Query 028289
Match_columns 211
No_of_seqs 125 out of 204
Neff 4.7
Searched_HMMs 13730
Date Mon Mar 25 15:01:57 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028289.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/028289hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1i2ha_ b.55.1.4 (A:) Homer {R 50.5 21 0.0016 26.7 6.7 93 13-122 5-111 (145)
2 d2fjla1 b.55.1.1 (A:1-37,A:87- 43.8 35 0.0026 21.7 7.4 58 63-122 40-100 (101)
3 d1ew3a_ b.60.1.1 (A:) Lipocali 43.0 38 0.0028 23.1 6.9 55 69-123 81-138 (159)
4 d3bwuc1 b.1.11.1 (C:1-121) Per 42.3 49 0.0036 22.9 8.8 74 25-101 3-85 (121)
5 d1dfca2 b.42.5.1 (A:1141-1259) 41.2 15 0.0011 26.7 4.4 32 13-44 70-104 (119)
6 d1v5ma_ b.55.1.1 (A:) SH2 and 38.9 31 0.0023 23.6 5.8 41 83-124 93-133 (136)
7 d1uema_ b.1.2.1 (A:) KIAA1568 33.2 47 0.0034 21.7 5.8 68 40-107 22-95 (117)
8 d3bb6a1 b.82.2.13 (A:1-109) Un 33.1 65 0.0047 22.7 6.7 50 38-90 41-98 (109)
9 d1v89a_ b.55.1.1 (A:) Rho-GTPa 32.5 57 0.0042 20.8 7.1 54 71-124 54-115 (118)
10 d2j59m1 b.55.1.1 (M:931-1063) 31.6 34 0.0025 23.0 4.8 51 72-124 62-112 (133)
11 d1fltx_ b.1.1.4 (X:) Second do 29.9 14 0.00099 25.3 2.3 33 8-40 30-62 (95)
12 d1wg7a_ b.55.1.1 (A:) Dedicato 29.7 77 0.0056 21.5 9.0 101 19-124 19-127 (150)
13 d2aj7a1 b.158.1.1 (A:1-148) Hy 28.1 20 0.0015 26.5 3.2 38 63-106 16-54 (148)
14 d2cuma1 b.1.2.1 (A:7-99) Tenas 27.9 63 0.0046 19.9 6.8 66 40-105 8-74 (93)
15 d1plsa_ b.55.1.1 (A:) Pleckstr 27.3 55 0.004 20.9 5.2 37 83-122 66-102 (113)
16 d2qqra2 b.34.9.1 (A:956-1011) 24.9 22 0.0016 22.6 2.5 30 70-99 2-31 (56)
17 d2hx0a1 d.290.1.3 (A:6-141) Hy 24.8 17 0.0012 26.2 2.1 26 81-122 4-29 (136)
18 d2ibga1 b.1.2.1 (A:573-667) He 24.8 57 0.0041 20.2 4.7 77 30-106 3-87 (95)
19 d2adza1 b.55.1.1 (A:1-43,A:117 24.5 40 0.0029 23.9 4.1 39 81-121 66-104 (105)
20 d1u5da1 b.55.1.1 (A:108-213) S 24.4 60 0.0044 20.4 4.9 36 84-122 69-104 (106)
21 d2d7na1 b.1.18.10 (A:8-87) Fil 23.1 11 0.00079 24.8 0.7 45 17-61 8-52 (80)
22 d1zaka2 g.41.2.1 (A:128-158) M 21.8 12 0.00086 21.4 0.5 15 77-91 3-17 (31)
23 d2h6la1 d.290.1.3 (A:1-138) Hy 21.6 17 0.0013 25.9 1.6 26 81-122 7-32 (138)
24 d1faoa_ b.55.1.1 (A:) Dual ada 20.4 98 0.0072 19.4 8.2 36 83-122 64-99 (100)
25 d1p5va1 b.1.11.1 (A:7-147) Cha 20.1 1.4E+02 0.01 21.0 10.2 78 20-102 5-92 (141)
No 1
>d1i2ha_ b.55.1.4 (A:) Homer {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=50.53 E-value=21 Score=26.70 Aligned_cols=93 Identities=22% Similarity=0.274 Sum_probs=60.2
Q ss_pred CceeEEEeceeeEecC--Cc-EEecCCCcEEEEE--eC-CCCceEEEEeeCCCCCcccceEeeCCceEEEEecc-----C
Q 028289 13 QEILLEFRAGKMTFDG--KK-VVPDSRKGLVRIA--RG-EHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-----A 81 (211)
Q Consensus 13 ~~~LieFkAGKm~~~g--~~-V~Pd~rKG~l~l~--~~-edgl~hf~W~~R~t~~vEddlIlfPgea~F~kV~~-----~ 81 (211)
..+++..||=-|.+|+ |+ -.|. -+|...|. .+ ....+++.= +.+..+-.+-.|.|| .+|.++.+ .
