCCCCCC-CCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 161 HVGGKRKLQIPPELAYGPEP-AGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 161 ~~G~~~~v~vp~~~~yg~~g-~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
++|++++|+||++++||..+ ... .||||++|+|+|+|++|++..
T Consensus 107 k~Ge~~~v~IP~~~aYG~~g~~~~-----~IPp~stLiF~VeL~~i~~~~ 151 (157)
T 2jwx_A 107 DVGETAMVTADSKYCYGPQGSRSP-----YIPPHAALCLEVTLKTAVDLE 151 (157)
T ss_dssp CTTCEEEEEECGGGTTTTTCCSSS-----CCCTTCCEEEEEEEEEEEECS
T ss_pred CCCCEEEEEECchhcCCcccccCC-----CcCCCCeEEEEEEEEEEEccc
Confidence 99999999999999999988 442 799999999999999998754
No 21
>2awg_A 38 kDa FK-506 binding protein; FKBP-type, ppiase, BCL-2 inhibitor, SHH signalling antagonist, structural genomics consortium, SGC; 1.60A {Homo sapiens} PDB: 2f2d_A 3ey6_A
Probab=99.93 E-value=2e-25 Score=166.52 Aligned_cols=109 Identities=21% Similarity=0.369 Sum_probs=100.7
Q ss_pred eeecCCc-cEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCc
Q 028277 84 FSFARSG-LGYCDIASGSGV--EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPM 160 (211)
Q Consensus 84 ~~~~~~G-~~~~~l~~G~G~--~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m 160 (211)
...+++| ++|+++++|+|. .++.||.|++||++++.||++|+++ +|+.|.+|.+++++||+++|.+ |
T Consensus 7 ~~~~~~g~~~~~vl~~G~G~~~~~~~gd~V~v~y~g~~~dG~~~ds~----~p~~f~lG~~~~i~g~e~~l~g------m 76 (118)
T 2awg_A 7 LDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPL------M 76 (118)
T ss_dssp EESSSSSSEEEEEEECCCTTCCCCCTTSEEEEEEEEECTTSCEEEEE----EEEEEETTSSCSCHHHHHHGGG------S
T ss_pred eEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEECC----CCEEEEECCCChhHHHHHHHhC------C
Confidence 4567788 999999999998 6999999999999999999999984 7999999999999999999999 9
Q ss_pred ccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 161 HVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 161 ~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
++|++++|.||++++||..+.++ .||||++|+|+|+|+++++
T Consensus 77 ~~Ge~~~~~ip~~~ayG~~~~~~-----~Ip~~~~l~f~v~l~~v~d 118 (118)
T 2awg_A 77 DVGETAMVTADSKYCYGPQGRSP-----YIPPHAALCLEVTLKTAVD 118 (118)
T ss_dssp CTTCEEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred CCCCEEEEEEChHHccCCCCCCC-----ccCCCCeEEEEEEEEEecC
Confidence 99999999999999999988653 7999999999999999874
No 22
>2d9f_A FK506-binding protein 8 variant; FKBP, rapamycin, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=3.5e-25 Score=169.08 Aligned_cols=113 Identities=20% Similarity=0.337 Sum_probs=102.9
Q ss_pred CeeecCCc-cEEEEEecCCCC--CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCC
Q 028277 83 EFSFARSG-LGYCDIASGSGV--EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPP 159 (211)
Q Consensus 83 ~~~~~~~G-~~~~~l~~G~G~--~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~ 159 (211)
....+++| ++|+++++|+|. .++.||.|++||++++.||++|++. +|+.|.+|.+++++||+++|.+
T Consensus 10 ~~~~~~~g~l~~~vl~~G~G~~~~~~~gd~V~v~Y~g~~~dG~~fds~----~p~~f~lG~g~~i~G~e~~L~g------ 79 (135)
T 2d9f_A 10 WLDILGNGLLRKKTLVPGPPGSSRPVKGQVVTVHLQTSLENGTRVQEE----PELVFTLGDCDVIQALDLSVPL------ 79 (135)
T ss_dssp CEESSSSSSSEEEEEECCCSSCCCCCTTSEEEEEEEEEESSSCEEEEE----EEEEEETTSCCSCTTTTTTGGG------
T ss_pred CcEECCCCCEEEEEEEcCCCCCccCCCCCEEEEEEEEEECCCCEEecC----CCEEEEeCCCChhHHHHHHHhC------
Confidence 35567788 999999999998 7999999999999999999999973 7999999999999999999999
Q ss_pred cccCcEEEEEECCCCCCCCCC-CCCCCCCCCCCCCCeEEEEEEEEeeecCCC
Q 028277 160 MHVGGKRKLQIPPELAYGPEP-AGCFSGDCNIPANATLVYDINFVGIYSGNR 210 (211)
Q Consensus 160 m~~G~~~~v~vp~~~~yg~~g-~~~~~~~~~ip~~~~l~~~vel~~i~~~~~ 210 (211)
|++|++++|.||++++||..+ ... .||||++|+|+|+|+++++.+.
T Consensus 80 m~~Ge~~~v~ip~~~aYG~~~~~~~-----~Ip~~~~l~f~vel~~v~~~~~ 126 (135)
T 2d9f_A 80 MDVGETAMVTADSKYCYGPQGSRSP-----YIPPHAALCLEVTLKTAVDRPD 126 (135)
T ss_dssp SCTTCEEEEEECHHHHTCTTCCSSS-----CCCTTCCEEEEEEEEEEESSCS
T ss_pred CCCCCEEEEEEChhHccCcCCcCCC-----ccCCCCeEEEEEEEEEeecCCc
Confidence 999999999999999999987 432 7999999999999999987653
No 23
>2pbc_A FK506-binding protein 2; endoplasmic reticulum, isomerase, polymorphism, rotamase, structural genomics, structural genomics consortium, SGC; 1.80A {Homo sapiens}
Probab=99.91 E-value=3.7e-24 Score=155.50 Aligned_cols=99 Identities=42% Similarity=0.773 Sum_probs=91.1
Q ss_pred CCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 101 GVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 101 G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
|..++.||.|++||++++.||++|++++++++|+.|.+|.+++++||+++|.+ |++|++++|.||++++||..+
T Consensus 3 g~~~~~gd~V~v~y~~~~~dG~~~d~s~~~~~p~~f~lG~~~~i~g~~~~l~g------m~~Ge~~~v~ip~~~ayG~~~ 76 (102)
T 2pbc_A 3 PIKSRKGDVLHMHYTGKLEDGTEFDSSLPQNQPFVFSLGTGQVIKGWDQGLLG------MCEGEKRKLVIPSELGYGERG 76 (102)
T ss_dssp CCCCCTTCEEEEEEEEECTTSCEEEESTTTTCCEEEETTSSSSCHHHHTTSTT------CCTTCEEEEEECGGGTTTTTC
T ss_pred CCcCCCCCEEEEEEEEEECCCCEEEeCCCCCCCEEEEeCCCCccHHHHHHHhC------CCCCCEEEEEECHHHCcCCCC
Confidence 45699999999999999989999999997778999999999999999999999 999999999999999999988
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEEeeecCCC
Q 028277 181 AGCFSGDCNIPANATLVYDINFVGIYSGNR 210 (211)
Q Consensus 181 ~~~~~~~~~ip~~~~l~~~vel~~i~~~~~ 210 (211)
... .||+|++|+|+|+|++|++..+
T Consensus 77 ~~~-----~Ip~~~~l~f~v~l~~v~~~~e 101 (102)
T 2pbc_A 77 APP-----KIPGGATLVFEVELLKIERRTE 101 (102)
T ss_dssp BTT-----TBCTTCCEEEEEEEEEEGGGC-
T ss_pred CCC-----CcCcCCeEEEEEEEEEecccCC
Confidence 653 7999999999999999987643
No 24
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.90 E-value=2.9e-23 Score=176.33 Aligned_cols=110 Identities=35% Similarity=0.540 Sum_probs=104.3
Q ss_pred cCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcE
Q 028277 87 ARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGK 165 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~ 165 (211)
+++|++|+++++|+|.. ++.||.|++||++++.||++|++++++++|+.|.+|.+++|+||+++|.+ |++|++
T Consensus 49 ~~~gl~~~vl~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~f~lG~g~vi~G~e~aL~g------m~~Ge~ 122 (280)
T 1q1c_A 49 QDEGVLKVIKREGTGTEMPMIGDRVFVHYTGWLLDGTKFDSSLDRKDKFSFDLGKGEVIKAWDIAIAT------MKVGEV 122 (280)
T ss_dssp CSSSEEEEEEECCSSSCCCCTTCEEEEEEEEEETTSCEEEESTTSSSCEEEETTTTSSCHHHHHHHTT------CCTTCE
T ss_pred CCCceEEEEEeCCCCCcCCCCCCEEEEEEEEEECCCCEEEecccCCCCEEEEECCcChhHHHHHHHhc------CCCCCE
Confidence 68899999999999998 99999999999999999999999998778999999999999999999999 999999
Q ss_pred EEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 166 RKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 166 ~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
++|+||++++||..+.+. .||+|++|+|+|+|+++..
