BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028292
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 395 bits (1016), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/207 (89%), Positives = 204/207 (98%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
SS+SQ EFDYLFKLLLIGDSGVGKSTLLLSFTS+TFE+LSPTIGVDFK+KHV +GGKK+K
Sbjct: 101 SSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLK 160
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
LAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK
Sbjct: 161 LAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIK 220
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNKVDKESERVV+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLL
Sbjct: 221 MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 280
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+EGSSGV+KNIFK+ PP++DAST+GCC
Sbjct: 281 AEGSSGVRKNIFKQKPPESDASTSGCC 307
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 395 bits (1014), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/207 (89%), Positives = 204/207 (98%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
SS+SQ EFDYLFKLLLIGDSGVGKSTLLLSFTS+TFE+LSPTIGVDFK+KHV +GGKK+K
Sbjct: 5 SSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGKKLK 64
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
LAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK
Sbjct: 65 LAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIK 124
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNKVDKESERVV+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLL
Sbjct: 125 MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 184
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+EGSSGV+KNIFK+ PP++DAST+GCC
Sbjct: 185 AEGSSGVRKNIFKQKPPESDASTSGCC 211
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 386 bits (992), Expect = e-105, Method: Compositional matrix adjust.
Identities = 184/209 (88%), Positives = 198/209 (94%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKM 61
A S+SQ EFDYLFKLLLIGDSGVGKSTLLL FTSD+FE+LSPTIGVDFKIKHV +GGKK+
Sbjct: 4 APSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKL 63
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KLAIWDTAGQERFRTLT SYYRGAQGIIMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCI
Sbjct: 64 KLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCI 123
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
K+LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF+ELVLKILDTPSL
Sbjct: 124 KMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSL 183
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCCS 210
L++GS+G+KKNIFKE PP+ S GCCS
Sbjct: 184 LADGSTGLKKNIFKEKPPETTTSAGGCCS 212
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/205 (88%), Positives = 199/205 (97%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAI 65
+Q EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE+LSPTIGVDFK+K+V +GGKK KLAI
Sbjct: 10 TQPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAI 69
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LV
Sbjct: 70 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 129
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCF+ELV+KIL+TPSLL+EG
Sbjct: 130 GNKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEG 189
Query: 186 SSGVKKNIFKESPPQNDASTTGCCS 210
SSGVKKNIFK+ PPQ+DAS++GCCS
Sbjct: 190 SSGVKKNIFKQKPPQSDASSSGCCS 214
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 385 bits (990), Expect = e-105, Method: Compositional matrix adjust.
Identities = 181/209 (86%), Positives = 201/209 (96%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS++ QEFDYLFKLL+IGDSGVGKS+LLLSFTSD F+++SPTIGVDFK+K+VA+GGKK
Sbjct: 1 MDSSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKES+RVVSKKEGIDFAREYGCLF+ECSAKTRVNV+QCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+EGS GVKKNIFK+ PQ DAST+ CC
Sbjct: 181 LLAEGSKGVKKNIFKDKQPQADASTSSCC 209
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 182/210 (86%), Positives = 201/210 (95%), Gaps = 1/210 (0%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+SQ EFDYLFKLLLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+KHV +GGKK
Sbjct: 1 MESSSSQPEFDYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKHVTIGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+DIWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESE VV+KKEGI+FAR+YGCLFLECSAKTRVNVEQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESEIVVTKKEGIEFARQYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
LL+EGSSGVK+NIFK+ PPQ D T+ CC+
Sbjct: 181 LLAEGSSGVKRNIFKQKPPQ-DVPTSSCCT 209
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 385 bits (988), Expect = e-105, Method: Compositional matrix adjust.
Identities = 183/207 (88%), Positives = 200/207 (96%), Gaps = 1/207 (0%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
STSQQEF+YLFKLLLIGDSGVGKSTLLLSFTS FE+LSPTIGVDFK+KHV +GGKK+KL
Sbjct: 5 STSQQEFEYLFKLLLIGDSGVGKSTLLLSFTSKNFEDLSPTIGVDFKVKHVTIGGKKLKL 64
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL++IWAKEIDLYSTNQDCIK+
Sbjct: 65 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDCIKM 124
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKESERVV+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLL+
Sbjct: 125 LVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLLA 184
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
EGSSGVKKN+FK+ PP+ D +T+ CCS
Sbjct: 185 EGSSGVKKNVFKQKPPE-DVTTSSCCS 210
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 384 bits (985), Expect = e-104, Method: Compositional matrix adjust.
Identities = 180/207 (86%), Positives = 200/207 (96%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
SS++ QEFDYLFKLL+IGDSGVGKS+LLLSFTSD F+++SPTIGVDFK+K+VA+GGKK+K
Sbjct: 1 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 60
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL++IWAKEIDLYSTNQDCIK
Sbjct: 61 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 120
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNKVDKES+RVVSKKEGIDFAREYGCLF+ECSAKTRVNV+QCFEELVLKILDTPSLL
Sbjct: 121 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 180
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+EGS GVKKNIFK+ PQ DAST+ CC
Sbjct: 181 AEGSKGVKKNIFKDKQPQADASTSSCC 207
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 383 bits (984), Expect = e-104, Method: Compositional matrix adjust.
Identities = 179/209 (85%), Positives = 199/209 (95%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ QEFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVDFK+K+V +GGKK
Sbjct: 1 MDSSSEHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLT+SYYRGAQGIIMVYDVTRR TFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTNSYYRGAQGIIMVYDVTRRGTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKE +RVV+KKEGIDFAREYGCLF+ECSAKTRVNV+QCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
L++EGS GVKKNIFKE PPQ+DAST+ CC
Sbjct: 181 LIAEGSKGVKKNIFKERPPQSDASTSSCC 209
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 382 bits (982), Expect = e-104, Method: Compositional matrix adjust.
Identities = 181/204 (88%), Positives = 198/204 (97%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE+LSPTIGVDFK+K+V +GGKK+KLAIW
Sbjct: 10 QPEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGKKLKLAIW 69
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LVG
Sbjct: 70 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 129
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NKVDKESERVVSKKEGIDFAREYGCL+ ECSAKTRVNV QCF+ELV+KIL+TPSLL+EGS
Sbjct: 130 NKVDKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVTQCFDELVMKILETPSLLAEGS 189
Query: 187 SGVKKNIFKESPPQNDASTTGCCS 210
SGVKKNIFK+ PP +DAS++GCCS
Sbjct: 190 SGVKKNIFKQKPPLSDASSSGCCS 213
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 380 bits (976), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/209 (85%), Positives = 197/209 (94%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M S+++Q EFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVDFK+K+V GGKK
Sbjct: 1 MDSTSNQTEFDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+++WAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKES R V+KKEGID AREYGCLF ECSAKTRVNV+QCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LLSEGS GV++NIFKE PPQ+DAST+ CC
Sbjct: 181 LLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
>gi|224093425|ref|XP_002309918.1| predicted protein [Populus trichocarpa]
gi|222852821|gb|EEE90368.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 180/209 (86%), Positives = 198/209 (94%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+S EFDYLFKLL+IGDSGVGKS+LLLSFTSDTFE+LSPTIGVDFK+K V +GGKK
Sbjct: 1 MDSSSSSPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGI+MVYDVTRRDTFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIVMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IKLLVGNKVDKES+RVV+KKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLK+LDTPS
Sbjct: 121 IKLLVGNKVDKESDRVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+EGS GVKKNIF E PQ DAST+ CC
Sbjct: 181 LLAEGSKGVKKNIFNEKRPQPDASTSSCC 209
>gi|351721968|ref|NP_001235436.1| uncharacterized protein LOC100526880 [Glycine max]
gi|255631052|gb|ACU15890.1| unknown [Glycine max]
Length = 209
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 175/209 (83%), Positives = 197/209 (94%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ QEFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVD K+K+V +GGKK
Sbjct: 1 MDSSSGHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDIKVKYVMMGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+L GNK+DK+ +RVV+KKEGIDFAREYGCLF+ECSAKTRVNV+QCFEELVLKILDTPS
Sbjct: 121 IKMLAGNKLDKDGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
L++EGS GVKKNIFK+ PPQ+DAS + CC
Sbjct: 181 LIAEGSKGVKKNIFKDRPPQSDASASSCC 209
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/209 (85%), Positives = 199/209 (95%), Gaps = 1/209 (0%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M S +Q +F+YLFKLLLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+++V +GGKK
Sbjct: 1 MELSPNQSDFEYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVQYVTIGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+DIWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESERVVSKKEGIDFAR+YGCLF+ECSAKTR NVEQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERVVSKKEGIDFARQYGCLFIECSAKTRANVEQCFEELVLKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+EGSSGVKKNIFK+ PPQ D +T+ CC
Sbjct: 181 LLAEGSSGVKKNIFKQKPPQ-DVATSSCC 208
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/209 (85%), Positives = 196/209 (93%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS++ EFDYLFKLL+IGDSGVGKS+LLLSFTSDTFE+LSPTIGVDFK+K V +GGK
Sbjct: 1 MDSSSNAPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKN 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKES+R V+KKEGI+FAREYGCLF+ECSAKTRVNV+QCFEELVLKILDTPS
Sbjct: 121 IKMLVGNKVDKESDRAVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+EGS GVKKNIF E PQ DAST+ CC
Sbjct: 181 LLAEGSKGVKKNIFSEKRPQPDASTSSCC 209
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 173/203 (85%), Positives = 193/203 (95%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q EFDYLFKLLLIGDSGVGKS+LLL FT+D+FE+LSPTIGVDFK+K V++GGKK+KLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVSIGGKKLKLAIW 72
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILDTPSLL++ S
Sbjct: 133 NKVDKESERCVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
SG KKNIFK+ PP+ DA+ + CC
Sbjct: 193 SGAKKNIFKQKPPEADAAASSCC 215
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 371 bits (952), Expect = e-100, Method: Compositional matrix adjust.
Identities = 172/203 (84%), Positives = 192/203 (94%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q EFDYLFKLLLIGDSGVGKS+LLL FT+D+FE+LSPTIGVDFK+K V +GGKK+KLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIW 72
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILDTPSLL++ S
Sbjct: 133 NKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 192
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
SG KKNIFK+ PP+ DA+ + CC
Sbjct: 193 SGAKKNIFKQKPPEADAAASSCC 215
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 370 bits (950), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/209 (83%), Positives = 198/209 (94%), Gaps = 1/209 (0%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ QQEFDY+FKLL+IGDSGVGKS+LLL FTSD F++LSPTIGVDFK+K+V + GKK
Sbjct: 1 MDSSSGQQEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL++IWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+K+LVGNKVDKE +RVV+KKEGIDFAREYGCLF+ECSAKTRVNV+QCFEELVLK+LDTPS
Sbjct: 121 MKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+EGS GVKKNIFK+ PQ+DAS +GCC
Sbjct: 181 LLAEGSKGVKKNIFKD-KPQSDASASGCC 208
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium distachyon]
Length = 215
Score = 366 bits (939), Expect = 4e-99, Method: Compositional matrix adjust.
Identities = 171/206 (83%), Positives = 191/206 (92%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
+ Q +FDYLFKLLLIGDSGVGKS+LLL FT+D+FE+LSPTIGVDFK+K V + GKK+KL
Sbjct: 10 TAQQPDFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVNIAGKKLKL 69
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+
Sbjct: 70 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 129
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILDTPSLL+
Sbjct: 130 LVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLA 189
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
+ SSG KKNIFK+ P+ DA+ GCC
Sbjct: 190 DASSGAKKNIFKQKAPEADAAAGGCC 215
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 174/200 (87%), Positives = 191/200 (95%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q EFDYLFK+LLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+K++ +G KK
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+DIWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQ 200
L +EGSSG KKNIFK++P Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 365 bits (937), Expect = 6e-99, Method: Compositional matrix adjust.
Identities = 174/200 (87%), Positives = 191/200 (95%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q EFDYLFK+LLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+K++ +G KK
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+DIWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQ 200
L +EGSSG KKNIFK++P Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>gi|357464685|ref|XP_003602624.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|355491672|gb|AES72875.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|388519551|gb|AFK47837.1| unknown [Medicago truncatula]
Length = 207
Score = 364 bits (934), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 171/206 (83%), Positives = 194/206 (94%), Gaps = 1/206 (0%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S++ QEFDY+FKLL+IGDSGVGKS+LLL FTSD+FE LSPTIGVDFK+K+ + GKK+KL
Sbjct: 3 SSTPQEFDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGKKLKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRRDTFTNL+++WAKE+DLYSTNQDCIK+
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKM 122
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKES+RVV+KKEGIDFAREYGCLF+ECSAKTRVNV+ CFEELVLKILDTPSLL+
Sbjct: 123 LVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTPSLLA 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
EGS G KKNIFK+ PQ+DAST+GCC
Sbjct: 183 EGSKGNKKNIFKDK-PQSDASTSGCC 207
>gi|217075322|gb|ACJ86021.1| unknown [Medicago truncatula]
Length = 207
Score = 362 bits (928), Expect = 7e-98, Method: Compositional matrix adjust.
Identities = 170/206 (82%), Positives = 193/206 (93%), Gaps = 1/206 (0%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S++ QEFDY+FKLL+IGDSGVGKS+LLL FTSD+FE LSPTIGVDFK+K+ + GKK+KL
Sbjct: 3 SSTPQEFDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGKKLKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRRDTFTNL+++WAKE+DLYSTNQDCIK+
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQDCIKM 122
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKES+RVV+KKEGIDFAREYGCLF+ECSAKTRVNV+ CFEELVLKILDTPSLL+
Sbjct: 123 LVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTPSLLA 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
E S G KKNIFK+ PQ+DAST+GCC
Sbjct: 183 ESSKGNKKNIFKDK-PQSDASTSGCC 207
>gi|147809843|emb|CAN76031.1| hypothetical protein VITISV_027716 [Vitis vinifera]
Length = 197
Score = 360 bits (925), Expect = 2e-97, Method: Compositional matrix adjust.
Identities = 174/207 (84%), Positives = 190/207 (91%), Gaps = 14/207 (6%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
SS+SQ EFDYLFKLLLIGDSGVGKSTLLLS VDFK+KHV +GGKK+K
Sbjct: 5 SSSSQPEFDYLFKLLLIGDSGVGKSTLLLS--------------VDFKVKHVNIGGKKLK 50
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
LAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK
Sbjct: 51 LAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIK 110
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNKVDKESERVV+KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPSLL
Sbjct: 111 MLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPSLL 170
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+EGSSGV+KNIFK+ PP++DAST+GCC
Sbjct: 171 AEGSSGVRKNIFKQKPPESDASTSGCC 197
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 358 bits (919), Expect = 8e-97, Method: Compositional matrix adjust.
Identities = 171/205 (83%), Positives = 193/205 (94%), Gaps = 2/205 (0%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q EFDYLFKLLLIGDSGVGKS+LLL FT+D+F++LSPTIGVDFK+K V++GGKK+KLAIW
Sbjct: 11 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLSPTIGVDFKVKMVSIGGKKLKLAIW 70
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLTSSYYRGAQGIIMVYDV+RR+TFTNL+DIWAKEIDLYSTNQDC+K+LVG
Sbjct: 71 DTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDLYSTNQDCVKMLVG 130
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILDTPSLL++ S
Sbjct: 131 NKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADAS 190
Query: 187 S-GV-KKNIFKESPPQNDASTTGCC 209
S GV KKNIFK+ P+ DA+T CC
Sbjct: 191 SAGVSKKNIFKQKAPEADAATGSCC 215
>gi|218195901|gb|EEC78328.1| hypothetical protein OsI_18064 [Oryza sativa Indica Group]
Length = 213
Score = 357 bits (916), Expect = 2e-96, Method: Compositional matrix adjust.
Identities = 170/206 (82%), Positives = 188/206 (91%), Gaps = 4/206 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
+ SQ +FDYLFKLLLIGDSGVGKS+LLL FTSD FE+LSPTIGVDFK+K V GGKK+KL
Sbjct: 12 AQSQPDFDYLFKLLLIGDSGVGKSSLLLRFTSDAFEDLSPTIGVDFKVKMVNTGGKKLKL 71
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQ VYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+
Sbjct: 72 AIWDTAGQERFRTLTSSYYRGAQ----VYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 127
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVLKILDTPSLL+
Sbjct: 128 LVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLA 187
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
+ SSG KKNIFK+ PP+ DA+ + CC
Sbjct: 188 DASSGAKKNIFKQKPPEADAAASSCC 213
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 352 bits (902), Expect = 7e-95, Method: Compositional matrix adjust.
Identities = 174/221 (78%), Positives = 191/221 (86%), Gaps = 21/221 (9%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q EFDYLFK+LLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+K++ +G KK
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 MKLAIWDT---------------------AGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 99
+KLAIWDT AGQERFRTLTSSYYRGAQGIIMVYDVTRRDT
Sbjct: 61 LKLAIWDTVSHCCLSSNVTGEEEESWICNAGQERFRTLTSSYYRGAQGIIMVYDVTRRDT 120
Query: 100 FTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAK 159
FTNL+DIWAKEIDLYSTNQDCIK+LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAK
Sbjct: 121 FTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAK 180
Query: 160 TRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNIFKESPPQ 200
TRVNVEQCFEELVLKIL+TPSL +EGSSG KKNIFK++P Q
Sbjct: 181 TRVNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNPAQ 221
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 350 bits (899), Expect = 1e-94, Method: Compositional matrix adjust.
Identities = 166/206 (80%), Positives = 191/206 (92%), Gaps = 1/206 (0%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S+S QEF+YLFKLL+IGDSGVGKS+LLL FTSD+FE+LSPTIGVDFK+K++ + GKK+KL
Sbjct: 3 SSSTQEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRR+TFTNL++IWAKEIDLYSTN +CIK+
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECIKM 122
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKE +RVV+KKEG+DFARE GCLF+ECSAKTRVNV+QCFEELVLKILDTPSLL+
Sbjct: 123 LVGNKVDKEGDRVVTKKEGVDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTPSLLA 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
EGS G KKNIFK+ P Q +A T+ CC
Sbjct: 183 EGSKGNKKNIFKDKPSQTNA-TSSCC 207
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 166/206 (80%), Positives = 190/206 (92%), Gaps = 1/206 (0%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S+ QEF+YLFKLL+IGDSGVGKS+LLL FTSD+FE+LSPTIGVDFK+K++ + GKK+KL
Sbjct: 3 SSPTQEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
AIWDTAGQERFRTLTSSYYRGAQGIIM YDVTRR+TFTNL++IWAKEIDLYSTN +C+K+
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECVKM 122
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVDKES+RVV+KKEGIDFARE GCLF ECSAKTR NV+QCFEELVLKILDTPSLL+
Sbjct: 123 LVGNKVDKESDRVVTKKEGIDFARECGCLFTECSAKTRANVQQCFEELVLKILDTPSLLA 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
EGS G KKNIFK+ P Q+DA T+ CC
Sbjct: 183 EGSKGNKKNIFKDKPSQSDA-TSSCC 207
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 338 bits (868), Expect = 7e-91, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 188/209 (89%), Gaps = 1/209 (0%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
MASSTSQ +FD++FKLL+IGDSGVGKS+LLL FTSD+F++LSPTIGVDFK+K + + GK+
Sbjct: 1 MASSTSQGDFDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLSPTIGVDFKLKLMTIAGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRTLTSSYYRGAQGII VYDVTRR+TFTNL+++WAKE+DLYSTNQDC
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEVDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVD+E+ERVVSKKEGI AR+ GCLFLECSAKT VNVE CFEELVLKILDTP+
Sbjct: 121 IKMLVGNKVDRETERVVSKKEGIALARQMGCLFLECSAKTHVNVENCFEELVLKILDTPN 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL + ++ +KNIFK++ NDA++ CC
Sbjct: 181 LLQDSATAARKNIFKQNQA-NDANSGSCC 208
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 178/210 (84%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q +D FK+LLIGDSGVGKS+LL+SF S + E+L+PTIGVDFKIK + +GGK+
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL D+W KEI+LYSTNQ+C
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+++LVGNKVD+ESER VS++EGI A+E C+FLECSA+TR NVEQCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
LL EGSS VK+NI K+ P + +GCCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>gi|224138818|ref|XP_002322909.1| predicted protein [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 144/206 (69%), Positives = 176/206 (85%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLA 64
+S +D FK+LLIGDSGVGKS+LL+SF S + E+L+PTIGVDFKIK + +GGK++KL
Sbjct: 3 SSSGSYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLT 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTSSYYR AQGII+VYDVTRR+TFTNL+D+W KE++L+STNQDC+K+L
Sbjct: 63 IWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQDCVKML 122
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNKVDKES R V+K EG+ A+++GCLFLECSAKTR NVEQCFEEL LKI++ PSLL E
Sbjct: 123 VGNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVPSLLEE 182
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
GS+ VK+NI K+ P + AS GCCS
Sbjct: 183 GSTAVKRNILKQKPEHHVASNGGCCS 208
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 143/201 (71%), Positives = 173/201 (86%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDS VGKS+LL+SF S + E+L+PTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII+VYDVTRR++FTNL+D+WAKE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKV 130
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D+ESERVVS++EGI A+E+GCLF ECSAKTR NVE+CFEEL LKI++ PSLL EGS+
Sbjct: 131 DRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 190
Query: 190 KKNIFKESPPQNDASTTGCCS 210
K+NI K P T GCCS
Sbjct: 191 KRNILKPKPENQPPPTGGCCS 211
>gi|302782571|ref|XP_002973059.1| rab family GTPase [Selaginella moellendorffii]
gi|302805556|ref|XP_002984529.1| rab family GTPase [Selaginella moellendorffii]
gi|300147917|gb|EFJ14579.1| rab family GTPase [Selaginella moellendorffii]
gi|300159660|gb|EFJ26280.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 174/203 (85%), Gaps = 1/203 (0%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFD+LFK+LLIGDSGVGKS+LLL FT+DTF++LSPTIGVDFK+K + L GK++KL IWD
Sbjct: 13 NEFDHLFKILLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKLKLMTLEGKRLKLTIWD 72
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRTLTSSYYRGAQG+I+VYDVTRRDTFTNL D+W KE++LYSTNQDC+KLLVGN
Sbjct: 73 TAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLQDVWLKEVELYSTNQDCVKLLVGN 132
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
KVD++SER VS+ EGI FAR+YGCLFLE SAKTR+NV+QCFEELV KIL+TPSL++E S
Sbjct: 133 KVDRDSERAVSQHEGIAFARKYGCLFLESSAKTRINVQQCFEELVRKILETPSLVAEAKS 192
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
VKKNI + G C+
Sbjct: 193 -VKKNILRPGNEPPPPENAGSCA 214
>gi|224069599|ref|XP_002326383.1| predicted protein [Populus trichocarpa]
gi|222833576|gb|EEE72053.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 142/202 (70%), Positives = 175/202 (86%), Gaps = 1/202 (0%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDSGVGKS+LL+SF S + E+++PTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 12 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTA 71
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYR AQGII+VYDVTRR+TFTNL+D+W KE+DLYSTNQDC+K+LVGNKV
Sbjct: 72 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKV 131
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
DK+SER V++ EG+ A+E+GC FLECSAKTR NVEQCFEEL LKI++ PSL+ EGS+ V
Sbjct: 132 DKDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAV 191
Query: 190 KKNIFKESPPQNDAST-TGCCS 210
K+NI K+ P Q+ S+ GCCS
Sbjct: 192 KRNILKQKPDQHPPSSGGGCCS 213
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 180/212 (84%), Gaps = 2/212 (0%)
Query: 1 MASSTSQQE-FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGK 59
M SS+ Q +D FK+LLIGDS VGKS+LL+SF S++ E+++PTIGVDFKIK + +GGK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNL+++W+KE++LYSTNQ+
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQN 120
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
C+K+LVGNKVD++SERVVSK+EG+ A E GCLF ECSAKTR NVE+CFEEL LKI++ P
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180
Query: 180 SLLSEGSSGVKKNIFKESPPQNDAST-TGCCS 210
SLL EGS+ VK+NI K+ Q AS GCCS
Sbjct: 181 SLLEEGSTAVKRNILKQQQEQPQASEFGGCCS 212
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 139/201 (69%), Positives = 172/201 (85%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDS VGKS+LL+SF S++ E+++PTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNL+ +W+KE++LYSTNQ+C+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D++SERVVSK+EG+ A E GCLF ECSAKTR NVE+CFEEL LKI++ PSLL EGS+ V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 190 KKNIFKESPPQNDASTTGCCS 210
K+NI K+ + GCCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 139/201 (69%), Positives = 171/201 (85%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDS VGKS+LL+SF S++ E ++PTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEGIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII+VYDVTRRDTFTNL+ +W+KE++LYSTNQ+C+K+LVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D++SERVVSK+EG+ A E GCLF ECSAKTR NVE+CFEEL LKI++ PSLL EGS+ V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 190 KKNIFKESPPQNDASTTGCCS 210
K+NI K+ + GCCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 136/201 (67%), Positives = 170/201 (84%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDSGVGKS+LL+SF S + E+LSPTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTL SSYYR AQGII+VYDVTRR+TFTNL+++W+KE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D+++ER VS++EG+ A+E GCL LECSAKTR NVEQCFEEL LKI++ PSLL EGS+ V
Sbjct: 131 DRDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAV 190
Query: 190 KKNIFKESPPQNDASTTGCCS 210
K+++ K + GCCS
Sbjct: 191 KRSVLKPKQESQASQNGGCCS 211
>gi|1370172|emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 301 bits (770), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 136/207 (65%), Positives = 173/207 (83%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S+S +D FK+LLIGDSGVGKS+LL+SF S + E+ SPTIGVDFKIK + +GGK++KL
Sbjct: 2 SSSSGGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGKRLKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
+WDTAGQERFRTLTSSYYRGAQGII+VYDVT+R+TFTNL+++W+KE++LYS NQDC+K+
Sbjct: 62 TLWDTAGQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQDCVKM 121
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNKVD+++ R VS++EG+ A+E GCL +ECSAKTR NVEQCFEEL LKI++ PSLL
Sbjct: 122 LVGNKVDRDAARAVSREEGLALAKELGCLLIECSAKTRENVEQCFEELALKIMEAPSLLE 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
EGS+ VK+NI K+ + GCCS
Sbjct: 182 EGSTAVKRNILKQKQEPQASQHGGCCS 208
>gi|449440149|ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like
[Cucumis sativus]
Length = 210
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 176/210 (83%), Gaps = 2/210 (0%)
Query: 1 MASSTSQQ-EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGK 59
M SS+ Q +D FK+LLIGDSGVGKS+LLLSF S + L+PTIGVDFKIK + +GGK
Sbjct: 1 MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL+D+WAKE++LYSTN+D
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
C+K+L+GNKVD+ESER VS++EGI A+ G FLECSAKTR NVE+CFE+L LKI++ P
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
SL+ EGS+ VK+NI K+ Q ASTT CC
Sbjct: 181 SLIEEGSTVVKRNILKQQEFQ-PASTTSCC 209
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 137/202 (67%), Positives = 171/202 (84%), Gaps = 1/202 (0%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDT-FEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
D FK+LLIGDSGVGKS LL++F S++ E+LSPTIGVDFKIK + +GGK++KL IWDT
Sbjct: 13 HDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDT 72
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL+++W+KE++LYSTNQ+C+K+LVGNK
Sbjct: 73 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNK 132
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
VDK+SER VS++EG+ A+E GCL LECSAKTR NVE+CFEEL LKI++ PSLL EGS+
Sbjct: 133 VDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAA 192
Query: 189 VKKNIFKESPPQNDASTTGCCS 210
K+N+ K+ + GCCS
Sbjct: 193 TKRNVLKQKQEPQSSQNGGCCS 214
>gi|255556838|ref|XP_002519452.1| protein with unknown function [Ricinus communis]
gi|223541315|gb|EEF42866.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 172/206 (83%), Gaps = 7/206 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDSGVGKS+LL+SF S + E+L+PTIGVDFKIK + + GK++KL IWDTA
Sbjct: 13 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVDGKRLKLTIWDTA 72
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYR AQGII+VYDVTRR+TFTNL+D+WAKE+DLY TN+DC+K+LVGNK+
Sbjct: 73 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWAKEVDLYCTNKDCVKMLVGNKL 132
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +SER VS++EG+ A+E+GC FLECSAKTR NVE+CFEEL LKI++ PSLL EGS+ V
Sbjct: 133 DIDSERAVSREEGMALAKEHGCAFLECSAKTRENVEKCFEELALKIMEVPSLLEEGSTAV 192
Query: 190 KKNIF-----KESPPQNDASTTGCCS 210
KK I ++PP + TGCCS
Sbjct: 193 KKKILNQKQENQAPPSR--ANTGCCS 216
>gi|168004225|ref|XP_001754812.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162693916|gb|EDQ80266.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/211 (68%), Positives = 176/211 (83%), Gaps = 7/211 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
+ S EFD+LFK+LLIGDSGVGKS+LL+ FT+DTF++LSPTIGVDFK+K + LGGKK+KL
Sbjct: 2 AASGGEFDHLFKILLIGDSGVGKSSLLVRFTADTFDDLSPTIGVDFKVKMMTLGGKKLKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRTLTSSYYRGAQGII+VYDV+RR TFTNL+DIW KE+D YSTN DCIK+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTNLSDIWLKEVDRYSTNPDCIKM 121
Query: 124 LVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
L+GNKVD +E ERVV+KKEGI FAR++GCLFLE SAKT VNV++CF+ELV KILDTPSL
Sbjct: 122 LIGNKVDLEEHERVVTKKEGIAFARQHGCLFLEASAKTSVNVQRCFDELVQKILDTPSLT 181
Query: 183 SEGSSGVKKNIFKES-----PPQNDASTTGC 208
++ ++ +KKN+ + P + GC
Sbjct: 182 AD-TAQLKKNVLRPGETADLPAPDAGGACGC 211
>gi|413920113|gb|AFW60045.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 157
Score = 291 bits (746), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 133/156 (85%), Positives = 148/156 (94%)
Query: 54 VALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDL 113
V +GGKK+KLAIWDTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDL
Sbjct: 2 VTIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDL 61
Query: 114 YSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173
YSTNQDCIK+LVGNKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVL
Sbjct: 62 YSTNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVL 121
Query: 174 KILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
KILDTPSLL++ SSG KKNIFK+ PP+ DA+ + CC
Sbjct: 122 KILDTPSLLADASSGAKKNIFKQKPPEADAAASSCC 157
>gi|168019492|ref|XP_001762278.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162686356|gb|EDQ72745.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 175/209 (83%), Gaps = 4/209 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
+ S EFD+LFK+LLIGDSGVGKS+LLL FT+DTF++LSPTIGVDFK+K + LGGK++KL
Sbjct: 2 AASGGEFDHLFKVLLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKVKMMTLGGKRLKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRTLTSSYYRGAQGII+VYDV+RR TFT+L+DIW KE+D +ST DCIK+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTDLSDIWLKEVDRFSTKPDCIKM 121
Query: 124 LVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
L+GNKVD +E ERVV+KKEGI FAR++GCLFLE SAKT +NV++CF+ELV KILDTPSL+
Sbjct: 122 LIGNKVDLEERERVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVQKILDTPSLI 181
Query: 183 SEGSSGVKKNIFK--ESPPQNDASTTGCC 209
+ + +KKN+ + E+ + G C
Sbjct: 182 -DNVAQLKKNVLRPGETADLPSPAAGGAC 209
>gi|115450707|ref|NP_001048954.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|15451614|gb|AAK98738.1|AC090485_17 Putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108706165|gb|ABF93960.1| Ras family protein, expressed [Oryza sativa Japonica Group]
gi|113547425|dbj|BAF10868.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|125542397|gb|EAY88536.1| hypothetical protein OsI_10009 [Oryza sativa Indica Group]
gi|125584909|gb|EAZ25573.1| hypothetical protein OsJ_09398 [Oryza sativa Japonica Group]
gi|215692396|dbj|BAG87816.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 174/211 (82%), Gaps = 4/211 (1%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGG 58
MASS + +D FK+LLIGDS VGKS+LL+SF S + +E++PTIGVDFKIK + + G
Sbjct: 1 MASSPASS-YDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNG 59
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFR +TSSYYRGA GII+VYDVT+R++FTNLAD+WAKEI+L+STN+
Sbjct: 60 KKLKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNK 119
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+CIK+LVGNKVDK ER+V+++EG+ FA+E GCLFLE SAKTR NVE+CFEEL LKIL+
Sbjct: 120 ECIKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELALKILEV 179
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PSLL EGSS VK+N K+ +N A GCC
Sbjct: 180 PSLLEEGSSVVKRNSLKQ-KHENKAKNGGCC 209
>gi|226502426|ref|NP_001150036.1| ras-related protein Rab-18 [Zea mays]
gi|226958554|ref|NP_001152900.1| uncharacterized protein LOC100272640 [Zea mays]
gi|194700036|gb|ACF84102.1| unknown [Zea mays]
gi|195636232|gb|ACG37584.1| ras-related protein Rab-18 [Zea mays]
gi|413934110|gb|AFW68661.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 169/199 (84%), Gaps = 3/199 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
FK LLIGDSGVGKS+LL+SF + ++ +++PTIGVDFKIK + +GGKK+KL IWDTAGQ
Sbjct: 16 FKFLLIGDSGVGKSSLLVSFVAASYLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NLAD+W KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG-VK 190
+ ER+V+K+EG+ FA EYGCLFLE SAKTR NVE+CFEEL LKIL+ PSLL EGSS VK
Sbjct: 136 DDERMVTKEEGLAFAEEYGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 191 KNIFKESPPQNDASTTGCC 209
+NI K+ + + +GCC
Sbjct: 196 RNILKQKQESDAKNGSGCC 214
>gi|357114065|ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 212
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSF--TSDTFEELSPTIGVDFKIKHVALGG 58
M +S +D FK+LLIGDS VGKS+LL+SF S T ++SPTIGVDFKIK + +G
Sbjct: 1 MGTSPGTSSYDCSFKILLIGDSAVGKSSLLVSFVSASPTDHDISPTIGVDFKIKFLTVGE 60
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R +FTNLAD+WAKEI+L+STN+
Sbjct: 61 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNK 120
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+C+K+LVGNKVDK+ ER+V+++EG+ FA+E GCLFLE SAKTR NVE+CFEEL LKIL+
Sbjct: 121 ECVKMLVGNKVDKDEERMVTREEGLAFAQECGCLFLESSAKTRENVEKCFEELALKILEV 180
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PSL EGSS VK+N K+ N GCC
Sbjct: 181 PSLSEEGSSVVKRNSLKQKQENNAKHGGGCC 211
>gi|116786676|gb|ABK24198.1| unknown [Picea sitchensis]
Length = 222
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 143/209 (68%), Positives = 173/209 (82%), Gaps = 4/209 (1%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
SS SQ +FDY FKLLL GDSGVGKS+LLL FTSD+F++ TIGVDFK K + +G K++K
Sbjct: 15 SSRSQGDFDYSFKLLLAGDSGVGKSSLLLRFTSDSFDDAIATIGVDFKQKLMTVGDKRLK 74
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQE+FRTLT+SYYRGA G I VYDVTRR+TFTNL ++W +E +YSTNQDCIK
Sbjct: 75 LTIWDTAGQEKFRTLTNSYYRGAHGFIFVYDVTRRETFTNLKNVWLEEALIYSTNQDCIK 134
Query: 123 LLVGNKVDK--ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
++VGNKVD+ +SE VVSK+EGI+FA+++GCLF+ECSAKTR+NVEQCFEEL+LKILDTPS
Sbjct: 135 MVVGNKVDRAMDSESVVSKEEGIEFAKQHGCLFIECSAKTRLNVEQCFEELLLKILDTPS 194
Query: 181 LLSEGSSGVKK-NIFKESPPQNDASTTGC 208
LL EGSS V+K NIF P A+ C
Sbjct: 195 LL-EGSSSVEKNNIFDYEQPTLGANDPCC 222
>gi|242034275|ref|XP_002464532.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
gi|241918386|gb|EER91530.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
Length = 217
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/199 (68%), Positives = 169/199 (84%), Gaps = 3/199 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSF--TSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
FK+LLIGDSGVGKS+LL+SF S+ +++PTIGVDFKIK + +GGKK+KL IWDTAGQ
Sbjct: 18 FKILLIGDSGVGKSSLLVSFVAASNLDADIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 77
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NL+D+W KEI+ STN+DCIK+LVGNKVDK
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLSDVWTKEIEANSTNKDCIKMLVGNKVDK 137
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG-VK 190
+ ER+V+K+EG+ FA E GCLFLE SAKTR NVEQCFEEL LKIL+ PSLL EGSS VK
Sbjct: 138 DDERMVTKEEGLAFAEESGCLFLESSAKTRENVEQCFEELALKILEVPSLLEEGSSSVVK 197
Query: 191 KNIFKESPPQNDASTTGCC 209
+NI K+ + +++GCC
Sbjct: 198 RNILKQKQESHAKNSSGCC 216
>gi|226529379|ref|NP_001150695.1| ras-related protein Rab-18 [Zea mays]
gi|195641120|gb|ACG40028.1| ras-related protein Rab-18 [Zea mays]
Length = 212
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/211 (64%), Positives = 175/211 (82%), Gaps = 3/211 (1%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGG 58
MASS + +D FK+LLIGDS VGKS+LL+SF S ++++PTIGVDFKIK +++GG
Sbjct: 1 MASSPASS-YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVGG 59
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNLAD+W KEI+L+STN+
Sbjct: 60 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNK 119
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+CIK+LVGNKVDK+ +R+V+K+EG++FA+E GCLF+E SAKTR NVE+CFEEL LKIL
Sbjct: 120 ECIKMLVGNKVDKDEDRMVTKEEGLEFAQERGCLFVESSAKTRENVEKCFEELALKILQV 179
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PSLL EGSS VK+N Q +A+ +G C
Sbjct: 180 PSLLEEGSSVVKRNTLTLKQKQENANRSGGC 210
>gi|223947433|gb|ACN27800.1| unknown [Zea mays]
gi|413957007|gb|AFW89656.1| hypothetical protein ZEAMMB73_805451 [Zea mays]
Length = 309
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 173/211 (81%), Gaps = 3/211 (1%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGG 58
MASS + +D FK+LLIGDS VGKS+LL+SF S ++++PTIGVDFKI +++GG
Sbjct: 98 MASSPASS-YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKINFLSVGG 156
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNLAD+W KEI+L+STN+
Sbjct: 157 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNK 216
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+CIK+LVGNKVDK+ +R+V+K+EG+ FA+E GCLF+E SAKTR NVE+CFEEL LKIL
Sbjct: 217 ECIKMLVGNKVDKDEDRMVTKEEGLAFAQERGCLFVESSAKTRENVEKCFEELALKILQV 276
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PSLL EGSS VK+N Q +A+ +G C
Sbjct: 277 PSLLEEGSSVVKRNTLTLKQKQENANRSGGC 307
>gi|242042233|ref|XP_002468511.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
gi|241922365|gb|EER95509.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
Length = 210
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 176/211 (83%), Gaps = 4/211 (1%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGG 58
MASS + +D FK+LLIGDS VGKS+LL+SF S ++++PTIGVDFKIK +++GG
Sbjct: 1 MASSPASS-YDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVGG 59
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R++FTNLA++W KEI+L+STN+
Sbjct: 60 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLAEVWTKEIELHSTNK 119
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+C+K+LVGNKVDK+ +R+V+K+EG+ FA+E GCLF+E SAKTR NVE+CFEEL LKIL+
Sbjct: 120 ECVKMLVGNKVDKDEDRMVTKEEGLAFAQECGCLFVESSAKTRENVEKCFEELALKILEV 179
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PSLL EGSS VK+N K+ +N + GCC
Sbjct: 180 PSLLEEGSSVVKRNTLKQ-KQENSNQSGGCC 209
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 141/213 (66%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 1 MASSTSQ---QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALG 57
MA S S+ +DY FK+LLIGDSGVGKS+LLLSF S++ +LSPTIGVDFKIK + LG
Sbjct: 1 MAGSFSKGWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRDLSPTIGVDFKIKVLTLG 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TF NL+DIWA+E++LY TN
Sbjct: 61 GKRLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFENLSDIWAEEVELY-TN 119
Query: 118 QDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
Q CIK+LVGNKVD++SERVVS++EG+ A+E+ C FLECSAKTR NV QCF+EL LKI +
Sbjct: 120 QKCIKILVGNKVDRDSERVVSREEGMALAQEHKCSFLECSAKTRENVLQCFKELTLKISE 179
Query: 178 TPSLLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
PSLL GS V++ I KE GCCS
Sbjct: 180 VPSLLENGSVVVRQQILKEKQVYQAPRGGGCCS 212
>gi|168025036|ref|XP_001765041.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162683850|gb|EDQ70257.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 208
Score = 282 bits (722), Expect = 5e-74, Method: Compositional matrix adjust.
Identities = 133/195 (68%), Positives = 169/195 (86%), Gaps = 2/195 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAI 65
S+ EFD+LFK+LLIGDSGVGKS+LLL FT+D F++LSPTIGVDFK++ + LG K++KL I
Sbjct: 4 SRGEFDHLFKVLLIGDSGVGKSSLLLRFTADKFDDLSPTIGVDFKVEMMILGTKRLKLTI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLTSSYYRGA GII+VYDV+RR TFT+ +D+W KE++ +STN+DCIK+LV
Sbjct: 64 WDTAGQERFRTLTSSYYRGAHGIILVYDVSRRTTFTDFSDVWLKEVEWFSTNKDCIKVLV 123
Query: 126 GNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
GNKVD +E ERVV+KKEG+ FAR++GCLFLE SAKT VNV++CF+ELV KILDTPS L
Sbjct: 124 GNKVDLEERERVVAKKEGVAFARQHGCLFLEASAKTCVNVQRCFDELVQKILDTPS-LHA 182
Query: 185 GSSGVKKNIFKESPP 199
++ ++KN+ + PP
Sbjct: 183 NTAQLRKNVIYKCPP 197
>gi|226506700|ref|NP_001152280.1| ras-related protein Rab-18 [Zea mays]
gi|195654619|gb|ACG46777.1| ras-related protein Rab-18 [Zea mays]
gi|414871235|tpg|DAA49792.1| TPA: ras protein Rab-18 [Zea mays]
Length = 215
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/199 (67%), Positives = 168/199 (84%), Gaps = 3/199 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
FK+LLIGDSGVGKS+LL+SF + + +++PTIGVDFKIK + +GGKK+KL IWDTAGQ
Sbjct: 16 FKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NLAD+W KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG-VK 190
+ ER+V+++EG+ FA E GCLFLE SAKTR NVE+CFEEL LKIL+ PSLL EGSS VK
Sbjct: 136 DDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 191 KNIFKESPPQNDASTTGCC 209
+NI K+ + + +GCC
Sbjct: 196 RNILKQKQESHAKNGSGCC 214
>gi|449441211|ref|XP_004138376.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449503760|ref|XP_004162163.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 208
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 129/197 (65%), Positives = 160/197 (81%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQER 73
FK+LLIGDS VGKS+LL +F S + +LSPTIGVDFKIK + + GK++KL IWDTAGQER
Sbjct: 12 FKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGKRLKLTIWDTAGQER 71
Query: 74 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKES 133
FR+LTSSYYRGAQGII+VYDVTRR+TF NL D+WA E++LY T+QDC+K+LVGNKVD+ES
Sbjct: 72 FRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQDCVKMLVGNKVDRES 131
Query: 134 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNI 193
ERVVS+++GI A + G LF ECSAKTR NVE+CFEEL +KI++ PS L E SS VK+NI
Sbjct: 132 ERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVPSFLEERSSLVKRNI 191
Query: 194 FKESPPQNDASTTGCCS 210
++ + GCCS
Sbjct: 192 LRQKQEGQAQQSGGCCS 208
>gi|168006773|ref|XP_001756083.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692593|gb|EDQ78949.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 280 bits (715), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 134/206 (65%), Positives = 174/206 (84%), Gaps = 4/206 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+FD+LFK+LL+G+SGVGKS+LLL FT+ F++LSPTIGVDFK+K V+L GK++KL IWD
Sbjct: 6 NDFDHLFKILLVGNSGVGKSSLLLRFTASKFDDLSPTIGVDFKVKMVSLQGKRLKLTIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRTLTS+YYRGAQGII+VYDVTRR TFT+L+D+W KE+D +STN+DCIK+L+GN
Sbjct: 66 TAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRFSTNKDCIKMLIGN 125
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
KVD +ESERVV+KKEGI FAR++GCLFLE SAKT +NV++CF+ELV KILDTPSL ++ +
Sbjct: 126 KVDLEESERVVAKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKILDTPSLTAD-T 184
Query: 187 SGVKKNIFKESP--PQNDASTTGCCS 210
+ ++ N+ + Q + G CS
Sbjct: 185 AQLETNLLRSDQMWDQGYLALGGVCS 210
>gi|356576370|ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 136/210 (64%), Positives = 162/210 (77%), Gaps = 4/210 (1%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSF--TSDTFEELSPTIGVDFKIKHVALGGKK 60
S +DY FK+LL+GDSGVGKS+LLLSF S++ LSPTIGVDFKIK +GGK+
Sbjct: 5 SRVGSSNYDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFTVGGKR 64
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERF T+ SYYRGA GII+VYDVTRR+TFTNL DIWAKE++LYSTN D
Sbjct: 65 LKLTIWDTAGQERFGTVIGSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVELYSTNHDS 124
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESER VSK+EG+ A+++ CLFLECSAKTR NV+QCF +L LKILD PS
Sbjct: 125 IKILVGNKVDKESERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVPS 184
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
L GS VK+ K+ + + GCCS
Sbjct: 185 LRERGSVAVKRQ--KQKHIYETSKSGGCCS 212
>gi|115482326|ref|NP_001064756.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|31432458|gb|AAP54088.1| Ras-related protein Rab-18, putative, expressed [Oryza sativa
Japonica Group]
gi|113639365|dbj|BAF26670.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|125532213|gb|EAY78778.1| hypothetical protein OsI_33880 [Oryza sativa Indica Group]
gi|125575025|gb|EAZ16309.1| hypothetical protein OsJ_31770 [Oryza sativa Japonica Group]
gi|215736815|dbj|BAG95744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 222
Score = 278 bits (711), Expect = 9e-73, Method: Compositional matrix adjust.
Identities = 133/202 (65%), Positives = 165/202 (81%), Gaps = 6/202 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF-----EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
FK+LLIGDSGVGKS+LL+SF ++++PTIGVDFKIK + +GGKK+KL IWDT
Sbjct: 20 FKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLTIWDT 79
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGAQGII+VYDVT+R++FTNLA++W+KEI+ +S+N+DCIK+LVGNK
Sbjct: 80 AGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKMLVGNK 139
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+DKE ER V+++EG+ FA E GCLFLE SAKTR NVE+CFEEL LKI+D PSLL EGSS
Sbjct: 140 IDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPSLLEEGSSS 199
Query: 189 -VKKNIFKESPPQNDASTTGCC 209
VK+NI K+ GCC
Sbjct: 200 VVKRNILKQKQESQAKHGGGCC 221
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 127/181 (70%), Positives = 158/181 (87%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDSGVGKS+LL+SF S + E+LSPTIGVDFKIK + +GGK++KL IWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTL SSYYR AQGII+VYDVTRR+TFTNL+++W+KE++LYSTNQDC+K+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D+++ER VS++EG+ A++ GCL LECSAKTR NVEQCFEEL LKI++ PSLL E +
Sbjct: 131 DRDTERAVSREEGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEDQQQL 190
Query: 190 K 190
K
Sbjct: 191 K 191
>gi|195628816|gb|ACG36230.1| ras-related protein Rab-18 [Zea mays]
Length = 215
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 133/199 (66%), Positives = 167/199 (83%), Gaps = 3/199 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
FK+LLIGDSGVGKS+LL+SF + + +++PTIGVDFKIK + +GGKK+KL IWDTAGQ
Sbjct: 16 FKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 75
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDVT+R++F+NLAD+W KEI+ STN+DCIK+LVGNKVDK
Sbjct: 76 ERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGNKVDK 135
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG-VK 190
+ ER+V+++EG+ FA E GCLFLE SAKTR NVE+CFEEL LKIL+ PSLL EGSS VK
Sbjct: 136 DDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSSSVVK 195
Query: 191 KNIFKESPPQNDASTTGCC 209
+ I K+ + + +GCC
Sbjct: 196 RKILKQKQESHAKNGSGCC 214
>gi|356535505|ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glycine max]
gi|255629553|gb|ACU15124.1| unknown [Glycine max]
Length = 212
Score = 276 bits (706), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSF--TSDTFEELSPTIGVDFKIKHVALGGK 59
AS +DY FK+LLIGDSGVGKS+LLLSF S++ +LSPTIGVDFKIK +GGK
Sbjct: 4 ASRVESSNYDYSFKVLLIGDSGVGKSSLLLSFISNSNSINDLSPTIGVDFKIKLFTVGGK 63
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERF T+ SSYYRGA GII+VYDVTRR+TFTNL DIWAKE++ YSTN
Sbjct: 64 RLKLTIWDTAGQERFGTVISSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVERYSTNHG 123
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
IK+LVGNKVDK+SER VSK+EG+ A+++ CLFLECSAKTR NV+QCF +L LKILD P
Sbjct: 124 SIKILVGNKVDKDSERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKILDVP 183
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
L +GS VK+ K+ + + GCCS
Sbjct: 184 GLREKGSVAVKRQ--KQKHIYETSQSAGCCS 212
>gi|326515390|dbj|BAK03608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 275 bits (703), Expect = 9e-72, Method: Compositional matrix adjust.
Identities = 135/208 (64%), Positives = 169/208 (81%), Gaps = 6/208 (2%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTS--DTFEELSPTIGVDFKIKHVALGGKKM 61
ST +D FK+LLIGDS VGKS+LL+SF S T +++SPTIGVDFKIK + +G KK+
Sbjct: 3 STPGSSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVGDKKL 62
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT+R +FTNLAD+WAKEI+L+STN++C+
Sbjct: 63 KLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTNKECV 122
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
K+LVGNK+DK+ +R+V+ +EG+ FA++ GCLFLE SAKTR NVE+CFEELVLKIL+ PSL
Sbjct: 123 KMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESSAKTRENVEKCFEELVLKILEVPSL 182
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCC 209
EGSS VK+N K Q + GCC
Sbjct: 183 SEEGSSVVKRNSLK----QKHEKSGGCC 206
>gi|168018849|ref|XP_001761958.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162687013|gb|EDQ73399.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 133/205 (64%), Positives = 168/205 (81%), Gaps = 3/205 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+FD LFK+LLIG+SGVGKS+LLL FT+ F++LSPTIGVDFK+K + L GK++KL IWDT
Sbjct: 8 DFDNLFKILLIGNSGVGKSSLLLRFTAGKFDDLSPTIGVDFKVKMLNLQGKRLKLTIWDT 67
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGII+VYDVTRR TFT+L+D+W KE+D YSTN+DCI +LVG+K
Sbjct: 68 AGQERFRTLTSSYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRYSTNKDCIMMLVGSK 127
Query: 129 VD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
VD +ES RVV+KKEGI FAR++GCLFLE SAKT +NV++CF+ELV KI+DTPSL ++
Sbjct: 128 VDLEESGRVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKIIDTPSLTADTGK 187
Query: 188 GVKKNIFKESPPQNDASTT--GCCS 210
N+ + + ++T G CS
Sbjct: 188 LKPTNLLRPDKASDQGTSTPGGICS 212
>gi|15232785|ref|NP_187602.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185198|ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185200|ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|75204354|sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC2b; Short=AtRABC2b; AltName:
Full=Ras-related protein Rab18C; Short=AtRab18C
gi|6681328|gb|AAF23245.1|AC015985_3 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|45773784|gb|AAS76696.1| At3g09910 [Arabidopsis thaliana]
gi|46359845|gb|AAS88786.1| At3g09910 [Arabidopsis thaliana]
gi|332641308|gb|AEE74829.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641309|gb|AEE74830.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641310|gb|AEE74831.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
Length = 205
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 169/211 (80%), Gaps = 6/211 (2%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q +D FK+LLIGDSGVGKS+LLLSF S + E+L+PTIGVDFKIK + + GK+
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NLADIWAKEI+LYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVD+ESER VS++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
LL EGSS VK+ P A CCSS
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCCSS 205
>gi|359486861|ref|XP_002265762.2| PREDICTED: ras-related protein RABC2a-like [Vitis vinifera]
Length = 215
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 165/207 (79%), Gaps = 9/207 (4%)
Query: 1 MASST---SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALG 57
M SS+ + +D FK+LLIGDSGVGKS+LLLSF S + +LSPTIGVDFKI + +G
Sbjct: 4 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 63
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERF TLT+SYYRGA GII+VYDVTRR++FTNL D+WAKE++LYSTN
Sbjct: 64 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 123
Query: 118 QDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+CIK LVGNKVD++ ER V+++EG+ A+E+ C FLECSAKTR NV+QCF+EL LKIL
Sbjct: 124 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 183
Query: 178 TPSLLSEGSSGV------KKNIFKESP 198
PSLL +GS V +K +++ESP
Sbjct: 184 VPSLLEQGSRVVERQTLMQKELYQESP 210
>gi|296085951|emb|CBI31392.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 271 bits (694), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 165/207 (79%), Gaps = 9/207 (4%)
Query: 1 MASST---SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALG 57
M SS+ + +D FK+LLIGDSGVGKS+LLLSF S + +LSPTIGVDFKI + +G
Sbjct: 1 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERF TLT+SYYRGA GII+VYDVTRR++FTNL D+WAKE++LYSTN
Sbjct: 61 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 120
Query: 118 QDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+CIK LVGNKVD++ ER V+++EG+ A+E+ C FLECSAKTR NV+QCF+EL LKIL
Sbjct: 121 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 180
Query: 178 TPSLLSEGSSGV------KKNIFKESP 198
PSLL +GS V +K +++ESP
Sbjct: 181 VPSLLEQGSRVVERQTLMQKELYQESP 207
>gi|297833756|ref|XP_002884760.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
gi|297330600|gb|EFH61019.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 138/211 (65%), Positives = 169/211 (80%), Gaps = 6/211 (2%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q +D FK+LLIGDSGVGKS+LLLSF S + E+L+PTIGVDFKIK + + GK+
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NLAD+WAKEI+LYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFMNLADVWAKEIELYSTNHDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVD+ESER VS++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSQEEGMALAKDLKCLFHECSARTRDNVNWCFEELALKIMEVPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
LL EGSS VK+ P + CCSS
Sbjct: 181 LLEEGSSSVKRK------PDYRSHQGRCCSS 205
>gi|217069806|gb|ACJ83263.1| unknown [Medicago truncatula]
gi|388498948|gb|AFK37540.1| unknown [Medicago truncatula]
Length = 212
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 133/211 (63%), Positives = 163/211 (77%), Gaps = 4/211 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSD--TFEELSPTIGVDFKIKHVALGGK 59
+S +DY FK+LLIGDSGVGKS+LLLSF S+ + ++LSPTIGVDFKIK +G K
Sbjct: 4 SSKVGNSNYDYSFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTIGDK 63
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERF T+ SYYRGA GI++VYDVTRR+TFTNL WAKE+ LYSTN D
Sbjct: 64 RLKLTIWDTAGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYSTNHD 123
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
CIK+LVGNKVDKESER VSK+EG+ A+E+ CLFLECSAKT+ NV+QCF++L LKIL+ P
Sbjct: 124 CIKILVGNKVDKESERAVSKEEGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKILEVP 183
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
SL +GS VK+ K+ + GCCS
Sbjct: 184 SLREKGSVEVKRQ--KQKRFYETSQRGGCCS 212
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 270 bits (689), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 130/205 (63%), Positives = 169/205 (82%), Gaps = 4/205 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+FD L K+ ++G+SGVGKS+LLL F + F+EL PTIGVDFK+K + L GK++KL IWDT
Sbjct: 7 DFDILLKIPVVGNSGVGKSSLLLRFAAGKFDELWPTIGVDFKVKMMNLQGKRLKLTIWDT 66
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTS+YYRGAQGII+VYDVTRR TFT+L ++W KE++ +STN+DCIK+L+GNK
Sbjct: 67 AGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIKMLIGNK 126
Query: 129 VD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
VD +ESER+V+KKE I FA+++GCLFLE SAKT +NV++CF ELVLKILDTP+L ++ S
Sbjct: 127 VDLEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILDTPNLTAD-SV 185
Query: 188 GVKKNIFKESPPQNDASTT--GCCS 210
+K N+FK +P + S T G CS
Sbjct: 186 QLKPNLFKPNPKWDRGSLTPGGVCS 210
>gi|357146466|ref|XP_003574002.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 217
Score = 269 bits (687), Expect = 6e-70, Method: Compositional matrix adjust.
