BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028292
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O23657|RABC1_ARATH Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2
SV=1
Length = 212
Score = 365 bits (937), Expect = e-100, Method: Compositional matrix adjust.
Identities = 174/200 (87%), Positives = 191/200 (95%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q EFDYLFK+LLIGDSGVGKS+LLLSFTS+TF++LSPTIGVDFK+K++ +G KK
Sbjct: 1 MGSSSGQPEFDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEKK 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNL+DIWAKEIDLYSTNQDC
Sbjct: 61 LKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVDKESER VSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKIL+TPS
Sbjct: 121 IKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQ 200
L +EGSSG KKNIFK++P Q
Sbjct: 181 LTAEGSSGGKKNIFKQNPAQ 200
>sp|O49841|RAC2A_ARATH Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1
SV=1
Length = 210
Score = 322 bits (824), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 178/210 (84%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q +D FK+LLIGDSGVGKS+LL+SF S + E+L+PTIGVDFKIK + +GGK+
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL D+W KEI+LYSTNQ+C
Sbjct: 61 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQEC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
+++LVGNKVD+ESER VS++EGI A+E C+FLECSA+TR NVEQCFEEL LKI++ PS
Sbjct: 121 VRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCS 210
LL EGSS VK+NI K+ P + +GCCS
Sbjct: 181 LLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>sp|Q9SF92|RAC2B_ARATH Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2
SV=1
Length = 205
Score = 274 bits (700), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 140/211 (66%), Positives = 169/211 (80%), Gaps = 6/211 (2%)
Query: 1 MASSTSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELSPTIGVDFKIKHVALGGKK 60
M SS+ Q +D FK+LLIGDSGVGKS+LLLSF S + E+L+PTIGVDFKIK + + GK+
Sbjct: 1 MGSSSGQSGYDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGKR 60
Query: 61 MKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDC 120
+KL IWDTAGQE+FRTLTSSY+RG+QGII+VYDVT+R+TF NLADIWAKEI+LYSTN DC
Sbjct: 61 LKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHDC 120
Query: 121 IKLLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPS 180
IK+LVGNKVD+ESER VS++EG+ A++ CLF ECSA+TR NV CFEEL LKI++ PS
Sbjct: 121 IKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVPS 180
Query: 181 LLSEGSSGVKKNIFKESPPQNDASTTGCCSS 211
LL EGSS VK+ P A CCSS
Sbjct: 181 LLEEGSSSVKRK------PDYRAHQGRCCSS 205
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 230 bits (587), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 118/199 (59%), Positives = 141/199 (70%), Gaps = 3/199 (1%)
Query: 11 DYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWDTA 69
DY FK+LL+GDSGVGKS +L FTS FEE + TIGVDFK+K++ GK+ KL IWDTA
Sbjct: 7 DYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIWDTA 66
Query: 70 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKV 129
GQERFRTLTSSYYRGAQGII VYDVTRRDTF +L W +E D+YST + IK++V NKV
Sbjct: 67 GQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVANKV 126
Query: 130 DKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
D ++R VS +EG DFAR +GCLF+E SA+ + V Q FEEL+LKILDTP LL + G
Sbjct: 127 DLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLETTAVGG 186
Query: 190 KKNIFKESPPQNDASTTGC 208
K P A C
Sbjct: 187 IK--LGAVPTGQQAGVCSC 203
>sp|Q6DHC1|RB18B_DANRE Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1
Length = 205
Score = 219 bits (558), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 115/200 (57%), Positives = 147/200 (73%), Gaps = 8/200 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +A+ G + KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVT+RDTFT L + W E++ Y T D +K+LVGNK+DK+
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDKD 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL--SEGSSGVK 190
+ R V + EG+ FAR++ LF+E SAKTR V+ FEELV KIL TP L S + GV+
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGVQ 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
++ PQ + G CS
Sbjct: 187 ---LSDNEPQRQGACGGYCS 203
>sp|Q5ZLG1|RAB18_CHICK Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1
Length = 206
Score = 211 bits (538), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 136/180 (75%), Gaps = 5/180 (2%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D +K+LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS--GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQNKGVK 186
>sp|Q5EB77|RAB18_RAT Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1
Length = 206
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 114/199 (57%), Positives = 144/199 (72%), Gaps = 11/199 (5%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCC 209