T Consensus 123 ~~v~ipp~~aYG~~g~~~-----~Ip~~~~lvf~Vel~~i~~ 159 (280)
T 1q1c_A 123 CHITCKPEYAYGSAGSPP-----KIPPNATLVFEVELFEFKG 159 (280)
T ss_dssp EEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEECcHHhCCCcCccC-----CCCCCCcEEEEEEeeeecc
Confidence 999999999999988653 8999999999999999874
No 25
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.88 E-value=9.1e-23 Score=182.98 Aligned_cols=111 Identities=33% Similarity=0.526 Sum_probs=83.5
Q ss_pred ecCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCc
Q 028277 86 FARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGG 164 (211)
Q Consensus 86 ~~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~ 164 (211)
.+++|++|+++++|+|.. ++.||.|+|||++++.||++|++|+.++.|+.|.+|.+.+|+||+++|.+ |++|+
T Consensus 28 ~~~~g~~~~~~~~G~g~~~~~~gd~v~v~y~~~~~~g~~~dss~~~~~p~~~~~g~~~~i~g~~~~l~~------m~~Ge 101 (457)
T 1kt0_A 28 KKDRGVLKIVKRVGNGEETPMIGDKVYVHYKGKLSNGKKFDSSHDRNEPFVFSLGKGQVIKAWDIGVAT------MKRGE 101 (457)
T ss_dssp -----CEEEC--------CCCBTCEEEEEEEEEC-----CBC------CEEEETTSTTSCHHHHHHHTT------CCTTC
T ss_pred CCCCcEEEEEEECCCCCCCCCCCCEEEEEEEEEECCCCEEeccCCCCCCeEEEeCCcchhhHHHHHHhh------CCCCC
Confidence 478899999999999998 99999999999999999999999998888999999999999999999999 99999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 165 KRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 165 ~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
+++|+||++++||..|.++ .||+|++|+|+|+|++|..
T Consensus 102 ~~~~~i~~~~~yg~~g~~~-----~i~~~~~l~~~v~l~~~~~ 139 (457)
T 1kt0_A 102 ICHLLCKPEYAYGSAGSLP-----KIPSNATLFFEIELLDFKG 139 (457)
T ss_dssp EEEEEECGGGTTTTTCBTT-----TBCTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHhccccCCCC-----CCCCCCcEEEEEeeceeec
Confidence 9999999999999988753 8999999999999999874
No 26
>2if4_A ATFKBP42; FKBP-like, alpha-beta, TPR-like, alpha, signaling protein; 2.85A {Arabidopsis thaliana}
Probab=99.87 E-value=4e-22 Score=172.21 Aligned_cols=119 Identities=24% Similarity=0.372 Sum_probs=108.1
Q ss_pred CCeeecCCccEEEEEecCCCCCCCCCCEEEEEEEEEEcC-CcEEecccCCCCceEEeccCC-cccHHHHHHHcCCCCCCC
Q 028277 82 CEFSFARSGLGYCDIASGSGVEAPYGELINVHYTARFAD-GIIFDSSYKRARPLTMRIGVG-KVIKGLDQGILGGDGVPP 159 (211)
Q Consensus 82 ~~~~~~~~G~~~~~l~~G~G~~~~~gd~V~v~y~~~~~~-G~~~~st~~~~~p~~~~lg~~-~~i~g~~~al~g~~~~~~ 159 (211)
..+.++++|+.|+++++|+|..|+.||.|+|||++++.+ |++|++++..+.|+.|.+|.+ ++|+||+++|.+
T Consensus 42 ~~~~~~~~~~~~~~~~~g~g~~~~~gd~v~v~y~g~~~~~g~~fd~~~~~~~~~~~~lg~~~~~i~g~e~~l~~------ 115 (338)
T 2if4_A 42 SEAEVLDEKVSKQIIKEGHGSKPSKYSTCFLHYRAWTKNSQHKFEDTWHEQQPIELVLGKEKKELAGLAIGVAS------ 115 (338)
T ss_dssp SCCEEEETTEEEEEEECCBSCCCCTTCEEEEEEEEEETTTCCCCEEHHHHTCCEEEETTSCCGGGHHHHHHHHH------
T ss_pred cCceeCCCCeEEEEEeCCCCCCCCCCCEEEEEEEEEEcCCCcEeecccCCCCCeEEEcCCCCcccHHHHHHHhc------
Confidence 346788999999999999999999999999999999985 999999988778999999998 899999999999
Q ss_pred cccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 160 MHVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 160 m~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
|++|++++|.||++++||..+... .+.||++++++|+|+|+++...+
T Consensus 116 m~~Ge~~~~~i~~~~~yg~~~~~~---~~~ip~~~~l~f~v~L~~~~~~~ 162 (338)
T 2if4_A 116 MKSGERALVHVGWELAYGKEGNFS---FPNVPPMADLLYEVEVIGFDETK 162 (338)
T ss_dssp CCBTCEEEEEECGGGSSCSSCCCS---SSCCCTTCCEEEEEEEEEEECCC
T ss_pred CCCCCeEEEEECHHHhcCCCCCCC---CCCCCCCCcEEEEEEEEEecCCc
Confidence 999999999999999999988621 12799999999999999998654
No 27
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.87 E-value=3.7e-24 Score=187.43 Aligned_cols=114 Identities=39% Similarity=0.617 Sum_probs=1.6
Q ss_pred eeecCCccEEEEEecCCC-CCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCccc
Q 028277 84 FSFARSGLGYCDIASGSG-VEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHV 162 (211)
Q Consensus 84 ~~~~~~G~~~~~l~~G~G-~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~ 162 (211)
...+++|++|+++++|+| ..|+.||.|++||++++.||++|++++++++|+.|.+|.+++|+||+++|.+ |++
T Consensus 6 ~~~~~~Gl~~~i~~~G~G~~~~~~gd~V~v~Y~g~~~dG~~fdss~~~~~p~~~~lG~g~~i~g~e~~l~g------m~~ 79 (356)
T 3jxv_A 6 NEIGKQGLKKKLLKEGEGWDTPEVGDEVEVHYTGTLLDGKKFDSSRDRDDTFKFKLGQGQVIKGWDQGIKT------MKK 79 (356)
T ss_dssp --------------------------------------------------------------------------------
T ss_pred ceECCCCeEEEEEEeecCCccCCCCCEEEEEEEEEECCCCEEEEcccCCCcEEEEeCCCccchHHHHHHhc------CCC
Confidence 456899999999999999 5699999999999999999999999998888999999999999999999999 999
Q ss_pred CcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecC
Q 028277 163 GGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSG 208 (211)
Q Consensus 163 G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~ 208 (211)
|++++|+||++++||..+..+ .||||++|+|+|+|++++++
T Consensus 80 Ge~~~~~ip~~~aYG~~g~~~-----~Ip~~~~l~f~vel~~~~~~ 120 (356)
T 3jxv_A 80 GENALFTIPPELAYGESGSPP-----TIPANATLQFDVELLSWTSV 120 (356)
T ss_dssp -------------------------------------------CCE