Identities = 131/199 (65%), Positives = 161/199 (80%), Gaps = 3/199 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
FK+LLIGDSGVGKS+LL+SF + ++++PTIGVDFKIK + +GGKK+KL IWDTAGQ
Sbjct: 18 FKILLIGDSGVGKSSLLVSFVAAATLDDDITPTIGVDFKIKFLTVGGKKLKLTIWDTAGQ 77
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+T SYYRGAQGII+VYDV +R++FTNLAD+W KEID S+N+DCIK+LVGNKVDK
Sbjct: 78 ERFRTITGSYYRGAQGIILVYDVAKRESFTNLADVWTKEIDSNSSNKDCIKMLVGNKVDK 137
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-SSGVK 190
+ ER V+++EG+ FA E GCLFLE SAKTR NVE CFE+L LKIL+ PSLL EG SS VK
Sbjct: 138 DDERTVTREEGLAFAEESGCLFLESSAKTRENVENCFEQLTLKILEVPSLLEEGCSSVVK 197
Query: 191 KNIFKESPPQNDASTTGCC 209
+NI K+ + CC
Sbjct: 198 RNILKQQQESHAKYGGRCC 216
>gi|449465314|ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 269 bits (687), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 128/213 (60%), Positives = 169/213 (79%), Gaps = 4/213 (1%)
Query: 1 MASSTSQQ--EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGG 58
M SS+ + +DY FK+LLIGDSGVGKS++LLS+ S+ +LSPTIGVDFKIK V +GG
Sbjct: 2 MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERF TLTSSYYRGA GII+VYDVTRR+TFTNL ++WAKE++LY TN+
Sbjct: 62 KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
+CIK+LVGNKVD+ S+R V+ +EG++ A+++ LFLECSA+TR NV++CF+EL K+++
Sbjct: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTT--GCC 209
PSLL GS VK+ I ++ + + GCC
Sbjct: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214
>gi|255584090|ref|XP_002532788.1| protein with unknown function [Ricinus communis]
gi|223527476|gb|EEF29607.1| protein with unknown function [Ricinus communis]
Length = 251
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 135/248 (54%), Positives = 166/248 (66%), Gaps = 47/248 (18%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+DY FK+LLIGDSGVGKS++LLSF S++ +LSPTIGVDFKIK ++ GGK++KL IWDTA
Sbjct: 4 YDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLSAGGKRLKLTIWDTA 63
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERF TL SSYYRGA GII+VYDVTRR+TFTNL+D WAKE++LYSTN++CIK+LVGNKV
Sbjct: 64 GQERFGTLISSYYRGAHGIILVYDVTRRETFTNLSDTWAKEVELYSTNKECIKVLVGNKV 123
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLK--------------- 174
D++SER VSK+EG+ A E+ C FLECSAKTR NV QCF+EL LK
Sbjct: 124 DRDSERAVSKEEGMALAEEHKCSFLECSAKTRENVLQCFKELSLKISNIVPFYEYVYCRY 183
Query: 175 --------------------------------ILDTPSLLSEGSSGVKKNIFKESPPQND 202
IL+ PSLL GS+ VK+++ K+
Sbjct: 184 VNHTLHAILPYYQRGNFKENFELPEAALILEQILEVPSLLENGSAAVKQHVLKQKQEYKA 243
Query: 203 ASTTGCCS 210
GCCS
Sbjct: 244 LHGGGCCS 251
>gi|224097728|ref|XP_002311057.1| predicted protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 137/217 (63%), Positives = 167/217 (76%), Gaps = 10/217 (4%)
Query: 1 MASSTSQ---QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALG 57
MA S S+ +DY FK+LLIGDSGVGKS+LLLSF S + +LSPTIGVDFK+K + +G
Sbjct: 1 MAGSFSKGGNNSYDYSFKILLIGDSGVGKSSLLLSFISSSVRDLSPTIGVDFKVKMLTVG 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERF TL SSYYRGA GII+VYDVTRR+TF NL+DIWAKE++LYSTN
Sbjct: 61 GKRLKLTIWDTAGQERFGTLISSYYRGAHGIILVYDVTRRETFENLSDIWAKEVELYSTN 120
Query: 118 QDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
D IK+LVGNKVD++SER VS++EG+ A+++ C F ECSAKT NV QCF+EL LKIL+
Sbjct: 121 HDGIKILVGNKVDRDSERAVSREEGMALAQQHKCSFFECSAKTSENVLQCFKELTLKILE 180
Query: 178 TPSLLSEGSSGVKKNIFKE----SPPQNDASTTGCCS 210
PSLL GS VK+ I K+ P+ S CCS
Sbjct: 181 VPSLLENGSVVVKQQIMKDKQVYQAPRGGGS---CCS 214
>gi|303276288|ref|XP_003057438.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461790|gb|EEH59083.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 218
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 115/183 (62%), Positives = 154/183 (84%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAI 65
+ + D++ KLLL+GDSGVGKS+LL+ FT D FE+ SPTIGVDFK+K++ GK++KL +
Sbjct: 15 APEPHDHVIKLLLVGDSGVGKSSLLVRFTDDVFEDQSPTIGVDFKLKYLNARGKRLKLTV 74
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLTSSYYRGAQGI+ VYD+T+R++F N+++IWAKE+DLY+T +DC+K+++
Sbjct: 75 WDTAGQERFRTLTSSYYRGAQGIVFVYDITKRESFENVSEIWAKEVDLYATVEDCVKIVI 134
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK+DKE R VS+KEG FA + GCLFLE SAK+R NV++ F+ELV ++LDTPSLL+E
Sbjct: 135 GNKIDKEKAREVSRKEGEAFAEDNGCLFLETSAKSRRNVKEAFDELVSRVLDTPSLLTEH 194
Query: 186 SSG 188
G
Sbjct: 195 DPG 197
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 159/204 (77%), Gaps = 6/204 (2%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
+ FDYL K+LL+GDS VGKS+LLL FT+DTFE+ ++PTIGVDF++K + + K++KL I
Sbjct: 2 NEPFDYLLKVLLVGDSNVGKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLTSSYYRGAQGI+ YDVTRR+TF ++ DIW +E+D+YST + +K++V
Sbjct: 62 WDTAGQERFRTLTSSYYRGAQGIVFAYDVTRRETFESIEDIWMREVDMYSTVDNAVKMIV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
NKVDKE+ER VS+ EG FAR++GCLF+E SAK + V Q FEELV+KILDTPSLL+
Sbjct: 122 ANKVDKEAEREVSRAEGAAFARKHGCLFVETSAKANMAVGQAFEELVMKILDTPSLLTAS 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+S + N+ N +T+ CC
Sbjct: 182 NSS-RLNV----GGSNSRTTSSCC 200
>gi|255076861|ref|XP_002502096.1| predicted protein [Micromonas sp. RCC299]
gi|226517361|gb|ACO63354.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 150/180 (83%), Gaps = 4/180 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
FD+ KLLL+GDSGVGKS+LLL F +DTFEELSPTIGVDFK+K++ + GK++KL +WDT
Sbjct: 11 HFDHTIKLLLVGDSGVGKSSLLLRFCNDTFEELSPTIGVDFKLKYMDMAGKRLKLTVWDT 70
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTS+YYRGAQGI+ VYD+TRRDTF LA++W+KE+++YST +C+K+++GNK
Sbjct: 71 AGQERFRTLTSAYYRGAQGIVYVYDITRRDTFEALAEVWSKEVEMYSTVDECVKIVIGNK 130
Query: 129 VDK----ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VDK E V+++EG FARE G LFLECSAKT+V+V + FEELV +++TPSL+ E
Sbjct: 131 VDKAKGGREEGWVTREEGETFARESGSLFLECSAKTKVSVREAFEELVKGVMETPSLMEE 190
>gi|145346519|ref|XP_001417734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577962|gb|ABO96027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 154/208 (74%), Gaps = 7/208 (3%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMK 62
+S + +D+L K+LL+GDSGVGKS+LL F SD+F+E PT+GVDFK+KHV + G ++K
Sbjct: 2 TSDDARAYDHLVKILLVGDSGVGKSSLLARFISDSFDEQGPTVGVDFKLKHVDVDGTRLK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L +WDTAGQERFRTLTSSYYRGA G++ VYDVT R++F N + W KE+++Y T + +K
Sbjct: 62 LTVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSRESFENARETWRKEVEMYGTIANSVK 121
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+++GNK+D+E ER V++KEG+ FA+EYGCLFLECSAKT+V V + F+ELV ILD P LL
Sbjct: 122 IVIGNKIDREDERTVARKEGVAFAKEYGCLFLECSAKTKVRVAEAFDELVKGILDAPGLL 181
Query: 183 -SEGSSGVKKNIFKESPPQNDASTTGCC 209
E GVK + D + GCC
Sbjct: 182 VDEVDDGVKLGAYA------DRAGGGCC 203
>gi|307111814|gb|EFN60048.1| hypothetical protein CHLNCDRAFT_133281 [Chlorella variabilis]
Length = 202
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 124/209 (59%), Positives = 155/209 (74%), Gaps = 7/209 (3%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
MA +Q E D+ FK+LL+GDSGVGKS+LLL F + FEEL PTIGVDFK K + LGGK+
Sbjct: 1 MAGLPAQVEVDHTFKILLVGDSGVGKSSLLLRFATGGFEELVPTIGVDFKAKIIELGGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
++L +WDTAGQERFRTLTSSYYRGAQGII+VYDV+R +TF +LADIW +E+D+Y T ++
Sbjct: 61 IRLTVWDTAGQERFRTLTSSYYRGAQGIILVYDVSRAETFDSLADIWLREVDMYGTVEES 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+K++V NK D R VS G+ FAR +GCLF+E SAK V VEQ FEELV KIL+TPS
Sbjct: 121 VKMVVANKTDLAETREVSTDMGVAFARAHGCLFVETSAKGNVAVEQAFEELVHKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
LL+ SSG + K PQ+ + CC
Sbjct: 181 LLA--SSGSTFGL-KTKQPQSSS----CC 202
>gi|308803965|ref|XP_003079295.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
gi|116057750|emb|CAL53953.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
Length = 204
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 157/209 (75%), Gaps = 9/209 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKL 63
S+ + +D+L K+LL+GDSGVGKS+++ F SD+FEELSPT+GVDFK+K + + GK++KL
Sbjct: 2 SSDEAPYDHLVKILLVGDSGVGKSSIVTRFVSDSFEELSPTVGVDFKLKRLDVDGKRLKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
+WDTAGQERFRTLTSSYYRGA G++ VYDVT +F L + W KE+D+Y T + +K+
Sbjct: 62 TVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSAASFAALRETWLKEVDMYGTIESSVKI 121
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
++GNK+DK+SER V+++EG+ FA+E GCLFLECSAKT+V V + F+ELV IL+TP LL
Sbjct: 122 VIGNKIDKDSERAVTREEGVAFAKENGCLFLECSAKTKVRVAEAFDELVKGILETPGLLV 181
Query: 184 EGSSG---VKKNIFKESPPQNDASTTGCC 209
+ + G VK + D + +GCC
Sbjct: 182 DSNDGEDRVKLGAYA------DHAGSGCC 204
>gi|388521533|gb|AFK48828.1| unknown [Medicago truncatula]
Length = 158
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 106/157 (67%), Positives = 134/157 (85%)
Query: 54 VALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDL 113
+ +GGK++KL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL+++W+KE++L
Sbjct: 2 LTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELEL 61
Query: 114 YSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173
YSTNQ+C+K+LVGNKVDK+SER VS++EG+ A+E GCL LECSAKTR NVE+CFEEL L
Sbjct: 62 YSTNQECVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELAL 121
Query: 174 KILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
KI++ PSLL EGS+ K+N+ K+ + GCCS
Sbjct: 122 KIMEAPSLLEEGSAATKRNVLKQKQEPQSSQNGGCCS 158
>gi|255556840|ref|XP_002519453.1| protein with unknown function [Ricinus communis]
gi|223541316|gb|EEF42867.1| protein with unknown function [Ricinus communis]
Length = 325
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 109/168 (64%), Positives = 143/168 (85%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
++D+ FK++LIGDS VGKS+L++SF S EL TIG+D K+K + +GGK++KL IWDT
Sbjct: 110 DYDHSFKIVLIGDSNVGKSSLIVSFISGAVTELPNTIGMDIKMKQITVGGKRLKLTIWDT 169
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYR A GII+VYDVT++ +FTNL ++W KE++LYSTN+DCIK+LVGNK
Sbjct: 170 AGQERFRTLTSSYYRDAHGIILVYDVTQKQSFTNLENLWTKEVELYSTNKDCIKMLVGNK 229
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
VD+ESER VS++EG+D A++ G LFLE SAKTR NVE+CF++L LK+L
Sbjct: 230 VDRESERAVSREEGMDLAKQQGFLFLESSAKTRENVEKCFDDLALKML 277
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 114/133 (85%), Positives = 124/133 (93%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS QEFDYLFKLL+IGDSGVGKS+LLLSFTSD FE+LSPTIGVDFK+K+V +GGKK
Sbjct: 1 MDSSXGHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL +IWAKEIDLYSTNQD
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLFEIWAKEIDLYSTNQDY 120
Query: 121 IKLLVGNKVDKES 133
IK+LVGNK+DK S
Sbjct: 121 IKMLVGNKLDKVS 133
>gi|414586250|tpg|DAA36821.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 160
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 109/122 (89%), Positives = 121/122 (99%)
Query: 54 VALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDL 113
V++GGKK+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDV+RR+TFTNL+DIWAKEIDL
Sbjct: 2 VSIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDL 61
Query: 114 YSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173
YSTNQDC+K+LVGNKVDKESER V+KKEGI+FAREYGCLFLECSAKT+VNVEQCFEELVL
Sbjct: 62 YSTNQDCVKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVL 121
Query: 174 KI 175
K+
Sbjct: 122 KV 123
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 110/125 (88%), Positives = 121/125 (96%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q EFDYLFKLLLIGDSGVGKS+LLL FT+D+FE+LSPTIGVDFK+K V +GGKK+KLAIW
Sbjct: 13 QPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAIW 72
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLTSSYYRGAQG+IMVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LVG
Sbjct: 73 DTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVG 132
Query: 127 NKVDK 131
NKVDK
Sbjct: 133 NKVDK 137
>gi|301100814|ref|XP_002899496.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103804|gb|EEY61856.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 154/203 (75%), Gaps = 7/203 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLLLIGD+GVGKS++LL FT DTF++ L TIGVDFK+K + + GKK+K+ IWDT
Sbjct: 4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDT 63
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST--NQDCIKLLVG 126
AGQERFRTLTSSYYRGAQGI++VYDV RRDTF NL D+W +E+++YS +D +KLLVG
Sbjct: 64 AGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLLVG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK+DK ERVVS++E D+AR G LF+E SAKT++ ++Q F E+V KIL+ P+LLS +
Sbjct: 123 NKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTA 180
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+ ++ + GCC
Sbjct: 181 PRSRGRKL-DAKAEKSGGGNGCC 202
>gi|348677906|gb|EGZ17723.1| hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae]
Length = 202
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 154/203 (75%), Gaps = 7/203 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLLLIGD+GVGKS++LL FT DTF++ L TIGVDFK+K + + GKK+K+ IWDT
Sbjct: 4 YDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIWDT 63
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST--NQDCIKLLVG 126
AGQERFRTLTSSYYRGAQGI++VYDV RRDTF NL D+W +E+++YS +D +KLLVG
Sbjct: 64 AGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLLVG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK+DK ERVVS++E D+AR G LF+E SAKT++ ++Q F E+V KIL+ P+LLS +
Sbjct: 123 NKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSNTA 180
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+ + + +GCC
Sbjct: 181 PRSRGRKL-DGKAEKSGGGSGCC 202
>gi|412988755|emb|CCO15346.1| unknown [Bathycoccus prasinos]
Length = 225
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 119/220 (54%), Positives = 160/220 (72%), Gaps = 11/220 (5%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFT-SDT-FEELSPTIGVDFKIKHVALG-- 57
A+ T +E+ +L K+LL+GDSGVGKS+LL F DT E++S TIGVDFK+K+V L
Sbjct: 6 AAGTKFREYSHLIKVLLVGDSGVGKSSLLSRFIDPDTDLEDISTTIGVDFKLKYVKLKQT 65
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
+ +KL +WDTAGQERFRTLTSSYYRGAQGI+ VYD++ +++F ++ ++W KE+D+YST
Sbjct: 66 NETVKLTVWDTAGQERFRTLTSSYYRGAQGIVFVYDISSKESFESVENVWQKEVDMYSTI 125
Query: 118 QDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
D IK++VGNKVDKE+ER V K++ I FAR GCLFLECSAKTRV+V++ F+EL+ I++
Sbjct: 126 PDAIKIVVGNKVDKENERKVKKEDAIAFARRNGCLFLECSAKTRVSVKEIFDELLQAIVE 185
Query: 178 TPSLLSEGSSGVKKNI-------FKESPPQNDASTTGCCS 210
TPSLL +G SG K E+ + T CCS
Sbjct: 186 TPSLLKDGPSGNSKGARGGVGVNLSEARGDGNIVTRNCCS 225
>gi|298712751|emb|CBJ33348.1| Rab18, RAB family GTPase [Ectocarpus siliculosus]
Length = 210
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/210 (56%), Positives = 156/210 (74%), Gaps = 7/210 (3%)
Query: 4 STSQQE-FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKM 61
+T Q E +D+LFKLLL+GD+ VGKS+++L FT DTF++ L TIGVDFK+K V GGK++
Sbjct: 2 TTRQAEPYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRI 61
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST--NQD 119
K+ IWDTAGQERFRTLTSSYYRGAQGI++VYDVTR +TF NL+ W +E++ Y ++
Sbjct: 62 KMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSK-WLEEVETYHPGRGRE 120
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
+KLLVGNKVDK ERVV++ + ++AR G LFLE SAKT+V V+Q FEE+V KILD P
Sbjct: 121 VVKLLVGNKVDK--ERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNP 178
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
SLL+ + G ++ S P + + G C
Sbjct: 179 SLLANTAPGRPRDTVDPSRPNPNQAGGGLC 208
>gi|428165742|gb|EKX34731.1| hypothetical protein GUITHDRAFT_175416 [Guillardia theta CCMP2712]
Length = 201
Score = 231 bits (589), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 143/181 (79%), Gaps = 3/181 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
FD+ FKLLL GDSGVGKS++LL FT D+F P TIGVDFK+K + + GKK+KL IWDT
Sbjct: 8 FDHRFKLLLTGDSGVGKSSILLRFTDDSFATDQPATIGVDFKVKSIDVEGKKVKLTIWDT 67
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQG+I+VYDVTR++TF NL + W KE+D+Y+ +KLLVGNK
Sbjct: 68 AGQERFRTLTSSYYRGAQGVILVYDVTRKETFENL-EQWLKEVDMYTNRDGVVKLLVGNK 126
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+DK + R V++ +GI+FAR G LF+ECSAK + ++Q FEELV KILD+P L++ SG
Sbjct: 127 IDK-ANREVTRADGIEFARNRGMLFIECSAKAKTGIQQAFEELVQKILDSPHLVNNEVSG 185
Query: 189 V 189
+
Sbjct: 186 L 186
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 141/199 (70%), Gaps = 3/199 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DY FK+LL+GDSGVGKS +L FTS FEE + TIGVDFK+K++ GK+ KL IWDTA
Sbjct: 7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L W +E D+YST + IK++V NKV
Sbjct: 67 GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D ++R VS +EG DFAR +GCLF+E SA+ + V Q FEEL+LKILDTP LL + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVGG 186
Query: 190 KKNIFKESPPQNDASTTGC 208
K P A C
Sbjct: 187 IK--LGAVPTGQQAGVCSC 203
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 146/200 (73%), Gaps = 10/200 (5%)
Query: 1 MASSTSQQ-EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGG 58
MASS Q +D+LFKLL+IGD+ VGKS++L+ FT D F+E + TIGVDFK+KH+ L
Sbjct: 1 MASSRPQAFPYDHLFKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNS 60
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN- 117
K++KL +WDTAGQERFRTLTSSYYRGAQG++MVYDVTRRD+F NL D W KEI LYS N
Sbjct: 61 KRIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-DHWLKEIQLYSPNS 119
Query: 118 -QDCIKLLVGNKVD-----KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL 171
+ +KLLVGNK+D E ER V + E ++ARE+G LFLE SAKT+ +++ F E+
Sbjct: 120 GEGVVKLLVGNKIDLPEMGGEHERQVDRDEAEEWAREHGMLFLEASAKTKAGIQESFMEV 179
Query: 172 VLKILDTPSLLSEGSSGVKK 191
V KIL+ P LL G K
Sbjct: 180 VYKILEDPDLLLNTVPGQPK 199
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 111/179 (62%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DY FK+LL+GDSGVGKS +L FTS +FEE + TIGVDFK+K++ GK+ KL +WDTA
Sbjct: 6 DYTFKVLLVGDSGVGKSCILTRFTSGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVWDTA 65
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII VYDVTRR+TF L W +E D+YST + I+++V NK
Sbjct: 66 GQERFRTLTSSYYRGAQGIIFVYDVTRRETFEALEGAWMREWDMYSTVEGAIQMVVANKT 125
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D +S R V+ +EG DFAR +GCLF+E SAK V V Q FEEL+ KILDTP+LL + G
Sbjct: 126 DLDSARQVATQEGHDFARRHGCLFVETSAKGNVAVGQAFEELLAKILDTPALLETTAVG 184
>gi|326529385|dbj|BAK01086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 155
Score = 224 bits (570), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 106/154 (68%), Positives = 126/154 (81%), Gaps = 1/154 (0%)
Query: 57 GGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST 116
GGKK+KL IWDTAGQERFRT+TSSYYRGAQGII+VYDV +R++FTNL D+W KEID S+
Sbjct: 1 GGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDVAKRESFTNLGDVWTKEIDSNSS 60
Query: 117 NQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
N+DCIK+LVGNKVDK+ ER V+++EG+ FA+E GCLFLE SAKTR NVE CFEELVLKIL
Sbjct: 61 NKDCIKMLVGNKVDKDDERTVTREEGLAFAQESGCLFLESSAKTRENVENCFEELVLKIL 120
Query: 177 DTPSLLSEGSSG-VKKNIFKESPPQNDASTTGCC 209
+ PSLL EGSS VK+NI K+ + CC
Sbjct: 121 EVPSLLEEGSSSVVKRNILKQQQESHAKYGGRCC 154
>gi|325186904|emb|CCA21448.1| Rab18 family GTPase putative [Albugo laibachii Nc14]
Length = 201
Score = 221 bits (564), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 111/186 (59%), Positives = 146/186 (78%), Gaps = 5/186 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+LFK+LLIGD+GVGKS++LL FT D F+ L TIGVDFK+K + + ++K+ IW
Sbjct: 2 ESYDHLFKILLIGDAGVGKSSILLRFTDDKFDGNLQSTIGVDFKVKMMQVDSSRIKVTIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST--NQDCIKLL 124
DTAGQERFRTLTSSYYRGAQGI++VYDV+RR+TF +L D W +EI++YS +D +KLL
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVSRRETFESL-DTWLREIEIYSPAGGRDVVKLL 120
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNKVDK+ ER VS+KE D+AR G LFLE SAKTR+ + Q F+E+V KIL+ PSLL+
Sbjct: 121 VGNKVDKQ-ERSVSRKEAEDWARNKGMLFLESSAKTRIGILQVFDEVVQKILENPSLLAS 179
Query: 185 GSSGVK 190
+ V+
Sbjct: 180 TAPRVR 185
>gi|213515510|ref|NP_001133260.1| Ras-related protein Rab-18 [Salmo salar]
gi|209148105|gb|ACI32921.1| Ras-related protein Rab-18 [Salmo salar]
Length = 206
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 133/169 (78%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +A+ G KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAVDGNSAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTRLEN-WLNELETYCTRNDLVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
RVV + EG+ FAR++ LF+E SAKTR V+ FEELV KIL TP L
Sbjct: 128 ENRVVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGL 176
>gi|320167405|gb|EFW44304.1| GTP-binding protein yptV3 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 140/187 (74%), Gaps = 3/187 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FKLLL+G+S GKS+L++ FT + F+E LS TIGVDFK+K + L +KL IWDTAGQE
Sbjct: 11 FKLLLVGESNTGKSSLIMRFTDNVFDEDLSATIGVDFKVKQMFLNDTTIKLTIWDTAGQE 70
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLTSS+YRGA G+I VYDVTRR+TF D W E+D Y+TN D +K+L+GNK+D+
Sbjct: 71 RFRTLTSSFYRGAHGVIFVYDVTRRETFDTALDTWLTEVDTYATN-DVVKMLIGNKIDQT 129
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-SSGVKK 191
ER VS+ EG+ FA+ + LF+ECSA+TRV VEQ FEELV K+ DTP+L G ++ V+
Sbjct: 130 EERQVSRAEGLAFAQRHSMLFIECSARTRVGVEQAFEELVQKMYDTPALWRTGPTNNVQL 189
Query: 192 NIFKESP 198
+E+P
Sbjct: 190 GGAEEAP 196
>gi|384485982|gb|EIE78162.1| hypothetical protein RO3G_02866 [Rhizopus delemar RA 99-880]
Length = 203
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/178 (61%), Positives = 139/178 (78%), Gaps = 4/178 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
KLLLIG+S VGKS+LLL FT DTF EE+S TIGVDFK+ + + K KL IWDTAG
Sbjct: 8 LKLLLIGNSNVGKSSLLLRFTDDTFLPQEEVSATIGVDFKVSMMDVNDKTYKLTIWDTAG 67
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRTLTSSYYRGAQG+I+VYDV+ R+TF L + W E++ Y ++ D +K++VGNKVD
Sbjct: 68 QERFRTLTSSYYRGAQGVILVYDVSNRETFDALNN-WWNEVNTYCSSPDVVKMIVGNKVD 126
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
KES RVVS +EG++FAR+ LF+ECSAKT+V V+Q FEELV KI++TPSL + ++
Sbjct: 127 KESSRVVSYEEGLNFARKLQTLFVECSAKTKVGVKQAFEELVEKIIETPSLWQKNTTN 184
>gi|440797100|gb|ELR18195.1| rasrelated protein Rab-18-like, putative [Acanthamoeba castellanii
str. Neff]
Length = 209
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 104/181 (57%), Positives = 141/181 (77%), Gaps = 3/181 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKK 60
++ S FD+LFKLL+IGDS VGKS++LL FT D F++ P TIGVDFK+K + LG K+
Sbjct: 3 GTTGSASHFDHLFKLLIIGDSSVGKSSILLRFTEDEFDDEHPVTIGVDFKVKTIQLGAKR 62
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+ L IWDTAGQE+FR+LTSSYYRG QGII+VYDV+ R++F +L+ +W EI++Y N D
Sbjct: 63 INLTIWDTAGQEKFRSLTSSYYRGTQGIILVYDVSSRESFQHLS-VWLNEIEMYCNNSDV 121
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+KLLV NK+D +R VS++EG+ FA+ +F+ECSAKT++ ++Q FEELV KIL+TPS
Sbjct: 122 VKLLVANKIDL-GDRQVSREEGLAFAKSKAMVFIECSAKTKLGIQQAFEELVTKILETPS 180
Query: 181 L 181
L
Sbjct: 181 L 181
>gi|388490950|gb|AFK33541.1| unknown [Medicago truncatula]
Length = 122
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/121 (83%), Positives = 113/121 (93%)
Query: 90 MVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREY 149
MVYDVTRR+TFTNL+DIWAKEIDLYSTNQDCIK+LVGNKVDKESER V+KKE +DFAR+Y
Sbjct: 1 MVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEAVDFARQY 60
Query: 150 GCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
GCL+ ECSAKTRVNVEQCFEELV+KILDTPSLL+EGSSGVKKNIFK+ P + DAS + CC
Sbjct: 61 GCLYTECSAKTRVNVEQCFEELVMKILDTPSLLAEGSSGVKKNIFKQKPQEFDASPSSCC 120
Query: 210 S 210
S
Sbjct: 121 S 121
>gi|51010979|ref|NP_001003449.1| ras-related protein Rab-18-B [Danio rerio]
gi|82183235|sp|Q6DHC1.1|RB18B_DANRE RecName: Full=Ras-related protein Rab-18-B; Flags: Precursor
gi|50370256|gb|AAH76054.1| RAB18B, member RAS oncogene family [Danio rerio]
Length = 205
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 147/200 (73%), Gaps = 8/200 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +A+ G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL--SEGSSGVK 190
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KIL TP L S + GV+
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQ 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
++ PQ + G CS
Sbjct: 187 ---LSDNEPQRQGACGGYCS 203
>gi|148224120|ref|NP_001079868.1| uncharacterized protein LOC379558 [Xenopus laevis]
gi|33416686|gb|AAH56054.1| MGC69017 protein [Xenopus laevis]
Length = 205
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 147/199 (73%), Gaps = 10/199 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSSGVKK 191
+ R V + EG+ FAR++ L++E SAKTR V+ FEELV KI+ TP L SE + GV+
Sbjct: 128 N-REVDRNEGLKFARKHSMLYIEASAKTRDGVQCAFEELVEKIIQTPGLWESETNRGVRL 186
Query: 192 NIFKESPPQNDASTTGCCS 210
+ ++ T G C+
Sbjct: 187 S------SEDGGGTRGLCA 199
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 152/210 (72%), Gaps = 17/210 (8%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+LFKLLLIGD+GVGKS++LL FT D F++ TIGVDFK+K + + K++K+ IW
Sbjct: 44 EPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIW 103
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYST--NQDCIKLL 124
DTAGQERFRTLTSSYYRGAQGII+VYDV RR++F NL + W +E+++YST ++ +K+L
Sbjct: 104 DTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENL-NHWLQEVEVYSTGGGREIVKVL 162
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNKVDK ER+V ++E +AR G LFLE SAKTR + Q F E+V KILD PSLL+
Sbjct: 163 VGNKVDK--ERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLLTN 220
Query: 185 GSSGVKK-NIFKESPPQNDASTTG----CC 209
+ G + N+ Q DA+ G CC
Sbjct: 221 TAPGRPRVNL------QADAAAKGSGGYCC 244
>gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267454|emb|CAJ81541.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134026214|gb|AAI35987.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 206
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 134/169 (79%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 137/181 (75%), Gaps = 10/181 (5%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLL+IGD+GVGKS++L+ FT D F+E + TIGVDFK+KH+ L K++KL +WDT
Sbjct: 18 YDHLFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNNKRIKLTVWDT 77
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN--QDCIKLLVG 126
AGQERFRTLTSSYYRGAQG++MVYDVTRRD+F NL + W KE+ LYS N + +KLLVG
Sbjct: 78 AGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-EQWLKEVKLYSPNNGEGVVKLLVG 136
Query: 127 NKVDKES------ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
NK+D ER V + E ++AR G LFLE SAKTR+ V++ F E+V KIL+ P
Sbjct: 137 NKIDLADGDGSGYERQVDRHEAEEWARNQGMLFLEASAKTRMGVQESFMEVVHKILEDPD 196
Query: 181 L 181
L
Sbjct: 197 L 197
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 137/178 (76%), Gaps = 3/178 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT DTF+ E S TIGVDFK+K +A+ G K KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYTTRNDIVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
+R V + EG+ FAR++ LF+E SAKT+ V+ FEELV KIL TP L + G K
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESENQGQK 184
>gi|221487606|gb|EEE25838.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 212
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 142/204 (69%), Gaps = 7/204 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+L KLLLIGDSGVGKS++LL F D F E TIGVDFK+K + +G ++KLAIWDT
Sbjct: 11 YDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGDMRLKLAIWDT 70
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGIIMVYDV+ R +F NL W EI YSTN D + +LV NK
Sbjct: 71 AGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNADAVLMLVANK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE---- 184
VDK + + V ++EG FA + G LF+E SAKTR V+ FEELV KILDTPSLL
Sbjct: 130 VDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLVNTSPI 188
Query: 185 GSSGVKKNIFKESPPQNDASTTGC 208
G++ + + +E N A+ C
Sbjct: 189 GAAPRQLSHAREGDALNAAAGCSC 212
>gi|237830465|ref|XP_002364530.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962194|gb|EEA97389.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221507403|gb|EEE33007.1| rab5, putative [Toxoplasma gondii VEG]
Length = 212
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 142/204 (69%), Gaps = 7/204 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+L KLLLIGDSGVGKS++LL F D F E TIGVDFK+K + +G ++KLAIWDT
Sbjct: 11 YDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGDMRLKLAIWDT 70
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGIIMVYDV+ R +F NL W EI YSTN D + +LV NK
Sbjct: 71 AGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNADAVLMLVSNK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE---- 184
VDK + + V ++EG FA + G LF+E SAKTR V+ FEELV KILDTPSLL
Sbjct: 130 VDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLVNTSPI 188
Query: 185 GSSGVKKNIFKESPPQNDASTTGC 208
G++ + + +E N A+ C
Sbjct: 189 GAAPRQLSHAREGDALNAAAGCSC 212
>gi|89258427|gb|ABD65437.1| Rab18 [Suberites domuncula]
Length = 202
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 133/169 (78%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IGDSG GKS+LLL FT+DTF+ ++S TIGVDFK+K + L K+ KL+IWDTAGQE
Sbjct: 6 LKLLIIGDSGAGKSSLLLRFTNDTFDPDVSATIGVDFKVKTLVLDEKRTKLSIWDTAGQE 65
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYD + R++F L ++W E+D Y+T +D IK+LV NK+DK
Sbjct: 66 RFRTLTPSYYRGAQGVILVYDASSRESFEGL-EVWLNELDTYATKKDLIKMLVANKIDKT 124
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
SER VS+ +G+ FAR LF+E SAKTR V++ FEELV KIL TPSL
Sbjct: 125 SERQVSRSDGLQFARRNSMLFIEASAKTRDGVQEAFEELVHKILQTPSL 173
>gi|401411617|ref|XP_003885256.1| Rab1-prov protein, related [Neospora caninum Liverpool]
gi|325119675|emb|CBZ55228.1| Rab1-prov protein, related [Neospora caninum Liverpool]
Length = 212
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 110/178 (61%), Positives = 132/178 (74%), Gaps = 3/178 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+L KLLLIGDSGVGKS++LL F+ D F E TIGVDFK+K + +G ++KLAIWDT
Sbjct: 11 YDHLLKLLLIGDSGVGKSSILLRFSEDVFNEKQLSTIGVDFKVKAITVGDARLKLAIWDT 70
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGIIMVYDV+ R +F +L W EI YSTN D + +LV NK
Sbjct: 71 AGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLDLQS-WLDEIYRYSTNADAVIMLVANK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
+DK + V ++EG FA + G LF+E SAKTR V+ FEELV KILDTPSLL S
Sbjct: 130 IDKRTVE-VERREGEAFAYQKGMLFVETSAKTRQGVDHAFEELVQKILDTPSLLENTS 186
>gi|410924888|ref|XP_003975913.1| PREDICTED: ras-related protein Rab-18-B-like [Takifugu rubripes]
Length = 205
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 137/176 (77%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +A+ G + KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+RRDTF L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRDTFVKLEN-WLNELETYTTRMDLVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+R V + EG+ FAR++ LF+E SAKT+ V+ FEELV KIL TP L ++G
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDNTG 182
>gi|432913216|ref|XP_004078963.1| PREDICTED: ras-related protein Rab-18-B-like [Oryzias latipes]
Length = 205
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 115/199 (57%), Positives = 144/199 (72%), Gaps = 6/199 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT DTF+ E S TIGVDFK+K +A+ G K KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIEGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+RRD+FT L + W E++ Y+T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRDSFTKLEN-WLNELETYTTRNDIVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+R V + EG+ FAR++ LF+E SAKT+ V+ FEELV KIL TP L S G
Sbjct: 128 -DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWE--SEGPGHR 184
Query: 193 IFKESPPQNDA-STTGCCS 210
+ SP Q + G CS
Sbjct: 185 VQLGSPDQAGGRACGGYCS 203
>gi|147900430|ref|NP_001084300.1| RAB18, member RAS oncogene family [Xenopus laevis]
gi|49256207|gb|AAH74233.1| RAB18 protein [Xenopus laevis]
Length = 206
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV RRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 137/181 (75%), Gaps = 4/181 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
K+LLIG S VGKS+LLL FT D F EE + TIGVD++IK + +GGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T+ D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIITYDVTQRDTFDALP-TWFNELETFTTSDDVVKVIVGNKVD 128
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
KE RVV+ KEG +FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTKEGQEFAEKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGER 188
Query: 191 K 191
+
Sbjct: 189 R 189
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 113/216 (52%), Positives = 145/216 (67%), Gaps = 10/216 (4%)
Query: 1 MASSTSQQ-EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGG 58
MA+ Q +DYLFK+L+IGD+ VGKS++LL FT D+F+E + TIGVDFK+KH+ + G
Sbjct: 1 MAAPPPQTFPYDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEG 60
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYS--T 116
K++KL IWDTAGQERFRTLTSSYYRGA G+++VYDVTR D+F NL W KE+ +YS
Sbjct: 61 KRVKLTIWDTAGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQ-WLKEVQMYSPGN 119
Query: 117 NQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
+ +KLLVGNK D ER V +E +AR G LFLE SAKTR+ + Q F E+V K+L
Sbjct: 120 GESVVKLLVGNKCD--LERQVPFEEADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKML 177
Query: 177 DTPSLLSEGSSGVKKNIFKES---PPQNDASTTGCC 209
+ P L+ G K K P D +GCC
Sbjct: 178 ENPETLATAVPGRPKVQIKPQHARPNMMDDEESGCC 213
>gi|47228002|emb|CAF97631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 143/198 (72%), Gaps = 3/198 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT D F+ EL+ TIGVDFK+K +A+ G + KLAIWDTAGQE
Sbjct: 9 LKLLIIGESGVGKSSLLLRFTDDMFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVT+RDTF L + W E++ Y++ + +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFAKLEN-WLNELETYTSRNNLVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+R V + EG+ FAR++ LF+E SAKT+ V+ FEELV KIL TP L S G +
Sbjct: 128 -DREVDRHEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDSPGQRLQ 186
Query: 193 IFKESPPQNDASTTGCCS 210
+ ++ + G CS
Sbjct: 187 LTEQQQQGGGRACGGYCS 204
>gi|27882648|gb|AAH43996.1| RAB18 protein, partial [Xenopus laevis]
Length = 212
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G KLAIWDTAGQE
Sbjct: 15 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQE 74
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV RRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 75 RFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDKE 133
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 134 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 181
>gi|340375152|ref|XP_003386101.1| PREDICTED: ras-related protein Rab-18-B-like [Amphimedon
queenslandica]
Length = 201
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/180 (58%), Positives = 138/180 (76%), Gaps = 3/180 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
D K+L+IGDSGVGKS+LLL F ++TF+ + + TIGVDFK+K V L GK++KLAIWDTA
Sbjct: 3 DVSLKILIIGDSGVGKSSLLLRFVNNTFDPDQASTIGVDFKVKTVQLAGKRVKLAIWDTA 62
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLT +YYRGAQG+I+VYDV DTF L ++W E+D Y+T +D +K+LVGNK+
Sbjct: 63 GQERFRTLTPAYYRGAQGVILVYDVCLPDTFEGL-EVWLNELDTYATKKDLVKMLVGNKI 121
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
DK +ER +S+ +G+ FAR LF+E SAKTR V++ FEELV KIL P L +E +S V
Sbjct: 122 DK-TERKISRADGLQFARRNSMLFIESSAKTRDGVQEAFEELVQKILQNPDLYTENTSTV 180
>gi|34068436|gb|AAQ56773.1| ras-related GTP-binding protein Rab18 [Pelophylax ridibundus]
Length = 205
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKAKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFARL-DNWLNELETYCTRNDIVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 175
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 137/181 (75%), Gaps = 4/181 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
K+LLIG S VGKS+LLL FT D F EE + TIGVD++IK + +GGK+ KL+IWDTAG
Sbjct: 9 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 68
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T++D +K++VGNKVD
Sbjct: 69 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKVD 127
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
KE RVV+ +EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 128 KEFSRVVTTEEGQGFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGER 187
Query: 191 K 191
+
Sbjct: 188 R 188
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 136/181 (75%), Gaps = 4/181 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
K+LLIG S VGKS+LLL FT D F EE + TIGVD++IK + +GGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T+ D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSDDVVKIIVGNKVD 128
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
KE RVV+ +EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTQEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGDR 188
Query: 191 K 191
+
Sbjct: 189 R 189
>gi|302828392|ref|XP_002945763.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300268578|gb|EFJ52758.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 212
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/179 (55%), Positives = 136/179 (75%), Gaps = 1/179 (0%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
D+ K+LL+GDSGVGK++LL F D+F+E ++ TIGVDF +K +++ K++KL +WDT
Sbjct: 12 IDFTIKILLLGDSGVGKTSLLTRFAHDSFDEKVASTIGVDFAVKKLSVYDKRVKLTVWDT 71
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE+FRTLTS++YRGA+GII+VYDV+R DT +L + W +E++LY T D ++++V NK
Sbjct: 72 AGQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELELYGTEADAVRMVVANK 131
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
VD R VS EG DFAR +GCLF+E SAKT + V FEELVLKIL+TPSLL + +
Sbjct: 132 VDVGDARRVSWHEGSDFARRHGCLFVETSAKTNIAVANAFEELVLKILETPSLLEDAGA 190
>gi|57530682|ref|NP_001006355.1| ras-related protein Rab-18 [Gallus gallus]
gi|82233892|sp|Q5ZLG1.1|RAB18_CHICK RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|53129987|emb|CAG31432.1| hypothetical protein RCJMB04_6g4 [Gallus gallus]
Length = 206
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 136/180 (75%), Gaps = 5/180 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS--GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVK 186
>gi|432926809|ref|XP_004080935.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-18-like
[Oryzias latipes]
Length = 204
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ E S TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
S V + EG+ FAR++ LF+E SAKT+ V+ FEELV K++ TP + G
Sbjct: 128 SHE-VDRAEGLKFARKHSTLFIEASAKTKDGVQCAFEELVEKVIQTPGXWQSENHG 182
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/109 (90%), Positives = 107/109 (98%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
EFDYLFKLL+IGDSGVGKS+LLLSFTSDTFE+LSPTIGVDFK+K+V +GGKK+KLAIWDT
Sbjct: 2 EFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDT 61
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL D+WAKEIDLYSTN
Sbjct: 62 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRDVWAKEIDLYSTN 110
>gi|348525554|ref|XP_003450287.1| PREDICTED: ras-related protein Rab-18-like [Oreochromis niloticus]
Length = 204
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 107/176 (60%), Positives = 134/176 (76%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ E S TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLSELETYCTRNDLVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+ + + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L + G
Sbjct: 128 NHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSENHG 182
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 141/198 (71%), Gaps = 4/198 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT D F+ E S TIGVDFK+K + + G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRG QG I+VYDVT R++F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTSRESFSNVEN-WLNELDTYTTNHDIVKMLVGNKCDLE 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+RVVSK+EG AR++ +F+E SAKTR V+ FEELV I+ TP L +S N
Sbjct: 129 DKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEAANSAGGIN 188
Query: 193 IFKESPPQNDASTTGCCS 210
+ +S N + + C+
Sbjct: 189 V--KSDNNNASGDSQSCA 204
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 211 bits (537), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 139/174 (79%), Gaps = 2/174 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLL+IGDSGVGKS LLL F D F + TIGVDFK+K+++L GK++KLAIWDT
Sbjct: 6 YDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWDT 65
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGI++VYDVT R++F NL + W +E+ Y+T++ +K+LV NK
Sbjct: 66 AGQERFRTLTSSYYRGAQGIVLVYDVTSRESFENL-EYWLEEVRKYATSRSSVKMLVANK 124
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
VD+ + V+++EG FA E+ LF+E SAK +V V++ F++LVLKILDTP LL
Sbjct: 125 VDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLL 178
>gi|410933135|ref|XP_003979947.1| PREDICTED: ras-related protein Rab-18-like isoform 2 [Takifugu
rubripes]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 132/176 (75%), Gaps = 2/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ + + TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTR++TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L G
Sbjct: 128 ENREVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 183
>gi|224044745|ref|XP_002187766.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 136/180 (75%), Gaps = 5/180 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +++LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVQMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS--GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNRGVK 186
>gi|348565773|ref|XP_003468677.1| PREDICTED: ras-related protein Rab-18-like [Cavia porcellus]
Length = 206
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 145/200 (72%), Gaps = 7/200 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
+ +ES + G CS
Sbjct: 187 LSHMEES--HGGGACGGYCS 204
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 136/181 (75%), Gaps = 4/181 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
K+LLIG S VGKS+LLL FT D F EE + TIGVD++IK + +GGK+ KL+IWDTAG
Sbjct: 10 LKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTAG 69
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRTLTSSYYRGAQG+I+ YDVT+RDTF L W E++ ++T++D +K++VGNKVD
Sbjct: 70 QERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKVD 128
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
KE RVV+ EG FA + GCLF+ECSAK V V F+ELV +I+ TPSL + + G +
Sbjct: 129 KEFSRVVTTDEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQKTAPGDR 188
Query: 191 K 191
+
Sbjct: 189 R 189
>gi|395539893|ref|XP_003771898.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Sarcophilus
harrisii]
Length = 205
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|221127104|ref|XP_002163996.1| PREDICTED: ras-related protein Rab-18-like [Hydra magnipapillata]
Length = 204
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 142/199 (71%), Gaps = 7/199 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LL+ FT DTF++ + TIGVDFK+K V + G +MKLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLIRFTDDTFDQDIGATIGVDFKVKTVEVDGNRMKLALWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+ R TF L D W E + Y+T QD +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSVRQTFDKLND-WLNECETYATKQDIVKMLVGNKIDKP 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS-EGSSGVKK 191
R V+++EG+ FAR + LF+E SAKT+ VE FEELV KIL TP L E S +
Sbjct: 128 G-RQVTRQEGLQFARRHSMLFIEASAKTKDGVECAFEELVEKILQTPGLWEKESKSTIGL 186
Query: 192 NIFKESPPQNDASTTGCCS 210
+I P N +S G CS
Sbjct: 187 SIV---PAGNASSCYGSCS 202
>gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 210
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/190 (53%), Positives = 139/190 (73%), Gaps = 2/190 (1%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGK 59
MA + D K+LL+GDSGVGK+ LL F D+F++ ++ TIGVDF +K +++ K
Sbjct: 1 MAVEMQEGSVDLTLKILLLGDSGVGKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYDK 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL +WDTAGQE+FRTLTS++YRGA+GII+VYDV+R DT +L + W +E+++Y T D
Sbjct: 61 RVKLTVWDTAGQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELEMYGTESD 120
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
++++V NKVD R VS EG DFAR +GCLF+E SAKT V V FEELVLKIL+TP
Sbjct: 121 AVRMVVANKVDVGEARRVSWHEGSDFARRHGCLFVETSAKTNVAVANAFEELVLKILETP 180
Query: 180 SLLSE-GSSG 188
SLL + G +G
Sbjct: 181 SLLEDVGGAG 190
>gi|149634680|ref|XP_001506607.1| PREDICTED: ras-related protein Rab-18-like [Ornithorhynchus
anatinus]
Length = 206
Score = 210 bits (535), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|126341216|ref|XP_001367066.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 205
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 107/169 (63%), Positives = 132/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLSELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|327271994|ref|XP_003220771.1| PREDICTED: ras-related protein Rab-18-like [Anolis carolinensis]
Length = 205
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 136/180 (75%), Gaps = 5/180 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFAKL-DNWLTELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS--GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNRGVK 186
>gi|156388137|ref|XP_001634558.1| predicted protein [Nematostella vectensis]
gi|156221642|gb|EDO42495.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L++G+SGVGKS+LLL FT DTF+ ++ TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYD R+TF L + W E+++YST +D +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDTNSRETFDKLEE-WLNEVEMYSTKKDIVKMLVGNKIDK- 126
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSSGVKK 191
+ R V +K+G+ FAR + LF+E SA+T+ V+ FEELV KI+ TP L +E SSG++
Sbjct: 127 NNREVDRKQGLQFARRHSMLFIEASARTKEGVQLAFEELVEKIIQTPGLWENEKSSGMR- 185
Query: 192 NIFKESPPQNDASTTGCCS 210
PQ +G CS
Sbjct: 186 --LTSGGPQTVEGCSGYCS 202
>gi|291401957|ref|XP_002717338.1| PREDICTED: RAB18, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 206
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 138/198 (69%), Gaps = 3/198 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L +
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESETQNKGVK 186
Query: 193 IFKESPPQNDASTTGCCS 210
+ + +G CS
Sbjct: 187 LSHREEGHGAGACSGYCS 204
>gi|395827177|ref|XP_003786782.1| PREDICTED: ras-related protein Rab-18 [Otolemur garnettii]
Length = 206
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|387017928|gb|AFJ51082.1| ras-related protein Rab-18-like [Crotalus adamanteus]
Length = 205
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 137/180 (76%), Gaps = 5/180 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT +TF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTFT L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFTKL-DNWLTELETYCTRYDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS--GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNRGVK 186
>gi|354473456|ref|XP_003498951.1| PREDICTED: ras-related protein Rab-18-like [Cricetulus griseus]
gi|344249075|gb|EGW05179.1| Ras-related protein Rab-18 [Cricetulus griseus]
Length = 206
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 145/200 (72%), Gaps = 7/200 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
+ +ES + G CS
Sbjct: 187 LSHREES--HGGGACGGYCS 204
>gi|410963376|ref|XP_003988241.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Felis catus]
Length = 206
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/185 (60%), Positives = 138/185 (74%), Gaps = 4/185 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSSGVKK 191
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + K
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 192 NIFKE 196
I +E
Sbjct: 187 LIHRE 191
>gi|60223069|ref|NP_001012486.1| ras-related protein Rab-18 [Rattus norvegicus]
gi|81909560|sp|Q5EB77.1|RAB18_RAT RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|59808259|gb|AAH89957.1| RAB18, member RAS oncogene family [Rattus norvegicus]
Length = 206
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCC 209
+ P+ ++ G C
Sbjct: 187 LS------PREESHGGGAC 199
>gi|355714854|gb|AES05139.1| RAB18, member RAS oncoprotein family [Mustela putorius furo]
Length = 205
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|301788416|ref|XP_002929624.1| PREDICTED: ras-related protein Rab-18-like [Ailuropoda melanoleuca]
Length = 206
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|115495023|ref|NP_001068967.1| ras-related protein Rab-18 [Bos taurus]
gi|335296519|ref|XP_003357800.1| PREDICTED: ras-related protein Rab-18-like [Sus scrofa]
gi|426240891|ref|XP_004014327.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Ovis aries]
gi|122142144|sp|Q0IIG8.1|RAB18_BOVIN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|113911817|gb|AAI22651.1| RAB18, member RAS oncogene family [Bos taurus]
gi|296481383|tpg|DAA23498.1| TPA: ras-related protein Rab-18 [Bos taurus]
gi|385281370|gb|AFI57837.1| ras-related protein Rab-18 [Capra hircus]
Length = 206
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|30841008|ref|NP_851415.1| ras-related protein Rab-18 [Mus musculus]
gi|1710017|sp|P35293.2|RAB18_MOUSE RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|388325|gb|AAC37632.1| Rab18 [Mus musculus]
gi|515041|emb|CAA56583.1| rab18 [Mus musculus]
gi|26337433|dbj|BAC32402.1| unnamed protein product [Mus musculus]
gi|33604086|gb|AAH56351.1| RAB18, member RAS oncogene family [Mus musculus]
gi|74138639|dbj|BAE27140.1| unnamed protein product [Mus musculus]
gi|74150708|dbj|BAE25489.1| unnamed protein product [Mus musculus]
gi|74183892|dbj|BAE24512.1| unnamed protein product [Mus musculus]
gi|74191971|dbj|BAE32926.1| unnamed protein product [Mus musculus]
gi|74222309|dbj|BAE26955.1| unnamed protein product [Mus musculus]
gi|112292993|dbj|BAF02874.1| Rab18 [Mus musculus]
gi|148691081|gb|EDL23028.1| RAB18, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 206
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 146/200 (73%), Gaps = 7/200 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
+ +ES + + G CS
Sbjct: 187 LSHREES--RGGGACGGYCS 204
>gi|335775453|gb|AEH58577.1| Ras-related protein Rab-18-like protein [Equus caballus]
Length = 206
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|344277582|ref|XP_003410579.1| PREDICTED: ras-related protein Rab-18-like [Loxodonta africana]
Length = 206
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFLKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|45592944|ref|NP_996661.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|40807131|gb|AAH65318.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|157422871|gb|AAI53661.1| RAB18A, member RAS oncogene family [Danio rerio]
Length = 205
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 133/169 (78%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ E+ TIGVDFK+K +A+ G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+RR+TF L D W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSRRETFAKL-DNWLSELETYCTRNDLVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+R + ++EG+ FAR++ LF+E SAKTR V+ FEELV KIL TP L
Sbjct: 128 -DREIEREEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKILQTPGL 175
>gi|10880989|ref|NP_067075.1| ras-related protein Rab-18 isoform 1 [Homo sapiens]
gi|197102556|ref|NP_001127616.1| ras-related protein Rab-18 [Pongo abelii]
gi|388452921|ref|NP_001253719.1| RAB18, member RAS oncogene family [Macaca mulatta]
gi|332240536|ref|XP_003269443.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Nomascus
leucogenys]
gi|332833815|ref|XP_003312545.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan troglodytes]
gi|397501611|ref|XP_003821474.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan paniscus]
gi|397501613|ref|XP_003821475.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan paniscus]
gi|402879861|ref|XP_003903543.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Papio anubis]
gi|403295005|ref|XP_003938447.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410043688|ref|XP_003951660.1| PREDICTED: ras-related protein Rab-18 [Pan troglodytes]
gi|426364298|ref|XP_004049255.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Gorilla gorilla
gorilla]
gi|12230528|sp|Q9NP72.1|RAB18_HUMAN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|75070476|sp|Q5R5H5.1|RAB18_PONAB RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|7381201|gb|AAF61433.1|AF137372_1 ras-related protein RAB18 [Homo sapiens]
gi|12239330|gb|AAG49435.1|AF136974_1 ras-related protein 18 [Homo sapiens]
gi|20379076|gb|AAM21098.1|AF498950_1 small GTP binding protein RAB18 [Homo sapiens]
gi|33150584|gb|AAP97170.1|AF087860_1 rab18 [Homo sapiens]
gi|7531023|emb|CAB86486.1| ras-related small GTPase RAB18 [Homo sapiens]
gi|12052987|emb|CAB66668.1| hypothetical protein [Homo sapiens]
gi|15929113|gb|AAH15014.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|20809384|gb|AAH29350.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|32880023|gb|AAP88842.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|49065336|emb|CAG38486.1| RAB18 [Homo sapiens]
gi|55732582|emb|CAH92991.1| hypothetical protein [Pongo abelii]
gi|61360907|gb|AAX41949.1| RAB18 member RAS oncogene family [synthetic construct]
gi|61360911|gb|AAX41950.1| RAB18 member RAS oncogene family [synthetic construct]
gi|90076230|dbj|BAE87795.1| unnamed protein product [Macaca fascicularis]
gi|90086345|dbj|BAE91725.1| unnamed protein product [Macaca fascicularis]
gi|117645108|emb|CAL38020.1| hypothetical protein [synthetic construct]
gi|119606460|gb|EAW86054.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606461|gb|EAW86055.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193786050|dbj|BAG50939.1| unnamed protein product [Homo sapiens]
gi|208967232|dbj|BAG73630.1| RAB18, member RAS oncogene family [synthetic construct]
gi|380810740|gb|AFE77245.1| ras-related protein Rab-18 [Macaca mulatta]
gi|383411947|gb|AFH29187.1| ras-related protein Rab-18 [Macaca mulatta]
gi|384945898|gb|AFI36554.1| ras-related protein Rab-18 [Macaca mulatta]
gi|410209604|gb|JAA02021.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410260764|gb|JAA18348.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410305300|gb|JAA31250.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410332701|gb|JAA35297.1| RAB18, member RAS oncogene family [Pan troglodytes]
Length = 206
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|317419712|emb|CBN81748.1| Ras-related protein Rab-18 [Dicentrarchus labrax]
Length = 204
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 110/198 (55%), Positives = 139/198 (70%), Gaps = 5/198 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ E + TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRR+TF L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFAKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ + + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L S G
Sbjct: 128 NHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSESHGRGVQ 186
Query: 193 IFKESPPQNDASTTGCCS 210
+ E S +G CS
Sbjct: 187 LTDEDA--GGGSCSGYCS 202
>gi|417397093|gb|JAA45580.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 206
Score = 209 bits (532), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRSEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|296206366|ref|XP_002750219.1| PREDICTED: uncharacterized protein LOC100402013 isoform 1
[Callithrix jacchus]
Length = 206
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 143/199 (71%), Gaps = 11/199 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCC 209
+ P+ + G C
Sbjct: 187 LS------PREECHGGGAC 199
>gi|343172008|gb|AEL98708.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/109 (89%), Positives = 106/109 (97%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
EFDYLFKLL+IGDSGVGKS+LLLSFTSDTFE+LSPTIGVDFK+K+V +GGKK+KLAIWDT
Sbjct: 2 EFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDT 61
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL +WAKEIDLYSTN
Sbjct: 62 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRGVWAKEIDLYSTN 110
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 107/196 (54%), Positives = 137/196 (69%), Gaps = 8/196 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F DTF+ E+S TIGVDF++ + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDTFDPEISATIGVDFRVTSRTVDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L D W E+D YST + IK+LVGNK+DK
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTNRCSFERL-DHWMNEVDTYSTKNNAIKMLVGNKIDKT 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
S RV++++EG+ FA+ + LF+E SAKTR V+ FEEL+ K++ TP L SG
Sbjct: 131 S-RVITREEGLQFAKRHRMLFIEASAKTREGVQCAFEELIEKVIQTPGLWESDRSG---- 185
Query: 193 IFKESPPQNDASTTGC 208
F DA T GC
Sbjct: 186 -FALGTANQDAGTCGC 200
>gi|62897867|dbj|BAD96873.1| RAB18, member RAS oncogene family variant [Homo sapiens]
Length = 206
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 105/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLALWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ + + TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTLTVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRR+TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+ V K EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L G
Sbjct: 128 NHE-VEKPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 182
>gi|198429489|ref|XP_002131370.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 2
[Ciona intestinalis]
gi|198429491|ref|XP_002131333.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 1
[Ciona intestinalis]
Length = 200
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 134/169 (79%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IGDSGVGKS+LLL FT D F+ + S TIGVDFK+K + + G +KLAIWDTAGQE
Sbjct: 9 LKILIIGDSGVGKSSLLLRFTDDRFDPDQSATIGVDFKVKSLTVEGNTVKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYD TR+D+F++L+ W E++ YST + +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVIFVYDCTRKDSFSHLS-TWLTEVETYSTKPNIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ RVV+++EG+ FAR++ LF+E SAKTR VE FEELV KI+ TP L
Sbjct: 128 N-RVVTREEGLKFARKHSMLFIEASAKTRDGVECAFEELVEKIIQTPGL 175
>gi|83753568|pdb|1X3S|A Chain A, Crystal Structure Of Human Rab18 In Complex With Gppnhp
Length = 195
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 130/169 (76%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 16 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 75
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + LVGNK+DKE
Sbjct: 76 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNXLVGNKIDKE 134
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 135 N-REVDRNEGLKFARKHSXLFIEASAKTCDGVQCAFEELVEKIIQTPGL 182
>gi|294931937|ref|XP_002780061.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
gi|239889905|gb|EER11856.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/174 (59%), Positives = 137/174 (78%), Gaps = 2/174 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLL+IGDSGVGKS LLL F D F + TIGVDFK+K+++ GK++KLAIWDT
Sbjct: 6 YDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYISSMGKRLKLAIWDT 65
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLTSSYYRGAQGI++VYDV R++F NL + W +E+ Y+T++ +K+LV NK
Sbjct: 66 AGQERFRTLTSSYYRGAQGIVLVYDVNSRESFENL-EYWLEEVRKYATSRSSVKMLVANK 124
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
VD+ + V+++EG FA E+ LF+E SAK +V V++ F++LVLKILDTP LL
Sbjct: 125 VDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLL 178
>gi|118102871|ref|XP_423284.2| PREDICTED: ras-related protein Rab-18-B-like [Gallus gallus]
Length = 204
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/198 (54%), Positives = 141/198 (71%), Gaps = 8/198 (4%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQER 73
KL+LIGDS VGKS+LLL F +FE L PTI VDFK+K + + G ++LAIWDTAGQER
Sbjct: 9 KLILIGDSAVGKSSLLLRFAEGSFEPSLKPTICVDFKVKKMVVDGHTVQLAIWDTAGQER 68
Query: 74 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKES 133
FRTL SYYRG QGI++VYDVTR+DTFT L D W E+++Y+T + +K+LVGNK DK
Sbjct: 69 FRTLNPSYYRGTQGIVLVYDVTRKDTFTGL-DSWLNELEIYNTKSNTVKMLVGNKTDK-P 126
Query: 134 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS--SGVKK 191
+R V ++EG+ FA++ LF+E SAKT V+ FEELV+KIL TP+LL + + GV+
Sbjct: 127 DREVERREGLQFAKKRSLLFIETSAKTEDGVQHAFEELVIKILQTPNLLDKSTKKQGVQ- 185
Query: 192 NIFKESPPQNDASTTGCC 209
KES Q ++ T C
Sbjct: 186 --LKESSQQEKSTCTAYC 201
>gi|405970601|gb|EKC35494.1| Ras-related protein Rab-18-B [Crassostrea gigas]
Length = 203
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/177 (59%), Positives = 134/177 (75%), Gaps = 3/177 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+S VGKS+LLL FT DTF+ E + TIGVDFK+K + + G + KLAIWDTAGQE
Sbjct: 10 LKILIIGESSVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTLQVDGNRAKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG I+VYDVT R +F L D+W E++ +ST D IK+LVGNK+D+E
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVTNRASFQKL-DVWLNELETFSTKHDLIKMLVGNKIDQE 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
+ R VSK++G+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L + GV
Sbjct: 129 N-REVSKEDGLKFARKHHMLFIEASAKTREGVQCAFEELVEKIIQTPGLWETSNRGV 184
>gi|410933133|ref|XP_003979946.1| PREDICTED: ras-related protein Rab-18-like isoform 1 [Takifugu
rubripes]
Length = 204
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ + + TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTR++TFT L D W E++ Y T D +K+LVGNK+D+E
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDRE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L G
Sbjct: 128 N-REVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQSEKHG 182
>gi|149016250|gb|EDL75496.1| rCG62892 [Rattus norvegicus]
Length = 206
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 111/187 (59%), Positives = 140/187 (74%), Gaps = 5/187 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG SGVGKS+LLL FT +TF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGKSGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L + W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKLYN-WLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKES 197
+ +ES
Sbjct: 187 LSPREES 193
>gi|329756970|gb|AEC04741.1| rab18 [Oryza sativa]
Length = 246
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 98/171 (57%), Positives = 128/171 (74%), Gaps = 1/171 (0%)
Query: 39 EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRD 98
+E+ PT+GVD K K V GKK K IW+ AGQER R SSY RGA +I VYDVT+R+
Sbjct: 4 DEMPPTVGVDCKYKSVRCNGKKRKRTIWEPAGQERCRGGPSSYDRGADAMIAVYDVTKRE 63
Query: 99 TFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSA 158
+ N+AD+WAKEI++ +TN++C K+LVGNKVDK ER+V+++EG+ FA+E GCLFLE SA
Sbjct: 64 SVANVADVWAKEIEVLATNKECDKMLVGNKVDKNEERMVTREEGLAFAQEAGCLFLESSA 123
Query: 159 KTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
KTR NVE+CFEEL +K +++PSLL EGSS K+N K+ +N A GCC
Sbjct: 124 KTRENVEKCFEELAVKYVESPSLLEEGSSVCKRNALKQK-HENKAKNGGCC 173
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 205 bits (522), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT D F+ + S TIGVDFK+K + + G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+R +SK+EG AR++ +F+E SAKTR V+ FEELV I+ TP L
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPEL 177
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 101/169 (59%), Positives = 129/169 (76%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+SGVGKS+LLL FT D F+ + S TIGVDFK+K + + G ++KLAIWDTAGQE
Sbjct: 10 LKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+TN D +K+LVGNK D E
Sbjct: 70 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDLE 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+R +SK+EG AR++ +F+E SAKTR V+ FEELV I+ TP L
