BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028294
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 417 bits (1072), Expect = e-114, Method: Compositional matrix adjust.
Identities = 199/210 (94%), Positives = 202/210 (96%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG D N
Sbjct: 121 ADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ SGIKVGYGR QGPSGARDGTV+QRGGCC
Sbjct: 181 ESSGIKVGYGRPQGPSGARDGTVAQRGGCC 210
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 414 bits (1064), Expect = e-113, Method: Compositional matrix adjust.
Identities = 195/211 (92%), Positives = 202/211 (95%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TA KILQNIQEG D N
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ SGIKVGYGR QGPSG+RDG V+QRGGCCS
Sbjct: 181 ESSGIKVGYGRPQGPSGSRDGAVAQRGGCCS 211
>gi|224102877|ref|XP_002312839.1| predicted protein [Populus trichocarpa]
gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa]
gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 413 bits (1061), Expect = e-113, Method: Compositional matrix adjust.
Identities = 197/211 (93%), Positives = 201/211 (95%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDARPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI TA KILQNIQEG D N
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIGTAGKILQNIQEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ SGIKVGYGR QG SGARDGTV+QRGGCCS
Sbjct: 181 ESSGIKVGYGRPQGASGARDGTVAQRGGCCS 211
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 410 bits (1055), Expect = e-112, Method: Compositional matrix adjust.
Identities = 197/211 (93%), Positives = 203/211 (96%), Gaps = 2/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAA+ILQNIQEG D N
Sbjct: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFDLSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ SGIKVGYGR QGPSG DGTVSQRGGCC+
Sbjct: 181 ESSGIKVGYGRPQGPSG--DGTVSQRGGCCN 209
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 407 bits (1047), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/210 (91%), Positives = 201/210 (95%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAH+RAVSKEEGEQFAKE+GLLFLEASARTAQNVEEAFIKTAAKILQNIQ+G D N
Sbjct: 121 CDLAHKRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ SGIKVGYGR QG +G RDGT+SQ GGCC
Sbjct: 181 ESSGIKVGYGRTQGAAGGRDGTISQGGGCC 210
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 404 bits (1039), Expect = e-111, Method: Compositional matrix adjust.
Identities = 192/211 (90%), Positives = 199/211 (94%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDSRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TA KILQNIQEG D N
Sbjct: 121 CDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYGR QG GARDGTVS RGGCCS
Sbjct: 181 ESFGIKVGYGRPQGQPGARDGTVSARGGCCS 211
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 404 bits (1037), Expect = e-110, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 201/210 (95%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+G D N
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ SGIK+GYGR QG +G RDGT+SQ GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>gi|363808076|ref|NP_001241959.1| uncharacterized protein LOC100797461 [Glycine max]
gi|255639407|gb|ACU19999.1| unknown [Glycine max]
Length = 211
Score = 398 bits (1023), Expect = e-109, Method: Compositional matrix adjust.
Identities = 189/211 (89%), Positives = 199/211 (94%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV+ID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDSRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI+TA KILQNI+EG D N
Sbjct: 121 CDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIKEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYGR QG SGARDGTVS +GG CS
Sbjct: 181 ESFGIKVGYGRPQGQSGARDGTVSAKGGRCS 211
>gi|6624302|dbj|BAA88497.1| small GTP-binding protein [Carica papaya]
Length = 211
Score = 397 bits (1019), Expect = e-108, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 198/210 (94%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDGRPIKLQI
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVAIDGRPIKLQIR 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL+HRRAVSKEEGEQFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQEG +D N
Sbjct: 121 SDLSHRRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIRTAAKILQNIQEGVIDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ SGIK GYGR QG +GARDG V+QR GCC
Sbjct: 181 ESSGIKFGYGRPQGTAGARDGAVAQRSGCC 210
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 395 bits (1015), Expect = e-108, Method: Compositional matrix adjust.
Identities = 186/211 (88%), Positives = 197/211 (93%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+I L+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVSKEEGEQFAKENGLLF+EASA+TAQNVEEAFIKTAAKILQNIQ+G D N
Sbjct: 121 CDLSHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQNIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYGR QG +G RDGTV+ G CCS
Sbjct: 181 ETCGIKVGYGRPQGQAGGRDGTVAAGGACCS 211
>gi|449443494|ref|XP_004139512.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 380 bits (975), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/211 (84%), Positives = 191/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG +Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGATAQSGGCCS 211
>gi|16755592|gb|AAL28022.1| small GTPase Rab2 [Nicotiana tabacum]
Length = 211
Score = 379 bits (973), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/211 (84%), Positives = 191/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+EASA+TAQNVEEAFI+TA+ I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIRTASTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG SQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGAASQGGGCCS 211
>gi|15235981|ref|NP_193450.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
gi|297800394|ref|XP_002868081.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|75279776|sp|P92963.1|RAB1C_ARATH RecName: Full=Ras-related protein RABB1c; Short=AtRABB1c; AltName:
Full=Ras-related protein Rab2A; Short=AtRab2A
gi|1765896|emb|CAA70498.1| Rab2-like protein [Arabidopsis thaliana]
gi|5281023|emb|CAB45962.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268468|emb|CAB80988.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|27311815|gb|AAO00873.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|30023652|gb|AAP13359.1| At4g17170 [Arabidopsis thaliana]
gi|297313917|gb|EFH44340.1| hypothetical protein ARALYDRAFT_493160 [Arabidopsis lyrata subsp.
lyrata]
gi|332658457|gb|AEE83857.1| RAB GTPase homolog B1C [Arabidopsis thaliana]
Length = 211
Score = 379 bits (972), Expect = e-103, Method: Compositional matrix adjust.
Identities = 178/210 (84%), Positives = 191/210 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVGYG GPSG RDG+ SQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210
>gi|224089509|ref|XP_002308739.1| predicted protein [Populus trichocarpa]
gi|118487262|gb|ABK95459.1| unknown [Populus trichocarpa]
gi|222854715|gb|EEE92262.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 377 bits (969), Expect = e-102, Method: Compositional matrix adjust.
Identities = 178/211 (84%), Positives = 191/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG +Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGGSAQAGGCCS 211
>gi|255637328|gb|ACU18994.1| unknown [Glycine max]
Length = 211
Score = 376 bits (966), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/211 (83%), Positives = 190/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPFASAGGCCS 211
>gi|225447452|ref|XP_002263290.1| PREDICTED: ras-related protein RABB1c [Vitis vinifera]
gi|296085073|emb|CBI28488.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/211 (83%), Positives = 190/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGE FAKE+GL+F+EASA+TAQNVEEAFI TA+ I + IQEG D N
Sbjct: 121 CDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFISTASTIYKKIQEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG+ SQ GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 211
>gi|356555789|ref|XP_003546212.1| PREDICTED: ras-related protein RABB1c-like [Glycine max]
gi|1370176|emb|CAA98165.1| RAB2A [Lotus japonicus]
Length = 211
Score = 376 bits (965), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/211 (83%), Positives = 190/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|357448155|ref|XP_003594353.1| Small GTP binding protein Rab2 [Medicago truncatula]
gi|124360890|gb|ABN08862.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|217075310|gb|ACJ86015.1| unknown [Medicago truncatula]
gi|355483401|gb|AES64604.1| Small GTP binding protein Rab2 [Medicago truncatula]
Length = 211
Score = 375 bits (964), Expect = e-102, Method: Compositional matrix adjust.
Identities = 177/211 (83%), Positives = 189/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>gi|388495178|gb|AFK35655.1| unknown [Lotus japonicus]
Length = 211
Score = 375 bits (963), Expect = e-102, Method: Compositional matrix adjust.
Identities = 176/211 (83%), Positives = 190/211 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|388493968|gb|AFK35050.1| unknown [Medicago truncatula]
Length = 211
Score = 374 bits (960), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/211 (83%), Positives = 188/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+EASA+T QNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLIFMEASAKTTQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>gi|351726934|ref|NP_001238167.1| guanine nucleotide regulatory protein [Glycine max]
gi|1208537|gb|AAA90955.1| guanine nucleotide regulatory protein [Glycine max]
Length = 211
Score = 374 bits (959), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/211 (83%), Positives = 189/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLE ARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEHARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|147818090|emb|CAN73550.1| hypothetical protein VITISV_005966 [Vitis vinifera]
Length = 237
Score = 373 bits (957), Expect = e-101, Method: Compositional matrix adjust.
Identities = 188/239 (78%), Positives = 197/239 (82%), Gaps = 30/239 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP------ 54
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGR
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRTHQTPDL 60
Query: 55 ----------------------IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
+ + + AGQESFRSITRSYYRGAAGALLVYDITRRE
Sbjct: 61 GHLLLLXLELXFYGIFYXYPSJVIVTNFIHAGQESFRSITRSYYRGAAGALLVYDITRRE 120
Query: 93 TFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASART 152
TFNHL+SWLEDARQHANPNM+IML+GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASART
Sbjct: 121 TFNHLASWLEDARQHANPNMTIMLIGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASART 180
Query: 153 AQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
AQNVEEAFIKTAA+ILQNIQEG D N+ SGIKVGYGR QGPSG DGTVSQRGGCC+
Sbjct: 181 AQNVEEAFIKTAARILQNIQEGVFDLSNESSGIKVGYGRPQGPSG--DGTVSQRGGCCN 237
>gi|388514081|gb|AFK45102.1| unknown [Lotus japonicus]
Length = 211
Score = 372 bits (956), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/211 (83%), Positives = 189/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAK+ GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKDLGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSASAGGCCS 211
>gi|224124750|ref|XP_002329939.1| predicted protein [Populus trichocarpa]
gi|118484431|gb|ABK94092.1| unknown [Populus trichocarpa]
gi|222871961|gb|EEF09092.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 372 bits (955), Expect = e-101, Method: Compositional matrix adjust.
Identities = 176/211 (83%), Positives = 189/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 SDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG G SG RDG +Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGSSGGRDGASAQAGGCCS 211
>gi|388501410|gb|AFK38771.1| unknown [Medicago truncatula]
Length = 211
Score = 367 bits (943), Expect = 1e-99, Method: Compositional matrix adjust.
Identities = 174/211 (82%), Positives = 186/211 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSCAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFR ITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRPITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+EASA+ AQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLIFMEASAKAAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG + GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGPSAAGGGCCS 211
>gi|449434064|ref|XP_004134816.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 367 bits (942), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 171/211 (81%), Positives = 189/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+TI+ +PIKLQIW
Sbjct: 1 MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLAHRRAVS EEGE FAKE+GL+F+EASA+TAQNVEEAF+KTAA I + IQ+G D N
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG+R+G+ +Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
>gi|449491237|ref|XP_004158837.1| PREDICTED: ras-related protein RABB1c-like [Cucumis sativus]
Length = 211
Score = 363 bits (933), Expect = 2e-98, Method: Compositional matrix adjust.
Identities = 170/211 (80%), Positives = 188/211 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYI+IGDTGVGKSCLLLQFTD RFQPVHDLTIGVEFGARM+TI+ +PIKLQIW
Sbjct: 1 MSYAYLFKYIVIGDTGVGKSCLLLQFTDNRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAA ALLVYDITRRETFNHL SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAARALLVYDITRRETFNHLISWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLAHRRAVS EEGE FAKE+GL+F+EASA+TAQNVEEAF+KTAA I + IQ+G D N
Sbjct: 121 SDLAHRRAVSTEEGELFAKEHGLIFMEASAKTAQNVEEAFVKTAATIFKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG+R+G+ +Q GGCCS
Sbjct: 181 ESYGIKVGYGGIPGPSGSREGSSAQAGGCCS 211
>gi|168046616|ref|XP_001775769.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162672921|gb|EDQ59452.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 212
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 171/212 (80%), Positives = 183/212 (86%), Gaps = 1/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+E SA+TAQNVE+AFI TAAKI Q I+EG D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLVFMETSAKTAQNVEDAFINTAAKIYQKIEEGIFDVSN 180
Query: 181 DQSGIKVGYG-RGQGPSGARDGTVSQRGGCCS 211
+ GIKVGY T +Q GGCCS
Sbjct: 181 ESYGIKVGYSTWTASGGTGGGNTSAQSGGCCS 212
>gi|357164075|ref|XP_003579941.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 356 bits (914), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 170/210 (80%), Positives = 184/210 (87%), Gaps = 1/210 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAK+NGL+F+EASA+TAQNVEE F+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKDNGLIFMEASAKTAQNVEEGFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVGY G SG + SQ GGCC
Sbjct: 181 ESYGIKVGY-VVPGQSGGAGASSSQGGGCC 209
>gi|57547575|gb|AAW52512.1| small GTP-binding protein [Triticum aestivum]
Length = 210
Score = 355 bits (911), Expect = 6e-96, Method: Compositional matrix adjust.
Identities = 169/210 (80%), Positives = 183/210 (87%), Gaps = 1/210 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKENGL+F+EASA+TAQNVEE F+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSFEEGEQFAKENGLIFMEASAKTAQNVEEGFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVGY G +G + SQ G CC
Sbjct: 181 ESYGIKVGYAV-PGQAGGAGASSSQGGSCC 209
>gi|149212752|gb|ABR22619.1| GTP-binding protein [Lolium temulentum]
Length = 210
Score = 354 bits (909), Expect = 1e-95, Method: Compositional matrix adjust.
Identities = 171/211 (81%), Positives = 184/211 (87%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID +PI+LQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIELQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKENGLLF+EASA+TA NVEE F+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSFEEGEQFAKENGLLFMEASAKTAHNVEEGFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVG+ G S G+ SQ GGCCS
Sbjct: 181 ESFGIKVGHDT-SGQSRGAGGSPSQGGGCCS 210
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 353 bits (907), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 183/211 (86%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLAHRRAVS EEGEQFAKE+GL+F+E SA+TAQNVEEAFI TA+KI Q I+EG D N
Sbjct: 121 ADLAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQKIEEGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ SGIK+G P D + Q GGCCS
Sbjct: 181 EASGIKIGVLPNH-PGHRGDSSGPQSGGCCS 210
>gi|302846433|ref|XP_002954753.1| RabB/Rab2 [Volvox carteri f. nagariensis]
gi|549811|sp|P36863.1|YPTV4_VOLCA RecName: Full=GTP-binding protein yptV4; AltName: Full=RAB2 homolog
gi|409166|gb|AAA34253.1| GTP-binding protein [Volvox carteri]
gi|300259936|gb|EFJ44159.1| RabB/Rab2 [Volvox carteri f. nagariensis]
Length = 213
Score = 353 bits (905), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 168/213 (78%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQ-GPSGAR--DGTVSQRGGCC 210
+ GIKVGYG G GP A+ +G + CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213
>gi|159473897|ref|XP_001695070.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158276449|gb|EDP02222.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 213
Score = 351 bits (901), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 167/213 (78%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQ-GPSGAR--DGTVSQRGGCC 210
+ GIKVGYG G GP + +G ++ CC
Sbjct: 181 ESYGIKVGYGAGNAGPQTVKPGEGGAAKSSSCC 213
>gi|168061692|ref|XP_001782821.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162665723|gb|EDQ52398.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 170/212 (80%), Positives = 181/212 (85%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+E SA+TA NVE+AFI TAAKI Q I+EG D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS--QRGGCC 210
+ GIKVGYG G + QR CC
Sbjct: 181 ESYGIKVGYGGTASAGTGATGGGAAVQRSACC 212
>gi|2500074|sp|Q39570.1|YPTC4_CHLRE RecName: Full=GTP-binding protein YPTC4
gi|806722|gb|AAA82726.1| YptC4 [Chlamydomonas reinhardtii]
Length = 213
Score = 350 bits (899), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 167/213 (78%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQ-GPSGAR--DGTVSQRGGCC 210
+ GIKVGYG G GP + +G ++ CC
Sbjct: 181 ESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
>gi|357149828|ref|XP_003575246.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 210
Score = 349 bits (896), Expect = 3e-94, Method: Compositional matrix adjust.
Identities = 162/190 (85%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKENGL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKENGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>gi|168022844|ref|XP_001763949.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162684954|gb|EDQ71353.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 349 bits (895), Expect = 4e-94, Method: Compositional matrix adjust.
Identities = 170/212 (80%), Positives = 182/212 (85%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI+ +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIENKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKENGL+F+E SA+TA NVE+AFI TAAKI Q I+EG D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS--QRGGCC 210
+ GIKVGYG G G + QR CC
Sbjct: 181 ETYGIKVGYGGTAGAGTGAAGGGTAVQRSACC 212
>gi|168049241|ref|XP_001777072.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671515|gb|EDQ58065.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 213
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 169/212 (79%), Positives = 181/212 (85%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGE+FAKENGL+F+E SA+TA NVE+AFI TAAKI Q I+EG D N
Sbjct: 121 CDLAHRRAVSTEEGERFAKENGLVFMETSAKTAHNVEDAFINTAAKIYQKIEEGIFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS--QRGGCC 210
+ GIKVGYG G + QR CC
Sbjct: 181 ESYGIKVGYGGTASAGAGAAGGSTTVQRSACC 212
>gi|163838698|ref|NP_001106234.1| ras-related protein Rab-2-B [Zea mays]
gi|1346957|sp|P49104.1|RAB2B_MAIZE RecName: Full=Ras-related protein Rab-2-B
gi|722328|gb|AAA63902.1| GTP binding protein [Zea mays]
gi|195647894|gb|ACG43415.1| ras-related protein Rab-2-A [Zea mays]
gi|224031795|gb|ACN34973.1| unknown [Zea mays]
gi|413918614|gb|AFW58546.1| ras protein Rab-2-B [Zea mays]
Length = 210
Score = 348 bits (892), Expect = 9e-94, Method: Compositional matrix adjust.
Identities = 162/190 (85%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>gi|242073412|ref|XP_002446642.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
gi|241937825|gb|EES10970.1| hypothetical protein SORBIDRAFT_06g019620 [Sorghum bicolor]
Length = 210
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGY 189
+ GIKVGY
Sbjct: 181 ESYGIKVGY 189
>gi|195605404|gb|ACG24532.1| ras-related protein Rab-2-A [Zea mays]
gi|223973609|gb|ACN30992.1| unknown [Zea mays]
Length = 209
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGY 189
+ GIKVGY
Sbjct: 181 ESYGIKVGY 189
>gi|89027976|gb|ABD59354.1| small GTP binding protein Rab2A [Saccharum officinarum]
gi|89027978|gb|ABD59355.1| small GTP binding protein Rab2A [Saccharum officinarum]
Length = 210
Score = 347 bits (891), Expect = 1e-93, Method: Compositional matrix adjust.
Identities = 162/189 (85%), Positives = 175/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGY 189
+ GIKVGY
Sbjct: 181 ESYGIKVGY 189
>gi|4837727|gb|AAD30658.1|AF083256_1 small GTP binding protein Rab2 [Sporobolus stapfianus]
Length = 210
Score = 347 bits (891), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 176/189 (93%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 DQSGIKVGY 189
+ +GIKVGY
Sbjct: 181 ESNGIKVGY 189
>gi|115446975|ref|NP_001047267.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|46806275|dbj|BAD17483.1| putative GTP-binding protein yptm3 [Oryza sativa Japonica Group]
gi|113536798|dbj|BAF09181.1| Os02g0586400 [Oryza sativa Japonica Group]
gi|125540069|gb|EAY86464.1| hypothetical protein OsI_07846 [Oryza sativa Indica Group]
gi|125582673|gb|EAZ23604.1| hypothetical protein OsJ_07304 [Oryza sativa Japonica Group]
gi|215686464|dbj|BAG87725.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215712319|dbj|BAG94446.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 347 bits (890), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>gi|162461422|ref|NP_001105743.1| ras-like [Zea mays]
gi|2764802|emb|CAA54822.1| yptm3 [Zea mays]
gi|413922837|gb|AFW62769.1| ras protein Rab-2-A [Zea mays]
Length = 210
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 176/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 DQSGIKVGYG 190
+ +GIKVGY
Sbjct: 181 ESNGIKVGYA 190
>gi|242062134|ref|XP_002452356.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
gi|241932187|gb|EES05332.1| hypothetical protein SORBIDRAFT_04g024320 [Sorghum bicolor]
Length = 210
Score = 347 bits (889), Expect = 2e-93, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 176/189 (93%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 DQSGIKVGY 189
+ +GIKVGY
Sbjct: 181 ESNGIKVGY 189
>gi|326528385|dbj|BAJ93381.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 347 bits (889), Expect = 3e-93, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>gi|38524287|emb|CAD57744.1| RAB-like small G-protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 163/207 (78%), Positives = 179/207 (86%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EE EQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEVEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRG 207
+ GIKVGY G +S +G
Sbjct: 181 ESYGIKVGYAVPNASGGGAGLVLSNQG 207
>gi|326527045|dbj|BAK04464.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 210
Score = 346 bits (887), Expect = 4e-93, Method: Compositional matrix adjust.