T Consensus 5 E~~i~~~rA~V~~~d~~tkk~W~P~-s~~~s~V~i~~~~~~~~yRIvg--~~d~~vvin~~i~~~-l~y~kas~~FhqWr 80 (145)
T d1i2ha_ 5 EQPIFSTRAHVFQIDPNTKKNWVPT-SKHAVTVSYFYDSTRNVYRIIS--LDGSKAIINSTITPN-MTFTKTSQKFGQWA 80 (145)
T ss_dssp SCCSEEEEEEEEEECTTSSCCSEES-CSSCEEEEEEEETTTTEEEEEE--EETTEEEEEEECCTT-CCEEEEETTEEEEE
T ss_pred ccceeEEEEEEEEECCCCCceeEEC-CCCceEEEEEEcCCCceEEEEE--ecCCeEEEEeeccCC-ceeeecccceeEee
Confidence 3579999999999985 33 6775 46776653 32 334444333 444455566666665 77888864 3
Q ss_pred C---CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 82 S---GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 82 t---GRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
+ .+||=|.|.+ .+.-..+.+.|+++++.
T Consensus 81 d~r~~~V~GL~F~s-------------~~da~~F~~~~~~ale~ 111 (145)
T d1i2ha_ 81 DSRANTVYGLGFSS-------------EHHLSKFAEKFQEFKEA 111 (145)
T ss_dssp ETTTTEEEEEEESS-------------HHHHHHHHHHHHHHHHH
T ss_pred eccccceeecccCC-------------HHHHHHHHHHHHHHHHH
Confidence 3 4699999952 23344788888888875
No 2
>d2fjla1 b.55.1.1 (A:1-37,A:87-150) Phosphoinositide phospholipase C, PLC-gamma-1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=43.80 E-value=35 Score=21.67 Aligned_cols=58 Identities=10% Similarity=0.117 Sum_probs=37.2
Q ss_pred ccceEeeCCceEEEEecc-CCCe--EEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 63 EDDQIVFPHEAVFEKVNQ-ASGR--VYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 63 EddlIlfPgea~F~kV~~-~tGR--VyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
....|.+.+ ++...++. ..++ +|.|.....+. .-|-+|-.+.+.=.+++..|++++..
T Consensus 40 ~~~~i~l~~-~~v~~~~~~~~~~~~~f~i~~~~~~~-~~~~~~a~s~~e~~~Wi~ai~~~~~~ 100 (101)
T d2fjla1 40 LRGVLDVPA-CQIAIRPEGKNNRLFVFSISMPSVAQ-WSLDVAADSQEELQDWVKKIREVAQT 100 (101)
T ss_dssp CCEEECSTT-CEEEEETTCSSSCSCEEEEECTTTSS-CCEEEEESSHHHHHHHHHHHHHHHTT
T ss_pred ecceEEcCC-ceeEeeeeecccccceeEEecccccc-EEEEEEeCCHHHHHHHHHHHHHHHhc
Confidence 344555544 66666665 5565 55555543333 34678888887777999999998753
No 3
>d1ew3a_ b.60.1.1 (A:) Lipocalin allergen {Horse (Equus caballus), equ c 1 [TaxId: 9796]}
Probab=43.04 E-value=38 Score=23.06 Aligned_cols=55 Identities=9% Similarity=0.174 Sum_probs=37.3
Q ss_pred eCCceEEEEecc-CC--CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCC
Q 028289 69 FPHEAVFEKVNQ-AS--GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRP 123 (211)
Q Consensus 69 fPgea~F~kV~~-~t--GRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~p 123 (211)
+|+...+.-+.- .+ --||.-+........+.|+-.++.+.+++..+++.+.+..-
T Consensus 81 ~~~~~~~~vl~tdy~~y~i~y~~~~~~~~~~~~~~ilsR~~~~~~~~~~~~~~~~~~~ 138 (159)
T d1ew3a_ 81 YDGYNVFRISEFENDEHIILYLVNFDKDRPFQLFEFYAREPDVSPEIKEEFVKIVQKR 138 (159)
T ss_dssp SSSEEEEEEEEESSTTEEEEEEEECCSSCCEEEEEEEESSSSCCHHHHHHHHHHHHHT
T ss_pred ccCceEEEEEEecCcceEEEEEEccCCCCccEEEEEEeCCCCCCHHHHHHHHHHHHHc
Confidence 445444443333 22 23455555445677889999999999999999999998864
No 4
>d3bwuc1 b.1.11.1 (C:1-121) Periplasmic chaperone FimC {Escherichia coli [TaxId: 562]}
Probab=42.30 E-value=49 Score=22.92 Aligned_cols=74 Identities=16% Similarity=0.403 Sum_probs=43.9