T ss_pred CCEEEEEEChHHhCCCCCCCC-----CcCCCCEEEEEeeEEeeecc
Confidence 999999999999999998764 89999999999999998653
No 28
>3jxv_A 70 kDa peptidyl-prolyl isomerase; FKBP- binding domain five-stranded anti-parallel beta-sheet alpha-helix crossing THis sheet; 2.08A {Triticum aestivum} PDB: 3jym_A
Probab=99.86 E-value=1.8e-21 Score=170.39 Aligned_cols=112 Identities=26% Similarity=0.485 Sum_probs=101.6
Q ss_pred cCCccEEEEEecCCC-CCCCCCCEEEEEEEEEEcCCcEEeccc-CCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCc
Q 028277 87 ARSGLGYCDIASGSG-VEAPYGELINVHYTARFADGIIFDSSY-KRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGG 164 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G-~~~~~gd~V~v~y~~~~~~G~~~~st~-~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~ 164 (211)
.+.+++|+++++|+| ..++.||.|++||++++.||++|+++. .+++|+.|.+|.+++|+||+++|.+ |++|+
T Consensus 242 ~d~~~~~~i~~~g~g~~~~~~gd~V~v~y~g~l~dG~~fd~~~~~~~~p~~f~~G~g~~i~G~e~~l~g------m~~Ge 315 (356)
T 3jxv_A 242 DDKKILKKVLKEXEGYERPNEGAVVTVKITGKLQDGTVFLKKGHDEQEPFEFKTDEEAVIEGLDRAVLN------MKKGE 315 (356)
T ss_dssp TTCCEEEEEEECCBSSCCCCTTCEEEEEEEEEESSSCEEEEESCTTSCCCEEETTTTSSCHHHHHHHTT------CCBTC
T ss_pred cccceeEEeeecccccCCCCCCCEEEEEEEEEECCCCEEeeccccCCcCEEEEECCCccchHHHHHHhC------CCCCC
Confidence 467899999999999 669999999999999999999999884 5678999999999999999999999 99999
Q ss_pred EEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 165 KRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 165 ~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
+++|+||++++||..+... ...||+|++|+|+|+|++|++
T Consensus 316 ~~~v~ip~~~aYG~~~~~~---~~~Ip~~~~l~f~vel~~~~~ 355 (356)
T 3jxv_A 316 VALVTIPPEYAYGSTESKQ---DAIVPPNSTVIYEVELVSFVK 355 (356)
T ss_dssp EEEEEECGGGTTTTSCEES---SSEECTTCCEEEEEEEEEEEC
T ss_pred EEEEEEChHHccCCCCcCC---CCcCCcCCeEEEEEEEEEEEc
Confidence 9999999999999887421 127999999999999999975
No 29
>1q1c_A FK506-binding protein 4; rotamase, TPR repeat, nuclear protein, phosphorylation, isomerase; 1.90A {Homo sapiens} SCOP: d.26.1.1 d.26.1.1 PDB: 1n1a_A 1rot_A 1rou_A
Probab=99.82 E-value=8.2e-20 Score=155.08 Aligned_cols=108 Identities=24% Similarity=0.426 Sum_probs=97.8
Q ss_pred cCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCc---ccHHHHHHHcCCCCCCCccc
Q 028277 87 ARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGK---VIKGLDQGILGGDGVPPMHV 162 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~---~i~g~~~al~g~~~~~~m~~ 162 (211)
.+.|++|+++++|+|.. ++.||.|++||++++ ||++|++ .|+.|.+|.++ +|+||+++|.+ |++
T Consensus 166 ~d~gl~~~il~~G~G~~~~~~gd~V~i~y~g~~-dG~~fd~-----~~~~f~lG~g~~~~~i~G~e~~l~g------mk~ 233 (280)
T 1q1c_A 166 EDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQ-----RELRFEIGEGENLDLPYGLERAIQR------MEK 233 (280)
T ss_dssp CSSSEEEEEEECCSCSCCCCTTCEEEEEEEEEE-TTEEEEE-----EEEEEETTCGGGGTCCHHHHHHHTT------CCT
T ss_pred cccceeEEeeecccccccccCCceEEEEEEEEe-CCEEEec-----CCeEEEecCCcccccchhHHHHHhC------CCC
Confidence 56789999999999984 999999999999998 9999997 38999999887 59999999999 999
Q ss_pred CcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCCC
Q 028277 163 GGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGNR 210 (211)
Q Consensus 163 G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~~ 210 (211)
|++++|.||++++||..+.+. ..||+|++|+|+|+|++|+.+++
T Consensus 234 Ge~~~v~ip~~~~yG~~~~~~----~~IP~~~~l~f~V~L~~i~~~~~ 277 (280)
T 1q1c_A 234 GEHSIVYLKPSYAFGSVGKEK----FQIPPNAELKYELHLKSFEKAKE 277 (280)
T ss_dssp TCEEEEEECGGGTTTTTCBGG----GTBCTTCCEEEEEEEEEEECCCC
T ss_pred CcEEEEEEChhHcCCcCCCcc----CccCCCCeEEEEEEEEEEeCCCC
Confidence 999999999999999987542 15999999999999999998763
No 30
>4dt4_A FKBP-type 16 kDa peptidyl-prolyl CIS-trans isomer; FKBP domain, IF domain, chaperone, peptidyl-prolyl isomerase isomerase; 1.35A {Escherichia coli}
Probab=99.76 E-value=1.8e-18 Score=136.31 Aligned_cols=72 Identities=28% Similarity=0.578 Sum_probs=68.6
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 103 EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 103 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
.++.||.|++||++++.||++|+++++.++|+.|.+|.+++|+||+++|.| |++|++++|.|||+++||..+
T Consensus 24 ~i~~gd~V~v~Y~g~l~dG~vfDss~~~~~P~~f~lG~g~vipG~eeaL~g------m~~Ge~~~v~Ipp~~AYG~~~ 95 (169)
T 4dt4_A 24 SVQSNSAVLVHFTLKLDDGTTAESTRNNGKPALFRLGDASLSEGLEQHLLG------LKVGDKTTFSLEPDAAFGVPS 95 (169)
T ss_dssp SCCTTCEEEEEEEEEETTSCEEEEHHHHTSCEEEETTSSSSCHHHHHHHTT------CCTTCEEEEEECGGGTTCCCC
T ss_pred cCCCCCEEEEEEEEEECCCCEEEecCCCCCCEEEEECCCCccHHHHHHHcC------CCCCCEEEEEEChHHhcCCCC
Confidence 589999999999999999999999997778999999999999999999999 999999999999999999864
No 31
>1hxv_A Trigger factor; FKBP fold, ppiase, chaperone; NMR {Mycoplasma genitalium} SCOP: d.26.1.1
Probab=99.74 E-value=2.3e-18 Score=127.38 Aligned_cols=87 Identities=20% Similarity=0.374 Sum_probs=76.0
Q ss_pred CCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 101 GVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 101 G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