Identities = 161/190 (84%), Positives = 174/190 (91%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKENGL+F+EASA+TAQNVEE F+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSFEEGEQFAKENGLIFMEASAKTAQNVEEGFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>gi|162460944|ref|NP_001106078.1| ras-related protein Rab-2-A [Zea mays]
gi|1346956|sp|P49103.1|RAB2A_MAIZE RecName: Full=Ras-related protein Rab-2-A
gi|722326|gb|AAA63901.1| GTP binding protein [Zea mays]
gi|414586805|tpg|DAA37376.1| TPA: ras protein Rab-2-A [Zea mays]
Length = 209
Score = 345 bits (886), Expect = 5e-93, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 174/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGY 189
+ GIKVGY
Sbjct: 181 ESYGIKVGY 189
>gi|219363283|ref|NP_001136891.1| uncharacterized protein LOC100217047 [Zea mays]
gi|194697490|gb|ACF82829.1| unknown [Zea mays]
gi|413937511|gb|AFW72062.1| hypothetical protein ZEAMMB73_237423 [Zea mays]
Length = 210
Score = 345 bits (885), Expect = 6e-93, Method: Compositional matrix adjust.
Identities = 160/190 (84%), Positives = 176/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI+ +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIENKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 DQSGIKVGYG 190
+ +GIKVGY
Sbjct: 181 ESNGIKVGYA 190
>gi|195618502|gb|ACG31081.1| ras-related protein Rab-2-A [Zea mays]
Length = 210
Score = 344 bits (882), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 160/190 (84%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRVAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 DQSGIKVGYG 190
+ +GIKVGY
Sbjct: 181 ESNGIKVGYA 190
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 170/213 (79%), Positives = 186/213 (87%), Gaps = 2/213 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYI+IGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI +PIKLQIW
Sbjct: 1 MSYAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIGNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQHANSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAVS EEG QFAKE+GL+F+E SA+TAQNVEEAFI TAAKI Q I+EG D N
Sbjct: 121 CDLDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQKIEEGIFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGA--RDGTVSQRGGCCS 211
+ SGIKVGYG G G +G+ D T Q GCC+
Sbjct: 181 ETSGIKVGYGGGAGTAGSVRNDYTAPQSSGCCN 213
>gi|115458896|ref|NP_001053048.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|38344743|emb|CAE03047.2| OSJNBa0089K21.1 [Oryza sativa Japonica Group]
gi|113564619|dbj|BAF14962.1| Os04g0470100 [Oryza sativa Japonica Group]
gi|116310017|emb|CAH67042.1| OSIGBa0124N08.4 [Oryza sativa Indica Group]
gi|125548663|gb|EAY94485.1| hypothetical protein OsI_16256 [Oryza sativa Indica Group]
gi|215765437|dbj|BAG87134.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222629030|gb|EEE61162.1| hypothetical protein OsJ_15130 [Oryza sativa Japonica Group]
Length = 211
Score = 343 bits (881), Expect = 2e-92, Method: Compositional matrix adjust.
Identities = 159/189 (84%), Positives = 175/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+T+D RP+KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITVDSRPVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 SDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDLSN 180
Query: 181 DQSGIKVGY 189
+ +GIK+GY
Sbjct: 181 EANGIKLGY 189
>gi|297835774|ref|XP_002885769.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297331609|gb|EFH62028.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 212
Score = 339 bits (870), Expect = 3e-91, Method: Compositional matrix adjust.
Identities = 160/211 (75%), Positives = 182/211 (86%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGK+CLLLQFTDKRFQPVHDLTIG FG RMVT+DGR IKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKTCLLLQFTDKRFQPVHDLTIGAGFGDRMVTVDGRSIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP-NMSIMLVGN 119
DTAGQE+FRSITRS+YRGAAGALLVYDI+RRETFNH++SWLED R +A+ NMSI+L+GN
Sbjct: 61 DTAGQETFRSITRSFYRGAAGALLVYDISRRETFNHVASWLEDVRHYASTHNMSIILIGN 120
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
KC L +RA+SKEEGE+FAK++GLLFLE SART+QNVEEAFIKTAA IL+ I+ G D
Sbjct: 121 KCVLVRKRAISKEEGEEFAKQHGLLFLETSARTSQNVEEAFIKTAANILEKIENGVFDVS 180
Query: 180 NDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
N+ GIKVGY G +G R GT+SQ GGCC
Sbjct: 181 NESPGIKVGYSHPHGEAGGRYGTISQGGGCC 211
>gi|642121|gb|AAA61831.1| small GTP-binding protein [Oryza sativa Indica Group]
Length = 223
Score = 338 bits (868), Expect = 6e-91, Method: Compositional matrix adjust.
Identities = 157/188 (83%), Positives = 171/188 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQGGVFDVSN 180
Query: 181 DQSGIKVG 188
+ G K+
Sbjct: 181 ESYGSKLA 188
>gi|294463840|gb|ADE77443.1| unknown [Picea sitchensis]
Length = 234
Score = 335 bits (860), Expect = 6e-90, Method: Compositional matrix adjust.
Identities = 163/234 (69%), Positives = 181/234 (77%), Gaps = 23/234 (9%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIRNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITR----------------------RETFNHLS 98
DTAGQESFRSITRSYYRGAAGALLVYDITR RETF HLS
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRCQLAFMYMIKTEGSRYHFIIKQRETFTHLS 120
Query: 99 SWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158
+WLEDARQHA+PNM+IML+GNKCDLAHRRAV+ EEG QFAKENGL+FLE SA+T+QNVEE
Sbjct: 121 TWLEDARQHASPNMTIMLIGNKCDLAHRRAVTTEEGAQFAKENGLIFLETSAKTSQNVEE 180
Query: 159 AFIKTAAKILQNIQEGALDAVNDQSGIKV-GYGRGQGPSGARDGTVSQRGGCCS 211
AFI TAAK+ Q I+EG LD N+ GIKV R+ +++ + CCS
Sbjct: 181 AFINTAAKVYQKIEEGILDVSNESLGIKVGYGAGTGAAGSTRNDSIASQSSCCS 234
>gi|413922836|gb|AFW62768.1| hypothetical protein ZEAMMB73_212646, partial [Zea mays]
Length = 194
Score = 335 bits (858), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 155/181 (85%), Positives = 169/181 (93%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 180
Query: 181 D 181
+
Sbjct: 181 E 181
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 334 bits (857), Expect = 1e-89, Method: Compositional matrix adjust.
Identities = 159/210 (75%), Positives = 176/210 (83%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQ+GA D N
Sbjct: 121 SDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGAFDINN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G PS + Q GGCC
Sbjct: 181 EANGIKLGPQNPSNPSTSVPDRPPQSGGCC 210
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 333 bits (855), Expect = 2e-89, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 169/187 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAV+ EEGEQFAKE+GL+FLE SA+TA NVEEAFI TA KI + I++G D N
Sbjct: 121 SDLTHRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYEKIEQGVFDVSN 180
Query: 181 DQSGIKV 187
+ GIKV
Sbjct: 181 ESYGIKV 187
>gi|348684558|gb|EGZ24373.1| hypothetical protein PHYSODRAFT_483962 [Phytophthora sojae]
Length = 210
Score = 333 bits (853), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/210 (75%), Positives = 175/210 (83%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+ + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+ARQ++N NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS +EGEQFAKENGL+FLE SA+TA NVE+AF+KTA+KI NIQ G D N
Sbjct: 121 SDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVG GP G + GCC
Sbjct: 181 EAHGIKVGMTGSPGPGGFGNSNPPANRGCC 210
>gi|301105767|ref|XP_002901967.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262099305|gb|EEY57357.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 210
Score = 332 bits (852), Expect = 4e-89, Method: Compositional matrix adjust.
Identities = 158/210 (75%), Positives = 175/210 (83%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+ + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIENKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+ARQ++N NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMAIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS +EGEQFAKENGL+FLE SA+TA NVE+AF+KTA+KI NIQ G D N
Sbjct: 121 SDLEHRRAVSFKEGEQFAKENGLIFLETSAKTAANVEDAFVKTASKIYSNIQSGVCDVTN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVG GP G + GCC
Sbjct: 181 EAHGIKVGMTGSPGPGGFGNSNPPASRGCC 210
>gi|428186007|gb|EKX54858.1| hypothetical protein GUITHDRAFT_149882 [Guillardia theta CCMP2712]
Length = 207
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 157/210 (74%), Positives = 175/210 (83%), Gaps = 3/210 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR +TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARRITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAV+ EGE FA+ENGL+FLE SA+TA NVEEAF+ TA +I IQEG D N
Sbjct: 121 SDLEHRRAVTYAEGEAFARENGLIFLETSAKTAHNVEEAFVNTAKQIYAKIQEGVFDVTN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GI+VG P+ G ++GGCC
Sbjct: 181 ESFGIRVGV---TSPNQGSGGDGQRKGGCC 207
>gi|325181703|emb|CCA16157.1| Rab2 family GTPase putative [Albugo laibachii Nc14]
Length = 586
Score = 329 bits (844), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 153/210 (72%), Positives = 175/210 (83%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+ + IKLQIW
Sbjct: 377 MSYAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIESKQIKLQIW 436
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ARQ+AN NM+IML+GNK
Sbjct: 437 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTLWLKEARQNANANMAIMLIGNK 496
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D+ HRRAV+ +EGEQFAK+NGL+FLE SA+TA NVE+AF++TA+KI +NIQ G D N
Sbjct: 497 TDVEHRRAVTYKEGEQFAKDNGLIFLETSAKTASNVEDAFVETASKIYRNIQNGVCDVTN 556
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVG G QR GCC
Sbjct: 557 EAHGIKVGMSGAGGTGSIGSAAQHQRSGCC 586
>gi|307110175|gb|EFN58411.1| GTP-binding protein YPTC4 [Chlorella variabilis]
Length = 217
Score = 327 bits (837), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 156/187 (83%), Positives = 165/187 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF HL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS EEGEQFAKE+GL+FLE SA+TA NVEEAFI TA I IQ G D N
Sbjct: 121 ADLGHRRAVSTEEGEQFAKEHGLVFLETSAKTALNVEEAFINTARAIHGKIQSGVFDVSN 180
Query: 181 DQSGIKV 187
+ GIKV
Sbjct: 181 ESYGIKV 187
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 327 bits (837), Expect = 3e-87, Method: Compositional matrix adjust.
Identities = 158/212 (74%), Positives = 177/212 (83%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQEG D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTAKEIYQKIQEGVFDINN 180
Query: 181 DQSGIKVGYGR-GQGPSGARDGTVSQR-GGCC 210
+ +GIK+G PS G +Q+ GGCC
Sbjct: 181 EANGIKIGPQHTSSSPSTISGGAANQQSGGCC 212
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 160/215 (74%), Positives = 179/215 (83%), Gaps = 7/215 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGPS-GARDGTVSQRG----GCC 210
+ +GIK+ G+ P+ A GT SQ G GCC
Sbjct: 181 EANGIKI--GQQHSPTYPALPGTGSQAGSASSGCC 213
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 157/214 (73%), Positives = 176/214 (82%), Gaps = 6/214 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G PSG + SQ G CC
Sbjct: 181 EANGIKLGPQHLPSNANTPSGG--ASASQGGACC 212
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 324 bits (831), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/219 (72%), Positives = 174/219 (79%), Gaps = 15/219 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG---------YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G G G P G GCC
Sbjct: 181 EANGIKIGQQHSPTSPSLGSGNSPGGPAS------SGCC 213
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 324 bits (830), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/219 (72%), Positives = 174/219 (79%), Gaps = 15/219 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG---------YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G G G P G GCC
Sbjct: 181 EANGIKIGQQHSPTNPSLGSGNNPGG------QSSSGCC 213
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+ENGL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFARENGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 157/215 (73%), Positives = 177/215 (82%), Gaps = 8/215 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQ-----RGGCC 210
+ +GIK+G Q P+ + SQ GGCC
Sbjct: 181 EANGIKIG---PQHPTTNSTLSSSQGGHQAGGGCC 212
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 323 bits (827), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 176/215 (81%), Gaps = 8/215 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGPS-----GARDGTVSQRGGCC 210
+ +GIK+G Q P+ + G GGCC
Sbjct: 181 EANGIKIG---PQHPTTNSTLSSNQGGHQAGGGCC 212
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 159/215 (73%), Positives = 176/215 (81%), Gaps = 7/215 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG-YGRGQGP----SGARDGTVSQRGGCC 210
+ +GIK+G P SG G V+ GCC
Sbjct: 181 EANGIKIGQQATPTNPALPGSGGAGGAVNS--GCC 213
>gi|255071631|ref|XP_002499490.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
gi|226514752|gb|ACO60748.1| ras-related gtp-binding rab2-like protein [Micromonas sp. RCC299]
Length = 220
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 157/201 (78%), Positives = 176/201 (87%), Gaps = 3/201 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQ VHDLTIGVEFG+RMV+I+ R IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRMVSINDRQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF HLSSWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLSSWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D+AH+R VS+EEGE+FA+E+GL+FLE SA+T+ NVEEAFI TA+ I + I +G LD N
Sbjct: 121 SDVAHKRQVSREEGEEFAREHGLVFLETSAKTSDNVEEAFINTASVICEKIDDG-LDVSN 179
Query: 181 DQSGIKVGYGRGQGPSGARDG 201
+ GIKVGY G G +GA G
Sbjct: 180 ESHGIKVGY--GAGGTGANQG 198
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 322 bits (826), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 158/216 (73%), Positives = 179/216 (82%), Gaps = 10/216 (4%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGP------SGARDGTVSQRGGCC 210
+ +GIK+G Q P SG++ G + GGCC
Sbjct: 181 EANGIKIG---PQHPTTNSTLSGSQGGQHAG-GGCC 212
>gi|395546064|ref|XP_003774914.1| PREDICTED: ras-related protein Rab-2A-like [Sarcophilus harrisii]
Length = 212
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 158/212 (74%), Positives = 176/212 (83%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR+V+IDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVSIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQHAN NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHANANMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR VSKEEGE FA+E+GL+F+E SA+TA NVE+AFI TA I + IQEG D N
Sbjct: 121 SDLDIRREVSKEEGEAFAQEHGLIFMETSAKTAVNVEDAFISTARGIYEKIQEGIFDMSN 180
Query: 181 DQSGIKVGYGR-GQGPSGA-RDGTVSQRGGCC 210
+ SGIK+G G P+ A G GGCC
Sbjct: 181 ETSGIKIGPQHVGAAPTHAGNQGVPRSGGGCC 212
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 322 bits (824), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 322 bits (824), Expect = 9e-86, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 321 bits (823), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG--YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G+ G GGCC
Sbjct: 181 EANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 321 bits (822), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 321 bits (822), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLMFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 174/216 (80%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVGYGR------GQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G S G V GCC
Sbjct: 181 EANGIKIGPQQCISTSVGSSASQRNSGDVESNSGCC 216
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/192 (78%), Positives = 168/192 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRG 192
+ +GIK+G G
Sbjct: 181 EANGIKIGPQHG 192
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQ+G D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|54696256|gb|AAV38500.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368765|gb|AAX43233.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 320 bits (820), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEFRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|402875596|ref|XP_003901586.1| PREDICTED: ras-related protein Rab-2B [Papio anubis]
gi|355693102|gb|EHH27705.1| hypothetical protein EGK_17973 [Macaca mulatta]
gi|355778380|gb|EHH63416.1| hypothetical protein EGM_16382 [Macaca fascicularis]
gi|380817346|gb|AFE80547.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|383422287|gb|AFH34357.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|384949918|gb|AFI38564.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
Length = 216
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + V GCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDVGSNSGCC 216
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 152/211 (72%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI+ + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVE+AFI TA +I IQ+G D N
Sbjct: 121 SDLEGRREVKKEEGEAFAQEHGLVFMETSAKTADNVEDAFINTAKEIYDKIQDGVFDINN 180
Query: 181 DQSGIKVGYGRGQ-GPSGARDGTVSQRGGCC 210
+ +GIK+G + P G +Q GGCC
Sbjct: 181 EANGIKIGPQQANTSPGGGNPSGNTQSGGCC 211
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVE+AFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEKAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG--YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G+ G GGCC
Sbjct: 181 EANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQ+G D N
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 181 EANGIKIGPQQCISTSVGPSASQRSSSEIGSNSGCC 216
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 173/216 (80%), Gaps = 8/216 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV+ID + IKLQIWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVSIDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDAR H+NPNM I+L+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARSHSNPNMVIILIGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV++EEGEQFA+ENGL+F+E SA+ A NVEEAFI+TA I IQE D N+
Sbjct: 124 LDSKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDIKNEM 183
Query: 183 SGIKVGYGRGQGPSGAR--------DGTVSQRGGCC 210
+GIKVG G R T S+ GGCC
Sbjct: 184 NGIKVGPQLAGGAGSTRLDLRAPQQKPTNSEGGGCC 219
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLT+GVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 178/212 (83%), Gaps = 3/212 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WL+DARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLDDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA VEEAFI TA +I + IQEGA D N
Sbjct: 121 SDLESRREVKREEGEAFAREHGLVFMETSAKTAAGVEEAFINTAREIYEKIQEGAFDINN 180
Query: 181 DQSGIKVG--YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G G +R G +Q GGCC
Sbjct: 181 EANGIKLGPQHQSGAGMPNSR-GQQNQGGGCC 211
>gi|291399649|ref|XP_002716214.1| PREDICTED: RAB2A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 212
Score = 319 bits (818), Expect = 4e-85, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALL YDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLAYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|21361884|ref|NP_116235.2| ras-related protein Rab-2B isoform 1 [Homo sapiens]
gi|296214433|ref|XP_002753820.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Callithrix
jacchus]
gi|332223471|ref|XP_003260896.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Nomascus
leucogenys]
gi|332841820|ref|XP_003314293.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Pan troglodytes]
gi|397466079|ref|XP_003804800.1| PREDICTED: ras-related protein Rab-2B [Pan paniscus]
gi|426376304|ref|XP_004054944.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Gorilla gorilla
gorilla]
gi|28436385|sp|Q8WUD1.1|RAB2B_HUMAN RecName: Full=Ras-related protein Rab-2B
gi|18088786|gb|AAH20839.1| RAB2B, member RAS oncogene family [Homo sapiens]
gi|119586786|gb|EAW66382.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119586787|gb|EAW66383.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123993135|gb|ABM84169.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|124000125|gb|ABM87571.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|189067491|dbj|BAG37750.1| unnamed protein product [Homo sapiens]
gi|410220922|gb|JAA07680.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220924|gb|JAA07681.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220926|gb|JAA07682.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220928|gb|JAA07683.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220930|gb|JAA07684.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410268158|gb|JAA22045.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410328337|gb|JAA33115.1| RAB2B, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 154/215 (71%), Positives = 176/215 (81%), Gaps = 5/215 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVGYGRGQ----GPSGA-RDGTVSQRGGCC 210
+ +GIK+G + GPS R+ ++ CC
Sbjct: 181 EANGIKIGPQQSTSTSVGPSSCQRNRDIASSSSCC 215
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 319 bits (817), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 172/212 (81%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRG--GCC 210
+ +GIK+G + G + G CC
Sbjct: 181 EANGIKLGPQHSPSSPNSPGGNPALSGSSNCC 212
>gi|311261052|ref|XP_003128612.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Sus scrofa]
Length = 216
Score = 319 bits (817), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ T + GCC
Sbjct: 181 EANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC 216
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEARREVKREEGEAFAREHGLVFMETSAKTANNVEEAFIDTAKEIYRKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGV+FGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVKFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+ NK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIANK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 156/218 (71%), Positives = 175/218 (80%), Gaps = 10/218 (4%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG--------YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G G G P +RD GCC
Sbjct: 181 EANGIKIGPQQSIATSAGPGACPRNSRD--TGSDSGCC 216
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIHRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WL+DARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLDDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 181 EANGIKIGPQQCISASVGPSASQRSSNEIGSNSGCC 216
>gi|156555012|ref|XP_001603108.1| PREDICTED: ras-related protein Rab-2-like [Nasonia vitripennis]
Length = 214
Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|395861634|ref|XP_003803086.1| PREDICTED: ras-related protein Rab-2B [Otolemur garnettii]
Length = 216
Score = 318 bits (816), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 157/218 (72%), Positives = 176/218 (80%), Gaps = 10/218 (4%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPS----GARDGTVSQRGGCC 210
+ +GIK+G GPS RD V+ GCC
Sbjct: 181 EANGIKIGPQQSISTSLGPSVSQRNCRD--VASNSGCC 216
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 151/188 (80%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKY IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL+SWL+DARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLDDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEIKREVKKEEGEAFAREHGLIFMETSAKTATNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|300798691|ref|NP_001179594.1| ras-related protein Rab-2B [Bos taurus]
gi|426232812|ref|XP_004010414.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Ovis aries]
gi|296483460|tpg|DAA25575.1| TPA: RAB2B protein-like [Bos taurus]
gi|440902097|gb|ELR52940.1| Ras-related protein Rab-2B [Bos grunniens mutus]
Length = 216
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 155/216 (71%), Positives = 177/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ G+ + GCC
Sbjct: 181 EANGIKIGPQQCISTPVGPSASQRGSHDMGADSGCC 216
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|156371397|ref|XP_001628750.1| predicted protein [Nematostella vectensis]
gi|156215735|gb|EDO36687.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 318 bits (814), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQEG D N
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 173/212 (81%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRG--GCC 210
+ +GIK+G + G + G GCC
Sbjct: 181 EANGIKLGPQHSPSSPNSPSGNQALGGPNGCC 212
>gi|402587368|gb|EJW81303.1| hypothetical protein WUBG_07788 [Wuchereria bancrofti]
Length = 212
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLASWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVGYGR------GQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G S V GCC
Sbjct: 181 EANGIKIGPQQCISTSVGSSTSQRNSREVGSNSGCC 216
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 168/188 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF+HL+SWLEDARQH++ NM I+L+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQHSSSNMVIILIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR VS+EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVSREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEIYKKIQQGLFDVNN 180
Query: 181 DQSGIKVG 188
+ +GIKVG
Sbjct: 181 EANGIKVG 188
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 317 bits (811), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GP+ ++ + V GCC
Sbjct: 181 EANGIKIGPQQSISTSAGPNSSQRNSCDVGPDSGCC 216
>gi|323445864|gb|EGB02268.1| hypothetical protein AURANDRAFT_35409 [Aureococcus anophagefferens]
