Query 028282
Match_columns 211
No_of_seqs 51 out of 53
Neff 3.5
Searched_HMMs 13730
Date Mon Mar 25 14:50:13 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028282.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028282hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d2fhfa2 b.1.18.2 (A:163-287) P 65.1 4.5 0.00033 30.1 4.9 83 78-191 35-120 (125)
2 d1x71a1 b.60.1.1 (A:4-177) Neu 31.4 15 0.0011 25.8 2.9 23 115-137 135-158 (174)
3 d1qwda_ b.60.1.1 (A:) Outer me 31.0 14 0.001 25.9 2.6 24 115-138 132-156 (167)
4 d2cpga_ a.43.1.3 (A:) Transcri 29.8 6.4 0.00047 24.5 0.4 20 119-138 8-27 (43)
5 d1beba_ b.60.1.1 (A:) beta-Lac 28.0 20 0.0014 24.3 2.9 22 116-137 119-141 (156)
6 d1g83a2 d.93.1.1 (A:142-245) T 26.4 76 0.0055 20.8 5.8 55 119-178 12-67 (104)
7 d1gm6a_ b.60.1.1 (A:) Salivary 24.6 25 0.0018 23.8 2.9 22 116-137 117-139 (158)
8 d1r7ma2 d.95.2.1 (A:121-225) D 24.2 41 0.003 23.1 4.1 24 111-134 38-61 (105)
9 d1ae9a_ d.163.1.1 (A:) Integra 23.3 22 0.0016 23.6 2.4 20 117-136 1-20 (179)
10 d1jyra_ d.93.1.1 (A:) Growth f 22.2 1E+02 0.0074 20.3 6.4 52 119-180 9-61 (96)
11 d1d4ta_ d.93.1.1 (A:) The Xlp 22.2 94 0.0068 20.0 5.6 53 119-181 10-63 (104)
12 d1znda1 b.60.1.1 (A:1-157) Maj 22.2 26 0.0019 23.7 2.6 22 116-137 121-143 (157)
13 d1i4ua_ b.60.1.1 (A:) Alpha-cr 22.1 25 0.0018 25.4 2.6 24 115-138 136-160 (181)
14 d1o48a_ d.93.1.1 (A:) c-src ty 21.8 41 0.003 22.4 3.6 35 120-158 12-47 (106)
15 d1ew3a_ b.60.1.1 (A:) Lipocali 20.8 29 0.0021 23.6 2.6 23 116-138 118-141 (159)
16 d1lf7a_ b.60.1.1 (A:) Compleme 20.7 29 0.0021 24.0 2.6 22 116-137 123-145 (171)
17 d1nrva_ d.93.1.1 (A:) Growth f 20.3 89 0.0065 20.6 5.2 37 119-159 11-48 (105)
No 1
>d2fhfa2 b.1.18.2 (A:163-287) Pullulanase PulA {Klebsiella pneumoniae [TaxId: 573]}
Probab=65.07 E-value=4.5 Score=30.06 Aligned_cols=83 Identities=13% Similarity=0.136 Sum_probs=54.4
Q ss_pred eEEEeeecCCC-CceeccceeeecccCCCCcccccceeeccCCCCHHHHHHHHHHhhcCCceEEEecCCccCCCCCceEE
Q 028282 78 QFSLEHAFGDS-DFVPAGTFSARLKTSSHGGQTLTKLRFSRNAFTGEDKEKFEKLLQDDDFYRIRLPSNTVSPPGRDYII 156 (211)
Q Consensus 78 ~f~LEHSf~d~-~Ft~RG~~~arlk~s~~g~~tl~~lrlsq~~LSe~e~~kLk~LA~~DGfYRIRvps~vl~p~~~~yV~ 156 (211)
.+.|.||.+.+ .+...|. ..-..++|+...|++++++||--|+ |+=-.|+|.+
T Consensus 35 ~~~L~~S~~a~i~~~~~~~------------~~g~~i~L~~~~L~~~~~akfPHLa---~~~Af~~~~~----------- 88 (125)
T d2fhfa2 35 IVRLYYSHSSKVAADSNGE------------FSDKYVKLTPTTVNQQVSMRFPHLA---SYPAFKLPDD----------- 88 (125)