+..++.||.|++||++++ ||++|++++ ++|+.|.+|.+++|+||+++|.| |++|++++|.||+...||..+
T Consensus 27 ~~~~~~gD~V~v~Y~g~~-dG~~fdss~--~~p~~f~lG~g~vi~G~ee~L~G------mk~Ge~~~v~i~fP~~Yg~~~ 97 (113)
T 1hxv_A 27 DKKLANGDIAIIDFTGIV-DNKKLASAS--AQNYELTIGSNSFIKGFETGLIA------MKVNQKKTLALTFPSDYHVKE 97 (113)
T ss_dssp --CCCSSEEEEEEEEEEE-TTEECSTTC--CSEEEEEETSSCSCTTHHHHHHT------SCSSEEEEECCCCCTTSSSSG
T ss_pred CCCCCCCCEEEEEEEEEE-CCEEcccCC--ccCEEEEECCCChhHHHHHHHCC------CCCCCEEEEEEeCchhhCcCC
Confidence 457999999999999999 999999995 57999999999999999999999 999999999997434498764
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEEeee
Q 028277 181 AGCFSGDCNIPANATLVYDINFVGIY 206 (211)
Q Consensus 181 ~~~~~~~~~ip~~~~l~~~vel~~i~ 206 (211)
. ++++|+|+|+|++|+
T Consensus 98 ~----------~g~~l~F~V~l~~Vk 113 (113)
T 1hxv_A 98 L----------QSKPVTFEVVLKAIK 113 (113)
T ss_dssp G----------GSCCCEEEEEECCBC
T ss_pred C----------CCCEEEEEEEEEEEC
Confidence 2 569999999999874
No 32
>3pr9_A FKBP-type peptidyl-prolyl CIS-trans isomerase; FKBP protein, chaperone; 1.95A {Methanocaldococcus jannaschii} SCOP: d.26.1.0 PDB: 3pra_A
Probab=99.72 E-value=1.3e-17 Score=130.00 Aligned_cols=71 Identities=34% Similarity=0.710 Sum_probs=66.1
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCC-------------CCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEE
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKR-------------ARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQI 170 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~-------------~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~v 170 (211)
++.||.|++||++++ ||++|++|++. ++|+.|.+|.+++|+||+++|.| |++|++++|.|
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~a~~~g~~~~~~~~~P~~f~vG~g~vi~G~eeaL~g------m~~Ge~~~v~I 74 (157)
T 3pr9_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILE------MDVGEEREVVL 74 (157)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHHTCCCTTSCCSCEEEETTSSSSCHHHHHHHHH------CCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccccccccccccccccCCCCEEEEECCCcHHHHHHHHHcC------CCCCCEEEEEE
Confidence 688999999999999 99999999853 37999999999999999999999 99999999999
Q ss_pred CCCCCCCCCCC
Q 028277 171 PPELAYGPEPA 181 (211)
Q Consensus 171 p~~~~yg~~g~ 181 (211)
||+++||..+.
T Consensus 75 pp~~aYG~~~~ 85 (157)
T 3pr9_A 75 PPEKAFGKRDP 85 (157)
T ss_dssp CGGGTTCCCCG
T ss_pred CcHHhcCCCCh
Confidence 99999998753
No 33
>2kr7_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLY; protein, rotamase; NMR {Helicobacter pylori}
Probab=99.72 E-value=6.5e-17 Score=125.41 Aligned_cols=73 Identities=27% Similarity=0.487 Sum_probs=67.7
Q ss_pred CCCCCCCEEEEEEEEEEc-CCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 102 VEAPYGELINVHYTARFA-DGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 102 ~~~~~gd~V~v~y~~~~~-~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
..++.||.|++||++++. ||++|++++.. .|+.|.+|.+++++||+++|.| |++|++++|.|||+++||..+
T Consensus 5 ~~i~~gd~V~v~Y~g~~~~dG~~fdss~~~-~p~~f~~G~g~vipg~e~aL~g------m~~Ge~~~v~ipp~~aYG~~~ 77 (151)
T 2kr7_A 5 DLESIKQAALIEYEVREQGSSIVLDSNISK-EPLEFIIGTNQIIAGLEKAVLK------AQIGEWEEVVIAPEEAYGVYE 77 (151)
T ss_dssp CCTTSCCEEEEEEEEEESSCSCEEEESTTT-CCEEEETTCCCSCHHHHHHHTT------CCBTCEEEEEECGGGTTCSSC
T ss_pred cCCCCCCEEEEEEEEEECCCCCEEEeCCCC-cCEEEEECCCCccHHHHHHHcC------CCCCCEEEEEEecHHHcCCCC
Confidence 458899999999999998 99999999853 7999999999999999999999 999999999999999999875
Q ss_pred C
Q 028277 181 A 181 (211)
Q Consensus 181 ~ 181 (211)
.
T Consensus 78 ~ 78 (151)
T 2kr7_A 78 S 78 (151)
T ss_dssp S
T ss_pred c
Confidence 3
No 34
>2k8i_A SLYD, peptidyl-prolyl CIS-trans isomerase; ppiase, chaperone, rotamase; NMR {Escherichia coli}
Probab=99.71 E-value=1e-16 Score=126.73 Aligned_cols=70 Identities=29% Similarity=0.474 Sum_probs=66.3
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
++.||.|++||++++.||++|++++.+ +|+.|.+|.+++|+||+++|.| |++|++++|.|||+++||..+
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~G------m~~Ge~~~v~ippe~aYG~~~ 72 (171)
T 2k8i_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEG------HEVGDKFDVAVGANDAYGQYD 72 (171)
T ss_dssp CCTTEEEEEEEEEEETTSCEEEECCSS-SCEEEETTSCSSCSHHHHHHTT------CCTTCEEEEEEETTTSSCCCC
T ss_pred CCCCCEEEEEEEEEECCCCEEeeccCC-cCEEEEECCCCcchHHHHHHcC------CCCCCEEEEEECcHHhcCCCC
Confidence 688999999999999899999999864 7999999999999999999999 999999999999999999874
No 35
>2kfw_A FKBP-type peptidyl-prolyl CIS-trans isomerase SLYD; protein, cobalt, copper, cytoplasm, metal- binding, nickel, rotamase, zinc; NMR {Escherichia coli}
Probab=99.70 E-value=1.2e-16 Score=128.87 Aligned_cols=71 Identities=28% Similarity=0.468 Sum_probs=66.7
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCCC
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEPA 181 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g~ 181 (211)
++.||.|+|||++++.||++|++++.. +|+.|.+|.+++|+||+++|.+ |++|++++|.|||+++||.++.