+ P+ ++ G C
Sbjct: 187 LS------PREESHGGGAC 199
>sp|Q0IIG8|RAB18_BOVIN Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1
Length = 206
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|P35293|RAB18_MOUSE Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2
Length = 206
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 116/200 (58%), Positives = 146/200 (73%), Gaps = 7/200 (3%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL-SEGSS-GVK 190
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L SE + GVK
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGVK 186
Query: 191 KNIFKESPPQNDASTTGCCS 210
+ +ES + + G CS
Sbjct: 187 LSHREES--RGGGACGGYCS 204
>sp|Q5R5H5|RAB18_PONAB Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1
Length = 206
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|Q9NP72|RAB18_HUMAN Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1
Length = 206
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 106/169 (62%), Positives = 131/169 (77%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+LLL FT DTF+ EL+ TIGVDFK+K +++ G K KLAIWDTAGQE
Sbjct: 9 LKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQE 68
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I+VYDVTRRDTF L D W E++ Y T D + +LVGNK+DKE
Sbjct: 69 RFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKE 127
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ R V + EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L
Sbjct: 128 N-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGL 175
>sp|Q8MXS1|RAB18_CAEEL Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=3
SV=1
Length = 203
Score = 193 bits (491), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 94/169 (55%), Positives = 128/169 (75%), Gaps = 3/169 (1%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ +A+ G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L + W +E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKL-NHWMQEVDTYCTNDNIIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSL 181
+ RVV+++EG+ FA+ + LF+E SAKT+ V+ FEEL+ KI+ TP L
Sbjct: 131 N-RVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDL 178
>sp|Q05976|RB18A_LYMST Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2
SV=1
Length = 202
Score = 192 bits (489), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/171 (56%), Positives = 125/171 (73%), Gaps = 3/171 (1%)
Query: 20 GDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQERFRTLT 78
G+SGVGKS+LLL FT DTF+ E + TIGVDFK+K + + G K KLAIWDTAGQERFRTLT
Sbjct: 16 GESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLT 75
Query: 79 SSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKESERVVS 138
SYYRGAQG+I+VYDV+ + +F L D W E++ +ST D +K+LVGNK+D+ + V+
Sbjct: 76 PSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLVGNKIDRANHE-VT 133
Query: 139 KKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGV 189
K EG+ FAR++ LF+E SAKT V+ FEELV KI+ TP L S +
Sbjct: 134 KDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSSKNL 184
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 135/204 (66%), Gaps = 8/204 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDT--PSLLSEG 185
K D +++VV +FA G FLE SAK NVEQ F + +I P S G
Sbjct: 122 KCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGG 181
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S K N+ +S P +S GCC
Sbjct: 182 SE--KSNVNIQSTPVK-SSGGGCC 202
>sp|Q54GY8|RAB18_DICDI Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18
PE=3 SV=1
Length = 202
Score = 191 bits (486), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 141/203 (69%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
E D +K+LLIGDS VGK++++ F+ DTF+E L TIGV+FK+K V + GKK+ L IWD
Sbjct: 2 EEDKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWD 61
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQE+FR L SSYYRGA GII+ YDVT+R++F NL + W E++ ++ + +KLLVGN
Sbjct: 62 TAGQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGN 120
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K+DKE+ R V+++EG +FA++ LF+ECSAK+++ ++Q FEEL KI++ P S
Sbjct: 121 KIDKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNTSSSQP 179
Query: 188 GVKK--NIFKESPPQNDASTTGC 208
+ ++ E P ++ C
Sbjct: 180 KQRNTGSVKVEDEPDHNQGVCSC 202
>sp|P10536|RAB1B_RAT Ras-related protein Rab-1B OS=Rattus norvegicus GN=Rab1b PE=1 SV=1
Length = 201
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKSAS-GGCC 201
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 133/207 (64%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 191 bits (484), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 135/204 (66%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P AS GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAS-GGCC 201