Q ss_pred EecCCcE-Ee-cCCCcEEEEEeC-CCC-ceEEEEeeCCCCCcccceEeeCCceEEEEeccCCCeEEEE-EEcC----CCc
Q 028289 25 TFDGKKV-VP-DSRKGLVRIARG-EHG-LIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQASGRVYIL-KFNT----DDR 95 (211)
Q Consensus 25 ~~~g~~V-~P-d~rKG~l~l~~~-edg-l~hf~W~~R~t~~vEddlIlfPgea~F~kV~~~tGRVyvL-kF~s----s~~ 95 (211)
.+++++| -+ ....+.+.+... ++. .+-..|.+..++..+.+||+.|- +.|++.....+..+ +... .++
T Consensus 3 ~l~~TRvI~~~~~~~~~~~i~N~~~~~~~lvq~wv~~~d~~~~~~fivtPP---l~rl~p~~~q~vRI~~~~~~~lp~dr 79 (121)
T d3bwuc1 3 ALGATRVIYPAGQKQEQLAVTNNDENSTYLIQSWVENADGVKDGRFIVTPP---LFAMKGKKENTLRILDATNNQLPQDR 79 (121)
T ss_dssp EESCSEEEEETTCSEEEEEEEECCTTCEEEEEEEEEETTSCCCSSEEEESS---EEEEESSEEEEEEEEECSTTCSCSSS
T ss_pred eECceEEEEcCCCceEEEEEEECCCCccEEEEEEEEcCCCCcCCCeeECCC---cEEeCCCCeeEEEEEecCCCCCCCCe
Confidence 4566654 33 334556666554 344 45578988777767788999996 66777633322222 2211 245
Q ss_pred eeEEEc
Q 028289 96 KFFLWM 101 (211)
Q Consensus 96 k~FFWm 101 (211)
-..||+
T Consensus 80 Eslf~l 85 (121)
T d3bwuc1 80 ESLFWM 85 (121)
T ss_dssp CEEEEE
T ss_pred EEEEEE
Confidence 678887
No 5
>d1dfca2 b.42.5.1 (A:1141-1259) Fascin {Human (Homo sapiens) [TaxId: 9606]}
Probab=41.21 E-value=15 Score=26.72 Aligned_cols=32 Identities=31% Similarity=0.712 Sum_probs=26.4
Q ss_pred CceeEEEeceeeEe---cCCcEEecCCCcEEEEEe
Q 028289 13 QEILLEFRAGKMTF---DGKKVVPDSRKGLVRIAR 44 (211)
Q Consensus 13 ~~~LieFkAGKm~~---~g~~V~Pd~rKG~l~l~~ 44 (211)
..-.++||+|+.-+ +|+..+|.--+|+|...+
T Consensus 70 t~Ftle~~~G~vA~rD~~G~yL~p~G~~g~Lk~gk 104 (119)
T d1dfca2 70 TGYTLEFRSGKVAFRDCEGRYLAPSGPSGTLKAGK 104 (119)
T ss_dssp GCEEEEECSSEEEEEESSSCBEEECSSSCCEEECS
T ss_pred cEEEEEEeCCeEEEEcCCCCEEeccCCCceEEcCC
Confidence 35678999999866 468899999999998854
No 6
>d1v5ma_ b.55.1.1 (A:) SH2 and PH domain-containing adapter protein APS {Mouse (Mus musculus) [TaxId: 10090]}
Probab=38.92 E-value=31 Score=23.60 Aligned_cols=41 Identities=0% Similarity=0.084 Sum_probs=27.7
Q ss_pred CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 028289 83 GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (211)
Q Consensus 83 GRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~p~ 124 (211)
.|-|++.....+.+.|+ +|-.+.+.=.++++.|+.+|+.++
T Consensus 93 ~~~~~F~l~t~~~~~y~-f~A~s~~e~~~Wv~ai~~ai~~~~ 133 (136)
T d1v5ma_ 93 EKDNTFVLKVENGAEYI-LETIDSLQKHSWVADIQGCVDSGP 133 (136)
T ss_dssp CCTTEECCBCTTSCBEE-EECSSHHHHHHHHHHHHHHHHHSC
T ss_pred CCCcEEEEEcCCCcEEE-EECCCHHHHHHHHHHHHHHHhcCC
Confidence 34344444344555444 788888777799999999998654
No 7
>d1uema_ b.1.2.1 (A:) KIAA1568 protein {Human (Homo sapiens) [TaxId: 9606]}
Probab=33.23 E-value=47 Score=21.74 Aligned_cols=68 Identities=7% Similarity=0.207 Sum_probs=38.9
Q ss_pred EEEEeCCCCceEEEEeeCCCCCcc-cceEe----eCCceEEEEecc-CCCeEEEEEEcCCCceeEEEccCCCch
Q 028289 40 VRIARGEHGLIHFQWLDRTRNVVE-DDQIV----FPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLWMQEPKAE 107 (211)
Q Consensus 40 l~l~~~edgl~hf~W~~R~t~~vE-ddlIl----fPgea~F~kV~~-~tGRVyvLkF~ss~~k~FFWmQe~~~~ 107 (211)
+.+..-.+.-+.+.|.+-..+..+ ..++| ..++..|..+.. .+...|.++-...+..|.|+++-.|..