Length = 210
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/210 (70%), Positives = 169/210 (80%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQ +H+LTIGVEFGARMV ID R IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARMVAIDERQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+ARQ++N NM +ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTRWLEEARQNSNSNMVVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS +EGE+FA++NGL+F+E SA+T+ NVE AFI TA+ I +NI G D N
Sbjct: 121 SDLGHRRAVSTDEGEEFARKNGLVFMETSAKTSSNVERAFIDTASTIHENITAGVFDVTN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVG + P+ + CC
Sbjct: 181 ESLGIKVGVASSELPNSSSTAGSYAHKNCC 210
>gi|83415090|ref|NP_001032734.1| ras-related protein Rab-2B [Rattus norvegicus]
gi|77567746|gb|AAI07444.1| RAB2B, member RAS oncogene family [Rattus norvegicus]
gi|149033676|gb|EDL88474.1| rCG61209, isoform CRA_a [Rattus norvegicus]
gi|149033677|gb|EDL88475.1| rCG61209, isoform CRA_a [Rattus norvegicus]
Length = 215
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 153/215 (71%), Positives = 174/215 (80%), Gaps = 5/215 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA+I TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIHRKIQQGLFDVHN 180
Query: 181 DQSGIKVGYGR-----GQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G PS + GCC
Sbjct: 181 EANGIKIGPQQSISLVGPCPSQQNSSDIGPDSGCC 215
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 168/188 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF+HL+SWLEDARQH++ NM I+L+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTSWLEDARQHSSSNMVIILIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR VS+EEGE FA+E+GL+F+E SA+T+ NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVSREEGEAFAREHGLIFMETSAKTSANVEEAFIDTAKEIYKKIQQGLFDVNN 180
Query: 181 DQSGIKVG 188
+ +GIKVG
Sbjct: 181 EANGIKVG 188
>gi|112983258|ref|NP_001037612.1| GTP-binding protein RAB2 [Bombyx mori]
gi|99082890|gb|ABF66620.1| GTP-binding protein RAB2 [Bombyx mori]
Length = 214
Score = 316 bits (810), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRF+PVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DT GQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTGGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 316 bits (809), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/187 (80%), Positives = 166/187 (88%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDG+ IKLQIWD
Sbjct: 1 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGKQIKLQIWD 60
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+SWLEDARQH+N NM IML+GNK
Sbjct: 61 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTSWLEDARQHSNSNMVIMLIGNKS 120
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+
Sbjct: 121 DLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEIYRKIQEGVFDINNE 180
Query: 182 QSGIKVG 188
+GIK+G
Sbjct: 181 ANGIKLG 187
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 316 bits (809), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQEG D N
Sbjct: 121 SDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 315 bits (808), Expect = 5e-84, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 171/203 (84%), Gaps = 4/203 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGAR 199
+ +GIK+G GPS ++
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQ 203
>gi|193624758|ref|XP_001951908.1| PREDICTED: ras-related protein Rab-2A-like [Acyrthosiphon pisum]
Length = 211
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/194 (75%), Positives = 168/194 (86%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR+VTI+ +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLVTIETKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V KEEGE FA+E+GL+F+E SA+T+ NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLEAKREVKKEEGEAFAREHGLVFMETSAKTSDNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRGQG 194
+ +GIK+G G
Sbjct: 181 EANGIKIGPQHSTG 194
>gi|355714890|gb|AES05151.1| RAB2B, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 6 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 65
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 66 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 125
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 126 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 185
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 186 EANGIKIG 193
>gi|15235980|ref|NP_193449.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
gi|75318151|sp|O23561.1|RAB1A_ARATH RecName: Full=Ras-related protein RABB1a; Short=AtRABB1a; AltName:
Full=Ras-related protein Rab2B; Short=AtRab2B
gi|2245075|emb|CAB10497.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|7268467|emb|CAB80987.1| GTP-binding RAB2A like protein [Arabidopsis thaliana]
gi|67633750|gb|AAY78799.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332658456|gb|AEE83856.1| RAB GTPase homolog B1A [Arabidopsis thaliana]
Length = 205
Score = 315 bits (807), Expect = 7e-84, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 174/211 (82%), Gaps = 8/211 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIW
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL+SWLE+ARQHA+ NM+ ML+GNK
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQ+G +D N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS-QRGGCC 210
+ G GP G +D + S QR GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 315 bits (807), Expect = 8e-84, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|328874448|gb|EGG22813.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 210
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 151/209 (72%), Positives = 172/209 (82%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+AGALLVYDITRRETFNHL+ WL+DA+ ANPNM+I+L+GNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRETFNHLTCWLKDAKSFANPNMTIILIGNKSD 121
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV+ EEGEQFA+ENGL+FLE SA+TA NVE+AFI+TA +I IQ G D N+
Sbjct: 122 LEQKRAVAYEEGEQFARENGLIFLETSAKTAANVEDAFIRTAKEIYNKIQTGDFDINNET 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQR-GGCC 210
GIK+ G Q G +Q GGCC
Sbjct: 182 FGIKL--GAPQKADATNTGNQNQSTGGCC 208
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 315 bits (806), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 174/210 (82%), Gaps = 7/210 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+AGALLVYDITRR+TFNHL+ WL+DAR +AN NM+I+L+GNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSD 121
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ +RAVS EEG QFA ENGL+FLE SA+TA NVEEAF+ TA+KI + IQ+G D N+
Sbjct: 122 MESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNES 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQR--GGCC 210
GIK+G P+ +DGT + GGCC
Sbjct: 182 FGIKLG-----APTSKQDGTDQKPAGGGCC 206
>gi|312382073|gb|EFR27648.1| hypothetical protein AND_05520 [Anopheles darlingi]
Length = 182
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/181 (81%), Positives = 161/181 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 D 181
+
Sbjct: 181 E 181
>gi|298709147|emb|CBJ31092.1| Rab2A, RAB family GTPase [Ectocarpus siliculosus]
Length = 208
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 164/188 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM++ID R +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNRQMKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+ WLE+ARQ++N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEARQNSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RRAV+ +EGEQFA+ENGL+FLE SA+ A NVE AFIKTAAKI NI G D N
Sbjct: 121 SDLTSRRAVTTKEGEQFAEENGLIFLETSAKMATNVETAFIKTAAKIYDNILSGVYDPTN 180
Query: 181 DQSGIKVG 188
+ GIK+G
Sbjct: 181 EAHGIKLG 188
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/181 (81%), Positives = 161/181 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 D 181
+
Sbjct: 181 E 181
>gi|300122550|emb|CBK23119.2| unnamed protein product [Blastocystis hominis]
Length = 211
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 169/211 (80%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIGENQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF L+ WL +AR++ + NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFTQLTKWLTEARENGSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRR VS EEGE+FA+ENGL+FLE SA+TA NVEEAF+KTA KI NI+ G +D N
Sbjct: 121 SDLNHRRTVSTEEGEKFAEENGLIFLETSAKTAANVEEAFVKTAEKIYHNIETGVIDVSN 180
Query: 181 DQSGIKVGYGRG-QGPSGARDGTVSQRGGCC 210
+ +G+KVG +G G +GGCC
Sbjct: 181 ESNGVKVGQSDAVKGLQAPNAGAGQAQGGCC 211
>gi|413922835|gb|AFW62767.1| hypothetical protein ZEAMMB73_212646 [Zea mays]
Length = 199
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/190 (78%), Positives = 165/190 (86%), Gaps = 11/190 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFT IGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFT-----------IGVEFGARMITIDNKPIKLQIW 49
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM++ML+GNK
Sbjct: 50 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTVMLIGNK 109
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTA I + IQ+G D N
Sbjct: 110 CDLSHRRAVSYEEGEQFAKEHGLVFMEASAKTAQNVEEAFIKTAGTIYKKIQDGIFDVSN 169
Query: 181 DQSGIKVGYG 190
+ +GIKVGY
Sbjct: 170 ESNGIKVGYA 179
>gi|330841005|ref|XP_003292496.1| Rab GTPase [Dictyostelium purpureum]
gi|325077244|gb|EGC30969.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 175/210 (83%), Gaps = 7/210 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIWDT
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKQIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+AGALLVYDITRR+TFNHL+ WL+DAR +AN NM+I+L+GNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSD 121
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ +RAVS EEG+QFA+ENGL+FLE SA+TA NVEEAF+ TA KI + IQ+G D N+
Sbjct: 122 MESKRAVSYEEGKQFAEENGLIFLETSAKTASNVEEAFVNTAGKIYEKIQKGDFDINNES 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQR--GGCC 210
GIK+G P +DG +++ GGCC
Sbjct: 182 FGIKLG-----APQSKQDGQDNKQAAGGCC 206
>gi|30525051|ref|NP_766189.1| ras-related protein Rab-2B [Mus musculus]
gi|28380119|sp|P59279.1|RAB2B_MOUSE RecName: Full=Ras-related protein Rab-2B
gi|26332531|dbj|BAC29983.1| unnamed protein product [Mus musculus]
gi|26336258|dbj|BAC31814.1| unnamed protein product [Mus musculus]
gi|28278529|gb|AAH46334.1| RAB2B, member RAS oncogene family [Mus musculus]
gi|74180601|dbj|BAE35753.1| unnamed protein product [Mus musculus]
gi|74227753|dbj|BAE35713.1| unnamed protein product [Mus musculus]
gi|112292941|dbj|BAF02848.1| Rab2B [Mus musculus]
gi|148710302|gb|EDL42248.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|148710303|gb|EDL42249.1| RAB2B, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 216
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA+I TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GP + + GCC
Sbjct: 181 EANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216
>gi|219123942|ref|XP_002182274.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217406235|gb|EEC46175.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 210
Score = 312 bits (800), Expect = 5e-83, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 169/211 (80%), Gaps = 2/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGRPIKLQI 59
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+++ D +KLQI
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISVADDTQVKLQI 60
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAGQESFRSITRSYYRGAAGALLVYDITRR+TF HLS WLE+A+ HA PNM I+L+GN
Sbjct: 61 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFQHLSRWLEEAKSHAQPNMVILLIGN 120
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
K DL HRRAV+ EEG++FA NGLLFLE SA+TA NVE+AF+KTA I + IQ G +D
Sbjct: 121 KNDLEHRRAVTAEEGQEFADANGLLFLETSAKTAFNVEQAFLKTAKSIHEKIQSGDIDVA 180
Query: 180 NDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
N+ GIKVG + G D T Q CC
Sbjct: 181 NESHGIKVGMAQSNQIPGMSDSTKRQ-NACC 210
>gi|89257641|gb|ABD65128.1| GTP-binding protein RAB2A, putative [Brassica oleracea]
Length = 192
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 143/158 (90%), Positives = 154/158 (97%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +P+KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPLKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158
CDLAHRRAV+ EEGEQFAKE+GL+F+EASA+TAQNVEE
Sbjct: 121 CDLAHRRAVTTEEGEQFAKEHGLIFMEASAKTAQNVEE 158
>gi|12837642|dbj|BAB23894.1| unnamed protein product [Mus musculus]
Length = 216
Score = 311 bits (798), Expect = 7e-83, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA E+GL+F+E SA+TA NVEEA+I TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFALEHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVGYGR----GQGPSGARDGT--VSQRGGCC 210
+ +GIK+G + GP + + GCC
Sbjct: 181 EANGIKIGSQQSITSSVGPCSPQQNVSDIWADSGCC 216
>gi|54311137|gb|AAH33312.1| RAB2B, member RAS oncogene family [Mus musculus]
Length = 216
Score = 311 bits (798), Expect = 8e-83, Method: Compositional matrix adjust.
Identities = 151/216 (69%), Positives = 172/216 (79%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAA ALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAAALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA+I TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GP + + GCC
Sbjct: 181 EANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 311 bits (798), Expect = 9e-83, Method: Compositional matrix adjust.
Identities = 151/214 (70%), Positives = 170/214 (79%), Gaps = 4/214 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+G+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF+HL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFDHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V EEG FAKE+GL+F+E SA+TA NVEEAFI TA +I IQ+G D N
Sbjct: 121 SDLDAKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTAKEIYTKIQDGVFDVNN 180
Query: 181 DQSGIKVGYGRGQG----PSGARDGTVSQRGGCC 210
+ +GIK+G G P G GGCC
Sbjct: 181 EANGIKLGPQHQTGGTVRPGTTEPGKPQGSGGCC 214
>gi|225709940|gb|ACO10816.1| Ras-related protein Rab-2 [Caligus rogercresseyi]
Length = 212
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 165/188 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+G+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I IQEG D N
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYDKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|225714638|gb|ACO13165.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
gi|290562553|gb|ADD38672.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 165/188 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+G+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I IQEG D N
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYDKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|225713134|gb|ACO12413.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 145/188 (77%), Positives = 165/188 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I+G+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIEGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I IQEG D N
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYDKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|323449327|gb|EGB05216.1| hypothetical protein AURANDRAFT_31216 [Aureococcus anophagefferens]
Length = 208
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 169/212 (79%), Gaps = 6/212 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQ +H+LTIGVEFGAR+V ID R +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQAIHELTIGVEFGARLVGIDDRQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYD+TRRETFNHL+ WLE+AR +AN M +ML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDVTRRETFNHLTRWLEEARHNANTEMVVMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS +EG FA NGL+F+E SA+TA+NVE AFI+TA KI +NIQ+G D N
Sbjct: 121 SDLEHRRAVSTKEGADFAARNGLIFMETSAKTARNVEGAFIQTAHKIYENIQKGVYDVTN 180
Query: 181 DQSGIKVGYGRGQGPS--GARDGTVSQRGGCC 210
D GIKVG S GA GT GCC
Sbjct: 181 DSHGIKVGAHSSSAASVPGAASGT----AGCC 208
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 152/215 (70%), Positives = 174/215 (80%), Gaps = 7/215 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR++ IDG+ +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TF HL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVE+AFI TA I IQEGALD N
Sbjct: 121 SDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNN 180
Query: 181 DQSGIKVGYGRGQGPSGA--RDGTVSQR---GGCC 210
+ +GIK+ G P G + ++ R GCC
Sbjct: 181 EANGIKL--GPHHNPVGGVYNNNNMTNRTSGAGCC 213
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 151/213 (70%), Positives = 170/213 (79%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDDKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF HL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFTHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVE+AFI TA I IQEG LD N
Sbjct: 121 SDLESRRDVQKEEGEAFAREHGLIFMETSAKTAANVEDAFIDTAKCIHGKIQEGVLDVNN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQR---GGCC 210
+ +GIK+G + ++ R GCC
Sbjct: 181 EANGIKLGPHHNPVGGAYNNSNLTNRTSGAGCC 213
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 144/188 (76%), Positives = 166/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM++I+G+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIEGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRR+TF+HL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFSHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I IQEG D N
Sbjct: 121 SDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYDKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|290980783|ref|XP_002673111.1| rab family small GTPase [Naegleria gruberi]
gi|284086692|gb|EFC40367.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 309 bits (792), Expect = 4e-82, Method: Compositional matrix adjust.
Identities = 147/211 (69%), Positives = 174/211 (82%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ +KLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF+HL++WLEDAR+H+N M+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFHHLTTWLEDARRHSNSTMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RRAVS EEG++FA+++ L+FLE SA+ +NVEEAF TA I + I++G +D N
Sbjct: 121 CDLDSRRAVSYEEGKKFAQQHDLIFLETSAKNDENVEEAFNYTARIINEKIEKGIIDVTN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
+ +G+KVG + T S+ +G CC
Sbjct: 181 EMNGVKVGNAPTATTNLLEKPTTSEPKGKCC 211
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 309 bits (792), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 146/188 (77%), Positives = 165/188 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR++ IDG+ +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARLINIDGKQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TF HL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVE+AFI TA I IQEGALD N
Sbjct: 121 SDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDKIQEGALDVNN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKLG 188
>gi|145348347|ref|XP_001418612.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578842|gb|ABO96905.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 212
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 147/213 (69%), Positives = 176/213 (82%), Gaps = 4/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYI+IGDTGVGKSCLLLQFTDK FQPVHDLTIGVEFG+RMV++ + +KLQIW
Sbjct: 1 MSYAYLFKYIVIGDTGVGKSCLLLQFTDKTFQPVHDLTIGVEFGSRMVSVASKQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAA ALLVYD+TRRETF++LS+WL+D R HANPNM I LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAAALLVYDVTRRETFDNLSTWLQDCRAHANPNMVITLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D++HRRAVS EEGE FA+ENGLLF+EASA+TA +VE+AFI TA ++++NI G LD +
Sbjct: 121 ADISHRRAVSTEEGEMFARENGLLFVEASAKTADHVEDAFIATAREVVKNIDAG-LDVKD 179
Query: 181 DQSGIKVGYGRGQGPS---GARDGTVSQRGGCC 210
+ +G+K+GY G G S G ++ GCC
Sbjct: 180 ESNGVKLGYVAGGGASDTVGLNAPPRVEQSGCC 212
>gi|294866679|ref|XP_002764808.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
gi|239864555|gb|EEQ97525.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
Length = 212
Score = 308 bits (789), Expect = 9e-82, Method: Compositional matrix adjust.
Identities = 153/218 (70%), Positives = 176/218 (80%), Gaps = 13/218 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRF+P HDLTIGVEFGAR+V +DG+ IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLTIGVEFGARLVNVDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGA GALLVYDI+RR+TFNHL+ WLE+ARQ++NPNM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGATGALLVYDISRRDTFNHLTRWLEEARQNSNPNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RR VS EEG +FAK+N L+FLE SA+TA+NVEEAF++TA KI +NI G D N
Sbjct: 121 CDL-ERREVSYEEGAKFAKDNNLIFLETSAKTARNVEEAFLQTARKIYENILAGVYDLSN 179
Query: 181 DQSGIKVGYGRGQGPSGARD--GTVSQR-----GGCCS 211
+ GIKVG P+ + + SQR GGCCS
Sbjct: 180 ESHGIKVGL-----PASSTNVAELQSQRFTQSQGGCCS 212
>gi|326427375|gb|EGD72945.1| GTP-binding protein yptV1 [Salpingoeca sp. ATCC 50818]
Length = 220
Score = 308 bits (789), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 152/219 (69%), Positives = 173/219 (78%), Gaps = 11/219 (5%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYIIIGD+ VGKSCLLLQFTD RFQ VHDLTIGVEFGARMVTIDG IKLQIWD
Sbjct: 3 SYSYLFKYIIIGDSAVGKSCLLLQFTDHRFQTVHDLTIGVEFGARMVTIDGHQIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRGAAGALLVYDITRRETF HL +WLEDAR H+NPNM I+LVGNK
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVYDITRRETFQHLGTWLEDARAHSNPNMVIILVGNKA 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V +EEGE+FA+E GLLF+E SA+TA NVE+AF TA KI + +Q+G DA N+
Sbjct: 123 DLEDKRQVPREEGERFARERGLLFIETSAKTAMNVEDAFTTTANKIYEKLQQGVFDARNE 182
Query: 182 QSGIKVG--YGRGQGP--------SGARDGTVSQRGGCC 210
+GIK+G Y G P ++ G+ S+ GGCC
Sbjct: 183 LNGIKIGPQYNAGAPPGQKTVDLSKQSKQGS-SEEGGCC 220
>gi|217075558|gb|ACJ86139.1| unknown [Medicago truncatula]
gi|388494336|gb|AFK35234.1| unknown [Medicago truncatula]
Length = 175
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 143/154 (92%), Positives = 151/154 (98%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID RPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMLTIDSRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+I L+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTITLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQ 154
CDL+HRRAVSKEEGEQFAKENGLLF+EASA+T +
Sbjct: 121 CDLSHRRAVSKEEGEQFAKENGLLFMEASAKTTK 154
>gi|147900614|ref|NP_001090137.1| RAB2A, member RAS oncogene family [Xenopus laevis]
gi|83318436|gb|AAI08552.1| MGC131016 protein [Xenopus laevis]
Length = 228
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 148/205 (72%), Positives = 166/205 (80%), Gaps = 17/205 (8%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRS-----------------ITRSYYRGAAGALLVYDITRRETFNHLSSWLED 103
DTAGQESFRS ITRSYYRGAAGALLVYDITRR+TFNHL++WLED
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRSYYRGAAGALLVYDITRRDTFNHLTTWLED 120
Query: 104 ARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKT 163
ARQH+N NM IML+ NK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI T
Sbjct: 121 ARQHSNSNMVIMLIANKSDLESRREVKKEEGEAFAREHGLVFMETSAKTASNVEEAFINT 180
Query: 164 AAKILQNIQEGALDAVNDQSGIKVG 188
A +I + IQEG D N+ +GIK+G
Sbjct: 181 AKEIYEKIQEGVFDINNEANGIKIG 205
>gi|297800396|ref|XP_002868082.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
gi|297313918|gb|EFH44341.1| hypothetical protein ARALYDRAFT_329812 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 148/211 (70%), Positives = 171/211 (81%), Gaps = 8/211 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY Y FKYI+IGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFG++ +TID PIKLQIW
Sbjct: 1 MSYAYRFKYILIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGSKKITIDNIPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL+SWLE+AR+HA+ NM+ ML+GNK
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARRHASENMTTMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL +RAVS EEGEQFA+E+GL+F+EASA+TA NVEEAFI+TAA I + IQ+G +D N
Sbjct: 121 CDLEEKRAVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFIETAATIYKRIQDGVVDEAN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS-QRGGCC 210
+ G GP D S QR GCC
Sbjct: 181 EP-------GITPGPFDGYDAISSKQRRGCC 204
>gi|297297438|ref|XP_001096730.2| PREDICTED: ras-related protein Rab-2B-like [Macaca mulatta]
Length = 190
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 144/181 (79%), Positives = 160/181 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 D 181
+
Sbjct: 181 E 181
>gi|145334237|ref|NP_001078499.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661182|gb|AEE86582.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 165
Score = 306 bits (785), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 143/164 (87%), Positives = 155/164 (94%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
MVT+DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQ
Sbjct: 1 MVTVDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
HANPNMSIML+GNKCDLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAK
Sbjct: 61 HANPNMSIMLIGNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAK 120
Query: 167 ILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
ILQNIQ+G D N+ SGIK+GYGR QG +G RDGT+SQ GGCC
Sbjct: 121 ILQNIQDGVFDVSNESSGIKIGYGRTQGAAGGRDGTISQGGGCC 164
>gi|320165325|gb|EFW42224.1| RAB2A [Capsaspora owczarzaki ATCC 30864]
Length = 219
Score = 306 bits (784), Expect = 3e-81, Method: Compositional matrix adjust.