T Consensus 3 i~~gd~V~v~Y~g~~~dG~~fdss~~~-~P~~f~lG~g~vipG~eeaL~G------m~vGe~~~v~Ippe~aYGe~~~ 73 (196)
T 2kfw_A 3 VAKDLVVSLAYQVRTEDGVLVDESPVS-APLDYLHGHGSLISGLETALEG------HEVGDKFDVAVGANDAYGQYDE 73 (196)
T ss_dssp CCSSCEEEEEEEEEETTTEEEEECCTT-SCCEEESSSSSSCHHHHHHHSS------SCTTCEEEEECSTTTTSSCCCT
T ss_pred CCCCCEEEEEEEEEECCCCEEEecCCC-CCEEEEECCCCcchHHHHHHcC------CCCCCEEEEEeCcHHhcCCCCh
Confidence 789999999999998899999999864 7999999999999999999999 9999999999999999998753
No 36
>1ix5_A FKBP; ppiase, isomerase; NMR {Methanothermococcusthermolithotrophicus} SCOP: d.26.1.1
Probab=99.70 E-value=2.4e-17 Score=127.88 Aligned_cols=72 Identities=33% Similarity=0.684 Sum_probs=66.7
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccC-------------CCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEE
Q 028277 104 APYGELINVHYTARFADGIIFDSSYK-------------RARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQI 170 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~-------------~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~v 170 (211)
++.||.|++||++++.||++|++|++ ...|+.|.+|.+++++||+++|.| |++|++++|.|
T Consensus 2 i~~gd~V~v~Y~g~~~dG~~fdss~~~~a~~~g~~~~~~~~~P~~f~~G~g~vi~G~eeaL~g------m~~Ge~~~v~i 75 (151)
T 1ix5_A 2 VDKGVKIKVDYIGKLESGDVFDTSIEEVAKEAGIYAPDREYEPLEFVVGEGQLIQGFEEAVLD------MEVGDEKTVKI 75 (151)
T ss_dssp CCTTCEEEECCEECCTTSCCCEESCHHHHHHHTCCCSSCCCCCEEEETTTTCSCHHHHHHHHT------CCTTCCCEEEE
T ss_pred CCCCCEEEEEEEEEECCCCEEEecchhhcccccccccccCCCCEEEEECCCChhHHHHHHHcC------CCCCCEEEEEE
Confidence 68899999999999989999999974 336999999999999999999999 99999999999
Q ss_pred CCCCCCCCCCC
Q 028277 171 PPELAYGPEPA 181 (211)
Q Consensus 171 p~~~~yg~~g~ 181 (211)
||+++||..+.
T Consensus 76 pp~~aYG~~~~ 86 (151)
T 1ix5_A 76 PAEKAYGNRNE 86 (151)
T ss_dssp CTTTSSCSCCS
T ss_pred CcHHHCCCCCc
Confidence 99999998754
No 37
>3prb_A FKBP-type peptidyl-prolyl CIS-trans isomerase; chaperone; 2.20A {Methanocaldococcus jannaschii} PDB: 3prd_A
Probab=99.69 E-value=7.7e-17 Score=132.84 Aligned_cols=98 Identities=30% Similarity=0.585 Sum_probs=82.4
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCC-------------CCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEE
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKR-------------ARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQI 170 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~-------------~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~v 170 (211)
++.||.|++||++++ ||++|++|+.. +.|+.|.+|.+++|+||+++|.| |++|++++|.|
T Consensus 2 i~~Gd~V~v~Y~g~l-dG~vfDss~~~~A~e~gi~~~~~~~~P~~f~lG~g~vIpG~eeaL~G------m~vGek~~v~I 74 (231)
T 3prb_A 2 VEKGKMVKISYDGYV-DGKLFDTTNEELAKKEGIYNPAMIYGPVAIFAGEGQVLPGLDEAILE------MDVGEEREVVL 74 (231)
T ss_dssp CCTTCEEEEEEEEEE-TTEEEEESCHHHHHHTTCCCTTSCCSCEEEETTSSSSCHHHHHHHHT------CCTTCEEEEEE
T ss_pred CCCCCEEEEEEEEEE-CCEEEEeccchhcccccccccccCCCCEEEEeCCCcHHHHHHHHHcC------CCCCCEEEEEe
Confidence 678999999999999 99999999853 37999999999999999999999 99999999999
Q ss_pred CCCCCCCCCCCCC--------CCCC------------------------------CCCC-CCCeEEEEEEEEeeecC
Q 028277 171 PPELAYGPEPAGC--------FSGD------------------------------CNIP-ANATLVYDINFVGIYSG 208 (211)
Q Consensus 171 p~~~~yg~~g~~~--------~~~~------------------------------~~ip-~~~~l~~~vel~~i~~~ 208 (211)
||+++||..+... |+.. .+-| +|.+|.|+|+|+++++.
T Consensus 75 ppe~AYGe~~~~lv~~vp~~~f~~~~~~~~vG~~~~~~~~~g~V~~v~~~~V~vD~NHPLAGk~L~F~vev~~v~ea 151 (231)
T 3prb_A 75 PPEKAFGKRDPSKIKLIPLSEFTKRGIKPIKGLTITIDGIPGKIVSINSGRVLVDFNHELAGKEVKYRIKIEEVVDD 151 (231)
T ss_dssp CGGGTTCCCCGGGEEEEETHHHHTTTCCCCTTCEEEETTEEEEEEEEETTEEEEECSCTTTTCCEEEEEEEEEECCS
T ss_pred CcHHhcCCCChHHEEecCHHHCCcccCCCCCCcEEEecCCCEEEEEEcCCEEEEeCCCccCCCEEEEEEEEEEEecC
Confidence 9999999875211 1110 0111 68999999999999865
No 38
>1p5q_A FKBP52, FK506-binding protein 4; isomerase; 2.80A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 PDB: 1qz2_A
Probab=99.65 E-value=2.1e-15 Score=129.78 Aligned_cols=109 Identities=23% Similarity=0.393 Sum_probs=97.7
Q ss_pred eecCCccEEEEEecCCCC-CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCc---ccHHHHHHHcCCCCCCCc
Q 028277 85 SFARSGLGYCDIASGSGV-EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGK---VIKGLDQGILGGDGVPPM 160 (211)
Q Consensus 85 ~~~~~G~~~~~l~~G~G~-~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~---~i~g~~~al~g~~~~~~m 160 (211)
.+.++|+.++++++|.|. .|..|+.|+|||++++ +|++||++ |+.|.+|.+. ++++|+++|.+ |
T Consensus 21 ~~~~~~~~~~~~~~g~g~~~p~~~~~v~v~y~g~~-~g~~fd~~-----~~~f~lG~g~~~~~~~~~e~al~~------~ 88 (336)
T 1p5q_A 21 MEEDGGIIRRIQTRGEGYAKPNEGAIVEVALEGYY-KDKLFDQR-----ELRFEIGEGENLDLPYGLERAIQR------M 88 (336)
T ss_dssp -CCTTSEEEEEEECCCCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTT------C
T ss_pred ecCCCcEEEEEEeCCCCCCCCCCCCeEEEEEEEEE-CCEEEecC-----CeEEEeCCCCccccchHHHHHHhc------C
Confidence 356789999999999998 5999999999999998 99999986 8999999876 58999999999 9
Q ss_pred ccCcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 161 HVGGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 161 ~~G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
++|+++.|.++|+++||..|... ..||+++++.|++++.++.+..