T ss_dssp EEEEEEESSSCCCCCTTSB------------CCSEEEECEEECCCHHHHHHCGGGT---TSCEEECCTT-----------
T ss_pred EEEEEECCCCCeeEccCcc------------cCCeEEEEeeCCCCHHHHHhCcccc---CCeeeeCCcc-----------
Confidence 57899998744 4444333 2235577778899999999999997 3333455633
Q ss_pred EeeeccccccCCCcceEEEEee-CcEEEEEEeec-cC
Q 028282 157 SSVKARCLPREGLDEHFVIHME-GVNILAVNYGA-FG 191 (211)
Q Consensus 157 SsVkAC~L~es~LsD~itiHlD-~GnVIgVsy~t-pG 191 (211)
+.++.+++.+| +.+..| +|++++.+.+- +|
T Consensus 89 --~~~~~lLkgQL---vv~a~da~G~~~~ATgVQ~~G 120 (125)
T d2fhfa2 89 --VNVDELLQGET---VAIAAESDGILSSATQVQTAG 120 (125)
T ss_dssp --CCHHHHTTSEE---EEEEECTTSBEEEEEEEECHH
T ss_pred --cCHHHHhhccE---EEEEECCCCCEEeeeecccCC
Confidence 12344555443 367788 79999998763 44
No 2
>d1x71a1 b.60.1.1 (A:4-177) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.39 E-value=15 Score=25.81 Aligned_cols=23 Identities=26% Similarity=0.427 Sum_probs=20.8
Q ss_pred eccCC-CCHHHHHHHHHHhhcCCc
Q 028282 115 FSRNA-FTGEDKEKFEKLLQDDDF 137 (211)
Q Consensus 115 lsq~~-LSe~e~~kLk~LA~~DGf 137 (211)
++|++ ++++.+++|+++|+..|+
T Consensus 135 lsR~~~~~~~~~~~~~~~~~~~G~ 158 (174)
T d1x71a1 135 YGRTKELTSELKENFIRFSKSLGL 158 (174)
T ss_dssp EESSSCCCHHHHHHHHHHHHTTTC
T ss_pred EecCCCCCHHHHHHHHHHHHHcCC
Confidence 37886 999999999999999997
No 3
>d1qwda_ b.60.1.1 (A:) Outer membrane lipoprotein Blc {Escherichia coli [TaxId: 562]}
Probab=30.99 E-value=14 Score=25.91 Aligned_cols=24 Identities=21% Similarity=0.346 Sum_probs=21.3
Q ss_pred eccCC-CCHHHHHHHHHHhhcCCce
Q 028282 115 FSRNA-FTGEDKEKFEKLLQDDDFY 138 (211)
Q Consensus 115 lsq~~-LSe~e~~kLk~LA~~DGfY 138 (211)
++|++ ++++.+++++++|+..|+=
T Consensus 132 lsR~~~l~~~~~~~~~~~~~~~G~d 156 (167)
T d1qwda_ 132 LSRTPTISDEVKQEMLAVATREGFD 156 (167)
T ss_dssp EESSSSCCHHHHHHHHHHHHHTTCC
T ss_pred EEcCCCCCHHHHHHHHHHHHHhCCC
Confidence 48885 9999999999999999973
No 4
>d2cpga_ a.43.1.3 (A:) Transcriptional repressor CopG {Streptococcus agalactiae [TaxId: 1311]}
Probab=29.83 E-value=6.4 Score=24.55 Aligned_cols=20 Identities=15% Similarity=0.247 Sum_probs=17.8
Q ss_pred CCCHHHHHHHHHHhhcCCce
Q 028282 119 AFTGEDKEKFEKLLQDDDFY 138 (211)
Q Consensus 119 ~LSe~e~~kLk~LA~~DGfY 138 (211)
.|||+..+.|+++|++-||-
T Consensus 8 slse~~~~~lek~a~e~g~s 27 (43)
T d2cpga_ 8 TLSESVLENLEKMAREMGLS 27 (43)
T ss_dssp EEEHHHHHHHHHHHHHHTCC
T ss_pred EecHHHHHHHHHHHHHcCcc