Identities = 153/222 (68%), Positives = 171/222 (77%), Gaps = 20/222 (9%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + +KLQIWDT
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKQLKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TF HL++WL DARQH+N NM IML+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFLHLTNWLSDARQHSNTNMVIMLIGNKSD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEGEQFA E+GL+F+E SA+TA NVE+AFI TA +I Q IQ+G D N+
Sbjct: 124 LDARRQVSYEEGEQFAAEHGLIFMETSAKTAANVEDAFIGTAKQIYQKIQQGIFDLSNEA 183
Query: 183 SGIKVGYGRGQGPSGARDGTV--------------SQRGGCC 210
+GIKV GP A G V + GGCC
Sbjct: 184 NGIKV------GPQHAGSGVVPVGRGETGGDGGNPNAGGGCC 219
>gi|395745671|ref|XP_003778310.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-2B [Pongo
abelii]
Length = 222
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 151/222 (68%), Positives = 173/222 (77%), Gaps = 12/222 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF------IKTAAKILQNIQEG 174
DL R V +EEGE FA+E+GL+F+E SA+TA NVEE I TA +I + IQ+G
Sbjct: 121 SDLXVPRDVKREEGEAFAREHGLIFMETSAKTACNVEEVLFGKQPXINTAKEIYRKIQQG 180
Query: 175 ALDAVNDQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
D N+ +GIK+G GPS ++ + + GCC
Sbjct: 181 LFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 222
>gi|193875868|gb|ACF24570.1| Ras-related small GTPase Rab2 [Gymnochlora stellata]
Length = 213
Score = 305 bits (780), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 149/212 (70%), Positives = 170/212 (80%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI+ + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKQLIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQH-ANPNMSIMLVGN 119
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+ WL++ARQ+ ++ +M IML+GN
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTQWLKEARQNSSHQDMVIMLIGN 120
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
K DL HRR VS +EG+QFA +NGL+FLE SA+TA NV EAF TA KI +NI+ G D
Sbjct: 121 KSDLDHRRQVSTKEGQQFADQNGLIFLETSAKTAANVNEAFCATARKIYKNIENGTYDTT 180
Query: 180 NDQSGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
N+ GIKVG + T S GGCC
Sbjct: 181 NEAHGIKVGLSNNKMNYDTEYKTNSNSSGGCC 212
>gi|426236109|ref|XP_004012017.1| PREDICTED: ras-related protein Rab-2A [Ovis aries]
Length = 219
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 162/186 (87%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ +L KYI++ + GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDT
Sbjct: 10 FSFLLKYIVLIEKGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK D
Sbjct: 70 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+
Sbjct: 130 LESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEA 189
Query: 183 SGIKVG 188
+GIK+G
Sbjct: 190 NGIKIG 195
>gi|452820726|gb|EME27765.1| Rab family, other [Galdieria sulphuraria]
Length = 208
Score = 303 bits (777), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 171/210 (81%), Gaps = 2/210 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+IIIGD+GVGKSCLLLQFTDKRFQP+HDLTIGVEFGA++V +DG+ IKLQIW
Sbjct: 1 MSYAYLFKFIIIGDSGVGKSCLLLQFTDKRFQPIHDLTIGVEFGAKIVQMDGKTIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQ+++P+M+++LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLATWLEDARQYSSPDMTVVLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRR VSKEEGE FA+ +GL FLE SA+TA +VEE F + A I + I++G LD
Sbjct: 121 CDLEHRRQVSKEEGEAFARAHGLSFLETSAKTAFHVEETFTEAARTIYEKIKQGKLDLNG 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
D G+KV G + +R GCC
Sbjct: 181 DFQGVKV--GATANTIQLQQNNQDERSGCC 208
>gi|340381310|ref|XP_003389164.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Amphimedon
queenslandica]
Length = 217
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 150/221 (67%), Positives = 172/221 (77%), Gaps = 15/221 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF HL+SWL+DARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLTSWLDDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V EEG FA+E+GL+F+E SA+TA NVEEAFI TA ++ + IQ+G D N
Sbjct: 121 SDLDAKRDVKFEEGLAFAQEHGLVFMETSAKTAANVEEAFINTAKEVYKKIQDGVFDITN 180
Query: 181 DQSGIKVGY-----------GRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G P+ A+ G GGCC
Sbjct: 181 EANGIKLGPQHQGGGGGGQRAASADPNKAQGGG----GGCC 217
>gi|74096301|ref|NP_001027632.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
gi|28556900|dbj|BAC57527.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
Length = 176
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 142/176 (80%), Positives = 157/176 (89%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDGR IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGRQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGAL 176
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + G+L
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYEKNTRGSL 176
>gi|66501172|ref|XP_392651.2| PREDICTED: ras-related protein Rab-2-like [Apis mellifera]
gi|340709425|ref|XP_003393310.1| PREDICTED: ras-related protein Rab-2-like [Bombus terrestris]
gi|350407122|ref|XP_003487992.1| PREDICTED: ras-related protein Rab-2-like [Bombus impatiens]
gi|380017536|ref|XP_003692709.1| PREDICTED: ras-related protein Rab-2-like isoform 1 [Apis florea]
Length = 214
Score = 302 bits (774), Expect = 5e-80, Method: Compositional matrix adjust.
Identities = 152/198 (76%), Positives = 171/198 (86%), Gaps = 1/198 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +RR V +EEGE FA+E+GL+F+E SA+TA NVE+AFI TA I + IQEG D N
Sbjct: 121 SDLDNRREVRREEGEAFAREHGLVFMETSAKTAINVEDAFINTAKVIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRG-QGPSG 197
+ +GIK+G PSG
Sbjct: 181 EANGIKIGPQHSPTSPSG 198
>gi|414967|gb|AAA80150.1| Rab2, partial [Dictyostelium discoideum]
Length = 199
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 145/203 (71%), Positives = 168/203 (82%), Gaps = 7/203 (3%)
Query: 10 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFR 69
IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIWDTAGQESFR
Sbjct: 1 IIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDTAGQESFR 60
Query: 70 SITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAV 129
SITRSYYRG+AGALLVYDITRR+TFNHL+ WL+DAR +AN NM+I+L+GNK D+ +RAV
Sbjct: 61 SITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSDMESKRAV 120
Query: 130 SKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGY 189
S EEG QFA ENGL+FLE SA+TA NVEEAF+ TA+KI + IQ+G D N+ GIK+G
Sbjct: 121 SYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNESFGIKLG- 179
Query: 190 GRGQGPSGARDGTVSQR--GGCC 210
P+ +DGT + GGCC
Sbjct: 180 ----APTSKQDGTDQKPAGGGCC 198
>gi|327269715|ref|XP_003219638.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 316
Score = 301 bits (771), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 140/183 (76%), Positives = 161/183 (87%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQ 65
L+KY+++G GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQ
Sbjct: 110 LWKYVLMGVLGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQ 169
Query: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAH 125
ESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL
Sbjct: 170 ESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLES 229
Query: 126 RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGI 185
RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GI
Sbjct: 230 RREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGI 289
Query: 186 KVG 188
K+G
Sbjct: 290 KIG 292
>gi|190702475|gb|ACE75361.1| ras-related protein Rab-2 [Glyptapanteles indiensis]
Length = 214
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLDARREVRREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 139/167 (83%), Positives = 153/167 (91%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 167
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|224007553|ref|XP_002292736.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220971598|gb|EED89932.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 195
Score = 300 bits (769), Expect = 2e-79, Method: Compositional matrix adjust.
Identities = 143/192 (74%), Positives = 160/192 (83%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I + +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMIHIADKSVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TF HL WLE+ARQH+ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFKHLGRWLEEARQHSQSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRRAVS EEG+ FA ++GL+F+E SA+TA NVE+AFI TA +I NI G +D N
Sbjct: 121 NDLEHRRAVSTEEGKAFADKHGLIFMETSAKTAYNVEQAFINTAEEIHGNIVSGKIDVSN 180
Query: 181 DQSGIKVGYGRG 192
+ GIKVG G
Sbjct: 181 ESFGIKVGMAAG 192
>gi|326917676|ref|XP_003205122.1| PREDICTED: ras-related protein Rab-2A-like [Meleagris gallopavo]
Length = 352
Score = 300 bits (768), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 141/184 (76%), Positives = 162/184 (88%), Gaps = 1/184 (0%)
Query: 6 LFKYIIIG-DTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
LF ++I+G +TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAG
Sbjct: 145 LFFFVIVGFETGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAG 204
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL
Sbjct: 205 QESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLE 264
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +G
Sbjct: 265 SRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANG 324
Query: 185 IKVG 188
IK+G
Sbjct: 325 IKIG 328
>gi|47028315|gb|AAT09090.1| RAB2 [Bigelowiella natans]
Length = 215
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 147/212 (69%), Positives = 169/212 (79%), Gaps = 3/212 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TI+ + IKLQIWD
Sbjct: 3 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIEKQLIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQH-ANPNMSIMLVGNK 120
TAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+ WL++ARQ+ ++ +M IML+GNK
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTQWLKEARQNSSHQDMVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL HRR VS +EG+QFA +NGL+FLE SA+TA NV EAF TA KI +NI+ G D N
Sbjct: 123 SDLDHRRQVSTKEGQQFADQNGLIFLETSAKTAANVNEAFCATARKIYKNIELGTYDTTN 182
Query: 181 DQSGIKVGYGRGQ--GPSGARDGTVSQRGGCC 210
+ GIKVG + + S GGCC
Sbjct: 183 EAHGIKVGLSNKNLYSDNDYKSNQPSSGGGCC 214
>gi|403346064|gb|EJY72416.1| RAB-2,4,14, putative [Oxytricha trifallax]
Length = 222
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 149/223 (66%), Positives = 173/223 (77%), Gaps = 13/223 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR V I + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRQQHDLTIGVEFGARTVQIQNKNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESF+SITRSYYRGAAGALLVYDITRR+TFNHL+ WLE+ RQ+ NP+M+IML+GNK
Sbjct: 61 DTAGQESFKSITRSYYRGAAGALLVYDITRRDTFNHLTRWLEEVRQNGNPDMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RR VS EEGE+FAKENGL+F E SA+TA NVEEAF++T+ I +NI +G D +
Sbjct: 121 CDLDARRQVSFEEGERFAKENGLIFTETSAKTAFNVEEAFLQTSQMIYENIDKGMYDLSS 180
Query: 181 DQSGIKVG------------YGRGQGPSGARDGTVSQRGGCCS 211
++SGI+VG Y +GQ G + GGCCS
Sbjct: 181 EKSGIRVGNESYSVMPGDNAYNQGQ-KLGQKGQQKQVSGGCCS 222
>gi|308805729|ref|XP_003080176.1| YptC4 (ISS) [Ostreococcus tauri]
gi|116058636|emb|CAL54343.1| YptC4 (ISS) [Ostreococcus tauri]
Length = 215
Score = 299 bits (765), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 141/193 (73%), Positives = 164/193 (84%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YL KYIIIGDTGVGKSCLLLQFTD+RFQ VHDLTIGVEFG+RMVT G+ +KLQIW
Sbjct: 1 MSYAYLLKYIIIGDTGVGKSCLLLQFTDQRFQLVHDLTIGVEFGSRMVTAGGKQVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYD+TRRETF++LSSWL+D R +AN NM IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDVTRRETFDNLSSWLQDCRANANHNMVIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D++HRRAVS EEGE FA+ENGLLF+E SA++A V++AF+ TA +L I G LD N
Sbjct: 121 SDVSHRRAVSTEEGEMFARENGLLFVETSAKSAFGVDDAFVATAGAVLAKIDTGVLDVKN 180
Query: 181 DQSGIKVGYGRGQ 193
+ SG+K+GY G+
Sbjct: 181 ESSGVKLGYDPGR 193
>gi|294944575|ref|XP_002784324.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
gi|239897358|gb|EER16120.1| RAB-2,4,14, putative [Perkinsus marinus ATCC 50983]
Length = 192
Score = 298 bits (763), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 140/184 (76%), Positives = 161/184 (87%), Gaps = 1/184 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRF+P HDLTIGVEFGAR+V +DG+ IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRPDHDLTIGVEFGARLVNVDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGA GALLVYDI+RR+TFNHL+ WLE+ARQ++NPNM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGATGALLVYDISRRDTFNHLTRWLEEARQNSNPNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RR VS +EG +FA++N L+FLEASA+TAQNVEEAF++TA KI +NI G D N
Sbjct: 121 CDL-ERREVSYDEGAKFARDNNLIFLEASAKTAQNVEEAFLQTARKIYENILAGVYDLSN 179
Query: 181 DQSG 184
+ S
Sbjct: 180 EVSN 183
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 138/168 (82%), Positives = 153/168 (91%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWD
Sbjct: 6 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 66 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I +
Sbjct: 126 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 173
>gi|307207076|gb|EFN84885.1| Ras-related protein Rab-2A [Harpegnathos saltator]
Length = 214
Score = 298 bits (762), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 147/188 (78%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETF+HL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFSHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLENRREVRREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>gi|256074809|ref|XP_002573715.1| rab-2414 [Schistosoma mansoni]
gi|360043854|emb|CCD81400.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 216
Score = 297 bits (761), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 169/217 (77%), Gaps = 8/217 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDT VGKSCLLLQFTD+RFQPV+DLTIGVEFGARMV I + IKLQ+W
Sbjct: 1 MSYAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGDKQIKLQVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYD+TRR+TFNHL+SWL+DARQHA+PNM I LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDVTRRDTFNHLASWLQDARQHASPNMVITLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RR V +EE E FA+EN LLF+E SA+T NVE+AF TA I + +Q G LD N
Sbjct: 121 CDLDARREVKQEEAEAFARENNLLFVETSAKTGVNVEQAFATTARAIYERLQLGLLDINN 180
Query: 181 DQSGIKVGYGR-------GQGPSGARDGTVSQRGGCC 210
D +GIK+G + GP G+ G + R CC
Sbjct: 181 DANGIKLGPQQINTRQTGSYGPVGSDSGG-NLRRRCC 216
>gi|73536134|pdb|2A5J|A Chain A, Crystal Structure Of Human Rab2b
Length = 191
Score = 296 bits (759), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 140/170 (82%), Positives = 154/170 (90%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIWDTAG
Sbjct: 20 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIWDTAG 79
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK DL
Sbjct: 80 QESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNKSDLE 139
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG 174
RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G
Sbjct: 140 SRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQG 189
>gi|357154071|ref|XP_003576660.1| PREDICTED: ras-related protein RABB1c-like [Brachypodium
distachyon]
Length = 209
Score = 296 bits (758), Expect = 3e-78, Method: Compositional matrix adjust.
Identities = 143/190 (75%), Positives = 163/190 (85%), Gaps = 3/190 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYI++GDTGVGKSCL+LQFTDKRFQPVHDLTIGVEFG+RMVTID R IKL IW
Sbjct: 1 MSYAYLFKYIVVGDTGVGKSCLMLQFTDKRFQPVHDLTIGVEFGSRMVTIDNRKIKLHIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHA--NPNMSIMLVG 118
DTAGQE+FRSITRSYYRGAA ALLVYDITRRETF+HL+SWLE+ RQ A N N++I+LVG
Sbjct: 61 DTAGQEAFRSITRSYYRGAAAALLVYDITRRETFSHLTSWLEEMRQLADGNNNITIVLVG 120
Query: 119 NKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
NK DL RRAVS EEGEQFAKENGL F+E SART NV+EAF+KTA+ + IQE A+D
Sbjct: 121 NKLDLEQRRAVSTEEGEQFAKENGLAFIETSARTRHNVDEAFVKTASAVYHKIQEDAID- 179
Query: 179 VNDQSGIKVG 188
++ +G KVG
Sbjct: 180 MSKCTGAKVG 189
>gi|440798712|gb|ELR19779.1| Rasrelated protein Rab-2B, putative [Acanthamoeba castellanii str.
Neff]
Length = 216
Score = 295 bits (755), Expect = 7e-78, Method: Compositional matrix adjust.