T Consensus 89 ~~Ge~~~l~i~p~~ayg~~g~~~----~~i~~~~~l~f~~~L~~~~~A~ 133 (336)
T 1p5q_A 89 EKGEHSIVYLKPSYAFGSVGKEK----FQIPPNAELKYELHLKSFEKAK 133 (336)
T ss_dssp CTTCEEEEEECTTTTTTTTCBGG----GTBCSSCCEEEEEEEEEEECCC
T ss_pred CCCCeEEEEECCccccCcCCCCc----cCCCCCCeEEEEEEEeeccccc
Confidence 99999999999999999988652 1599999999999999987653
No 39
>3cgm_A SLYD, peptidyl-prolyl CIS-trans isomerase; chaperone function, two domain P rotamase; 2.41A {Thermus thermophilus} PDB: 3cgn_A 3luo_A*
Probab=99.61 E-value=2.4e-15 Score=117.38 Aligned_cols=65 Identities=26% Similarity=0.523 Sum_probs=62.0
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
++.||.|++||+++ .||++|++++ +.|.+|.+++++||+++|.| |++|++++|.|||+++||..+
T Consensus 3 i~~gd~V~v~Y~g~-~dG~~fdss~-----~~f~~G~g~vipG~e~aL~G------m~~Ge~~~v~ipp~~aYG~~~ 67 (158)
T 3cgm_A 3 VGQDKVVTIRYTLQ-VEGEVLDQGE-----LSYLHGHRNLIPGLEEALEG------REEGEAFQAHVPAEKAYGPHD 67 (158)
T ss_dssp CCTTEEEEEEEEEE-ETTEEEEEEE-----EEEETTSSSSCHHHHHHHTT------CBTTCEEEEEECGGGTTCCCC
T ss_pred CCCCCEEEEEEEEE-ECCEEEEeeE-----EEEEECCCCcChHHHHHHcC------CCCCCEEEEEECcHHHcCCCC
Confidence 67899999999999 8999999996 89999999999999999999 999999999999999999874
No 40
>1w26_A Trigger factor, TF; chaperone, protein folding, ribosome associated protein, nascent chain, cell division, isomerase; 2.7A {Escherichia coli} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 2vrh_A 1w2b_5
Probab=99.43 E-value=3e-13 Score=121.06 Aligned_cols=89 Identities=19% Similarity=0.373 Sum_probs=80.7
Q ss_pred CCCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCC
Q 028277 100 SGVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPE 179 (211)
Q Consensus 100 ~G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~ 179 (211)
.+..++.||.|++||+++. ||+.|++++ +.|+.|.+|.+.+|+||+++|.| |++|+++.|.+|+..+||..
T Consensus 154 ~~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G------~k~Ge~~~v~v~~~~~yg~~ 224 (432)
T 1w26_A 154 KDGAVEAEDRVTIDFTGSV-DGEEFEGGK--ASDFVLAMGQGRMIPGFEDGIKG------HKAGEEFTIDVTFPEEYHAE 224 (432)
T ss_dssp CSSCCCTTCEEEECEEEES-SSCBCSSCC--CSSEEEETTSCCSCTTHHHHSSS------CCSSCEEEEEEECCTTCSCT
T ss_pred cCCCCCCCCEEEEEEEEee-CCeEccCCC--ccceEEEeCCCCcchHHHHHhCC------CCCCCEEEEEECCchhhCCC
Confidence 3556999999999999995 999999987 47999999999999999999999 99999999999999999976
Q ss_pred CCCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 180 PAGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 180 g~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
+. +|.+++|+|+|++|+.
T Consensus 225 ~l----------ag~~~~F~V~v~~v~~ 242 (432)
T 1w26_A 225 NL----------KGKAAKFAINLKKVEE 242 (432)
T ss_dssp TT----------SSCEEEEEEECCEECC
T ss_pred CC----------CCceEEEEEEEEEEec
Confidence 53 5689999999999874
No 41
>1kt0_A FKBP51, 51 kDa FK506-binding protein; FKBP-like ppiase, TPR repeats, isomerase; 2.70A {Homo sapiens} SCOP: a.118.8.1 d.26.1.1 d.26.1.1 PDB: 1kt1_A 3o5d_A
Probab=99.33 E-value=1.3e-11 Score=110.38 Aligned_cols=107 Identities=21% Similarity=0.397 Sum_probs=93.6
Q ss_pred cCCccEEEEEecCCCCC-CCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCC---cccHHHHHHHcCCCCCCCccc
Q 028277 87 ARSGLGYCDIASGSGVE-APYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVG---KVIKGLDQGILGGDGVPPMHV 162 (211)
Q Consensus 87 ~~~G~~~~~l~~G~G~~-~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~---~~i~g~~~al~g~~~~~~m~~ 162 (211)
.+.++.++++++|.|.. |..||.|++||++++ +|++|++. ++.|.+|.+ .++++|++++.. |++
T Consensus 144 ~dg~~~k~i~~~g~~~~~p~~g~~V~v~y~g~~-~g~~f~~~-----~~~f~~g~g~~~~v~~~~e~al~~------~~~ 211 (457)
T 1kt0_A 144 EDGGIIRRTKRKGEGYSNPNEGATVEIHLEGRC-GGRMFDCR-----DVAFTVGEGEDHDIPIGIDKALEK------MQR 211 (457)
T ss_dssp SSSSEEEEEEECCBCSCCCCTTCEEEEEEEEEE-TTEEEEEE-----EEEEETTCGGGGTCCHHHHHHHTT------CCB
T ss_pred CCcceEEEEEecCCCCCCCCCCCEEEEEEEEEe-CCeEEecC-----ceEEEeCCCccccCChHHHHHHHh------CCC
Confidence 34578889999998864 999999999999998 99999973 589999966 489999999999 999
Q ss_pred CcEEEEEECCCCCCCCCCCCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 163 GGKRKLQIPPELAYGPEPAGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 163 G~~~~v~vp~~~~yg~~g~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
|+++.|.++|.++|+..|... ..||++..+.|++++.++.+..
T Consensus 212 ge~~~l~i~P~~ay~~~g~~~----~~ip~~~~l~y~~~l~~~~~A~ 254 (457)
T 1kt0_A 212 EEQCILYLGPRYGFGEAGKPK----FGIEPNAELIYEVTLKSFEKAK 254 (457)
T ss_dssp TCEEEEEECGGGTTCSSCBGG----GTBCTTCCEEEEEEEEEEECCC
T ss_pred CCEEEEEECcccccCCCCCcc----cCCCCCCEEEEEhhhhhcccCc
Confidence 999999999999999988642 1699999999999999987654
No 42
>1t11_A Trigger factor, TF; helix-turn-helix, four-helix-bundle, ppiase, chaperone; 2.50A {Vibrio cholerae} SCOP: a.223.1.1 d.241.2.1 d.26.1.1 PDB: 1l1p_A
Probab=99.27 E-value=2.1e-12 Score=114.16 Aligned_cols=88 Identities=19% Similarity=0.414 Sum_probs=77.9
Q ss_pred CCCCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 101 GVEAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 101 G~~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
+..++.||.|++||+++. ||+.|+++. +.|+.|.+|.+.+|+||+++|.| |++|+++.|.++....|+..+
T Consensus 158 ~~~~~~gD~V~i~y~g~~-dG~~fd~~~--~~~~~~~lG~g~~ipgfee~L~G------mk~Ge~~~v~v~fp~dy~~~~ 228 (392)
T 1t11_A 158 DEAAENGKRVSIDFVGSI-DGVEFEGGK--AENFPLEMGAGRMIPGFEDGIVG------KTKGMEFVIDVTFPEDYHAEN 228 (392)
T ss_dssp SCCCCTTCEEEEEEEEES-SSSCCTTCE--EEEEEEETTSCCBSTTSGGGTTT------CCSSCCCCEEEECCTTCSCTT
T ss_pred CCCCCCCCEEEEEEEEEE-CCEEccCCC--ccceEEEecCCCcchhHHHHhCC------CCCCCEEEEEEeCccccccCC
Confidence 345899999999999994 999999984 47999999999999999999999 999999999998777888653
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEEeeec
Q 028277 181 AGCFSGDCNIPANATLVYDINFVGIYS 207 (211)
Q Consensus 181 ~~~~~~~~~ip~~~~l~~~vel~~i~~ 207 (211)
. +|.+++|+|+|++|+.