T Consensus 22 ~~v~~~~~~sv~l~W~p~~~~~~~i~~Y~v~~~~~~~~~~~~~~~~~~~~~~~~v~~L~p~t~Y~frV~A~N~~ 95 (117)
T d1uema_ 22 PQVTDVTKNSVTLSWQPGTPGTLPASAYIIEAFSQSVSNSWQTVANHVKTTLYTVRGLRPNTIYLFMVRAINPQ 95 (117)
T ss_dssp CEEEEECSSCEEEECCCCBCSSSCCCEEEEEEEETTTEEEEEEEEEEECSSEEEECSCCTTCEEEEEEEEEETT
T ss_pred CEEEEccCCEEEEEEECCCcCCCCeEEEEEEEeccCCceeeEEeccccccccceECCCCCCCEEEEEEEEEeCC
Confidence 344333445678888755433222 22322 123445666654 445677777666788899999876543
No 8
>d3bb6a1 b.82.2.13 (A:1-109) Uncharacterized protein YeaR {Escherichia coli [TaxId: 562]}
Probab=33.08 E-value=65 Score=22.71 Aligned_cols=50 Identities=6% Similarity=0.238 Sum_probs=27.1
Q ss_pred cEEEEEeCCCCceEEE-EeeCCCCCcccceEeeCCce------EEEEecc-CCCeEEEEEE
Q 028289 38 GLVRIARGEHGLIHFQ-WLDRTRNVVEDDQIVFPHEA------VFEKVNQ-ASGRVYILKF 90 (211)
Q Consensus 38 G~l~l~~~edgl~hf~-W~~R~t~~vEddlIlfPgea------~F~kV~~-~tGRVyvLkF 90 (211)
|.|+|.+ |-+.|. ..+......|.++++-+|+. .+.+|+. +++-.|.|.|
T Consensus 41 g~l~Vl~---G~L~y~~~~d~~~~~~e~~~~~~ag~~~~~~Pq~wH~Ve~lsdD~~f~v~F 98 (109)
T d3bb6a1 41 PRLSVMH---GAVKYLGYADEHSAEPDQVILIEAGQFAVFPPEKWHNIEAMTDDTYFNIDF 98 (109)
T ss_dssp EEEEEEE---SEEEEEEESSTTCSSCSEEEEEEBTBEEECCSSCEEEEEESSTTCEEEEEE
T ss_pred EEEEEEE---EEEEEEEeccCCCCCcceEEEecCCCceeeCCCccEEeEECCCCEEEEEEE
Confidence 4566654 445543 45544444444444444433 3677776 6666666666
No 9
>d1v89a_ b.55.1.1 (A:) Rho-GTPase-activating protein 25 (KIAA0053) {Human (Homo sapiens) [TaxId: 9606]}
Probab=32.49 E-value=57 Score=20.84 Aligned_cols=54 Identities=6% Similarity=-0.005 Sum_probs=32.7
Q ss_pred CceEEEEecc--CCCe--EEEEEEcCCCc----eeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 028289 71 HEAVFEKVNQ--ASGR--VYILKFNTDDR----KFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (211)
Q Consensus 71 gea~F~kV~~--~tGR--VyvLkF~ss~~----k~FFWmQe~~~~~D~~~~~~vN~~i~~p~ 124 (211)
.++....|.. ..++ +|-|....... ..=|.||-.+.+.=.+++..|+.+++..+
T Consensus 54 ~~~~~~~~~~~~~~~~~~~f~l~~~~~~~~~~~~~~~~~~a~s~ee~~~Wi~aI~~a~~~~p 115 (118)
T d1v89a_ 54 PGCTIKEIATNPEEAGKFVFEIIPASWDQNRMGQDSYVLMASSQAEMEEWVKFLRRVAGSGP 115 (118)
T ss_dssp TTEEEEEECCCSSCCCCCEEEEEESCCSSCCSSCCCEEEECSSHHHHHHHHHHHHHHHHCCS
T ss_pred CceEEEEeccccccCCCcEEEEecCCCcceecCCcEEEEEcCCHHHHHHHHHHHHHHHccCC
Confidence 3455666643 3344 44444332211 12256788787777799999999998764
No 10
>d2j59m1 b.55.1.1 (M:931-1063) Rho GTPase-activating protein 21 {Human (Homo sapiens) [TaxId: 9606]}
Probab=31.62 E-value=34 Score=23.02 Aligned_cols=51 Identities=10% Similarity=0.137 Sum_probs=35.4
Q ss_pred ceEEEEeccCCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 028289 72 EAVFEKVNQASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (211)
Q Consensus 72 ea~F~kV~~~tGRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~p~ 124 (211)
.++....+..++|-|++...++++.|+ +|-.+.+.=.+++..|+..++...