Confidence 48899999999999998873
No 5
>d1beba_ b.60.1.1 (A:) beta-Lactoglobulin {Cow (Bos taurus) [TaxId: 9913]}
Probab=27.99 E-value=20 Score=24.32 Aligned_cols=22 Identities=32% Similarity=0.403 Sum_probs=19.6
Q ss_pred ccCC-CCHHHHHHHHHHhhcCCc
Q 028282 116 SRNA-FTGEDKEKFEKLLQDDDF 137 (211)
Q Consensus 116 sq~~-LSe~e~~kLk~LA~~DGf 137 (211)
+|.| |+++.+++|+++++.-|+
T Consensus 119 sR~p~l~~e~~~~f~~~~~~~g~ 141 (156)
T d1beba_ 119 VRTPEVDDEALEKFDKALKALPM 141 (156)
T ss_dssp ESSSSCCHHHHHHHHHHHTTSCC
T ss_pred ecCCCCCHHHHHHHHHHHHHcCC
Confidence 7776 999999999999999874
No 6
>d1g83a2 d.93.1.1 (A:142-245) Tyrosine kinase Fyn {Human (Homo sapiens) [TaxId: 9606]}
Probab=26.39 E-value=76 Score=20.77 Aligned_cols=55 Identities=15% Similarity=0.114 Sum_probs=30.8
Q ss_pred CCCHHHHHHH-HHHhhcCCceEEEecCCccCCCCCceEEEeeeccccccCCCcceEEEEee
Q 028282 119 AFTGEDKEKF-EKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKARCLPREGLDEHFVIHME 178 (211)
Q Consensus 119 ~LSe~e~~kL-k~LA~~DGfYRIRvps~vl~p~~~~yV~SsVkAC~L~es~LsD~itiHlD 178 (211)
.++-+|.+++ .+-...||-|=||.... . .+.|++|..-..... .+-=.|+.|+..
T Consensus 12 ~i~R~eAe~~L~~~g~~~G~FLVR~S~~--~--~g~~~Lsv~~~~~~~-~~~v~h~~i~~~ 67 (104)
T d1g83a2 12 KLGRKDAERQLLSFGNPRGTFLIRESET--T--KGAYSLSIRDWDDMK-GDHVKHYKIRKL 67 (104)
T ss_dssp TCCHHHHHHHHHSTTCCTTCEEEEECSS--S--TTCEEEEEEEECSSS-CEEEEEEEEEEC
T ss_pred CCCHHHHHHHHHhcCCCCCcEEEeccCC--C--CCCeEEEEEEeecCc-CCeEEEEEEEEc
Confidence 3566676653 33334699999998732 2 257999864322221 112245666654
No 7
>d1gm6a_ b.60.1.1 (A:) Salivary lipocalin {Pig (Sus scrofa) [TaxId: 9823]}
Probab=24.62 E-value=25 Score=23.84 Aligned_cols=22 Identities=23% Similarity=0.311 Sum_probs=20.1
Q ss_pred ccCC-CCHHHHHHHHHHhhcCCc
Q 028282 116 SRNA-FTGEDKEKFEKLLQDDDF 137 (211)
Q Consensus 116 sq~~-LSe~e~~kLk~LA~~DGf 137 (211)
+|.+ ++++.+++|+++++.-|+
T Consensus 117 sR~~~~~~~~~~~~~~~~~~~Gi 139 (158)
T d1gm6a_ 117 GRKPDVEPKLKDKFVEICQQYGI 139 (158)
T ss_dssp ESSSCCCHHHHHHHHHHHHTTTC
T ss_pred ecCCCCCHHHHHHHHHHHHHcCC
Confidence 6665 999999999999999998
No 8
>d1r7ma2 d.95.2.1 (A:121-225) DNA endonuclease I-SceI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=24.20 E-value=41 Score=23.11 Aligned_cols=24 Identities=25% Similarity=0.314 Sum_probs=20.5
Q ss_pred cceeeccCCCCHHHHHHHHHHhhc
Q 028282 111 TKLRFSRNAFTGEDKEKFEKLLQD 134 (211)
Q Consensus 111 ~~lrlsq~~LSe~e~~kLk~LA~~ 134 (211)
..++|.=+.+|.+|.+.|.+.+..