Identities = 149/217 (68%), Positives = 173/217 (79%), Gaps = 8/217 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDT VGKSC+LLQFTDKRFQ VHD+TIGVEFGAR+V I G +KLQIW
Sbjct: 1 MSYAYLFKYIIIGDTSVGKSCILLQFTDKRFQSVHDITIGVEFGARVVKIGGEDVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF+HL WLEDARQH++ NM I+L GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFDHLLVWLEDARQHSSQNMVIILCGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL H+RAVS++EGE+FA E+GLLFLE SA+TA+NVEEAF ++A I NIQ+G N
Sbjct: 121 ADLEHKRAVSRKEGERFAAEHGLLFLETSAKTAENVEEAFFRSANIINDNIQKGIF-IPN 179
Query: 181 DQSGIKVGYGRGQ----GPSGARDGTVS---QRGGCC 210
+ GIK+G +G G R GT++ + GGCC
Sbjct: 180 ETYGIKLGPAQGNTSEVGRGDGRGGTITTPGEGGGCC 216
>gi|194214888|ref|XP_001496741.2| PREDICTED: ras-related protein Rab-2A-like [Equus caballus]
Length = 223
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 137/180 (76%), Positives = 156/180 (86%)
Query: 9 YIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESF 68
+ I+ GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESF
Sbjct: 20 WTIMEAQGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESF 79
Query: 69 RSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRA 128
RSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR
Sbjct: 80 RSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRRE 139
Query: 129 VSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 140 VKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 199
>gi|401411449|ref|XP_003885172.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
gi|325119591|emb|CBZ55144.1| hypothetical protein NCLIV_055690 [Neospora caninum Liverpool]
Length = 214
Score = 293 bits (750), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 168/212 (79%), Gaps = 5/212 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR+++I GR +KLQIWDT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLISIAGRQVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TF HL+ WL++ RQ++NP+M+IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFIHLTRWLDEVRQNSNPHMTIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS +EG FA+++GL+FLE SA+TAQNV+EAFI TA KI +NIQ G D N+
Sbjct: 124 L-ERREVSFDEGAAFARQHGLIFLETSAKTAQNVDEAFILTARKIYENIQRGIYDLSNEA 182
Query: 183 SGIKVG----YGRGQGPSGARDGTVSQRGGCC 210
GIK G YG QG R + CC
Sbjct: 183 HGIKCGPINSYGSRQGSEQPRSLAEQRSASCC 214
>gi|355779713|gb|EHH64189.1| hypothetical protein EGM_17348, partial [Macaca fascicularis]
Length = 198
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 154/174 (88%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
+GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 1 SGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 60
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEG 134
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEG
Sbjct: 61 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEG 120
Query: 135 EQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
E FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 121 EAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 174
>gi|156103415|ref|XP_001617400.1| small GTPase Rab2 [Plasmodium vivax Sal-1]
gi|148806274|gb|EDL47673.1| small GTPase Rab2, putative [Plasmodium vivax]
Length = 213
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAFI TA KI NI E D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFIYTARKIYDNILEDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|440911480|gb|ELR61146.1| Ras-related protein Rab-2A, partial [Bos grunniens mutus]
Length = 199
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 154/174 (88%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
+GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 2 SGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 61
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEG 134
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEG
Sbjct: 62 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEG 121
Query: 135 EQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
E FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 122 EAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 175
>gi|221061627|ref|XP_002262383.1| rab2 gtpase [Plasmodium knowlesi strain H]
gi|193811533|emb|CAQ42261.1| rab2 gtpase, putative [Plasmodium knowlesi strain H]
Length = 213
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAFI TA KI NI E D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFIYTARKIYDNILEDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|410987203|ref|XP_003999895.1| PREDICTED: ras-related protein Rab-2A [Felis catus]
Length = 285
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 135/172 (78%), Positives = 152/172 (88%)
Query: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYY 76
VGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSYY
Sbjct: 90 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYY 149
Query: 77 RGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQ 136
RGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEGE
Sbjct: 150 RGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEA 209
Query: 137 FAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 210 FAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 261
>gi|334325632|ref|XP_001379431.2| PREDICTED: ras-related protein Rab-2A-like, partial [Monodelphis
domestica]
Length = 203
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 136/174 (78%), Positives = 154/174 (88%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
+GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 6 SGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 65
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEG 134
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEG
Sbjct: 66 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEG 125
Query: 135 EQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
E FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 126 EAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 179
>gi|449279474|gb|EMC87055.1| Ras-related protein Rab-2A, partial [Columba livia]
Length = 197
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/173 (78%), Positives = 153/173 (88%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSY
Sbjct: 1 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 60
Query: 76 YRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGE 135
YRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEGE
Sbjct: 61 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 120
Query: 136 QFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 121 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 173
>gi|354501242|ref|XP_003512701.1| PREDICTED: ras-related protein Rab-2A-like [Cricetulus griseus]
Length = 295
Score = 292 bits (747), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 136/175 (77%), Positives = 154/175 (88%)
Query: 14 DTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITR 73
+ GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITR
Sbjct: 97 EKGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKRIKLQIWDTAGQESFRSITR 156
Query: 74 SYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEE 133
SYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEE
Sbjct: 157 SYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEE 216
Query: 134 GEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
GE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 217 GEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 271
>gi|13397937|emb|CAC34627.1| putative Rab2 GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR+V +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLVNLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAF+ TA KI NI E D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFLYTARKIYDNILEDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|387202244|gb|AFJ68941.1| gtp-binding protein gb2, partial [Nannochloropsis gaditana CCMP526]
Length = 206
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 146/208 (70%), Positives = 163/208 (78%), Gaps = 3/208 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK I+IGD+GVGKSCLLLQFTD+RF VHDLTIGVEFGAR+V IDG+ IKLQIW
Sbjct: 1 MSYAYLFKSIVIGDSGVGKSCLLLQFTDRRFVQVHDLTIGVEFGARLVHIDGKAIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WLE+A+ +++PNM IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLARWLEEAKLYSSPNMVIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CD RRAVS EG+ FA+ +GLLFLE SART NVE AF TA KI +NI +G D N
Sbjct: 121 CDADGRRAVSTAEGQAFAEAHGLLFLETSARTGHNVEAAFSHTAEKIYENILQGVYDPNN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGG 208
D GIKVG GP T + GG
Sbjct: 181 DTHGIKVGV---PGPGQTGKKTRGREGG 205
>gi|444720767|gb|ELW61541.1| Ras-related protein Rab-2A, partial [Tupaia chinensis]
Length = 199
Score = 292 bits (747), Expect = 8e-77, Method: Compositional matrix adjust.
Identities = 136/173 (78%), Positives = 153/173 (88%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSY
Sbjct: 3 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 62
Query: 76 YRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGE 135
YRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEGE
Sbjct: 63 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 122
Query: 136 QFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 123 AFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 175
>gi|124806378|ref|XP_001350706.1| Rab2, GTPase [Plasmodium falciparum 3D7]
gi|23496833|gb|AAN36386.1| Rab2, GTPase [Plasmodium falciparum 3D7]
Length = 213
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/186 (74%), Positives = 160/186 (86%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAF+ TA KI NI E D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFLYTARKIYDNILEDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|351713651|gb|EHB16570.1| Ras-related protein Rab-2A [Heterocephalus glaber]
Length = 350
Score = 291 bits (744), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 139/187 (74%), Positives = 160/187 (85%), Gaps = 4/187 (2%)
Query: 3 YD-YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
YD Y+ K ++ + VGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWD
Sbjct: 143 YDAYIMKELL---SCVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 199
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 200 TAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKS 259
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+
Sbjct: 260 DLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNE 319
Query: 182 QSGIKVG 188
+GIK+G
Sbjct: 320 ANGIKIG 326
>gi|256074811|ref|XP_002573716.1| rab-2414 [Schistosoma mansoni]
gi|360043855|emb|CCD81401.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 196
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/181 (75%), Positives = 153/181 (84%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDT VGKSCLLLQFTD+RFQPV+DLTIGVEFGARMV I + IKLQ+W
Sbjct: 1 MSYAYLFKYIIIGDTAVGKSCLLLQFTDQRFQPVYDLTIGVEFGARMVNIGDKQIKLQVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYD+TRR+TFNHL+SWL+DARQHA+PNM I LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDVTRRDTFNHLASWLQDARQHASPNMVITLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL RR V +EE E FA+EN LLF+E SA+T NVE+AF TA I + +Q G LD N
Sbjct: 121 CDLDARREVKQEEAEAFARENNLLFVETSAKTGVNVEQAFATTARAIYERLQLGLLDINN 180
Query: 181 D 181
D
Sbjct: 181 D 181
>gi|68068036|ref|XP_675931.1| Rab2 GTPase [Plasmodium berghei strain ANKA]
gi|70938894|ref|XP_740062.1| Rab2 GTPase [Plasmodium chabaudi chabaudi]
gi|56495388|emb|CAH95114.1| Rab2 GTPase, putative [Plasmodium berghei]
gi|56517511|emb|CAH84846.1| Rab2 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 213
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/186 (74%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAF+ TA KI NI D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFLYTARKIYDNILNDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|82595062|ref|XP_725689.1| Rab2 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23480789|gb|EAA17254.1| putative Rab2 GTPase [Plasmodium yoelii yoelii]
Length = 213
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 138/186 (74%), Positives = 159/186 (85%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 4 YEYLFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCD
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS EEG QFA++NGL+FLE SA+TA+NVEEAF+ TA KI NI D N+
Sbjct: 124 L-ERREVSAEEGAQFARQNGLIFLETSAKTAKNVEEAFLYTARKIYDNILNDVYDLSNES 182
Query: 183 SGIKVG 188
GIK G
Sbjct: 183 YGIKYG 188
>gi|149061036|gb|EDM11646.1| RAB2, member RAS oncogene family [Rattus norvegicus]
Length = 162
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 134/161 (83%), Positives = 147/161 (91%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI 161
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEE I
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEVSI 161
>gi|237830259|ref|XP_002364427.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962091|gb|EEA97286.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487500|gb|EEE25732.1| RAB-2,4,14, putative [Toxoplasma gondii GT1]
gi|221507298|gb|EEE32902.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii VEG]
Length = 214
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 144/212 (67%), Positives = 167/212 (78%), Gaps = 5/212 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR+V+I GR +KLQIWDT
Sbjct: 4 YQYLFKYIIIGDTGVGKSCLLLQFTDKRFRTDHDLTIGVEFGARLVSIAGRQVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TF HL+ WL++ RQ++NP+M+IML+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVYDITRRDTFLHLTRWLDEVRQNSNPHMTIMLIGNKSD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS +EG FA+++GL+FLE SA+TAQNV+EAFI TA KI +NIQ G D N+
Sbjct: 124 L-ERREVSFDEGAAFARQHGLIFLETSAKTAQNVDEAFILTARKIYENIQRGIYDLSNEA 182
Query: 183 SGIKVG----YGRGQGPSGARDGTVSQRGGCC 210
GIK G YG QG R + CC
Sbjct: 183 HGIKCGPVNAYGSRQGSEQPRSLAEQRSASCC 214
>gi|116734835|ref|NP_001068822.1| ras-related protein Rab-2A [Bos taurus]
gi|109939903|gb|AAI18272.1| RAB2A, member RAS oncogene family [Bos taurus]
gi|296480621|tpg|DAA22736.1| TPA: RAB2A, member RAS oncogene family [Bos taurus]
Length = 189
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 147/159 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEA 159
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEA
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEA 159
>gi|281205133|gb|EFA79326.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 253
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 149/254 (58%), Positives = 172/254 (67%), Gaps = 48/254 (18%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM++ID +PIKLQIWDT
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMISIDNKPIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWL--------------------- 101
AGQESFRSITRSYYRG+AGALLVYDITRRETFNHL+ WL
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRETFNHLTCWLSKYKRKQNNTLQLAPPQNHDN 121
Query: 102 -------------------------EDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQ 136
+DAR AN NM+I+L+GNK DL +RAVS EEG +
Sbjct: 122 CVPHSNLHLTWISAQCQMRFWADDVDDARAFANSNMTIILIGNKSDLEQKRAVSYEEGAK 181
Query: 137 FAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPS 196
FA+ENGL+FLE SA+TA NVEEAFI TA KI + IQ+G D ++ GIK+G +
Sbjct: 182 FAEENGLIFLETSAKTAANVEEAFINTAKKIYEKIQKGDFDIKDETFGIKLGQPSNKVEI 241
Query: 197 GARDGTVSQRGGCC 210
GA +Q+ GCC
Sbjct: 242 GA--APPAQKSGCC 253
>gi|168052188|ref|XP_001778533.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
gi|162670131|gb|EDQ56706.1| Rab2/RabB-family small GTPase [Physcomitrella patens subsp. patens]
Length = 220
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 148/217 (68%), Positives = 168/217 (77%), Gaps = 7/217 (3%)
Query: 2 SYDYLFKYI-----IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIK 56
+Y+ +K I I+ VGKSCLLLQ TDKRFQ +HDLTI VEF ARMVTID +PIK
Sbjct: 4 TYNLFYKTIMNLNFILFLFSVGKSCLLLQSTDKRFQSMHDLTISVEFRARMVTIDNKPIK 63
Query: 57 LQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIML 116
LQIW+T QESF SITR YY+GAAGA LVYDITRR+TFNHL+SWLEDARQHAN NM+IML
Sbjct: 64 LQIWNTMRQESFWSITRLYYKGAAGASLVYDITRRKTFNHLASWLEDARQHANSNMTIML 123
Query: 117 VGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGAL 176
+GNKCDLA RRA+S EEGEQFAKENGL+F+E SA+TA NVE+AFIKTAA I Q I+EG
Sbjct: 124 IGNKCDLAPRRAISTEEGEQFAKENGLVFMETSAKTAHNVEDAFIKTAATIYQKIEEGVF 183
Query: 177 DAVNDQSGIKVGYG--RGQGPSGARDGTVSQRGGCCS 211
DA ++ GIKVGYG G G A G QR CCS
Sbjct: 184 DASDESFGIKVGYGGIPGTGTGSAGGGAAVQRSVCCS 220
>gi|303272713|ref|XP_003055718.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463692|gb|EEH60970.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 219
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 140/186 (75%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQ VHDLTIGVEFG+R+V I + IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQHVHDLTIGVEFGSRLVAIGEKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TF HL+SWLEDARQHANPNM++ LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFEHLTSWLEDARQHANPNMTVTLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D R VS EEGE FA+E+GL FLE SA+T++ VEE F TAA I I +G LD N
Sbjct: 121 SDAEASRVVSTEEGEAFAREHGLAFLETSAQTSEGVEEVFTSTAAAICAKIDDG-LDVNN 179
Query: 181 DQSGIK 186
+ +GIK
Sbjct: 180 ESNGIK 185
>gi|340059728|emb|CCC54123.1| putative ras-related protein rab-2a [Trypanosoma vivax Y486]
Length = 211
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 173/211 (81%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+Y+FKYIIIGD+GVGKSCLLLQFTD+RF+P+HDLTIGVEFGAR+V I+ + +KLQIWDT
Sbjct: 4 YNYVFKYIIIGDSGVGKSCLLLQFTDRRFEPLHDLTIGVEFGARVVPIENKNVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRRETF HL +WLEDAR +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRETFMHLQTWLEDARANANTTVVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD--AVN 180
LA +R VS+EEGE FA+++ L+F+E SA+TAQNV++AF+KTA+ I +N+Q G LD V+
Sbjct: 124 LATKRQVSREEGESFAQKHNLVFMETSAKTAQNVDDAFLKTASMIYKNVQSGVLDPSVVS 183
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + R QG +GA + ++ GG C+
Sbjct: 184 GKHTLASTDARTQG-TGASN---NEGGGACA 210
>gi|74143960|dbj|BAE41281.1| unnamed protein product [Mus musculus]
Length = 193
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 134/159 (84%), Positives = 146/159 (91%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEA 159
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEA 159
>gi|209881440|ref|XP_002142158.1| Rab2 GTPase protein [Cryptosporidium muris RN66]
gi|209557764|gb|EEA07809.1| Rab2 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 214
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/186 (73%), Positives = 155/186 (83%), Gaps = 1/186 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFKYIIIGDT VGKSCLLLQFTD RF+ HDLTIGVEFGAR+V ID + IKLQIWDT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDHRFRIDHDLTIGVEFGARVVNIDSKQIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDI+RRETFNHL WL + +++A P M+IML+GNK D
Sbjct: 65 AGQESFRSITRSYYRGAAGALLVYDISRRETFNHLGRWLSEVKKNAAPYMTIMLIGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V+ EEG QFA++NGL+FLE SA+TA NVEEAF+KTA KI +NI +G D N+
Sbjct: 125 L-ERREVTTEEGSQFAQQNGLIFLETSAKTAHNVEEAFVKTAEKIYKNILDGVYDLTNEA 183
Query: 183 SGIKVG 188
GIK G
Sbjct: 184 HGIKCG 189
>gi|164612813|gb|ABY63655.1| Rab GTPase 2a [Euplotes octocarinatus]
Length = 222
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/191 (69%), Positives = 157/191 (82%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYIIIGDTGVGKSCLLLQFTDKRF+ HDLTIGVEFGAR V I+G IKLQIWD
Sbjct: 3 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFRTQHDLTIGVEFGARAVEINGETIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESF+SITRSYYRGAAGALLVYDITRRETFNH+S+WL++ RQ+ N +M I+L+GNK
Sbjct: 63 TAGQESFKSITRSYYRGAAGALLVYDITRRETFNHISTWLDEVRQNGNSDMVIILIGNKS 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R VS EEG+ FAKEN L+F+E SA+ + NVE+AF++T+ I NI G D N+
Sbjct: 123 DLDSKRQVSTEEGKSFAKENNLIFMETSAKNSTNVEDAFLETSKFIYDNITNGVYDLSNE 182
Query: 182 QSGIKVGYGRG 192
+SGI+VG G
Sbjct: 183 KSGIRVGSKAG 193
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 156/175 (89%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
+Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+++I GR +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGRSVKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQESFRSITRSYYRGA+GALLVYD+TRR+TF HL SWLEDA+ +AN + IML+GNKCDL
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
+R VS+EEGE FA+ NGL+F+E SA+T++NV++AF++TAA I N+Q G +DA
Sbjct: 125 DSKRQVSREEGEAFARSNGLMFMETSAKTSKNVDDAFLQTAALIYDNVQLGVIDA 179
>gi|357514605|ref|XP_003627591.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
gi|355521613|gb|AET02067.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
Length = 189
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 133/189 (70%), Positives = 155/189 (82%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS Y FKYIIIGDTGVGKSCLLLQFTD RFQ HD+TIGVEFG R + I+ +KLQIW
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSITRSYYR AAGALLVYDITRRETF+H+++WLEDARQHA+ +M IMLVGNK
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMATWLEDARQHASSDMIIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLA R VS EEGE+FAKENGL+F+E SA++ +N+EEAF+KTA I +NIQ D ++
Sbjct: 121 SDLAGNRLVSTEEGEKFAKENGLMFMEVSAKSRENIEEAFVKTAESIYKNIQVRVSDLLD 180
Query: 181 DQSGIKVGY 189
+ IKVGY
Sbjct: 181 ETHEIKVGY 189
>gi|74026032|ref|XP_829582.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70834968|gb|EAN80470.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
Length = 212
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 166/206 (80%), Gaps = 9/206 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRR+TF HL +WLEDAR +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R VS+EEGE FA+++ L+F+E SA+TAQNV++AF+KTAA I N++ G LDA
Sbjct: 124 LEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG--- 180
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG 208
V +G GP AR VS+ GG
Sbjct: 181 ---AVSGKQGTGPGVAR---VSRTGG 200
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 131/177 (74%), Positives = 151/177 (85%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
+ Y YLFKYII+GDT VGKSCLLLQFTDKRFQPVHDLTIGVEFG+R +TI+ +KLQIW
Sbjct: 17 LPYKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDLTIGVEFGSRTLTIEDNQVKLQIW 76
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSITRSYYRGAAGALLVYDITRRETF HL+SWLED R+++N N+ IML+GNK
Sbjct: 77 DTAGQEKFRSITRSYYRGAAGALLVYDITRRETFEHLTSWLEDCRKYSNSNIVIMLIGNK 136
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
CDL +R VSKEEG FAKE+ LLFLE SA+TA+NVE+AFI TA I + +EG +D
Sbjct: 137 CDLESKRQVSKEEGAAFAKEHNLLFLETSAKTAENVEQAFINTARTIYETTREGDID 193
>gi|261335598|emb|CBH18592.1| ras-related protein rab-2a, putative [Trypanosoma brucei gambiense
DAL972]
Length = 212
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 138/206 (66%), Positives = 166/206 (80%), Gaps = 9/206 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRR+TF HL +WLEDAR +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R VS+EEGE FA+++ L+F+E SA+TAQNV++AF+KTAA I N++ G LDA
Sbjct: 124 LEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG--- 180
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG 208
V +G GP AR VS+ GG
Sbjct: 181 ---AVSGKQGTGPGVAR---VSRAGG 200
>gi|157874060|ref|XP_001685525.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
gi|68128597|emb|CAJ08729.1| putative ras-related protein rab-2a [Leishmania major strain
Friedlin]
Length = 211
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 156/175 (89%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
+Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+++I G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQESFRSITRSYYRGA+GALLVYD+TRR+TF HL SWLEDA+ +AN + IML+GNKCDL
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
+R VS+EEGE FA+ NGL+F+E SA+T+QNV++AF++TAA I N+Q G +DA
Sbjct: 125 ESKRQVSREEGEAFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMIDA 179
>gi|90075602|dbj|BAE87481.1| unnamed protein product [Macaca fascicularis]
Length = 161
Score = 283 bits (723), Expect = 4e-74, Method: Compositional matrix adjust.