T Consensus 62 ~~~v~~~~~~~~r~~~F~i~~~~~~~~--f~A~s~~e~~~Wi~ai~~a~~~~~ 112 (133)
T d2j59m1 62 ACLIDISYSETKRKNVFRLTTSDCECL--FQAEDRDDMLAWIKTIQESSNLNE 112 (133)
T ss_dssp SCEEEECSSSCSCSSEEEEECSSCEEE--EECSSHHHHHHHHHHHHHHCCCCH
T ss_pred ceEEEEcccccccCceeEEecCCCEEE--EEeCCHHHHHHHHHHHHHHHhccc
Confidence 355544444566755566556666644 688888777899999999987654
No 11
>d1fltx_ b.1.1.4 (X:) Second domain of the Flt-1 receptor {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.92 E-value=14 Score=25.35 Aligned_cols=33 Identities=36% Similarity=0.623 Sum_probs=24.2
Q ss_pred cCCCCCceeEEEeceeeEecCCcEEecCCCcEE
Q 028289 8 ASPAMQEILLEFRAGKMTFDGKKVVPDSRKGLV 40 (211)
Q Consensus 8 ~~~~~~~~LieFkAGKm~~~g~~V~Pd~rKG~l 40 (211)
..|...-.|.++..|+..-+|+.++.|++||.+
T Consensus 30 T~P~~~VtL~~~~~~~~~p~g~~v~~Dpk~Gf~ 62 (95)
T d1fltx_ 30 TSPNITVTLKKFPLDTLIPDGKRIIWDSRKGFI 62 (95)
T ss_dssp SCTTSCCEEEETTTEEECCCSSSEEEETTTEEE
T ss_pred CCCCceeEEEeccCCccCCCCCEEEECCCCCEE
Confidence 345555567676666666688889999999975
No 12
>d1wg7a_ b.55.1.1 (A:) Dedicator of cytokinesis protein 9, DOCK9 {Human (Homo sapiens) [TaxId: 9606]}
Probab=29.75 E-value=77 Score=21.47 Aligned_cols=101 Identities=10% Similarity=0.109 Sum_probs=54.3
Q ss_pred EeceeeEecCCc------EEecCCCcEEEEEeCCCCceEEEE-eeCCCCCcccceEeeCCceEEEEecc-CCCeEEEEEE
Q 028289 19 FRAGKMTFDGKK------VVPDSRKGLVRIARGEHGLIHFQW-LDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKF 90 (211)
Q Consensus 19 FkAGKm~~~g~~------V~Pd~rKG~l~l~~~edgl~hf~W-~~R~t~~vEddlIlfPgea~F~kV~~-~tGRVyvLkF 90 (211)
+|.|-+...+.. +.. =.|-+..|....++...+.+ ++..........|...+ ++...... ....+|.|.+
T Consensus 19 ~k~G~L~K~~~~~~~~~~~k~-WkkR~fvL~~~~~~~~~L~yy~~~~~~~~~~g~i~l~~-~~~~~~~~~~~~~~F~i~~ 96 (150)
T d1wg7a_ 19 TKHGWLYKGNMNSAISVTMRS-FKRRFFHLIQLGDGSYNLNFYKDEKISKEPKGSIFLDS-CMGVVQNNKVRRFAFELKM 96 (150)
T ss_dssp CCEEEEEECCCCSSHHHHHSS-CEEEEEEEEECSSSCEEEEEESSSCCSSCCSEEECTTT-CCEECCCCSSCTTEEEEEC
T ss_pred eEEEEEEEecCCCCccccccc-ceEEEEEEEcCcCCceeEEEEecccccccccccccccc-ccccccCccccceEEEEEc
Confidence 477877654421 111 13345555554444444444 33333222333444433 33333333 4457777776
Q ss_pred cCCCceeEEEccCCCchhhHHHHHHHHHHhcCCc
Q 028289 91 NTDDRKFFLWMQEPKAEEDSQLCNSVNYFINRPL 124 (211)
Q Consensus 91 ~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~p~ 124 (211)
. +.+ .|-||-.+.+.=.+++..|+.+|+...
T Consensus 97 ~--~~~-~~~l~A~s~~e~~~Wi~aL~~~i~~~~ 127 (150)
T d1wg7a_ 97 Q--DKS-SYLLAADSEVEMEEWITILNKILQLNF 127 (150)
T ss_dssp S--SSC-EEEEECSSHHHHHHHHHHHHHHHHHHH
T ss_pred C--CCe-EEEEEeCCHHHHHHHHHHHHHHHHhhh
Confidence 3 333 344888888777799999999997643
No 13
>d2aj7a1 b.158.1.1 (A:1-148) Hypothetical protein BH3618 {Bacillus halodurans [TaxId: 86665]}
Probab=28.06 E-value=20 Score=26.52 Aligned_cols=38 Identities=18% Similarity=0.262 Sum_probs=21.6
Q ss_pred ccceEeeCCceEEEEecc-CCCeEEEEEEcCCCceeEEEccCCCc
Q 028289 63 EDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLWMQEPKA 106 (211)
Q Consensus 63 EddlIlfPgea~F~kV~~-~tGRVyvLkF~ss~~k~FFWmQe~~~ 106 (211)
|+++|-||.- +.. ..=|=|+|-- .....-|||||+-+.