Sbjct: 129 EKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPEL 177
>gi|443683130|gb|ELT87498.1| hypothetical protein CAPTEDRAFT_21334 [Capitella teleta]
gi|443728770|gb|ELU14963.1| hypothetical protein CAPTEDRAFT_21450 [Capitella teleta]
Length = 204
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 110/197 (55%), Positives = 136/197 (69%), Gaps = 10/197 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG++GVGKS+LLL FT DTF+ E S TIGVDFK+K + + G + KLAIWDTAGQE
Sbjct: 10 LKLLIIGETGVGKSSLLLRFTDDTFDPEQSATIGVDFKVKTIQVDGNRAKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG I+VYDV + +F L D W E++ +ST D +K+LVGNK+DKE
Sbjct: 70 RFRTLTPSYYRGAQGCILVYDVCSQASFAKL-DNWLNELETFSTKHDIVKMLVGNKIDKE 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
R VS++EG+ FAR Y LF+E SAKT+ V+ FEELV KIL TP L G+
Sbjct: 129 P-REVSREEGLKFARRYHMLFIEASAKTKEGVQCAFEELVEKILQTPGLWETDQRGL--- 184
Query: 193 IFKESPPQNDASTTGCC 209
S +ND S C
Sbjct: 185 ----SIGRNDQSAAAGC 197
>gi|260794026|ref|XP_002592011.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
gi|229277224|gb|EEN48022.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
Length = 213
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 133/176 (75%), Gaps = 9/176 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ E++ TIGVDFK+K + + G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPEIAATIGVDFKVKTLTVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+ R++F L + W E++ +ST QD +K+LVGNK+DK
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVSSRNSFNRL-EQWLSELETFSTKQDIVKMLVGNKIDKA 127
Query: 133 S-------ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
S ++ V + EG+ FAR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 128 STLSSVQDKKEVDRNEGLKFARKHQMLFIEASAKTREGVQCAFEELVEKIIQTPGL 183
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 113/206 (54%), Positives = 140/206 (67%), Gaps = 19/206 (9%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALG 57
M++ S Q L KLLLIG+S VGKS+LLL FT D F EE + TIGVDFK+K V +
Sbjct: 1 MSADPSPQPPSNL-KLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVD 59
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
G++ KL+IWDTAGQERFRTLTSSYYRGAQG+I+VYDVT+R+TF L W +EID Y
Sbjct: 60 GRRYKLSIWDTAGQERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIK-WFREIDTYCA- 117
Query: 118 QDCIKLLVGNKVDK-------------ESERVVSKKEGIDFAREYGCLFLECSAKTRVNV 164
+D +K++VGNKVDK E R V+ +EG FA G LF+ECSAKTRV V
Sbjct: 118 EDVVKIIVGNKVDKVTLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGV 177
Query: 165 EQCFEELVLKILDTPSLLSEGSSGVK 190
F+ LV +IL+TPSL + G V+
Sbjct: 178 NDAFQVLVRRILETPSLWTRGPQPVR 203
>gi|296531381|ref|NP_001171837.1| ras-related protein Rab-18-like [Saccoglossus kowalevskii]
Length = 207
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/176 (56%), Positives = 132/176 (75%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ P TIGVDFK+K +++ G KLAIWDTAGQE
Sbjct: 11 LKILIIGESGVGKSSLLLRFTDDTFDPEQPATIGVDFKVKTLSVEGNTTKLAIWDTAGQE 70
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDV+ R +F L D+W E++ +ST D +K+LVGNK+D +
Sbjct: 71 RFRTLTPSYYRGAQGVILVYDVSNRKSFQKL-DMWLNELETFSTKSDIVKMLVGNKIDMD 129
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+R V ++EG+ FAR++ LF+E SAKT+ V+ FEELV K++ TP L S G
Sbjct: 130 -KREVDRQEGLKFARKHAMLFIEASAKTKEGVQVAFEELVEKVIQTPGLWENDSRG 184
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 112/206 (54%), Positives = 141/206 (68%), Gaps = 19/206 (9%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALG 57
M++ S Q L KLLLIG+S VGKS+LLL FT D F EE + TIGVDFK+K V +
Sbjct: 1 MSADPSPQPPSNL-KLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVD 59
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
G++ KL+IWDTAGQERFRTLTSSYYRGAQG+I+VYDV++R+TF L W +EI+ Y
Sbjct: 60 GRRYKLSIWDTAGQERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIK-WFREIETYCA- 117
Query: 118 QDCIKLLVGNKVDK-------------ESERVVSKKEGIDFAREYGCLFLECSAKTRVNV 164
+D +K++VGNKVDK E R V+ +EG FA G LF+ECSAKTRV V
Sbjct: 118 EDVVKIIVGNKVDKVTLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGV 177
Query: 165 EQCFEELVLKILDTPSLLSEGSSGVK 190
F+ELV +IL+TPSL + G V+
Sbjct: 178 NDAFQELVRRILETPSLWTRGPQPVR 203
>gi|290997916|ref|XP_002681527.1| rab family small GTPase [Naegleria gruberi]
gi|284095151|gb|EFC48783.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 144/199 (72%), Gaps = 10/199 (5%)
Query: 18 LIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRT 76
L+GDS GKS+++ FT D F E++SPTIGVDFK+K + + KK+KL I+DTAGQERFRT
Sbjct: 1 LVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGQERFRT 60
Query: 77 LTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERV 136
LTSSYYR A GII+VYDVTR +TF N+ + W KE DLYST ++C+KLL+GNK+D + ER
Sbjct: 61 LTSSYYRNAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLIGNKIDLKEERK 119
Query: 137 VSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKK----- 191
VS ++ +FA+ +++E SAKT+ NV++ FEE+V +IL+T +LL E + V+
Sbjct: 120 VSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLL-ESTEPVRNKPTDN 178
Query: 192 -NIFKESPPQNDASTTGCC 209
NI P +++ +GCC
Sbjct: 179 VNISTSEPNESEGG-SGCC 196
>gi|327275917|ref|XP_003222718.1| PREDICTED: ras-related protein Rab-18-B-like [Anolis carolinensis]
Length = 212
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/178 (56%), Positives = 132/178 (74%), Gaps = 4/178 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEEL-SPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLLLIGDSGVGKS+LLL FT D FE PTIGVDFKIK V +G +++AIWDTAGQE
Sbjct: 17 LKLLLIGDSGVGKSSLLLRFTEDQFEPYRKPTIGVDFKIKKVIVGDLPLQVAIWDTAGQE 76
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQGII+VYDVTRR+TF L W +E++++ T ++ +K+LVGNK+D E
Sbjct: 77 RFRTLTPSYYRGAQGIILVYDVTRRETFLGLES-WLQELEVF-TKKEVVKILVGNKID-E 133
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
+ V ++EG+ FAR + LF E SAK + V+ F+E+V++IL TP L + G++
Sbjct: 134 TRHEVERREGLRFARRHSLLFAEASAKMKYGVQNIFDEVVIRILQTPGLWNIKRQGLR 191
>gi|353239644|emb|CCA71547.1| probable Ras-related protein Rab-18 [Piriformospora indica DSM
11827]
Length = 218
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/179 (56%), Positives = 130/179 (72%), Gaps = 5/179 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
KLLLIG+S VGKS+LL+ FT F +E S TIGVDF++ + +GG+++KL+IWDTAG
Sbjct: 10 LKLLLIGNSSVGKSSLLMRFTDAQFLPEDESSATIGVDFRVCKMEIGGRRVKLSIWDTAG 69
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRT+TSSYYRGAQGII+ YD++ R+TF L W E+D Y T +K+LVGNK+D
Sbjct: 70 QERFRTITSSYYRGAQGIIVAYDISNRETFDALPR-WFTELDTYVT-PSVVKMLVGNKLD 127
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
KE R VS+ EG FA+ GCLFLE SAKT V V + F+ELV KILDTP L + + +
Sbjct: 128 KEFSRAVSEDEGRKFAQRNGCLFLEASAKTNVGVREAFQELVEKILDTPELWAPAAPRI 186
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 128/174 (73%), Gaps = 2/174 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
KLL+IG+S VGKS+L L FT D F+ E S TIGVDFK+K + + G ++KLAIWDTAGQE
Sbjct: 12 LKLLIIGESCVGKSSLQLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRG QG I+VYDVT RD+F+N+ + W E+D Y+T D +K+LVGNK D E
Sbjct: 72 RFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATIHDIVKMLVGNKCDLE 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
+RV+SK+EG AR++ +F+E SAKTR V+ FEELV I+ TP L S
Sbjct: 131 EKRVISKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEASS 184
>gi|351712339|gb|EHB15258.1| Ras-related protein Rab-18 [Heterocephalus glaber]
Length = 205
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/169 (61%), Positives = 130/169 (76%), Gaps = 4/169 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+ +AKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFI-GNAKTCDGVQCAFEELVEKIIQTPGL 174
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 111/207 (53%), Positives = 139/207 (67%), Gaps = 10/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 9 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 68
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +EID Y+T ++ KLLVGN
Sbjct: 69 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGN 126
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL----KILDTPSLLS 183
K D S++VV+ EG + A + G FLE SAK NVEQ F E+ ++ TP
Sbjct: 127 KSDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSR 186
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
G+ G + + P + + +GCCS
Sbjct: 187 SGAGGPAR--LRPGQPAH-GNQSGCCS 210
>gi|328770926|gb|EGF80967.1| hypothetical protein BATDEDRAFT_11061 [Batrachochytrium
dendrobatidis JAM81]
Length = 227
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 109/215 (50%), Positives = 143/215 (66%), Gaps = 8/215 (3%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGG 58
++ S ++ FKLLLIGDSG GKS+LLL FT D + +E+S TIGVDFK+K + +
Sbjct: 14 GTTVSDRDIVSTFKLLLIGDSGTGKSSLLLQFTDDLWLQPDEVSATIGVDFKVKVIDIDS 73
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLY-STN 117
KK KL IWDTAGQERFRTLTSSYYRGAQG+I+VYDV+ R +F +L W E+D Y S+N
Sbjct: 74 KKYKLTIWDTAGQERFRTLTSSYYRGAQGVILVYDVSNRGSFDHL-QTWFNELDTYTSSN 132
Query: 118 QDCIKLLVGNKVDKE--SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
+K++VGNK DK+ R V +KEG FA++ G LF+E SAKT + V F E+V +I
Sbjct: 133 NSVVKIIVGNKSDKDVSGGREVPRKEGEAFAKKMGTLFIETSAKTTMGVRDAFVEVVRRI 192
Query: 176 LDTPSLLSEGSSGVKK-NIFKESPPQNDASTTGCC 209
+DTPSL SG + N+ + DA + C
Sbjct: 193 IDTPSLWQRNQSGSRTGNVTLAAGTSADAQSYCSC 227
>gi|241068895|ref|XP_002408522.1| RAB-18, putative [Ixodes scapularis]
gi|215492508|gb|EEC02149.1| RAB-18, putative [Ixodes scapularis]
Length = 201
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 127/169 (75%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+S VGKS+LLL FT D F+ L+ TIGVDFK+K V + G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPSLAATIGVDFKVKTVTVDGNKAKLAIWDTAGSE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG I+VYDV+ +TF L D W E++ Y T + +K+LVGNK+D+
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVSNHNTFLKL-DHWLAELETYCTRSNVVKMLVGNKIDRH 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
RVVSK++G+++AR++ LF+E SAKT+ V+ FEELV KI+ TP L
Sbjct: 129 ESRVVSKEQGMNYARKHSMLFIEASAKTKDGVQCAFEELVEKIIQTPGL 177
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 136/204 (66%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +EID Y+T ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D S++VV+ EG + A + G FLE SAK NVEQ F E+ +I +
Sbjct: 122 KTDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQPNR 181
Query: 187 SGVKKNIFKESPPQNDASTTGCCS 210
SG + P + + +GCCS
Sbjct: 182 SGAGAARLRPGQPAH-GNQSGCCS 204
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 129/169 (76%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+ G+SGVGKS+LLL FT DTF+ E + TIGVDFK+K + + G +KLAIWDTAGQE
Sbjct: 9 LKILITGESGVGKSSLLLRFTDDTFDNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYR AQG I+VYDV R +F+ L D W E++ Y+TN + +K+L+GNK+DKE
Sbjct: 69 RFRTLTPSYYRNAQGAILVYDVCSRQSFSRL-DAWFDELETYATNTNIVKMLIGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
R VS++EG+ FA+++ LF+E SAKT+ V+ FEELV KI+ TP L
Sbjct: 128 -RREVSREEGLKFAKKHSMLFIEASAKTKDGVQMAFEELVQKIIQTPGL 175
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 137/201 (68%), Gaps = 5/201 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
+ D K+L+IGDS GKS LL+ FT DTF+E + PTIGVDFK K + L G+++KL +WD
Sbjct: 3 DVDAELKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWD 62
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQ+RF+TLT+SYYRGA G+I+VYDVTRR TF ++ W E ++Y + + +K+LV N
Sbjct: 63 TAGQDRFKTLTASYYRGAHGVILVYDVTRRATFEHIIP-WLNEANVYC-DDNVVKMLVAN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K+D+ R VS EG ARE LF+ECSAKT+V V+Q FEEL ++LDTP L SS
Sbjct: 121 KIDE--PRQVSTDEGRALAREKNMLFIECSAKTKVGVQQAFEELAQQVLDTPELYQSPSS 178
Query: 188 GVKKNIFKESPPQNDASTTGC 208
G ++ S Q + GC
Sbjct: 179 GAGVDVSSSSSGQLNGDVCGC 199
>gi|312084876|ref|XP_003144454.1| rab family protein 18 [Loa loa]
gi|307760381|gb|EFO19615.1| Ras-like protein Rab-18 [Loa loa]
Length = 200
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L++G+SGVGKS+L+L F DTF+ E++ TIG+DF++ + + ++KLAIWDTAGQE
Sbjct: 11 LKILIVGESGVGKSSLMLRFVDDTFDPEIAATIGIDFRVTSMMVDQNRVKLAIWDTAGQE 70
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDV+ R TF L W E+D YST D +K+LVGNK+D
Sbjct: 71 RFRTLTPSYYRGAQGVICVYDVSNRQTFEKLGH-WMNEVDTYSTKMDAVKMLVGNKIDM- 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
S R V+++EG++FA++Y LF+E SAKTR V+ FEEL+ KIL TP L
Sbjct: 129 SNREVTREEGLEFAKKYRMLFIEASAKTREGVQCAFEELIEKILQTPGL 177
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 113/203 (55%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT RDTFTN+ W +EID Y+ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQ-WLQEIDRYAV-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS- 186
K D +++VV E FA E G FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASG 182
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
SG K I + GCC
Sbjct: 183 SGGKSTIKGLGQTVEQKTAGGCC 205
>gi|391341575|ref|XP_003745104.1| PREDICTED: ras-related protein Rab-18-like [Metaseiulus
occidentalis]
Length = 203
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 140/199 (70%), Gaps = 6/199 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG++ VGKS LLL F DTF+ +L+ TIG D K K + + K+KL++WDTAG E
Sbjct: 8 LKVLIIGEADVGKSCLLLRFVEDTFDTQLTSTIGFDHKSKVITVFDNKVKLSLWDTAGSE 67
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT+SYYRGAQG ++VYDVT R++F L D W E++ Y+T+++ +K+LVGNKVDK
Sbjct: 68 RFRTLTASYYRGAQGAVLVYDVTCRESFEKL-DSWLIELETYATHKNIVKMLVGNKVDKH 126
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+R V+K+EGI +AR + LF+E SA+T NV CFEELV KIL TP L ++ + ++N
Sbjct: 127 EQRQVTKQEGISYARRHQMLFVEASARTSENVTGCFEELVAKILHTPGLWTKKND--REN 184
Query: 193 IFKESPPQN--DASTTGCC 209
I P N D S G C
Sbjct: 185 ITLTDAPDNLGDGSVCGYC 203
>gi|281207535|gb|EFA81718.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 100/181 (55%), Positives = 135/181 (74%), Gaps = 4/181 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
+K+LLIGDS VGK++++ F DTF+E L TIGV+FK+K V + GK + L IWDTAGQE
Sbjct: 7 YKVLLIGDSDVGKTSIVKRFLDDTFDEDLLCTIGVEFKMKAVEVDGKSVTLCIWDTAGQE 66
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
+FR L SSYYRGA GII+ YDVT+R+TF NL W EI+ +S + +KLLVGNK+DKE
Sbjct: 67 KFRALISSYYRGAHGIILTYDVTKRETFKNL-QYWLNEIETFSNRANVVKLLVGNKIDKE 125
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R V+++EG++FA+ F+ECSAKT++ ++Q FEEL KI++TPS LSE + KK
Sbjct: 126 N-REVTREEGLEFAKSKAMFFIECSAKTKIGIQQAFEELAHKIIETPS-LSEDNENKKKK 183
Query: 193 I 193
I
Sbjct: 184 I 184
>gi|126326099|ref|XP_001363346.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 208
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/188 (55%), Positives = 133/188 (70%), Gaps = 5/188 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL T DTF+ +S TIGVDFK+K ++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRITDDTFDPNISATIGVDFKVKTISFDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT +YYRGAQG+I+VYDVTRRDTF L D W E++ + D K+LVGNK+DKE
Sbjct: 69 RFRTLTPNYYRGAQGVILVYDVTRRDTFVKL-DNWLIELNTHCMGNDITKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL--LSEGSSGVK 190
+ V + EG+ FAR++ LF+E SAKT V FEELV KI TP + + GV+
Sbjct: 128 NHE-VDRNEGLKFARKHSMLFIEVSAKTCDGVRCAFEELVEKIFQTPGVWEIKNQKKGVR 186
Query: 191 KNIFKESP 198
+ +ESP
Sbjct: 187 LSQNEESP 194
>gi|427787123|gb|JAA59013.1| Putative rab18a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 201
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 125/169 (73%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+S VGKS+LLL FT D F+ L+ TIGVDFK+K + + G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGSE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG I+VYDV TF L D W E++ Y T + +K+LVGNK+DK
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVCNYSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDKH 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
RVV+K++G+++AR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 129 ENRVVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 177
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S+RVV+ EG + A YG F+E SAK NVEQ F + +I L ++ +
Sbjct: 122 KCDLVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQLNNQNTK 181
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
GV + K + Q GCC+
Sbjct: 182 GVTQQGPKLAGAQ-PIRQGGCCA 203
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 136/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D ++R V + D+A + G FLE SAK+ NVEQ F + +I P + G
Sbjct: 125 KCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGG 184
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+ GV+ S P D ++GCC
Sbjct: 185 APGVR---ITGSQPVQDKKSSGCC 205
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 134/202 (66%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL +W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLK-VWLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I +T + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNT--VGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P S +GCC
Sbjct: 180 GASGQVKIDSTPVQSKSGSGCC 201
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 196 bits (498), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 136/207 (65%), Gaps = 11/207 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D S++VV + FA E G FLE SAK NVEQ F E+ ++ P+L S
Sbjct: 122 KSDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSS 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
N+ ++ PQ +GCCS
Sbjct: 182 TSKPNNVTNLRGQAIPQK----SGCCS 204
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 133/207 (64%), Gaps = 6/207 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 2 SAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT RDT+TN+ W +EID Y+ + KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLL 182
VGNK D +++VV E FA E G FLE SAK NVEQ F + +I D S +
Sbjct: 120 VGNKSDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTM 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ G G K I + GCC
Sbjct: 180 ASG-PGAKSTIKGLGQNVEQKTAGGCC 205
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 28 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 87
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 88 TAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 145
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + G FLE SAK NVEQ F + +I D G
Sbjct: 146 KSDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGASGTGGP 205
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N +++GCC
Sbjct: 206 TSKTNTITPGTGITTNTSSGCC 227
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 196 bits (497), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 134/198 (67%), Gaps = 3/198 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG++GVGKS+LLL FT D F+ E S TIGVDFKIK V + G ++KLAIWDTAGQE
Sbjct: 8 LKILIIGEAGVGKSSLLLRFTDDQFDPEQSATIGVDFKIKTVNVEGNRVKLAIWDTAGQE 67
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYD ++R +F L + W E+ Y T +D IK+LVGNK+DK+
Sbjct: 68 RFRTLTPSYYRGAQGVILVYDTSKRTSFDKLEN-WLTELRTYCTKRDVIKMLVGNKIDKD 126
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+R V G +FAR Y LF ECSAKT +V+ F+ELV KI+ TP L S
Sbjct: 127 -QREVDTLTGTNFARRYQMLFTECSAKTCDHVQDAFDELVHKIIQTPGLWDTEKSNSGLK 185
Query: 193 IFKESPPQNDASTTGCCS 210
I + +S G CS
Sbjct: 186 IGERDGEAKASSCYGGCS 203
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 133/207 (64%), Gaps = 6/207 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 2 SAPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT RDT+TN+ W +EID Y+ + KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLL 182
VGNK D +++VV E FA E G FLE SAK NVEQ F + +I D S +
Sbjct: 120 VGNKSDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTM 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ G G K I + GCC
Sbjct: 180 ASG-PGAKSTIKGLGQNVEQKTAGGCC 205
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D + + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+ N++ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVK-TWLHEIDRYA-NENVVKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VVS + +FA G F+E SAK NVE F + +I+ + + G
Sbjct: 122 KADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQKNASVQSGPK 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G K + P + GCC
Sbjct: 182 GAKPTVV---PSAAKKESKGCC 200
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 134/202 (66%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S+R V ++A + G FLE SAK+ NVEQ F + +I + + + +
Sbjct: 122 KCDLTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMGPVQQAGT 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G I S P N+ T GCC
Sbjct: 182 GPSVRI-GGSQPVNEKKTGGCC 202
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 138/209 (66%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S GS K N+ +S P +S+ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTPVK-SSSGGCC 205
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 195 bits (496), Expect = 9e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D ++R V + D+A + G FLE SAK+ NVEQ F + +I P + G
Sbjct: 124 KCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGG 183
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+ GV+ S P D + GCC
Sbjct: 184 APGVR---ITGSQPVQDKKSGGCC 204
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK+ NVEQ F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P N S+ GCC
Sbjct: 182 AEKSNVKIQSKPVN-TSSGGCC 202
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D ++R V + D+A + G FLE SAK+ NVEQ F + +I P + G
Sbjct: 125 KCDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGG 184
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+ GV+ S P D + GCC
Sbjct: 185 APGVR---ITGSQPVQDKKSGGCC 205
>gi|402587142|gb|EJW81078.1| member Ras oncogene family RAB18A [Wuchereria bancrofti]
Length = 200
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F DTF+ E++ TIGVDF++ + + ++KLAIWDTAGQE
Sbjct: 11 LKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTTMMVDQNRVKLAIWDTAGQE 70
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDV+ R TF L+ W E+D YST D +K+L+GNK+D
Sbjct: 71 RFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI- 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
S R V+++EG+ FA+++ LF+E SAKTR V+ FEEL+ K+L TP L
Sbjct: 129 SNREVTREEGLQFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGL 177
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK+ NVEQ F + +I + +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P N S+ GCC
Sbjct: 182 SEKSNVKIQSKPVN-TSSGGCC 202
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV DFA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTSKKVVEYSVAKDFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTASG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + ++ GCC
Sbjct: 183 PGKTSTVTPGQSVQQQASGGCC 204
>gi|328861035|gb|EGG10139.1| hypothetical protein MELLADRAFT_71064 [Melampsora larici-populina
98AG31]
Length = 228
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 141/206 (68%), Gaps = 10/206 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
KLLLIG S VGKS+LLL FT + F EE S TIGVDFK+K ++ GK+ KL+IWDTAG
Sbjct: 23 LKLLLIGSSSVGKSSLLLRFTDEVFLSAEEASATIGVDFKVKLMSRRGKRYKLSIWDTAG 82
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYS-TNQDCIKLLVGNKV 129
QERFRTLTSSYYRGAQG+++VYDVT R++F +L W E+D ++ + +D ++++VGNK
Sbjct: 83 QERFRTLTSSYYRGAQGVVLVYDVTSRESFESLPS-WFSELDTFTHSPRDVVRIVVGNKT 141
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
DK+ R VS +EG FA + LF+E SAKT VE+ FE +V KI+DTPSL ++G +
Sbjct: 142 DKDYSREVSIEEGRAFAADNNALFVETSAKTMRGVEEVFEAVVDKIIDTPSLHNKGLNLR 201
Query: 190 KKNIFKESP-----PQNDASTTGCCS 210
N P +DA +G C+
Sbjct: 202 SNNRLATLPGTITLDDDDAEESGWCN 227
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 110/207 (53%), Positives = 136/207 (65%), Gaps = 12/207 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEINRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D + RVVS + G DFA G FLE SAK NVE+ F E+ ++ P+L +
Sbjct: 122 KCDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNT 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
S V + PP+ TGCCS
Sbjct: 182 GKSGTVNVGGSQPIPPK-----TGCCS 203
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 109/205 (53%), Positives = 137/205 (66%), Gaps = 9/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +++VV ++A + G FLE SAK NVEQ F + +I + PS S+
Sbjct: 122 KCDLSTKKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPSAPSD 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
G G+ NI S P + S +GCC
Sbjct: 182 GVGGI--NINSSSRPV-EQSKSGCC 203
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 129/186 (69%), Gaps = 7/186 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS+LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D E +RVVS ++G +FA G FLE SAKT NVEQ F ++ ++ + PS
Sbjct: 122 KCDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAP 181
Query: 184 EGSSGV 189
GV
Sbjct: 182 ATKPGV 187
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 138/209 (66%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GI++VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S GS K N+ +S P +S+ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTPVK-SSSGGCC 205
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 135/203 (66%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ ++L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S+RVV+ EG + A +G F+E SAK NVEQ F + +I + S+ +
Sbjct: 122 KCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNSQNTR 181
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
G + K + Q GCCS
Sbjct: 182 GSAQQGPKLAGAQ-PIRQGGCCS 203
>gi|374081854|ref|NP_001243339.1| ras-related protein Rab-18 isoform 2 [Homo sapiens]
gi|332240538|ref|XP_003269444.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Nomascus
leucogenys]
gi|332833817|ref|XP_507716.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan troglodytes]
gi|397501615|ref|XP_003821476.1| PREDICTED: ras-related protein Rab-18 isoform 3 [Pan paniscus]
gi|51599149|gb|AAU08232.1| RAB18 long isoform 1 [Homo sapiens]
Length = 235
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 131/198 (66%), Gaps = 32/198 (16%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW------ 66
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQ 68
Query: 67 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 103
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TANFFLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 104 ADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVN 163
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 164 VEQCFEELVLKILDTPSL 181
V+ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|167521531|ref|XP_001745104.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776718|gb|EDQ90337.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 129/172 (75%), Gaps = 4/172 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FK+L+IGDS GKS+LL++FT TF+E + PTIGVDFK K + L G K+ L +WDTAGQE
Sbjct: 9 FKVLIIGDSNCGKSSLLMAFTEGTFDESIGPTIGVDFKQKSLMLDGNKVNLTLWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT+SYYRGA +I++YDV+R +TF ++ D+W E+++Y + +KLL+ NK+D
Sbjct: 69 RFRTLTASYYRGAHAVILLYDVSRPETFEHI-DMWLNEVNVYCPEKKIVKLLIANKID-- 125
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
ER VS + G DFAR+ +F+ECSAKT+ V+Q FEEL K+LDTP L ++
Sbjct: 126 LERRVSTEVGRDFARDKQMMFIECSAKTKAGVQQAFEELAQKVLDTPELWNK 177
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 133/202 (65%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VV +FA G FLE SAK+ NVEQ F + +I + +
Sbjct: 122 KCDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P N S GCC
Sbjct: 182 AEKSNVKIQSKPVN-PSPGGCC 202
>gi|308477314|ref|XP_003100871.1| CRE-RAB-18 protein [Caenorhabditis remanei]
gi|308264445|gb|EFP08398.1| CRE-RAB-18 protein [Caenorhabditis remanei]
Length = 202
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/169 (56%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ +A+ G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L + W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMTEVDTYCTNDNIIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ RVVS++EG+ FA+ + LF+E SAKTR V+ FEEL+ KI+ TP L
Sbjct: 131 N-RVVSREEGLKFAKRHRTLFIEASAKTREGVQCTFEELIEKIIQTPDL 178
>gi|325303040|tpg|DAA34577.1| TPA_exp: GTPase Rab18 [Amblyomma variegatum]
Length = 201
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 124/169 (73%), Gaps = 2/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+S VGKS+LLL FT D F+ L+ TIGVDFK+K + + G K KLAIWDTAG E
Sbjct: 10 LKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGSE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG I+VYDV TF L D W E++ Y T + +K+LVGNK+DK
Sbjct: 70 RFRTLTPSYYRGAQGAILVYDVCNHSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDKL 128
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
R V+K++G+++AR++ LF+E SAKTR V+ FEELV KI+ TP L
Sbjct: 129 ENREVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGL 177
>gi|426364300|ref|XP_004049256.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Gorilla gorilla
gorilla]
Length = 235
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 131/198 (66%), Gaps = 32/198 (16%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW------ 66
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQQ 68
Query: 67 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 103
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TANFFLKSQIGNSPILKWAIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 104 ADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVN 163
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 164 VEQCFEELVLKILDTPSL 181
V+ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 111/203 (54%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D S++VV +FA + G FLE SAK NVEQ F + +I D S +
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTTAAG 182
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+G I Q A+ GCC
Sbjct: 183 TGKSSTITPGQTVQQQAA-GGCC 204
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/213 (50%), Positives = 141/213 (66%), Gaps = 11/213 (5%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGK 59
M++S E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK
Sbjct: 1 MSASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGK 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
+KL IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++
Sbjct: 61 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNV-KTWLEEIERYAC-EN 118
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---L 176
KLLVGNK D ++++VV +++A + G FLE SAK NVEQ F + +I +
Sbjct: 119 VNKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRV 178
Query: 177 DTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PS +E S VK + ++ S +GCC
Sbjct: 179 GPPSSAAEAPSAVKID-----KSRSVESKSGCC 206
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK +NVEQ F + I + + ++
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQPAANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N TGCCSS
Sbjct: 182 ARPPTVQIRGQPVN--QNTGCCSS 203
>gi|221052060|ref|XP_002257606.1| Rab18 GTPase [Plasmodium knowlesi strain H]
gi|193807436|emb|CAQ37942.1| Rab18 GTPase, putative [Plasmodium knowlesi strain H]
Length = 201
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 144/204 (70%), Gaps = 6/204 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FEE + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLE- 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGC 208
S V KN+ K S + + S C
Sbjct: 180 -LSVVTKNL-KLSKKEENRSNCVC 201
>gi|225713410|gb|ACO12551.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|225714426|gb|ACO13059.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462177|gb|ADD24136.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290462929|gb|ADD24512.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290463011|gb|ADD24553.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561479|gb|ADD38140.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
gi|290561689|gb|ADD38244.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P + S TGCC
Sbjct: 180 GPSGQVKIDSTPVSSKSGTGCC 201
>gi|389582066|dbj|GAB64466.1| small GTPase Rab18 [Plasmodium cynomolgi strain B]
Length = 201
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 142/200 (71%), Gaps = 5/200 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FEE + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLE- 179
Query: 185 GSSGVKKNIFKESPPQNDAS 204
S V KN+ +N A+
Sbjct: 180 -LSIVTKNLKLSKKEENRAN 198
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + S+G +
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQGRT 179
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
K + P Q A + CCS
Sbjct: 180 NASKPATVQMPRQPVAQQSSCCS 202
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +RVVS + FA E G F+E SAK +NVEQ F + I D + S+ ++
Sbjct: 122 KCDLTDKRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQPAA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ + Q T CCSS
Sbjct: 180 NNARPATVQIRGQPVEQKTSCCSS 203
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 111/208 (53%), Positives = 136/208 (65%), Gaps = 13/208 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD----TPSLLS 183
K D S +VVS ++ FA E G F+E SAK NVEQ F + I D P++ +
Sbjct: 122 KSDLTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNN 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCSS 211
S V+ FK P + GCCSS
Sbjct: 182 AKPSTVQ---FKGQPVEQKG---GCCSS 203
>gi|25151658|ref|NP_741092.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
gi|75017365|sp|Q8MXS1.1|RAB18_CAEEL RecName: Full=Ras-related protein Rab-18
gi|351018339|emb|CCD62283.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
Length = 203
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ +A+ G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L + W +E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNIIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ RVV+++EG+ FA+ + LF+E SAKT+ V+ FEEL+ KI+ TP L
Sbjct: 131 N-RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 134/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G LFLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 193 bits (491), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 130/200 (65%), Gaps = 3/200 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++TF N+ W +EID +++ + KLLVGNK
Sbjct: 104 GQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQ-WLQEIDRFAS-EGVHKLLVGNKS 161
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D E+++VV K +FA + G FLE SAK NVEQ F + +I D S S
Sbjct: 162 DLETKKVVDAKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGAASSAQSNQ 221
Query: 190 KKNIFKESPPQNDASTTGCC 209
K K ++GCC
Sbjct: 222 AKANIKVGQAVAPQQSSGCC 241
>gi|403295007|ref|XP_003938448.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 235
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 131/198 (66%), Gaps = 32/198 (16%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW------ 66
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHWQ 68
Query: 67 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 103
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TENFFLKGQIGFSPDLKWPIWQSDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 104 ADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVN 163
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 164 VEQCFEELVLKILDTPSL 181
V+ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 134/202 (66%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DT+ N+ W +EID Y+++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQ-WLQEIDRYASD-NVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D+ +E+VV +FA++ G FLE SAKT +NVEQ F + +I + ++ +
Sbjct: 123 KSDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIKERTGTATKANK 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ KE S CC
Sbjct: 183 DTV--VPKEGQALQSNSGGNCC 202
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 193 bits (490), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 136/210 (64%), Gaps = 11/210 (5%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGN+ D ++VV + ++A G FLE SAK NVEQ F + +I + P
Sbjct: 120 LLVGNQCDLTHKKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S + GS+GVK N PQ GCC
Sbjct: 180 S--APGSAGVKINPSVPVEPQPGG---GCC 204
>gi|156094918|ref|XP_001613495.1| small GTPase Rab18 [Plasmodium vivax Sal-1]
gi|148802369|gb|EDL43768.1| small GTPase Rab18, putative [Plasmodium vivax]
Length = 201
Score = 193 bits (490), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FEE + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|328870650|gb|EGG19023.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 99/197 (50%), Positives = 137/197 (69%), Gaps = 6/197 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
+K+LLIGDS VGK++++ F+ D F+E L TIGV++K+K + + K++ IWDTAGQE
Sbjct: 8 YKILLIGDSDVGKTSIVKRFSDDIFDEDLLCTIGVEYKVKTLKVDDKEVTFNIWDTAGQE 67
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
+FR L SSYYRGA GII+ YDVT+R+TF NL W EI+ +ST + +KLLVGNK+DKE
Sbjct: 68 KFRALISSYYRGAHGIILTYDVTKRETFKNLQ-YWLNEIETFSTRSNVVKLLVGNKIDKE 126
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R V+++EG++FAR LF+ECSAKT+V ++Q FEEL KIL+TP E KK+
Sbjct: 127 N-REVTREEGLEFARSKAMLFIECSAKTKVGIQQAFEELAHKILETP---DEEPQKKKKS 182
Query: 193 IFKESPPQNDASTTGCC 209
P + D + C
Sbjct: 183 TNLVQPDEQDQNMDSYC 199
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 133/204 (65%), Gaps = 4/204 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL I
Sbjct: 2 KPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ + W EID Y+ + KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKN-WMMEIDKYAM-EGVSKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK D S+RVVS +EG +FA F+E SAK NVEQ F + +I + +
Sbjct: 120 GNKCDLTSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQ 179
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S S P + S +GCC
Sbjct: 180 SRPNANVRIGPSQPVRNVS-SGCC 202
>gi|392596085|gb|EIW85408.1| GTP-binding protein ypt1 [Coniophora puteana RWD-64-598 SS2]
Length = 203
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 133/203 (65%), Gaps = 6/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + FLE SAK NVEQ F + +I D S +
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 188 GVKKNIFKESPPQN-DASTTGCC 209
G K +P Q+ ++GCC
Sbjct: 183 GAKSTTI--TPGQSVQQQSSGCC 203
>gi|390465163|ref|XP_003733352.1| PREDICTED: uncharacterized protein LOC100402013 [Callithrix
jacchus]
Length = 235
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/198 (53%), Positives = 130/198 (65%), Gaps = 32/198 (16%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW------ 66
K L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIW
Sbjct: 9 LKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVSLHQH 68
Query: 67 -----------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 103
DTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF L
Sbjct: 69 TKNFFLKGQIGFRPTLKWPIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL 128
Query: 104 ADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVN 163
D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 129 -DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDG 186
Query: 164 VEQCFEELVLKILDTPSL 181
V+ FEELV KI+ TP L
Sbjct: 187 VQCAFEELVEKIIQTPGL 204
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGD+GVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P + S TGCC
Sbjct: 180 GPSGQVKIDSTPVSSKSGTGCC 201
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 111/209 (53%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S GS K N+ +S P +S+ GCC
Sbjct: 180 ATSGGSE--KSNVNIQSTPVK-SSSGGCC 205
>gi|464565|sp|Q05976.1|RB18A_LYMST RecName: Full=Ras-related protein Rab-18A
gi|288936|emb|CAA51235.1| RAB18a [Lymnaea stagnalis]
Length = 202
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 20 GDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLT 78
G+SGVGKS+LLL FT DTF+ E + TIGVDFK+K + + G K KLAIWDTAGQERFRTLT
Sbjct: 16 GESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLT 75
Query: 79 SSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVS 138
SYYRGAQG+I+VYDV+ + +F L D W E++ +ST D +K+LVGNK+D+ + V+
Sbjct: 76 PSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLVGNKIDRANHE-VT 133
Query: 139 KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
K EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S +
Sbjct: 134 KDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSSKNL 184
>gi|330806499|ref|XP_003291206.1| Rab GTPase [Dictyostelium purpureum]
gi|325078628|gb|EGC32269.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 192 bits (488), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 92/165 (55%), Positives = 129/165 (78%), Gaps = 3/165 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
+K+LLIGDS VGK++++ F+ DTF EE+ TIGV+FK+K V + GKK+ L IWDTAGQE
Sbjct: 7 YKVLLIGDSDVGKTSIVKRFSDDTFDEEVLTTIGVEFKMKEVKVDGKKVDLCIWDTAGQE 66
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
+FR L SSYYRGA GII+ YDVT+RDTF NL + W E++ ++ + +KLLVGNK+DKE
Sbjct: 67 KFRALISSYYRGAHGIILTYDVTKRDTFENL-NYWLNEVENFANRSNLVKLLVGNKIDKE 125
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+ R +S++EG +FA++ LF+ECSAKT++ ++Q FEEL KI++
Sbjct: 126 N-REISREEGAEFAKKKAMLFIECSAKTKIGIQQAFEELAQKIIE 169
>gi|124512632|ref|XP_001349449.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
gi|19310063|emb|CAD27350.1| Rab18 GTPase [Plasmodium falciparum]
gi|23499218|emb|CAD51298.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
Length = 201
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FEE + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWINEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 109/209 (52%), Positives = 139/209 (66%), Gaps = 9/209 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRM 176
Query: 183 SEGSS--GVKKNIFKESPPQNDASTTGCC 209
G++ G +KN+ +S P +S GCC
Sbjct: 177 GPGATAGGQEKNVKIQSTPVKQSS-GGCC 204
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VVS + FA E G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCSS 203
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
S G+S + E ++S +GCC
Sbjct: 180 SSGASDPANKVKIEHGRPIESSKSGCC 206
>gi|225718924|gb|ACO15308.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P S +GCC
Sbjct: 180 GPSGQVKIDSTPVQSKSGSGCC 201
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 136/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D +++VV +FA G FLE SAK+ NVEQ F + +I P + G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S K N+ +S P S+ GCC
Sbjct: 182 SE--KSNVKIQSTPVK-TSSGGCC 202
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + +GCC
Sbjct: 183 TGKSSTITPGQTVQQQQASGCC 204
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + S+ ++
Sbjct: 122 KCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKN--RMASQPAA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
K + Q A GCCSS
Sbjct: 180 NASKPATVQMRGQPVAQQNGCCSS 203
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + I D + S+
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAASN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPPTVQIRGQPVN--QKTSCCSS 203
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 192 bits (487), Expect = 9e-47, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
S G+S + E ++S +GCC
Sbjct: 180 SSGNSDPANKVKIEHGRPIESSKSGCC 206
>gi|393244988|gb|EJD52499.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 228
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 127/174 (72%), Gaps = 5/174 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLL+IG+S VGKS+LLL FT + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 17 KLLIIGNSSVGKSSLLLRFTDEQWLPEDESSATIGVDFRVCKMEVKGKKVKLSIWDTAGQ 76
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGI +VYDV+ R++F L W E++ Y + +K+LVGNK+DK
Sbjct: 77 ERFRTITSSYYRGAQGIFLVYDVSNRESFDALPR-WFSELETY-VSSSVVKMLVGNKLDK 134
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
E R VS++EG FA GCLF+E SAKT NV + F E+V KILDTP L G
Sbjct: 135 EFSRTVSREEGQKFADRMGCLFVESSAKTAANVREAFVEMVEKILDTPELWQPG 188
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S G+ K N+ +S P +S GCC
Sbjct: 180 ATSGGAE--KSNVKIQSTPVKQSS-GGCC 205
>gi|341891892|gb|EGT47827.1| hypothetical protein CAEBREN_03430 [Caenorhabditis brenneri]
Length = 202
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 127/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMVIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L + W E+D Y TN++ IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMTEVDTYCTNENIIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ RVVS++EG+ FA+ + LF+E SAKT+ V+ FEEL+ KI+ TP L
Sbjct: 131 N-RVVSREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 133/202 (65%), Gaps = 8/202 (3%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYD+T ++TF N+ W +EID Y+ ++ KLLVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNKC 122
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEGSS 187
D ++R V + D+A + G FLE SAK+ NVEQ F + +I P + G+
Sbjct: 123 DLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAP 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
GV+ S P D + GCC
Sbjct: 183 GVR---ITGSQPVQDKKSGGCC 201
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 134/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P +S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSS-GGCC 205
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/184 (54%), Positives = 132/184 (71%), Gaps = 4/184 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ LL F+ D F TIG+DFKIK V LGGKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLS 183
+GNK D E +R V K+ G ARE+G FLE SAK+ VNVE+ F +L IL+ TPS +
Sbjct: 120 LGNKCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKDA 179
Query: 184 EGSS 187
+G +
Sbjct: 180 DGHN 183
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E SAK +NVEQ F + I D + ++
Sbjct: 122 KSDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANN 181
Query: 188 GVKKNI-FKESPPQNDASTTGCCSS 211
+ + P + AS CCSS
Sbjct: 182 ARPATVQIRGQPVEQKAS---CCSS 203
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D +++VV +FA G FLE SAK NVEQ F + +I P S G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGG 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S K N+ +S P +S GCC
Sbjct: 182 SE--KSNVNIQSTPVK-SSGGGCC 202
>gi|68075529|ref|XP_679683.1| Rab18 GTPase [Plasmodium berghei strain ANKA]
gi|56500482|emb|CAH95262.1| Rab18 GTPase, putative [Plasmodium berghei]
Length = 201
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/178 (55%), Positives = 133/178 (74%), Gaps = 3/178 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FEE + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL 178
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 141/212 (66%), Gaps = 22/212 (10%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKIKLSIWDTAGQ 73
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV+ R+TF L W E++ Y + IK+LVGNK+DK
Sbjct: 74 ERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WYSELETY-VSSSVIKILVGNKLDK 131
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL--------S 183
E R V+ EG FA G LF+E SAKT V V++ F E+V KIL+TP L S
Sbjct: 132 EFSRQVTAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKILETPELWANSTKHSTS 191
Query: 184 EGSSGVKK-----NIFKESPPQNDASTTGCCS 210
G+ G+ ++ ++PPQ+ G CS
Sbjct: 192 NGNGGMPGGVQVLDLRNDAPPQD----AGGCS 219
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTKS--GCC 205
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKSAS-GGCC 201
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 133/204 (65%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E SAK +NVEQ F + I D + S+ ++
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKD--RMASQPAA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ + Q T CCSS
Sbjct: 180 NNARPATVQIRGQPVEQKTSCCSS 203
>gi|66804573|ref|XP_636019.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74896885|sp|Q54GY8.1|RAB18_DICDI RecName: Full=Ras-related protein Rab-18
gi|60464366|gb|EAL62514.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 141/203 (69%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E D +K+LLIGDS VGK++++ F+ DTF+E L TIGV+FK+K V + GKK+ L IWD
Sbjct: 2 EEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWD 61
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQE+FR L SSYYRGA GII+ YDVT+R++F NL + W E++ ++ + +KLLVGN
Sbjct: 62 TAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K+DKE+ R V+++EG +FA++ LF+ECSAK+++ ++Q FEEL KI++ P S
Sbjct: 121 KIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQP 179
Query: 188 GVKK--NIFKESPPQNDASTTGC 208
+ ++ E P ++ C
Sbjct: 180 KQRNTGSVKVEDEPDHNQGVCSC 202
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTRS--GCC 205
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 141/210 (67%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N+ S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENNRS--GCC 205
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 137/210 (65%), Gaps = 8/210 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV ++A + FLE SAK NVEQ F + +I + P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
+ GSS K N S S +GCCS
Sbjct: 180 SVPSGSSHDKIN---PSTTPVKPSGSGCCS 206
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA + FLE SAK NVEQ F + +I D S
Sbjct: 122 KSDLTGKKVVEYTVAKEFADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSAAPG 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + N GCC
Sbjct: 182 AGKSSTITPGQSVNQQQGGGCC 203
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 133/202 (65%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK+ NVEQ F + +I +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATTGG 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P AS GCC
Sbjct: 182 NEKSNVKIQSTPVKPAS-GGCC 202
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 135/207 (65%), Gaps = 3/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKCDLHTKKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPP 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
S G+S + E ++S +GCC
Sbjct: 180 SSGASDPANKVKIEHGRPIESSKSGCC 206
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 134/206 (65%), Gaps = 12/206 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +++VV + FA E G FLE SAK NVEQ F E+ ++ P++ S
Sbjct: 122 KADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNS 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
+ V N + P N GCC
Sbjct: 182 NKPNNVSLN---KGQPLNQKG--GCC 202
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA + FLE SAK NVEQ F + +I D + +
Sbjct: 123 KSDLTGKKVVEYTVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSATAPTG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + + GCC
Sbjct: 183 AAKSSTVTPGQSVQSQQSNGCC 204
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VV+ + FA E G F+E SAK +NVEQ F + I D + ++
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAAN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPATVQIRGQPVN--QKTSCCSS 203
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + S+ +
Sbjct: 122 KCDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKN--RMASQPAG 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
K + Q A GCCSS
Sbjct: 180 NASKPATVQMRGQPVAQQNGCCSS 203
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + I D + ++
Sbjct: 122 KSDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAAN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPPTVQIRGQPVN--QKTSCCSS 203
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 126/172 (73%), Gaps = 5/172 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVNGKKVKLSIWDTAGQ 72
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSSSVVKIIVGNKVDK 130
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
E R VS EG FA+ G LF+E SAKT V V + F+E+V KI+DTP L +
Sbjct: 131 EFSRQVSYSEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDTPELWA 182
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGS 186
K D +RVV ++ FA E G FLE SAK NVEQ F + ++ S L+EG+
Sbjct: 122 KCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTEGN 181
Query: 187 SGVKKNIFKESPPQNDASTTGCCS 210
K P Q S CCS
Sbjct: 182 RKTNTVEMKGQPLQQKGS---CCS 202
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D +++ V +FA G FLE SAK NVEQ F + +I + P++ S G
Sbjct: 122 KSDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPTMASGG 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCCS 210
+ K P +S+ GCCS
Sbjct: 182 AKKKDTLDIKAKPA---SSSGGCCS 203
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 131/206 (63%), Gaps = 5/206 (2%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q FDYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL I
Sbjct: 6 NQIFDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQI 65
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLV
Sbjct: 66 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLV 123
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK D + +VV+ + FA E G F+E SAK +NVEQ F + I D +
Sbjct: 124 GNKSDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAA 183
Query: 186 SSGVKKNIFKESPPQNDASTTGCCSS 211
++ + P N T CCSS
Sbjct: 184 ANARPATVQIRGQPVN--QKTSCCSS 207
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 134/204 (65%), Gaps = 12/204 (5%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS+LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGNK
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAA-ENVNKLLVGNKC 152
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSEG 185
D E +RVV+ ++G +FA G FLE SAKT NVEQ F ++ ++ + PS
Sbjct: 153 DLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPAT 212
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
GV N+ + Q GCC
Sbjct: 213 KPGV--NLRSQ---QVKKEGGGCC 231
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 136/205 (66%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK+ NVEQ F + +I + + ++ +
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKN--RMATQPMN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N S GCCSS
Sbjct: 180 NARPPTVQIRGQPVNQKS--GCCSS 202
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 110/210 (52%), Positives = 133/210 (63%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E+ R VS + FA E G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQPAN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q A GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVAQKGGCCSS 202
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 5/205 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
QE+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IW
Sbjct: 3 QEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D + +VVS + FA E G F+E SAK NVEQ F + I + +
Sbjct: 121 NKCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMN 180
Query: 187 SGVKKNIFKESPPQNDASTTGCCSS 211
+ ++ + P N S GCCSS
Sbjct: 181 NARPPSVQLQGQPVNQKS--GCCSS 203
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTKS--GCC 205
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTKS--GCC 205
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + ++
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCSS 203
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 137/205 (66%), Gaps = 10/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +++VV + FA E G FLE SAK NVEQ F + +I + + ++++
Sbjct: 122 KSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPVINK 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ E P N +S + CC
Sbjct: 182 PGATIRPG---EGKPVN-SSKSSCC 202
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 4/205 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
+ Q+ DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 2 AAQQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNK D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 120 VGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGAT 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
K N+ +S P S+ GCC
Sbjct: 180 AGGAEKSNVKIQSTPVKQ-SSGGCC 203
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E SAK +NVEQ F + I D + +S
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANS 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P T CCSS
Sbjct: 182 ARPATVQIRGQPVE--QKTSCCSS 203
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKSAS-GGCC 201
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKSAS-GGCC 201
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAS-GGCC 201
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 140/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P +N S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTRS--GCC 205
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + ++
Sbjct: 122 KNDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCSS 203
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R+++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>gi|70947149|ref|XP_743217.1| Rab18 GTPase [Plasmodium chabaudi chabaudi]
gi|56522611|emb|CAH89069.1| Rab18 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 200
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 138/189 (73%), Gaps = 6/189 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLL+GDS VGKS++L ++ + FE+ + TIG+DFK+K++ + K +K+
Sbjct: 3 NKNKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEKKVLSTIGIDFKVKYLKIDNKTIKVG 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRTLTS+YYR A II+VYD T R++F NL D+W EID YSTN++ IK+L
Sbjct: 63 IWDTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKML 121
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
V NK+DK + V+K EG +FA E LF E SAK +N+ CFEEL+ +IL+ PSLL
Sbjct: 122 VANKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLL-- 178
Query: 185 GSSGVKKNI 193
S V KN+
Sbjct: 179 -ESVVTKNL 186
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ S
Sbjct: 122 KNDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPSG 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
G K + + +GCCSS
Sbjct: 180 GAKPPTVQIRGQPVNQQQSGCCSS 203
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 131/206 (63%), Gaps = 10/206 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LL F DT++E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNV-KTWLSEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D S++VV FA E G F+E SAK NVEQ F E+ ++ P S
Sbjct: 122 KSDLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEIKTRMASQPQAAS 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
S G E P N S+ CC
Sbjct: 182 GASRGATIRP-GEGRPVNAKSS--CC 204
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 102/195 (52%), Positives = 128/195 (65%), Gaps = 6/195 (3%)
Query: 16 LLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERF 74
LLLIGDSGVGKS LLL F DT+ TIGVDFKI+ + +GGK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 75 RTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESE 134
RT+TSSYYRGA GII+VYDVT RD+F N+ +W KEI+ Y+T C +LLVGNK D ++
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNV-QMWVKEIESYATEGVC-RLLVGNKCDLVNK 118
Query: 135 RVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNIF 194
+VV G A +G FLE SAK NVEQ F+ + +I+ + ++G G K +
Sbjct: 119 KVVDYNTGKQLADSFGISFLETSAKNATNVEQAFQTMATEIMKHTAPRNDGPIGTKVEVL 178
Query: 195 KESPPQNDASTTGCC 209
PP S GCC
Sbjct: 179 ---PPSEVKSEGGCC 190
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 136/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I + G++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 188 --GVKKNIFKESPPQNDASTTGCC 209
G +K + ES P AS GCC
Sbjct: 179 AGGSEKTMKIESTPVKPAS-GGCC 201
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ LL F+ DTF TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N+A W + I ++ N+D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +R+++K G A+E G F+E SAK +NVEQ F L IL
Sbjct: 120 LGNKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDT 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
GS GV K KE +S + CC
Sbjct: 180 GSPGVVKPDMKEGS----SSGSKCC 200
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST ++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK NVEQ F + +I + +
Sbjct: 120 LLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPI 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ S S P + A+ GCC
Sbjct: 180 TAASDSKPSVKINSSTPVS-ANKGGCC 205
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV DFA + FLE SAK+ NVEQ F + +I D + +
Sbjct: 125 KSDLTNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 188 GVKKNIFKESPPQN--DASTTGCC 209
K+ K QN S GCC
Sbjct: 185 AGGKSTLKVGQGQNVSQQSNGGCC 208
>gi|417408724|gb|JAA50900.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 214
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 17 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 76
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 77 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 134
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 135 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 191
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A +GCC
Sbjct: 192 SGGERPNLKIDSTPVKQAG-SGCC 214
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 137/205 (66%), Gaps = 8/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + + GKK+KL
Sbjct: 2 AKKSYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N++ W + I+ ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISK-WLRNIEEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + R+VS++ G ARE+G FLE SAKT +N+EQ F+ L IL L++
Sbjct: 120 LGNKCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKE--LNK 177
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
S NI Q D GCC
Sbjct: 178 DSEEPSNNI--HVHDQKDKK-GGCC 199
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + + + CC
Sbjct: 183 AAKSSTVTPGQSVQQSQSGSCC 204
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 40 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWD 99
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +DTFTN+ W EID Y+ + KLLVGN
Sbjct: 100 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLHEIDRYAC-EGVNKLLVGN 157
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV DFA + FLE SAK+ NVEQ F + +I D + ++
Sbjct: 158 KSDLTQKKVVEYTVAKDFADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTV-NT 216
Query: 188 GVKKNIFKESPPQN--DASTTGCC 209
G K K QN ++GCC
Sbjct: 217 GSNKATLKVGAGQNVQQQQSSGCC 240
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VV+ + FA E G F+E SAK NVEQ F + I D + ++
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAAN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPATVQIRGQPVN--QKTSCCSS 203
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQPAANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCSS 203
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/210 (51%), Positives = 136/210 (64%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK NVEQ F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPV 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ SE VK N +P + GCC
Sbjct: 180 TAASENKPSVKIN--SSTPVKQGGG--GCC 205
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLL+IGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAS-GGCC 201
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 132/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS + FA E G FLE SAK NVEQ F + I + + S+ +S
Sbjct: 122 KADLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKN--RMASQPAS 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
K Q + GCCSS
Sbjct: 180 NSAKPPTVNIRGQPVTQSGGCCSS 203
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA + FLE SAK+ NVEQ F + +I D + +
Sbjct: 125 KSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 188 GVKKNIFKESPPQN--DASTTGCC 209
K+ K QN S GCC
Sbjct: 185 AGGKSTLKVGAGQNVSQQSAGGCC 208
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 48 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 107
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 108 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 165