Identities = 130/155 (83%), Positives = 143/155 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQN 155
DL RR V KEEGE FA+E+GL+F+E SA+TA N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASN 155
>gi|146096690|ref|XP_001467894.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|398020934|ref|XP_003863630.1| ras-related protein rab-2a, putative [Leishmania donovani]
gi|134072260|emb|CAM70965.1| putative ras-related protein rab-2a [Leishmania infantum JPCM5]
gi|322501863|emb|CBZ36946.1| ras-related protein rab-2a, putative [Leishmania donovani]
Length = 211
Score = 282 bits (722), Expect = 6e-74, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 156/175 (89%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
+Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+++I G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQESFRSITRSYYRGA+GALLVYD+TRR+TF HL SWLEDA+ +AN + IML+GNKCDL
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
+R VS+EEGE FA+ NGL+F+E SA+T+QNV++AF++TAA I N+Q G +DA
Sbjct: 125 ESKRQVSREEGEAFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMIDA 179
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 282 bits (721), Expect = 7e-74, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 156/175 (89%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
+Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+++I G+ +KLQIWDTA
Sbjct: 5 NYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQESFRSITRSYYRGA+GALLVYD+TRR+TF HL SWLEDA+ +AN + IML+GNKCDL
Sbjct: 65 GQESFRSITRSYYRGASGALLVYDVTRRDTFTHLQSWLEDAKANANTALVIMLIGNKCDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
+R VS+EEGE FA+ NGL+F+E SA+T+QNV++AF++TAA I N+Q G +DA
Sbjct: 125 DSKRQVSREEGEAFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQLGMIDA 179
>gi|170057342|ref|XP_001864442.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167876764|gb|EDS40147.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 207
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 135/184 (73%), Positives = 155/184 (84%), Gaps = 1/184 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+ L + + VGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWD
Sbjct: 12 TYNKLARRFLAHVGCVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 72 TAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNKS 131
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RR V KEEGE FA+E+GL+F+E SARTA NVEEAFI TA +I + IQEG D +N+
Sbjct: 132 DLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEKIQEGVFD-INN 190
Query: 182 QSGI 185
+ G
Sbjct: 191 EVGF 194
>gi|71415329|ref|XP_809735.1| ras-related protein rab-2a [Trypanosoma cruzi strain CL Brener]
gi|70874162|gb|EAN87884.1| ras-related protein rab-2a, putative [Trypanosoma cruzi]
Length = 207
Score = 281 bits (719), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 127/175 (72%), Positives = 153/175 (87%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRRETF HL +WLEDA+ +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRETFTHLQTWLEDAKANANTAIVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
L +R VS+EEGE FAK+N L+F+E SA+TAQNV++AF+KTA I +N+Q G +D
Sbjct: 124 LEAKRQVSREEGESFAKKNNLVFMETSAKTAQNVDDAFMKTAMMIYENVQSGVVD 178
>gi|342186535|emb|CCC96022.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 211
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 134/212 (63%), Positives = 164/212 (77%), Gaps = 4/212 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M + Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+V I + +KLQIW
Sbjct: 2 MQHHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVPIKQKNVKLQIW 61
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGA GALLVYD+TRRETF HL +WLEDAR ++N + IML+GNK
Sbjct: 62 DTAGQESFRSITRSYYRGACGALLVYDVTRRETFTHLQTWLEDARSNSNTAIVIMLIGNK 121
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD--A 178
CDL +R VS+EEGE FA N L+F+E SA+TA NV++AF+KTAA I +N++ G LD
Sbjct: 122 CDLEAKRQVSREEGEVFAARNNLVFMETSAKTAHNVDDAFLKTAAMIYENVESGVLDPSV 181
Query: 179 VNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
V+ + GI G + P G + + G C
Sbjct: 182 VSGKQGI--GSAANRMPRGTTNTQEDKTGCAC 211
>gi|407850451|gb|EKG04844.1| hypothetical protein TCSYLVIO_004099 [Trypanosoma cruzi]
Length = 207
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 153/175 (87%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRRETF HL +WLEDA+ +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRETFTHLQTWLEDAKANANTAIVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
L +R VS+EEGE FA++N L+F+E SA+TAQNV++AF+KTA I +N+Q G +D
Sbjct: 124 LEAKRQVSREEGESFARKNNLVFMETSAKTAQNVDDAFMKTAMMIYENVQSGVVD 178
>gi|125531414|gb|EAY77979.1| hypothetical protein OsI_33024 [Oryza sativa Indica Group]
Length = 211
Score = 280 bits (716), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 133/212 (62%), Positives = 165/212 (77%), Gaps = 6/212 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y FK++ IGD GVGKSCLLLQFTDKRF+ V DLT GVE+GA +V +DG+ KLQIWD
Sbjct: 4 TYAYRFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FR ITRSYYRG A LLVYDITRRETFNHL+SWLEDA QHA+ M+I+L+GNKC
Sbjct: 64 TAGQEAFRCITRSYYRGNAACLLVYDITRRETFNHLASWLEDATQHASARMTIILIGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL+HRR VS +EGEQFAKE+GLLF+EASA+TA NVE+AF A + + I++G ++ +++
Sbjct: 124 DLSHRRVVSYQEGEQFAKEHGLLFMEASAKTAHNVEKAFFLAARTVHKKIEDGVINLLDE 183
Query: 182 QSGIKVGYGRGQGPSGA-RDGTVSQRGG-CCS 211
G+K G P + RD + S R G CCS
Sbjct: 184 NCGVK----SGNAPVASRRDASFSSRDGRCCS 211
>gi|407411083|gb|EKF33291.1| hypothetical protein MOQ_002844 [Trypanosoma cruzi marinkellei]
Length = 207
Score = 280 bits (716), Expect = 3e-73, Method: Compositional matrix adjust.
Identities = 126/175 (72%), Positives = 153/175 (87%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + +KLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIQQKNVKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRRETF HL +WLEDA+ +AN + IML+GNKCD
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRETFTHLQTWLEDAKANANTAIVIMLIGNKCD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
L +R VS+EEGE FA++N L+F+E SA+TAQNV++AF+KTA I +N+Q G +D
Sbjct: 124 LEAKRQVSREEGESFARKNNLVFMETSAKTAQNVDDAFMKTAMMIYENVQSGVVD 178
>gi|146182702|ref|XP_001025075.2| Ras family protein [Tetrahymena thermophila]
gi|146143741|gb|EAS04830.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777762|dbj|BAJ21277.1| Rab-family small GTPase Rab2A [Tetrahymena thermophila]
Length = 211
Score = 280 bits (715), Expect = 4e-73, Method: Compositional matrix adjust.
Identities = 136/211 (64%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSC+L QF DKRF+ HD+TIGVEFGARM++ D + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGALLVYDIT+RE+F HL WLE+ARQ+ NP MS +LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRSAAGALLVYDITKRESFQHLGRWLEEARQNGNPQMSFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL R VS EEGE+FAKE+ L++LE SA+TA NVEEAF +TA I + I +G +D
Sbjct: 121 CDLEQDRQVSYEEGEKFAKEHDLVYLEVSAKTAYNVEEAFKQTAKMIYEKINQGLIDPNI 180
Query: 181 DQSGIKVGYGRGQGPSGAR-DGTVSQRGGCC 210
+ G+KVG + A+ T GCC
Sbjct: 181 ETFGVKVGTEQNTMTLSAKTKPTPPASNGCC 211
>gi|126643983|ref|XP_001388160.1| Rab2 GTPase [Cryptosporidium parvum Iowa II]
gi|126117237|gb|EAZ51337.1| Rab2 GTPase, putative [Cryptosporidium parvum Iowa II]
Length = 185
Score = 278 bits (712), Expect = 8e-73, Method: Compositional matrix adjust.
Identities = 131/181 (72%), Positives = 154/181 (85%), Gaps = 1/181 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFKYIIIGDT VGKSCLLLQFTD+RF+ HDLTIGVEFGAR++ +D + IKLQIWDT
Sbjct: 5 YDYLFKYIIIGDTAVGKSCLLLQFTDRRFRVDHDLTIGVEFGARIINLDAKKIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRR+TFNHLS WL D +++A PNM+I+LVGNK D
Sbjct: 65 AGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLSKWLNDVKRNATPNMTIILVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V+ EEG +FA++NGLLF+E SA+T+ NVEEAF+K A KI +NI +G D N+
Sbjct: 125 L-DRREVTTEEGVEFAEKNGLLFIETSAKTSNNVEEAFMKVAEKIYKNILDGIYDLSNEV 183
Query: 183 S 183
S
Sbjct: 184 S 184
>gi|5738168|gb|AAD50281.1|AF169951_1 putative intermediate compartment protein [Tetrahymena thermophila]
Length = 211
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 134/211 (63%), Positives = 160/211 (75%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSC+L QF DKRF+ HD+TIGVEFGARM++ D + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCILSQFIDKRFKEKHDVTIGVEFGARMISFDNKNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESF+SITRSYY+ AAGALLVYDIT+RE+F HL WLE+ARQ+ NP MS +LVGNK
Sbjct: 61 DTAGQESFKSITRSYYKSAAGALLVYDITKRESFQHLGKWLEEARQNGNPQMSFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL R VS EEGE+FAKE+ L++LE SA+TA NVEEAF +TA I + I +G +D
Sbjct: 121 CDLEQDRQVSYEEGEKFAKEHDLVYLEVSAKTAYNVEEAFKQTAKMIYEKINQGLIDPNI 180
Query: 181 DQSGIKVGYGRGQGPSGAR-DGTVSQRGGCC 210
+ G+KVG + A+ T GCC
Sbjct: 181 ETFGVKVGTEQNTMTLSAKTKPTPPASNGCC 211
>gi|38224671|gb|AAR14147.1| Rab2B [Trypanosoma brucei]
Length = 212
Score = 278 bits (710), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 165/206 (80%), Gaps = 9/206 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FKYIIIGD+GVGKSCLLLQFTDKRF+P+HDLTIGVEFGAR+VTI + IKLQIWDT
Sbjct: 4 HHYVFKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARVVTIKEKNIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGA GALLVYD+TRR+TF HL +WLEDAR +AN + IML+GNK D
Sbjct: 64 AGQESFRSITRSYYRGACGALLVYDVTRRDTFTHLQTWLEDARSNANTAIVIMLIGNKRD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R VS+EEGE FA+++ L+F+E SA+TAQNV++AF+KTAA I N++ G LDA
Sbjct: 124 LEKKREVSREEGEAFARKHNLVFMETSAKTAQNVDDAFLKTAAMIYDNVESGVLDAG--- 180
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG 208
V +G GP AR VS+ GG
Sbjct: 181 ---AVSGKQGTGPGVAR---VSRAGG 200
>gi|332024209|gb|EGI64416.1| Ras-related protein Rab-2 [Acromyrmex echinatior]
Length = 194
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/188 (71%), Positives = 151/188 (80%), Gaps = 20/188 (10%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDSKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+
Sbjct: 61 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSQ----------- 109
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
K+EGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 110 ---------RKKEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYEKIQEGVFDINN 160
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 161 EANGIKIG 168
>gi|145511982|ref|XP_001441913.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834003|emb|CAI43252.1| rab_A28 [Paramecium tetraurelia]
gi|124409174|emb|CAK74516.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 272 bits (696), Expect = 6e-71, Method: Compositional matrix adjust.
Identities = 130/218 (59%), Positives = 163/218 (74%), Gaps = 8/218 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+I+IGDTGVGKSCLLLQF DKRF+ H++TIGVEFGARM+ +G+ IKLQIW
Sbjct: 1 MSYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGARMIEFEGQNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGA++VYDIT+RETF ++S WLE+A+Q+ NP ++ LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRSAAGAIIVYDITKRETFENISRWLEEAKQNGNPKLTFTLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EEG++FA+ NG+ F+E SA+TA NVEE F+KTA +IL+ I +D N
Sbjct: 121 SDLEADRQVSFEEGQEFARNNGIDFVEVSAKTANNVEEVFLKTAQQILEKINSNQIDPKN 180
Query: 181 DQSGIKVGYGRGQGPSGARDG--------TVSQRGGCC 210
+ GIKVG +G S + T ++G CC
Sbjct: 181 ESHGIKVGTEQGVKKSFINNTQQLQPQAETEEKQGTCC 218
>gi|357460067|ref|XP_003600315.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
gi|355489363|gb|AES70566.1| Ras-related protein Rab-2-A, partial [Medicago truncatula]
Length = 171
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 126/171 (73%), Positives = 145/171 (84%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS Y FKYIIIGDTGVGKSCLLLQFTD RFQ HD+TIGVEFG R + I+ +KLQIW
Sbjct: 1 MSRSYAFKYIIIGDTGVGKSCLLLQFTDNRFQRFHDVTIGVEFGIRTININNNSVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSITRSYYR AAGALLVYDITRRETF+H+++WLEDARQHA+ +M IMLVGNK
Sbjct: 61 DTAGQERFRSITRSYYRKAAGALLVYDITRRETFDHMATWLEDARQHASSDMIIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI 171
DLA R VS EEGE+FAKENGL+F+E SA++ +N+EEAF+KTA I +NI
Sbjct: 121 SDLAGNRLVSTEEGEKFAKENGLMFMEVSAKSRENIEEAFVKTAESIYKNI 171
>gi|145534915|ref|XP_001453196.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833742|emb|CAI39341.1| rab_B28 [Paramecium tetraurelia]
gi|124420907|emb|CAK85799.1| unnamed protein product [Paramecium tetraurelia]
Length = 218
Score = 272 bits (695), Expect = 8e-71, Method: Compositional matrix adjust.
Identities = 131/218 (60%), Positives = 165/218 (75%), Gaps = 8/218 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+I+IGDTGVGKSCLLLQF DKRF+ H++TIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGARMIEIDGQNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGA++VYDIT+RETF ++S WLE+A+Q+ NP ++ LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRSAAGAIIVYDITKRETFENISRWLEEAKQNGNPKLTFTLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EEG++FA+ +G+ F+E SA+TA NVEE F+KTA +IL+ I +D N
Sbjct: 121 SDLEADRQVSFEEGQEFARNHGVDFVEVSAKTANNVEEVFLKTAQQILEKINSNQIDPKN 180
Query: 181 DQSGIKVGYGRG------QGPSGARDGTVSQ--RGGCC 210
+ GIKVG +G P + T ++ +G CC
Sbjct: 181 ESHGIKVGTEQGIKKSFINSPQQLQPQTEAEDKQGTCC 218
>gi|340502213|gb|EGR28924.1| hypothetical protein IMG5_166730 [Ichthyophthirius multifiliis]
Length = 218
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 155/188 (82%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSC+L QF +K+F+ HD+TIGVEFGARM++ID + IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCVLSQFIEKKFKEKHDVTIGVEFGARMLSIDNKNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGALLVYDITRRE+F HLS WL++A+Q+ NP +S +L+GNK
Sbjct: 61 DTAGQESFRSITRSYYRSAAGALLVYDITRRESFQHLSRWLDEAKQNGNPQLSFILIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL ++R V+ EEG++FA++N L FLE SA+TA NVEEAF +TA I + I G ++
Sbjct: 121 CDLENQRQVTYEEGQEFARQNDLYFLEVSAKTAYNVEEAFKQTAKMIYEKINTGQINPGQ 180
Query: 181 DQSGIKVG 188
+ G+K+G
Sbjct: 181 ENFGVKIG 188
>gi|412986644|emb|CCO15070.1| predicted protein [Bathycoccus prasinos]
Length = 258
Score = 270 bits (690), Expect = 3e-70, Method: Compositional matrix adjust.
Identities = 138/217 (63%), Positives = 163/217 (75%), Gaps = 25/217 (11%)
Query: 1 MSYDYLFKYIIIGDTG------------------------VGKSCLLLQFTDKRFQPVHD 36
MSY YLFKYIIIGDTG VGKSCLLLQFTDKRFQ VHD
Sbjct: 1 MSYAYLFKYIIIGDTGKHILLFFTVTYTKSGFLEIIKNARVGKSCLLLQFTDKRFQRVHD 60
Query: 37 LTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNH 96
LTIGVEFG+RMVTI+ + +KLQIWDTAGQESFRSITRSYYRGAAGALLVYD++RRETF +
Sbjct: 61 LTIGVEFGSRMVTINNQQVKLQIWDTAGQESFRSITRSYYRGAAGALLVYDVSRRETFEN 120
Query: 97 LSSWLEDARQHANPNMSIMLVGNKCD-LAHRRAVSKEEGEQFAKENGLLFLEASARTAQN 155
L++WLED R+HAN ++I LVGNK D A +R VS+EEG +FA+ENGLLF+E SA T+ N
Sbjct: 121 LNAWLEDCRRHANEYVTITLVGNKADGAAAQRQVSEEEGLRFARENGLLFVETSAMTSAN 180
Query: 156 VEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRG 192
V+ AFI+TA I I+EG LD N+ +G+K+GY G
Sbjct: 181 VDGAFIETARVICNKIEEGYLDPTNETNGVKIGYMPG 217
>gi|260786308|ref|XP_002588200.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
gi|229273359|gb|EEN44211.1| hypothetical protein BRAFLDRAFT_57441 [Branchiostoma floridae]
Length = 215
Score = 268 bits (685), Expect = 1e-69, Method: Compositional matrix adjust.
Identities = 129/209 (61%), Positives = 157/209 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGLLFLEASA+T +NVEEAF+ TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFADENGLLFLEASAKTGENVEEAFLDTARKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ +G + D ++ G C
Sbjct: 187 ESGVQHKPSSPRGTQLSNDQPANKEGCAC 215
>gi|358333335|dbj|GAA51859.1| Ras-related protein Rab-2A [Clonorchis sinensis]
Length = 195
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 133/183 (72%), Positives = 146/183 (79%), Gaps = 12/183 (6%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ I G+ IKLQIWDTAGQESFRSITRSY
Sbjct: 11 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIGGKQIKLQIWDTAGQESFRSITRSY 70
Query: 76 YRGAAGALLVYDIT------------RRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
YRGAAGALLVYDIT RRETF HL+SWLEDARQH++ NM IML+GNK DL
Sbjct: 71 YRGAAGALLVYDITRYAFPFHICPFFRRETFTHLTSWLEDARQHSSSNMVIMLIGNKSDL 130
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA I + IQEG LD ND
Sbjct: 131 ESRRDVQKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKCIHEKIQEGVLDVNNDVG 190
Query: 184 GIK 186
+K
Sbjct: 191 FLK 193
>gi|20270077|gb|AAM18165.1|AC092172_25 Putative small GTP binding protein Rab2 [Oryza sativa Japonica
Group]
gi|31430908|gb|AAP52760.1| Ras-related protein Rab-2-B, putative [Oryza sativa Japonica Group]
gi|125574334|gb|EAZ15618.1| hypothetical protein OsJ_31026 [Oryza sativa Japonica Group]
Length = 196
Score = 265 bits (677), Expect = 8e-69, Method: Compositional matrix adjust.