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 190 bits (483), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 108/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT R+++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 190 bits (483), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 105/207 (50%), Positives = 135/207 (65%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
ST ++DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 STMNPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV ++A + G FLE SAK NVEQ F + +I + +
Sbjct: 120 LLVGNKSDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPI 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ S S P + A+ GCC
Sbjct: 180 TAASDSKPSVKINSSTPVS-ANKGGCC 205
>sp|Q52NJ2|RAB1A_PIG Ras-related protein Rab-1A OS=Sus scrofa GN=RAB1A PE=2 SV=3
Length = 205
Score = 189 bits (481), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/207 (51%), Positives = 132/207 (63%), Gaps = 4/207 (1%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S+ E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +EID Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
LLVGNK D +++VV +FA G FLE SAK NVEQ F + +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
+ K N+ +S P S GCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQ-SGGGCC 205
>sp|Q39571|YPTC1_CHLRE GTP-binding protein YPTC1 OS=Chlamydomonas reinhardtii GN=YPTC1
PE=3 SV=1
Length = 203
Score = 189 bits (480), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 110/206 (53%), Positives = 133/206 (64%), Gaps = 11/206 (5%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPSLLS 183
K D S++VV FA E G FLE SAK NVEQ F E+ ++ P
Sbjct: 122 KSDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPIPTK 181
Query: 184 EGSSGVKKNIFKESPPQNDASTTGCC 209
G V+ +E P N S++ CC
Sbjct: 182 AGGPVVRP---QEGKPINSKSSS-CC 203
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 130/204 (63%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D + +VV+ + FA E G F+E SAK NV+Q F + I D + ++
Sbjct: 122 KSDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAAN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P N T CCSS
Sbjct: 182 ARPATVQIRGQPVN--QKTSCCSS 203
>sp|Q2HJH2|RAB1B_BOVIN Ras-related protein Rab-1B OS=Bos taurus GN=RAB1B PE=2 SV=1
Length = 201
Score = 189 bits (479), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKQAG-GGCC 201
>sp|Q5RE13|RAB1B_PONAB Ras-related protein Rab-1B OS=Pongo abelii GN=RAB1B PE=2 SV=1
Length = 201
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>sp|Q9H0U4|RAB1B_HUMAN Ras-related protein Rab-1B OS=Homo sapiens GN=RAB1B PE=1 SV=1
Length = 201
Score = 189 bits (479), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 134/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKPAG-GGCC 201
>sp|P90726|RAB18_CAEBR Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18
PE=3 SV=1
Length = 202
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 96/196 (48%), Positives = 132/196 (67%), Gaps = 8/196 (4%)
Query: 14 FKLLLIGDSGVGKSTLLLSFTSDTFE-ELSPTIGVDFKIKHVALGGKKMKLAIWDTAGQE 72
K+L+IG+SGVGKS+L+L F D F+ E + TIGVDF++ + + G ++KLAIWDTAGQE
Sbjct: 12 LKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVKLAIWDTAGQE 71
Query: 73 RFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNKVDKE 132
RFRTLT SYYRGAQG+I VYDVT R +F L W E+D Y TN + IK++V NK+D
Sbjct: 72 RFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIKMMVANKIDMP 130
Query: 133 SERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSSGVKKN 192
+ R V+++EG+ FA+ + LF+E SAKT+ V+ FEEL+ KI+ TP L +
Sbjct: 131 N-RTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLWDN-----DRP 184
Query: 193 IFKESPPQNDASTTGC 208
F+ P + +S C
Sbjct: 185 TFRLGQPTDTSSGNLC 200
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KNDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + P N S GCCSS
Sbjct: 180 GAKPPTVQIRGQPVNQQS--GCCSS 202
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 187 bits (475), Expect = 4e-47, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D RVVS + G A E G FLE SAK NVE+ F + +I + + S+ ++
Sbjct: 122 KCDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQPAT 179
Query: 188 GVKKNIFKESPPQNDASTTGCCS 210
K + Q A + CCS
Sbjct: 180 NASKPATVQMRGQPVAQQSSCCS 202
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 187 bits (474), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 108/205 (52%), Positives = 132/205 (64%), Gaps = 8/205 (3%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F D++ + TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+ YDVT ++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D S++VVS + FA E G FLE SAK NVE+ F + I + S+ +
Sbjct: 122 KCDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--KTRMASQPAG 179
Query: 188 GVKKNIFK-ESPPQNDASTTGCCSS 211
G K + P N S GCCSS
Sbjct: 180 GSKPPTVQIRGQPVNQQS--GCCSS 202