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 166 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 225
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 226 AEKSNVKIQSTPVKQ-SGGGCC 246
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|402218390|gb|EJT98467.1| GTP-binding protein ypt1 [Dacryopinax sp. DJM-731 SS1]
Length = 206
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T+SYYRGA GII+VYDVT DTFTN+ W +EID +++ + KLLVGN
Sbjct: 65 TAGQERFRTITASYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRFAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA + G FLE SAK NVEQ F + +I D S +
Sbjct: 123 KSDLTNKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPAG 182
Query: 188 GVKKNIFKESPPQ--NDASTTGCC 209
G K K Q ++ CC
Sbjct: 183 GASKGGVKVGQGQAVGQQTSNSCC 206
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 39 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 98
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 99 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 156
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 157 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 216
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 217 AEKSNVKIQSTPVKQ-SGGGCC 237
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R VS FA E G F+E SAK+ NVEQ F + +I + + ++
Sbjct: 122 KSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 AKPPTVQIRGQPVNQKS--GCCSS 203
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLSEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTGKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTPSG 182
Query: 188 GVKKNIFKESPPQNDASTT--GCC 209
K + +P Q S T GCC
Sbjct: 183 AAKSSTV--TPGQTVQSQTGGGCC 204
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G K N+ S+ GCC
Sbjct: 182 GEKPNVKLTPGTTVKPSSGGCC 203
>gi|225712878|gb|ACO12285.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F NL W +EI Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQ-WLQEIARYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLNMPFLEASAKNVTNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P + S TGCC
Sbjct: 180 GPSGQVKIDSTPISSKSGTGCC 201
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 122/168 (72%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ ++L K +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT RD+F N+ W +EID Y+ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D S+RVV+ EG + A +G F+E SAK NVEQ F + +I
Sbjct: 123 KCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI 170
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGG 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G K N+ S+ GCC
Sbjct: 182 GEKPNVKLTPGTTVKTSSGGCC 203
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 138/205 (67%), Gaps = 13/205 (6%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG-GKKMKLAIWDTAGQ 71
FKLLLIGDSGVGKS+LL+ +T+D FE +LS TIGVDFK+K V + G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT + YRG+ + VYDV R++F NL IW +E+ YS N + IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IWMEELKTYSDNPNMIKLLVGNKID- 129
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKK 191
R++S++EG+ FAR Y + E SAKT V Q F ++V KI + L ++G K+
Sbjct: 130 SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQGK---KR 186
Query: 192 NIFKESPPQNDAST------TGCCS 210
+ ES N S+ +GCCS
Sbjct: 187 ALSNESNRANLTSSQEMQSHSGCCS 211
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 135/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +++VV + FA E G FLE SAK NVE+ F ++ +I + + L+
Sbjct: 122 KSDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKMAGEIKNRMASQPALNN 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
G G + P +A+ + CC
Sbjct: 182 GPKGATVRPGEGRPV--NANKSNCC 204
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V ++A + G FLE SAK+ NVEQ F + +I + + + +
Sbjct: 125 KCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGT 184
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G I S P N+ + GCC
Sbjct: 185 GPSVRI-GGSQPVNEKKSGGCC 205
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +R VS + FA E G F+E SAK +NVEQ F + I D + ++
Sbjct: 122 KCDLADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKDRMASQPAANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P + T CCSS
Sbjct: 182 ARPATVQIRGQPVD--QKTSCCSS 203
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 138/207 (66%), Gaps = 9/207 (4%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQE+DYLFK+LLIG+S VGKS+LLL F + F E PTIGVDFKI+ L GK +KL I
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+T+SYY+GA GII+VYDVT + +F ++ + W E++ Y+ N++ +++LV
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNKVD ES+R V+ +EG + A F+E SAK NVE+ F L +I + +++G
Sbjct: 122 GNKVDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEI---KAKVAKG 178
Query: 186 SSGVKKNIFKESPP---QNDASTTGCC 209
S V P QN TGCC
Sbjct: 179 SEAVPIKTGPRITPDQQQNTVKDTGCC 205
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 137/209 (65%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI---KKRM 176
Query: 183 SEGSS--GVKKNIFKESPPQNDASTTGCC 209
G++ G +K+ K + S+ GCC
Sbjct: 177 GPGATAGGAEKSNVKIQSTKVKQSSGGCC 205
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 118
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 176
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 177 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGG 236
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 237 AEKSNVKIQSTPVKQ-SGGGCC 257
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 126/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA + FLE SAK NVEQ F + +I D S
Sbjct: 123 KSDLTAKKVVEYGAAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATSTSQG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K S GCC
Sbjct: 183 TGKGVTVTAGQSVQQQSGGGCC 204
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 189 bits (480), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 132/202 (65%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V ++A + G FLE SAK+ NVEQ F + +I + + + +
Sbjct: 125 KCDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGT 184
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G I S P N+ + GCC
Sbjct: 185 GPSVRI-GGSQPVNEKKSGGCC 205
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 135/209 (64%), Gaps = 8/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV ++A G FLE SAK NVEQ F + +I + PS
Sbjct: 120 LLVGNKCDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPS 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+G +G I +P + GCC
Sbjct: 180 PAPQG-AGSNVKINSSTPVKQGGG--GCC 205
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + + P N S GCCSS
Sbjct: 180 GSKPSTVQIRGQPVNQQS--GCCSS 202
>gi|393214870|gb|EJD00362.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 234
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 126/176 (71%), Gaps = 5/176 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 19 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEINGKKVKLSIWDTAGQ 78
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R++F L W E+ Y ++ +K+LVGNKVDK
Sbjct: 79 ERFRTITSSYYRGAQGIILVYDVANRESFAALPR-WYSELGTYVSDS-VVKILVGNKVDK 136
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
E R V EG FA+ G LF+E SAKT V V + F ++V +ILDTP L + S+
Sbjct: 137 EFSRQVPTSEGAAFAQRMGSLFVEASAKTAVGVREAFTDVVERILDTPELWAPVSN 192
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 132/210 (62%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKL LIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E+ R VS + FA E G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQPAN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q A GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVAQKGGCCSS 202
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 133/206 (64%), Gaps = 11/206 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D S++VV FA E G FLE SAK NVEQ F E+ ++ P
Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTK 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
G V+ +E P N S++ CC
Sbjct: 182 AGGPVVRP---QEGKPINSKSSS-CC 203
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 135/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + S+ ++
Sbjct: 122 KCDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPAN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N S GCCS+
Sbjct: 180 NARPPTVQIRGQPMNQKS--GCCST 202
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 134/207 (64%), Gaps = 12/207 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N+ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLHEIDRYA-NESVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +++VV +FA G FLE SAKT NVEQ F +E+ ++ P
Sbjct: 122 KNDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKERMASQPQ-TQ 180
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ SSG+ + Q ++ CCS
Sbjct: 181 KTSSGIHVG----ANAQEVKESSSCCS 203
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASDS-VSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGS 186
K D +RVV ++ FA E G FLE SAK NVEQ F + ++ S L+EG+
Sbjct: 122 KCDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGN 181
Query: 187 SGVKKNIFKESP-PQNDASTTGCCS 210
K P PQ S CCS
Sbjct: 182 RKANTIEMKGQPLPQRGGS---CCS 203
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 134/208 (64%), Gaps = 13/208 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD----TPSLLS 183
K D + +VVS + FA E G F+E SAK NVEQ F + I D P++ +
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAMNN 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCSS 211
S V+ + P + GCCSS
Sbjct: 182 AKPSTVQ---LRGQPVEQKG---GCCSS 203
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VV+ + FA E G F+E SAK NV+Q F + I D + ++
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAAN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPATVQIRGQPVN--QKTSCCSS 203
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAG+ERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 134/203 (66%), Gaps = 6/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F+N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++ V + +FA+ FLE SAK NVEQ F + +I + L S+ +
Sbjct: 122 KCDLTSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIKN--RLASQPIT 179
Query: 188 GVKKNIFKESP-PQNDASTTGCC 209
++ +P P S GCC
Sbjct: 180 TQQQPSLGITPAPSKPQSNGGCC 202
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 104/185 (56%), Positives = 125/185 (67%), Gaps = 6/185 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLNEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D ++R V + FA E G FLE SAK NVEQ F + +I + + L++
Sbjct: 122 KSDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPALNQ 181
Query: 185 GSSGV 189
G G
Sbjct: 182 GPKGA 186
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R VS FA E G F+E SAK+ NVEQ F + +I + + ++
Sbjct: 122 KSDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N GCCSS
Sbjct: 182 AKPPTVQIRGQPVN--QKNGCCSS 203
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 105/201 (52%), Positives = 131/201 (65%), Gaps = 4/201 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 151
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 152 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 211
Query: 189 VKKNIFKESPPQNDASTTGCC 209
K N+ +S P S+ GCC
Sbjct: 212 EKSNVKIQSTPVKQ-SSGGCC 231
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKQAG-GGCC 201
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +DTF N+ W EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVK-TWFHEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + +E ++
Sbjct: 122 KSDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGGAAENTA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K N+ + S++ CC
Sbjct: 182 A-KANVNLRGQNVSQGSSSSCC 202
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/170 (59%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q E+D+LFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL I
Sbjct: 4 QSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+V+DVT +++F N+ W EID Y+ N++ KLLV
Sbjct: 64 WDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D S+RVV FA E G F+E SAK NVEQ F + +I
Sbjct: 122 GNKTDLTSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFMTMAAEI 171
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +VVS + FA E G F+E SAK NVEQ F + +I + + S+ S+
Sbjct: 122 KSDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKN--RMASQPSN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N S GCCSS
Sbjct: 180 NARPPTVQIRGQPVNQKS--GCCSS 202
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 188 bits (478), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 133/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I S
Sbjct: 122 KSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-PGAASG 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P AS GCC
Sbjct: 181 GERPNLKIDSSPVKPAS-GGCC 201
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA + FLE SAK+ NVEQ F + +I D + +
Sbjct: 125 KSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSSTVNNQ 184
Query: 188 GVKKNIFKESPPQN--DASTTGCC 209
K+ K QN S GCC
Sbjct: 185 AGGKSTLKVGAGQNVSQQSNGGCC 208
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 72 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 131
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 132 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 189
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I S
Sbjct: 190 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-PGAASG 248
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 249 GERPNLKIDSTPVKPAG-GGCC 269
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 137/209 (65%), Gaps = 9/209 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA + FLE SAK NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
++ + K+N+ +S P S GCC
Sbjct: 180 AVTNET---KQNVKIQSTPVKQ-SGGGCC 204
>gi|338721465|ref|XP_001494344.3| PREDICTED: ras-related protein Rab-18-like [Equus caballus]
Length = 248
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/154 (62%), Positives = 117/154 (75%), Gaps = 3/154 (1%)
Query: 29 LLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQG 87
LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQERFRTLT SYYRGAQG
Sbjct: 66 LLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQG 125
Query: 88 IIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAR 147
+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR
Sbjct: 126 VILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFAR 183
Query: 148 EYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 184 KHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 217
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-GVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS + FA E G FLE SAK NVEQ F + I + + +S
Sbjct: 122 KSDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAIKNRMASQPANNS 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P + GCCSS
Sbjct: 182 AKPPTVNIRGQPVTQSG--GCCSS 203
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 123/172 (71%), Gaps = 5/172 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 73
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 74 ERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSPSVVKIIVGNKVDK 131
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
E R VS EG FA LF E SAKT + V + F+E+V KILDTP L +
Sbjct: 132 EFSRQVSHSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTPELWA 183
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 132/202 (65%), Gaps = 8/202 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LL+ F ++F E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V + ++FA+E+ FLE SAK +NVE F E+ +I + + + SS
Sbjct: 122 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V N Q + GCC
Sbjct: 182 NVTVN-----STQPVTKSGGCC 198
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-SVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VVS + FA E G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KCDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCC S
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCLS 203
>gi|268575806|ref|XP_002642883.1| C. briggsae CBR-RAB-18 protein [Caenorhabditis briggsae]
gi|74765201|sp|P90726.1|RAB18_CAEBR RecName: Full=Ras-related protein Rab-18
gi|1710360|gb|AAB38279.1| membrane associated GTP binding protein RAB18 [Caenorhabditis
briggsae]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 132/196 (67%), Gaps = 8/196 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R V+++EG+ FA+ + LF+E SAKT+ V+ FEEL+ KI+ TP L +
Sbjct: 131 N-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDN-----DRP 184
Query: 193 IFKESPPQNDASTTGC 208
F+ P + +S C
Sbjct: 185 TFRLGQPTDTSSGNLC 200
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 67 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 126
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 127 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 184
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I S
Sbjct: 185 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-PGAASG 243
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 244 GERPNLKIDSTPVKPAG-GGCC 264
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 133/204 (65%), Gaps = 3/204 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQE+DYLFK+LLIG+S VGKS+LLL F + F E PTIGVDFKI+ L GK +KL I
Sbjct: 4 QQEYDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+T+SYY+GA GII+VYDVT + +F ++ + W E++ Y+ N++ +++LV
Sbjct: 64 WDTAGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNKVD ES+R V+ +EG + A F+E SAK NVE+ F L +I + SE
Sbjct: 122 GNKVDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEIKAKVAKSSEA 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
QN TGCC
Sbjct: 182 IPVKTGPRITPDQQQNTVKDTGCC 205
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKCDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVE+ F + I + + ++
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQPAANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQKS--GCCSS 203
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 132/210 (62%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D SER VS FA E G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD--RMASQPTN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q +GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVGQKSGCCSS 202
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS +FA + G F+E SAK NVE F + I + + S+ S+
Sbjct: 122 KSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKN--RMASQPSA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
K + Q +GCCSS
Sbjct: 180 NNAKPPTVQIRGQPVGQKSGCCSS 203
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 133/210 (63%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E+ R VS + FA G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKD--RMASQPAN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q A GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVAQKGGCCSS 202
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q++DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IW
Sbjct: 3 QDYDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W EID Y+++ + +K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQ-WLNEIDRYASD-NVVKILVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D S +VVS + FA E G FLE SAK NVEQ F + +I
Sbjct: 121 NKSDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 139/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P + S GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVEKPNS--GCC 205
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 106/206 (51%), Positives = 132/206 (64%), Gaps = 4/206 (1%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
T E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 2 TMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKL 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNK D +++VV ++A FLE SAKT NVEQ F + +I + +
Sbjct: 120 LVGNKCDLTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEIKNRMGPGT 179
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
S G + S P D GCC
Sbjct: 180 AASPGQSNKVDISSKPV-DGKQGGCC 204
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 107/202 (52%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ + W EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S+R V+ +EG +FA F+E SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSR 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
S P S +GCC
Sbjct: 182 PNANVRLGPSQPVRSVS-SGCC 202
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + P N S GCCSS
Sbjct: 180 GAKPPTVQIRGQPVNQQS--GCCSS 202
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 134/209 (64%), Gaps = 17/209 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +++VV + FA E G FLE SAK NVEQ F E+ ++ PS+ S
Sbjct: 122 KCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSS 181
Query: 184 EGSSGV--KKNIFKESPPQNDASTTGCCS 210
+ + + + + P CCS
Sbjct: 182 AKPTTIPLRGQVLQHKP--------NCCS 202
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 131/204 (64%), Gaps = 6/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E SAK NVEQ F + +I + + S+
Sbjct: 122 KSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSA 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P A GCCSS
Sbjct: 182 RPATVQIRGQPVNQKA---GCCSS 202
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 134/210 (63%), Gaps = 12/210 (5%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S E+DYLFKLLLIGDS VGKS LLL F D + + TIGVDFKI+ V L GK +KL
Sbjct: 2 SASEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W EID Y+++ C KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQ-WLSEIDRYASDSVC-KLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPS 180
VGNK D +VV +E FA G FLE SAK +NVE F E+ K+ P+
Sbjct: 120 VGNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPA 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
+E S V ++ K P Q S+ CCS
Sbjct: 180 --AERKSTVHVHM-KGQPIQQQQSS--CCS 204
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 131/204 (64%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F ++ + TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + ++
Sbjct: 122 KSDLTANKVVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEIKNRMASQPAMNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 182 ARPPTVQIRGQPVNQNS--GCCSS 203
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 124/172 (72%), Gaps = 5/172 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+ LL F+ + + EE S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 14 KLLLIGNSSVGKSSFLLRFSDEQWLPEEEASATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 73
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII++YDV+ R++F L W E++ Y + K++VGNKVDK
Sbjct: 74 ERFRTITSSYYRGAQGIILMYDVSNRESFDALPR-WFSELETY-VSPSVAKIIVGNKVDK 131
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
E R V+ EG FA+ LF+E SAKT V V + FEELV +I+DTP L +
Sbjct: 132 EFSRQVATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPELWA 183
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 129/193 (66%), Gaps = 6/193 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++ + G FLE SAK NVEQ F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPV 179
Query: 180 SLLSEGSSGVKKN 192
+ SE VK N
Sbjct: 180 TAASENKPSVKIN 192
>gi|409046045|gb|EKM55525.1| hypothetical protein PHACADRAFT_256210 [Phanerochaete carnosa
HHB-10118-sp]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/202 (53%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTSKKVVEYGVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTSTTSG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K ++GCC
Sbjct: 183 TGKSTTITPGQTVQQNQSSGCC 204
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS +LL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W KEID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLKEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I + G+S
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEI---KKRMRPGAS 178
Query: 188 G--VKKNIFKESPPQNDASTTGCC 209
G K ++ ES P S GCC
Sbjct: 179 GGSEKPDLKIESTPVQQ-SGGGCC 201
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 133/206 (64%), Gaps = 5/206 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ + F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF ++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVVSK+ G ARE+G F+E SAK +N+++ F EL ILD +
Sbjct: 120 LGNKCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTA--GR 177
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ I E P + CC+
Sbjct: 178 EADADHSRIAVERRPSRAPPSRACCT 203
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 130/200 (65%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P +S GCC
Sbjct: 179 KSNVKIQSTPVKQSS-GGCC 197
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV + FA E G FLE SAK +NVE F + +I + + S+ +
Sbjct: 122 KNDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKN--RMASQPAM 179
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
+ + Q +GCCS
Sbjct: 180 NSTRPTTVQMKGQPVVPKSGCCS 202
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/203 (53%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV FA E G FLE SAK NVEQ F + +I + + SS
Sbjct: 122 KSDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSS 181
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
+ N + Q GCCS
Sbjct: 182 TSRPNNVQLR-GQTILPKGGCCS 203
>gi|395544514|ref|XP_003774155.1| PREDICTED: ras-related protein Rab-1B [Sarcophilus harrisii]
Length = 241
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 108/207 (52%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
SQ+ DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 41 SQRGSDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQ 100
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLL
Sbjct: 101 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLL 158
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNK D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 159 VGNKSDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKR---MGP 215
Query: 185 G--SSGVKKNIFKESPPQNDASTTGCC 209
G S G + N+ +S P AS GCC
Sbjct: 216 GAASGGERPNLKIDSTPVKPAS-GGCC 241
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 50 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 109
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 110 LQRWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 167
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 168 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 227
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 228 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 253
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 127
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D + +VVS + FA E G F+E SAK NVEQ F + +I + + ++
Sbjct: 128 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTAR 187
Query: 190 KKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 188 PPTVQIRGQPVNQKS--GCCSS 207
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 128/203 (63%), Gaps = 5/203 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWDT
Sbjct: 8 LDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 67
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 125
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D + +VVS + FA E G F+E SAK NVEQ F + I D + ++
Sbjct: 126 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANA 185
Query: 189 VKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 186 RPPTVQIRGQPVN--QKTSCCSS 206
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + S+ ++
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQPAT 179
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
K + Q A + CCS
Sbjct: 180 NASKPATVQMRGQPVAQQSSCCS 202
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 133/204 (65%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I + G++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 188 --GVKKNIFKESPPQNDASTTGCC 209
G K N+ S+ GCC
Sbjct: 179 VGGEKPNVKLTPGTSVKPSSGGCC 202
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + S+ +
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPVN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N S GCCSS
Sbjct: 180 NARPPTVQIRGQPVNQKS--GCCSS 202
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D + +VVS + FA E G F+E SAK NVEQ F + +I + + ++
Sbjct: 119 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTAR 178
Query: 190 KKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 179 PPTVQIRGQPVNQKS--GCCSS 198
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS + G FA E G FLE SAK NVE+ F + +I + + S+ +
Sbjct: 122 KCDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKN--RMASQPAM 179
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
+ + Q + CCS
Sbjct: 180 NASRPATVQMRGQPVTQKSSCCS 202
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/203 (53%), Positives = 129/203 (63%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TS YYRGA GII+VYDVT ++F N+ W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVK-TWLNEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D S+R V + FA E G FLE SAK+ NVEQ F + +I + S
Sbjct: 122 KNDLTSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEIKNRMASQTMAAK 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
G E P +D +T CC
Sbjct: 182 PGAATIRPGEGKPISDNRST-CC 203
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 136/210 (64%), Gaps = 9/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + FLE SAK NVEQ F + +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPG 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S+ +G VK I S P +S GCC
Sbjct: 180 SMPQDGKQNVK--IQGASTPVKQSS-GGCC 206
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 130/200 (65%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 61 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 120
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 121 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 178
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 179 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 238
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P +S GCC
Sbjct: 239 KSNVKIQSTPVKQSS-GGCC 257
>gi|240849344|ref|NP_001155696.1| RAB18B, member RAS oncogene family-like [Acyrthosiphon pisum]
gi|328718584|ref|XP_003246519.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|328718586|ref|XP_003246520.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|239789319|dbj|BAH71290.1| ACYPI007125 [Acyrthosiphon pisum]
Length = 200
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 100/191 (52%), Positives = 133/191 (69%), Gaps = 6/191 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+LLIG SGVGKS LL FT DTF + + TIGVDFK++ + + +KLA+WDTAGQE
Sbjct: 9 LKILLIGQSGVGKSCLLCRFTDDTFNVDNAVTIGVDFKMRKITVDNNNIKLALWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT +YYR QG ++VYDV+ RD+FT L + W E++ YST + IK++VGNK+D
Sbjct: 69 RFRTLTPNYYRDGQGAVLVYDVSNRDSFTCL-ETWINELNRYSTKTNIIKMVVGNKIDM- 126
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS--EGSSGVK 190
ER V+++EGI FAR + LF+E SAKT+ V FEELV KI++TPSL E ++ V+
Sbjct: 127 -ERQVTREEGIAFARRHQTLFIETSAKTKEGVYMAFEELVRKIINTPSLWEKLEDANVVR 185
Query: 191 KNIFKESPPQN 201
N + QN
Sbjct: 186 CNDDHSASEQN 196
>gi|327287404|ref|XP_003228419.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 212
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 3/197 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L G+ +K
Sbjct: 2 STISPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGRTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ +W +EI+ Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNM-HLWMEEINRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
L+VGNK D S++ V ++A G FLE SAK NVEQ F + +I + S
Sbjct: 120 LIVGNKSDLTSKKAVDYTTAKEYADSLGVPFLETSAKNATNVEQAFLTMAAEIKNRVSSG 179
Query: 183 SEGSSGVKKNIFKESPP 199
+ K N+ +S P
Sbjct: 180 PTQNDSHKSNLHIQSGP 196
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 136/206 (66%), Gaps = 6/206 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+++DYLFKL+LIGDSGVGKS LLL F D F E TIGVDF+ + V +G K +KL IW
Sbjct: 10 KDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQIW 69
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GIIMVYD T D+F ++ D W KE++ Y++ C KLLVG
Sbjct: 70 DTAGQERFRTITSAYYRGADGIIMVYDTTSSDSFDHVND-WLKEVNRYASEGTC-KLLVG 127
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSE 184
NK D+ ++R V+ ++ +FA + G FLE SAKT NVE+ F + +++ + +
Sbjct: 128 NKSDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMAGELIKQREAKIAAN 187
Query: 185 GSSGVKKNIFKES-PPQNDASTTGCC 209
G G + K S + A+ GCC
Sbjct: 188 GGDGKSDSQGKVSLTSEKKAALGGCC 213
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 127/203 (62%), Gaps = 8/203 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLL+IGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLHEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +VV + FA E G FLE SAK +NVEQ F + +I GS
Sbjct: 122 KCDLTENKVVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSGSK 181
Query: 188 GVKKNIFKESP-PQNDASTTGCC 209
+ K P PQN+ CC
Sbjct: 182 SAESVQMKGQPIPQNN----NCC 200
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 130/210 (61%), Gaps = 5/210 (2%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
S T E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +
Sbjct: 53 SKTMNPEYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTI 112
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ +
Sbjct: 113 KLQIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVN 170
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
KLLVGNK D R + + FA E G F+E SAK NVEQ F + I + +
Sbjct: 171 KLLVGNKSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMAS 230
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
G++ + P A GCCS+
Sbjct: 231 QPAGNNARPPTVQIRGQPV--AQKNGCCST 258
>gi|383859431|ref|XP_003705198.1| PREDICTED: uncharacterized protein LOC100882595 [Megachile
rotundata]
Length = 1878
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D ++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKCDLHIKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 133/201 (66%), Gaps = 6/201 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F+N+ W +EID Y++ ++ KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQ-WLQEIDRYAS-ENVNKLLVGNKS 126
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D E+++VV ++A + G FLE SAK NVEQ F + +I + + S
Sbjct: 127 DMETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASPDN 186
Query: 190 KKNI-FKESPPQNDASTTGCC 209
K ++ S P + GCC
Sbjct: 187 KPSVKINASNPVKQSG--GCC 205
>gi|328849559|gb|EGF98737.1| hypothetical protein MELLADRAFT_73536 [Melampsora larici-populina
98AG31]
Length = 204
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 110/205 (53%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D+LF+LLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDFLFQLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKVVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +DTFTN+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLQEIDRYAC-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D ++VV DFA + FLE SAK NVEQ F + +I D T S +
Sbjct: 122 KSDLTQKKVVEYTVAKDFADQLSIPFLETSAKNSTNVEQAFLTMAKQIKDRTGSAPVNAT 181
Query: 187 SGVKKNIFKESPPQN--DASTTGCC 209
S K K QN ++GCC
Sbjct: 182 SN--KATLKVGSSQNVQQPQSSGCC 204
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 133/209 (63%), Gaps = 8/209 (3%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQ++DYLFKLLLIG+S VGKS+LLL F+ + F E PTIGVDFKI+ + GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+TSSYY+GA GII+VYD+T R TF ++ D W E D + N++ IKLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVIKLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK+D E++R VS EG + A G F+E SA T NVE F L +I+ S+
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQKSSDN 181
Query: 186 SSG-----VKKNIFKESPPQNDASTTGCC 209
+ G K I N GCC
Sbjct: 182 NKGGNQASGKTRIRAGEDINNIKKQGGCC 210
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + P N S GCCSS
Sbjct: 180 GSKPPTVQIRGQPVNQQS--GCCSS 202
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++RVVS +FA G FLE SAK NVE+ F + +I ++
Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI---KKRMANAPV 178
Query: 188 GVKKNIFKESPPQNDASTTG--CC 209
K + K +P Q S G CC
Sbjct: 179 APKAGV-KLTPGQQVPSNGGSKCC 201
>gi|359318893|ref|XP_848769.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Canis lupus
familiaris]
Length = 236
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 129/199 (64%), Gaps = 33/199 (16%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIW------ 66
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIW
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWFLFWGC 68
Query: 67 ------------------------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 102
TAGQERFRTLT SYYRGA G+I+VYDVTRRDTF
Sbjct: 69 KLLIYSTYSSSYYSSLYFGQEKKVGTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTFVK 128
Query: 103 LADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRV 162
L D W E++ Y T D + +LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 129 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 186
Query: 163 NVEQCFEELVLKILDTPSL 181
V+ FEELV KI+ TP L
Sbjct: 187 GVQCAFEELVEKIIQTPGL 205
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 136/207 (65%), Gaps = 15/207 (7%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
QEFDYLFK+L+IGDSGVGKS LLL F+ D F + TIGVDFKIK + + G+ +KL IW
Sbjct: 3 QEFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT +F ++ W EI+ + + + +K+L+G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQ-WLNEIE-GNASPNVVKMLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD----TPSLL 182
NK DK++ + VS ++ +FA++ G F E SAK +NVE F EL I + TP +
Sbjct: 121 NKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELAQDIKNQMKETPRVT 180
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ + +K + +E P GCC
Sbjct: 181 PD-NVAIKPEVQQEPQP-------GCC 199
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 59 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 118
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 119 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 176
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D + +VVS + G FA E G F+E AK NVEQ F + I
Sbjct: 177 KSDLTANKVVSYETGKAFADEIGIPFMETGAKNATNVEQAFMAMAADI 224
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 134/209 (64%), Gaps = 17/209 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +++VV + FA E G FLE SAK NVEQ F E+ ++ PS+ +
Sbjct: 122 KCDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSA 181
Query: 184 EGSSGV--KKNIFKESPPQNDASTTGCCS 210
+ + + + + P CCS
Sbjct: 182 AKPTTIPLRGQVLQHKP--------NCCS 202
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGNK
Sbjct: 135 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 192
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D + +VV+ + FA E G F+E SAK +NVEQ F + I D + ++
Sbjct: 193 DLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANAR 252
Query: 190 KKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 253 PATVQIRGQPVN--QKTSCCSS 272
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 133/207 (64%), Gaps = 5/207 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFK+LLIGDSGVGK+ LL+ + ++F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKSYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+TSSYYRGA GI+++YD+T R TF N+ + L S + KLL
Sbjct: 62 IWDTAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNVQTWMNRTFSLASNEVE--KLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+ NK D RVVS +EG A EYG FLE SAK+ NV + FEEL IL S+
Sbjct: 120 IANKCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAILHNSSIRRH 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCSS 211
SS V + + + + P N S T CCS+
Sbjct: 180 ESSTVTQ-VHRLAEPPNSISGT-CCST 204
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 131/202 (64%), Gaps = 8/202 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LL+ F ++F E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V + ++FA+E+ FLE SAK +NVE F E+ +I + + + S
Sbjct: 122 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMPS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V N Q + GCC
Sbjct: 182 NVTVN-----STQPVTKSGGCC 198
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 138/207 (66%), Gaps = 8/207 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++++D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 25 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 84
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D K+L
Sbjct: 85 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 142
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A ++G FLE SAK + +++ F +L ILD + +E
Sbjct: 143 LGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNE 202
Query: 185 GSSGVKKNIFKESPPQNDAST--TGCC 209
G+K+ + + PQN+ + CC
Sbjct: 203 ---GMKQPTIRPAEPQNNVAIGRLSCC 226
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
S E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +
Sbjct: 35 SPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTI 94
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y++ ++
Sbjct: 95 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVN 152
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
KLLVGNK D + +VVS + G FA E G F+E SAK NV F + I
Sbjct: 153 KLLVGNKCDLTANKVVSYETGKAFADEIGIPFMETSAKNATNVXHAFMAMAADI 206
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 135/206 (65%), Gaps = 4/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +RVVSK+ G ARE+G F+E SAK+ +N+E+ F EL ILD + E
Sbjct: 120 LGNKCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTA-GRE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ ++ + + + CCS
Sbjct: 179 SAENPERVVVDRRNNEKAPAYKSCCS 204
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA FLE SAK NVEQ F + +I + G++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 188 --GVKKNIFKESPPQNDASTTGCC 209
G K N+ ES P S GCC
Sbjct: 179 TGGDKPNLKIESTPVRQ-SGGGCC 201
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 132/204 (64%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + + ++
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKER---MGTTTA 178
Query: 188 GVKKNIFKESPPQNDASTT--GCC 209
+K + P QN +S+ GCC
Sbjct: 179 NNEKRSVQVGPGQNVSSSPSGGCC 202
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 131/209 (62%), Gaps = 18/209 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D SER VS FA E G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD--RMASQPTN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCS 210
+ PP Q +GCCS
Sbjct: 180 NAR-------PPTVQIRGQPVGQKSGCCS 201
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 119
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 120 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 179
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 180 KSNVKIQSTPVKQ-SGGGCC 198
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 131/202 (64%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F + W EID Y+ N++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKG-WLNEIDRYA-NENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV FA E G F+E SAK NVEQ F + +I + + + ++
Sbjct: 122 KSDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEIKNRMASQPQMNA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N + ++ + + CC
Sbjct: 182 GPRGNTVRPGEGRSVNAKSSCC 203
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 186 bits (473), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS ++G ARE+G F+E SAK +N+++ F EL ILD
Sbjct: 120 LGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 179 KSNVKIQSTPVKQ-SGGGCC 197
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS +FA + G F+E SAK NVE F + I D + S+ S+
Sbjct: 122 KSDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKD--RMASQPSA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ + Q GCCSS
Sbjct: 180 NNARPPTVQIRGQPVGQKGGCCSS 203
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 134/210 (63%), Gaps = 8/210 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
+T E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 ATMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA++ FLE SAK NVEQ F+++ I+ +
Sbjct: 120 LLVGNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM--ARMG 177
Query: 183 SEGSSGVK---KNIFKESPPQNDASTTGCC 209
G +K + S P +GCC
Sbjct: 178 PAGGEQIKSQGEGKINPSRPVEPNKGSGCC 207
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 106/205 (51%), Positives = 133/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +VVS + FA E G F+E SAK NVEQ F + +I + + S+ +
Sbjct: 122 KCDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPVN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N S GCCSS
Sbjct: 180 NARPPTVQIRGQPVNQKS--GCCSS 202
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 7 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 66
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 67 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 124
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 125 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 129/186 (69%), Gaps = 10/186 (5%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG++ VGKS+LLL F+ + + +E + TIGVDF++ + + G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV+ R+TF L W EI+ Y + ++++VGNK+DK
Sbjct: 80 ERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WFSEIETY-VSPTVVRIIVGNKLDK 137
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-----SEGS 186
E+ R V EG FA LFLE SAKT V V + FE++V ILDTP L S G
Sbjct: 138 ENSRQVPTSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTPELWAPVGSSSGQ 197
Query: 187 SGVKKN 192
S ++N
Sbjct: 198 SANQRN 203
>gi|289739869|gb|ADD18682.1| Rab protein 1 [Glossina morsitans morsitans]
Length = 205
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 139/210 (66%), Gaps = 10/210 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L K +K
Sbjct: 2 SAINPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDNKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EI+ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
LLVGNK D +++VV ++A + G FLE SAK+ NVEQ F + +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
S ++ +S VK I + P + ++ +GCC
Sbjct: 180 SSATDNTSKVK--IDQGRPVE--STKSGCC 205
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLHEIDRYAA-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++RVVS ++G +FA G FLE SAKT NVEQ F + +I
Sbjct: 122 KSDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQI 169
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V + FA E G F+E SAK NVEQ F + I + + G++
Sbjct: 122 KSDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P A GCCS+
Sbjct: 182 ARPPTVQIRGQPM--AQKNGCCST 203
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASDS-VNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R V + FA E G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKD--RMASQPAA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ + Q GCCSS
Sbjct: 180 NNARPPTVQIRGQPVPQKNGCCSS 203
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV + FA E G FLE SAK NVEQ F + +I
Sbjct: 122 KSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 135/209 (64%), Gaps = 9/209 (4%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
++ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +
Sbjct: 8 AAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTI 67
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++
Sbjct: 68 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVN 125
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
KLLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 126 KLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKR 182
Query: 182 LSEG--SSGVKKNIFKESPPQNDASTTGC 208
+ G S G + N+ +S P A GC
Sbjct: 183 MGPGAASGGERPNLKIDSTPVKPAG-GGC 210
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 130/203 (64%), Gaps = 6/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E SAK NVEQ F + +I + + S+
Sbjct: 122 KSDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSA 181
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
+ P A GCCS
Sbjct: 182 RPATVQIRGQPVNQKA---GCCS 201
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 13/207 (6%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
++DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
NK D +VV + FA E G FLE SAK +NVEQ F E+ K+ + P+
Sbjct: 121 NKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPNAT 180
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ SS V+ K P Q +++ CC
Sbjct: 181 ARSSSTVQ---MKGQPIQQNSN---CC 201
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGS 186
K D ++ V ++ FA E G FLE SAK NVEQ F + ++ S L+EG+
Sbjct: 122 KCDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGN 181
Query: 187 SGVKKNIFKESPPQNDASTTGCCS 210
K P Q GCCS
Sbjct: 182 RKANTVEMKGQPLQQKG---GCCS 202
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/206 (50%), Positives = 137/206 (66%), Gaps = 9/206 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+V+DVT +++F+N+ +W +EID Y++ C KL+VGN
Sbjct: 66 TAGQERFRTITSSYYRGANGIIIVFDVTDQESFSNVK-VWLQEIDRYASTNVC-KLMVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL----DTPSLLS 183
K D +++VV +FA + FLE SAK NVEQ F + +I + P+
Sbjct: 124 KCDLTNKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKKVQGNEPAPGG 183
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
G + VK I + P ++ ++ G C
Sbjct: 184 GGGTNVK--ITQSQPIKDKPNSGGGC 207
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS ++G ARE+G F+E SAK +N+++ F EL ILD
Sbjct: 120 LGNKSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 124/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ + F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS ++G ARE+G F+E SAK +N++Q F EL ILD
Sbjct: 120 LGNKSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELAEAILD 172
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 126/168 (75%), Gaps = 3/168 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKK 60
+SS+ Q+++DYLFKL+LIGDSGVGKS LLL F D F E TIGVDF+ + V + K
Sbjct: 4 SSSSKQRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKT 63
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRT+TS+YYRGA GIIMV+DVT D+F ++ D W KE++ Y+ +
Sbjct: 64 VKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVND-WLKEVNRYAA-EGT 121
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
+KLLVGNK D+ ++RVV++++ +FA E G F+E SAK+ NVE+ F
Sbjct: 122 VKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAF 169
>gi|390346096|ref|XP_781611.3| PREDICTED: ras-related protein Rab-1A isoform 2 [Strongylocentrotus
purpuratus]
Length = 212
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/209 (51%), Positives = 135/209 (64%), Gaps = 8/209 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
T+ DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 9 TALSYIDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKL 68
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KL
Sbjct: 69 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKL 126
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSL 181
LVGNK D +++VV ++A + FLE SAK NVEQ F + +I + P
Sbjct: 127 LVGNKCDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGS 186
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCCS 210
+ GSS K N S S +GCCS
Sbjct: 187 VPSGSSHDKIN---PSTTPVKPSGSGCCS 212
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E RVVS ++G ARE+G F+E SAK +N+++ F EL ILD
Sbjct: 120 LGNKSDMEERRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 131/207 (63%), Gaps = 13/207 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D + R V FA E G FLE SAK NVEQ F E+ ++ P++ S
Sbjct: 122 KCDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNS 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ V+ K P +GCCS
Sbjct: 182 SRPATVQ---MKGQPV---VQKSGCCS 202
>gi|91087113|ref|XP_975150.1| PREDICTED: similar to Rab-protein 1 CG3320-PA [Tribolium castaneum]
gi|270010550|gb|EFA06998.1| hypothetical protein TcasGA2_TC009965 [Tribolium castaneum]
Length = 202
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 137/205 (66%), Gaps = 10/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T +D+F N+ W +EID Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQ-WLEEIDRYACD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +++VV ++A + G FLE SAK NVEQ F + +I + PS ++
Sbjct: 122 KSDLTTKKVVDYTTAKEYADQLGIPFLETSAKNASNVEQAFMTMAAEIKNRVGPPSSAAD 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+S VK I + P + + +GCC
Sbjct: 182 QASKVK--IDQGRPIE--TTKSGCC 202
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 130/205 (63%), Gaps = 10/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++TF N+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQ-WLQEIDRYAC-ESVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +++VV +FA G FLE SAK NVEQ F + +I + P ++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPPQTTAD 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
S V K P S GCC
Sbjct: 182 RSEKVP---LKSGSPVK-PSGGGCC 202
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S+R V ++A G FLE SAK NVEQ F + +I + +++ +
Sbjct: 122 KSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEI---KARMAQAPA 178
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + + + ++ + GCC
Sbjct: 179 GKEGSASIQVGKGSEVTKKGCC 200
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 135/206 (65%), Gaps = 4/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +RVV+K+ G ARE+G F+E SAK+ +N+E+ F EL ILD S E
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ ++ I + + CC+
Sbjct: 179 SAENQERVIIDRRNQEKAPGYSKCCA 204
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 129/200 (64%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 126
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 186
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P S GCC
Sbjct: 187 KSNVKIQSTPVKQ-SGGGCC 205
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGNK
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGNKC 128
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV ++A + G FLE SAK +NVEQ F + +I S G+S
Sbjct: 129 DLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP 188
Query: 190 KKNIFKESPPQNDASTTGCC 209
+ E ++S +GCC
Sbjct: 189 ANKVKIEHGRPIESSKSGCC 208
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 186 bits (471), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 133/204 (65%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV + +FA G FLE SAK NVEQ F + +I + S ++
Sbjct: 122 KSDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG-SSIATN 180
Query: 188 GVKKNIFKESPPQ--NDASTTGCC 209
K N+ SP Q ++ + GCC
Sbjct: 181 NTKANV-NVSPGQGVSNNQSGGCC 203
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 130/202 (64%), Gaps = 3/202 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQER RT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDAS 204
+ K N+ +S P +S
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSS 201
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + S+ +
Sbjct: 122 KCDLTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPVN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N + GCCS+
Sbjct: 180 NARPPTVQIRGQPVNQKA--GCCST 202
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 137/205 (66%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+A W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +R VSK++G ARE+G F+E SAK +N+E F EL IL T + E
Sbjct: 120 LGNKCDVEDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAIL-TKTCGRE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ + + + S +ND + CC
Sbjct: 179 QAEPLDRVPLEGS--RNDRQSNRCC 201
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 133/205 (64%), Gaps = 7/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N+ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +R++ K+ G ARE+G FLE SAK+ VNVE+ F L IL
Sbjct: 120 LGNKCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDS 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
++ KE+ + +GCC
Sbjct: 180 NPDSSSVSVHKETSSRK----SGCC 200
>gi|307187151|gb|EFN72394.1| Ras-related protein Rab-1A [Camponotus floridanus]
Length = 208
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 104/200 (52%), Positives = 131/200 (65%), Gaps = 3/200 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYD T ++TF N+ W +EID Y+ + + KLLVGNK
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGNKC 128
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV ++A + G FLE SAK +NVEQ F + +I S G+S
Sbjct: 129 DLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDP 188
Query: 190 KKNIFKESPPQNDASTTGCC 209
+ E ++S +GCC
Sbjct: 189 ANKVKIEHGRPIESSKSGCC 208
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 134/212 (63%), Gaps = 8/212 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ + + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIDRYACD-NVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK +NVEQ F + +I
Sbjct: 120 LLVGNKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPP 179
Query: 183 SEGSSGVKKNIFKESPPQND-----ASTTGCC 209
S G+S + + D S +GCC
Sbjct: 180 SSGASDQTSKLKIDQGHNIDTSGIQGSKSGCC 211
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E+ R VS + FA E G F+E SAK NVEQ F + I
Sbjct: 122 KCDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI 169
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 186 bits (471), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 101/193 (52%), Positives = 131/193 (67%), Gaps = 5/193 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV FA G FLE SAK+ NVEQ F + +I + ++
Sbjct: 122 KCDLTTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMAAEI--KKRMGPGATA 179
Query: 188 GVKKNIFKESPPQ 200
G + + +++P Q
Sbjct: 180 GGLREVQRQNPEQ 192
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 133/210 (63%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS + FA E G F+E SAK NVEQ F + I + + S+ ++
Sbjct: 122 KSDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKN--RMASQPAN 179
Query: 188 GVKKNIFKESPPQNDAS------TTGCCSS 211
+ PP + S ++GCCSS
Sbjct: 180 NAR-------PPTVNISGKPVGQSSGCCSS 202
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R + + FA E G F+E SAK NVEQ F + I + + G++
Sbjct: 122 KSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P A GCCS+
Sbjct: 182 ARPPTVQIRGQPV--AQKNGCCST 203
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 102/184 (55%), Positives = 124/184 (67%), Gaps = 7/184 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ N K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +++VV +FA + G FLE SAK NVEQ F E+ ++ P+ S
Sbjct: 122 KCDLTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQAPAPKS 181
Query: 184 EGSS 187
G S
Sbjct: 182 GGQS 185
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 104/198 (52%), Positives = 131/198 (66%), Gaps = 8/198 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDA 203
S G + N+ +S P A
Sbjct: 179 SGGERPNLKIDSTPVKQA 196
>gi|178056588|ref|NP_001116645.1| ras-related protein Rab-1B [Sus scrofa]
gi|122064946|sp|Q06AU7.1|RAB1B_PIG RecName: Full=Ras-related protein Rab-1B
gi|115394758|gb|ABI97173.1| RAB1B [Sus scrofa]
Length = 201
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 133/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQER RT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKQAG-GGCC 201
>gi|296817263|ref|XP_002848968.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|327301503|ref|XP_003235444.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|238839421|gb|EEQ29083.1| GTP-binding protein ypt1 [Arthroderma otae CBS 113480]
gi|326462796|gb|EGD88249.1| GTP-binding protein ypt1 [Trichophyton rubrum CBS 118892]
gi|326468927|gb|EGD92936.1| GTP-binding protein ypt1 [Trichophyton tonsurans CBS 112818]
gi|326480093|gb|EGE04103.1| Ras family protein [Trichophyton equinum CBS 127.97]
Length = 201
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T Q KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-QGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 134/206 (65%), Gaps = 4/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +RVVSK+ G ARE+ F+E SAK+ +N+E+ F EL ILD S E
Sbjct: 120 LGNKCDMSDKRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ ++ + S + CC+
Sbjct: 179 SAENPERVVIDRGNSDKATSYSKCCA 204
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 126/176 (71%), Gaps = 5/176 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 74
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y + +K++VGNKVDK
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFDALPK-WFSELETY-VSSSVVKIIVGNKVDK 132
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
E R VS EG FA LF+E SAKT V V++ F ++V +I+DTP L G++
Sbjct: 133 EYSRQVSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVERIMDTPELWQTGAA 188
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 134/205 (65%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I + + S+ +
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKN--RMASQPVN 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + P N + GCCS+
Sbjct: 180 NARPPTVQIRGQPVNQKA--GCCST 202
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+GNK D +RVVSK+ G ARE+G F+E SAK+ +N+E+ F EL ILD S
Sbjct: 120 LGNKCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS 175
>gi|158291520|ref|XP_313029.4| AGAP004146-PA [Anopheles gambiae str. PEST]
gi|157017587|gb|EAA08609.4| AGAP004146-PA [Anopheles gambiae str. PEST]
Length = 201
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 134/205 (65%), Gaps = 11/205 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T D+F N+ W +EI+ Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDHDSFENVKQ-WLEEIERYACD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D ++++ V ++ A + G FLE SAK NVEQ F + +I + PS ++
Sbjct: 122 KCDLQTKKRVDTTTAMELANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPSSAAD 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
S VK + +N + +GCC
Sbjct: 182 PPSAVKID-----KGRNVEAKSGCC 201
>gi|195998505|ref|XP_002109121.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
gi|190589897|gb|EDV29919.1| GTP-binding protein o-rab1 [Trichoplax adhaerens]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 132/204 (64%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D+LFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQVSFNNVKQ-WLQEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D S++V+ ++A FLE SAK NVEQ F + +I PS +
Sbjct: 122 KCDLTSKKVIDYVTAKEYADALDIPFLETSAKNATNVEQAFLTMAAEIKKRMGPSSAASA 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+G N+ +S P D + GCC
Sbjct: 182 PTG---NVKIQSKPVADNKSGGCC 202
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 9/202 (4%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 120
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG--SS 187
D +++VV +FA G FLE SAK NVEQ F + +I + G S
Sbjct: 121 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAASG 177
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 178 GERPNLKIDSTPVKPAG-GGCC 198
>gi|112983246|ref|NP_001037010.1| small GTP-binding protein [Bombyx mori]
gi|2338554|gb|AAB67169.1| small GTP-binding protein [Bombyx mori]
Length = 202
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T +D+F+N+ W +EID Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +A + G FLE SAK NVEQ F + +I S G++
Sbjct: 122 KCDLTTKKVVDFSTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEIKARVGPPSTGAA 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ P D + CC
Sbjct: 182 PAGHVKIDQGQPI-DTGKSSCC 202
>gi|426252524|ref|XP_004019959.1| PREDICTED: ras-related protein Rab-1B [Ovis aries]
Length = 332
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 130/200 (65%), Gaps = 5/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 137 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 196
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 197 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 254