T Consensus 229 l----------aGk~~~F~V~v~~i~~ 245 (392)
T 1t11_A 229 L----------KGKAAKFAIKVNKVEA 245 (392)
T ss_dssp T----------SSCEEEECCCEEEEEE
T ss_pred C----------CCCeEEEEEEEEEEEc
Confidence 3 6789999999999975
No 43
>3gty_X Trigger factor, TF; chaperone-client complex, cell cycle, cell division, chapero isomerase, rotamase, ribonucleoprotein, binding; 3.40A {Thermotoga maritima} PDB: 3gu0_A
Probab=97.94 E-value=1.6e-05 Score=70.88 Aligned_cols=75 Identities=12% Similarity=0.168 Sum_probs=62.9
Q ss_pred CCCCCCEEEEEEEEEEcCCcEEecccCCCCceEEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCCCC
Q 028277 103 EAPYGELINVHYTARFADGIIFDSSYKRARPLTMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEPAG 182 (211)
Q Consensus 103 ~~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g~~ 182 (211)
.++.||.|++||.++ .||..|+++. +.++.|.+|.+. + |+++|.| |++|+++.|-+..
T Consensus 154 ~a~~gD~V~id~~~~-~dG~~~~~~~--~~~~~l~~g~~~--~-fe~~liG------~k~Ge~~~~~vtF---------- 211 (433)
T 3gty_X 154 PAEAGDLVRVNMEVY-NEEGKKLTSR--EYEYVISEDEDR--P-FVKDLVG------KKKGDVVEIEREY---------- 211 (433)
T ss_dssp CCCTTSEEEEEEEEE-CTTSCEEEEE--EEEEECCSSCCC--T-THHHHTT------CCTTCEEEEEEEE----------
T ss_pred ccCCCCEEEEEEEEE-ECCEECcCCC--CCCeEEEecCCc--h-HHHHhCC------CCCCceEEEEEee----------
Confidence 478999999999988 4899999864 367888898877 3 9999999 9999999998743
Q ss_pred CCCCCCCCCCCCeEEEEEEEEeeecC
Q 028277 183 CFSGDCNIPANATLVYDINFVGIYSG 208 (211)
Q Consensus 183 ~~~~~~~ip~~~~l~~~vel~~i~~~ 208 (211)
+|.+..|.|+|.+|+..
T Consensus 212 ---------aGk~a~F~VtV~~Ik~~ 228 (433)
T 3gty_X 212 ---------EGKKYTYKLEVEEVYKR 228 (433)
T ss_dssp ---------TTEEEEEEEEEEEEEEE
T ss_pred ---------CCCeEEEEEEEEEEEEe
Confidence 24689999999998753
No 44
>3isy_A Bsupi, intracellular proteinase inhibitor; intracellular proteinase inhibitor bsupi, beta sandwich, GRE structural genomics; HET: PG4; 2.61A {Bacillus subtilis}
Probab=64.55 E-value=22 Score=25.61 Aligned_cols=33 Identities=6% Similarity=0.134 Sum_probs=15.3
Q ss_pred CCCEEEEEEEEEEcCCcEEecccCCCCceEEec
Q 028277 106 YGELINVHYTARFADGIIFDSSYKRARPLTMRI 138 (211)
Q Consensus 106 ~gd~V~v~y~~~~~~G~~~~st~~~~~p~~~~l 138 (211)
.|+.+.+.++..+.....+.=+|..+.-+.|.+
T Consensus 16 ~g~~v~~~ltv~N~s~~~v~l~f~Sgq~~Df~v 48 (120)
T 3isy_A 16 EPEQIKFNMSLKNQSERAIEFQFSTGQKFELVV 48 (120)
T ss_dssp CSSCEEEEEEEEECSSSCEEEEESSSCCEEEEE
T ss_pred CCCeEEEEEEEEcCCCCcEEEEeCCCCEEEEEE
Confidence 344566666666543333333333344444444
No 45
>2lkt_A Retinoic acid receptor responder protein 3; TIG3, human tumor suppressor II family, NLPC/P60, hydrolase; NMR {Homo sapiens}
Probab=38.84 E-value=34 Score=24.21 Aligned_cols=25 Identities=28% Similarity=0.563 Sum_probs=19.6
Q ss_pred CCCCCCCEEEE------EEEEEEcCCcEEec
Q 028277 102 VEAPYGELINV------HYTARFADGIIFDS 126 (211)
Q Consensus 102 ~~~~~gd~V~v------~y~~~~~~G~~~~s 126 (211)
++|++||.+.+ ||-++..||.++.=
T Consensus 6 ~ep~pGDlI~~~r~~Y~H~gIYvGdg~ViH~ 36 (125)
T 2lkt_A 6 QEPKPGDLIEIFRLGYEHWALYIGDGYVIHL 36 (125)
T ss_dssp CCCCTTCEEEEECSSSCEEEEEEETTEEEEE
T ss_pred CCCCCCCEEEEeCCCccEEEEEeCCCeEEEE
Confidence 45889998876 78888888888764
No 46
>2p4v_A Transcription elongation factor GREB; transcript cleavage, GRE-factors, RNA polymerase; 2.60A {Escherichia coli}
Probab=33.21 E-value=84 Score=23.34 Aligned_cols=23 Identities=17% Similarity=0.283 Sum_probs=19.2
Q ss_pred cHHHHHHHcCCCCCCCcccCcEEEEEECC
Q 028277 144 IKGLDQGILGGDGVPPMHVGGKRKLQIPP 172 (211)
Q Consensus 144 i~g~~~al~g~~~~~~m~~G~~~~v~vp~ 172 (211)
.-.+-.||.| .++|+.+.+..|.
T Consensus 121 ~SPlg~ALlG------k~vGD~v~v~~P~ 143 (158)
T 2p4v_A 121 DSPMARALLK------KEVGDLAVVNTPA 143 (158)
T ss_dssp TSHHHHHSTT------CCTTCEEEEECSS
T ss_pred CCHHHHHhcC------CCCCCEEEEEcCC
Confidence 3458899999 9999999988664
No 47
>2f23_A Anti-cleavage anti-GREA transcription factor GFH1; anti-GREA GFH1 thermus thermophilus; 1.60A {Thermus thermophilus} SCOP: a.2.1.1 d.26.1.2 PDB: 2eul_A 3aoh_X* 3aoi_X* 2etn_A
Probab=30.66 E-value=69 Score=23.67 Aligned_cols=22 Identities=27% Similarity=0.511 Sum_probs=19.0
Q ss_pred HHHHHHHcCCCCCCCcccCcEEEEEECC
Q 028277 145 KGLDQGILGGDGVPPMHVGGKRKLQIPP 172 (211)
Q Consensus 145 ~g~~~al~g~~~~~~m~~G~~~~v~vp~ 172 (211)
-.+-.||.| .++|+.+.+..|.