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 187 bits (474), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 107/204 (52%), Positives = 131/204 (64%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y+ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++RVVS +FA G FLE SAK NVE+ F + +I ++
Sbjct: 122 KSDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQI---KKRMANAPV 178
Query: 188 GVKKNIFKESPPQNDASTTG--CC 209
K + K +P Q S G CC
Sbjct: 179 APKAGV-KLTPGQQVPSNGGSKCC 201
>sp|P31584|YPTV1_VOLCA GTP-binding protein yptV1 OS=Volvox carteri GN=YPTV1 PE=3 SV=1
Length = 203
Score = 186 bits (472), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 119/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ V L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D ++VV + FA E G FLE SAK NVEQ F + +I
Sbjct: 122 KSDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 128/204 (62%), Gaps = 5/204 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F+ D++ E TIGVDFKI+ V GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W EID Y+++ + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D R + + FA E G F+E SAK NVEQ F + I + + G++
Sbjct: 122 KSDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNN 181
Query: 188 GVKKNIFKESPPQNDASTTGCCSS 211
+ P A GCCS+
Sbjct: 182 ARPPTVQIRGQPV--AQKNGCCST 203
>sp|Q06AU7|RAB1B_PIG Ras-related protein Rab-1B OS=Sus scrofa GN=RAB1B PE=2 SV=1
Length = 201
Score = 185 bits (470), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 106/204 (51%), Positives = 133/204 (65%), Gaps = 9/204 (4%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQER RT+TSSYYRGA GII+VYDVT ++++ N+ W +EID Y++ ++ KLLVGN
Sbjct: 64 TAGQERGRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEG-- 185
K D +++VV +FA G FLE SAK NVEQ F + +I + G
Sbjct: 122 KSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI---KKRMGPGAA 178
Query: 186 SSGVKKNIFKESPPQNDASTTGCC 209
S G + N+ +S P A GCC
Sbjct: 179 SGGERPNLKIDSTPVKQAG-GGCC 201
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 184 bits (468), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 97/168 (57%), Positives = 118/168 (70%), Gaps = 3/168 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEELS-PTIGVDFKIKHVALGGKKMKLAIWD 67
E D+ FK+LLIGDSGVGKS LLL F D++ + TIGVDFKIK + L GK +KL IWD
Sbjct: 6 EHDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWD 65
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGAQGII+VYD T +D+FTN+ W EID Y+ ++ KLLVGN
Sbjct: 66 TAGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGN 123
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKI 175
K D +E+VV + FA YG F+E SAK NVE+CF + I
Sbjct: 124 KTDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>sp|P33723|YPT1_NEUCR GTP-binding protein ypt1 OS=Neurospora crassa (strain ATCC 24698 /
74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987) GN=ypt-1
PE=3 SV=1
Length = 203
Score = 184 bits (467), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 106/203 (52%), Positives = 131/203 (64%), Gaps = 5/203 (2%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GI +VYDVT D+F N+ W +EID Y+T + KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD-TPSLLSEGS 186
K D ++VV +FA G FLE SAK NVEQ F + +I + S ++ +
Sbjct: 122 KSDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGSSIATNN 181
Query: 187 SGVKKNIFKESPPQNDASTTGCC 209
+ N+ N++S GCC
Sbjct: 182 TKASVNVSPGHGVSNNSS-GGCC 203
>sp|P11620|YPT1_SCHPO GTP-binding protein ypt1 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt1 PE=1 SV=2
Length = 203
Score = 182 bits (461), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 103/202 (50%), Positives = 127/202 (62%), Gaps = 3/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWD 67
E+DYLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ L GK +KL IWD
Sbjct: 4 EYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT +D+F N+ W +EID Y+ + +LLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLQEIDRYAV-EGVNRLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D ++VV +FA FLE SAK NVEQ F + +I + + SS
Sbjct: 122 KSDMVDKKVVEYSVAKEFADSLNIPFLETSAKDSTNVEQAFLTMSRQIKERMGNNTFASS 181
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
K ++ S++ CC
Sbjct: 182 NAKSSVKVGQGTNVSQSSSNCC 203
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 180 bits (457), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 102/214 (47%), Positives = 134/214 (62%), Gaps = 24/214 (11%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+ F E SAK +N+E+ F L IL
Sbjct: 120 LGNKCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDIL-------- 171
Query: 185 GSSGVKKNIFKESPPQN-DASTTG-------CCS 210
+K KE +N D STTG CCS
Sbjct: 172 -----QKTPVKEPDRENVDISTTGGGTGLKKCCS 200
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 179 bits (455), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 118/171 (69%), Gaps = 2/171 (1%)