T Consensus 16 e~~ii~Fp~G-----i~GFe~~~~F~L~~-~~~~~pf~~LqS~d~ 54 (148)
T d2aj7a1 16 EDRLIAFDQG-----IPAFEDEKEFVLLP-FAAGTPYYTLQSTKT 54 (148)
T ss_dssp GGGEEECTTC-----BTTBTTCCEEEEEE-SSTTSCEEEEEESSC
T ss_pred hhcEEEcCCC-----CCCCCcccEEEEEE-CCCCCcEEEEEEcCC
Confidence 4666666642 223 3334555543 233446999999776
No 14
>d2cuma1 b.1.2.1 (A:7-99) Tenascin-X {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.86 E-value=63 Score=19.88 Aligned_cols=66 Identities=5% Similarity=-0.139 Sum_probs=33.3
Q ss_pred EEEEeCCCCceEEEEeeCCCCCcccceEeeCCceEEEEecc-CCCeEEEEEEcCCCceeEEEccCCC
Q 028289 40 VRIARGEHGLIHFQWLDRTRNVVEDDQIVFPHEAVFEKVNQ-ASGRVYILKFNTDDRKFFLWMQEPK 105 (211)
Q Consensus 40 l~l~~~edgl~hf~W~~R~t~~vEddlIlfPgea~F~kV~~-~tGRVyvLkF~ss~~k~FFWmQe~~ 105 (211)
|.+..-...-+++.|.+-......-.+..-+.+.....+.- .+-+-|.|.=...+..|-|+++--+
T Consensus 8 l~~~~~~~~sv~l~W~~p~~~~~~Y~v~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V~a~~ 74 (93)
T d2cuma1 8 LEAKEVTPRTALLTWTEPPVRPAGYLLSFHTPGGQTQEILLPGGITSHQLLGLFPSTSYNARLQAMW 74 (93)
T ss_dssp EEEESCCSSCEEEEEECCSSCCSEEEEEEECTTSCEEEEEECSSCSEEEECSCCTTCEEEEEEEEEB
T ss_pred CEEEEeCCCEEEEEEEccccccccEEEEEEccccccEEEEECCCccEEEEeCccCCCEEEEEEEEEe
Confidence 45544455678888876433211122222233333333322 3334566665566778888877544
No 15
>d1plsa_ b.55.1.1 (A:) Pleckstrin {Human (Homo sapiens) [TaxId: 9606]}
Probab=27.33 E-value=55 Score=20.89 Aligned_cols=37 Identities=19% Similarity=0.215 Sum_probs=25.1
Q ss_pred CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 83 GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 83 GRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
..+|.|... +++.++ +|-.+.+.=.+++..|+.+|..
T Consensus 66 ~~~f~l~~~-~~~~~~--~~a~s~~e~~~Wi~ai~~ai~~ 102 (113)
T d1plsa_ 66 MFVFKITTT-KQQDHF--FQAAFLEERDAWVRDINKAIKC 102 (113)
T ss_dssp SSEEEEEET-TTEEEE--EECSSHHHHHHHHHHHHHHHHH
T ss_pred ceEEEEecC-CCeEEE--EECCCHHHHHHHHHHHHHHHHh
Confidence 346666552 334443 4777777777999999999875
No 16
>d2qqra2 b.34.9.1 (A:956-1011) Jumonji domain-containing protein 2A {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.88 E-value=22 Score=22.65 Aligned_cols=30 Identities=27% Similarity=0.334 Sum_probs=17.4
Q ss_pred CCceEEEEeccCCCeEEEEEEcCCCceeEE
Q 028289 70 PHEAVFEKVNQASGRVYILKFNTDDRKFFL 99 (211)
Q Consensus 70 Pgea~F~kV~~~tGRVyvLkF~ss~~k~FF 99 (211)
|.+.+...|+=++|.+|-=+|.++.-.+.|
T Consensus 2 P~~Ge~V~VrW~DG~~y~A~f~~~~~~~~Y 31 (56)
T d2qqra2 2 PAEGEVVQVRWTDGQVYGAKFVASHPIQMY 31 (56)
T ss_dssp CCTTCEEEEECTTSCEEEEEEEEEEEEEEE
T ss_pred CCCCcEEEEEcCCCCEEEEEEEecceeEEE
Confidence 445555666556677777777655443333
No 17
>d2hx0a1 d.290.1.3 (A:6-141) Hypothetical protein STM3071 {Salmonella typhimurium [TaxId: 90371]}
Probab=24.80 E-value=17 Score=26.19 Aligned_cols=26 Identities=15% Similarity=0.479 Sum_probs=19.3
Q ss_pred CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 81 ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 81 ~tGRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
++||||+|++. ..+++++.|.++...
T Consensus 4 ~~~R~~~lrl~----------------~Gedl~~~i~~~~~~ 29 (136)
T d2hx0a1 4 STARFYALRLL----------------PGQEVFSQLHAFVQQ 29 (136)
T ss_dssp CCCEEEEEEEC----------------TTCBHHHHHHHHHHH
T ss_pred CCCcEEEEEEC----------------CCChHHHHHHHHHHH
Confidence 68999999993 234677777777653
No 18
>d2ibga1 b.1.2.1 (A:573-667) Hedgehog receptor iHog {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}
Probab=24.80 E-value=57 Score=20.22 Aligned_cols=77 Identities=12% Similarity=0.110 Sum_probs=36.6
Q ss_pred cEEecCCCcEEEEEeCCCCceEEEEeeC-CCCCcc-cceEee----CCceEEEEe--ccCCCeEEEEEEcCCCceeEEEc
Q 028289 30 KVVPDSRKGLVRIARGEHGLIHFQWLDR-TRNVVE-DDQIVF----PHEAVFEKV--NQASGRVYILKFNTDDRKFFLWM 101 (211)
Q Consensus 30 ~V~Pd~rKG~l~l~~~edgl~hf~W~~R-~t~~vE-ddlIlf----Pgea~F~kV--~~~tGRVyvLkF~ss~~k~FFWm 101 (211)
.+.|.+....|++..-...-+.+.|..- ..+... .-+.|. ..+..++.+ ...+-+-|.|.=...+..|.|.+
T Consensus 3 ~~~P~~~P~~~~v~~~s~tsv~l~W~~P~~~~~~~i~gY~i~y~~~~~~~~~~~~~~~~~~~~~~~i~~L~p~t~Y~~~V 82 (95)
T d2ibga1 3 ALDPMPVPELLEIEEYSETAVVLHWSLASDADEHLITGYYAYYRPSSSAGEYFKATIEGAHARSFKIAPLETATMYEFKL 82 (95)
T ss_dssp TSCCCCCCEECCCBCCSSSCEEEEEECCTTCCGGGCCEEEEEEEETTCCSCCEEEEEECTTCCEEEECSCCTTCEEEEEE
T ss_pred CCCCCCCCcCeEEEEeCCCEEEEEEEeeeeccCCcccccceeEeeeeecceeeeeeccCCceeEEEEeeccCCeEEEEEE
Confidence 3445555555555444455677777632 222111 112221 122223322 22344556665555677788887
Q ss_pred cCCCc
Q 028289 102 QEPKA 106 (211)
Q Consensus 102 Qe~~~ 106 (211)
|-.+.