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I S G
Sbjct: 255 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-PGAASGGE 313
Query: 190 KKNIFKESPPQNDASTTGCC 209
+ N+ +S P A GCC
Sbjct: 314 RPNLKIDSTPVKQAG-GGCC 332
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 135/209 (64%), Gaps = 8/209 (3%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQ++DYLFKLLLIG+S VGKS+LLL F+ + F E PTIGVDFKI+ + GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+TSSYY+GA GII+VYD+T R TF ++ D W E D + N++ +KLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVVKLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSL 181
GNK+D E++R VS EG + A G F+E SA T NVE F E+ ++ T
Sbjct: 122 GNKIDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLATEIKSRVQKTTDN 181
Query: 182 LSEGSSGVKKNIFKESPPQN-DASTTGCC 209
+ ++G K K N S GCC
Sbjct: 182 KNNNAAGQGKTKIKAGEDINKKKSQGGCC 210
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 128/206 (62%), Gaps = 7/206 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLA 64
S E+DYLFKLL+IGDS VGKS LLL F D++++ TIGVDFKI+ V L GK KL
Sbjct: 2 SSNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N KLL
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQ-WLHEIDRYA-NHSVSKLL 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNK D ++V FA E G FLE SAK +NVEQ F + +I +
Sbjct: 120 VGNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPT 179
Query: 185 GSSGVKKNI-FKESPPQNDASTTGCC 209
GS +++ K P Q + T CC
Sbjct: 180 GSKSAAESVQMKGQPIQQN---TNCC 202
>gi|7533034|gb|AAF63333.1|AF244545_1 YptA [Aspergillus awamori]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 101/168 (60%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 126/203 (62%), Gaps = 8/203 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +VV + FA E G FLE SAK +NVEQ F + +I GS
Sbjct: 122 KSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTGSK 181
Query: 188 GVKKNIFKESP-PQNDASTTGCC 209
+ K P PQ + CC
Sbjct: 182 SAETVQMKGQPIPQK----SNCC 200
>gi|348544653|ref|XP_003459795.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
gi|410906535|ref|XP_003966747.1| PREDICTED: ras-related protein Rab-1A-like [Takifugu rubripes]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA FLE SAK NVEQ F + +I + G++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAT 178
Query: 188 --GVKKNIFKESPPQNDASTTGCC 209
G K N+ +S P S GCC
Sbjct: 179 AGGDKPNLKIDSTPVRQ-SGGGCC 201
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/200 (52%), Positives = 130/200 (65%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 133 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 192
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGNK
Sbjct: 193 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 250
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D +++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 251 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 310
Query: 190 KKNIFKESPPQNDASTTGCC 209
K N+ +S P S+ GCC
Sbjct: 311 KSNVKIQSTPVKQ-SSGGCC 329
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/202 (52%), Positives = 132/202 (65%), Gaps = 9/202 (4%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 118
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG--SS 187
D +++VV +FA G FLE SAK NVEQ F + +I + G S
Sbjct: 119 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAASG 175
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 176 GERPNLKIDSTPVKPAG-GGCC 196
>gi|331234359|ref|XP_003329839.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308829|gb|EFP85420.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 236
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 122/172 (70%), Gaps = 5/172 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
KLLLIG S VGKS+LLL FT F EE S TIGVDFK K + GK+ KL+IWDTAG
Sbjct: 31 LKLLLIGSSSVGKSSLLLRFTDQVFLSAEESSATIGVDFKFKLIDHKGKRYKLSIWDTAG 90
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYS-TNQDCIKLLVGNKV 129
QERFRTLTSSYYRGAQG+++VYDVT R +F +L W E+D ++ + QD ++++VGNKV
Sbjct: 91 QERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPS-WFSELDTFAHSPQDVVRVIVGNKV 149
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
DK+ R VS EG FA + +F E S KTR V++ FE +V KI+D+ SL
Sbjct: 150 DKDESRTVSTDEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIIDSISL 201
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 134/206 (65%), Gaps = 4/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +RVVSK+ G ARE+G F+E SAK+ +N+E+ F EL ILD S E
Sbjct: 120 LGNKCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTS-GRE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ ++ + + CC+
Sbjct: 179 SAENPERVVIDRANSDKAPGYNKCCA 204
>gi|332373844|gb|AEE62063.1| unknown [Dendroctonus ponderosae]
Length = 202
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 135/203 (66%), Gaps = 6/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T +D+F N+ W +EI+ Y+ + + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDCTDQDSFNNVKQ-WLEEIERYACD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGS 186
K D +++VV + ++A + FLE SAK+ NVEQ F + I L S G
Sbjct: 122 KSDLTTKKVVDYQTAKEYASQLHIPFLETSAKSATNVEQAFMTMAAHIKLRVGPQTSMGD 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
G K F +S P +++ +GCC
Sbjct: 182 QGGKVK-FDQSRPV-ESTKSGCC 202
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + +S
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMA-SQPAAS 180
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
G + + Q + + CCS
Sbjct: 181 GASRPATVQMRGQPVSQQSSCCS 203
>gi|116199373|ref|XP_001225498.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
gi|88179121|gb|EAQ86589.1| GTP-binding protein ypt1 [Chaetomium globosum CBS 148.51]
Length = 203
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 131/204 (64%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + S ++
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG-SSIATN 180
Query: 188 GVKKNIFKESPPQNDAS--TTGCC 209
K N+ +P Q +S GCC
Sbjct: 181 NTKANV-NVAPGQGVSSNNNNGCC 203
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 133/204 (65%), Gaps = 6/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK+ NVE+ F + +I + + ++
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMA-TQPMNN 180
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N S GCCSS
Sbjct: 181 ARPPTVNIRGQPVNQKS--GCCSS 202
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++FTN+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVK-TWLQEIDRYAST-NVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI--LDTPSLLSEG 185
K D +++VV +FA + FLE SAK NVEQ F + +I P
Sbjct: 122 KCDLTNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEIKRAQGPDNGHVT 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
G I S P GCC
Sbjct: 182 PGGNTVRITPSSQPLQQDKKKGCC 205
>gi|413942419|gb|AFW75068.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
gi|413942420|gb|AFW75069.1| hypothetical protein ZEAMMB73_080599 [Zea mays]
Length = 205
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 106/212 (50%), Positives = 135/212 (63%), Gaps = 13/212 (6%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
T+ E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ + L GK +KL
Sbjct: 2 TTSIEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDTYISTIGVDFKIRTIDLDGKTVKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KL 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTP 179
LVGNK D +VV ++ DFA G F+E SAK +NVE+ F E+ ++ P
Sbjct: 120 LVGNKCDLVDSKVVDTEKAKDFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQP 179
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
++ + V K P Q +S CCSS
Sbjct: 180 TVERRPTVHVH---MKGQPIQQKSS---CCSS 205
>gi|1370168|emb|CAA98161.1| RAB1D [Lotus japonicus]
Length = 203
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFGDDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS +FA + G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
G + P S GCCSS
Sbjct: 182 GRPPTVQIRGQPVGQKS--GCCSS 203
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 140/218 (64%), Gaps = 9/218 (4%)
Query: 1 MASST--SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG 57
MA++T ++ ++DYL KLLLIGDSGVGKS LLL FT D+F TIG+DFKI+ L
Sbjct: 1 MAAATGRARADYDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELD 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERFRT+T++YYR A GI++VYDVT +F N+ + W K I+ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD 119
Query: 118 QDCIKLLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VL 173
+ K+LVGNK D ES+R VS G + A EYG F E SAKT +NVEQ F + ++
Sbjct: 120 -NVNKILVGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIM 178
Query: 174 KILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
K L + N P + +S + CCSS
Sbjct: 179 KRLSETDFRPAPQTITINNPNTAEGPASASSKSRCCSS 216
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D+LFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++FT++ W +EID Y++ + KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQ-WLQEIDRYAS-EGVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VV +FA + FLE SAK NVEQ F + +I D S S
Sbjct: 123 KSDLTSKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSTPSG 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + + CC
Sbjct: 183 AAKSSTVTPGQTVQSQQSGSCC 204
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 108/206 (52%), Positives = 130/206 (63%), Gaps = 12/206 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSE 184
K D +VV + FA E G FLE SAK NVEQ F + +I + + S+
Sbjct: 122 KCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSK 181
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
S V+ K P Q +S CCS
Sbjct: 182 SSGNVQ---MKGQPIQQKSS---CCS 201
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 123 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|325303620|tpg|DAA34562.1| TPA_exp: RAS oncogene family member RAB1 [Amblyomma variegatum]
Length = 206
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 131/209 (62%), Gaps = 7/209 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
+T E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 TTMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PS 180
LLVGNK D +++VV +FA + G FLE SAK NVEQ F + + + P
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADQLGIPFLETSAKNATNVEQAFMTMAAENKNRMGPP 179
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
G I +P Q S GCC
Sbjct: 180 TTEANLRGGDGKINPGTPVQPRGS--GCC 206
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKK 60
A + ++ +D LFKLLLIGDSGVGK+ +L + DTF TIG+DFKIK + L GK+
Sbjct: 3 AQAVPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEGKR 62
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERF T+T+SYYRGA GII+VYD+T + +F N+ W + I+++++ D
Sbjct: 63 IKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITK-WLQNIEMHAS-ADV 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
++L+GNK D E+ RVV K G A G FLE SAKT N+E+ FE+L +IL
Sbjct: 121 ERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRKVP 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
E + + N K+S +D S+ CC
Sbjct: 181 AKKEDETVLDLNRSKKSTEDSDKSSK-CC 208
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 132/204 (64%), Gaps = 11/204 (5%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ DTF TIG+DFKIK L GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYR A GI++VYDVT +F N+A W + I ++ ++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLRNIQEHAA-EEVDKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RV+SK++G +REYG FLE SAKT VN+E+ F EL ILD + E
Sbjct: 120 LGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDRTPGIEE 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGC 208
+ PP N + C
Sbjct: 180 PRPSL--------PPPNVSGQPKC 195
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D+ FK+LLIGDSGVGKS LLL F D++ + TIGVDFKIK + L GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYD T +D+FTN+ W EID Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +E+VV + FA YG F+E SAK NVE+CF + I
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGK+ LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 7 SSMNPEYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 66
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 67 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 124
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 125 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ + F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF ++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+GNK D E +RVVSK+ G ARE+G F+E SAK+ N+E+ F EL ILD +
Sbjct: 120 LGNKCDMEDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILDKSA 175
>gi|281501032|pdb|3L0I|B Chain B, Complex Structure Of Sidm/drra With The Wild Type Rab1
gi|281501034|pdb|3L0I|D Chain D, Complex Structure Of Sidm/drra With The Wild Type Rab1
Length = 199
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/173 (57%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 24 SSXNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 83
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 84 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 141
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV +FA G FLE SAK NVEQ F +I
Sbjct: 142 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFXTXAAEI 194
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS +FA + G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
G + P S GCCSS
Sbjct: 182 GRPPTVQIRGQPVGPKS--GCCSS 203
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 133/202 (65%), Gaps = 9/202 (4%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 77 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 134
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS-- 187
D +++VV +FA G FLE SAK NVEQ F + +I + G++
Sbjct: 135 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAATG 191
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 192 GERPNLKIDSTPVKPAG-GGCC 212
>gi|320592964|gb|EFX05373.1| GTP-binding protein ypt1 [Grosmannia clavigera kw1407]
Length = 202
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 108/212 (50%), Positives = 129/212 (60%), Gaps = 24/212 (11%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD---------- 177
K D ++VV + +FA G FLE SAK NVEQ F + +I +
Sbjct: 122 KSDMSEKKVVDYQVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGSTATNNT 181
Query: 178 TPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
PS+ GV N S+ GCC
Sbjct: 182 KPSVQVGAGHGVSNN-----------SSGGCC 202
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 134/201 (66%), Gaps = 6/201 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D LFK+LLIGDSGVGKS LLL F DT+ + TIGVDFKIK + + K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILIGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+D +++R VS +EG + A FLE SAK NVEQ F+ + +I + L E
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQL--ENQQK 180
Query: 189 VKKNIFKESPPQNDASTTGCC 209
+ NI + P D + CC
Sbjct: 181 GRANINLNAKPIKD-NRKKCC 200
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 138/207 (66%), Gaps = 8/207 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++++D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A ++G FLE SAK + +++ F +L ILD + +E
Sbjct: 120 LGNKCDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNE 179
Query: 185 GSSGVKKNIFKESPPQNDAST--TGCC 209
G+K+ + + PQ++ + CC
Sbjct: 180 ---GMKQPTIRPAEPQSNVAIGRLSCC 203
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 2 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 119
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 124/169 (73%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS++L+ FT D F+ + + TIGVDFK K + + +KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSILVRFTEDNFDPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYR AQG I+VYDVT TF L + W E++ YST + +K++VGNK+DKE
Sbjct: 69 RFRTLTPSYYRDAQGAILVYDVTNYSTFAKL-ETWLNELETYSTKANIVKMIVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V+++E + FAR + L++E SAKTR V+ FEELV KI+ TP L
Sbjct: 128 N-REVNREEAMKFARRHQTLYIEASAKTRDGVQCAFEELVHKIIQTPGL 175
>gi|367054838|ref|XP_003657797.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
gi|347005063|gb|AEO71461.1| hypothetical protein THITE_2123838 [Thielavia terrestris NRRL 8126]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + S ++
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMG-SSIATN 180
Query: 188 GVKKNIFKESPPQ--NDASTTGCC 209
K N+ SP +++ + GCC
Sbjct: 181 NTKANV-NVSPGHGVSNSQSGGCC 203
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 136/202 (67%), Gaps = 7/202 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVAL-GGKKMKLAIWDTAGQ 71
FKLLLIGDSGVGKS+LL+ +T+D FE +LS TIGVDFK+KHV + G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTVPDGTKIKLSIWDTAGQ 71
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT + YRG+ + V+DV+ R++F +L + W +E+ YS N D IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVFDVSNRESFDHL-NSWMEELKTYSDNPDMIKLLVGNKIDN 130
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKK 191
S R +S++EG+ F+R Y + E SAKT V Q F ++V +I + L ++G
Sbjct: 131 IS-REISREEGLRFSRLYNMPYAETSAKTSEGVNQLFSDVVTRIYNHSELWNQGKKRANT 189
Query: 192 NIFKESP---PQNDASTTGCCS 210
N + ++ + + CCS
Sbjct: 190 NSSSRAHLTELEDKQTRSSCCS 211
>gi|164423490|ref|XP_963146.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|466171|sp|P33723.1|YPT1_NEUCR RecName: Full=GTP-binding protein ypt1
gi|262046|gb|AAB24564.1| NCYPT1 [Neurospora crassa]
gi|7981351|emb|CAB92031.1| GTP-binding protein ypt1 [Neurospora crassa]
gi|157070115|gb|EAA33910.2| GTP-binding protein ypt1 [Neurospora crassa OR74A]
gi|336468090|gb|EGO56253.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2508]
gi|350289669|gb|EGZ70894.1| small GTP-binding protein [Neurospora tetrasperma FGSC 2509]
gi|380095744|emb|CCC05790.1| putative GTP-binding protein ypt1 [Sordaria macrospora k-hell]
gi|384298|prf||1905382A small GTP-binding protein
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 131/203 (64%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D ++VV +FA G FLE SAK NVEQ F + +I + S ++ +
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+ N+ N++S GCC
Sbjct: 182 TKASVNVSPGHGVSNNSS-GGCC 203
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 134/210 (63%), Gaps = 8/210 (3%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S + ++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SFREDQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA++ FLE SAK NVEQ F+++ I+ +
Sbjct: 120 LLVGNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM--ARMG 177
Query: 183 SEGSSGVK---KNIFKESPPQNDASTTGCC 209
G +K + S P +GCC
Sbjct: 178 PAGGEQIKSQGEGKINPSRPVEPNKGSGCC 207
>gi|367035328|ref|XP_003666946.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
gi|347014219|gb|AEO61701.1| hypothetical protein MYCTH_84992 [Myceliophthora thermophila ATCC
42464]
Length = 203
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 130/203 (64%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D ++VV +FA G FLE SAK NVEQ F + +I + S ++ +
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+ N+ N+ S GCC
Sbjct: 182 TKANVNVAPGHGVSNNQS-GGCC 203
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 103/199 (51%), Positives = 126/199 (63%), Gaps = 18/199 (9%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VVS + FA E G F+E SAK NVEQ F + +I
Sbjct: 122 KCDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------ 169
Query: 188 GVKKNIFKESPPQNDASTT 206
KN P N AS +
Sbjct: 170 ---KNRMASQPVNNKASNS 185
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 132/208 (63%), Gaps = 9/208 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 7 DYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 66
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT TF N+ W +EI+ Y+ + KLLVGN
Sbjct: 67 TAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQ-WLQEIERYAC-EGVNKLLVGN 124
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D + + V + A E G FL+ SAK NVEQ F + +I D S + G
Sbjct: 125 KADLTNSKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVSAMQNG 184
Query: 186 SS-GVKKNIFKESPPQN---DASTTGCC 209
S+ G K+ K QN +++ GCC
Sbjct: 185 SAGGAGKSTLKVGQGQNVQASSNSGGCC 212
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/179 (54%), Positives = 124/179 (69%), Gaps = 6/179 (3%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 13 KLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMDVKGKKVKLSIWDTAGQ 72
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV+ R++F L W E++ Y + +K++VGNKVDK
Sbjct: 73 ERFRTITSSYYRGAQGIILVYDVSNRESFDALPR-WFSELETY-VSSSVVKIIVGNKVDK 130
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSSGV 189
E R V E FA CLF+E SAKT V V F +V +ILDTP L S GS V
Sbjct: 131 EYSRQVPTAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTPELWDSAGSKAV 189
>gi|212537905|ref|XP_002149108.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
gi|210068850|gb|EEA22941.1| aminopeptidase, putative [Talaromyces marneffei ATCC 18224]
Length = 1176
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/173 (57%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S + +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 974 SLTYHRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVK 1033
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + K
Sbjct: 1034 LQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNK 1091
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D E ++VV +FA G FLE SAK+ NVEQ F + +I
Sbjct: 1092 LLVGNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 1144
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 131/205 (63%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + P N S GC SS
Sbjct: 180 GSKPPTVQIRGQPVNQQS--GCASS 202
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 120/168 (71%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 21 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 80
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 81 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 138
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 139 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 186
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS + G ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 124/176 (70%), Gaps = 3/176 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+GNK D +RVV+K+ G ARE+G F+E SAK+ N+E+ F EL ILD S
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTS 175
>gi|390470849|ref|XP_002755601.2| PREDICTED: ras-related protein Rab-1B [Callithrix jacchus]
Length = 202
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/205 (52%), Positives = 134/205 (65%), Gaps = 10/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRR-DTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
TAGQERFRT+TSSYYRGA GII+VYDVT + +++ N+ W +EID Y++ ++ KLLVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQGESYANVKQ-WLQEIDRYAS-ENVNKLLVG 121
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG- 185
NK D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 NKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGA 178
Query: 186 -SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 ASGGERPNLKIDSTPVKPAG-GGCC 202
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E++R V+ +E FA G FLE SAK NVE+ F + +I
Sbjct: 122 KSDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQI 169
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/200 (53%), Positives = 128/200 (64%), Gaps = 4/200 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT R++F N+ + W EID Y+ + KLLVGNK
Sbjct: 94 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNKC 151
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D S+R V+ +EG +FA F+E SAK NVEQ F + +I + + S
Sbjct: 152 DLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQVNQQQSRPN 211
Query: 190 KKNIFKESPPQNDASTTGCC 209
S P S +GCC
Sbjct: 212 ANVRLGPSQPVRSVS-SGCC 230
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 127/177 (71%), Gaps = 4/177 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ LL F+ D F TIG+DFKIK V LGGKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N++ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPS 180
+GNK D E++R VSK G A+E+ FLE SAK +NVE+ F +L IL+ +PS
Sbjct: 120 LGNKCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAILNKSPS 176
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 135/201 (67%), Gaps = 6/201 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D LFK+LLIGDSGVGKS LLL F DT+ + TIGVDFKIK + + K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKVLIGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+D +++R VS +EG + A FLE SAK NVEQ F+ + +I + L ++
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLENQQKGR 182
Query: 189 VKKNIFKESPPQNDASTTGCC 209
V NI + P D + CC
Sbjct: 183 V--NINLNAKPIKD-NKKKCC 200
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 130/205 (63%), Gaps = 7/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK MKL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VVS + FA E G F+E S K +NV Q F + I D + ++
Sbjct: 122 KCDLTDKKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQPAANN 181
Query: 188 GVKKNI-FKESPPQNDASTTGCCSS 211
+ + P + S CCSS
Sbjct: 182 ARPATVQIRGQPVEQKGS---CCSS 203
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E RVVS + G ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A + G FLE SAK NVE+ F + +I + + +S
Sbjct: 122 KCDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMA-SQPAAS 180
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
G + + Q + + CCS
Sbjct: 181 GASRPATVQMRGQPVSQQSSCCS 203
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 134/205 (65%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A+++G F E SAK V+V+ F +L IL + + E
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAIL---AKMPE 176
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ PQ S+ GCC
Sbjct: 177 STDEQSRDTVNPVQPQRPGSSGGCC 201
>gi|367011297|ref|XP_003680149.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
gi|359747808|emb|CCE90938.1| hypothetical protein TDEL_0C00490 [Torulaspora delbrueckii]
Length = 208
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 106/207 (51%), Positives = 134/207 (64%), Gaps = 8/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS--LLSEG 185
K D E +RVV +FA FLE SA NVEQ F + +I D+ + +G
Sbjct: 122 KCDLEDKRVVEYDVAREFAEANKMPFLETSALDSTNVEQAFLTMAKQIKDSMAQQHARDG 181
Query: 186 SSGVKK---NIFKESPPQNDASTTGCC 209
S K N+ + + + GCC
Sbjct: 182 GSNAKDDQGNVNLKGQSLTNNAGNGCC 208
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/170 (58%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
K D SER S FA E G F+E SAK NVEQ F + I D
Sbjct: 122 KCDLTSERAASYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD 171
>gi|307189424|gb|EFN73834.1| Ras-related protein Rab-18 [Camponotus floridanus]
Length = 224
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 128/187 (68%), Gaps = 3/187 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q++ + K+L+IG+S VGKS++LL FT D F E + T+G+D+K K + + G +KLAI
Sbjct: 3 QEDVLTILKILIIGESNVGKSSILLRFTEDEFCENMQSTVGMDYKTKQITIDGNTVKLAI 62
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 63 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNRTDIVKMVV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK+D + R VS +EG+ FAR + L++E SAKT V+ CFEELV KI+ TP L
Sbjct: 122 GNKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTH 180
Query: 186 SSGVKKN 192
S+ + N
Sbjct: 181 STRLYDN 187
>gi|320167737|gb|EFW44636.1| RAB1 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLQEIDRYAS-ETVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA + FLE SAK NVEQ F + +I
Sbjct: 122 KSDLTTKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 126/206 (61%), Gaps = 5/206 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDTVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V +A E G FLE SAK +NVE+ F + I ++ +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARSQAALE 181
Query: 188 GVKKNI--FKESPPQNDASTTGCCSS 211
NI K P Q + + CCS+
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCCST 207
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 99/195 (50%), Positives = 131/195 (67%), Gaps = 11/195 (5%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ DTF TIG+DFKIK L GKK+KL
Sbjct: 2 AKKSYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYR A GI++VYDVT +F N+A W + I ++ ++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLQNIQEHAA-EEVDKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD------- 177
+GNK D E +RV+SK++G +REYG FLE SAKT VN+E+ F +L IL+
Sbjct: 120 LGNKCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPGVEE 179
Query: 178 -TPSLLSEGSSGVKK 191
PSL SSG K
Sbjct: 180 PRPSLPPPNSSGQPK 194
>gi|440638868|gb|ELR08787.1| GTP-binding protein ypt1 [Geomyces destructans 20631-21]
Length = 201
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 107/211 (50%), Positives = 128/211 (60%), Gaps = 23/211 (10%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL---------DT 178
K D ++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNK 181
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P++ G GV+ S GCC
Sbjct: 182 PTVQVTGGQGVQS-----------GSAGGCC 201
>gi|307214891|gb|EFN89759.1| Ras-related protein Rab-18 [Harpegnathos saltator]
Length = 223
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 129/187 (68%), Gaps = 3/187 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q+++ + K+L+IG+S VGKS++LL FT D F E + T+G+D+K K +++ G +KLAI
Sbjct: 3 QEDYLTILKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQISIDGNIVKLAI 62
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 63 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK+D + R VS +EG+ FAR + L++E SAKT V+ CFEELV KI+ TP L
Sbjct: 122 GNKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTH 180
Query: 186 SSGVKKN 192
S+ N
Sbjct: 181 SARFYDN 187
>gi|242807972|ref|XP_002485067.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
gi|218715692|gb|EED15114.1| secretion related GTPase SrgB/Ypt1 [Talaromyces stipitatus ATCC
10500]
Length = 201
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++VV +FA G FLE SAK+ NVEQ F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 169
>gi|402881745|ref|XP_003904425.1| PREDICTED: ras-related protein Rab-1B-like [Papio anubis]
Length = 201
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERF+T+TSSYY GA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFQTITSSYYLGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I S
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI-KKRMWPGAASG 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 181 GERPNLKIDSTPVKPAG-GGCC 201
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 96/198 (48%), Positives = 135/198 (68%), Gaps = 8/198 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT D F+ E + TIGVDFK K + + G +KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTEDNFDPEQTLTIGVDFKTKKLNVEGNTVKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYR AQG I+V+DV + TF L + W E++ YST + +K+++GNK+D +
Sbjct: 69 RFRTLTPSYYRDAQGAILVFDVGSQATFAKL-ETWLNELETYSTKNNIVKMIIGNKIDVD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
R VS+++ + FAR + L++E SAKT+ V+ FEELV KI+ TP L +G N
Sbjct: 128 -HREVSREQAMAFARRHQTLYIEASAKTKHGVQAAFEELVHKIIQTPGLWESYDAG---N 183
Query: 193 IFKESPPQNDASTTGCCS 210
I ++ ++ +GC +
Sbjct: 184 I--HVGTKDHSARSGCAA 199
>gi|147788167|emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
Length = 240
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 131/201 (65%), Gaps = 13/201 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
+D FK+LLIGDS VGKS+LL+SF S + E+L+PTIGVDFKIK + +GGK++KL IWDT
Sbjct: 53 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTG 112
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
+ T S ++ + V+ T + L+ W + DL + V K+
Sbjct: 113 AK---LTHLSKFFIFDGAMRFVH--TSGNFVPRLSIHW--KFDLEEGGE------VFYKL 159
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D ESERVVS++EGI A+E+GCLF ECSAKTR NVE+CFEEL LKI++ PSLL EGS+
Sbjct: 160 DLESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 219
Query: 190 KKNIFKESPPQNDASTTGCCS 210
K+NI K P T GCCS
Sbjct: 220 KRNILKPKPENQPPPTGGCCS 240
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 124/176 (70%), Gaps = 3/176 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+GNK D +RVV+K+ G ARE+G F+E SAK+ N+E+ F EL ILD S
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTS 175
>gi|346324592|gb|EGX94189.1| GTP-binding protein ypt1 [Cordyceps militaris CM01]
Length = 215
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 99/175 (56%), Positives = 119/175 (68%), Gaps = 3/175 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKK 60
A+ + + +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK
Sbjct: 10 ANQATARRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKT 69
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 70 VKLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGV 127
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
KLLVGNK D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 128 NKLLVGNKSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 182
>gi|145242842|ref|XP_001393994.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|146324048|ref|XP_747911.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|238503355|ref|XP_002382911.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|317148453|ref|XP_001822783.2| GTP-binding protein ypt1 [Aspergillus oryzae RIB40]
gi|11558649|emb|CAC17833.1| secretion related GTPase (SrgB) [Aspergillus niger]
gi|129556349|gb|EAL85873.2| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus Af293]
gi|134078551|emb|CAK40472.1| secretion related GTPase srgB-Aspergillus niger
gi|159126164|gb|EDP51280.1| secretion related GTPase SrgB/Ypt1 [Aspergillus fumigatus A1163]
gi|220691721|gb|EED48069.1| secretion related GTPase SrgB/Ypt1 [Aspergillus flavus NRRL3357]
gi|259481104|tpe|CBF74330.1| TPA: GTP-binding protein ypt1 (Broad) [Aspergillus nidulans FGSC
A4]
gi|391874458|gb|EIT83340.1| GTPase Rab1/YPT1, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 201
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|281202863|gb|EFA77065.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 130/204 (63%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R TF N+ W +EID ++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQ-WLQEIDRFAC-ESVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD--TPSLLSEG 185
K D +++VV FA G FLE SAK NVEQ F + +I + T S +
Sbjct: 122 KSDLVAKKVVDTNTAKSFADTLGIPFLETSAKQSTNVEQAFMTMATEIKNRLTASQPAPT 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+ G K +P Q + +GCC
Sbjct: 182 TGGAKVVPGSSAPIQ---TKSGCC 202
>gi|442755463|gb|JAA69891.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 253
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 98/173 (56%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +++F N+ W +EID Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LLVGNK D +++VV +FA FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKSDLTTKKVVDYTTAKEFADHLNIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 99/186 (53%), Positives = 127/186 (68%), Gaps = 4/186 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFK+L+IGDSGVGKS+LLL F+ DTF + TIGVDFKIK V + K +KL IWD
Sbjct: 75 EYDYLFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWD 134
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYY+GAQGII+VYDVT +++F N+ W +I+ Y+ K+LVGN
Sbjct: 135 TAGQERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKK-WLDDIEKYAA-PSVTKMLVGN 192
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K+D E+ R V + D+A F+E SAK NVE+ F L+ + L S + GS
Sbjct: 193 KIDVEANRQVKSQTAKDYATSQNMTFIESSAKESTNVERAF-LLMAESLKNSSKTTHGSG 251
Query: 188 GVKKNI 193
KKNI
Sbjct: 252 SAKKNI 257
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L K +KL
Sbjct: 5 SNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTIKLQ 64
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ + KLL
Sbjct: 65 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVNKLL 122
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLS 183
VGNK D +++VV ++A + G FLE SAK NVEQ F + +I + + +
Sbjct: 123 VGNKCDLTTKKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPVAA 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
G S I +P + GCC
Sbjct: 183 AGDSKPNVKINASTPVKQGGG--GCC 206
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 107/210 (50%), Positives = 131/210 (62%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYL KLLLIGDSGV KS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E+ R VS + FA G F+E SAK NVEQ F + I D + S+ ++
Sbjct: 122 KCDLEANRAVSYEAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASIKD--RMASQPAN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q A GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVAQKGGCCSS 202
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A+++G F E SAK V+V+ F +L IL + + +
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 176
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ PQ +S+ GCC
Sbjct: 177 STDEQSRDTVNPVQPQRQSSSGGCC 201
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 134/210 (63%), Gaps = 11/210 (5%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSE 184
GNK D +++V +FA FLE SA + NVEQ F + +I S +
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTSNTNS 179
Query: 185 GSSGVKK-----NIFKESPPQNDASTTGCC 209
G++G K N+ ES N +++ CC
Sbjct: 180 GNAGNAKGKSNVNLRGESLTSNQSNS--CC 207
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS G ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|345498195|ref|XP_003428175.1| PREDICTED: ras-related protein Rab-1A-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 132/208 (63%), Gaps = 8/208 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+E DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IW
Sbjct: 2 EEHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYD T +++F N+ W +EID Y+ + + KLLVG
Sbjct: 62 DTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIDRYACD-NVNKLLVG 119
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D +++VV ++A + G FLE SAK +NVEQ F + +I S G+
Sbjct: 120 NKSDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGA 179
Query: 187 SGVKKNIFKESPPQND-----ASTTGCC 209
S + + D S +GCC
Sbjct: 180 SDQTSKLKIDQGHNIDTSGIQGSKSGCC 207
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 135/205 (65%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 1 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 60
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D +K++
Sbjct: 61 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 118
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A+++G F E SAK V+V+ F +L IL + + +
Sbjct: 119 LGNKCDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 175
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ PQ +S+ GCC
Sbjct: 176 STDEQSRDTVNPVQPQRQSSSGGCC 200
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 130/201 (64%), Gaps = 4/201 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
FDYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWDT
Sbjct: 3 FDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GII+VYD++ +++F N+ W EI+ Y+ ++ KLLVGNK
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQ-WLLEIERYAC-ENVNKLLVGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D+ +ER V ++A + G FLE SAK NVEQ F + +I S ++G
Sbjct: 121 SDRTAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAFLTMAGEIKRRLSHAVGTAAG 180
Query: 189 VKKNIFKESPPQNDASTTGCC 209
+ + S P +GCC
Sbjct: 181 AQPGVRITSTPVQ-PQKSGCC 200
>gi|392559791|gb|EIW52975.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 227
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 123/170 (72%), Gaps = 5/170 (2%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E + TIGVDF++ + + K++KL+IWDTAGQ
Sbjct: 15 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESNATIGVDFRVHKMEVKSKRVKLSIWDTAGQ 74
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R++F L W E++ Y ++ +K++VGNKVDK
Sbjct: 75 ERFRTITSSYYRGAQGIILVYDVANRESFEALPR-WFSELETYVSSS-VVKIIVGNKVDK 132
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
E R VS EG FA G LF+E SAKT V VE F ++V +I+DTP L
Sbjct: 133 EYSRQVSTAEGQAFATRMGALFIEASAKTAVGVEDAFRDVVARIIDTPEL 182
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ + W + ID ++ N++ K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVN-WLRNIDEHA-NENVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E R VS + G ARE+G F+E SAK +N+++ F EL ILD
Sbjct: 120 LGNKSDMEDRREVSTERGEAIAREHGIRFMETSAKANINIDRAFRELAEAILD 172
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 129/207 (62%), Gaps = 6/207 (2%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F +T+ ++ TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSE 184
GNK D ++VV +FA FLE SA + NVEQ F + +I S
Sbjct: 120 GNKADLSDKKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQIKAQMTSNSGA 179
Query: 185 GSSG--VKKNIFKESPPQNDASTTGCC 209
G+SG K N+ + CC
Sbjct: 180 GASGGNAKSNVNLRGQSLTSNQSNSCC 206
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 106/208 (50%), Positives = 132/208 (63%), Gaps = 13/208 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D+F + TIGVDFKI+ V L GK +KL IWD
Sbjct: 6 EYDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KLLVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D +VV ++ FA G F+E SAK +NVE+ F E+ ++ P++
Sbjct: 124 KCDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVER 183
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ V K P Q +S CCSS
Sbjct: 184 RPTVHVH---MKGQPIQQKSS---CCSS 205
>gi|355783174|gb|EHH65095.1| Ras-related protein Rab-1B [Macaca fascicularis]
Length = 201
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 105/202 (51%), Positives = 131/202 (64%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSY RGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYCRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA G FLE SAK NVEQ F + +I S
Sbjct: 122 KSDLTTKKVVDNTTCQEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMG-PGAASG 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P A GCC
Sbjct: 181 GERPNLKIDSTPVKPAG-GGCC 201
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 117/161 (72%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ ++ TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ + W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-NQWLQEIDRYATS-GVMKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D ++VV +FA G FLE SA NVEQ F
Sbjct: 122 KCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAF 162
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 135/208 (64%), Gaps = 8/208 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T + +F N+A W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAK-WLRYIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL--DTPSLL 182
+GNK D E +RV+SK +G AR++ FLE SAK +N+E+ F +L IL T
Sbjct: 120 LGNKCDMELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQKQTSGRA 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCS 210
+ ++ N+ P + A CC
Sbjct: 180 VDAATSGGINV---GPRERPALGANCCH 204
>gi|358396151|gb|EHK45538.1| secretion-related small GTPase SRG2/YPT1 [Trichoderma atroviride
IMI 206040]
Length = 202
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D +VV + FA E G FLE SAK +NVEQ F
Sbjct: 121 NKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 129/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKL LIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS +FA + G F+E SAK NVE F + I D + S+ S+
Sbjct: 122 KSDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKD--RMASQPSA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ + Q +GCCSS
Sbjct: 180 NNARPPTVQIRGQPVGQKSGCCSS 203
>gi|121717600|ref|XP_001276098.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
gi|119404296|gb|EAW14672.1| rab15, 13, 10, 1, 35, 5, and [Aspergillus clavatus NRRL 1]
Length = 207
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 100/170 (58%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL I
Sbjct: 8 QPPYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQI 67
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLV
Sbjct: 68 WDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLV 125
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 126 GNKSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 175
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RVVS G ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDKRVVSTGRGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|388581092|gb|EIM21402.1| GTP-binding protein ypt1 [Wallemia sebi CBS 633.66]
Length = 205
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 131/203 (64%), Gaps = 4/203 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++D+LFKLLLIGDSGVGKS LLL F DT+ TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 DYDFLFKLLLIGDSGVGKSCLLLRFADDTYTSSYISTIGVDFKIRTIEIDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F +++ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDNESFDHVSQ-WLQEIDRYAC-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS- 186
K D ES++ V +FA + FLE SAK NVEQ F + I D S GS
Sbjct: 122 KNDLESKKSVEFNVAKEFAEQLNIPFLETSAKDSTNVEQAFLTMAKHIKDRMGTNSVGSG 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+G K + S Q D T+G C
Sbjct: 182 AGTKSGVKLSSGQQLDQQTSGGC 204
>gi|295658803|ref|XP_002789961.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226282044|gb|EEH37610.1| GTP-binding protein ypt1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 201
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICIVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++ V +FA G FLE SAK+ NVEQ F + +I
Sbjct: 122 KSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 169
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 123/187 (65%), Gaps = 5/187 (2%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK D ++VV +FA FLE SA + NVEQ F + +I + +
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI--KAQMTNNT 177
Query: 186 SSGVKKN 192
SSG N
Sbjct: 178 SSGNANN 184
>gi|400599215|gb|EJP66919.1| small GTP-binding protein YPTI [Beauveria bassiana ARSEF 2860]
Length = 202
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|11558500|emb|CAC17744.1| small GTP-binding protein YPTI [Trichoderma reesei]
gi|340515573|gb|EGR45826.1| ras GTPase [Trichoderma reesei QM6a]
gi|358389124|gb|EHK26717.1| secretion-related small GTPase YPT1 [Trichoderma virens Gv29-8]
Length = 202
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + + ++
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGTTTANNT 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
++ + N +S++ CC
Sbjct: 182 KPSVHVGQGQGVGN-SSSSSCC 202
>gi|330906915|ref|XP_003295645.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
gi|311332909|gb|EFQ96261.1| hypothetical protein PTT_02052 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 8 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 67
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 68 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 125
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK+ NVEQ F + +I
Sbjct: 126 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 173
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 136/207 (65%), Gaps = 6/207 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +R VSK+ G ARE+G F+E SAK +N+++ F +L ILD +
Sbjct: 120 LGNKCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGREP 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCSS 211
G + + + Q++ S + CC++
Sbjct: 180 GDHVDR--VLVDRKQQSNTSRS-CCNN 203
>gi|154276982|ref|XP_001539336.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
gi|150414409|gb|EDN09774.1| GTP-binding protein ypt1 [Ajellomyces capsulatus NAm1]
Length = 204
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 119/172 (69%), Gaps = 3/172 (1%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
TS+ +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 3 TSETLYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KL
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKL 120
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LVGNK D E ++ V +FA G FLE SAK+ NVEQ F + +I
Sbjct: 121 LVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 172
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 182 bits (462), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 107/203 (52%), Positives = 130/203 (64%), Gaps = 8/203 (3%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGNK
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 142
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D S++VVS + FA E G FLE SAK NVE+ F + I + S+ + G
Sbjct: 143 DLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAGGS 200
Query: 190 KKNIFK-ESPPQNDASTTGCCSS 211
K + P N S GCCSS
Sbjct: 201 KPPTVQIRGQPVNQQS--GCCSS 221
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 134/210 (63%), Gaps = 12/210 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 187 SGVKKNIFKESPPQNDASTT-----GCCSS 211
S + K + P+ DA T CC S
Sbjct: 186 SKTEDRTIKINKPEGDAEATTSQKSACCGS 215
>gi|261190448|ref|XP_002621633.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239591056|gb|EEQ73637.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis SLH14081]
gi|239614972|gb|EEQ91959.1| GTP-binding protein ypt1 [Ajellomyces dermatitidis ER-3]
Length = 221
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 99/169 (58%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IW
Sbjct: 23 QGYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 82
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVG
Sbjct: 83 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVG 140
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D E ++ V +FA G FLE SAK+ NVEQ F + +I
Sbjct: 141 NKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 189
>gi|225719742|gb|ACO15717.1| Ras-related protein ORAB-1 [Caligus clemensi]
Length = 201
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 130/202 (64%), Gaps = 5/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI++VYDVT +D+F NL +EID Y+ ++ K LVG+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIVVVYDVTDQDSFNNLKQ-RLQEIDRYAC-ENVNKPLVGD 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV ++A + FLE SAK NVEQ F + +I + + S
Sbjct: 122 KCDLTTKKVVDYTTAKEYADQLSMPFLEASAKNATNVEQAFMTMAAEIKN--RVGPPAPS 179
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
G + +S P S +GCC
Sbjct: 180 GPSGQVKIDSTPVQSKSGSGCC 201
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 130/205 (63%), Gaps = 12/205 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAG 70
K+LLIGDS VGKS+LLL F+ +F EE S TIGVDFK++ + + G K KL+IWDTAG
Sbjct: 13 LKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGVKYKLSIWDTAG 72
Query: 71 QERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVD 130
QERFRT+TSSYYRGAQG+I+VYDV+ R++F +L W E++ Y K++VGNK+D
Sbjct: 73 QERFRTITSSYYRGAQGVILVYDVSSRESFDDLPR-WFTELETY-CGPSVAKVIVGNKID 130
Query: 131 KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
KE R V EG +A G LFLE SAK ++V++ F+ +V KI+ TP L + G
Sbjct: 131 KEFSRRVPTAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATPELWQKNKPGTA 190
Query: 191 K-------NIFKESPPQNDASTTGC 208
+ E P Q + GC
Sbjct: 191 NVNTMPGAGVRLEQPGQVEHPGCGC 215
>gi|444510207|gb|ELV09542.1| Kinesin light chain 2 [Tupaia chinensis]
Length = 1051
Score = 182 bits (461), Expect = 9e-44, Method: Compositional matrix adjust.
Identities = 96/166 (57%), Positives = 118/166 (71%), Gaps = 3/166 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 684 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 743
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGNK
Sbjct: 744 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 801
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 802 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 847
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 134/210 (63%), Gaps = 12/210 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 187 SGVKKNIFKESPPQNDASTT-----GCCSS 211
S + K + P+ DA T CC S
Sbjct: 186 SKTEDRTIKINKPEGDAEATTLQKSACCGS 215
>gi|388499182|gb|AFK37657.1| unknown [Lotus japonicus]
Length = 203
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 127/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKL LIGDSGVGKS LLL F D++ E TIGVDFKI+ V K +KL IWD
Sbjct: 4 EYDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVG+
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGS 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS +FA + G F+E SAK NVEQ F + I + + ++
Sbjct: 122 KCDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMAMSASIKNRMASQPSANN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
G + P S GCCSS
Sbjct: 182 GRPPTVQIRGQPVGQKS--GCCSS 203
>gi|169605185|ref|XP_001796013.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|189195446|ref|XP_001934061.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|396477831|ref|XP_003840376.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|111065556|gb|EAT86676.1| hypothetical protein SNOG_05612 [Phaeosphaeria nodorum SN15]
gi|187979940|gb|EDU46566.1| GTP-binding protein ypt1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|312216948|emb|CBX96897.1| similar to ras-related protein ypt1 [Leptosphaeria maculans JN3]
gi|451995033|gb|EMD87502.1| hypothetical protein COCHEDRAFT_1023585 [Cochliobolus
heterostrophus C5]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK+ NVEQ F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 169
>gi|46138717|ref|XP_391049.1| YPT1_NEUCR GTP-binding protein ypt1 [Gibberella zeae PH-1]
gi|408390594|gb|EKJ69986.1| hypothetical protein FPSE_09831 [Fusarium pseudograminearum CS3096]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 130/210 (61%), Gaps = 18/210 (8%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V + FA E G F+E SAK NVEQ F + I + + S+ ++
Sbjct: 122 KCDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKE--RMASQPTN 179
Query: 188 GVKKNIFKESPP------QNDASTTGCCSS 211
+ PP Q +GCCSS
Sbjct: 180 NAR-------PPTVQIRGQPVGQKSGCCSS 202
>gi|402076033|gb|EJT71456.1| GTP-binding protein ypt1 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS+LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D ++VV +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|327356550|gb|EGE85407.1| GTPase Rab1/YPT1 [Ajellomyces dermatitidis ATCC 18188]
Length = 232
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/174 (56%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
+ + +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +
Sbjct: 29 TDANHNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTV 88
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T +
Sbjct: 89 KLQIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVN 146
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
KLLVGNK D E ++ V +FA G FLE SAK+ NVEQ F + +I
Sbjct: 147 KLLVGNKSDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 200
>gi|19112997|ref|NP_596205.1| GTPase Ypt1 [Schizosaccharomyces pombe 972h-]
gi|141302|sp|P11620.2|YPT1_SCHPO RecName: Full=GTP-binding protein ypt1
gi|5148|emb|CAA36319.1| ypt1 [Schizosaccharomyces pombe]
gi|6723924|emb|CAB66454.1| GTPase Ypt1 [Schizosaccharomyces pombe]
Length = 203
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA FLE SAK NVEQ F + +I + + SS
Sbjct: 122 KSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K ++ S++ CC
Sbjct: 182 NAKSSVKVGQGTNVSQSSSNCC 203
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 129/208 (62%), Gaps = 7/208 (3%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+D+LFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSL 181
GNK D +++V +FA FLE SA + NVEQ F + +I + S
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNASS 179
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ G++ K N+ + CC
Sbjct: 180 GAGGANASKSNVNLRGQSLTSNQSNSCC 207
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/201 (51%), Positives = 134/201 (66%), Gaps = 6/201 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D LFK+LLIGDSGVGKS LLL F DT+ + TIGVDFKIK + + K +KL IWDT
Sbjct: 5 YDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y++ +D K+L+GNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILIGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+D +++R VS +EG + A FLE SAK NVEQ F+ + +I + E +
Sbjct: 123 IDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKSQ--HETINK 180
Query: 189 VKKNIFKESPPQNDASTTGCC 209
K NI + P D + CC
Sbjct: 181 GKTNINLNARPIKD-TKKKCC 200
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 137/207 (66%), Gaps = 7/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+D+L KLLLIGDSGVGKS LLL F D + TIG+DFKI+ + L GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENV-RTWHANIEQHAS-EGVSKILIGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D E +R V+ ++G + A+E G ++E SAK+ NVE+ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ N+ S P++ A+ GCCS
Sbjct: 183 ASPAAAAGNVNVNSAPKSGAAGGGCCS 209
>gi|310794670|gb|EFQ30131.1| Ras family protein [Glomerella graminicola M1.001]
gi|380490830|emb|CCF35739.1| GTP-binding protein ypt1 [Colletotrichum higginsianum]
Length = 202
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 132/204 (64%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + + S ++
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE--RMGSTTAN 179
Query: 188 GVKKNIFKESPPQNDASTT--GCC 209
K ++ + P +S + GCC
Sbjct: 180 NTKPSV-QVGPGHGVSSNSGGGCC 202
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 103/217 (47%), Positives = 146/217 (67%), Gaps = 12/217 (5%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTI-GVDFKIKHVALGGKK 60
A S S+ +FD+L KLLLIGDSGVGKS LLL F+ DTF T G+DFK++ V L GK+
Sbjct: 4 APSRSRGDFDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKR 63
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 64 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKIL 176
K+LVGNKVD +++RVVS +G A EYG F E SAKT NVEQ F ++ ++
Sbjct: 122 NKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRLT 181
Query: 177 DTPSLLSEGSSGVKKNIFKESPPQNDAST--TGCCSS 211
+T + +E + I ++ P Q AS+ + CC++
Sbjct: 182 ETVAAAAEPPT---IQISRQEPDQAAASSRWSACCNT 215
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 131/202 (64%), Gaps = 9/202 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LL+ F ++F E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VY VT + +F N+ W +EI+ Y+ N +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V + ++FA+E+ FLE SAK +NVE F E+ +I + + + SS
Sbjct: 121 KCDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSS 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V N Q + GCC
Sbjct: 181 NVTVN-----STQPVTKSGGCC 197
>gi|383852551|ref|XP_003701790.1| PREDICTED: ras-related protein Rab-18-like [Megachile rotundata]
Length = 219
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
F ++ KLL+IG+S VGKS+++L FT D F E + T+G+D+K K + + G +KLAIWDT
Sbjct: 3 FYFVLKLLMIGESNVGKSSIILRFTEDEFYENMQSTVGMDYKTKQITIDGNMVKLAIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D +K++VGNK
Sbjct: 63 AGQERFRTLTPSYYRDGQGAILVYDVTDRVTFVKL-ETWLNELNTYCNKTDIVKMVVGNK 121
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+D + R VS +EG+ FAR + L++E SAKT ++ CFEELV KI+ TP L
Sbjct: 122 IDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 173
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
Q+ + KLL+IG+S VGKS++LL FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 63 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVG 121
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
NK+D + R VS +EG+ FAR + L++E SAKT ++ CFEELV KI+ TP L
Sbjct: 122 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 175
>gi|389624109|ref|XP_003709708.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
gi|351649237|gb|EHA57096.1| GTP-binding protein ypt1 [Magnaporthe oryzae 70-15]
Length = 202
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMADKKVVDYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQI 169
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
Q+ + KLL+IG+S VGKS++LL FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 3 QDVLTVLKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 63 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVG 121
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
NK+D + R VS +EG+ FAR + L++E SAKT ++ CFEELV KI+ TP L
Sbjct: 122 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 175
>gi|302899086|ref|XP_003047976.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256728908|gb|EEU42263.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 202
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVEYSVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|443896742|dbj|GAC74085.1| GTP-binding protein SEC4 [Pseudozyma antarctica T-34]
Length = 208
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 137/207 (66%), Gaps = 8/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+D+L KLLLIGDSGVGKS LLL F D + TIG+DFKI+ + L GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENV-RTWHANIEQHAS-EGVSKILIGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D E +R VS ++G + ARE G ++E SAK+ NVE+ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVSTEQGEELARELGIPYIETSAKSNANVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ N+ S P++ A T GCC+
Sbjct: 183 ASPAAAAGNVNVNSAPKSGA-TGGCCN 208
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/159 (59%), Positives = 114/159 (71%), Gaps = 3/159 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIG+SGVGKS LLL + ++F E TIGVDFKIK + L + +KL IWDTA
Sbjct: 30 DYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTA 89
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGA GII+VYDVT RD+F N+ W EI+ ++ C K+LVGNK
Sbjct: 90 GQERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQ-WMHEIERFANAGVC-KILVGNKC 147
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
D E R VS +EG++ A+ Y FLE SAK +NVE F
Sbjct: 148 DMEESRKVSHEEGMELAKHYEIPFLETSAKNSINVETSF 186
>gi|406867933|gb|EKD20970.1| putative GTP-binding protein ypt1 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 321
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 125 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 184
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 185 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 242
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 243 SDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 289
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|119182590|ref|XP_001242423.1| GTP-binding protein ypt1 [Coccidioides immitis RS]
gi|303319289|ref|XP_003069644.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109330|gb|EER27499.1| secretion related GTPase, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040923|gb|EFW22856.1| GTP-binding protein ypt1 [Coccidioides posadasii str. Silveira]
gi|392865315|gb|EAS31095.2| GTP-binding protein ypt1 [Coccidioides immitis RS]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++ V +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|356520774|ref|XP_003529035.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABD2a-like
[Glycine max]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 KYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEKDGKTIKLXIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYR A GII+VYDV D F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYREAHGIIIVYDVIDEDRFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + RVVS +FA + G F+E SAK NVE F + I + + S+ S+
Sbjct: 122 KSDMTTNRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSTAIKN--RMASQPSA 179
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
K Q +GCCSS
Sbjct: 180 NNAKPPIVHIKGQPVGPKSGCCSS 203
>gi|440802525|gb|ELR23454.1| Rasrelated protein ORAB-1, putative [Acanthamoeba castellanii str.
