BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= 028289
         (211 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q6NZ09|ADRM1_DANRE Proteasomal ubiquitin receptor ADRM1 OS=Danio rerio GN=adrm1b PE=1
           SV=1
          Length = 410

 Score =  132 bits (333), Expect = 1e-30,   Method: Compositional matrix adjust.
 Identities = 57/111 (51%), Positives = 74/111 (66%), Gaps = 1/111 (0%)

Query: 14  EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
           + L+EFRAGKMT  G  V PD RKG V I + +  LIHF W DRT   VEDD I+FP + 
Sbjct: 20  KYLVEFRAGKMTLKGSTVTPDKRKGTVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDC 79

Query: 74  VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            F++VNQ  +GRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 80  EFKRVNQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDDEYCRKVNEYLNNP 130


>sp|Q6P877|ADRM1_XENTR Proteasomal ubiquitin receptor ADRM1 OS=Xenopus tropicalis GN=adrm1
           PE=2 SV=1
          Length = 404

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 14  EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
           + L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP + 
Sbjct: 20  KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDC 79

Query: 74  VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            F++V+Q  +GRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 80  EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKVNEYLNNP 130


>sp|Q6GN67|ADM1A_XENLA Proteasomal ubiquitin receptor ADRM1-A OS=Xenopus laevis GN=adrm1-a
           PE=2 SV=2
          Length = 404

 Score =  130 bits (327), Expect = 7e-30,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 14  EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
           + L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP + 
Sbjct: 20  KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVEDDLIIFPDDC 79

Query: 74  VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            F++V+Q  +GRVY+LKF    ++ F WMQEPK ++D + C  +N ++N P
Sbjct: 80  EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEYCRKLNEYLNNP 130


>sp|Q16186|ADRM1_HUMAN Proteasomal ubiquitin receptor ADRM1 OS=Homo sapiens GN=ADRM1 PE=1
           SV=2
          Length = 407

 Score =  130 bits (326), Expect = 8e-30,   Method: Compositional matrix adjust.
 Identities = 58/114 (50%), Positives = 75/114 (65%), Gaps = 1/114 (0%)

Query: 11  AMQEILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFP 70
           A  + L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP
Sbjct: 18  ASNKYLVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFP 77

Query: 71  HEAVFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            +  F++V Q  SGRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 78  DDCEFKRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNP 131


>sp|Q9JMB5|ADRM1_RAT Proteasomal ubiquitin receptor ADRM1 OS=Rattus norvegicus GN=Adrm1
           PE=2 SV=2
          Length = 407

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 1/109 (0%)

Query: 16  LLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVF 75
           L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP +  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDCEF 82

Query: 76  EKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           ++V Q  SGRVY+LKF    ++ F WMQEPK ++D + C  VN  +N P
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNP 131


>sp|Q7ZXD6|ADM1B_XENLA Proteasomal ubiquitin receptor ADRM1-B OS=Xenopus laevis GN=adrm1-b
           PE=2 SV=1
          Length = 404

 Score =  129 bits (325), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 55/111 (49%), Positives = 75/111 (67%), Gaps = 1/111 (0%)

Query: 14  EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
           + L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   V+DD I+FP + 
Sbjct: 20  KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGSVDDDLIIFPDDC 79

Query: 74  VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            F++V+Q  +GRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 80  EFKRVSQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNP 130


>sp|A1L5A6|ADRM1_BOVIN Proteasomal ubiquitin receptor ADRM1 OS=Bos taurus GN=ADRM1 PE=2
           SV=1
          Length = 407

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 73/109 (66%), Gaps = 1/109 (0%)

Query: 16  LLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVF 75
           L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP +  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDCEF 82

Query: 76  EKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           ++V Q  SGRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNEYLNNP 131


>sp|Q9JKV1|ADRM1_MOUSE Proteasomal ubiquitin receptor ADRM1 OS=Mus musculus GN=Adrm1 PE=1
           SV=2
          Length = 407

 Score =  129 bits (324), Expect = 1e-29,   Method: Compositional matrix adjust.
 Identities = 57/109 (52%), Positives = 72/109 (66%), Gaps = 1/109 (0%)

Query: 16  LLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVF 75
           L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP +  F
Sbjct: 23  LVEFRAGKMSLKGTTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGTVEDDLIIFPDDCEF 82

Query: 76  EKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           ++V Q  SGRVY+LKF    ++ F WMQEPK ++D + C  VN  +N P
Sbjct: 83  KRVPQCPSGRVYVLKFKAGSKRLFFWMQEPKTDQDEEHCRKVNECLNNP 131


>sp|Q98SH3|ADRM1_CHICK Proteasomal ubiquitin receptor ADRM1 OS=Gallus gallus GN=ADRM1 PE=2
           SV=1
          Length = 406

 Score =  128 bits (321), Expect = 4e-29,   Method: Compositional matrix adjust.
 Identities = 56/111 (50%), Positives = 74/111 (66%), Gaps = 1/111 (0%)

Query: 14  EILLEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEA 73
           + L+EFRAGKM+  G  V PD RKGLV I + +  LIHF W DRT   VEDD I+FP + 
Sbjct: 21  KYLVEFRAGKMSLKGSTVTPDKRKGLVYIQQTDDSLIHFCWKDRTSGNVEDDLIIFPDDC 80

Query: 74  VFEKVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
            F++V Q  +GRVY+LKF    ++ F WMQEPK ++D + C  VN ++N P
Sbjct: 81  EFKRVPQCTTGRVYVLKFKAGSKRLFFWMQEPKTDKDEEHCRKVNEYLNNP 131


>sp|Q7K2G1|ADRM1_DROME Proteasomal ubiquitin receptor ADRM1 homolog OS=Drosophila
           melanogaster GN=CG13349 PE=1 SV=1
          Length = 389

 Score =  122 bits (307), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 54/108 (50%), Positives = 74/108 (68%), Gaps = 1/108 (0%)

Query: 17  LEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFE 76
           +EFRAG+M   GK V PD RKGLV + + + GL+HF W DRT   VEDD IVFP +  ++
Sbjct: 18  VEFRAGRMNMVGKMVHPDPRKGLVYMTQSDDGLMHFCWKDRTSGKVEDDLIVFPDDFEYK 77

Query: 77  KVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           +V+Q  +GRVY+LKF +  R+ F WMQEPK ++D + C  +N  +N P
Sbjct: 78  RVDQCKTGRVYVLKFKSSTRRMFFWMQEPKTDKDDEQCRRINELLNNP 125


>sp|Q9Y7Y6|YOY4_SCHPO Uncharacterized protein C342.04 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=SPBC342.04 PE=3 SV=1
          Length = 291

 Score = 80.5 bits (197), Expect = 7e-15,   Method: Compositional matrix adjust.
 Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 4/109 (3%)

Query: 16  LLEFRAGKMT-FDGKKVV-PDSRKGLVRIARGEHGLIHFQWLDRTR-NVVEDDQIVFPHE 72
           L+ F+AGK+    G K++  D  KG + + R  +GLIHFQW  R      EDD IVF  E
Sbjct: 3   LITFKAGKLRRVPGTKLLRADPEKGYIVMNRDAYGLIHFQWAKRNDLENPEDDIIVFSSE 62

Query: 73  AVFEKVNQAS-GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFI 120
             FEKV + + GR Y+LK+ +     F WMQE   + D+     +N +I
Sbjct: 63  CTFEKVTECTTGRAYMLKYPSSAHSLFYWMQEASDDNDTSYAERINSYI 111


>sp|Q09289|ADRM1_CAEEL Proteasomal ubiquitin receptor ADRM1 homolog OS=Caenorhabditis
           elegans GN=C56G2.7 PE=3 SV=2
          Length = 374

 Score = 78.6 bits (192), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 64/115 (55%), Gaps = 8/115 (6%)

Query: 16  LLEFRAGKMTFDG------KKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVF 69
           ++EF+AG+   +       +KVV + +KGLV I +    LIHF W DR    V DD I+F
Sbjct: 18  IVEFKAGRSRLEAGSGDTMRKVVAEPKKGLVFIKQSNDMLIHFCWKDRETGAVVDDLIIF 77

Query: 70  PHEAVFEKV-NQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           P +A F+ V     G+VY+LKF + D K F W+Q+   + D  L   V   +N+P
Sbjct: 78  PDDAEFKAVPGCPDGKVYMLKFKSGDMKLF-WIQDSTPDVDKDLVKKVTDALNKP 131


>sp|Q9USM1|ADRM1_SCHPO Probable proteasomal ubiquitin receptor ADRM1 homolog
           OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
           GN=SPCC16A11.16c PE=3 SV=1
          Length = 388