T Consensus 83 ~A~n~ 87 (95)
T d2ibga1 83 QSFSA 87 (95)
T ss_dssp EEECS
T ss_pred EEEeC
Confidence 76554
No 19
>d2adza1 b.55.1.1 (A:1-43,A:117-178) Alpha-1-syntrophin {Mouse (Mus musculus) [TaxId: 10090]}
Probab=24.46 E-value=40 Score=23.91 Aligned_cols=39 Identities=8% Similarity=0.111 Sum_probs=33.1
Q ss_pred CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhc
Q 028289 81 ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFIN 121 (211)
Q Consensus 81 ~tGRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~ 121 (211)
+.+|.+-|. |.+.++.-+|+-++...-..+++.|...|+
T Consensus 66 ~EnR~lElh--SpDG~~t~iLR~kD~a~A~~WF~Aihs~i~ 104 (105)
T d2adza1 66 PEPRYLEIC--AADGQDAVFLRAKDEASARSWAGAIQAQIG 104 (105)
T ss_dssp CSSCEEEEE--ETTTTEEEEECCSSHHHHHHHHHHHHHHHT
T ss_pred CcccEEEEE--CCCCCceEEEEcCCHHHHHHHHHHHHHhhc
Confidence 568888776 678999999999999887899999888775
No 20
>d1u5da1 b.55.1.1 (A:108-213) Src kinase-associated phosphoprotein SKAP55 (SCAP1) {Human (Homo sapiens) [TaxId: 9606]}
Probab=24.44 E-value=60 Score=20.36 Aligned_cols=36 Identities=11% Similarity=0.270 Sum_probs=25.6
Q ss_pred eEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 84 RVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 84 RVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
.+|.+... +++ -|++|-.+.+.=.+++..||.+|.+
T Consensus 69 ~~f~i~~~-~~~--~~~f~a~s~~e~~~W~~ai~~~i~~ 104 (106)
T d1u5da1 69 SCFELTSQ-DRR--TYEFTATSPAEARDWVDQISFLLKD 104 (106)
T ss_dssp GEEEEECS-SSC--CEEEECSSHHHHHHHHHHHHHHHHH
T ss_pred eeEEEEcC-CCc--EEEEEeCCHHHHHHHHHHHHHHHHH
Confidence 46666653 223 4567888887777999999999853
No 21
>d2d7na1 b.1.18.10 (A:8-87) Filamin C {Human (Homo sapiens) [TaxId: 9606]}
Probab=23.14 E-value=11 Score=24.81 Aligned_cols=45 Identities=16% Similarity=0.349 Sum_probs=31.3
Q ss_pred EEEeceeeEecCCcEEecCCCcEEEEEeCCCCceEEEEeeCCCCC
Q 028289 17 LEFRAGKMTFDGKKVVPDSRKGLVRIARGEHGLIHFQWLDRTRNV 61 (211)
Q Consensus 17 ieFkAGKm~~~g~~V~Pd~rKG~l~l~~~edgl~hf~W~~R~t~~ 61 (211)
|.+.+|+-++.-+...|+-+.-.+.|....||.+.+.|.+.+.+.
T Consensus 8 i~~~~~~g~l~~~v~~P~G~~~~~~v~~~~dg~y~v~y~P~~~G~ 52 (80)
T d2d7na1 8 IPFAVQKGELTGEVRMPSGKTARPNITDNKDGTITVRYAPTEKGL 52 (80)
T ss_dssp ECCCCSSSCEEEEEECTTSCEECCEEEECSSSCEEEEECCSSCEE
T ss_pred EecCCCCCcEEEEEECCCCCEeceEEEECCCCEEEEEEEECCcEE
Confidence 344555555555566777665566777778899999999988863
No 22
>d1zaka2 g.41.2.1 (A:128-158) Microbial and mitochondrial ADK, insert "zinc finger" domain {Maize (Zea mays) [TaxId: 4577]}
Probab=21.76 E-value=12 Score=21.36 Aligned_cols=15 Identities=27% Similarity=0.873 Sum_probs=12.5
Q ss_pred EeccCCCeEEEEEEc
Q 028289 77 KVNQASGRVYILKFN 91 (211)
Q Consensus 77 kV~~~tGRVyvLkF~ 91 (211)
++++.||.||-++|+
T Consensus 3 R~DP~TG~iYH~~f~ 17 (31)
T d1zaka2 3 RLDPVTGKIYHLKYS 17 (31)
T ss_dssp EECTTTCCEEESSSS
T ss_pred cCCCCCCcEeEEecC
Confidence 566679999999995
No 23
>d2h6la1 d.290.1.3 (A:1-138) Hypothetical protein AF0104 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=21.56 E-value=17 Score=25.85 Aligned_cols=26 Identities=15% Similarity=0.502 Sum_probs=19.1
Q ss_pred CCCeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 81 ASGRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 81 ~tGRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
+.||+|+|++. ..+++++.|.+++..