Identities = 124/191 (64%), Positives = 155/191 (81%), Gaps = 1/191 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y FK++ IGD GVGKSCLLLQFTDKRF+ V DLT GVE+GA +V +DG+ KLQIWD
Sbjct: 4 TYAYRFKFVTIGDAGVGKSCLLLQFTDKRFREVEDLTTGVEYGACVVAVDGKNTKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRET-FNHLSSWLEDARQHANPNMSIMLVGNK 120
TAGQE+FR ITRSYYRG A LLVYDITRRET FNHL+SWLEDA QHA+ M+I+L+GNK
Sbjct: 64 TAGQEAFRCITRSYYRGNAACLLVYDITRRETFFNHLASWLEDATQHASARMTIILIGNK 123
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRR VS +EGEQFAKE+GLLF+EASA+TA NVE+AFI A + + I++G ++ ++
Sbjct: 124 CDLSHRRVVSYQEGEQFAKEHGLLFMEASAKTAHNVEKAFILAARTVHKKIEDGVINLLD 183
Query: 181 DQSGIKVGYGR 191
+ + + Y R
Sbjct: 184 ESTEEEKHYSR 194
>gi|389586410|dbj|GAB69139.1| small GTPase Rab2, partial [Plasmodium cynomolgi strain B]
Length = 196
Score = 265 bits (676), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/172 (73%), Positives = 146/172 (84%), Gaps = 1/172 (0%)
Query: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYY 76
VGKSCLLLQFTDKRF+ HDLTIGVEFGAR++ +D + IKLQIWDTAGQESFRSITRSYY
Sbjct: 1 VGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDTAGQESFRSITRSYY 60
Query: 77 RGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQ 136
RGAAGALLVYDITRRETFNHL+ WL++ RQ++NP+M+I+LVGNKCDL RR VS EEG Q
Sbjct: 61 RGAAGALLVYDITRRETFNHLNRWLDEVRQNSNPHMAIILVGNKCDL-ERREVSAEEGAQ 119
Query: 137 FAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FA++NGL+FLE SA+TA+NVEEAFI TA KI NI E D N+ GIK G
Sbjct: 120 FARQNGLIFLETSAKTAKNVEEAFIYTARKIYDNILEDVYDLSNESYGIKYG 171
>gi|213512047|ref|NP_001133753.1| ras-related protein Rab-14 [Salmo salar]
gi|209155216|gb|ACI33840.1| Ras-related protein Rab-14 [Salmo salar]
Length = 215
Score = 264 bits (674), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 130/213 (61%), Positives = 160/213 (75%), Gaps = 11/213 (5%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVS-----QRGGC 209
+SG++ PS + G +S QR GC
Sbjct: 187 ESGVQ------HKPSAPQGGPLSNEPQPQREGC 213
>gi|348532847|ref|XP_003453917.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 263 bits (673), Expect = 2e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 159/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R + QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRITNEPQPQREGC 213
>gi|387017952|gb|AFJ51094.1| ras-related protein Rab-14-like [Crotalus adamanteus]
Length = 215
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 159/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R + QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTNEPQPQREGC 213
>gi|440911197|gb|ELR60903.1| Ras-related protein Rab-14, partial [Bos grunniens mutus]
Length = 218
Score = 263 bits (672), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 10 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 69
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 70 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 129
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 130 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 189
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 190 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 216
>gi|327285133|ref|XP_003227289.1| PREDICTED: ras-related protein Rab-2A-like [Anolis carolinensis]
Length = 234
Score = 263 bits (672), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 123/177 (69%), Positives = 149/177 (84%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYI+IGD+GVGKSCLLLQFTDKRF H+LT+GVEFG+RM+TI+ + IKLQIW
Sbjct: 1 MAYAYLFKYIVIGDSGVGKSCLLLQFTDKRFLSSHNLTVGVEFGSRMITINDKKIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSI RSYYRGAAGALLVYDIT+R+TFNHL +WLEDAR++++ ++ I+LVGNK
Sbjct: 61 DTAGQESFRSIARSYYRGAAGALLVYDITKRDTFNHLHTWLEDARKNSSSHIVIVLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
DL +R V +EEGE FA+E+G++FLE SARTA NVEEAFI A I + I G D
Sbjct: 121 SDLEDQRVVQREEGEAFAREHGMVFLETSARTATNVEEAFICIAKGIYRKILRGQFD 177
>gi|16758368|ref|NP_446041.1| ras-related protein Rab-14 [Rattus norvegicus]
gi|72535182|ref|NP_001026953.1| ras-related protein Rab-14 [Sus scrofa]
gi|46577632|sp|P61107.3|RAB14_RAT RecName: Full=Ras-related protein Rab-14
gi|75060237|sp|Q52NJ6.3|RAB14_PIG RecName: Full=Ras-related protein Rab-14
gi|6002803|gb|AAF00150.1|AF152463_1 RAB14 protein [Homo sapiens]
gi|20379074|gb|AAM21097.1|AF498949_1 small GTP binding protein RAB14 [Homo sapiens]
gi|206535|gb|AAA41994.1| RAB14 [Rattus norvegicus]
gi|6625806|gb|AAF19400.1| GTPase Rab14 [Homo sapiens]
gi|62868634|gb|AAY17505.1| Ras-related protein Rab-14 [Sus scrofa]
gi|159906373|gb|ABX10875.1| RAB14 [Capra hircus]
Length = 215
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>gi|18390323|ref|NP_080973.1| ras-related protein Rab-14 [Mus musculus]
gi|19923483|ref|NP_057406.2| ras-related protein Rab-14 [Homo sapiens]
gi|55926076|ref|NP_001007505.1| rab14, member ras oncogene family [Xenopus (Silurana) tropicalis]
gi|61098298|ref|NP_001012814.1| ras-related protein Rab-14 [Gallus gallus]
gi|147900213|ref|NP_001087980.1| RAB14, member RAS oncogene family [Xenopus laevis]
gi|195539521|ref|NP_001124226.1| ras-related protein Rab-14 [Bos taurus]
gi|302563523|ref|NP_001181724.1| ras-related protein Rab-14 [Macaca mulatta]
gi|327532767|ref|NP_001126022.1| ras-related protein Rab-14 [Pongo abelii]
gi|73971644|ref|XP_532048.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Canis lupus
familiaris]
gi|109110403|ref|XP_001093688.1| PREDICTED: ras-related protein Rab-14-like isoform 1 [Macaca
mulatta]
gi|149641912|ref|XP_001512641.1| PREDICTED: ras-related protein Rab-14-like [Ornithorhynchus
anatinus]
gi|149738078|ref|XP_001504767.1| PREDICTED: ras-related protein Rab-14-like [Equus caballus]
gi|291408446|ref|XP_002720547.1| PREDICTED: GTPase Rab14 [Oryctolagus cuniculus]
gi|296190707|ref|XP_002743309.1| PREDICTED: ras-related protein Rab-14 [Callithrix jacchus]
gi|297270257|ref|XP_002800040.1| PREDICTED: ras-related protein Rab-14-like isoform 3 [Macaca
mulatta]
gi|301760428|ref|XP_002916000.1| PREDICTED: ras-related protein Rab-14-like [Ailuropoda melanoleuca]
gi|326930488|ref|XP_003211378.1| PREDICTED: ras-related protein Rab-14-like [Meleagris gallopavo]
gi|327290961|ref|XP_003230190.1| PREDICTED: ras-related protein Rab-14-like [Anolis carolinensis]
gi|332229896|ref|XP_003264122.1| PREDICTED: ras-related protein Rab-14 [Nomascus leucogenys]
gi|332832748|ref|XP_001149341.2| PREDICTED: ras-related protein Rab-14 [Pan troglodytes]
gi|334311476|ref|XP_001369724.2| PREDICTED: ras-related protein Rab-14-like [Monodelphis domestica]
gi|344271990|ref|XP_003407819.1| PREDICTED: ras-related protein Rab-14-like [Loxodonta africana]
gi|348586253|ref|XP_003478883.1| PREDICTED: ras-related protein Rab-14-like [Cavia porcellus]
gi|354491502|ref|XP_003507894.1| PREDICTED: ras-related protein Rab-14-like [Cricetulus griseus]
gi|395505605|ref|XP_003757130.1| PREDICTED: ras-related protein Rab-14 [Sarcophilus harrisii]
gi|397526487|ref|XP_003833155.1| PREDICTED: ras-related protein Rab-14 [Pan paniscus]
gi|402896514|ref|XP_003911342.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|402896516|ref|XP_003911343.1| PREDICTED: ras-related protein Rab-14 [Papio anubis]
gi|403266081|ref|XP_003925225.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|403266083|ref|XP_003925226.1| PREDICTED: ras-related protein Rab-14 [Saimiri boliviensis
boliviensis]
gi|410978973|ref|XP_003995861.1| PREDICTED: ras-related protein Rab-14 [Felis catus]
gi|426219615|ref|XP_004004014.1| PREDICTED: ras-related protein Rab-14 [Ovis aries]
gi|426362889|ref|XP_004048583.1| PREDICTED: ras-related protein Rab-14 isoform 1 [Gorilla gorilla
gorilla]
gi|426362891|ref|XP_004048584.1| PREDICTED: ras-related protein Rab-14 isoform 2 [Gorilla gorilla
gorilla]
gi|432885910|ref|XP_004074817.1| PREDICTED: ras-related protein Rab-14-like [Oryzias latipes]
gi|46577103|sp|Q91V41.3|RAB14_MOUSE RecName: Full=Ras-related protein Rab-14
gi|75054939|sp|Q5R8Z8.3|RAB14_PONAB RecName: Full=Ras-related protein Rab-14
gi|75571353|sp|Q5ZKU5.3|RAB14_CHICK RecName: Full=Ras-related protein Rab-14
gi|85700392|sp|P61106.4|RAB14_HUMAN RecName: Full=Ras-related protein Rab-14
gi|11274539|pir||T47160 hypothetical protein DKFZp762K0911.1 - human
gi|6563200|gb|AAF17194.1|AF112206_1 ras-related protein rab-14 [Homo sapiens]
gi|7328166|emb|CAB82414.1| hypothetical protein [Homo sapiens]
gi|10435483|dbj|BAB14598.1| unnamed protein product [Homo sapiens]
gi|12832884|dbj|BAB22298.1| unnamed protein product [Mus musculus]
gi|13543869|gb|AAH06081.1| RAB14, member RAS oncogene family [Homo sapiens]
gi|14290609|gb|AAH09085.1| RAB14, member RAS oncogene family [Mus musculus]
gi|19263820|gb|AAH25139.1| RAB14, member RAS oncogene family [Mus musculus]
gi|34785287|gb|AAH56648.1| RAB14, member RAS oncogene family [Mus musculus]
gi|45444739|gb|AAS64573.1| F protein-binding protein 1 [Homo sapiens]
gi|48146905|emb|CAG33675.1| RAB14 [Homo sapiens]
gi|51261919|gb|AAH79941.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|52138917|gb|AAH82642.1| LOC494665 protein [Xenopus laevis]
gi|53130638|emb|CAG31648.1| hypothetical protein RCJMB04_9b24 [Gallus gallus]
gi|55730075|emb|CAH91762.1| hypothetical protein [Pongo abelii]
gi|63087687|emb|CAI92125.1| RAB14 protein [Mus musculus]
gi|74144398|dbj|BAE36051.1| unnamed protein product [Mus musculus]
gi|74151588|dbj|BAE41143.1| unnamed protein product [Mus musculus]
gi|74214376|dbj|BAE40426.1| unnamed protein product [Mus musculus]
gi|74223093|dbj|BAE40686.1| unnamed protein product [Mus musculus]
gi|74227269|dbj|BAE38391.1| unnamed protein product [Mus musculus]
gi|74228978|dbj|BAE21957.1| unnamed protein product [Mus musculus]
gi|89269928|emb|CAJ81706.1| RAB14, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|112292987|dbj|BAF02871.1| Rab14 [Mus musculus]
gi|117645408|emb|CAL38170.1| hypothetical protein [synthetic construct]
gi|117645524|emb|CAL38228.1| hypothetical protein [synthetic construct]
gi|119607893|gb|EAW87487.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607894|gb|EAW87488.1| RAB14, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148676698|gb|EDL08645.1| RAB14, member RAS oncogene family, isoform CRA_b [Mus musculus]
gi|149038930|gb|EDL93150.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|158455025|gb|AAI03316.2| RAB14 protein [Bos taurus]
gi|165971228|gb|AAI58586.1| RAB14, member RAS oncogene family [Rattus norvegicus]
gi|193786920|dbj|BAG52243.1| unnamed protein product [Homo sapiens]
gi|261860956|dbj|BAI47000.1| RAB14, member RAS oncogene family [synthetic construct]
gi|296484316|tpg|DAA26431.1| TPA: RAB14, member RAS oncogene family [Bos taurus]
gi|344243592|gb|EGV99695.1| Ras-related protein Rab-14 [Cricetulus griseus]
gi|351698913|gb|EHB01832.1| Ras-related protein Rab-14 [Heterocephalus glaber]
gi|355567473|gb|EHH23814.1| Ras-related protein Rab-14 [Macaca mulatta]
gi|355753061|gb|EHH57107.1| Ras-related protein Rab-14 [Macaca fascicularis]
gi|380784807|gb|AFE64279.1| ras-related protein Rab-14 [Macaca mulatta]
gi|383409425|gb|AFH27926.1| ras-related protein Rab-14 [Macaca mulatta]
gi|384940268|gb|AFI33739.1| ras-related protein Rab-14 [Macaca mulatta]
gi|410217966|gb|JAA06202.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410258386|gb|JAA17160.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410308836|gb|JAA33018.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|410348640|gb|JAA40924.1| RAB14, member RAS oncogene family [Pan troglodytes]
gi|417397261|gb|JAA45664.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
gi|431900765|gb|ELK08206.1| Ras-related protein Rab-14 [Pteropus alecto]
Length = 215
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>gi|195998762|ref|XP_002109249.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190587373|gb|EDV27415.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 217
Score = 263 bits (671), Expect = 4e-68, Method: Compositional matrix adjust.
Identities = 126/202 (62%), Positives = 154/202 (76%), Gaps = 6/202 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMSDCPHTIGVEFGTRIIEVAGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+ YDITRR T+NHLSSWL DAR NPN I+L+GNKC
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMAYDITRRSTYNHLSSWLTDARNLTNPNTVIVLIGNKC 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGLL+LEASA+T +NVEEAF+ TA KI QNIQ+G+LD
Sbjct: 128 DLDSQRDVTYEEAKQFADENGLLYLEASAKTGENVEEAFLDTAKKIYQNIQDGSLDLNAA 187
Query: 182 QSGIKVGYGRGQGPSGARDGTV 203
+SG++ P+ +R T
Sbjct: 188 ESGVQ------HKPTNSRGTTT 203
>gi|63087695|emb|CAI92129.1| RAB14 protein [Mus musculus]
Length = 215
Score = 263 bits (671), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLDAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLISEPQPQREGC 213
>gi|41393147|ref|NP_958903.1| ras-related protein Rab-14 [Danio rerio]
gi|292614309|ref|XP_002662217.1| PREDICTED: ras-related protein Rab-14-like [Danio rerio]
gi|28279556|gb|AAH45374.1| RAB14, member RAS oncogene family [Danio rerio]
gi|157423545|gb|AAI53494.1| RAB14, member RAS oncogene family [Danio rerio]
gi|182890232|gb|AAI65420.1| Rab14 protein [Danio rerio]
Length = 215
Score = 262 bits (670), Expect = 5e-68, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 157/209 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ +KLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKVKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ QG + D + G C
Sbjct: 187 ESGVQHKPTAPQGGRLSSDAQPQKEGCSC 215
>gi|41053455|ref|NP_956977.1| ras-related protein Rab-14 [Danio rerio]
gi|34849498|gb|AAH58341.1| RAB14, member RAS oncogene family, like [Danio rerio]
Length = 215
Score = 262 bits (670), Expect = 6e-68, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL SWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLGSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R T QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSETQPQREGC 213
>gi|255568502|ref|XP_002525225.1| protein with unknown function [Ricinus communis]
gi|223535522|gb|EEF37191.1| protein with unknown function [Ricinus communis]
Length = 164
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 135/211 (63%), Positives = 146/211 (69%), Gaps = 47/211 (22%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKR
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKR------------------------------ 30
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
GAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 31 -----------------GAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 73
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 74 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 133
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GIKVGYG GPSG RDG+ SQ GGCCS
Sbjct: 134 ESYGIKVGYGGIPGPSGGRDGSSSQAGGCCS 164
>gi|195397826|ref|XP_002057529.1| GJ18183 [Drosophila virilis]
gi|194141183|gb|EDW57602.1| GJ18183 [Drosophila virilis]
Length = 236
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 155/209 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 28 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 87
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 88 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 147
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 148 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 207
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ + PS + + T ++ C
Sbjct: 208 ESGVQHRPSQPSRPSLSSEATHAKDQCSC 236
>gi|281345481|gb|EFB21065.1| hypothetical protein PANDA_003774 [Ailuropoda melanoleuca]
Length = 145
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 133/144 (92%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
+GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 2 SGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 61
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEG 134
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEG
Sbjct: 62 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEG 121
Query: 135 EQFAKENGLLFLEASARTAQNVEE 158
E FA+E+GL+F+E SA+TA NVEE
Sbjct: 122 EAFAREHGLIFMETSAKTASNVEE 145
>gi|410904150|ref|XP_003965555.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 262 bits (669), Expect = 8e-68, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R Q+ GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQKEGC 213
>gi|195115754|ref|XP_002002421.1| GI12880 [Drosophila mojavensis]
gi|193912996|gb|EDW11863.1| GI12880 [Drosophila mojavensis]
Length = 243
Score = 261 bits (668), Expect = 9e-68, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 155/209 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 35 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 94
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 95 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 154
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 155 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 214
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ + PS + + T ++ C
Sbjct: 215 ESGVQHRPSQPSRPSLSSEATHAKDQCSC 243
>gi|348536088|ref|XP_003455529.1| PREDICTED: ras-related protein Rab-14-like [Oreochromis niloticus]
Length = 215
Score = 261 bits (668), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 157/209 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ +KLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVEEAF++ A +I QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ QG D ++ G C
Sbjct: 187 ESGVQHKPSTLQGGRPNADNQPAKEGCSC 215
>gi|410922212|ref|XP_003974577.1| PREDICTED: ras-related protein Rab-14-like [Takifugu rubripes]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 127/212 (59%), Positives = 158/212 (74%), Gaps = 6/212 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ +KLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVEEAF++ A +I QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR---DGTVSQRGGCC 210
+SG++ + P G R D + G C
Sbjct: 187 ESGVQ---HKPSAPQGGRLNADNQAPKEGCSC 215
>gi|449269091|gb|EMC79900.1| Ras-related protein Rab-14, partial [Columba livia]
Length = 212
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 125/198 (63%), Positives = 154/198 (77%), Gaps = 3/198 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR 199
+SG++ + P G R
Sbjct: 187 ESGVQ---HKPSAPQGGR 201
>gi|346469761|gb|AEO34725.1| hypothetical protein [Amblyomma maculatum]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 151/185 (81%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ +E +QFA+ENGL+F+EASA+T ++VEEAF++TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYDEAKQFAEENGLMFVEASAKTGEHVEEAFLETAKKIFQNIQDGSLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|428175915|gb|EKX44802.1| hypothetical protein GUITHDRAFT_94864 [Guillardia theta CCMP2712]
Length = 210
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 123/202 (60%), Positives = 155/202 (76%), Gaps = 6/202 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
++Y+FKYIIIGD GVGKSCLL QFT+KRF TIG+EFG R+ ++G+ IKLQIWDT
Sbjct: 4 FEYIFKYIIIGDMGVGKSCLLQQFTEKRFPEDQPHTIGIEFGTRVCEVNGKVIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR++TRSYYRGAAGA++VYDIT R +FNHL++WL DAR H NP+ +ML+GNK D
Sbjct: 64 AGQERFRAVTRSYYRGAAGAIMVYDITTRSSFNHLATWLTDARNHTNPSTVMMLIGNKLD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A +R VS EE + FAK+NGL++LEASA+T QNVEEAF++TA KI +NIQ GALD +
Sbjct: 124 MAKQREVSFEEADAFAKDNGLIYLEASAKTGQNVEEAFLRTARKIYENIQSGALDLNAAE 183
Query: 183 SGIKVGYGR------GQGPSGA 198
SG+ R GQ P+ A
Sbjct: 184 SGVVSNRTRSNRIKAGQTPTNA 205
>gi|350534852|ref|NP_001232642.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197128799|gb|ACH45297.1| putative RAB14 member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 215
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 157/210 (74%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QF +K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFAEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>gi|116787720|gb|ABK24616.1| unknown [Picea sitchensis]
Length = 167
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 126/166 (75%), Positives = 139/166 (83%), Gaps = 2/166 (1%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
M+TID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQ
Sbjct: 1 MITIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLANWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
HAN NM+IML+GNKCDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFI TA+
Sbjct: 61 HANANMTIMLIGNKCDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFISTASM 120
Query: 167 ILQNIQEGALDAVNDQSGIKV--GYGRGQGPSGARDGTVSQRGGCC 210
I Q IQEG D N+ GIKV G G RD + SQ GGCC
Sbjct: 121 IYQKIQEGVFDVSNESYGIKVGYGGVSGAAGGAGRDASTSQSGGCC 166
>gi|427787413|gb|JAA59158.1| Putative ras-related protein rab-14 [Rhipicephalus pulchellus]
Length = 215
Score = 260 bits (665), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 150/185 (81%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ +E +QFA ENGL+F+EASA+T ++VEEAF++TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYDEAKQFADENGLMFVEASAKTGEHVEEAFLETAKKIFQNIQDGSLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|440290344|gb|ELP83770.1| GTP-binding protein YPTC4, putative [Entamoeba invadens IP1]
Length = 211
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+ Y+FK++++G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + V I G+ +KLQIWDT
Sbjct: 31 FQYVFKFVVVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTVPIQGQSVKLQIWDT 90
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGAAGALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 91 AGSEKFRSITRSYYRGAAGALLVYDISRKESFEKVPVWLEECRKYSNPNTTIMLVGNKCD 150
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ VSKEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 151 LPERQ-VSKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKSGKVTLEN 207
>gi|63087691|emb|CAI92127.1| RAB14 protein [Mus musculus]
Length = 215
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 128/210 (60%), Positives = 157/210 (74%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQ FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>gi|431891798|gb|ELK02332.1| Ras-related protein Rab-2A [Pteropus alecto]
Length = 224
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 120/144 (83%), Positives = 132/144 (91%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSY
Sbjct: 46 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSY 105
Query: 76 YRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGE 135
YRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEEGE
Sbjct: 106 YRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGE 165
Query: 136 QFAKENGLLFLEASARTAQNVEEA 159
FA+E+GL+F+E SA+TA NVEE
Sbjct: 166 AFAREHGLIFMETSAKTASNVEEV 189
>gi|291239338|ref|XP_002739577.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 216
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 126/208 (60%), Positives = 153/208 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+FLEASA+T NVE+AF++TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFADENGLMFLEASAKTGDNVEDAFLETARKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
+SG++ G P+ GC
Sbjct: 187 ESGVQHKPSTGGRPNPLNTDQQPSNEGC 214
>gi|167378077|ref|XP_001734659.1| GTP-binding protein YPTC4 [Entamoeba dispar SAW760]
gi|165903728|gb|EDR29171.1| GTP-binding protein YPTC4, putative [Entamoeba dispar SAW760]
Length = 213
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKY+I+G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + + I G+ +KLQIWDT
Sbjct: 33 YQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDT 92
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGA GALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 93 AGSEKFRSITRSYYRGATGALLVYDISRKESFEKIPIWLEECRKYSNPNTTIMLVGNKCD 152
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ V+KEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 153 LPDRQ-VTKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKNGKVTLEN 209
>gi|67482983|ref|XP_656786.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56474007|gb|EAL51401.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790082|dbj|BAD82837.1| small GTPase EhRab2C [Entamoeba histolytica]
Length = 231
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKY+I+G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + + I G+ +KLQIWDT
Sbjct: 51 YQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDT 110
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGA+GALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 111 AGSEKFRSITRSYYRGASGALLVYDISRKESFEKIPIWLEECRKYSNPNTTIMLVGNKCD 170
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ V+KEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 171 LPDRQ-VTKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKNGKVTLDN 227
>gi|17137218|ref|NP_477171.1| Rab14, isoform A [Drosophila melanogaster]
gi|2313041|dbj|BAA21709.1| rab14 [Drosophila melanogaster]
gi|7298153|gb|AAF53390.1| Rab14, isoform A [Drosophila melanogaster]
gi|297591874|gb|ADI46814.1| MIP20481p [Drosophila melanogaster]
Length = 215
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 127 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|28574177|ref|NP_788056.1| Rab14, isoform B [Drosophila melanogaster]
gi|195338419|ref|XP_002035822.1| GM15560 [Drosophila sechellia]
gi|28380366|gb|AAO41193.1| Rab14, isoform B [Drosophila melanogaster]
gi|194129702|gb|EDW51745.1| GM15560 [Drosophila sechellia]
Length = 239
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 151 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|67466375|ref|XP_649335.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56465749|gb|EAL43948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790080|dbj|BAD82836.1| small GTPase EhRab2B [Entamoeba histolytica]
gi|449708159|gb|EMD47674.1| small GTPase EhRab2B, putative [Entamoeba histolytica KU27]
Length = 213
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 144/178 (80%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKY+I+G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + + I G+ +KLQIWDT
Sbjct: 33 YQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDT 92
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGA GALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 93 AGSEKFRSITRSYYRGATGALLVYDISRKESFEKIPIWLEECRKYSNPNTTIMLVGNKCD 152
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ V+KEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 153 LPDRQ-VTKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKNGKVTLEN 209
>gi|407041380|gb|EKE40700.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449705006|gb|EMD45146.1| GTP-binding protein YPTC4, putative [Entamoeba histolytica KU27]
Length = 212
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKY+I+G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + + I G+ +KLQIWDT
Sbjct: 32 YQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDT 91
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGA+GALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 92 AGSEKFRSITRSYYRGASGALLVYDISRKESFEKIPIWLEECRKYSNPNTTIMLVGNKCD 151
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ V+KEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 152 LPDRQ-VTKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKNGKVTLDN 208
>gi|440799928|gb|ELR20971.1| Rab4, putative [Acanthamoeba castellanii str. Neff]
Length = 213
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 120/181 (66%), Positives = 146/181 (80%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+K+F P TIGVEFG R++ + G+ IKLQIW
Sbjct: 4 FPYEYIFKYIIIGDMGVGKSCLLHQFTEKKFIPDSPHTIGVEFGTRIIEVMGKKIKLQIW 63
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL+SWL DAR NPN IM++GNK
Sbjct: 64 DTAGQERFRAVTRSYYRGAAGALLVYDITRRPTYNHLTSWLTDARNLTNPNTVIMMIGNK 123
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAKENGL+FLEASA+T +NVEEAF+KTA I Q++Q+G++D +
Sbjct: 124 KDLEDQRDVTYEEASNFAKENGLIFLEASAKTGENVEEAFLKTAKLIFQSVQDGSVDVGS 183
Query: 181 D 181
D
Sbjct: 184 D 184
>gi|195033809|ref|XP_001988767.1| GH11344 [Drosophila grimshawi]
gi|193904767|gb|EDW03634.1| GH11344 [Drosophila grimshawi]
Length = 243
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 149/195 (76%), Gaps = 3/195 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 35 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 94
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 95 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 154
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 155 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 214
Query: 182 QSGIKVGYGRGQGPS 196
+SG++ R PS
Sbjct: 215 ESGVQ---HRPSQPS 226
>gi|195436943|ref|XP_002066405.1| GK18273 [Drosophila willistoni]
gi|194162490|gb|EDW77391.1| GK18273 [Drosophila willistoni]
Length = 243
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 125/195 (64%), Positives = 149/195 (76%), Gaps = 3/195 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 35 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 94
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 95 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 154
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 155 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 214
Query: 182 QSGIKVGYGRGQGPS 196
+SG++ R PS
Sbjct: 215 ESGVQ---HRPSQPS 226
>gi|167394434|ref|XP_001740967.1| GTP-binding protein YPTC4 [Entamoeba dispar SAW760]
gi|165894682|gb|EDR22590.1| GTP-binding protein YPTC4, putative [Entamoeba dispar SAW760]
Length = 212
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 145/178 (81%), Gaps = 1/178 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKY+I+G+ VGKSCLLLQF DKRFQP+HDLTIGVEFG + + I G+ +KLQIWDT
Sbjct: 32 YQYVFKYVIVGEVAVGKSCLLLQFQDKRFQPIHDLTIGVEFGTKTIPIQGQSVKLQIWDT 91
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG E FRSITRSYYRGA+GALLVYDI+R+E+F + WLE+ R+++NPN +IMLVGNKCD
Sbjct: 92 AGSEKFRSITRSYYRGASGALLVYDISRKESFEKIPIWLEECRKYSNPNTTIMLVGNKCD 151
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
L R+ V+KEEGE FAKENGLLFLEASAR A NV+ F++TA I +N++ G + N
Sbjct: 152 LPDRQ-VTKEEGEAFAKENGLLFLEASARDATNVDNCFLQTAEVIFENVKTGKVTLDN 208
>gi|194758573|ref|XP_001961536.1| GF14883 [Drosophila ananassae]
gi|190615233|gb|EDV30757.1| GF14883 [Drosophila ananassae]
Length = 239
Score = 259 bits (661), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 151 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|390333617|ref|XP_001198666.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
gi|390369429|ref|XP_001198716.2| PREDICTED: ras-related protein Rab-14-like [Strongylocentrotus
purpuratus]
Length = 215
Score = 258 bits (660), Expect = 7e-67, Method: Compositional matrix adjust.