 Score = 77.8 bits (190), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 43/114 (37%), Positives = 65/114 (57%), Gaps = 5/114 (4%)

Query: 16  LLEFRAGKMTFD-GKKVV-PDSRKGLVRIARGEHGLIHFQWLDRTR--NVVEDDQIVFPH 71
           L+  +AGK+    G  ++  D RKG++ +      L+HF W +R R    VEDD I+FP 
Sbjct: 20  LVSVKAGKLQRKPGTNILQADHRKGVIYMQMASDELLHFYWKERARVSREVEDDYIIFPE 79

Query: 72  EAVFEKVNQAS-GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124
           EA F K+++ + GRVY LKF +  +  F WMQE   E+D +  + +N  I  P+
Sbjct: 80  EAEFIKIDECTTGRVYALKFKSSSQIHFYWMQEYSDEKDKETASLINQLIADPV 133


>sp|Q556N5|ADRM1_DICDI Proteasomal ubiquitin receptor ADRM1 homolog OS=Dictyostelium
           discoideum GN=adrm1-1 PE=1 SV=1
          Length = 287

 Score = 71.6 bits (174), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/97 (38%), Positives = 52/97 (53%), Gaps = 1/97 (1%)

Query: 17  LEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFE 76
           +EF+AGK    G  V  DSRKG ++      GL   QW  R  +  ED+    P E+ F 
Sbjct: 8   VEFKAGKAKLTGTTVTSDSRKGYLKFGVTPEGLTCVQWRPRDSSAYEDEFYFAPGESKFI 67

Query: 77  KVNQA-SGRVYILKFNTDDRKFFLWMQEPKAEEDSQL 112
           KV    +GR+Y L F+  D+K F W+QE   E D+++
Sbjct: 68  KVPACKTGRMYYLNFSGSDQKEFYWLQEANVEGDAKI 104


>sp|O13563|RPN13_YEAST 26S proteasome regulatory subunit RPN13 OS=Saccharomyces cerevisiae
           (strain ATCC 204508 / S288c) GN=RPN13 PE=1 SV=1
          Length = 156

 Score = 40.4 bits (93), Expect = 0.008,   Method: Compositional matrix adjust.
 Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 11/103 (10%)

Query: 11  AMQEILLEFRAGKMTF--DGKKVVPDSRKGLVRIARGEH---GLIHFQWLDRTRNVVED- 64
           +M   +++FRAG   +  D +   P   +G + I   E    G   F+W    + V  + 
Sbjct: 2   SMSSTVIKFRAGVCEYNEDSRLCTPIPVQGEIEIKPNEEEELGFWDFEWRPTEKPVGREL 61

Query: 65  ---DQIVFPHEAVFEKVNQA-SGRVYILKFNTDDRKFFLWMQE 103
                I+ P E ++  +  + SGR++ L F++++R +F W+QE
Sbjct: 62  DPISLILIPGETMWVPIKSSKSGRIFALVFSSNER-YFFWLQE 103


>sp|P81171|Y174_RICPR Uncharacterized peptidase RP174 OS=Rickettsia prowazekii (strain
           Madrid E) GN=RP174 PE=3 SV=2
          Length = 722

 Score = 32.3 bits (72), Expect = 2.4,   Method: Composition-based stats.
 Identities = 23/69 (33%), Positives = 31/69 (44%), Gaps = 10/69 (14%)

Query: 65  DQIVFP-HEAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123
           DQ V P H  +FE         Y+L  N + + +FL  ++      S L  S NYFIN  
Sbjct: 658 DQRVHPWHGRIFE---------YVLAQNPNTKTYFLESRDSGHSSGSDLKESANYFINLY 708

Query: 124 LVFVNEEEL 132
             F N  +L
Sbjct: 709 TFFANTLKL 717


>sp|P06597|MOMP_CHLT2 Major outer membrane porin OS=Chlamydia trachomatis serovar L2
           (strain 434/Bu / ATCC VR-902B) GN=ompA PE=1 SV=1
          Length = 394

 Score = 31.6 bits (70), Expect = 4.5,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 103 EPKAEEDSQLCNSVNYFINRPLVFVNEE 130
           +PK EE + LCN+  + IN+P  +V +E
Sbjct: 220 KPKVEELNVLCNAAEFTINKPKGYVGQE 247