T Consensus 7 ~~gr~~~~rl~----------------~Gedl~~~l~~~~~~ 32 (138)
T d2h6la1 7 EVGKGFLLRLD----------------YGKDLVRQIEEFLEE 32 (138)
T ss_dssp ECCEEEEEECC----------------TTSBHHHHHHHHHHH
T ss_pred eCCCEEEEEEC----------------CCChHHHHHHHHHHH
Confidence 67999999993 234577777777754
No 24
>d1faoa_ b.55.1.1 (A:) Dual adaptor of phosphotyrosine and 3-phosphoinositides DAPP1/PHISH {Human (Homo sapiens) [TaxId: 9606]}
Probab=20.38 E-value=98 Score=19.40 Aligned_cols=36 Identities=11% Similarity=0.236 Sum_probs=25.2
Q ss_pred CeEEEEEEcCCCceeEEEccCCCchhhHHHHHHHHHHhcC
Q 028289 83 GRVYILKFNTDDRKFFLWMQEPKAEEDSQLCNSVNYFINR 122 (211)
Q Consensus 83 GRVyvLkF~ss~~k~FFWmQe~~~~~D~~~~~~vN~~i~~ 122 (211)
..+|.|.. +++. |.+|-.+.+.=.++++.|+..|+.
T Consensus 64 ~~~F~i~~--~~r~--~~l~a~s~~~~~~Wi~ai~~~i~~ 99 (100)
T d1faoa_ 64 VNCFCLVF--PFRT--FYLCAKTGVEADEWIKILRWKLSQ 99 (100)
T ss_dssp SSEEEEEE--TTEE--EEEECSSHHHHHHHHHHHHHHHHT
T ss_pred cccccccc--CCeE--EEEEeCCHHHHHHHHHHHHHHHhh
Confidence 44666654 3443 557888777667899999998864
No 25
>d1p5va1 b.1.11.1 (A:7-147) Chaperone protein Caf1m {Yersinia pestis [TaxId: 632]}
Probab=20.10 E-value=1.4e+02 Score=21.00 Aligned_cols=78 Identities=17% Similarity=0.300 Sum_probs=42.7
Q ss_pred eceeeEecCCcE-EecCCCc-EEEEEeCCCC--ceEEEEeeCCC--CCcccceEeeCCceEEEEeccCCCeEEEEEEcC-
Q 028289 20 RAGKMTFDGKKV-VPDSRKG-LVRIARGEHG--LIHFQWLDRTR--NVVEDDQIVFPHEAVFEKVNQASGRVYILKFNT- 92 (211)
Q Consensus 20 kAGKm~~~g~~V-~Pd~rKG-~l~l~~~edg--l~hf~W~~R~t--~~vEddlIlfPgea~F~kV~~~tGRVyvLkF~s- 92 (211)
.|| +.+++++| -+...|+ .|.|...++. |++ .|..... ...+..||+.|- +.|++....++..+....
T Consensus 5 ~~G-v~l~~TRvIy~~~~~~~s~~v~N~~~~p~lvQ-~wv~~~~~~~~~~~pfivtPP---l~rl~p~~~~~lRI~~~~~ 79 (141)
T d1p5va1 5 EYG-VTIGESRIIYPLDAAGVMVSVKNTQDYPVLIQ-SRIYDENKEKESEDPFVVTPP---LFRLDAKQQNSLRIAQAGG 79 (141)
T ss_dssp EEE-EEESCSEEEEETTCSCEEEEEEECSSSCEEEE-EEECC---------CEEEESS---EEEECTTCEEEEEEEECSC
T ss_pred eee-eEeCccEEEEcCCCcEEEEEEEeCCCCCEEEE-EEEEcCCCCcCCCCCeEEcCC---eEEECCCCceEEEEEecCC
Confidence 356 66788664 4444443 4566554443 455 3776543 233466999988 777877445444444422
Q ss_pred ---CCceeEEEcc
Q 028289 93 ---DDRKFFLWMQ 102 (211)
Q Consensus 93 ---s~~k~FFWmQ 102 (211)
.++-..||+-
T Consensus 80 ~lP~DrEslf~l~ 92 (141)
T d1p5va1 80 VFPRDKESLKWLC 92 (141)
T ss_dssp CCCSSSCEEEEEE
T ss_pred CCCCcceEEEEEE
Confidence 3567889974
Done!