Neff]
Length = 210
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 124/170 (72%), Gaps = 3/170 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++D+LFK+L++GDSGVGKS+LLL FT DTF + TIGVDFKI+ V L GK +K+ IWD
Sbjct: 3 DYDHLFKILMVGDSGVGKSSLLLRFTDDTFTDNFISTIGVDFKIRTVNLDGKVIKMQIWD 62
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA G+I+VYDVT + +F N A W EI+ Y+ + +KLLVGN
Sbjct: 63 TAGQERFRTITSSYYRGAHGVILVYDVTDQVSFNN-ARQWLTEIERYACG-NVVKLLVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
K D S+RVVS G +FA ++ F+E SAK NV+Q F LV ++ +
Sbjct: 121 KSDLVSKRVVSTATGKEFADQFHLPFIEASAKDGSNVKQAFMTLVKEVYE 170
>gi|358058494|dbj|GAA95457.1| hypothetical protein E5Q_02111 [Mixia osmundae IAM 14324]
Length = 384
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 116/161 (72%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D LFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + LGGK +KL IWD
Sbjct: 137 EYDLLFKLLLIGDSGVGKSCLLLRFADDSYSDSYISTIGVDFKIRTIELGGKTVKLQIWD 196
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +DTF+N+ W +EID Y+ + KLLVGN
Sbjct: 197 TAGQERFRTITSSYYRGAHGIIVVYDVTDQDTFSNVKQ-WLQEIDRYAC-EGVDKLLVGN 254
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D + ++VV +FA + FLE SAK NVEQ F
Sbjct: 255 KSDLQQKKVVDYTVAKEFADQLAIPFLETSAKNATNVEQAF 295
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 181 bits (459), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQI 169
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 115/169 (68%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D +VV + FA E G FLE SAK NVEQ F + +I
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 169
>gi|451846002|gb|EMD59313.1| hypothetical protein COCSADRAFT_347867 [Cochliobolus sativus
ND90Pr]
Length = 224
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+ +DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL
Sbjct: 23 SPHNRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKL 82
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KL
Sbjct: 83 QIWDTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKL 140
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
LVGNK D ++VV +FA G FLE SAK+ NVEQ F + +I
Sbjct: 141 LVGNKSDMADKKVVEYTVAKEFADSLGIPFLETSAKSATNVEQAFLTMARQI 192
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 133/205 (64%), Gaps = 9/205 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + R VS + FA E G F+E SAK NVEQ F + I + + S+ ++
Sbjct: 122 KCDLPN-RAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKN--RMASQPAN 178
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
+ + + P N GCCSS
Sbjct: 179 NARPPTVQLQGQPVNQKG--GCCSS 201
>gi|449300739|gb|EMC96751.1| hypothetical protein BAUCODRAFT_34142 [Baudoinia compniacensis UAMH
10762]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMADKKVVEYTVAKEFADSLGIQFLETSAKNASNVEQAFLTMARQI 169
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +R++S++ G A ++ F+E SAKT VN+E+ F EL IL+ ++
Sbjct: 120 LGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ--MAG 177
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
++ K PP+ CC
Sbjct: 178 KDQAENQDRLKVLPPEK--KVMNCC 200
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 134/202 (66%), Gaps = 15/202 (7%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQ++DYLFKLLLIG+S VGKS+LLL F+ + F + PTIGVDFKI+ + GK +KL I
Sbjct: 4 QQDYDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+TSSYY+GA GII+VYD+T + TF ++ D W E D + N++ IKLLV
Sbjct: 64 WDTAGQERFKTITSSYYKGAHGIILVYDITDKQTFKDI-DNWLAEAD-KNANENVIKLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK D ES+R V+ +EG + A G F+E SA NVE F +L +E
Sbjct: 122 GNKADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAF----------ITLATEI 171
Query: 186 SSGVKKNIFKESPPQNDASTTG 207
S V+KN E+ P+ + TG
Sbjct: 172 KSRVQKNT--ETAPRGANAQTG 191
>gi|156063734|ref|XP_001597789.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980]
gi|154697319|gb|EDN97057.1| GTP-binding protein ypt1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/162 (59%), Positives = 113/162 (69%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N+ KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLSEIDRYA-NESVCKLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D +VV + G A E G FLE SAK +NVEQ F
Sbjct: 121 NKCDLVENKVVDTQTGKALADELGIPFLETSAKDSINVEQAF 162
>gi|258571511|ref|XP_002544559.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
gi|237904829|gb|EEP79230.1| GTP-binding protein ypt1 [Uncinocarpus reesii 1704]
Length = 1102
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 906 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 965
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 966 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 1023
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E ++ V +FA G FLE SAK NVEQ F + +I
Sbjct: 1024 SDMEDKKAVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 1070
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVSK G A+++G F E SAK V+V+ F +L IL + + +
Sbjct: 120 LGNKCDMSDRRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 176
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ PQ + GCC
Sbjct: 177 STDEQSRDTINPVQPQRPGGSGGCC 201
>gi|154318598|ref|XP_001558617.1| GTP-binding protein ypt1 [Botryotinia fuckeliana B05.10]
Length = 201
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 169
>gi|67528150|ref|XP_661885.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
gi|40739629|gb|EAA58819.1| YPT1_NEUCR GTP-binding protein ypt1 [Aspergillus nidulans FGSC A4]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 63
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 64 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 121
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 SDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 168
>gi|403072064|pdb|4FMB|B Chain B, Vira-Rab1 Complex Structure
gi|403072066|pdb|4FMB|D Chain D, Vira-Rab1 Complex Structure
gi|403072068|pdb|4FMB|F Chain F, Vira-Rab1 Complex Structure
Length = 171
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D LFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 2 EYDALFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 61
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 119
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV ++A FLE SAK NVEQ F + +I
Sbjct: 122 KCDMTTKKVVDYTTAKEYADSLNIPFLETSAKNNTNVEQAFLTMASEI 169
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 135/209 (64%), Gaps = 12/209 (5%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + I+ +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISK-WLRNIEEHAS-EDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TP-SLL 182
+GNK D E +R++SK+ G A+E+G F E SAK +N+E F L IL TP
Sbjct: 120 LGNKCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKET 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCSS 211
GS+GV Q S+ CCS+
Sbjct: 180 GAGSAGV-------DVTQQRQSSRSCCSN 201
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 137/208 (65%), Gaps = 7/208 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
S++ +D LFK+LLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 SKKTYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T+R +F N+ + W + ID +++ +D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENI-NKWIRNIDEHAS-KDVEKII 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLS 183
+GNKVD+ +R V K E + AR + F+E SAKT +N++ F L IL+ P S
Sbjct: 120 LGNKVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRS 179
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ S + +I S P N GCC S
Sbjct: 180 QASETI--SIQNHSRP-NSNQKRGCCGS 204
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 126/176 (71%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FK+L+IG+SGVGKS+L+L FT D F+ + + TIGVDFK K V + K+KLAIWDTAGQE
Sbjct: 10 FKILIIGESGVGKSSLMLRFTEDDFDKDQALTIGVDFKTKIVEIDNVKVKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYR AQG I+VYDVT++DTF L + W E+++Y T + K++VGNK+D
Sbjct: 70 RFRTLTPSYYRDAQGAILVYDVTKKDTFQKL-ESWLNELEIYGTRNNMAKMIVGNKID-S 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
++R +++ +G FA+++ +F+E SA+T V FEE+V KI++T L G
Sbjct: 128 TDRTITRDDGFRFAKKHRTMFIETSARTNEGVRDAFEEVVRKIMETDGLWERNDYG 183
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 115/169 (68%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDTVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D +VV FA E G FLE SAK +NVEQ F + +I
Sbjct: 121 NKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEI 169
>gi|358371548|dbj|GAA88155.1| GTP-binding protein ypt1, partial [Aspergillus kawachii IFO 4308]
Length = 197
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/167 (59%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 1 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 60
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 61 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 118
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 119 SDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 165
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+E DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D E ER V+ ++G + A F+E SAK +NV++ F ++ I+
Sbjct: 121 NKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIM 170
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 8/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFK+LLIG+SGVGKS+LLL F D F + PTIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EYDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERF+T+TSSYY+GA GII+ YD+T R++F+ + + W E++ ++++ + ++LVGN
Sbjct: 64 TAGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIEN-WMNEVEKHASD-NISRILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-----LDTPSLL 182
K D E R VS EG + A Y FLE SAK NVE+ F + +I + P
Sbjct: 122 KSDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREIKSRVAITQPKKA 181
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+E + + N + + GCC
Sbjct: 182 TEQTQAQRINKNQHQTKKIQEKKGGCC 208
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 121/181 (66%), Gaps = 3/181 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D+ FK+LLIGDSGVGKS LLL F D++ + TIGVDFKIK + L GK +KL IWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +E+VV + FA G F+E SAK NVE+CF + I + + + E
Sbjct: 122 KTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEAPK 181
Query: 188 G 188
G
Sbjct: 182 G 182
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 134/204 (65%), Gaps = 6/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F ++ +W +EID Y+T +KL+VGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVK-MWLQEIDRYAT-AGVLKLMVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE--G 185
K D + +R+V +FA FLE SA NVE+ F + +I ++ + + G
Sbjct: 122 KSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQIKESMAQQHKDTG 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
K N+ + ++AS GCC
Sbjct: 182 KKDDKANVNLKGQSLSNAS-GGCC 204
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 130/199 (65%), Gaps = 3/199 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ QD K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRN-WIRNIEEHAS-QDVDKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D +RVVSK++G A E+G F+E SAK +NVE F L I E S+
Sbjct: 123 CDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKMDRKLESSNA 182
Query: 189 VKKNIFKESPPQNDASTTG 207
KN +P + A +G
Sbjct: 183 QAKNAGGITPGKTQAKKSG 201
>gi|336381842|gb|EGO22993.1| hypothetical protein SERLADRAFT_471590 [Serpula lacrymans var.
lacrymans S7.9]
Length = 241
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 16/198 (8%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG++ VGKS+LLL F+ + + +E S TIGVDF++ + + G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFR +TSSYYRGAQGII+VYDV R++F L W E++ Y + ++++VGNKVDK
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPD-TVVRIIVGNKVDK 137
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS--EGSSGV 189
E R V EG +A G LF+E SAKT V V F+++V +IL+TP L + EG G
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPELWAPVEGGRG- 196
Query: 190 KKNIFKESPPQNDASTTG 207
PP A T+G
Sbjct: 197 --------PPIASARTSG 206
>gi|336369061|gb|EGN97403.1| hypothetical protein SERLA73DRAFT_184094 [Serpula lacrymans var.
lacrymans S7.3]
Length = 235
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 131/198 (66%), Gaps = 16/198 (8%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG++ VGKS+LLL F+ + + +E S TIGVDF++ + + G+K+KL+IWDTAGQ
Sbjct: 20 KLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDTAGQ 79
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFR +TSSYYRGAQGII+VYDV R++F L W E++ Y + ++++VGNKVDK
Sbjct: 80 ERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNKVDK 137
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS--EGSSGV 189
E R V EG +A G LF+E SAKT V V F+++V +IL+TP L + EG G
Sbjct: 138 EQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPELWAPVEGGRG- 196
Query: 190 KKNIFKESPPQNDASTTG 207
PP A T+G
Sbjct: 197 --------PPIASARTSG 206
>gi|299738319|ref|XP_001838277.2| Rab18 [Coprinopsis cinerea okayama7#130]
gi|298403253|gb|EAU83465.2| Rab18 [Coprinopsis cinerea okayama7#130]
Length = 223
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/177 (54%), Positives = 125/177 (70%), Gaps = 8/177 (4%)
Query: 15 KLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG+S VGKS+LLL F+ + + +E S TIGVDF++ + + GKK+KL+IWDTAGQ
Sbjct: 18 KLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKVKLSIWDTAGQ 77
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRT+TSSYYRGAQGII+VYDV R+TF L W E++ Y ++ +K+LVGN K
Sbjct: 78 ERFRTITSSYYRGAQGIILVYDVANRETFEALPR-WYSELETY-VSESVVKILVGN---K 132
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
E R V EG FA++ LF+E SAKT V V++ F+ELV +ILDTP L S G
Sbjct: 133 EYSRQVPTAEGEKFAQKMNSLFVEASAKTAVGVKEVFQELVERILDTPELWDPKSKG 189
>gi|254583504|ref|XP_002497320.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
gi|238940213|emb|CAR28387.1| ZYRO0F02816p [Zygosaccharomyces rouxii]
Length = 209
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 132/208 (63%), Gaps = 9/208 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVDLDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +RVV +FA F+E SA NVE+ F + +I D+ +
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFIETSALDSTNVEEAFLTMARQIKDSMAQQQRHDG 181
Query: 188 GVKK------NIFKESPPQNDASTTGCC 209
G N+ + ++S GCC
Sbjct: 182 GAANGQNENGNVNLKGQSLTNSSANGCC 209
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 123/173 (71%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D +RVV+K+ G ARE+ F+E SAK+ +N+E+ F EL ILD
Sbjct: 120 LGNKCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILD 172
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 122/176 (69%), Gaps = 3/176 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+GNK D +RVVS + G ARE+ F+E SAK +N+E+ F EL ILD S
Sbjct: 120 LGNKCDMTDKRVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTS 175
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EI+ Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQ-WLTEIERYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +S++ V FA E G FLE SAK+ NVEQ F + +I
Sbjct: 122 KSDLQSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEI 169
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D +++V +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMARQI 169
>gi|158287951|ref|XP_309827.4| AGAP010875-PA [Anopheles gambiae str. PEST]
gi|157019435|gb|EAA05523.4| AGAP010875-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 125/176 (71%), Gaps = 3/176 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FK+L+IG+SGVGKS+L+L FT + F+ + + TIGVDFK K + L G K+KLAIWDTAGQE
Sbjct: 10 FKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDGVKVKLAIWDTAGQE 69
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYR AQG I+VYDVT+ DTF L + W E+++Y T + K++VGNK+D
Sbjct: 70 RFRTLTPSYYRDAQGAILVYDVTKPDTFQKL-ESWLNELEIYGTRNNMAKMVVGNKID-H 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
R + ++EG FA+++ +F+E SAKT V+ FEE+V KI++T L G
Sbjct: 128 PNRAIGREEGFRFAKKHRMMFIETSAKTSEGVKDAFEEVVRKIMETDGLWERNDYG 183
>gi|387017930|gb|AFJ51083.1| ras-related protein Rab-1A-like [Crotalus adamanteus]
Length = 201
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 133/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EI+ Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIERYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV +FA FLE SAK NVEQ F + +I + G++
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLSIPFLETSAKNATNVEQSFMTMAAEI---KKRMGPGAT 178
Query: 188 --GVKKNIFKESPPQNDASTTGCC 209
G + N+ +S P GCC
Sbjct: 179 AGGDRPNLKIDSTPVKQGG-GGCC 201
>gi|270346387|pdb|2WWX|A Chain A, Crystal Structure Of The SidmDRRA(GEFGDF DOMAIN)-Rab1
(Gtpase Domain) Complex
Length = 175
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVG
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGI 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 169
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +VV +E FA G FLE SAK +NVE+ F
Sbjct: 122 KCDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 162
>gi|317031687|ref|XP_003188788.1| GTP-binding protein ypt1 [Aspergillus niger CBS 513.88]
gi|350640266|gb|EHA28619.1| hypothetical protein ASPNIDRAFT_202783 [Aspergillus niger ATCC
1015]
Length = 219
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 22 RYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 81
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 82 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 139
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 140 KSDMEDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 187
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 124/176 (70%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + I+ ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNINEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TP 179
+GNK D + +RVV K G ARE+ FLE SAK +N+E+ F +L L IL+ TP
Sbjct: 120 LGNKCDMDDKRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSILNKTP 175
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D +++V +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|440911147|gb|ELR60860.1| Ras-related protein Rab-18, partial [Bos grunniens mutus]
Length = 174
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/150 (61%), Positives = 113/150 (75%), Gaps = 3/150 (2%)
Query: 33 FTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMV 91
FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQERFRTLT SYYRGAQG+I+V
Sbjct: 2 FTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILV 61
Query: 92 YDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGC 151
YDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+ V + EG+ FAR++
Sbjct: 62 YDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKENHE-VDRNEGLKFARKHSM 119
Query: 152 LFLECSAKTRVNVEQCFEELVLKILDTPSL 181
LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 120 LFIEESAKTCDGVQCAFEELVEKIIQTPGL 149
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N A W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNN-AKQWLSEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V +A E G FLE SAK +NVE+ F + I + +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 188 GVKKNI--FKESPPQNDASTTGCC 209
NI K P Q + + CC
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCC 205
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 128/204 (62%), Gaps = 12/204 (5%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 68
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 126
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSEGS 186
D +VV + FA E G FLE SAK NVEQ F + +I + + S+ S
Sbjct: 127 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSS 186
Query: 187 SGVKKNIFKESPPQNDASTTGCCS 210
V+ K P Q +S CCS
Sbjct: 187 GNVQ---MKGQPIQQKSS---CCS 204
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D + + TIGVDFKI+ V L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGN
Sbjct: 65 TAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +VV +E A G FLE SAK +NVE+ F + +I + ++ ++
Sbjct: 123 KCDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSSEI--KKRMATQPAA 180
Query: 188 GVKKNIF---KESPPQNDASTTGCCSS 211
K + K P Q + S+ CCSS
Sbjct: 181 ERKPTVHLHGKGQPIQQEKSS--CCSS 205
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 131/203 (64%), Gaps = 9/203 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFT---SDTFEELSPTIGVDFKIKHVALGGKKMKLAIW 66
+DY+FK+L+IGDS VGK+ L+ F+ + + + TIG+DFKIK V L GKK+KL IW
Sbjct: 27 YDYIFKVLVIGDSYVGKTALITIFSTGRASPYRDYQTTIGIDFKIKTVELNGKKIKLQIW 86
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERF T+T+SYYRGA GI++VYD+T+ TF N+A W + I ++ N+D K+L+G
Sbjct: 87 DTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKMLLG 144
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D + +R+++K G A+E G F+E SAK +NVEQ F L IL GS
Sbjct: 145 NKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTGS 204
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
GV K KE +S + CC
Sbjct: 205 PGVVKPDMKEG----SSSGSKCC 223
>gi|156555777|ref|XP_001602999.1| PREDICTED: ras-related protein Rab-18-B-like [Nasonia vitripennis]
Length = 223
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 13 LFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
+ K+L+IG++ VGKS++LL FT D F + + T+G+D+K K V + G +KLAIWDTAGQ
Sbjct: 9 ILKILMIGETNVGKSSILLRFTEDEFHDNIQNTVGMDYKSKKVTIDGNTVKLAIWDTAGQ 68
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT +YYR QG I+VYDVT R TFT L D+W E+ Y D +K++VGNK+D
Sbjct: 69 ERFRTLTPNYYRDGQGAILVYDVTDRSTFTKL-DMWLNELHTYCNKTDIVKMVVGNKIDL 127
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+R V+ +EG+ FAR + L++E SAKT V+ CFEELV KI+ TP L
Sbjct: 128 -PDRQVTTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGL 176
>gi|5146|emb|CAA33192.1| YPT1-related protein [Schizosaccharomyces pombe]
Length = 206
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 126/203 (62%), Gaps = 3/203 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ L GK +KL IW
Sbjct: 6 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIW 65
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +LLVG
Sbjct: 66 DTAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVG 123
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D ++VV +FA FLE SAK NVEQ F + +I + + S
Sbjct: 124 NKSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFAS 183
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
S K ++ S++ CC
Sbjct: 184 SNAKSSVKVGQGTNVSQSSSNCC 206
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/185 (50%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK VN+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 104/202 (51%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+V+DVT ++F N+ W EID ++T+ + KLLVGNK
Sbjct: 82 GQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKG-WLTEIDKFATD-NINKLLVGNKC 139
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D ++RVVS + FA E G FLE SAK NVE F + +I + ++
Sbjct: 140 DVTNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMASQPAANAVR 199
Query: 190 KKNIFKESPPQNDASTTGCCSS 211
+ P N ++T CCSS
Sbjct: 200 PTTVPIRGKPVNQSTT--CCSS 219
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 133/205 (64%), Gaps = 6/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 ARRPYDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D +K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A+++G F E SAK V+V+ F +L IL + + +
Sbjct: 120 LGNKCDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAIL---AKMPD 176
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
+ ++ PQ + GCC
Sbjct: 177 STEEQSRDTVNPVQPQRTGGSGGCC 201
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D ++VV +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|213406139|ref|XP_002173841.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
gi|212001888|gb|EEB07548.1| GTP-binding protein ypt1 [Schizosaccharomyces japonicus yFS275]
Length = 204
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 129/202 (63%), Gaps = 5/202 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ-DCIKLLVGN 127
AGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID ++ +C LLVGN
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRFAVEGVNC--LLVGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA G FLE SAK NVEQ F + +I + S + ++
Sbjct: 123 KCDITDKKVVEYTVAKEFADGLGIPFLETSAKDSTNVEQAFLTMARQIKERMSNSTLNTA 182
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K + S++GCC
Sbjct: 183 SSKTTVKVGQGTNVSQSSSGCC 204
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 133/209 (63%), Gaps = 10/209 (4%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSL 181
GNK D +++V +FA FLE SA + NVEQ F + +I ++
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAHMVNNNVG 179
Query: 182 LSEGSSG-VKKNIFKESPPQNDASTTGCC 209
+ G+ G N+ ES N +++ CC
Sbjct: 180 TAAGNKGKTNVNLRGESLTSNQSNS--CC 206
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 134/214 (62%), Gaps = 24/214 (11%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+ F E SAK +N+E+ F L IL
Sbjct: 120 LGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDIL-------- 171
Query: 185 GSSGVKKNIFKESPPQN-DASTTG-------CCS 210
+K KE +N D STTG CCS
Sbjct: 172 -----QKTPVKEPDRENVDISTTGGGTGLKKCCS 200
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 13 LFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
+ KLL+IG+S VGKS+++L FT D F E + T+G+D++ K V + G +KLAIWDTAGQ
Sbjct: 10 VLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQ 69
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VGNK+D
Sbjct: 70 ERFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVGNKIDL 128
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R VS +EG+ FAR + L++E SAKT ++ CFEELV KI+ TP L
Sbjct: 129 PN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 177
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 137/211 (64%), Gaps = 16/211 (7%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQ++DYLFK+LLIG+S VGKS+LLL F+ F E PTIGVDFKI+ + GK +K+ I
Sbjct: 4 QQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+T+SYY+GA GII+ YD+T + +F ++ + W E++ +++ ++ ++LLV
Sbjct: 64 WDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-------DT 178
GNK D ES+R V+ +EG + A G F+E SAK NV+Q F L I D
Sbjct: 122 GNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDK 181
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P+ + +G KN SP + + GCC
Sbjct: 182 PTPGGKTPAGNLKNT---SPAKKEG---GCC 206
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D KLLLIG+SGVGKS+LLL F+ D F + T+G+DF++K++ L KK+KL IWD
Sbjct: 3 EKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWD 62
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGN
Sbjct: 63 TAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E +RVV+ +EG A + G FLE SAK + V+ CF L ++ + E S
Sbjct: 121 KCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQ 177
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ I + +TGCC
Sbjct: 178 SAQPGIVDPTQQTQPTESTGCC 199
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +R+VS++ G A ++G F+E SAKT VN+E F EL IL+ ++
Sbjct: 120 LGNKCDMEDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAILNKQ--MAG 177
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
++ + PP+ CC
Sbjct: 178 KDLAENQDRLRVLPPEK--RVMNCC 200
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/205 (45%), Positives = 134/205 (65%), Gaps = 7/205 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +R++S++ G A ++ F+E SAKT VN+E+ F EL IL+ ++
Sbjct: 120 LGNKCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILNKQ--MAG 177
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
++ + PP+ CC
Sbjct: 178 KDQAENQDRLRVLPPEK--KVMNCC 200
>gi|322803217|gb|EFZ23238.1| hypothetical protein SINV_08216 [Solenopsis invicta]
Length = 224
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 126/187 (67%), Gaps = 3/187 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
Q++ + K+L+IG+S VGKS++LL FT D F E + T+G+D+K K V + G +KLAI
Sbjct: 5 QEDILTILKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQVNIDGNVVKLAI 64
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRTLT SYYR QG I++YDVT R+TF L + W E++ Y D +K++V
Sbjct: 65 WDTAGQERFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVV 123
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
GNK+D + R VS ++G+ FAR + L++E SAKT V CFEELV KI+ TP L
Sbjct: 124 GNKIDLPN-REVSTEDGLQFARRHQTLYIESSAKTADGVRCCFEELVQKIIQTPGLWDTH 182
Query: 186 SSGVKKN 192
S + N
Sbjct: 183 SMRLYDN 189
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D ++VV +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|442755753|gb|JAA70036.1| Putative gtpase rab1/ypt1 small g protein superfamily [Ixodes
ricinus]
Length = 222
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 119/171 (69%), Gaps = 2/171 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+E+D+LFK+++IGDSG GKS+LLL F DT+ E + TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDHLFKIIIIGDSGAGKSSLLLRFADDTYSESNMSTIGVDFKIKTVKIDNVTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT R +F ++ W +I+ YS+ + KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIITVYDVTNRVSFESVKKTWLTDIEKYSS-ANISKLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
NKVD E R V+ E +FA + ++E SAKT NVE+ FE + + D
Sbjct: 121 NKVDLEENRAVTSVEAREFAMQNNMDYIEASAKTAQNVEKAFESIAKTLKD 171
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D +++V +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 100/204 (49%), Positives = 123/204 (60%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R V +A E G FLE SAK +NVE+ F + I + +
Sbjct: 122 KCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 188 GVKKNI--FKESPPQNDASTTGCC 209
NI K P Q + + CC
Sbjct: 182 RKPSNIVQMKGQPIQQEQQKSRCC 205
>gi|322709841|gb|EFZ01416.1| small GTP-binding protein YPTI [Metarhizium anisopliae ARSEF 23]
Length = 248
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 98/168 (58%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 50 RYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 109
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 110 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 167
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 168 KSDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 215
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 134/215 (62%), Gaps = 25/215 (11%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD++ +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL-------- 171
Query: 185 GSSGVKKNIFKESPPQN-DASTTG--------CCS 210
KK KE +N D ST G CCS
Sbjct: 172 -----KKTPVKEPNSENVDISTGGGVTGWKSKCCS 201
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 133/209 (63%), Gaps = 10/209 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + G+ +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL----LSE 184
D R VSK+EG FA+E G LFLE SA+T NVE+ F + +IL LS
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSN 180
Query: 185 GSSGVKKNIFKESPPQNDASTT---GCCS 210
SSG+K + P D + + GCC+
Sbjct: 181 ESSGIKVGYGRPQGPSGDGTVSQRGGCCN 209
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV +FA FLE SA + NVEQ F + +I
Sbjct: 122 KADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|343424940|emb|CBQ68478.1| probable SEC4-like Rab/GTPase [Sporisorium reilianum SRZ2]
Length = 208
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 136/207 (65%), Gaps = 8/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+D+L KLLLIGDSGVGKS LLL F D + TIG+DFKI+ + L GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENV-RTWHANIEQHAS-EGVSKILIGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D E +R V+ ++G + ARE G ++E SAK+ NVE+ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELARELGIPYIETSAKSNANVEEAFFHLAREVKTRLIDTAAVTQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ N+ S P+ A+ GCCS
Sbjct: 183 ASPAAATGNVNVNSAPKTGAA-GGCCS 208
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 122/175 (69%), Gaps = 3/175 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
Q+ + KLL+IG+S VGKS+++L FT D F E + T+G+D++ K V + G +KLAIW
Sbjct: 5 QDVLTVLKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRTLT SYYR QG I+VYDVT R TF L + W E++ Y D IK++VG
Sbjct: 65 DTAGQERFRTLTPSYYRDGQGAILVYDVTDRITFMKL-ETWLNELNTYCNKTDIIKMVVG 123
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
NK+D + R VS +EG+ FAR + L++E SAKT ++ CFEELV KI+ TP L
Sbjct: 124 NKIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGL 177
>gi|449267460|gb|EMC78403.1| Ras-related protein Rab-18-B, partial [Columba livia]
Length = 187
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/159 (55%), Positives = 117/159 (73%), Gaps = 3/159 (1%)
Query: 24 VGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYY 82
V +LLL FT FE +L PTIG+DFK+K + + G ++LAIWDTAGQERFRTLT SYY
Sbjct: 1 VSSRSLLLRFTGGGFEPKLKPTIGIDFKVKKMVVDGHAVQLAIWDTAGQERFRTLTPSYY 60
Query: 83 RGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEG 142
RGAQG+++VYDVTR++TFT L + W E+D Y + +K+LVGNK DK +R V +KEG
Sbjct: 61 RGAQGVVLVYDVTRKETFTGL-EGWLNELDTYIAKNNTVKMLVGNKTDK-PDREVERKEG 118
Query: 143 IDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ FAR++ LF+E SAKT+ V+ FEEL KIL+TP +
Sbjct: 119 LQFARKHSLLFIETSAKTQDGVQCAFEELAAKILETPGV 157
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/215 (47%), Positives = 134/215 (62%), Gaps = 25/215 (11%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G A+E+G F E SAK +N+E+ F L IL
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDIL-------- 171
Query: 185 GSSGVKKNIFKESPPQN-DASTTG--------CCS 210
KK KE +N D ST G CCS
Sbjct: 172 -----KKTPVKEPNSENVDISTGGGVTGWKTKCCS 201
>gi|403419531|emb|CCM06231.1| predicted protein [Fibroporia radiculosa]
Length = 202
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 130/206 (63%), Gaps = 13/206 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSG S LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 5 EYDYLFKLLLIGDSG---SCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 61
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT DTFTN+ W +EID Y++ + KLLVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGN 119
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D S++VV +FA + FLE SAK NVEQ F + +I D S + G
Sbjct: 120 KSDLTSKKVVEYSAAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSSTVG 179
Query: 186 SSGVKKNIFKESPPQNDASTT--GCC 209
+G I +P Q T GCC
Sbjct: 180 GTGKSSTI---TPGQTVTQQTSGGCC 202
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 112/162 (69%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D +VV + FA E G FLE SAK +NVEQ F
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+E DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D E ER V+ ++G + A F+E SAK +NV++ F ++ I+
Sbjct: 121 NKCDLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIKIATDIM 170
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 94/161 (58%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D+ FK+LLIGDSGVGKS LLL F D++ + TIGVDFKIK + L GK +KL IWD
Sbjct: 4 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +E+VV + FA G F+E SAK NVE+CF
Sbjct: 122 KTDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECF 162
>gi|403216071|emb|CCK70569.1| hypothetical protein KNAG_0E03100 [Kazachstania naganishii CBS
8797]
Length = 212
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 135/212 (63%), Gaps = 14/212 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL--LSEG 185
K D +RVV +FA FLE SA NVE+ F + +I ++ + L G
Sbjct: 122 KCDLNDKRVVEYDVAKEFADANNMPFLETSALDSTNVEEAFLTMARQIKESMAQQKLQNG 181
Query: 186 SSG--------VKKNIFKESPPQNDASTTGCC 209
++G KN+ + S +GCC
Sbjct: 182 ANGQAGNNQQNANKNVNLNGQSLTNQS-SGCC 212
>gi|347830671|emb|CCD46368.1| similar to ras-related protein ypt1 [Botryotinia fuckeliana]
Length = 226
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/169 (57%), Positives = 115/169 (68%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IW
Sbjct: 28 NRYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIW 87
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVG
Sbjct: 88 DTAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVG 145
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 146 NKSDMSDKKVVDYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 194
>gi|225554649|gb|EEH02945.1| GTP-binding protein ypt1 [Ajellomyces capsulatus G186AR]
gi|325094932|gb|EGC48242.1| GTP-binding protein ypt1 [Ajellomyces capsulatus H88]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 9 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 68
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 69 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 126
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E ++ V +FA G FLE SAK+ NVEQ F + +I
Sbjct: 127 SDMEDKKAVEYTVAKEFADSLGIPFLETSAKSASNVEQAFLTMARQI 173
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D +++V +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 117/170 (68%), Gaps = 3/170 (1%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
GNK D +++V +FA FLE SA + NVEQ F + +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFK+++IGDSG GKS+LLL F +T+ E TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++ + W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
NK+D RVVS E A + ++E SAKT NVE+ F + + D
Sbjct: 121 NKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT+ TF N+ + W + I+ +++ +D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKN-WIRNIEQHAS-EDVEKMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D + +RVV+K+ G AREY F E SAK +NVE+ F
Sbjct: 121 NKCDVDDKRVVTKERGEQLAREYNVRFFETSAKANINVEEAF 162
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 126/185 (68%), Gaps = 4/185 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTPSLLS 183
+GNK D E +R+V G + A+E+G F E SAK +N+E+ F L IL TPS S
Sbjct: 120 IGNKCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKDS 179
Query: 184 EGSSG 188
+G
Sbjct: 180 GPEAG 184
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 104/221 (47%), Positives = 140/221 (63%), Gaps = 15/221 (6%)
Query: 1 MASSTSQ--QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG 57
MAS ++ ++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L
Sbjct: 1 MASGPARGRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELD 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119
Query: 118 QDCIKLLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
+ K+LVGNK D ES+R V G A E+G F E SAKT +NVEQ F +
Sbjct: 120 -NVNKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIA---R 175
Query: 177 DTPSLLSEGSSGVKKN---IFKESP---PQNDASTTGCCSS 211
D L+E + V+ I K P P A + CC+S
Sbjct: 176 DIKQRLAESDTKVEPQTIKINKPDPAKGPGKAAERSSCCTS 216
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 88/194 (45%), Positives = 132/194 (68%), Gaps = 13/194 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+++LL F+ + F + TIG+DFKI+ V + GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERF+T+T++YYRGA GI++VYD+T + +F N+ W + ID ++ N D K+L+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIK-TWMQNIDEHANN-DVEKMLLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D + +R +S ++G+ A + LF+E SAK+ +N+ + FE L I
Sbjct: 123 CDVDEKRQISFQQGLQLANSHNILFMETSAKSNINITEAFEALATGI----------KVK 172
Query: 189 VKKNIFKESPPQND 202
+++N+ +PP+ D
Sbjct: 173 MERNMDLNNPPRED 186
>gi|156087613|ref|XP_001611213.1| Rab1b [Babesia bovis]
gi|32492050|gb|AAP85297.1| Rab1b [Babesia bovis]
gi|154798467|gb|EDO07645.1| Rab1b [Babesia bovis]
Length = 221
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFK+++IGDSG GKS+LLL F DT+ E TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDYLFKIIIIGDSGAGKSSLLLRFADDTYSESYMSTIGVDFKIKTVKIDNVTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT R +F ++ W +I+ YS+ + KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIITVYDVTSRVSFESVKKTWLVDIEKYSS-ANISKLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
NKVD E R V+ E +FA + ++E SAKT NVE+ FE + + D
Sbjct: 121 NKVDLEDSRAVTYDEAREFAEQNNMDYIEASAKTAQNVEKAFESIARALKD 171
>gi|410730291|ref|XP_003671325.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
gi|401780143|emb|CCD26082.2| hypothetical protein NDAI_0G03050 [Naumovozyma dairenensis CBS 421]
Length = 210
Score = 179 bits (455), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F + +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSFDGVK-MWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D E +RVV +FA FLE SA NVE+ F + +I
Sbjct: 122 KCDLEDKRVVEYDVAKEFADSNKMPFLETSALNSTNVEEAFLTMARQI 169
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 6/200 (3%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDTA 69
D KLLLIG+SGVGKS+LLL F+ D F + T+G+DF++K++ L KK+KL IWDTA
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWDTA 64
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGNK
Sbjct: 65 GQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGNKC 122
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D E +RVV+ +EG A + G FLE SAK + V+ CF L ++ + E S
Sbjct: 123 DAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQSA 179
Query: 190 KKNIFKESPPQNDASTTGCC 209
+ I + +TGCC
Sbjct: 180 QPGIVDPTQQTQPTESTGCC 199
>gi|378727994|gb|EHY54453.1| GTP-binding protein ypt1 [Exophiala dermatitidis NIH/UT8656]
Length = 208
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 98/167 (58%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDT
Sbjct: 12 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 71
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGNK
Sbjct: 72 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D ++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 130 SDMADKKVVEYTMAKEFADSLGIPFLETSAKNASNVEQAFLTMARQI 176
>gi|366991921|ref|XP_003675726.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
gi|342301591|emb|CCC69361.1| hypothetical protein NCAS_0C03710 [Naumovozyma castellii CBS 4309]
Length = 211
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 128/188 (68%), Gaps = 6/188 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS---LLSE 184
K D +RVV +FA FLE SA NVE+ F + +I ++ S +
Sbjct: 122 KCDLTDKRVVEYDVAKEFADANKMPFLETSALNSTNVEEAFLTMARQIKESMSQQKMEDG 181
Query: 185 GSSGVKKN 192
G++G KN
Sbjct: 182 GANGGNKN 189
>gi|242020978|ref|XP_002430924.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516142|gb|EEB18186.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 206
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL F D F+ P TIGVDFK K + + G ++KLA+WDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFIDDKFDPDQPLTIGVDFKTKEMTVDGNRVKLALWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTL SYYR A G I+VYDV+ TF + D W E+D+Y+T + IK++VGNK+D E
Sbjct: 69 RFRTLIPSYYRDAHGAILVYDVSNYITFRKIED-WLNELDVYATKPNLIKIIVGNKIDLE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVK 190
+R V+K+EGI A+ + LF+E S KT+ V+ +ELV KI+ TP L S ++
Sbjct: 128 -KREVTKEEGIKLAKRHATLFIESSVKTKDGVQTAMQELVQKIIQTPGLWDPISHNLR 184
>gi|357628401|gb|EHJ77744.1| small GTP-binding protein [Danaus plexippus]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 117/168 (69%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLDLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T +D+F+N+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDQDSFSNVKQ-WLEEIDRYACDS-VNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +++ V +A + G FLE SAK NVEQ F + +I
Sbjct: 122 KCDLTTKKAVDYTTAKQYAEQLGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|328866656|gb|EGG15039.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 128/202 (63%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R TF N+ W +EID ++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRVTFDNVRQ-WLQEIDRFAC-ESVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV FA FLE SAK NVEQ F + +I + + S+ +
Sbjct: 122 KSDLVAKKVVDYNTAKAFADLLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-ASQPTQ 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V +N Q + +GCC
Sbjct: 181 TVDRNKVVPGTSQPIQAKSGCC 202
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
Q++D+L KLLLIGDSGVGKS LLL F+ D F TIG+DFKI+ V L GK++KL IW
Sbjct: 6 QQYDHLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIW 65
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++ YDVT +F N+ + W + I+ ++++ K+LVG
Sbjct: 66 DTAGQERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRN-WMRNIEQHASD-GVSKVLVG 123
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D E +RV+S ++G A+E+G F E SAK NV F + + L + G
Sbjct: 124 NKSDAEEKRVISTEQGEALAKEFGIPFFETSAKANTNVNDAF--FAIARIIKAGLKTSGD 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
G K PP S T CC
Sbjct: 182 GGGAG--VKLGPPPKAKSGTSCC 202
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S SQ+ +D L KLLLIGDSGVGKS LLL F D F TIG+DFKI+ + +G +++K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L +WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + + Y+ N+
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEGVEL 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNK D + +RVVS ++G A ++G FLE S+KT +NVE+CF + +I DT +
Sbjct: 120 ILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
SG I +N AS CC
Sbjct: 180 KGNESG-SGGINIAEGEENSASK--CC 203
>gi|351726990|ref|NP_001238169.1| GTP binding protein [Glycine max]
gi|450635|gb|AAA50159.1| GTP binding protein [Glycine max]
Length = 218
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 110/225 (48%), Positives = 131/225 (58%), Gaps = 32/225 (14%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT + N W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDGEESFNNVKQWLSEIDRYASD-NVNKLLVGN 122
Query: 128 KVDKESERVVSKKEGID---------------FAREYGCLFLECSAKTRVNVEQCFEELV 172
K D E+ R VS E D FA G F+E SAK NVEQ F +
Sbjct: 123 KCDLEANRAVSNIETADLEANRAVSNIETAKAFADGIGIPFIETSAKDATNVEQAFMAMT 182
Query: 173 LKILDTPSLLSEGSSGVKKNIFKESPP------QNDASTTGCCSS 211
I D + S+ ++ + PP Q A GCCSS
Sbjct: 183 ASIKD--RMASQPANNAR-------PPTVQIRGQPVAQKGGCCSS 218
>gi|296413144|ref|XP_002836276.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295630089|emb|CAZ80467.1| unnamed protein product [Tuber melanosporum]
Length = 201
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 105/211 (49%), Positives = 129/211 (61%), Gaps = 23/211 (10%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEAKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +V+DVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVFDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL---------DT 178
K D ++VV +FA G FLE SAK NVEQ F + +I +
Sbjct: 122 KSDIADKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKERMGSTTVNNK 181
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P++ + +GV++ S GCC
Sbjct: 182 PTVSVQQGTGVQQ-----------GSAGGCC 201
>gi|168028754|ref|XP_001766892.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681871|gb|EDQ68294.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 102/218 (46%), Positives = 137/218 (62%), Gaps = 18/218 (8%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMK 62
S S+ ++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++K
Sbjct: 6 SRSRADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 123 LLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+LVGNK D ES+R V +G A EYG F E SAKT +NVE F + D
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIA---RDIKQR 180
Query: 182 LSEGSSGVKKNIFKESPP---------QNDASTTGCCS 210
L+E S K K++ P Q ++ CCS
Sbjct: 181 LAESDS--KPEAAKDAKPDVKLLAGNAQTKPASASCCS 216
>gi|367000740|ref|XP_003685105.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
gi|357523403|emb|CCE62671.1| hypothetical protein TPHA_0D00270 [Tetrapisispora phaffii CBS 4417]
Length = 207
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NSVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
K D +RVV +FA + FLE SA NVE+ F + +I ++ S
Sbjct: 122 KSDMTDKRVVEYDVAKEFAEQNKMPFLETSALDSTNVEEAFLTMARQIKESIS 174
>gi|170579409|ref|XP_001894818.1| Ras-related protein Rab-18A [Brugia malayi]
gi|158598441|gb|EDP36329.1| Ras-related protein Rab-18A, putative [Brugia malayi]
Length = 194
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 90/169 (53%), Positives = 123/169 (72%), Gaps = 9/169 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F DTF+ E++ TIGVDF++ + + + DTAGQE
Sbjct: 11 LKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTSMMVNQNR------DTAGQE 64
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDV+ R TF L+ W E+D YST D +K+L+GNK+D
Sbjct: 65 RFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI- 122
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
S R V+++EG++FA+++ LF+E SAKTR V+ FEEL+ K+L TP L
Sbjct: 123 SSREVTREEGLEFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGL 171
>gi|50292669|ref|XP_448767.1| hypothetical protein [Candida glabrata CBS 138]
gi|49528079|emb|CAG61730.1| unnamed protein product [Candida glabrata]
Length = 206
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 100/185 (54%), Positives = 126/185 (68%), Gaps = 3/185 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +RVV +FA FLE SA NVE+ F + +I ++ + + S
Sbjct: 122 KCDLADKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESMTQQNMNES 181
Query: 188 GVKKN 192
KKN
Sbjct: 182 QQKKN 186
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 134/207 (64%), Gaps = 10/207 (4%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++++D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+A W + ID +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D RVVS++ G A ++G FLE SAK + +++ F +L ILD +
Sbjct: 120 LGNKCDMADRRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDK---MPN 176
Query: 185 GSSGVKKNIFKESPPQNDAST--TGCC 209
K+ + P + AST GCC
Sbjct: 177 KEENAKQPTIR--PVDSGASTGRVGCC 201
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +VV + FA E G FLE SAK +NVEQ F
Sbjct: 122 KCDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 93/176 (52%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTP 179
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL TP
Sbjct: 120 LGNKCDMEDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 179 bits (453), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 12/210 (5%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKIK V + GKK+KL
Sbjct: 2 AKKAYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T+ TF N+A W + ID +++ + +++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIDEHAS-EGVERMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL---DTPSL 181
+GNK D +R+ SK++G ARE+ F E SAK + VE+ F L IL +
Sbjct: 120 LGNKCDMNDKRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGAT 179
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ ++GV P +N A CCS+
Sbjct: 180 QDQATTGV------VIPKENRAKPANCCST 203
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D+ FK+LLIGDSGVGKS LLL F D++ + TIGVDFKIK + L GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYD T +D+F N+ W EI+ Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIERYAC-ENVNKLLVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF-------EELVLKILDTPS 180
K D +E+VV + FA G F+E SAK NVE+CF + + I D+PS
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDIKNRLADIQDSPS 183
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 96/162 (59%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V GK KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D +VV + FA E G FLE SAK +NVEQ F
Sbjct: 121 NKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAF 162
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 137/209 (65%), Gaps = 13/209 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S + +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F+N+ W + ++ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL----KILDTPS 180
+GNK D E +RVVS ++G A E G FLE SAK+ +N++Q F L +++D
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQK 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ SSGV +NDA++ CC
Sbjct: 181 TDTGTSSGVNVG------EKNDAASGKCC 203
>gi|167387029|ref|XP_001737993.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898955|gb|EDR25679.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 199
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D KLLLIG+SGVGKS+LLL F+ D F + T+G+DF++K++ L KK+KL IWD
Sbjct: 3 EKDSTIKLLLIGESGVGKSSLLLRFSEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIWD 62
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+ SSYYRG GI++VYD+T R++F N+ + W + I+ + +Q+ K+LVGN
Sbjct: 63 TAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D E +RVV+ EG A + G FLE SAK + V+ CF L ++ + E S
Sbjct: 121 KCDAEDKRVVTSVEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQR---IGESSQ 177
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ I + +TGCC
Sbjct: 178 SAQPGIVDPTQQTQPTESTGCC 199
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 115/162 (70%), Gaps = 2/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFK+++IGDSG GKS+LLL F +T+ E TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++ W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVC-KLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK+D RVVS +E A + ++E SAKT NVE+ F
Sbjct: 121 NKIDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAF 162
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 95/174 (54%), Positives = 124/174 (71%), Gaps = 4/174 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG-GKKMKLAIWDTAGQ 71
FKLLLIGDSGVGKS+LL+ +T+D FE +LS TIGVDFK+K V + G K+KL+IWDTAGQ
Sbjct: 12 FKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTAGQ 71
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT + YRG+ + VYDV R++F NL I +E+ YS N + IKLLVGNK+D
Sbjct: 72 ERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IRMEELKTYSDNPNMIKLLVGNKID- 129
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
R++S++EG+ FAR Y + E SAKT V Q F ++V KI + L ++G
Sbjct: 130 SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQG 183
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 179 bits (453), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/169 (57%), Positives = 115/169 (68%), Gaps = 3/169 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
NK D +VV FA E G FLE SAK ++VEQ F + +I
Sbjct: 121 NKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSISVEQAFLTMTAEI 169
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/206 (45%), Positives = 130/206 (63%), Gaps = 4/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D +R V K+ G + ARE+ F+E SAK N+E F EL ILD + E
Sbjct: 120 LGNKCDMADKRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILDKVA-GKE 178
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
+ + + S + + CC+
Sbjct: 179 TTDNPDRVVVNRSTGERLPAYKACCT 204
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 136/212 (64%), Gaps = 13/212 (6%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
+S +DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 67
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+
Sbjct: 68 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS-VN 125
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILD 177
K+L+GNK D ++VV G A EYG FLE SAK +NVE+ F +++ +++D
Sbjct: 126 KMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMID 185
Query: 178 TPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
TP+ + S K ++P + GCC
Sbjct: 186 TPNEPPQLHS---KPDLTQNP---NNKKRGCC 211
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 135/214 (63%), Gaps = 13/214 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 125 VGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
VGNK D ES+R V +G A EYG F E SAKT +NVE+ F + D L+
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLA 182
Query: 184 EGSSGVKKNIFKESPPQNDA------STTGCCSS 211
E S + K + P A T+ CC S
Sbjct: 183 ESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS 216
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 121/177 (68%), Gaps = 9/177 (5%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V + G +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQIWDTA 65
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ESVIKLLIGNKC 123
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL------DTPS 180
D E ER V+ ++G + A F+E SAK +NV++ F ++ I+ +TPS
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMKNLQTSNTPS 180
>gi|168027123|ref|XP_001766080.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682723|gb|EDQ69139.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/216 (45%), Positives = 140/216 (64%), Gaps = 14/216 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMK 62
S ++ ++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++K
Sbjct: 6 SRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 123 LLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILD 177
+LVGNK D ES+R V +G A E+G F E SAKT +NVE F ++ ++ +
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEFGIKFFETSAKTNMNVEDVFFTIARDIKQRLAE 183
Query: 178 T---PSLLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
T P ++ + GVK Q A+ + CCS
Sbjct: 184 TDSKPEQPAKAAPGVK---LSAGGAQPKAAGSSCCS 216
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 128/205 (62%), Gaps = 5/205 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S +FD LFK+LLIGDSG GKS LL+ F + F + TIGVDFKIK + + GK +K+
Sbjct: 2 STADFDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
+WDTAGQERFRT+T+SYYRG+ GII+VYDVT RD+F ++ + W KEID + C +L+
Sbjct: 62 VWDTAGQERFRTITASYYRGSNGIILVYDVTNRDSFDHI-NYWMKEIDRLAAPDVC-RLI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNK D +RVV+ +EG A++YG FLE SA NVE+ F + + S
Sbjct: 120 VGNKSDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKKQGATSG 179
Query: 185 GSSGVKKNIFKESPPQNDASTTGCC 209
G +G N P + +GC
Sbjct: 180 GENG--GNAVPLKPAKKVEGESGCA 202
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 130/199 (65%), Gaps = 4/199 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ +L F+ D+F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEG 185
NK D E R VS++ G A EYG F+E SAK +NVE+ F L I L T E
Sbjct: 121 NKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEH 180
Query: 186 SSGVKKNIFKESPPQNDAS 204
++ I P+ +S
Sbjct: 181 TTQNTGRITVHQTPRKSSS 199
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/161 (59%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ N+ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYA-NESVCKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +VV + G A E G FLE SAK +NVEQ F
Sbjct: 122 KCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAF 162
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/183 (49%), Positives = 126/183 (68%), Gaps = 7/183 (3%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKM 61
+S +DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++
Sbjct: 8 ASNKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRI 67
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T +
Sbjct: 68 KLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT-ESVN 125
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILD 177
K+L+GNK D ++VV G A EYG FLE SAK +NVE+ F +++ +++D
Sbjct: 126 KMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMID 185
Query: 178 TPS 180
TP+
Sbjct: 186 TPN 188
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 121/172 (70%), Gaps = 3/172 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL
Sbjct: 120 LGNKCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 134/211 (63%), Gaps = 16/211 (7%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAI 65
QQ++DYLFK+LLIG+S VGKS+LLL F+ F E PTIGVDFKI+ + GK +K+ I
Sbjct: 4 QQDYDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQI 63
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERF+T+T+SYY+GA GII+ YD+T + +F ++ + W E++ +++ ++ ++LLV
Sbjct: 64 WDTAGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLV 121
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-------DT 178
GNK D ES+R V+ +EG + A G F+E SAK NV+Q F L I D
Sbjct: 122 GNKADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDK 181
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P+ + +G KN PQ CC
Sbjct: 182 PTPGGKTPTGGLKN------PQPTKKEGTCC 206
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 93/185 (50%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK V++E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 134/206 (65%), Gaps = 8/206 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHKILIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +N+E+ F L +I +DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSEQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
GS GV +I ++ P N ++ CC
Sbjct: 183 PGSQGV--SIDQQGPGPNGSTGGKCC 206
>gi|254570669|ref|XP_002492444.1| hypothetical protein [Komagataella pastoris GS115]
gi|238032242|emb|CAY70249.1| hypothetical protein PAS_chr3_1167 [Komagataella pastoris GS115]
gi|328353543|emb|CCA39941.1| Ras-related protein Rab-1A [Komagataella pastoris CBS 7435]
Length = 203
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ ++ TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ + W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNV-NQWLQEIDRYATG-GVMKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + ++VV +FA +E SA NVEQ F + +I GS