>sp|P75024|MOMPM_CHLMU Major outer membrane porin OS=Chlamydia muridarum (strain MoPn /
           Nigg) GN=ompA PE=2 SV=1
          Length = 387

 Score = 31.6 bits (70), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 102 QEPKAEEDSQLCNSVNYFINRPLVFVNEE 130
            +PK EE + LCN+  + IN+P  +V +E
Sbjct: 215 SKPKVEELNVLCNAAEFTINKPKGYVGQE 243


>sp|P17451|MOMPE_CHLTH Major outer membrane porin, serovar E OS=Chlamydia trachomatis
           GN=ompA PE=2 SV=1
          Length = 393

 Score = 31.6 bits (70), Expect = 4.6,   Method: Compositional matrix adjust.
 Identities = 12/28 (42%), Positives = 19/28 (67%)

Query: 103 EPKAEEDSQLCNSVNYFINRPLVFVNEE 130
           +PK EE + LCN+  + IN+P  +V +E
Sbjct: 219 KPKVEELNVLCNAAEFTINKPKGYVGQE 246


>sp|O60152|UBR1_SCHPO E3 ubiquitin-protein ligase ubr1 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=ubr1 PE=3 SV=1
          Length = 1958

 Score = 30.8 bits (68), Expect = 6.6,   Method: Compositional matrix adjust.
 Identities = 18/60 (30%), Positives = 31/60 (51%), Gaps = 3/60 (5%)

Query: 120 INRPLVFVNEEELDASVPLQVSEDMVEDDVSSRAGNLVVPNLGGEAISDVTSSSGPVKLE 179
           I+ P +F+NE+ +++S P   S  M+E D SS       P     ++ DV S +  V+ +
Sbjct: 386 IDSPDIFLNEDHINSSGPSDTSSHMLETDESSIHSRHWYP---SNSLPDVLSYASRVRFD 442


>sp|Q82IS8|Y3055_STRAW UPF0182 protein SAV_3055 OS=Streptomyces avermitilis (strain ATCC
           31267 / DSM 46492 / JCM 5070 / NCIMB 12804 / NRRL 8165 /
           MA-4680) GN=SAV_3055 PE=3 SV=1
          Length = 998

 Score = 30.8 bits (68), Expect = 6.9,   Method: Composition-based stats.
 Identities = 30/112 (26%), Positives = 51/112 (45%), Gaps = 15/112 (13%)

Query: 61  VVEDDQIVFPHEAVFEKVNQASGRVYILKFNTDDRKFFLWMQ------EPKAEEDSQLCN 114
           V + +Q+ +   +V   V+  +G+V + +++T D     W +      +PK +    L +
Sbjct: 624 VAQQNQVNYIRNSVKATVDAYTGKVTLFEWDTKDPVLKTWEKAFPGTVKPKGDIPKSLID 683

Query: 115 SVNYFINRPLVFVNEEEL------DASVPLQVSED-MVEDDVSSRAGNLVVP 159
            + Y   + L  V  E L      DA   L  SE   V DD S+++GN V P
Sbjct: 684 HLRY--PQDLFKVQRELLTRYHVKDAQTFLSGSEVWQVPDDPSNKSGNAVPP 733


>sp|Q88MZ4|Y1424_PSEPK Uncharacterized protein PP_1424 OS=Pseudomonas putida (strain
           KT2440) GN=PP_1424 PE=3 SV=1
          Length = 84

 Score = 30.8 bits (68), Expect = 7.6,   Method: Compositional matrix adjust.
 Identities = 18/70 (25%), Positives = 34/70 (48%), Gaps = 2/70 (2%)

Query: 54  WLDRTRNVVEDDQIVFP-HEAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQL 112
           W  R R ++E D ++ P  + V+  +N+    +Y+   + +D+  F W  E    ED +L
Sbjct: 12  WHSR-RGMLELDVLLVPFTQEVYPTLNETDRELYVRLLSCEDQDMFGWFMERTESEDPEL 70

Query: 113 CNSVNYFINR 122
              V   ++R
Sbjct: 71  QRMVRIILDR 80


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.321    0.138    0.397 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,166,350
Number of Sequences: 539616
Number of extensions: 3187991
Number of successful extensions: 7767
Number of sequences better than 100.0: 25
Number of HSP's better than 100.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 8
Number of HSP's that attempted gapping in prelim test: 7725
Number of HSP's gapped (non-prelim): 33
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)