Query: 8 QEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIW 66
+E+DYLFK+++IGDSG GKS+LLL F +T+ E TIGVDFKIK V + +KL IW
Sbjct: 2 KEYDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIW 61
Query: 67 DTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVG 126
DTAGQERFRT+TS+YYRGA GII VYDVT + +F ++ + W ++ID Y+T+ C KLL+G
Sbjct: 62 DTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIG 120
Query: 127 NKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILD 177
NK+D RVVS E A + ++E SAKT NVE+ F + + D
Sbjct: 121 NKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKD 171
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 179 bits (453), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 134/207 (64%), Gaps = 6/207 (2%)
Query: 4 STSQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMK 62
S SQ+ +D L KLLLIGDSGVGKS LLL F D F TIG+DFKI+ + +G +++K
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCEDQFTPSFITTIGIDFKIRTIDIGNQRVK 61
Query: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIK 122
L +WDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + + Y+ N+
Sbjct: 62 LQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEGVEL 119
Query: 123 LLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLL 182
+LVGNK D + +RVVS ++G A ++G FLE S+KT +NVE+CF + +I DT +
Sbjct: 120 ILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRDTVAKT 179
Query: 183 SEGSSGVKKNIFKESPPQNDASTTGCC 209
SG I +N AS CC
Sbjct: 180 KGNESG-SGGINIAEGEENSASK--CC 203
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 90/176 (51%), Positives = 124/176 (70%), Gaps = 7/176 (3%)
Query: 10 FDYLFKLLLIGDSGVGKSTLLLSFTSDTF-EELSPTIGVDFKIKHVALGGKKMKLAIWDT 68
+DYL KLLLIGDSGVGKS LLL F+ D+F TIG+DFKI+ + L GK++KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWDT 71
Query: 69 AGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGNK 128
AGQERFRT+T++YYRGA GI++VYDVT +F N+ + W + I+ ++T+ K+L+GNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS-VNKMLIGNK 129
Query: 129 VDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCF----EELVLKILDTPS 180
D ++VV G A EYG FLE SAK +NVE+ F +++ +++DTP+
Sbjct: 130 CDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKRMIDTPN 185
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 177 bits (450), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 123/185 (66%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+D KIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D E +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
>sp|P34139|RAB1A_DICDI Ras-related protein Rab-1A OS=Dictyostelium discoideum GN=rab1A
PE=2 SV=2
Length = 202
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 128/202 (63%), Gaps = 4/202 (1%)
Query: 9 EFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLAIWD 67
++ YLFKLLLIGDSGVGKS LLL F DT+ E TIGVDFKI+ + L GK +KL IWD
Sbjct: 4 DYHYLFKLLLIGDSGVGKSCLLLRFADDTYSESFISTIGVDFKIRTIELNGKTIKLQIWD 63
Query: 68 TAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLLVGN 127
TAGQERFRT+TSSYYRGA GII+VYDVT + TF N+ W +EID ++ ++ KLLVGN
Sbjct: 64 TAGQERFRTITSSYYRGAHGIIVVYDVTDKLTFENVRQ-WLQEIDRFAC-ENVNKLLVGN 121
Query: 128 KVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSEGSS 187
K D +++VV FA FLE SAK NVEQ F + +I + + S+ +
Sbjct: 122 KSDLVAKKVVDFNTAKAFADSLQIPFLETSAKQSTNVEQAFMTMATEIKNRLT-ASQPTQ 180
Query: 188 GVKKNIFKESPPQNDASTTGCC 209
V KN + +GCC
Sbjct: 181 TVDKNKVVPGSSAPISPKSGCC 202
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 177 bits (449), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 124/185 (67%), Gaps = 3/185 (1%)
Query: 6 SQQEFDYLFKLLLIGDSGVGKSTLLLSFTSDTFEE-LSPTIGVDFKIKHVALGGKKMKLA 64
+++ +D LFKLLLIGDSGVGK+ +L F+ D F TIG+DFKIK V L GKK+KL
Sbjct: 2 AKKTYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQ 61
Query: 65 IWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLADIWAKEIDLYSTNQDCIKLL 124
IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ID ++ N+D ++L
Sbjct: 62 IWDTAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERML 119
Query: 125 VGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILDTPSLLSE 184
+GNK D + +RVV K +G ARE+G F E SAK +N+E+ F L IL +
Sbjct: 120 LGNKCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEP 179
Query: 185 GSSGV 189
S V
Sbjct: 180 NSENV 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.382
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 73,747,494
Number of Sequences: 539616
Number of extensions: 2914038
Number of successful extensions: 18847
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1045
Number of HSP's successfully gapped in prelim test: 486
Number of HSP's that attempted gapping in prelim test: 16059
Number of HSP's gapped (non-prelim): 1569
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 59 (27.3 bits)