Sbjct: 122 KSDLKDKKVVDYTVAKEFADALEIPLIETSALDSTNVEQAFFNMARQIKSQMVNNQAGSG 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K +I + + CC
Sbjct: 182 TEKASINLRGQSVGGSQNSSCC 203
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F NL W +E+D Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQ-WLEEVDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D+ +++VV ++A + FLE SAK NVEQ F + +I + S +
Sbjct: 122 KCDEVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAV 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ + + + +GCC
Sbjct: 182 TESAKVKIDQGRTIETNKSGCC 203
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 138/213 (64%), Gaps = 17/213 (7%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S + +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL
Sbjct: 2 SSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ ++T + K+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFANVEQHAT-EGVNKI 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTP 179
L+GNK D E +R VSK++G A E G FLE SAK +N+E+ F ++ +I+DT
Sbjct: 120 LIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTS 179
Query: 180 SL-LSEGSSGVKKNIFKESPPQNDASTTG--CC 209
S S GSSGV + N S +G CC
Sbjct: 180 SKEASGGSSGV-------NVADNSGSGSGGKCC 205
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 136/211 (64%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIG---RDIKQRLAETD 185
Query: 187 SGVKKNIFKESPPQNDAST------TGCCSS 211
S + + + +PP + A + + CC S
Sbjct: 186 SKAEPHTIRINPPDHAAGSAETPAKSACCGS 216
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+E DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V + GK +KL IW
Sbjct: 3 EEKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGAQGII+VY V TF N+ W +EI+ Y++ + IKLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D + ER V+ ++G + A F+E SAK +NV++ F + I+
Sbjct: 121 NKCDLDDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIRIATDIM 170
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 135/215 (62%), Gaps = 20/215 (9%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSF--------------TSDTF-EELSPTIGVDFKIKHV 54
FD LFK+LLIGDSGVGKS LLL F T DT+ + TIGVDFKIK +
Sbjct: 16 FDSLFKILLIGDSGVGKSCLLLRFAGLLKLFYKLRNNDTDDTYTDSYISTIGVDFKIKTI 75
Query: 55 ALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLY 114
+ K +KL IWDTAGQERFRT+TSSYYRGAQGII+VYDVT RD+F N+ + W EI+ Y
Sbjct: 76 EIDDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKY 134
Query: 115 STNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLK 174
++ +D K+L+GNK+D +++R VS +EG + A FLE SAK NVEQ F+ + +
Sbjct: 135 AS-EDVQKILIGNKIDLKNDRSVSYEEGKELAESCNIQFLETSAKISHNVEQAFKTMAYE 193
Query: 175 ILDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
I + L E + NI + P D + CC
Sbjct: 194 IKNKSQL--ENQQKGRANINLNAKPIKD-NKKKCC 225
>gi|444317447|ref|XP_004179380.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
gi|387512421|emb|CCH59861.1| hypothetical protein TBLA_0C00450 [Tetrapisispora blattae CBS 6284]
Length = 210
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK + + GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYSNDYISTIGVDFKIKTIEIDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +D+F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQDSF-NSVKMWLQEIDRYATSS-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
K D + +R+V +FA FLE SA NVE+ F + +I ++ S
Sbjct: 122 KSDLKDKRIVEYDVAKEFAETNNMPFLETSALDSTNVEEAFLTMAKQIKESLS 174
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 7/176 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+ K+L+GNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS-VNKMLIGNK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPS 180
D ++VV G A EYG FLE SAK +NVE+ F +++ +++DTP+
Sbjct: 130 CDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN 185
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +++E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 134/216 (62%), Gaps = 22/216 (10%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATSA-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D + +R+V +FA FLE SA NVE+ F + +I ++ + +G
Sbjct: 122 KCDLDGKRMVEYDVAKEFAESNNMPFLETSALDSTNVEEAFLTMARQIKESFAQQKIQDG 181
Query: 186 SSGVKKNIFKESPPQNDAS------------TTGCC 209
S N S QND S T CC
Sbjct: 182 S-----NANANSNLQNDKSNVNLNGQSLTNATNNCC 212
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 130/197 (65%), Gaps = 4/197 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D+F TIG+DFKI+ + + GKK+KL IWDT
Sbjct: 19 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQIWDT 78
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++GNK
Sbjct: 79 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIGNK 136
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGSS 187
D E R VS++ G A EYG FLE SAK +NVE+ F L I L T + ++
Sbjct: 137 CDVEERRQVSRERGEQLAIEYGTKFLETSAKANINVEEAFFTLARDIKLKTERASHQCTT 196
Query: 188 GVKKNIFKESPPQNDAS 204
I E P + AS
Sbjct: 197 QNTGRISMEQPQKKSAS 213
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRHIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 123/185 (66%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+D KIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/212 (44%), Positives = 137/212 (64%), Gaps = 16/212 (7%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI D ++
Sbjct: 121 SDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINN 180
Query: 185 GSSGVKKNIFKESP-------PQNDASTTGCC 209
++G+K + ++P P + GCC
Sbjct: 181 EANGIK--LGPQNPSNPSTSVPDRPPQSGGCC 210
>gi|164660430|ref|XP_001731338.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
gi|159105238|gb|EDP44124.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
Length = 229
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF--EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQ 71
KLLLIG SGVGKS L+ +T D F E+ + TIGVD+KIK + + GK KL+IWDTAGQ
Sbjct: 13 LKLLLIGSSGVGKSALVRRYTDDVFVEEDAAATIGVDYKIKSLCVDGKWFKLSIWDTAGQ 72
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ER+RTLTSSYYRGAQG++++YDVT ++ ++ W E+ + + + LL GNKVD
Sbjct: 73 ERYRTLTSSYYRGAQGVVILYDVTDLRSYEDVPQ-WVHELRTFEGDVPPVCLLAGNKVDI 131
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKK 191
ER VS ++G +A+E G LF+ECSAK V+ F+ELV K++ TP+L + GV++
Sbjct: 132 AEERQVSTEQGQAYAQENGMLFVECSAKAGQGVDHAFDELVRKVVSTPALWLHVAPGVRR 191
>gi|392579393|gb|EIW72520.1| hypothetical protein TREMEDRAFT_26769 [Tremella mesenterica DSM
1558]
Length = 187
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/178 (52%), Positives = 120/178 (67%), Gaps = 5/178 (2%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKM 61
T +E K+LL+G+S VGKS+LLL FT D F E+ TIGVDFK+ + + KK
Sbjct: 6 TGDEESPISIKILLVGNSSVGKSSLLLRFTEDDFLADEDTIATIGVDFKVTRLEVDEKKY 65
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KLAIWDTAGQERFRTLT+SYYRGAQG+++VYD+T R TF L W +E+D Y + +
Sbjct: 66 KLAIWDTAGQERFRTLTASYYRGAQGVVLVYDMTSRKTFDELLR-WDRELDTYCGDS-IV 123
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
KL++GNK DK R V+ +EG FA G LF+ECSAKT +E+ F ELV K+ P
Sbjct: 124 KLILGNKADKSLARQVTTEEGKAFAESLGALFMECSAKTNEGIEEAFRELVRKVSGIP 181
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 94/159 (59%), Positives = 112/159 (70%), Gaps = 3/159 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ C KLLVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNKC 122
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
D +VV +E FA G FLE SAK +NVE+ F
Sbjct: 123 DLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 161
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKETYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTP 179
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 133/209 (63%), Gaps = 11/209 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W K I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVSKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D LSE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIA---RDIKQRLSEAD 185
Query: 187 SGVKKNIFKESPPQNDASTTG----CCSS 211
S + K + + ++ G CC S
Sbjct: 186 SKPEGGTIKINTEGDASAAAGQKSACCGS 214
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 128/208 (61%), Gaps = 12/208 (5%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D + + TIGVDFKI+ + GK +KL IW
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ + C KLL+G
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYANDSVC-KLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-----DTPSL 181
NK D +VVS + G A E G FLE SAK NVEQ F + +I T +
Sbjct: 121 NKNDMVESKVVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNAN 180
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ GS V+ K P Q + + GCC
Sbjct: 181 KTSGSGTVQ---MKGQPIQQN-NGGGCC 204
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/218 (46%), Positives = 137/218 (62%), Gaps = 18/218 (8%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMK 62
S ++ ++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++K
Sbjct: 6 SRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIK 65
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 123 LLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+LVGNK D ES+R V +G A EYG F E SAKT +NVE F + D
Sbjct: 124 ILVGNKADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIA---RDIKQR 180
Query: 182 LSEGSSGVKKNIFKESPP---------QNDASTTGCCS 210
L+E S K K + P Q +++ CCS
Sbjct: 181 LAETDS--KPEAAKNAKPDVKLLAGNSQQKPASSSCCS 216
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 97/166 (58%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ V L GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 69
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+ + C KLLVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 127
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D +VV + FA E G FLE SAK NVEQ F + +I
Sbjct: 128 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 173
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 131/202 (64%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKVVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ N+ ++PP + CC
Sbjct: 182 VTRPNL--QNPPTAKKDDS-CC 200
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 123/176 (69%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTP 179
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|357163775|ref|XP_003579842.1| PREDICTED: GTP-binding protein YPTM1-like [Brachypodium distachyon]
Length = 212
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 110/162 (67%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
EFDYLFKLLLIGDS VGKS LL F D + + TIGVDFKI+ V + GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDAYVDSYISTIGVDFKIRTVEIDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGANGIIIVYDITDMESFNNVKQ-WLSEIDKYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D RVV +A E G FLE SAK +NVE+ F
Sbjct: 121 NKCDLAESRVVDTSVAQAYADEIGIPFLETSAKDSINVEEAF 162
>gi|391330041|ref|XP_003739473.1| PREDICTED: ras-related protein Rab-3-like [Metaseiulus
occidentalis]
Length = 218
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 130/210 (61%), Gaps = 14/210 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
+++ Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K V K++K
Sbjct: 8 ASTDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRHDKRVK 67
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQER+RT+T++YYRGA G I++YDVT D+F + D W +I YS + +
Sbjct: 68 LQIWDTAGQERYRTITTAYYRGAMGFILMYDVTNEDSFKCVQD-WVTQIKTYSWDNAQV- 125
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT---- 178
+LVGNK D E ERVVS G A + G F E SAK +NV+QCFE LV I D
Sbjct: 126 VLVGNKCDMEDERVVSTDRGRQLAEQLGLEFFETSAKENINVKQCFERLVDIICDKMSET 185
Query: 179 ----PSLLSEGSSGVK---KNIFKESPPQN 201
PSL+S + G + N K P QN
Sbjct: 186 LDADPSLVSGANKGTRLTDNNAPKGGPGQN 215
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 135/214 (63%), Gaps = 13/214 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 125 VGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
VGNK D ES+R V +G A EYG F E SAKT +NV++ F + D L+
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIA---RDIKQRLA 182
Query: 184 EGSSGVKKNIFKESPPQNDA------STTGCCSS 211
E S + K + P A T+ CC S
Sbjct: 183 ESDSKTEPQTLKINQPDQGAGSAQASQTSSCCGS 216
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 130/199 (65%), Gaps = 4/199 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ +L F+ D+F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMIIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEG 185
NK D E R VS++ G A EYG F+E SAK +NVE+ F L I L T E
Sbjct: 121 NKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQEN 180
Query: 186 SSGVKKNIFKESPPQNDAS 204
++ I P+ +S
Sbjct: 181 TTQNTGRITVHQTPRKSSS 199
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|66810383|ref|XP_638915.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208510|sp|P34139.2|RAB1A_DICDI RecName: Full=Ras-related protein Rab-1A
gi|60467471|gb|EAL65493.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 128/202 (63%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT + TF N+ W +EID ++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV FA FLE SAK NVEQ F + +I + + S+ +
Sbjct: 122 KSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-ASQPTQ 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V KN + +GCC
Sbjct: 181 TVDKNKVVPGSSAPISPKSGCC 202
>gi|389593257|ref|XP_003721882.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
gi|321438384|emb|CBZ12137.1| putative small GTP-binding protein Rab1 [Leishmania major strain
Friedlin]
Length = 200
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++ V + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 188 GVKKNIFKESPP 199
+ N+ ++PP
Sbjct: 182 AARPNL--QNPP 191
>gi|384485106|gb|EIE77286.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 207
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 104/203 (51%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 69
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+VYDVT D+F ++ W +EID Y+ + KLLVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDEDSFQHVKQ-WMQEIDRYAA-EGVNKLLVGNKS 127
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD---TPSLLSEGS 186
D ++ VS ++ +FA LE SAK NVEQ F + +I D T ++
Sbjct: 128 DLTDKKAVSTEQANEFAESIKISLLETSAKDATNVEQAFLTMAKQIKDRMGTTMQQTQTK 187
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
S VK P+ GCC
Sbjct: 188 STVKVGQGASLEPKQSG---GCC 207
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 139/213 (65%), Gaps = 19/213 (8%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPT----IGVDFKIKHVALGGK 59
+ + FD KLL+IGDSGVGK+ LLL + +D+F SPT IG+DFKIK++ L GK
Sbjct: 19 ARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSF---SPTFITTIGIDFKIKNIELDGK 75
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
K+KL IWDTAGQERFRT+T+SY+RGAQGI++VYDVT R +F ++ + W +I ++ +
Sbjct: 76 KIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA-DVH 133
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
K+L+GNK D ++V+S +EG A EYG F E SAK +NVE F ++ ++ +
Sbjct: 134 VNKILIGNKCDMMDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVKN-- 191
Query: 180 SLLSEGSSGVKKNI---FKESPPQNDASTTGCC 209
L+ EG S K++I K PP+ GCC
Sbjct: 192 RLMEEGGSHKKESINLSAKAIPPKK-----GCC 219
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDMERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|348522973|ref|XP_003448998.1| PREDICTED: ras-related protein Rab-1A-like [Oreochromis niloticus]
Length = 212
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 121/178 (67%), Gaps = 5/178 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDMDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQ-WLDEIDRYAC-ENVSRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG 185
K D S++VV D A FLE SAK+ NVE+ F + +I L SEG
Sbjct: 122 KSDLVSKKVVDAATAQDLASSLKIPFLETSAKSSDNVERAFLTMASEI--HKRLASEG 177
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 131/208 (62%), Gaps = 7/208 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT NVEQ F + I + +
Sbjct: 129 KADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQRIAESDSKA 188
Query: 187 SGVKKNIFKESPPQNDAST---TGCCSS 211
+ I K P A+ + CC S
Sbjct: 189 EPLTIKISKPDPAIGSATAQEKSACCGS 216
>gi|384497072|gb|EIE87563.1| GTP-binding protein ypt1 [Rhizopus delemar RA 99-880]
Length = 204
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 97/170 (57%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT D+F N+ W +EID Y+ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDADSFNNVKQ-WLQEIDRYAA-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
K D ++ V + +FA LE SAK NVEQ F + +I D
Sbjct: 122 KSDLVDKKAVETDQAKEFADGLSIPLLETSAKDATNVEQAFLTMAKQIKD 171
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 133/210 (63%), Gaps = 13/210 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D LSE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIA---RDIKQRLSESD 185
Query: 187 SGVKKNIFKESPPQNDASTTG-----CCSS 211
S + K P+ +A G CC S
Sbjct: 186 SKPEGGTIK-IKPEGEADAAGAQKSACCGS 214
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIDKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++ V + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKTRLAVSGETKS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
+ N+ P+ + + CC
Sbjct: 182 VSRPNLQNPPAPKKEDN---CC 200
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKN-WIRNIEEHASS-DVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
D R VSK+ G A +YG FLE SAKT +NVE+ F L I+
Sbjct: 123 CDMNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDIM 170
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/214 (44%), Positives = 142/214 (66%), Gaps = 12/214 (5%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGK 59
MA+S + +DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK
Sbjct: 1 MATSKNAS-YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGK 59
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERFRT+T++YYRGA GI++ YDVT +F N+ + W + I+ +++ +
Sbjct: 60 RIKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRN-WIRNIEQHAS-EG 117
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKI 175
K+L+GNK D ++V+SK++G A E+G FLE SAK+ + VE+ F ++ ++
Sbjct: 118 VNKILIGNKCDILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKRL 177
Query: 176 LDTPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+DT ++ + N+ + +A+T GCC
Sbjct: 178 IDTAQEKTDLKTAGNVNV----NQKGNAATAGCC 207
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 177 bits (448), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 125/204 (61%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D + + TIGVDFKI+ + GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ N+ KLL+GN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLIGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +VVS + G A E G FLE SAK +NVEQ F + +I +
Sbjct: 122 KNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANK 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+SG K P Q + GCC
Sbjct: 182 TSGPGTVQMKGQPIQQNNG--GCC 203
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 132/207 (63%), Gaps = 10/207 (4%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
QE+D+LFKL+LIG+SGVGKS +L+ + +TF + TIGVDFKIK + L GK++KL IW
Sbjct: 11 QEYDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQIW 70
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQ+RF+T+T++YYRGA GI++VYDVT + +F N+ W EI+ Y+ C KLL+G
Sbjct: 71 DTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVK-TWMSEIEKYAQENVC-KLLIG 128
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D +RVVS +EG A F+E SAK N++ FE + +L S +
Sbjct: 129 NKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNNIDSAFESMAQDVLIRISDIKTQQ 188
Query: 187 SGVKKNIFKESPPQN----DASTTGCC 209
++ + P QN +S+ GCC
Sbjct: 189 DNERRRL---KPGQNVSEQKSSSEGCC 212
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 136/206 (66%), Gaps = 7/206 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ LL+ + ++ TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKSYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI+M+YD+T R TF N+ W K I Y++ +D KL+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNI-QTWMKNICDYAS-EDVEKLV 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTPSLLS 183
VGNK D ++ R VS +EG + AR + FLE SA T NV + FEEL L IL TP+
Sbjct: 120 VGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRGH 179
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
E S+ + + + P N S + CC
Sbjct: 180 EPSTVTQSHRLVD--PLNSKSES-CC 202
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 129/204 (63%), Gaps = 7/204 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
++DYLFK+L+IG+SGVGKS LLL F D F + TIGVDFKI+ + L GK +KL IW
Sbjct: 4 NDYDYLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQIW 63
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T SYYRG+ GI++VYD+T RD+F + W EID +++ QD +LLVG
Sbjct: 64 DTAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQH-WMSEIDNHAS-QDVCRLLVG 121
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEG 185
NK D +R V +EG AR++G F+E SAK +NVE F + + + + G
Sbjct: 122 NKADL-PDRAVKTEEGEALARQFGIPFMETSAKESLNVENMFITMATSMKKKVGGMAASG 180
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
SS + + N S GCC
Sbjct: 181 SSNGGQVTIAKGQSVNQKS--GCC 202
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 125/204 (61%), Gaps = 7/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDS VGKS LLL F D + + TIGVDFKI+ + GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EID Y+ N+ KLL+GN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLIGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +VVS + G A E G FLE SAK +NVEQ F + +I +
Sbjct: 122 KNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNANK 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+SG K P Q + GCC
Sbjct: 182 TSGPGTVQMKGQPIQQNNG--GCC 203
>gi|1370198|emb|CAA98176.1| RAB8E [Lotus japonicus]
Length = 215
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 135/207 (65%), Gaps = 9/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIHNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R V +G A EYG F E SAKT +NVE+ F ++ ++ DT S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSSK 188
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+E +G+K N + A + CC
Sbjct: 189 TE-PTGIKINPQDKGSAGEAAQKSACC 214
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 138/218 (63%), Gaps = 10/218 (4%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGK 59
MA+ +++D+LFKL+LIGDSGVGKS LLL F+ D F E TIGVDF+ + + + +
Sbjct: 1 MAAGGRPRDYDHLFKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNE 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
+KL IWDTAGQERFRT+TS+YYRGA GI++VYDVT RD+F ++ D W E++ Y+
Sbjct: 61 IVKLQIWDTAGQERFRTITSAYYRGADGIVLVYDVTDRDSFGHV-DEWLAEVNRYANENT 119
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKIL 176
C K+LVGNK +K +R VS +EG A E G F+E SAK +NV++ F + ++K+
Sbjct: 120 C-KILVGNKCEKADDRQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMK 178
Query: 177 DTPSLLSEGSSGVKKNIFKESPPQND----ASTTGCCS 210
+ S S+G + P + A +G CS
Sbjct: 179 QSASAAGGRSAGPQGMRIASQPTGAENRAMAQRSGNCS 216
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKKRLAETD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P AS + CC S
Sbjct: 186 SKAEPQTIKINQPDQAASGGQAAQKSACCGS 216
>gi|363748678|ref|XP_003644557.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888189|gb|AET37740.1| hypothetical protein Ecym_1518 [Eremothecium cymbalariae
DBVPG#7215]
Length = 204
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 107/208 (51%), Positives = 134/208 (64%), Gaps = 14/208 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLQEIDRYGT-AGVVKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS- 186
K D + ++VV + +FA LE SA NVE+ F + +I +T S + +
Sbjct: 122 KNDLKDKKVVDFEVAKEFADSLSIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKDTG 181
Query: 187 -----SGVKKNIFKESPPQNDASTTGCC 209
SGV N+ +S S++GCC
Sbjct: 182 KKDDKSGV--NLKGQSLT---GSSSGCC 204
>gi|88192430|pdb|2BCG|Y Chain Y, Structure Of Doubly Prenylated Ypt1:gdi Complex
Length = 206
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 134/206 (65%), Gaps = 9/206 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +RVV +FA FLE SA NVE F + +I ++ S + +
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQNLNET 181
Query: 188 GVKK----NIFKESPPQNDASTTGCC 209
KK N+ Q+ +T GCC
Sbjct: 182 TQKKEDKGNV--NLKGQSLTNTGGCC 205
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 140/211 (66%), Gaps = 23/211 (10%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
+ + FD+ FKL+L+GDS GKS+++ FT D F E++SPTIGVDFK+K + + KK+KL
Sbjct: 2 TSKAFDHNFKLVLVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLT 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
I+DTAG A GII+VYDVTR +TF N+ + W KE DLYST ++C+KLL
Sbjct: 62 IFDTAG-------------NAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLL 107
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK+D + ER VS ++ +FA+ +++E SAKT+ NV++ FEE+V +IL+T +LL E
Sbjct: 108 IGNKIDLKEERKVSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLL-E 166
Query: 185 GSSGVKK------NIFKESPPQNDASTTGCC 209
+ V+ NI P +++ +GCC
Sbjct: 167 STEPVRNKPTDNVNISTSEPNESEGG-SGCC 196
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/215 (44%), Positives = 140/215 (65%), Gaps = 19/215 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SA+T NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPP----------QNDASTTGCC 209
++G+K I ++ P Q ++++GCC
Sbjct: 181 EANGIK--IGQQHSPTYPALPGTGSQAGSASSGCC 213
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 128/209 (61%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ V + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ N KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSLLS 183
K D R V +A+E G FLE SAK +NVE+ F + I + + L
Sbjct: 122 KCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 184 EGSSGVKKNIFKESPPQNDAS-TTGCCSS 211
S V + K P Q + ++ CCS+
Sbjct: 182 RKPSNVVQ--MKGRPIQQEQQKSSRCCST 208
>gi|330845485|ref|XP_003294614.1| Rab GTPase [Dictyostelium purpureum]
gi|325074885|gb|EGC28854.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 105/204 (51%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT + TF N+ W +EID ++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV FA FLE SAK NVEQ F + +I + + S+ +
Sbjct: 122 KSDLVAKKVVDYNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-ASQPTQ 180
Query: 188 GVKKNIFKESPPQNDASTT--GCC 209
KN K P Q+ +T GCC
Sbjct: 181 TPDKN--KVVPGQSAPISTKSGCC 202
>gi|156616376|ref|NP_001096112.1| uncharacterized protein LOC100124616 [Danio rerio]
gi|152012662|gb|AAI50405.1| Zgc:171927 protein [Danio rerio]
Length = 210
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + + GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQ-WLEEIDRYAC-ENVSKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D S++VV ++F LE SAK NVE+ F
Sbjct: 122 KSDLSSKKVVDFTTAMEFTESLKIPLLETSAKNANNVEKAF 162
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 133/208 (63%), Gaps = 12/208 (5%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
E+DYLFKLLLIGDSGVGKS LLL F +T+ ++ TIGVDFKI+ + L GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N + W +EID Y+T+ KLLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESF-NDVNQWLQEIDRYATS-GVQKLLV 119
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSL 181
GNK D ++VV +FA G F+E SA NVEQ F +++ ++ P+
Sbjct: 120 GNKCDLTDKKVVDYAVAKEFADSRGIPFIETSAAESTNVEQAFILMSKQIKAQMASQPTN 179
Query: 182 LSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ G V N+ + N+ GCC
Sbjct: 180 NAAGKPSV--NLSGTAVNTNEG---GCC 202
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 104/218 (47%), Positives = 134/218 (61%), Gaps = 21/218 (9%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEG-------------IDFAREYGCLFLECSAKTRVNVEQCFEELVLK 174
K D + +VVS + FA E G F+E SAK NVEQ F + +
Sbjct: 122 KCDLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMAAE 181
Query: 175 ILDTPSLLSEGSSGVKKNIFK-ESPPQNDASTTGCCSS 211
I + + S+ + + + P N + GCCS+
Sbjct: 182 IKN--RMASQPVNNARPPTVQIRGQPVNQKA--GCCST 215
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 136/211 (64%), Gaps = 13/211 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
+ S + +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++K
Sbjct: 3 APSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVK 62
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W + ++ ++T + K
Sbjct: 63 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIR-TWFQNVEQHAT-EGVNK 120
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL----KILDT 178
+L+GNK D E +RVVS ++G A E G FLE SAK+ +N++Q F L +++D
Sbjct: 121 ILIGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDN 180
Query: 179 PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ SSGVK Q+D + CC
Sbjct: 181 QKTDAGVSSGVKVG------EQSDNGGSKCC 205
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/207 (43%), Positives = 135/207 (65%), Gaps = 8/207 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
+D+L KLLLIGDSGVGKS LLL F D + TIG+DFKI+ + L GK++KL IWD
Sbjct: 5 HYDFLIKLLLIGDSGVGKSCLLLRFCDDAWTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++V+DVT + +F N+ W I+ +++ + K+L+GN
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENV-RTWHANIEQHAS-EGVSKILIGN 122
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D E +R V+ ++G + A+E G ++E SAK+ NVE+ F E+ +++DT ++
Sbjct: 123 KSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAVTQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCCS 210
+ N+ S P+ + GCCS
Sbjct: 183 ASPAAASANVNVNSAPKTGGA-GGCCS 208
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ QD K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKN-WIRNIEEHAS-QDVEKMVLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
D E R VSK+ G A EYG F+E SAK +NVE+ F
Sbjct: 123 CDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAF 162
>gi|290563002|gb|ADD38895.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 211
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 91/194 (46%), Positives = 129/194 (66%), Gaps = 13/194 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKN-WIRNIEEHAS-ADVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D R V+K++G D A EYG F+E SAK+ +NVE+ F L I +
Sbjct: 123 CDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDI----------KAK 172
Query: 189 VKKNIFKESPPQND 202
++K + +PP+ D
Sbjct: 173 MEKRLEASNPPRQD 186
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D +SE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRISETD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P AS + CC S
Sbjct: 186 SRAEPQTIKINQPDPSASGGQAAQKSACCGS 216
>gi|349484|gb|AAA18826.1| GTP-binding protein homologue [Leishmania major]
Length = 200
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/192 (49%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGD+GVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDTGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++ V + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKS 181
Query: 188 GVKKNIFKESPP 199
+ N+ ++PP
Sbjct: 182 AARPNL--QNPP 191
>gi|156847653|ref|XP_001646710.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
gi|156117390|gb|EDO18852.1| hypothetical protein Kpol_1023p21 [Vanderwaltozyma polyspora DSM
70294]
Length = 207
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 13/209 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVQLDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYD+T +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDITDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL------ 181
K D +RVV +FA FLE SA NVE+ F + +I ++ S
Sbjct: 122 KCDLNDKRVVEYDVAKEFAEANKMPFLETSALDSTNVEEAFLTMARQIKESISQQQQIDD 181
Query: 182 -LSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ + G N+ +S +++GCC
Sbjct: 182 KMGKDDKGGNVNLKGQSLTN---TSSGCC 207
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 133/212 (62%), Gaps = 11/212 (5%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S Q+E+DYLFKL+LIGDSGVGKS LLL F D+F + TIGVDF+ + V + K +K
Sbjct: 3 SMHQKEYDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIK 62
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TS+YYRGA G+++VYD T + +F ++ D W E+D Y+T D K
Sbjct: 63 LQIWDTAGQERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDD-WISEVDRYTT--DSSK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNK D ++R + + +G + E G F+E SAK NVE CF + ++L+ S
Sbjct: 120 ILVGNKCDLVAQRAIEQSQGEKKSSELGIDFIEASAKNSTNVEDCFIRIAKRLLEKKSQS 179
Query: 183 SEGSSGVKKNIFKESPPQNDAST-----TGCC 209
+NI + ND ST + CC
Sbjct: 180 GAVPRIAHQNI--QLCETNDNSTFSSILSTCC 209
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 117/171 (68%), Gaps = 2/171 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFK+++IGDSG GKS+LLL F +T+ E TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++ + W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
NK+D RVV E A + ++E SAKT NVE+ F + + D
Sbjct: 121 NKIDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 126/173 (72%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++++D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKQYDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T SYYRGA GI++VYD+T + +F N+ W + I+ +++ +D K+L
Sbjct: 62 IWDTAGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITK-WLRNIEEHAS-EDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +R+VSK+ G + A ++G FLE SAK ++N+++ F +L IL+
Sbjct: 120 LGNKCDIEEKRMVSKERGEEIAGKHGIRFLETSAKAKINIDKAFYDLAEAILN 172
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
D +R VSK++G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 123 CDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|225719738|gb|ACO15715.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 211
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 130/194 (67%), Gaps = 13/194 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKN-WIRNIEEHASS-DVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D R V+K++G + A EYG F+E SAK+ +NVE+ F L I +
Sbjct: 123 CDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDI----------KAK 172
Query: 189 VKKNIFKESPPQND 202
++K + +PP+ D
Sbjct: 173 MEKRLEASNPPRQD 186
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G A+E+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 93/172 (54%), Positives = 124/172 (72%), Gaps = 6/172 (3%)
Query: 1 MASST--SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG 57
MAS ++ ++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ V L
Sbjct: 1 MASGAGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLD 60
Query: 58 GKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTN 117
GK++KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119
Query: 118 QDCIKLLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
+ K+LVGNK D ES+R VS + G A E+G F E SAKT +NVE+ F
Sbjct: 120 -NVNKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVF 170
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ V + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ N KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSLLS 183
K D R V +A E G FLE SAK +NVE+ F + I + + L
Sbjct: 122 KCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 184 EGSSGVKKNIFKESPPQNDAS-TTGCCSS 211
S V + K P Q + ++ CCS+
Sbjct: 182 RKPSNVVQ--MKGRPIQQEQQKSSRCCST 208
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 108/208 (51%), Positives = 132/208 (63%), Gaps = 14/208 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNMK-TWLQEIDRYGT-AGVVKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS- 186
K D + ++VV + +FA LE SA NVE+ F + +I +T S + S
Sbjct: 122 KNDLKDKKVVDFEVAREFADSLNIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKESG 181
Query: 187 -----SGVKKNIFKESPPQNDASTTGCC 209
SGV N+ +S S GCC
Sbjct: 182 KKDDKSGV--NLKGQSLAN---SGGGCC 204
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/214 (45%), Positives = 135/214 (63%), Gaps = 13/214 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
++ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL
Sbjct: 8 ARSDYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQ 67
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L
Sbjct: 68 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKIL 125
Query: 125 VGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
VGNK D ES+R V +G A EYG F E SAKT +NV++ F + D L+
Sbjct: 126 VGNKADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIA---RDIKQRLA 182
Query: 184 EGSSGVKKNIFKESPPQNDAST------TGCCSS 211
E S + K + P A + + CC S
Sbjct: 183 ETDSKTEPQTLKINQPDQGAGSAQATQKSACCGS 216
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L+GN
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLIGN 129
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R VS +G A EYG F E SAKT +NVEQ F ++ ++ +T S
Sbjct: 130 KADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 189
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ + + K P++ S CC S
Sbjct: 190 EDQTIKINKTGQGSEDPESQKS--ACCGS 216
>gi|357111244|ref|XP_003557424.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 217
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 92/168 (54%), Positives = 123/168 (73%), Gaps = 3/168 (1%)
Query: 2 ASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTI-GVDFKIKHVALGGKK 60
A S S+ ++D+L KLLLIGDSGVGKS LLL F+ DTF T G+DFK++ V L G++
Sbjct: 4 APSRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGRR 63
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 64 VKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 121
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K+LVGNKVD +++RVVS +G A EYG F E SAKT NVEQ F
Sbjct: 122 NKILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVF 169
>gi|206598099|gb|ACI15910.1| Rab1 [Bodo saltans]
Length = 205
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 127/205 (61%), Gaps = 7/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+D+LFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDVESFNNVK-TWLSEIDKYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS- 186
K D +++ V +FA G FLE SAK NVE+ F + I + G+
Sbjct: 122 KSDLIAKKAVDPGMAKEFADSLGIPFLETSAKNSTNVEEAFIRMATDIKSRVAAQGPGAG 181
Query: 187 --SGVKKNIFKESPPQNDASTTGCC 209
GVK E Q GCC
Sbjct: 182 RPGGVKLPASGER-AQQKKKEDGCC 205
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 12/211 (5%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + G+ +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL----DTPSLLSE 184
D +R VSK+EG FA+E+G LFLE SA+T NVE+ F E KIL D +S
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180
Query: 185 GSSGVKKNIFKESPPQNDASTT-----GCCS 210
SSG+K + T GCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCCG 211
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 136/207 (65%), Gaps = 9/207 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCSS 211
++G+K + + P N + +G S+
Sbjct: 181 EANGIK--LGPQHLPSNANTPSGGASA 205
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 12/210 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L+E
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 187 SGVKKNIFKESPPQND-----ASTTGCCSS 211
S + K + P A + CC S
Sbjct: 186 SKPEDKAIKINKPDQGSEAPAAQRSACCGS 215
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 133/199 (66%), Gaps = 9/199 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDA 203
++G+K I + P N A
Sbjct: 181 EANGIK--IGPQHSPSNPA 197
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLAESD 185
Query: 187 SGVKKNIFKESPPQNDAST------TGCCSS 211
S + + + P A + CC S
Sbjct: 186 SKAEPQTIRINQPDQAAGASQSVQKSACCGS 216
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ W + I+ +++N D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIR-TWIRNIEEHASN-DVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D R VSK++G A EYG FLE SAK +NVE+ F L I
Sbjct: 123 CDMNDRRQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDI 169
>gi|18034781|ref|NP_542147.1| GTP-binding protein Rab-3D [Rattus norvegicus]
gi|6093902|sp|Q63942.2|RAB3D_RAT RecName: Full=GTP-binding protein Rab-3D
gi|2253637|gb|AAB81202.1| GTP-binding protein rab3d [Rattus norvegicus]
gi|51859116|gb|AAH81741.1| RAB3D, member RAS oncogene family [Rattus norvegicus]
gi|149020457|gb|EDL78262.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020458|gb|EDL78263.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020459|gb|EDL78264.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|149020461|gb|EDL78266.1| RAB3D, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 219
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 12/211 (5%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+ Q FDY+FKLLLIG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 14 AADQNFDYMFKLLLIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTVYRHDKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G +++YD+ +++FT + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFLLMYDIANQESFTAVQD-WATQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT----- 178
LVGNK D E ERVVS ++G A + G F E SAK +NV+Q FE LV I D
Sbjct: 132 LVGNKCDLEDERVVSAEDGQRLAGDLGFEFFEASAKENINVKQVFERLVDIICDKMNESL 191
Query: 179 -PSLLSEGSSGVKKNIFKESPPQNDASTTGC 208
PS S GS+G + PPQ S+ GC
Sbjct: 192 EPS-SSPGSNGKGPALGDTPPPQ--PSSCGC 219
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 94/162 (58%), Positives = 111/162 (68%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
E+DYLFKLLLIGDS VGKS LLL F D++ + TIGVDFKI+ + L GK +K W
Sbjct: 3 NEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELEGKSVKYRFW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EI+ Y+ + C KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEINRYANDSVC-KLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D RVV + G A E G FLE SAK VNVE+ F
Sbjct: 121 NKCDLVENRVVDTQMGQALADELGIPFLETSAKDAVNVEKAF 162
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 95/161 (59%), Positives = 114/161 (70%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID + T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLQEIDRFGT-AGVLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D ++VV + +FA G F+E SA NVE+ F
Sbjct: 122 KNDLTDKKVVDTEVAKEFADSIGIPFIETSALDSSNVEEAF 162
>gi|385888878|gb|AFI98561.1| RabE1 [Nicotiana benthamiana]
Length = 216
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPP------QNDASTTGCCSS 211
S + + K + P A + CC S
Sbjct: 186 SKAEPSTLKINQPDAGAGGSQAAQKSACCGS 216
>gi|410923995|ref|XP_003975467.1| PREDICTED: ras-related protein Rab-8A-like [Takifugu rubripes]
Length = 222
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 132/212 (62%), Gaps = 14/212 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMK 62
S+ + +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+K
Sbjct: 15 SSMAKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIK 74
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K
Sbjct: 75 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-ADVEK 132
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTP 179
+++GNK D +R VSK G A +YG F+E SAK +NVE F L I +DT
Sbjct: 133 MVLGNKCDINDKRQVSKDRGEQLALDYGIKFMETSAKANINVENAFLTLARDIKSKMDTK 192
Query: 180 ---SLLSEGSSGVKKNIFKESPPQNDASTTGC 208
+ GS GVK S PQ S C
Sbjct: 193 LEGNTQQGGSHGVKI-----SEPQKKTSFFRC 219
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/199 (49%), Positives = 123/199 (61%), Gaps = 5/199 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 60
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNKSDLT 118
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
R + + FA E G F+E SAK NVEQ F + I + + G++
Sbjct: 119 ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPT 178
Query: 193 IFKESPPQNDASTTGCCSS 211
+ P A GCCS+
Sbjct: 179 VQIRGQPV--AQKNGCCST 195
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 138/217 (63%), Gaps = 9/217 (4%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGK 59
MA+ +DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L K
Sbjct: 1 MATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNK 60
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ +
Sbjct: 61 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-N 118
Query: 120 CIKLLVGNKVDKE-SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLK 174
K+LVGNK D + S+R V +G A EYG F E SAKT +NVE F ++ +
Sbjct: 119 VNKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTR 178
Query: 175 ILDTPSLLSEGSSGVKKNI-FKESPPQNDASTTGCCS 210
+ ++ S ++G K ++ K Q ++ CCS
Sbjct: 179 LAESDSKPEAKNAGGKPDVTLKSGGAQPKPASGSCCS 215
>gi|149062038|gb|EDM12461.1| rCG48149, isoform CRA_c [Rattus norvegicus]
Length = 231
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 108/234 (46%), Positives = 135/234 (57%), Gaps = 39/234 (16%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEG------------------------------IDFAREYGCLFLECS 157
K D +++VV +FA G FLE S
Sbjct: 122 KSDLTTKKVVDNTTAKVSRPALAVGSGSHVPSPLLPLLLSLFFPWQEFADSLGVPFLETS 181
Query: 158 AKTRVNVEQCFEELVLKILDTPSLLSEG--SSGVKKNIFKESPPQNDASTTGCC 209
AK NVEQ F + +I + G S G + N+ +S P AS GCC
Sbjct: 182 AKNATNVEQAFMTMAAEI---KKRMGPGAASGGERPNLKIDSTPVKSAS-GGCC 231
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 133/210 (63%), Gaps = 16/210 (7%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GK++KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + I+ ++ N+D K+L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISK-WLRNIEEHA-NEDVEKML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLS 183
+GNK D E RVVSK +G A E+ F E SAK +N+E+ F L IL TP
Sbjct: 120 LGNKCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHKTP---- 175
Query: 184 EGSSGVKKNIFKESPPQNDASTTG---CCS 210
G +N+ N + ++G CCS
Sbjct: 176 -GKEPTNENV----DVNNRSGSSGGVRCCS 200
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 128/205 (62%), Gaps = 18/205 (8%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
FKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V K +KL IWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQE 60
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNKSDLT 118
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R VS + FA E G F+E SAK NVEQ F + I + + S+ ++ +
Sbjct: 119 ANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKN--RMASQPANNAR-- 174
Query: 193 IFKESPPQNDAS------TTGCCSS 211
PP + S ++GCCSS
Sbjct: 175 -----PPTVNISGKPVGQSSGCCSS 194
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 131/204 (64%), Gaps = 8/204 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK + L KK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ W + I+ + + D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIK-TWIRNIE-QNASSDVERMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLLSEG 185
D E +RVVS ++G A EYG F E SAK++++VE+ F + I +D+ + +
Sbjct: 123 CDMEDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVSTPH 182
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
+K+I K S GCC
Sbjct: 183 EH--EKDIIKPDNKPEPKSGGGCC 204
>gi|66816599|ref|XP_642309.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208511|sp|P34140.2|RAB1B_DICDI RecName: Full=Ras-related protein Rab-1B; Flags: Precursor
gi|60470126|gb|EAL68106.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +F N+ W +EI Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQ-WMQEIQRYACDS-VTRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +++V ++A G FLE SAK+ NVEQ F
Sbjct: 122 KCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAF 162
>gi|323337834|gb|EGA79075.1| Ypt1p [Saccharomyces cerevisiae Vin13]
Length = 219
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/193 (51%), Positives = 128/193 (66%), Gaps = 3/193 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +RVV +FA FLE SA NVE F + +I ++ S +
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMSQQKPERN 181
Query: 188 GVKKNIFKESPPQ 200
++ +E P+
Sbjct: 182 HSEEGRQRERQPE 194
>gi|194692552|gb|ACF80360.1| unknown [Zea mays]
gi|414591885|tpg|DAA42456.1| TPA: ras protein ARA-3 [Zea mays]
Length = 218
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 3/166 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTI-GVDFKIKHVALGGKKMK 62
S S+ ++D+L KLLLIGDSGVGKS LLL F+ DTF T G+DFK++ V L GK++K
Sbjct: 6 SRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVK 65
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFDNIRN-WIRNIEQHASD-NVNK 123
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
+LVGNKVD +++RVVS +G A EYG F E SAKT NVEQ F
Sbjct: 124 ILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNRNVEQVF 169
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/191 (49%), Positives = 130/191 (68%), Gaps = 8/191 (4%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S + +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL
Sbjct: 2 SSNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ ++T + K+
Sbjct: 62 QIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFANVEQHAT-EGVNKI 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTP 179
L+GNK D E +R VSK++G A E G FLE SAK +N+E+ F ++ +I+DT
Sbjct: 120 LIGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTS 179
Query: 180 SL-LSEGSSGV 189
S GSSGV
Sbjct: 180 GKEASGGSSGV 190
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 133/209 (63%), Gaps = 11/209 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 25 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 84
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 85 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 142
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V G A EYG F E SAKT +NVEQ F + D L+E
Sbjct: 143 KADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAESD 199
Query: 187 SGVK-KNIFKESPPQNDAST---TGCCSS 211
S + + I P +AS + CC S
Sbjct: 200 SKPEDRTISINRPEGGEASASQKSACCGS 228
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 123/185 (66%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGD GVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G A+E+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/176 (51%), Positives = 122/176 (69%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTP 179
+GNK D + +RVV +G ARE+G F E SAK +N+E+ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTP 175
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 121 NKSDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|388510710|gb|AFK43421.1| unknown [Lotus japonicus]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 132/207 (63%), Gaps = 9/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDASTTG--CCSS 211
S + K + P A+ CC S
Sbjct: 186 SKAEPQTIKINQPDQPAAAQNFTCCGS 212
>gi|307111274|gb|EFN59509.1| hypothetical protein CHLNCDRAFT_33935 [Chlorella variabilis]
Length = 209
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 134/212 (63%), Gaps = 12/212 (5%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+ +Q++DYL KLLLIGDSGVGKS LLL F D+F TIG+DFKIK V + GK +KL
Sbjct: 3 SRRQDYDYLIKLLLIGDSGVGKSCLLLRFAEDSFTSSFITTIGIDFKIKKVLIDGKWVKL 62
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TS+YYRGA GI++VYDVT +FTN+ + W K I+ ++++ +
Sbjct: 63 QIWDTAGQERFRTITSAYYRGAMGILLVYDVTDEASFTNIRN-WMKNIEQHASDN----V 117
Query: 124 LVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFE----ELVLKILDT 178
LVGNK D ES+R V+ G A E+ F E SAK NV++ F+ +++L++ DT
Sbjct: 118 LVGNKSDMDESKRAVAYSRGQALADEFRMQFFETSAKNNTNVDEVFQSVARDIMLRLKDT 177
Query: 179 -PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P S SG + +S GCC
Sbjct: 178 QPDAGSGAGSGPSLRVGAGQRKAVASSKGGCC 209
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 137/214 (64%), Gaps = 18/214 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDASTT---------GCC 209
++G+K I + P N ++ GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSSSQGGHQAGGGCC 212
>gi|348522032|ref|XP_003448530.1| PREDICTED: ras-related protein Rab-8A-like [Oreochromis niloticus]
Length = 206
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/202 (47%), Positives = 130/202 (64%), Gaps = 6/202 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKN-WIRNIEEHAS-ADVEKMVLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS- 187
D +R VSK+ G A EYG F+E SAK+ +NVE F L I EG++
Sbjct: 123 CDINDKRQVSKEMGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKSKMDTKLEGNTP 182
Query: 188 -GVKKNIFKESPPQNDASTTGC 208
G + + K S PQ S C
Sbjct: 183 QGSSQGV-KISEPQKKTSFFRC 203
>gi|89257659|gb|ABD65146.1| Ras-related GTP-binding protein, putative [Brassica oleracea]
Length = 235
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 105/203 (51%), Positives = 126/203 (62%), Gaps = 16/203 (7%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWDTA
Sbjct: 47 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 106
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGA GII+ YDVT +++F N+ W EID Y++ + KLLVGNK
Sbjct: 107 GQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ESVNKLLVGNKN 164
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D S++ FA E G FLE SAK NVE+ F + I + S+ S G
Sbjct: 165 DLTSQKA--------FADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPSGGS 214
Query: 190 KKNIFK-ESPPQNDASTTGCCSS 211
K + P N S GCCSS
Sbjct: 215 KPATVQIRGQPVNQQS--GCCSS 235
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 137/214 (64%), Gaps = 18/214 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDASTT---------GCC 209
++G+K I + P N ++ GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSSNQGGHQAGGGCC 212
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/166 (55%), Positives = 122/166 (73%), Gaps = 3/166 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTI-GVDFKIKHVALGGKKMK 62
S S+ ++D+L KLLLIGDSGVGKS LLL F+ DTF T G+DFK++ V L GK++K
Sbjct: 6 SRSRGDYDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVK 65
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 66 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNK 123
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
+LVGNKVD +++RVVS +G A EYG F E SAKT NVEQ F
Sbjct: 124 ILVGNKVDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVF 169
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R V +G A EYG F E SAKT NVEQ F ++ ++ DT +
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKA 188
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCSS 211
+S + + + P A + CC S
Sbjct: 189 EPATSKIHLDQASGAGPA--AQKSACCGS 215
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 138/212 (65%), Gaps = 9/212 (4%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S +Q++DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKIK + + K +K
Sbjct: 2 SLRRQDYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TS+YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K
Sbjct: 62 LQIWDTAGQERFRTITSAYYRGAMGILLVYDVTDESSFNNIRN-WMRNIEQHASD-NVNK 119
Query: 123 LLVGNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFE----ELVLKILD 177
+LVGNK D ES+R V +G A E+G F E SAK+ + V++ F+ +++L++ D
Sbjct: 120 VLVGNKCDMDESKRRVPYSQGQALADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRD 179
Query: 178 TPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ + SG N+ S + + GCC
Sbjct: 180 SQTDSPSAGSG-SGNVHLSSTTASAKQSKGCC 210
>gi|328779138|ref|XP_003249596.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Apis mellifera]
Length = 192
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RV+ ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDKRVI--------AREHGIRFMETSAKANINIDRAFSELAEAILE 164
>gi|328725761|ref|XP_001950584.2| PREDICTED: ras-related protein Rab-8A-like [Acyrthosiphon pisum]
Length = 225
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 126/199 (63%), Gaps = 12/199 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + + GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIEMDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+ S R VSK+ G A EYG F+E SAK VNVE+ F L I + +S
Sbjct: 123 CELNSGRQVSKERGEQLAVEYGIKFMETSAKASVNVEEAFHTLARDIKTKTEKKLKEAS- 181
Query: 189 VKKNIFKESPPQNDASTTG 207
+PP+ ++G
Sbjct: 182 --------NPPKGGVQSSG 192
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 9/208 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V G A EYG F E SAKT +NVEQ F + I L S
Sbjct: 129 KADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDI--KQRLAESDS 186
Query: 187 SGVKKNIFKESPPQNDAST---TGCCSS 211
+ I P +AS + CC S
Sbjct: 187 KPEDRTISINRPEGGEASASQKSACCGS 214
>gi|145493011|ref|XP_001432502.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831508|emb|CAI39319.1| rab_A65 [Paramecium tetraurelia]
gi|124399614|emb|CAK65105.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 124/184 (67%), Gaps = 9/184 (4%)
Query: 1 MASSTSQQEFDY------LFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKH 53
M S++ QQ+F Y LFK+LLIG+SGVGKS +L+ ++ + F TIGVDFK K
Sbjct: 1 MNSNSDQQDFFYNLLSHFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKT 60
Query: 54 VALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDL 113
+ALG +KL IWDTAGQ+RFRT+T SYYRGAQGII+VYD+T R++F N+ W EID
Sbjct: 61 IALGEHNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVK-TWMAEIDK 119
Query: 114 YSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173
Y++ + +LLVGNK D R VS +EG++ +R Y F E SAK+ +N+E F +
Sbjct: 120 YAS-ESVNRLLVGNKADITERREVSYEEGLELSRLYQIPFYETSAKSSINIEAAFTHITK 178
Query: 174 KILD 177
IL+
Sbjct: 179 NILN 182
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHKMLIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +NVE+ F L + K++DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTNKSEQ 182
Query: 184 EGSSGV 189
GS GV
Sbjct: 183 AGSQGV 188
>gi|358253006|dbj|GAA51290.1| Ras-related protein Rab-18 [Clonorchis sinensis]
Length = 215
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/201 (45%), Positives = 131/201 (65%), Gaps = 7/201 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALG-GKKMKLAIWDTAGQ 71
FKLL+IGDSGVGKS+LLL + +D+FE +S TIGVD+++K + G +KL+IWDTAGQ
Sbjct: 17 FKLLVIGDSGVGKSSLLLRYINDSFEARVSATIGVDYRVKVTTVPDGTMIKLSIWDTAGQ 76
Query: 72 ERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDK 131
ERFRTLT ++YRGA G I+VYDV+ R +F L++ W +E+ +S++ D +++LVGNK+D
Sbjct: 77 ERFRTLTPNFYRGAHGAIIVYDVSNRGSFDRLSN-WMEELKTFSSHHDMVRMLVGNKID- 134
Query: 132 ESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL---SEGSSG 188
R V+++EG+ +AR + + E SAKT V F +LV +I P L S G
Sbjct: 135 HIPRQVTREEGLRYARMFNMPYAETSAKTSEGVNSVFSDLVQRIYTIPHLWDPDSRHRPG 194
Query: 189 VKKNIFKESPPQNDASTTGCC 209
++ + N S GCC
Sbjct: 195 MRHASSRLQLNHNRRSGNGCC 215
>gi|330840493|ref|XP_003292249.1| Rab GTPase [Dictyostelium purpureum]
gi|325077512|gb|EGC31219.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 112/161 (69%), Gaps = 3/161 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +F N+ W +EI Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQ-WMQEIQRYACDS-VTRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D +++V ++A G FLE SAK+ NVEQ F
Sbjct: 122 KCDLIEKKIVDTSTAREYADSVGIPFLETSAKSSANVEQAF 162
>gi|398017462|ref|XP_003861918.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
gi|322500146|emb|CBZ35221.1| small GTP-binding protein Rab1, putative [Leishmania donovani]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++ V + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEVKS 181
Query: 188 GVKKNIFKESPP 199
+ N+ ++PP
Sbjct: 182 ASRPNL--QNPP 191
>gi|238508846|ref|XP_002385605.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
gi|220688497|gb|EED44850.1| Rab GTPase SrgA, putative [Aspergillus flavus NRRL3357]
Length = 495
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 8/207 (3%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAI 65
+ Y+ KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL I
Sbjct: 293 RHALRYVIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQI 352
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+
Sbjct: 353 WDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHKILI 410
Query: 126 GNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI---LDTPSLL 182
GNK D E +R VS ++G A E G FLE SAK +N+E+ F L +I +DT
Sbjct: 411 GNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTSKSE 470
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
GS GV +I ++ P N ++ CC
Sbjct: 471 QPGSQGV--SIDQQGPGPNGSTGGKCC 495
>gi|14318480|ref|NP_116615.1| Ypt1p [Saccharomyces cerevisiae S288c]
gi|1176710|sp|P01123.2|YPT1_YEAST RecName: Full=GTP-binding protein YPT1; AltName: Full=Protein YP2;
AltName: Full=Rab GTPase YPT1; AltName: Full=Transport
GTPase YPT1
gi|55670317|pdb|1UKV|Y Chain Y, Structure Of Rabgdp-Dissociation Inhibitor In Complex With
Prenylated Ypt1 Gtpase
gi|193885330|pdb|3CUE|F Chain F, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885336|pdb|3CUE|L Chain L, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885342|pdb|3CUE|R Chain R, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|193885348|pdb|3CUE|X Chain X, Crystal Structure Of A Trapp Subassembly Activating The
Rab Ypt1p
gi|836716|dbj|BAA09201.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae]
gi|45270824|gb|AAS56793.1| YFL038C [Saccharomyces cerevisiae]