T Consensus 38 ~~i~l~T~~Ft~~e~~~L~~~L~~ 61 (105)
T d1r7ma2 38 KSIVLNTQSFTFEEVEYLVKGLRN 61 (105)
T ss_dssp CCEEECCTTSCHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCHHHHHHHHHHHHH
Confidence 467888889999999999997765
No 9
>d1ae9a_ d.163.1.1 (A:) Integrase (Int) {Bacteriophage lambda [TaxId: 10710]}
Probab=23.29 E-value=22 Score=23.61 Aligned_cols=20 Identities=15% Similarity=0.220 Sum_probs=17.2
Q ss_pred cCCCCHHHHHHHHHHhhcCC
Q 028282 117 RNAFTGEDKEKFEKLLQDDD 136 (211)
Q Consensus 117 q~~LSe~e~~kLk~LA~~DG 136 (211)
|.+||.||.++|.+.+..+.
T Consensus 1 R~~lt~ee~~~l~~~~~~~~ 20 (179)
T d1ae9a_ 1 RSRLTADEYLKIYQAAESSP 20 (179)
T ss_dssp CCCCCHHHHHHHHHHGGGSC
T ss_pred CCCCCHHHHHHHHHHHhhCC
Confidence 45799999999999988765
No 10
>d1jyra_ d.93.1.1 (A:) Growth factor receptor-bound protein 2 (GRB2) {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.20 E-value=1e+02 Score=20.25 Aligned_cols=52 Identities=17% Similarity=0.234 Sum_probs=31.9
Q ss_pred CCCHHHHHHHHHHhhcCCceEEEecCCccCCCCCceEEEeeeccccccCCCcceEEEEee-Cc
Q 028282 119 AFTGEDKEKFEKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKARCLPREGLDEHFVIHME-GV 180 (211)
Q Consensus 119 ~LSe~e~~kLk~LA~~DGfYRIRvps~vl~p~~~~yV~SsVkAC~L~es~LsD~itiHlD-~G 180 (211)
.+|-+|.+++=.-...||-|=||.... .+ +.|++|..-... --|+-|..+ +|
T Consensus 9 ~isR~~Ae~lL~~~~~~G~FLvR~S~~--~~--g~~~LSv~~~~~------v~H~~I~~~~~g 61 (96)
T d1jyra_ 9 KIPRAKAEEMLSKQRHDGAFLIRESES--AP--GDFSLSVKFGND------VQHFKVLRDGAG 61 (96)
T ss_dssp SCCHHHHHHHHHTCCSTTBEEEEECSS--ST--TCEEEEEEETTE------EEEEECEECTTS
T ss_pred CCCHHHHHHHHhhCCCCCeEEEEecCC--CC--CCEEEEEEeCCc------eEEEEEEECCCC
Confidence 356677765322133689999998732 33 579988653322 246777777 44
No 11
>d1d4ta_ d.93.1.1 (A:) The Xlp protein Sap {Human (Homo sapiens) [TaxId: 9606]}
Probab=22.18 E-value=94 Score=20.03 Aligned_cols=53 Identities=15% Similarity=0.102 Sum_probs=31.4
Q ss_pred CCCHHHHHHHHHHhhcCCceEEEecCCccCCCCCceEEEeeeccccccCCCcceEEEEee-CcE
Q 028282 119 AFTGEDKEKFEKLLQDDDFYRIRLPSNTVSPPGRDYIISSVKARCLPREGLDEHFVIHME-GVN 181 (211)
Q Consensus 119 ~LSe~e~~kLk~LA~~DGfYRIRvps~vl~p~~~~yV~SsVkAC~L~es~LsD~itiHlD-~Gn 181 (211)
.+|-+|.+++=.-...||-|=||-..+ .+ +.|++|....-. --|+-|..+ +|.