T Consensus 123 SPlG~ALlG------k~~GD~v~~~~p~ 144 (156)
T 2f23_A 123 SPMGKALLG------HRVGDVLSLDTPK 144 (156)
T ss_dssp SHHHHHHTT------CCTTCEEEEEETT
T ss_pred CHHHHHHcC------CCCCCEEEEEcCC
Confidence 358899999 9999999998774
No 48
>1zc1_A Ubiquitin fusion degradation protein 1; UFD1, double-PSI-beta-barrel, protein turnover; NMR {Saccharomyces cerevisiae}
Probab=23.98 E-value=1.7e+02 Score=22.89 Aligned_cols=73 Identities=11% Similarity=0.178 Sum_probs=46.5
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCce--EEeccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCCC
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKRARPL--TMRIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEPA 181 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~--~~~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g~ 181 (211)
++.||.|.|+|+ .+..|+.+.= +|. .|. .-.+.-.-|+..|.. ...+.+|+...|.- .
T Consensus 106 l~~gd~V~i~~~-~LPkgt~vkl-----qP~~~~Fl-di~npKavLE~~LRn---fstLT~Gd~I~i~~------~---- 165 (208)
T 1zc1_A 106 IQPGSLLQISST-DVPLGQFVKL-----EPQSVDFL-DISDPKAVLENVLRN---FSTLTVDDVIEISY------N---- 165 (208)
T ss_dssp CCTTCEEEEEEE-ECCCCSEEEE-----ECCHHHHH-TSSCHHHHHHHHHHH---CSCEESSSEEEEEE------T----
T ss_pred CCCCCEEEEEEe-EcCCCCEEEE-----eECccccc-cccCHHHHHHHHhhc---CccccCCCEEEEEe------C----
Confidence 468999999986 5667764422 221 121 113344457777775 66699999988741 1
Q ss_pred CCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 182 GCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 182 ~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
...|++.|+++++.+
T Consensus 166 -------------~~~y~l~V~e~kP~~ 180 (208)
T 1zc1_A 166 -------------GKTFKIKILEVKPES 180 (208)
T ss_dssp -------------TEEEEEEEEEEECSS
T ss_pred -------------CEEEEEEEEEEcCCC
Confidence 256888888888654
No 49
>1grj_A GREA protein; transcript elongation factor, transcript cleavage factor, transcription regulation; 2.20A {Escherichia coli} SCOP: a.2.1.1 d.26.1.2
Probab=22.13 E-value=90 Score=23.13 Aligned_cols=22 Identities=14% Similarity=0.348 Sum_probs=16.0
Q ss_pred HHHHHHHcCCCCCCCcccCcEEEEEECC
Q 028277 145 KGLDQGILGGDGVPPMHVGGKRKLQIPP 172 (211)
Q Consensus 145 ~g~~~al~g~~~~~~m~~G~~~~v~vp~ 172 (211)
-.+-.||.| .++|+.+.+..|.
T Consensus 124 SPlG~ALlG------k~~GD~v~v~~p~ 145 (158)
T 1grj_A 124 SPIARGLIG------KEEDDVVVIKTPG 145 (158)
T ss_dssp SHHHHHHTT------CBTTCEECC----
T ss_pred CHHHHHHcC------CCCCCEEEEEcCC
Confidence 458899999 9999998887764
No 50
>3htx_A HEN1; HEN1, small RNA methyltransferase, protein-RNA complex; HET: SAH; 3.10A {Arabidopsis thaliana}
Probab=21.97 E-value=1.2e+02 Score=29.25 Aligned_cols=61 Identities=18% Similarity=0.436 Sum_probs=44.0
Q ss_pred CCCCCEEEEEEEEEEc-CCcE----------------Eeccc-----------CCCCceEEeccCCcccHHHHHHHcCCC
Q 028277 104 APYGELINVHYTARFA-DGII----------------FDSSY-----------KRARPLTMRIGVGKVIKGLDQGILGGD 155 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~-~G~~----------------~~st~-----------~~~~p~~~~lg~~~~i~g~~~al~g~~ 155 (211)
+..|..+.|.|+..+. +|+- .++.| +..+.+.|.+|.+.+.+-++-.+.-
T Consensus 561 i~~gs~~~~~y~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ies~~e~~fe~g~g~~~~~le~vV~q-- 638 (950)
T 3htx_A 561 ITNGSVVSICYSLSLAVDPEYSSDGESPREDNESNEEMESEYSANCESSVEPIESNEEIEFEVGTGSMNPHIESEVTQ-- 638 (950)
T ss_dssp CCTTEEEEEEEEEEEEECC----------------------------CCCEEEEEEEEEEEEETTTCBCHHHHHHHTT--
T ss_pred cCCCcEEEEEEEEEEEecCcccccccccccccccccccccccccchhhhhhcccccHHHHHHHhcCCccchhhheeee--
Confidence 6899999999999875 3211 11111 1124678999999999999988888
Q ss_pred CCCCcccCcEEEEEE
Q 028277 156 GVPPMHVGGKRKLQI 170 (211)
Q Consensus 156 ~~~~m~~G~~~~v~v 170 (211)
|.+|+...|..
T Consensus 639 ----ms~gqT~~F~~ 649 (950)
T 3htx_A 639 ----MTVGEYASFKM 649 (950)
T ss_dssp ----CCTTCEEEEEE
T ss_pred ----ccccceeEEec
Confidence 99999988774
No 51
>2yuj_A Ubiquitin fusion degradation 1-like; ubiquitin-dependent proteolytic, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=20.15 E-value=1.6e+02 Score=22.74 Aligned_cols=72 Identities=13% Similarity=0.214 Sum_probs=45.8
Q ss_pred CCCCCEEEEEEEEEEcCCcEEecccCCCCce--EE-eccCCcccHHHHHHHcCCCCCCCcccCcEEEEEECCCCCCCCCC
Q 028277 104 APYGELINVHYTARFADGIIFDSSYKRARPL--TM-RIGVGKVIKGLDQGILGGDGVPPMHVGGKRKLQIPPELAYGPEP 180 (211)
Q Consensus 104 ~~~gd~V~v~y~~~~~~G~~~~st~~~~~p~--~~-~lg~~~~i~g~~~al~g~~~~~~m~~G~~~~v~vp~~~~yg~~g 180 (211)
++.||.|.|+|+ .+..|+.+.= +|. .| .+ .+.-.-|+..|.. ...+.+|+...|. |.
T Consensus 101 l~~gd~V~v~~~-~LPkgt~vkl-----qP~~~~Fl~i--~npKavLE~~Lrn---fstLT~Gd~I~I~------~~--- 160 (190)
T 2yuj_A 101 LEEGGLVQVESV-NLQVATYSKF-----QPQSPDFLDI--TNPKAVLENALRN---FACLTTGDVIAIN------YN--- 160 (190)
T ss_dssp CCTTEEEEEEEE-CCCCCSEEEE-----EESSHHHHHS--SCHHHHHHHHHTT---CCEECTTCEEEEE------SS---
T ss_pred CCCCCEEEEEEe-ecCCCcEEEE-----EECCcccccc--ccHHHHHHHHHhc---CcccccCCEEEEE------eC---
Confidence 458899999987 5556754421 122 11 22 3344457888886 6669999998885 21
Q ss_pred CCCCCCCCCCCCCCeEEEEEEEEeeecCC
Q 028277 181 AGCFSGDCNIPANATLVYDINFVGIYSGN 209 (211)
Q Consensus 181 ~~~~~~~~~ip~~~~l~~~vel~~i~~~~ 209 (211)
...|++.|+++++.+
T Consensus 161 --------------~~~y~l~V~e~kP~~ 175 (190)
T 2yuj_A 161 --------------EKIYELRVMETKPDK 175 (190)
T ss_dssp --------------SCEEEEEEEEESSSS
T ss_pred --------------CEEEEEEEEEEcCCC
Confidence 235888888887653
Done!