gi|151940725|gb|EDN59112.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190406537|gb|EDV09804.1| GTP-binding protein YPT1 [Saccharomyces cerevisiae RM11-1a]
gi|207345743|gb|EDZ72464.1| YFL038Cp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|256268891|gb|EEU04240.1| Ypt1p [Saccharomyces cerevisiae JAY291]
gi|259146151|emb|CAY79410.1| Ypt1p [Saccharomyces cerevisiae EC1118]
gi|285811857|tpg|DAA12402.1| TPA: Ypt1p [Saccharomyces cerevisiae S288c]
gi|323305139|gb|EGA58888.1| Ypt1p [Saccharomyces cerevisiae FostersB]
gi|323309292|gb|EGA62512.1| Ypt1p [Saccharomyces cerevisiae FostersO]
gi|323333703|gb|EGA75095.1| Ypt1p [Saccharomyces cerevisiae AWRI796]
gi|323348826|gb|EGA83065.1| Ypt1p [Saccharomyces cerevisiae Lalvin QA23]
gi|323355229|gb|EGA87055.1| Ypt1p [Saccharomyces cerevisiae VL3]
gi|349577879|dbj|GAA23046.1| K7_Ypt1p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365760958|gb|EHN02639.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|365765905|gb|EHN07409.1| Ypt1p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|392299633|gb|EIW10726.1| Ypt1p [Saccharomyces cerevisiae CEN.PK113-7D]
gi|401625946|gb|EJS43923.1| ypt1p [Saccharomyces arboricola H-6]
gi|401840682|gb|EJT43405.1| YPT1-like protein [Saccharomyces kudriavzevii IFO 1802]
gi|1589358|prf||2210408C GTP-binding protein
Length = 206
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
K D + +RVV +FA FLE SA NVE F + +I ++ S
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 121/176 (68%), Gaps = 4/176 (2%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLGNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTP 179
+GNK D + +RVV K +G ARE+G F E SAK N+E+ F L IL TP
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTP 175
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 135/203 (66%), Gaps = 13/203 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDASTTG 207
++G+K PQ+ A++T
Sbjct: 181 EANGIKIG------PQHAATSTA 197
>gi|339898641|ref|XP_003392649.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
gi|321398437|emb|CBZ08825.1| putative small GTP-binding protein Rab1 [Leishmania infantum JPCM5]
Length = 200
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/192 (50%), Positives = 127/192 (66%), Gaps = 5/192 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ + L K +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD T ++F N+ W EI+ Y++ ++ K+LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++ V + DFA G FLE SAK NVE+ F ++ I ++ E S
Sbjct: 122 KCDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEVKS 181
Query: 188 GVKKNIFKESPP 199
+ N+ ++PP
Sbjct: 182 ASRPNL--QNPP 191
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 140/215 (65%), Gaps = 19/215 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D +S R V K+EG FARE+G +F+E SA+T NVE+ F +E+ KI + ++
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDA----------STTGCC 209
++G+K I ++ P N + S++GCC
Sbjct: 181 EANGIK--IGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 8/210 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVAL-GGKKMKL 63
S +FDYLFKLLLIGDSGVGKS LLL F +F + TIGVDFKIK + GK +KL
Sbjct: 2 STTDFDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQERFRT+TSSYYRGA GII+V+DVT ++F N+ W EI+ Y++ C KL
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTS-WISEIENYASESVC-KL 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNK D +RVV++++ + A+ G ++E SAKT +VE+ F + +I + L+
Sbjct: 120 LVGNKTDLTEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEAFVMMTKEIRNRTGNLA 179
Query: 184 ----EGSSGVKKNIFKESPPQNDASTTGCC 209
G+ + + + + + + GCC
Sbjct: 180 LAKGSGAGTSRSGVDVRAETEQVSQSGGCC 209
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 128/203 (63%), Gaps = 11/203 (5%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMK 62
S + +D+LFKLLLIGDSGVGK+ L++ F D F TIG+DFKI+ V + GKK+K
Sbjct: 1 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 60
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L +WDTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +
Sbjct: 61 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 118
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LL+GNK D E++R V K++ ARE+G F E SAK+ +NV++ F L I LL
Sbjct: 119 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LL 173
Query: 183 SEGSSGVKKNIFKESPPQNDAST 205
G +K N PP D T
Sbjct: 174 KSGGRRLKNN---NKPPSTDLKT 193
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---KDIKQRLAETD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P A+ + CC S
Sbjct: 186 SKAEPQTIKINQPDQAANGGQAPQKSACCGS 216
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 136/213 (63%), Gaps = 13/213 (6%)
Query: 1 MAS-STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGG 58
MAS TS+Q++D KLLL+GDSGVGKS LLL F D+F TIG+DFKI+ V + G
Sbjct: 1 MASRGTSRQQYDLTMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEING 60
Query: 59 KKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQ 118
KK+KL IWDTAGQERFRT+T++YYRGA GII+VYDVT +F ++ + W + ++ ++ N+
Sbjct: 61 KKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHN-WYQTLNQHA-NE 118
Query: 119 DCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT 178
D LVGNK D E R V+K++G A E G FLE SAK+ NV+ F EL + +
Sbjct: 119 DAQLFLVGNKCDDEESRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEK 178
Query: 179 --PSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
+ GS+G+ N ND ++ CC
Sbjct: 179 MRNTQQGPGSAGIDVN------SSNDTKSS-CC 204
>gi|291190144|ref|NP_001167084.1| ras-related protein Rab-8A [Salmo salar]
gi|223648024|gb|ACN10770.1| Ras-related protein Rab-8A [Salmo salar]
Length = 206
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 127/203 (62%), Gaps = 6/203 (2%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L KK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDNKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKN-WIRNIEEHAS-ADVEKMVLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS- 187
D +R VSK G A EYG F+E SAK +NVE F L I EGSS
Sbjct: 123 CDINDKRQVSKDRGEKLALEYGIKFMETSAKANINVENSFLTLARDIKSKMDTKLEGSSP 182
Query: 188 -GVKKNIFKESPPQNDASTTGCC 209
G + K S PQ +S C
Sbjct: 183 QGSSHKV-KISQPQKKSSFFRCA 204
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIM 170
>gi|46326983|gb|AAS88430.1| ethylene-responsive small GTP-binding protein [Oryza sativa
Japonica Group]
Length = 214
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 118/162 (72%), Gaps = 4/162 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
K D ES+R V +G FA EYG F E SAKT +NVEQ F
Sbjct: 129 KADMDESKRAVPPSKGQAFADEYGIKFFETSAKTNLNVEQVF 170
>gi|406606883|emb|CCH41737.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 205
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 105/206 (50%), Positives = 130/206 (63%), Gaps = 9/206 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ + TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTADYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y+T +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSLLS 183
K D ++ V +FA FLE SA NVEQ F + +I S +
Sbjct: 122 KSDLTDKKSVDYNVAKEFADALDIPFLETSALNSTNVEQAFFTMARQIKANVSSNASNAN 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
G++ NI +S QN + GCC
Sbjct: 182 AGNNKNSVNIRGQSIGQNQQN--GCC 205
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
D +R VSK++G A EYG F+E SAK +NVE F L I EG+S
Sbjct: 123 CDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNS 181
>gi|383848305|ref|XP_003699792.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Megachile
rotundata]
Length = 192
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 119/173 (68%), Gaps = 11/173 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E RV+ ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDRRVI--------AREHGIRFMETSAKANINIDRAFSELAEAILE 164
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHKMLIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +NVE+ F L + K++DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTTKSEQ 182
Query: 184 EGSSGV 189
GS GV
Sbjct: 183 AGSQGV 188
>gi|6624302|dbj|BAA88497.1| small GTP-binding protein [Carica papaya]
Length = 211
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 132/213 (61%), Gaps = 18/213 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + VA+ G+ +KL I DT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPIKLQIRDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL----LSE 184
D R VSK+EG FA+E+G LFLE SA+T NVE+ F KIL +S
Sbjct: 121 SDLSHRRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIRTAAKILQNIQEGVIDVSN 180
Query: 185 GSSGVKKNIFKESPPQNDAST--------TGCC 209
SSG+K F PQ A +GCC
Sbjct: 181 ESSGIK---FGYGRPQGTAGARDGAVAQRSGCC 210
>gi|395323826|gb|EJF56281.1| GTP-binding protein ypt1 [Dichomitus squalens LYAD-421 SS1]
Length = 206
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 125/203 (61%), Gaps = 4/203 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGKS LLL F D F + TIGVDFKI+ + L G+ +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGRTVKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+ ++YYRGA GIIMVYDVT +TF+N+ W +EI+ Y++ + KL++GNK
Sbjct: 65 AGQERFRTIAAAYYRGAHGIIMVYDVTDGETFSNVKG-WMQEIERYAS-EGVKKLIIGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGSS 187
D ++VV DFA F+E SAK NVE+ F L I D S E S+
Sbjct: 123 SDLVEKKVVEYSLAKDFADTVSIPFIETSAKNSTNVEEAFSLLAKTIKDEVDSQPEEASN 182
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
G K + N G CS
Sbjct: 183 GTKTSSVTPGRSLNGDEDAGACS 205
>gi|57008|emb|CAA30005.1| unnamed protein product [Rattus norvegicus]
Length = 220
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/208 (43%), Positives = 129/208 (62%), Gaps = 10/208 (4%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-L 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-------L 176
LVGNK D E ERVVS + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 177 DTPSLLSEGSSGVKKNIFKESPPQNDAS 204
DT L G+ + +++PP D +
Sbjct: 192 DTADLAVTGAKQGPQLTDQQAPPHQDCA 219
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 11/209 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++D+L KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ V L GK++KL IWD
Sbjct: 11 DYDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D LSE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLSESD 185
Query: 187 SGVK-KNIFKESPPQNDAST---TGCCSS 211
S + + I P +AS + CC S
Sbjct: 186 SKPEDRTISINRPDGGEASASQKSACCGS 214
>gi|224496098|ref|NP_001139069.1| RAB3D, member RAS oncogene family, a [Danio rerio]
Length = 223
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/212 (43%), Positives = 135/212 (63%), Gaps = 15/212 (7%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
+ Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 18 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVYRNEKRVKLQ 77
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQER+RT+T++YYRGA G +++YD+T +D+F + D WA +I YS + + +L
Sbjct: 78 IWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFYAVQD-WATQIKTYSWDNAQV-IL 135
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-------LD 177
VGNK D E +R+V++++G A E G F E SAK +NV+Q FE LV I LD
Sbjct: 136 VGNKCDLEDDRLVAREDGQRLANELGFQFFEASAKDNINVKQVFERLVDIICDKMNESLD 195
Query: 178 T-PSLLSEGSSGVKKNIFKESPPQNDASTTGC 208
T PS+L+ K +++PP + GC
Sbjct: 196 TDPSILTNQ----KGPSLQDTPPDGQSGGCGC 223
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 136/214 (63%), Gaps = 18/214 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDA---------STTGCC 209
++G+K I + P N + GCC
Sbjct: 181 EANGIK--IGPQHPTTNSTLSGSQGGQHAGGGCC 212
>gi|125858678|gb|AAI29779.1| LOC100037230 protein [Xenopus laevis]
Length = 205
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/179 (49%), Positives = 122/179 (68%), Gaps = 3/179 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GK++KL IWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++GNK
Sbjct: 63 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVEKMVLGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
D +R VSK++G A EYG F+E SAK +NVE F L I EG+S
Sbjct: 121 CDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDIKAKMDKRMEGNS 179
>gi|225711854|gb|ACO11773.1| Ras-related protein Rab-8A [Lepeophtheirus salmonis]
Length = 212
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/195 (47%), Positives = 127/195 (65%), Gaps = 14/195 (7%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNDKSFDNIKN-WIRNIEEHAS-ADVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGSS 187
D R V+K++G D A EYG F+E SAK+ +NVE+ F L I L E S
Sbjct: 123 CDINDRRKVTKEKGEDLAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQEAS- 181
Query: 188 GVKKNIFKESPPQND 202
+PP+ D
Sbjct: 182 ---------NPPRQD 187
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 128/195 (65%), Gaps = 14/195 (7%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKN-WIRNIEEHASS-DVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGSS 187
D R V+K++G + A EYG F+E SAK+ +NVE+ F L I L E S
Sbjct: 123 CDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQEAS- 181
Query: 188 GVKKNIFKESPPQND 202
+PP+ D
Sbjct: 182 ---------NPPRQD 187
>gi|115464323|ref|NP_001055761.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|47900325|gb|AAT39172.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579312|dbj|BAF17675.1| Os05g0461300 [Oryza sativa Japonica Group]
gi|215767251|dbj|BAG99479.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767268|dbj|BAG99496.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767288|dbj|BAG99516.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218196931|gb|EEC79358.1| hypothetical protein OsI_20237 [Oryza sativa Indica Group]
gi|222631859|gb|EEE63991.1| hypothetical protein OsJ_18820 [Oryza sativa Japonica Group]
Length = 216
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L+E
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLAETD 185
Query: 187 SGVKKNIFK------ESPPQNDASTTGCCSS 211
S + K + + AS + CC S
Sbjct: 186 SKPEDKTIKINNKTDQGADKPAASGSACCGS 216
>gi|351724389|ref|NP_001236800.1| uncharacterized protein LOC100499844 [Glycine max]
gi|255627067|gb|ACU13878.1| unknown [Glycine max]
Length = 216
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P AS + CC S
Sbjct: 186 SRAEPQTIKINQPDQAASGGRPAQKSACCGS 216
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 123/174 (70%), Gaps = 3/174 (1%)
Query: 3 SSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKM 61
S +Q+ +DYLFKLLLIGDSGVGK+ LL F ++F TIG+DFKI+ V + GK++
Sbjct: 12 SIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFKIQTVEIDGKRI 71
Query: 62 KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCI 121
KL +WDTAGQERFRT+T++YYRGA GI++VYDVT + TF N+ + W K I+ ++ +
Sbjct: 72 KLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITN-WLKNIEEHAA-EGVE 129
Query: 122 KLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
+LLV NK D+E +RV+S+++G A +G F+ECSA T NV + F + ++
Sbjct: 130 QLLVANKCDQEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVREAFYRMARRV 183
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D E+ R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI D ++
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 185 GSSGVK 190
++G+K
Sbjct: 181 EANGIK 186
>gi|145545648|ref|XP_001458508.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834260|emb|CAI44498.1| rab_C41 [Paramecium tetraurelia]
gi|124426328|emb|CAK91111.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 121/174 (69%), Gaps = 3/174 (1%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S ++ +LFK+LLIG+SGVGKS +L+ ++ + F TIGVDFK K VA+G +KL
Sbjct: 2 SSNSDYQFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKTVAIGENNVKL 61
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQ+RFRT+T SYYRGAQGII+VYD+T R++F N+ W EID Y++ + ++
Sbjct: 62 QIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVK-TWIAEIDKYAS-ESVNRM 119
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
LVGNK D R VS +EG++ +R+Y F E SAK+ +N+E F + IL+
Sbjct: 120 LVGNKADITERREVSYEEGLELSRQYQFPFYETSAKSSINIEAAFTHITKNILN 173
>gi|256084393|ref|XP_002578414.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
Length = 355
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYL KLLLIGDSGVGKS LLL F +TF E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 162 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTA 221
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGAQGII+VYD+T + TF N+ W EI Y+ N +LLVGNK
Sbjct: 222 GQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQS-WLHEISCYA-NSTVSRLLVGNKC 279
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D + R V +FA + F+E SAK NVE F ++ KI E ++ V
Sbjct: 280 DLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEKI-------QENATPV 332
Query: 190 KKNIFKESPPQNDASTT----GCC 209
+N+ + P N GCC
Sbjct: 333 -QNMLSSTVPVNSTQPVKKSGGCC 355
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 134/212 (63%), Gaps = 14/212 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMK 62
S ++ FD KLL+IGDSGVGK+ LLL + +D+F + TIG+DFKIK++ L K++K
Sbjct: 2 SRNESPFDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T+SY+RGAQGI++VYDVT + +F ++ + W +I ++ + K
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRN-WVAQIQQHA-DVAVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-----LD 177
+L+GNK D + +R VS++EG A EYG F E SAK +NVE+ F + ++ D
Sbjct: 120 ILIGNKCDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKDRLMAD 179
Query: 178 TPSLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
P+ S + V N Q TGCC
Sbjct: 180 GPNPGSRAAGNVNLN------AQASKKKTGCC 205
>gi|395510325|ref|XP_003759428.1| PREDICTED: ras-related protein Rab-3C [Sarcophilus harrisii]
Length = 227
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 133/209 (63%), Gaps = 8/209 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
TS Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 22 TSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 81
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +
Sbjct: 82 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-I 139
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD--TPSL 181
LVGNK D E ERV+S + G + G F E SAK +NV+Q FE LV I D + SL
Sbjct: 140 LVGNKCDMEDERVISTERGKHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 199
Query: 182 LSEG--SSGVKKNIFKESPPQNDASTTGC 208
++ ++G + KESPP + GC
Sbjct: 200 ETDPAIAAGKQNTRLKESPPPQQPN-CGC 227
>gi|74833846|emb|CAI39376.1| rab_A02 [Paramecium tetraurelia]
Length = 201
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 133/203 (65%), Gaps = 5/203 (2%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFKL+++G+SGVGKS+LLL F+ DTF + TIGVDF+ K + + GKK+KL IW
Sbjct: 3 KEYDYLFKLVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGVDFRFKTLEIDGKKVKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YY+GA GI++VYDV+ TF ++ W E+D Y+ ++ LL+G
Sbjct: 63 DTAGQERFRTITSAYYKGADGIVLVYDVSSLATFEDIDKFWINEVDSYA-EKNVELLLLG 121
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D E E+VV+ ++ +D+A +E SAKT V + F L K++ S+GS
Sbjct: 122 NKSDIE-EKVVTTQKALDYAGIRKMAHMEVSAKTADQVSKAFLSLARKLIAKKD--SQGS 178
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
G +++P Q GCC
Sbjct: 179 KGSGPQKTQQTPGQKIGQQKGCC 201
>gi|145248582|ref|XP_001400630.1| GTP-binding protein ypt2 [Aspergillus niger CBS 513.88]
gi|11558647|emb|CAC17832.1| secretion related GTPase, (SrgA) [Aspergillus niger]
gi|134081297|emb|CAK41800.1| secretion related GTPase srgA-Aspergillus niger
gi|350639164|gb|EHA27518.1| hypothetical protein ASPNIDRAFT_210814 [Aspergillus niger ATCC
1015]
Length = 206
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 134/206 (65%), Gaps = 8/206 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHKILIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +N+E+ F +L + K +DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
GS GV +I ++ N ++ CC
Sbjct: 183 VGSQGV--SIDQQGSGLNGSAGGKCC 206
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 129/210 (61%), Gaps = 12/210 (5%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + + +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +LVGNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLVGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL----LSE 184
D R VSK+EG FA+E G LFLE SA+T NVE+ F + KIL +S
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
Query: 185 GSSGVKKNIFKESPPQND-----ASTTGCC 209
SSG+K + P A GCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 119/167 (71%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T + +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRN-WIRNIEEHAS-ADVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D + R VSK++G A EYG F+E SAK +NVE+ F L I
Sbjct: 123 CDMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFVTLARDI 169
>gi|353230109|emb|CCD76280.1| putative rab15, 13, 10, 1, 35, 5, and [Schistosoma mansoni]
Length = 218
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 124/204 (60%), Gaps = 15/204 (7%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWDTA 69
DYL KLLLIGDSGVGKS LLL F +TF E TIGVDFKI+ + L GK +KL IWDTA
Sbjct: 25 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTA 84
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRT+TSSYYRGAQGII+VYD+T + TF N+ W EI Y+ N +LLVGNK
Sbjct: 85 GQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQS-WLHEISCYA-NSTVSRLLVGNKC 142
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D + R V +FA + F+E SAK NVE F ++ KI E ++ V
Sbjct: 143 DLANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEKI-------QENATPV 195
Query: 190 KKNIFKESPPQNDASTT----GCC 209
+N+ + P N GCC
Sbjct: 196 -QNMLSSTVPVNSTQPVKKSGGCC 218
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-ADVEKMVLG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLARDIM 170
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIM 170
>gi|4293|emb|CAA25036.1| unnamed protein product [Saccharomyces cerevisiae]
gi|223830|prf||1001201A protein YP2
Length = 206
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D + +RVV +FA FLE SA NVE F + +I
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 169
>gi|388582980|gb|EIM23283.1| hypothetical protein WALSEDRAFT_15609 [Wallemia sebi CBS 633.66]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 120/176 (68%), Gaps = 16/176 (9%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTF---EELSPTIGVDFKIKHVALGGKKMKLAIW---- 66
FKLLLIG+S VGKS+LLL FT + F E+ + TIGVDFK+K++ + K+ KL+IW
Sbjct: 20 FKLLLIGNSSVGKSSLLLRFTENDFLPEEDANATIGVDFKVKYIQIKDKRYKLSIWCVFA 79
Query: 67 -------DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
+TAGQERFR+L SSYYRGAQG+I+VYDVT R+TF L +W +E+D YST+ D
Sbjct: 80 THTHANFNTAGQERFRSLVSSYYRGAQGVILVYDVTNRETFDKLR-VWFQELDTYSTD-D 137
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
+K++VGNK D +R VS +E + A + +F+ECSAKT V F EL K+
Sbjct: 138 AVKIVVGNKTDVNHQRAVSIEEAKELAELHNAMFVECSAKTSTGVNHLFYELAQKV 193
>gi|340720309|ref|XP_003398583.1| PREDICTED: ras-related protein Rab-10-like isoform 2 [Bombus
terrestris]
Length = 192
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 120/173 (69%), Gaps = 11/173 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T TF N+ W + ID ++ N+D K++
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMI 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
+GNK D E +RV+ ARE+G F+E SAK +N+++ F EL IL+
Sbjct: 120 LGNKSDMEDKRVI--------AREHGIRFMETSAKADINIDRAFNELTEAILE 164
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKN-WIRNIEQHASD-NVNKILVGN 129
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R V +G A EYG F E SAKT +NVE+ F ++ K+ DT S
Sbjct: 130 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRA 189
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ ++ N S A+ CC S
Sbjct: 190 EPQT--IQINQPDASASGGQAAQKSCCGS 216
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 127/201 (63%), Gaps = 10/201 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D KLL+IGDS VGK++LLL + +DTF TIG+DFKIK + L GK++KL IWDT
Sbjct: 7 YDLQIKLLMIGDSAVGKTSLLLRYANDTFSSTFITTIGIDFKIKTINLDGKRVKLQIWDT 66
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE+FRT+T SY+RGAQGI++VYD+T R TF ++ W +I+ ++ Q K+LVGNK
Sbjct: 67 AGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRS-WMAQINEHADGQ-VNKILVGNK 124
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
D S R VS EG A EYG F+E SAK VNV + F + ++ T + S + G
Sbjct: 125 CDNSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFRAIAQQV--TSRIPSRAAGG 182
Query: 189 VKKNIFKESPPQNDASTTGCC 209
VK + + P GCC
Sbjct: 183 VK--LQSAAKP---GGKKGCC 198
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 129/207 (62%), Gaps = 13/207 (6%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ ++T + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAT-EGVNKILIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELV----LKILDTPSLL 182
NK D E RVVS + G A E G FLE SAK+ +NVE+ F L +I+DT
Sbjct: 123 NKCDWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDTAKTD 182
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ S GV + Q S CC
Sbjct: 183 ASASQGV------DVGAQGSGSGGKCC 203
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 135/212 (63%), Gaps = 16/212 (7%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 12 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 71
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 72 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIKN-WIRNIEQHASD-NVNKILVGN 129
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 130 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 186
Query: 187 SGVKKNIFKESPPQNDASTTG-------CCSS 211
S + + + P DAS +G CC S
Sbjct: 187 SRAEPQTIQINQP--DASASGGQAAQKSCCGS 216
>gi|410905863|ref|XP_003966411.1| PREDICTED: ras-related protein Rab-3D-like [Takifugu rubripes]
Length = 222
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 132/206 (64%), Gaps = 3/206 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
+ Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 18 ADQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFRNDKRIKLQ 77
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQER+RT+T++YYRGA G +++YD+T +D+F + D WA +I YS + + +L
Sbjct: 78 IWDTAGQERYRTITTAYYRGAMGFLLMYDITNQDSFKAVQD-WATQIKTYSWDNAQV-IL 135
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
VGNK D E +R+V ++G A E G F E SAK +NV+Q FE LV I D S E
Sbjct: 136 VGNKCDLEDDRLVPTEDGQRLAEELGFQFFEASAKDNINVKQVFERLVDIICDKMSESME 195
Query: 185 GSSGVKKNIFKESPPQNDASTTGCCS 210
G + + K+S + + ++G C+
Sbjct: 196 GDNNFLSSQGKQSLKDSPSESSGGCA 221
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 134/213 (62%), Gaps = 13/213 (6%)
Query: 7 QQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAI 65
+ ++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + + GK++KL I
Sbjct: 9 RADYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQI 68
Query: 66 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLV 125
WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LV
Sbjct: 69 WDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILV 126
Query: 126 GNKVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
GNK D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 127 GNKADMDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIA---KDIKQRLAE 183
Query: 185 GSSGVKKNIFKESPPQNDAST------TGCCSS 211
S + K + + A T + CC S
Sbjct: 184 TDSKTEPQTIKINQQEQGAGTSAASQKSACCGS 216
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPS 180
K D ES+R V K +G A EYG F E SAKT +NVE+ F +++ ++ DT S
Sbjct: 129 KADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDS 186
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVK 190
++G+K
Sbjct: 181 EANGIK 186
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/168 (51%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 123 CDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIM 170
>gi|449440016|ref|XP_004137781.1| PREDICTED: ras-related protein RABE1a-like [Cucumis sativus]
Length = 216
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D LS+
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---KDIKQRLSDSD 185
Query: 187 SGVKKNIFKESPPQNDAST------TGCCSS 211
S + K + N A + CC S
Sbjct: 186 SKSEPQTIKINQADNGAGASQTAQKSACCGS 216
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P A+ + CC S
Sbjct: 186 SKAEPQTIKINQPDQTATGGLAAQKSACCGS 216
>gi|291395402|ref|XP_002714096.1| PREDICTED: RAB3C, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 219
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 8/209 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 14 SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNK D E ERV+S + G + G F E SAK +NV+Q FE LV I D S
Sbjct: 132 LVGNKCDMEDERVISTERGQRLGEQLGFEFFEASAKDNINVKQTFERLVDIICDKMSESL 191
Query: 184 EGSSGV---KKNI-FKESPPQNDASTTGC 208
E V K+N KE+PP ST GC
Sbjct: 192 ETDPAVTAAKQNTRLKETPPP-PQSTCGC 219
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 126/178 (70%), Gaps = 8/178 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPS 180
K D ES+R V K +G A EYG F E SAKT +NVE+ F +++ ++ DT S
Sbjct: 129 KADMDESKRAVPKSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDS 186
>gi|295671891|ref|XP_002796492.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283472|gb|EEH39038.1| GTP-binding protein SAS1 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 206
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHKMLIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +NVE+ F L + +++DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTKSEQ 182
Query: 184 EGSSGV 189
GS GV
Sbjct: 183 AGSQGV 188
>gi|225681353|gb|EEH19637.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb03]
gi|226288481|gb|EEH43993.1| GTP-binding protein SAS1 [Paracoccidioides brasiliensis Pb18]
Length = 206
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/186 (48%), Positives = 125/186 (67%), Gaps = 6/186 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHKMLIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +NVE+ F L + +++DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKRVMDTTKSEQ 182
Query: 184 EGSSGV 189
GS GV
Sbjct: 183 AGSQGV 188
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 135/206 (65%), Gaps = 7/206 (3%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ LL+ + ++ TIG+DFKIK + L GKK+KL
Sbjct: 2 AKKSYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA G +M+YD+T R TF N+ W K I Y++ +D KL+
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGRMMIYDITNRRTFDNI-QTWMKNICDYAS-EDVEKLV 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL-DTPSLLS 183
VGNK D ++ R VS +EG + AR + FLE SA T NV + FEEL L IL TP+
Sbjct: 120 VGNKCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRGH 179
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
E S+ + + + P N S + CC
Sbjct: 180 EPSTVTQSHRLVD--PLNSKSES-CC 202
>gi|131848|sp|P22128.1|RAB8_DISOM RecName: Full=Ras-related protein Rab-8; AltName: Full=ORA2; Flags:
Precursor
gi|213119|gb|AAA49232.1| GTP-binding protein [Discopyge ommata]
Length = 210
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ V L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTVELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI+ VYD+T +F N+ + W + I+ ++++ D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMKVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
D +R VSK+ G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 123 CDMNEKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFITLARDIM 170
>gi|145495635|ref|XP_001433810.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831504|emb|CAI39318.1| rab_B65 [Paramecium tetraurelia]
gi|124400930|emb|CAK66413.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 123/184 (66%), Gaps = 9/184 (4%)
Query: 1 MASSTSQQEFDY------LFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKH 53
M S++ QQ+F Y LFK+LLIG+SGVGKS +L+ ++ + F TIGVDFK K
Sbjct: 1 MNSNSDQQDFFYNLRSHFLFKVLLIGNSGVGKSCMLMRYSENQFTNNFYNTIGVDFKTKT 60
Query: 54 VALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDL 113
+ALG +KL IWDTAGQ+RFRT+T SYYRGAQGII+VYD+T R++F N+ W EID
Sbjct: 61 IALGEHNVKLQIWDTAGQDRFRTITCSYYRGAQGIIIVYDITDRESFENVK-TWMAEIDK 119
Query: 114 YSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL 173
Y++ + +LLVGNK D R VS +EG++ +R Y F E SAK+ N+E F +
Sbjct: 120 YAS-ESVNRLLVGNKADITERREVSYEEGLELSRLYQIPFYETSAKSSTNIEAAFTHITK 178
Query: 174 KILD 177
IL+
Sbjct: 179 NILN 182
>gi|126315213|ref|XP_001366023.1| PREDICTED: ras-related protein Rab-3C-like [Monodelphis domestica]
Length = 219
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 130/209 (62%), Gaps = 8/209 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
TS Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 14 TSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
LVGNK D E ERV+S + G + G F E SAK +NV+Q FE LV I D S
Sbjct: 132 LVGNKCDMEDERVISTERGKHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 184 EG----SSGVKKNIFKESPPQNDASTTGC 208
E ++G + KESPP + GC
Sbjct: 192 ETDPAIAAGKQNTRLKESPPPQQPN-CGC 219
>gi|32401324|gb|AAP80834.1| GTP-binding protein [Griffithsia japonica]
Length = 154
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 112/153 (73%), Gaps = 3/153 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYL+K LLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLYKNLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID +++ C KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKS-WLQEIDRFASEHVC-KLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKT 160
K D S++VV + +FA G FLE SAKT
Sbjct: 122 KNDMTSKKVVDTETAKNFADSLGIKFLETSAKT 154
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 132/197 (67%), Gaps = 9/197 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D ES R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI + ++
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQN 201
++G+K I + P N
Sbjct: 181 EANGIK--IGPQHSPTN 195
>gi|388504478|gb|AFK40305.1| unknown [Lotus japonicus]
Length = 215
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 134/207 (64%), Gaps = 9/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIHNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R V +G A EYG F E SAKT +NV + F ++ ++ DT S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVGEVFFSIARDIKQRLADTDSSK 188
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+E +G+K N + A + CC
Sbjct: 189 TE-PTGIKINPQDKGSAGEAAQKSACC 214
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIM 170
>gi|224109576|ref|XP_002315241.1| predicted protein [Populus trichocarpa]
gi|118482120|gb|ABK92991.1| unknown [Populus trichocarpa]
gi|222864281|gb|EEF01412.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L G+++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGRRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D +SE
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRISETD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + + + P A+ + CC S
Sbjct: 186 SRAEPQTIRINQPDQAANGGQAAQKSACCGS 216
>gi|431918473|gb|ELK17694.1| Ras-related protein Rab-3C [Pteropus alecto]
Length = 219
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 132/200 (66%), Gaps = 7/200 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S Q FDY+FKLL+IG+S VGK++ L + D+F T+G+DFK+K V K++KL
Sbjct: 14 SSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDSFTSAFVSTVGIDFKVKTVFKNEKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD--TPSL 181
LVGNK D E ERV+S + G + G F E SAK +NV+Q FE LV I D + SL
Sbjct: 132 LVGNKCDMEDERVISTERGQHLGEQLGFEFFETSAKDNINVKQTFERLVDIICDKMSESL 191
Query: 182 LSEGS-SGVKKNI-FKESPP 199
++ + + K+N FKE+PP
Sbjct: 192 ETDPAITAAKQNTRFKETPP 211
>gi|388521973|gb|AFK49048.1| unknown [Lotus japonicus]
Length = 212
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 133/207 (64%), Gaps = 9/207 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L G+++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGERIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDAS--TTGCCSS 211
S + K + P A+ + CC S
Sbjct: 186 SKAEPQTIKINQPDQPAAAQNSTCCGS 212
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 12/211 (5%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + G+ +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL----DTPSLLSE 184
D +R VSK+EG FA+E+G LFLE SA+T NVE+ F + KIL D +S
Sbjct: 121 CDLAHKRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
Query: 185 GSSGVKKNIFKESPPQNDASTT-----GCCS 210
SSG+K + T GCC
Sbjct: 181 ESSGIKVGYGRTQGAAGGRDGTISQGGGCCG 211
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 129/211 (61%), Gaps = 12/211 (5%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + + +KL IWDT
Sbjct: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +LA W ++ ++ N + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL----LSE 184
D R VSK+EG FA+E G LFLE SA+T NVE+ F KIL +S
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSN 180
Query: 185 GSSGVKKNIFKESPPQND-----ASTTGCCS 210
SSG+K + P A GCCS
Sbjct: 181 ESSGIKVGYGRPQGPSGSRDGAVAQRGGCCS 211
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VS+++G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/199 (46%), Positives = 127/199 (63%), Gaps = 11/199 (5%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+LFKLLLIGDSGVGK+ L++ F D F TIG+DFKI+ V + GKK+KL +W
Sbjct: 3 KAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERF+T+T++YYRGA GII+VYD+T +F N+ + W K I + + +LL+G
Sbjct: 63 DTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLLG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D E++R V K++ ARE+G F E SAK+ +NV++ F L I LL G
Sbjct: 121 NKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LLKSGG 175
Query: 187 SGVKKNIFKESPPQNDAST 205
+K N PP D T
Sbjct: 176 RRLKNN---NKPPSTDLKT 191
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDAS------TTGCCSS 211
S + K + P A+ + CC S
Sbjct: 186 SKAEPQTIKINQPDQAATGGLAAQKSACCGS 216
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/187 (49%), Positives = 125/187 (66%), Gaps = 7/187 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +FTN+ W ++ ++T + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFSNVEQHAT-EGVNKILIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL----KILDTPSLL 182
NK D E +RVVS + G A E G FLE SAK+ +NVE+ F L +I+DT +
Sbjct: 123 NKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADIKKRIVDTSKID 182
Query: 183 SEGSSGV 189
GV
Sbjct: 183 QAAQQGV 189
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|221042724|dbj|BAH13039.1| unnamed protein product [Homo sapiens]
Length = 184
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/168 (55%), Positives = 114/168 (67%), Gaps = 23/168 (13%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQER 73
K+L+IG+SGVGKS+LLL FT DTF+ +LAIWDTAGQER
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDP---------------------ELAIWDTAGQER 47
Query: 74 FRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKES 133
FRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE+
Sbjct: 48 FRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN 106
Query: 134 ERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 107 -REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 153
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 1 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 60
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 61 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 118
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VS+++G A +YG FLE SAK+ +NVE+ F L I+
Sbjct: 119 NKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 168
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|358058905|dbj|GAA95303.1| hypothetical protein E5Q_01960 [Mixia osmundae IAM 14324]
Length = 218
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 122/180 (67%), Gaps = 11/180 (6%)
Query: 13 LFKLLLIGDSGVGKSTLLLSFTSDTFE---ELSPTIGVDFKIKHVALG------GKKMKL 63
+ KLLLIG S VGKS+LL FT + F E + T+GVD K+K V K KL
Sbjct: 10 VLKLLLIGSSSVGKSSLLTRFTDEVFASDGESAATVGVDMKVKLVKRTPPGQSTAKTYKL 69
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
A+WDTAGQERFRTLTSSYYRGA G+I+VYDV R+TF NL D W +E++ + N D +++
Sbjct: 70 ALWDTAGQERFRTLTSSYYRGAHGVIVVYDVANRETFVNL-DTWFQELETFCHN-DIVRI 127
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLS 183
+VGNK DKE R+V+ +EG ++ GCLF+ECSAK NVE F+ ++ KI++ P L +
Sbjct: 128 VVGNKTDKEFARMVTAEEGQAWSDSRGCLFMECSAKQGKNVESLFDTVIDKIIENPRLYA 187
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|117939065|dbj|BAF36686.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 191
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/179 (51%), Positives = 118/179 (65%), Gaps = 3/179 (1%)
Query: 16 LLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERF 74
LLLIGDSGVGKS LLL F DT+ TIGVDFKI+ + +GGK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 75 RTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESE 134
RT+TSSYYRGA GII+VYDVT RD+F N+ +W KEI+ Y++ C +LLVGNK D S+
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNV-QMWMKEIESYASEGVC-RLLVGNKCDLTSK 118
Query: 135 RVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKNI 193
+VV A FLE SAK NVEQ F+ + +I+ + + E K ++
Sbjct: 119 KVVDYNTANQLADSLAISFLETSAKNATNVEQAFQTMATEIMKHTAPVHETPQSGKTDV 177
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 135/214 (63%), Gaps = 13/214 (6%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGK 59
+ S+ +DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK
Sbjct: 6 VTSANKSAAYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGK 65
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
++KL IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T +
Sbjct: 66 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT-ES 123
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKI 175
K+L+GNK D ++VV G A E+G FLE SAK +NVE+ F +++ +I
Sbjct: 124 VNKMLIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDIKKRI 183
Query: 176 LDTP-SLLSEGSSGVKKNIFKESPPQNDASTTGC 208
+D L+S + +N+ P T GC
Sbjct: 184 IDNKDELVSNPQTNGTQNLGAPKP-----KTGGC 212
>gi|73535739|pdb|1YZN|A Chain A, Gppnhp-Bound Ypt1p Gtpase
Length = 185
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/168 (57%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 17 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 76
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT +++F N +W +EID Y+T+ +KLLVGN
Sbjct: 77 TAGQERFRTITSSYYRGSHGIIIVYDVTDQESF-NGVKMWLQEIDRYATST-VLKLLVGN 134
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D + +RVV +FA FLE SA NVE F + +I
Sbjct: 135 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQI 182
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 19/215 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D +S R V K+EG FARE+G +F+E SA+T NVE+ F +E+ KI + ++
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQN----------DASTTGCC 209
++G+K I +++ P N A +GCC
Sbjct: 181 EANGIK--IGQQATPTNPALPGSGGAGGAVNSGCC 213
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 127/208 (61%), Gaps = 10/208 (4%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + V + +++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYDVTRR+TF +L W +E ++ N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDVTRRETFNHLTR-WLEEAR-HNANTEMVVMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL----LSE 184
D E R VS KEG DFA G +F+E SAKT NVE F + KI + ++
Sbjct: 121 SDLEHRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTN 180
Query: 185 GSSGVKKNIFKESP---PQNDASTTGCC 209
S G+K S P + T GCC
Sbjct: 181 DSHGIKVGAHSSSAASVPGAASGTAGCC 208
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L+E
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIA---RDIKQRLAESD 185
Query: 187 SGVKKNIFKESPPQND------ASTTGCCSS 211
+ + + + P A + CC S
Sbjct: 186 NRAEPQTIRINQPDQGAGGAQTAQKSACCGS 216
>gi|449268202|gb|EMC79072.1| Ras-related protein Rab-3B [Columba livia]
Length = 219
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 125/201 (62%), Gaps = 8/201 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
TS Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL
Sbjct: 14 TSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRNDKRVKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T D+F + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQD-WATQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-----T 178
LVGNK D E ER+V ++G A + G + E SAK +NV Q FE LV I +
Sbjct: 132 LVGNKCDMEDERIVPVEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESI 191
Query: 179 PSLLSEGSSGVKKNIFKESPP 199
S S G+SG + PP
Sbjct: 192 ESDPSRGASGRSMRLTDNPPP 212
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 128/186 (68%), Gaps = 7/186 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRRDTF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D E+ R V K+EG FARE+G +F+E SAKT NVE+ F +E+ KI D ++
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 185 GSSGVK 190
++G+K
Sbjct: 181 EANGIK 186
>gi|326925412|ref|XP_003208909.1| PREDICTED: ras-related protein Rab-3B-like [Meleagris gallopavo]
Length = 219
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/201 (45%), Positives = 125/201 (62%), Gaps = 8/201 (3%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
TS Q FDY+FKLL+IG+S VGK++ L + DTF T+G+DFK+K V K++KL
Sbjct: 14 TSDQNFDYMFKLLIIGNSSVGKTSFLFRYADDTFTPAFVSTVGIDFKVKTVYRNDKRVKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T D+F + D WA +I YS + + +
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITSEDSFNAVQD-WATQIKTYSWDNAQV-I 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-----T 178
LVGNK D E ER+V ++G A + G + E SAK +NV Q FE LV I +
Sbjct: 132 LVGNKCDMEDERIVPLEKGKHLADQLGFDYFEASAKENINVRQVFERLVDIICEKMSESI 191
Query: 179 PSLLSEGSSGVKKNIFKESPP 199
S S G+SG + PP
Sbjct: 192 ESDPSRGTSGRNVRLTDHPPP 212
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D +R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|162760|gb|AAA30416.1| GTP-binding protein [Bos taurus]
Length = 220
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/206 (43%), Positives = 128/206 (62%), Gaps = 10/206 (4%)
Query: 5 TSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKL 63
+S Q FDY+FK+L+IG+S VGK++ L + D+F T+G+DFK+K + K++KL
Sbjct: 14 SSDQNFDYMFKILIIGNSSVGKTSFLFRYADDSFTPAFVSTVGIDFKVKTIYRNDKRIKL 73
Query: 64 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKL 123
IWDTAGQER+RT+T++YYRGA G I++YD+T ++F + D W+ +I YS++ + L
Sbjct: 74 QIWDTAGQERYRTITTAYYRGAMGFILMYDITNEESFNAVQD-WSTQIKTYSSDNAQV-L 131
Query: 124 LVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-------L 176
LVGNK D E ERVVS + G A G F E SAK +NV+Q FE LV I L
Sbjct: 132 LVGNKCDMEDERVVSSERGRQLADHLGFEFFEASAKDNINVKQTFERLVDVICEKMSESL 191
Query: 177 DTPSLLSEGSSGVKKNIFKESPPQND 202
DT G+ + +++PP D
Sbjct: 192 DTADPAVTGAKQGPQLTDQQAPPHQD 217
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 138/209 (66%), Gaps = 13/209 (6%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLA 64
S + +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL
Sbjct: 3 SNRNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W + ++ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVL----KILDTPS 180
+GNK D E +RVVS ++G A E G FLE SAK+ +N++Q F L +++D
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADIKKRLIDNQK 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCC 209
SSGV N+ ++S +A++ CC
Sbjct: 181 TDVGTSSGV--NVGEKS----EAASGKCC 203
>gi|10129780|emb|CAC08198.1| putative GTP-binding protein [Kluyveromyces lactis]
Length = 206
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/173 (56%), Positives = 120/173 (69%), Gaps = 3/173 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIG+SGVGKS LLL F+ DT+ + TIGVDFKIK V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRG+ GII+VYDVT R++F N +W +EID +T+ +KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGSHGIIIVYDVTDRESF-NGVKMWLQEIDRIATST-VLKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
K D + +RVV +FA FLE SA NVE F + +I ++ S
Sbjct: 122 KCDLKDKRVVEYDVAKEFADANKMPFLETSALDSTNVEDAFLTMARQIKESMS 174
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D+F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GII+VYD+T +F N+ + W + I+ ++ + D ++++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAAS-DVERMIIGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E R VS+ G A EYG FLE SAK +N+++ F L I
Sbjct: 123 CDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 132/211 (62%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + D L++
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDAST------TGCCSS 211
S + K + P S + CC S
Sbjct: 186 SRAEPQTIKINQPDQAGSASQAAPKSACCGS 216
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +DYLFKLLLIGDSGVGK+ LL F+ D F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D ++++G
Sbjct: 63 DTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL 176
NK D R VSK+ G A +YG FLE SAK+ NVE+ F L I+
Sbjct: 121 NKCDMNDRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 131/206 (63%), Gaps = 7/206 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVE+ F + I + S
Sbjct: 129 KADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRS 188
Query: 187 SGVKKNIFKESPPQND---ASTTGCC 209
I ++ P N A+ + CC
Sbjct: 189 EPQTIKINQQDPAANGGQAATKSACC 214
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 133/211 (63%), Gaps = 13/211 (6%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ + TIG+DFKI+ + L GK++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+LVGN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
K D ES+R V +G A EYG F E SAKT +NVEQ F + D L++
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIA---RDIKQRLADTD 185
Query: 187 SGVKKNIFKESPPQNDA------STTGCCSS 211
S + + K + P+ A + CC S
Sbjct: 186 SKAEPSTLKINQPEAGAGGSQTSQKSACCGS 216
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 127/209 (60%), Gaps = 10/209 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ V + GK +KL IWD
Sbjct: 4 EFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EID Y+ N +LVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRNVLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI----LDTPSLLS 183
K D R V +A+E G FLE SAK +NVE+ F + I + + L
Sbjct: 122 KCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAALE 181
Query: 184 EGSSGVKKNIFKESPPQNDAS-TTGCCSS 211
S V + K P Q + ++ CCS+
Sbjct: 182 RKPSNVVQ--MKGRPIQQEQQKSSRCCST 208
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 121/195 (62%), Gaps = 12/195 (6%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
EFDYLFKLLLIGDS VGKS LL F D++ + TIGVDFKI+ + + GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TSSYYRGA GII+VYD+T ++F N+ W EI+ Y+ N KLLVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEINKYA-NDSVRKLLVG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGS 186
NK D RVV +A E G FLE SAK +NVE+ F + I + + GS
Sbjct: 121 NKCDLAESRVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMSAAIKKSKA----GS 176
Query: 187 SGVKKNIFKESPPQN 201
GV E P N
Sbjct: 177 QGV-----LERKPSN 186
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+D+LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKK-WIRNIEEHAS-ADVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E R V+K+ G A EYG F+E SAK VNVE+ F L I
Sbjct: 123 CDMEDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDI 169
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/192 (46%), Positives = 128/192 (66%), Gaps = 13/192 (6%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T+ +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSG 188
+ +R VS++ G A EYG F+E SAK +NVE+ F +L S+ +
Sbjct: 123 CELNEKRQVSRERGEQLAVEYGIKFMETSAKASINVEEAF----------LTLASDIKAK 172
Query: 189 VKKNIFKESPPQ 200
++K + +PP+
Sbjct: 173 MEKRMEANNPPK 184
>gi|449492192|ref|XP_004175545.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Taeniopygia
guttata]
Length = 170
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/150 (59%), Positives = 109/150 (72%), Gaps = 4/150 (2%)
Query: 43 PTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTN 102
P GVDFK+K +++ G K KLAIWDTAGQERFRTLT SYYRGAQG+I+VYDVTRRDTF
Sbjct: 2 PISGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 61
Query: 103 LADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRV 162
L D W E++ Y T D +++LVGNK+DKE+ R V + EG+ FAR++ LF+E SAKT
Sbjct: 62 L-DNWLNELETYCTRNDIVQMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 119
Query: 163 NVEQCFEELVLKILDTPSLLSEGSS--GVK 190
V+ FEELV KI+ TP L S GVK
Sbjct: 120 GVQCAFEELVEKIIQTPGLWESESQNRGVK 149
>gi|358370660|dbj|GAA87271.1| secretion related GTPase (SrgA) [Aspergillus kawachii IFO 4308]
Length = 206
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+L KLLLIGDSGVGKS LL F+ D+F TIG+DFKI+ + L GK++KL IW
Sbjct: 5 RNYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIW 64
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VYDVT +F N+ W ++ +++ + K+L+G
Sbjct: 65 DTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHKILIG 122
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEEL---VLKILDTPSLLS 183
NK D E +R VS ++G A E G FLE SAK +N+E+ F +L + K +DT
Sbjct: 123 NKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINIEKAFYDLASDIKKGMDTSKSEQ 182
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
GS GV +I ++ N + CC
Sbjct: 183 VGSQGV--SIDQQGSGLNGNAGGKCC 206
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 92/195 (47%), Positives = 127/195 (65%), Gaps = 14/195 (7%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ +++ D K+++GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-ADVEKMILGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI-LDTPSLLSEGSS 187
D R V+K++G + A EYG F+E SAK+ NVE+ F L I L E S
Sbjct: 123 CDMNDRRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKMEKRLQEAS- 181
Query: 188 GVKKNIFKESPPQND 202
+PP++D
Sbjct: 182 ---------NPPRHD 187
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/215 (43%), Positives = 139/215 (64%), Gaps = 19/215 (8%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSP-TIGVDFKIKHVALGGKKMKLAIWDT 68
+ YLFK ++IGD+GVGKS LLL FT F+ + TIGV+F + + + GK++KL IWDT
Sbjct: 3 YAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 62
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQE FR++T SYYRGA G ++VYD+TRR+TF +L W ++ +S N + + +L+GNK
Sbjct: 63 AGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLIGNK 120
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLSE 184
D +S R V K+EG FARE+G +F+E SA+T NVE+ F +E+ KI + ++
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 185 GSSGVKKNIFKESPPQNDA----------STTGCC 209
++G+K I +++ P N A +GCC
Sbjct: 181 EANGIK--IGQQATPTNPALPGAGGAGGAVNSGCC 213
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLA 64
+ ++ D FKLLLIGDSGVGK+ ++ F +TF TIG+DFKIK + LGGKK+KL
Sbjct: 2 ANKKSDLFFKLLLIGDSGVGKTCIIFRFADNTFNPSFISTIGIDFKIKTLELGGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T++YYRGA GI++VYDVT +F+N++ W K+ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISK-WLKKIDDHA-NEDVKRML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
VGNK D +RV+S+ +G A YG F+E SA + +NVE+ F L IL+
Sbjct: 120 VGNKCDMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILN 172
>gi|281203354|gb|EFA77554.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 206
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/191 (51%), Positives = 123/191 (64%), Gaps = 4/191 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +F N+ W +EI Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQ-WMQEIQRYACDS-VTRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE-GS 186
K D ++VV ++A G FLE SAK+ NVE F + +I +S G+
Sbjct: 122 KCDLIEKKVVETNVAREYADSAGIPFLETSAKSSANVEDAFMIMASEIKKLQGGISTGGN 181
Query: 187 SGVKKNIFKES 197
+ N+ K S
Sbjct: 182 TNYNTNVVKPS 192
>gi|357133358|ref|XP_003568292.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 136/209 (65%), Gaps = 11/209 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWD 67
++DYL KLLLIGDSGVGKS LLL F+ +F TIG+DFKI+ + L K++KL IWD
Sbjct: 11 DYDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDQKRIKLQIWD 70
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++++ + K+L+GN
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILIGN 128
Query: 128 KVD-KESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLL 182
K D ES+R V +G A EYG F E SAKT +NVEQ F ++ ++ +T S
Sbjct: 129 KADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKP 188
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCCSS 211
+ + + K ++P AS + CC S
Sbjct: 189 EDKTIKINKTEGGDAPA---ASGSACCGS 214
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/160 (54%), Positives = 116/160 (72%), Gaps = 3/160 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDT 64
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ + + D K+L+GNK
Sbjct: 65 AGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLLGNK 122
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
+ S+R VSK+ G A EYG F+E SAK+ +NVE+ F
Sbjct: 123 CELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAF 162
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 83/162 (51%), Positives = 116/162 (71%), Gaps = 3/162 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+ +D+LFKLLLIGDSGVGK+ LL F D+F TIG+DFKI+ + L GKK+KL IW
Sbjct: 3 KSYDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQIW 62
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+T++YYRGA GI++VY++T +F N+ + W + I+ +++ + K+++G
Sbjct: 63 DTAGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKN-WVRNIEEHAS-ANVEKIILG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF 168
NK D E +R VS++ G A EYG F+E SAK +NVE F
Sbjct: 121 NKCDMEDKRQVSRERGAQLAIEYGVKFMETSAKANINVESAF 162
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYLFKLLLIGDSGVGK+ +L F+ D+F TIG+DFKI+ + L GKK+KL IWDT
Sbjct: 4 YDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDT 63
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GII+VYD+T +F N+ + W + I+ ++ + D ++++GNK
Sbjct: 64 AGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAAS-DVERMIIGNK 121
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
D E R VS+ G A EYG FLE SAK +N+++ F L I
Sbjct: 122 CDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 168
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 134/210 (63%), Gaps = 13/210 (6%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPT----IGVDFKIKHVALGGK 59
+ + FD KLL+IGDSGVGK+ LLL + +D+F SPT IG+DFKIK++ L K
Sbjct: 2 ARHENPFDMQIKLLMIGDSGVGKTCLLLRYANDSF---SPTFITTIGIDFKIKNIELDNK 58
Query: 60 KMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQD 119
K+KL IWDTAGQERFRT+T+SY+RGAQGI++VYDVT R +F ++ + W +I ++ +
Sbjct: 59 KVKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA-DVH 116
Query: 120 CIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTP 179
K+L+GNK D ++VVS +EG A EYG F E SAK +NVE F E+ ++ +
Sbjct: 117 VNKILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKN-- 174
Query: 180 SLLSEGSSGVKKNIFKESPPQNDASTTGCC 209
L+ EG K ++ + P GCC
Sbjct: 175 RLMEEGGPHKKDSVNLNAKPA--PVKKGCC 202
>gi|326934043|ref|XP_003213106.1| PREDICTED: ras-related protein Rab-18-B-like [Meleagris gallopavo]
Length = 244
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 118/167 (70%), Gaps = 5/167 (2%)
Query: 44 TIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL 103
T+GVDFK+K + + G ++LAIWDTAGQERFR+L SYYRG QGI++VYDVTR+DTFT L
Sbjct: 79 TMGVDFKVKKMVVNGHTVQLAIWDTAGQERFRSLNPSYYRGTQGIVLVYDVTRKDTFTGL 138
Query: 104 ADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVN 163
+ W E+++Y+T + +K+LVGNK DK +R V ++EG+ FA++ LF+E SAKT
Sbjct: 139 -ESWLNELEIYTTKSNTVKMLVGNKTDK-PDREVERREGLQFAKKRSLLFIETSAKTEDG 196
Query: 164 VEQCFEELVLKILDTPSLLSEGSSGVKKNI-FKESPPQNDASTTGCC 209
V+ FEELV+KIL TP+LL + KK + KES Q + T C
Sbjct: 197 VQHAFEELVIKILQTPNLLDRSTE--KKGVQLKESSQQEKSVCTAYC 241
>gi|432917455|ref|XP_004079517.1| PREDICTED: ras-related protein Rab-8A-like [Oryzias latipes]
Length = 209
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 132/208 (63%), Gaps = 6/208 (2%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMK 62
S+ + +DYLFKLLLIGDSGVGK+ +L F+ D F TIG+DFKI+ + L GKK+K
Sbjct: 2 SSMAKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+T++YYRGA GI++VYD+T +F N+ + W + I+ ++++ D K
Sbjct: 62 LQIWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVEK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+++GNK D +R V+K G A EYG F+E SAK+ +NVE F L I
Sbjct: 120 MVLGNKCDINDKRQVTKMGGEKLALEYGIKFMETSAKSNINVENAFLTLARDIKTKMDSK 179
Query: 183 SEGSS--GVKKNIFKESPPQNDASTTGC 208
EG++ G + K S PQ S C
Sbjct: 180 LEGNAPQGSSHGV-KISEPQKKTSFFRC 206
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.317 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,072,192,424
Number of Sequences: 23463169
Number of extensions: 119599122
Number of successful extensions: 668601
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19543
Number of HSP's successfully gapped in prelim test: 6951
Number of HSP's that attempted gapping in prelim test: 613493
Number of HSP's gapped (non-prelim): 27512
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)