T Consensus 10 ~isR~eAe~lL~~~~~~G~FLVR~S~~--~~--g~~~Lsv~~~~~------v~H~~I~~~~~~~ 63 (104)
T d1d4ta_ 10 KISRETGEKLLLATGLDGSYLLRDSES--VP--GVYCLCVLYHGY------IYTYRVSQTETGS 63 (104)
T ss_dssp SCCHHHHHHHHHHHCCTTEEEEEECSS--ST--TCEEEEEEETTE------EEEEEEEECTTSC
T ss_pred CCCHHHHHHHHhhCCCCCeEEEEecCC--CC--CCEEEEEecCCC------ceEEEEEEcCCCc
Confidence 366777776432234689999997632 22 579888654332 235666554 444
No 12
>d1znda1 b.60.1.1 (A:1-157) Major urinary protein/alpha-2u-globulin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=22.17 E-value=26 Score=23.74 Aligned_cols=22 Identities=23% Similarity=0.539 Sum_probs=19.9
Q ss_pred ccCC-CCHHHHHHHHHHhhcCCc
Q 028282 116 SRNA-FTGEDKEKFEKLLQDDDF 137 (211)
Q Consensus 116 sq~~-LSe~e~~kLk~LA~~DGf 137 (211)
+|.+ ++++.+++|+++|+.-|+
T Consensus 121 sR~~~~~~~~~~~f~~~~~~~G~ 143 (157)
T d1znda1 121 GREPDLSSDIKERFAQLCEEHGI 143 (157)
T ss_dssp ESSSCCCHHHHHHHHHHHHHTTC
T ss_pred ecCCCCCHHHHHHHHHHHHHcCC
Confidence 6765 999999999999999887
No 13
>d1i4ua_ b.60.1.1 (A:) Alpha-crustacyanin {European lobster (Homarus gammarus) [TaxId: 6707]}
Probab=22.09 E-value=25 Score=25.35 Aligned_cols=24 Identities=25% Similarity=0.336 Sum_probs=21.2
Q ss_pred eccCC-CCHHHHHHHHHHhhcCCce
Q 028282 115 FSRNA-FTGEDKEKFEKLLQDDDFY 138 (211)
Q Consensus 115 lsq~~-LSe~e~~kLk~LA~~DGfY 138 (211)
|+|++ |+++.+++++++|+..|+-
T Consensus 136 lsR~p~l~~~~~~~~~~~~~~~G~d 160 (181)
T d1i4ua_ 136 FSRSANLADQYVKKCEAAFKNINVD 160 (181)
T ss_dssp EESSSSCCHHHHHHHHHHHHHTTCC
T ss_pred EecCCCCCHHHHHHHHHHHHHcCCC
Confidence 47885 9999999999999999974
No 14
>d1o48a_ d.93.1.1 (A:) c-src tyrosine kinase {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.83 E-value=41 Score=22.42 Aligned_cols=35 Identities=14% Similarity=0.234 Sum_probs=22.8
Q ss_pred CCHHHHHH-HHHHhhcCCceEEEecCCccCCCCCceEEEe
Q 028282 120 FTGEDKEK-FEKLLQDDDFYRIRLPSNTVSPPGRDYIISS 158 (211)
Q Consensus 120 LSe~e~~k-Lk~LA~~DGfYRIRvps~vl~p~~~~yV~Ss 158 (211)
++-+|.++ |++-...||-|=||.... . .+.|++|.
T Consensus 12 i~R~eAe~lL~~~~~~~G~FLVR~S~~--~--~g~y~LSv 47 (106)
T d1o48a_ 12 ITRRESERLLLNAENPRGTFLVRESET--T--KGAYCLSV 47 (106)
T ss_dssp CCHHHHHHHHCCTTCCTTCEEEEECSS--S--TTCEEEEE
T ss_pred CCHHHHHHHHHhcCCCCCcEEEEcccC--C--CCCEEEEE
Confidence 55666665 333334699999997622 2 25799986
No 15
>d1ew3a_ b.60.1.1 (A:) Lipocalin allergen {Horse (Equus caballus), equ c 1 [TaxId: 9796]}
Probab=20.85 E-value=29 Score=23.56 Aligned_cols=23 Identities=30% Similarity=0.445 Sum_probs=20.5
Q ss_pred ccCC-CCHHHHHHHHHHhhcCCce
Q 028282 116 SRNA-FTGEDKEKFEKLLQDDDFY 138 (211)
Q Consensus 116 sq~~-LSe~e~~kLk~LA~~DGfY 138 (211)
+|.+ ++++.+++|+++++.-|+=
T Consensus 118 sR~~~~~~~~~~~~~~~~~~~G~~ 141 (159)
T d1ew3a_ 118 AREPDVSPEIKEEFVKIVQKRGIV 141 (159)
T ss_dssp ESSSSCCHHHHHHHHHHHHHTTCC
T ss_pred eCCCCCCHHHHHHHHHHHHHcCCC
Confidence 6775 9999999999999999974
No 16
>d1lf7a_ b.60.1.1 (A:) Complement protein C8gamma {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.74 E-value=29 Score=24.04 Aligned_cols=22 Identities=18% Similarity=0.315 Sum_probs=20.1
Q ss_pred ccCC-CCHHHHHHHHHHhhcCCc
Q 028282 116 SRNA-FTGEDKEKFEKLLQDDDF 137 (211)
Q Consensus 116 sq~~-LSe~e~~kLk~LA~~DGf 137 (211)
+|.+ ++.+.+++|++.|+.-|+
T Consensus 123 sR~p~~~~~~~~~f~~~~~~~G~ 145 (171)
T d1lf7a_ 123 ARSLPVSDSVLSGFEQRVQEAHL 145 (171)
T ss_dssp ESSSSCCHHHHHHHHHHHHHTTC
T ss_pred ECCCCCCHHHHHHHHHHHHHcCC
Confidence 7776 899999999999999997
No 17
>d1nrva_ d.93.1.1 (A:) Growth factor receptor-bound protein 10, GRB10 {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.27 E-value=89 Score=20.55 Aligned_cols=37 Identities=11% Similarity=0.323 Sum_probs=24.0
Q ss_pred CCCHHHHHHHH-HHhhcCCceEEEecCCccCCCCCceEEEee
Q 028282 119 AFTGEDKEKFE-KLLQDDDFYRIRLPSNTVSPPGRDYIISSV 159 (211)
Q Consensus 119 ~LSe~e~~kLk-~LA~~DGfYRIRvps~vl~p~~~~yV~SsV 159 (211)
.+|-+|.+++= +-...||-|=||...+ .+ +.||+|..
T Consensus 11 ~isR~~Ae~lL~~~g~~dG~FLVR~S~~--~~--g~y~LSv~ 48 (105)
T d1nrva_ 11 RISREESHRIIKQQGLVDGLFLLRDSQS--NP--KAFVLTLC 48 (105)
T ss_dssp TCCHHHHHHHHHHTTCCTTEEEEEECSS--CT--TCEEEEEE
T ss_pred CCCHHHHHHHHhhcCCCCceEEEEeCCC--CC--CCEEEEEE
Confidence 46666766443 3335789999997632 33 56999954
Done!