Identities = 123/185 (66%), Positives = 148/185 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +VEEAF+ TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGDHVEEAFLDTAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|195474015|ref|XP_002089287.1| GE19031 [Drosophila yakuba]
gi|194175388|gb|EDW88999.1| GE19031 [Drosophila yakuba]
Length = 239
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 151 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|195164876|ref|XP_002023272.1| GL21269 [Drosophila persimilis]
gi|198473182|ref|XP_001356197.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
gi|194105357|gb|EDW27400.1| GL21269 [Drosophila persimilis]
gi|198139340|gb|EAL33257.2| GA18036 [Drosophila pseudoobscura pseudoobscura]
Length = 239
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 151 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|320168221|gb|EFW45120.1| RAB14 protein [Capsaspora owczarzaki ATCC 30864]
Length = 212
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 148/185 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F P TIGVEFG R++ ++G+ IKLQIWD
Sbjct: 5 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFLPDCPHTIGVEFGTRIIEVNGQKIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYD+TRR T+NHLSSWL DAR NPN +I L+GNK
Sbjct: 65 TAGQERFRAVTRSYYRGAAGALMVYDVTRRSTYNHLSSWLTDARNLTNPNTTIFLIGNKS 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE ++FA +NGL FLEASA+T NVEE+FI+TA I QNIQ G+LD
Sbjct: 125 DLESQRDVTYEEAKKFADDNGLTFLEASAKTGANVEESFIETAKTIFQNIQNGSLDLNAA 184
Query: 182 QSGIK 186
+SG++
Sbjct: 185 ESGVQ 189
>gi|156390648|ref|XP_001635382.1| predicted protein [Nematostella vectensis]
gi|156222475|gb|EDO43319.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLF EASA+T +NVE+AF++TA KI QNIQ+G+LD
Sbjct: 128 DLDAQRDVTYEEAKQFAEENGLLFCEASAKTGENVEDAFLETAKKIYQNIQDGSLDLNAA 187
Query: 182 QSGIK 186
+SG++
Sbjct: 188 ESGVQ 192
>gi|28574179|ref|NP_788057.1| Rab14, isoform C [Drosophila melanogaster]
gi|28380367|gb|AAO41194.1| Rab14, isoform C [Drosophila melanogaster]
gi|157816819|gb|ABV82401.1| RH10422p [Drosophila melanogaster]
Length = 233
Score = 258 bits (660), Expect = 8e-67, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 25 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 84
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 85 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 144
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 145 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 204
Query: 182 QSGIK 186
+SG++
Sbjct: 205 ESGVQ 209
>gi|403221236|dbj|BAM39369.1| Rab GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 258 bits (660), Expect = 9e-67, Method: Compositional matrix adjust.
Identities = 127/210 (60%), Positives = 155/210 (73%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLL+FTDKRF+P HDLTIGVEFG R +T+ G IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLV+DI+RR TF+HL+ WLE+ R H +P M+I+L+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFDHLTKWLEEVRDHGSPTMTIILIGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A R V EG+QFA++N L+++E SA+ NVE AF+ TA I +N++ G D +
Sbjct: 124 VA-TREVEYHEGKQFAEQNDLIYMETSAKGDYNVEAAFLTTAEMIYENVKNGLFDIESGV 182
Query: 183 SGIKVG--YGRGQGPSGARDGTVSQRGGCC 210
G+K G + P RDG S CC
Sbjct: 183 QGVKRGPITISQRRPVPFRDGAGSFNIHCC 212
>gi|403362162|gb|EJY80798.1| Rab GTPase 2d [Oxytricha trifallax]
Length = 230
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 118/187 (63%), Positives = 150/187 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FK+I++GD+ VGKSCLLLQFTDKRF+ HDLTIGVEFG+R V ++ + +KLQIWD
Sbjct: 6 TYSYVFKFIVVGDSSVGKSCLLLQFTDKRFKATHDLTIGVEFGSRTVQVNNQNVKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRG+ GALLVYDIT+R++F +L WLE+ +++A M+I+LVGNK
Sbjct: 66 TAGQESFRSITRSYYRGSIGALLVYDITKRQSFENLVRWLEEMKENAYSKMTIILVGNKA 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL + R VS EEG+QFAK+N L+F E SA+TA NVEEAF+ TA I +NI+ G D N+
Sbjct: 126 DLDNEREVSFEEGQQFAKKNNLMFFETSAKTAMNVEEAFLTTAGIISKNIERGEYDLSNE 185
Query: 182 QSGIKVG 188
GIK G
Sbjct: 186 SIGIKPG 192
>gi|71033513|ref|XP_766398.1| hypothetical protein [Theileria parva strain Muguga]
gi|68353355|gb|EAN34115.1| GTP-binding protein rab2, putative [Theileria parva]
Length = 215
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 156/214 (72%), Gaps = 9/214 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLL+FTDKRF+P HDLTIGVEFG R +T+ G IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLV+DI+RR TF HL+ WLE+ R H +P MSI+L+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTKWLEEVRDHGSPTMSIILIGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A R V EG+QFA +N L+++E SA+ NVE AF+ TA I +N++ G D +
Sbjct: 124 VASRE-VEYHEGKQFADQNDLIYMETSAKGDYNVEAAFLTTAELIYENVKNGLFDIESGV 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG-----CCS 211
G+K G G S R+ ++ GG CC+
Sbjct: 183 QGVKRG---PMGVSSRRNISLRDGGGFLNLSCCA 213
>gi|301299077|gb|ADK66883.1| Rab14 [Aiptasia pulchella]
Length = 217
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 149/185 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLF EASA+T +NVE+AF++TA KI QNIQ+G+LD
Sbjct: 128 DLDAQRDVTYEEAKQFAEENGLLFCEASAKTGENVEDAFLETAKKIYQNIQDGSLDLNAA 187
Query: 182 QSGIK 186
+SG++
Sbjct: 188 ESGVQ 192
>gi|225709986|gb|ACO10839.1| Ras-related protein Rab-14 [Caligus rogercresseyi]
Length = 217
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 120/193 (62%), Positives = 151/193 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y ++FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSFIFKYIIIGDMGVGKSCLLHQFTEKKFLSDCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGA+LVYD+TRR T+NHLSSWL DAR NPN I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGAILVYDVTRRHTYNHLSSWLTDARNLTNPNTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R VS EE QFA+ENGL+F+EASA+T Q+VE+AF++TA K+ N+Q+G+LD
Sbjct: 127 DLEAQRDVSHEEARQFAEENGLMFVEASAKTGQHVEDAFLETAKKVYHNVQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQG 194
+SG++ G G
Sbjct: 187 ESGVQQKAGSLNG 199
>gi|225713938|gb|ACO12815.1| Ras-related protein Rab-14 [Lepeophtheirus salmonis]
Length = 219
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 149/185 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y ++FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSFIFKYIIIGDMGVGKSCLLHQFTEKKFLSDCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGA+LVYD+TRR T+NHLSSWL DAR NPN I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGAILVYDVTRRHTYNHLSSWLTDARNLTNPNTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R VS EE QFA+ENGL+F+EASA+T Q+VE+AF++TA K+ N+Q+G+LD
Sbjct: 127 DLEGQRDVSHEEARQFAEENGLMFVEASAKTGQHVEDAFLETAKKVYHNVQDGSLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|340378920|ref|XP_003387975.1| PREDICTED: ras-related protein Rab-14-like [Amphimedon
queenslandica]
Length = 220
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/214 (59%), Positives = 154/214 (71%), Gaps = 5/214 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+V + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE + FA ENGLLFLEASA+T NVE+ FI+TA KI QNIQ+G +D
Sbjct: 127 DLDGQRDVTYEEAKTFADENGLLFLEASAKTGDNVEDVFIETAKKIYQNIQDGNVDLNAA 186
Query: 182 QSGIKVGYGRGQG-----PSGARDGTVSQRGGCC 210
+G+++ G P+G + S GCC
Sbjct: 187 DTGVQLKPSASGGSGDRKPTGNQSSQQSGGKGCC 220
>gi|145496190|ref|XP_001434086.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831499|emb|CAI39317.1| rab_C12 [Paramecium tetraurelia]
gi|124401209|emb|CAK66689.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 125/223 (56%), Positives = 160/223 (71%), Gaps = 13/223 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+I+IGDTGVGKSCLLLQF DKRF+ H++TIGVEFGA+++ +DG IKLQIW
Sbjct: 1 MSYSYLFKFILIGDTGVGKSCLLLQFIDKRFRQKHEVTIGVEFGAKLIELDGLNIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYR AAGA++VYDIT+RE++ +++ W+E+ +Q+ NP +S++LVGNK
Sbjct: 61 DTAGQESFRSITRSYYRSAAGAIVVYDITKRESYENVARWMEEVKQNGNPKLSMLLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS E +QFAKE G+ F E SA+TA NVEE FIK A IL+ I G +D N
Sbjct: 121 GDLESDRQVSYNEAQQFAKECGIEFFETSAKTANNVEEIFIKMAQIILEKINLGQIDPKN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGT-------------VSQRGGCC 210
+ GIK+G + G ++ T + GGCC
Sbjct: 181 ENFGIKLGSEQVNYSHGNQNITNLEQQQEYQPYEEKKKSGGCC 223
>gi|405963182|gb|EKC28779.1| Ras-related protein Rab-14 [Crassostrea gigas]
Length = 214
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 151/208 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+FLE SA+T NVE+AF+ TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFADENGLMFLECSAKTGDNVEDAFLDTAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
+SG++ + P + + C
Sbjct: 187 ESGVQHKPATPRNPINTDQAPIDKGCAC 214
>gi|47208089|emb|CAF90842.1| unnamed protein product [Tetraodon nigroviridis]
Length = 435
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 120/148 (81%), Positives = 132/148 (89%)
Query: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRS 70
+ G GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRS
Sbjct: 87 LAGSAGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRS 146
Query: 71 ITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVS 130
ITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V
Sbjct: 147 ITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVK 206
Query: 131 KEEGEQFAKENGLLFLEASARTAQNVEE 158
KEEGE FA+E+GL+F+E SA A NVEE
Sbjct: 207 KEEGEAFAREHGLIFMENSAMYASNVEE 234
>gi|321452621|gb|EFX63965.1| hypothetical protein DAPPUDRAFT_231914 [Daphnia pulex]
Length = 215
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 127/206 (61%), Positives = 157/206 (76%), Gaps = 6/206 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGALLVYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALLVYDITRRSTYNHLSSWLSDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+EN LLF+EASA+T NVE+AF++TA KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENELLFIEASAKTGDNVEDAFLETAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIK---VGYGRGQG---PSGARDG 201
+SG++ + GR Q P+ ++G
Sbjct: 187 ESGVQHKPLQPGRSQPQNTPNPTKEG 212
>gi|17862462|gb|AAL39708.1| LD29476p [Drosophila melanogaster]
Length = 215
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYNYIFKYIIIGDMGVGKSCLLHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSY+RGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYHRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 127 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|84998352|ref|XP_953897.1| Rab GTPAse [Theileria annulata]
gi|65304895|emb|CAI73220.1| Rab GTPAse, putative [Theileria annulata]
Length = 210
Score = 257 bits (656), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 148/196 (75%), Gaps = 7/196 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLL+FTDKRF+P HDLTIGVEFG R +T+ G IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVQGEQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLV+DI+RR TF HL+ WLE+ R H +P MSI+L+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTKWLEEVRDHGSPTMSIILIGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A R V EG+QFA +N L+++E SA+ NVE AF+ TA I +N++ G D +
Sbjct: 124 VASRE-VEYHEGKQFADQNDLIYMETSAKGDYNVEAAFLTTAELIYENVKNGLFDIESGV 182
Query: 183 SGIKVGYGRGQGPSGA 198
G+K +GP G
Sbjct: 183 QGVK------RGPMGV 192
>gi|195579198|ref|XP_002079449.1| GD23961 [Drosophila simulans]
gi|194191458|gb|EDX05034.1| GD23961 [Drosophila simulans]
Length = 239
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 121/185 (65%), Positives = 145/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSCL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYNYIFKYIIIGDMGVGKSCLRHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 151 DLESTREVTYEEAKEFADENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|198425794|ref|XP_002126763.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 214
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 122/185 (65%), Positives = 147/185 (79%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKG 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGLLFLEASA+T NVE+ F++TA KI QNIQ+G+LD
Sbjct: 127 DLDGQRDVTYEEAKQFADENGLLFLEASAKTGDNVEDVFLETAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|359497616|ref|XP_003635585.1| PREDICTED: ras-related protein RABB1c-like, partial [Vitis
vinifera]
gi|296088956|emb|CBI38522.3| unnamed protein product [Vitis vinifera]
Length = 149
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 121/149 (81%), Positives = 132/149 (88%)
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NMSIML+GNKCD
Sbjct: 1 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMSIMLIGNKCD 60
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LAHRRAVS EEGEQFAKENGL+F+EASA+TAQNVEEAF+KTAA I + IQ+G D N+
Sbjct: 61 LAHRRAVSTEEGEQFAKENGLIFMEASAKTAQNVEEAFVKTAATIYKKIQDGVFDVSNES 120
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
GIKVGYG GPSG RDG+ SQ GGCC+
Sbjct: 121 QGIKVGYGGIPGPSGGRDGSSSQAGGCCN 149
>gi|336391093|ref|NP_001229573.1| ras-related protein Rab-2A isoform b [Homo sapiens]
gi|332213900|ref|XP_003256068.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Nomascus
leucogenys]
gi|402878331|ref|XP_003902846.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Papio anubis]
gi|194387202|dbj|BAG59967.1| unnamed protein product [Homo sapiens]
Length = 188
Score = 256 bits (653), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 143/188 (76%), Gaps = 24/188 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGV------------------------EFGARMITIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 97 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 156
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 157 EANGIKIG 164
>gi|428673102|gb|EKX74015.1| Ras-related protein rab2 small GTP-binding protein [Babesia equi]
Length = 215
Score = 255 bits (652), Expect = 6e-66, Method: Compositional matrix adjust.
Identities = 125/217 (57%), Positives = 157/217 (72%), Gaps = 15/217 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFKYIIIGDTGVGKSCLLL+FTDKRF+P HDLTIGVEFG R +T+DG IKLQIWDT
Sbjct: 4 YKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRFITVDGEQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRGAAGALLV+DI+RR TF+HL+ WLE+ R + +P M+I+L+GNK D
Sbjct: 64 AGQESFRSITRSYYRGAAGALLVFDISRRSTFDHLTKWLEEVRDNGSPTMTIILIGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A R V EG++FA +N L+++E SA+ NVE AF+ TA I +N++ G D +
Sbjct: 124 VATRE-VEYHEGKKFADQNNLIYMETSAKGDYNVEAAFLTTAEMIYENVKNGLFDTDSGV 182
Query: 183 SGIKVGYGRGQGPSG--------ARDGTVSQRGGCCS 211
G+K +GP G R+G+ CC+
Sbjct: 183 QGVK------KGPIGLQSRRYVNVREGSGFLSLSCCA 213
>gi|324505695|gb|ADY42443.1| Ras-related protein Rab-14 [Ascaris suum]
Length = 213
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 125/201 (62%), Positives = 151/201 (75%), Gaps = 1/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE + FA ENGL FLE SA+T NVE+AF+ TA KI QNIQ+G+LD
Sbjct: 128 DLDGQRDVTYEEAKTFADENGLTFLECSAKTGDNVEDAFLDTARKIYQNIQDGSLDLNQA 187
Query: 182 QSGIKVGYGRGQ-GPSGARDG 201
+G++ + PSGA+DG
Sbjct: 188 DTGVQPKQNLPRTAPSGAQDG 208
>gi|395859794|ref|XP_003802216.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Otolemur
garnettii]
Length = 188
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 143/188 (76%), Gaps = 24/188 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGV------------------------EFGARMITIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 97 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 156
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 157 EANGIKIG 164
>gi|349929498|dbj|GAA28715.1| Ras-related protein Rab-2A, partial [Clonorchis sinensis]
Length = 201
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 126/186 (67%), Positives = 146/186 (78%), Gaps = 6/186 (3%)
Query: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYY 76
VGKSCLLLQFTD+RFQ V+DLTIGVEFGARM+T+D + IKLQIWDTAGQESFRSITRSYY
Sbjct: 1 VGKSCLLLQFTDRRFQAVYDLTIGVEFGARMITVDKKQIKLQIWDTAGQESFRSITRSYY 60
Query: 77 RGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQ 136
RGAAGALLVYD+TRR+TF+HL+SWLEDARQ A+ +M I LVGNKCDL RR V ++E E
Sbjct: 61 RGAAGALLVYDVTRRDTFSHLASWLEDARQRASSSMVITLVGNKCDLDSRREVGRDEAEA 120
Query: 137 FAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND------QSGIKVGYG 190
FA+E+GLLF E SA+T NVEEAF TA I + +QEG LD N+ QS + YG
Sbjct: 121 FAREHGLLFTETSAKTGINVEEAFACTARAIYERLQEGLLDINNEILPNLQQSFTNLHYG 180
Query: 191 RGQGPS 196
R S
Sbjct: 181 RANCTS 186
>gi|156086828|ref|XP_001610821.1| Rab2 [Babesia bovis T2Bo]
gi|32492052|gb|AAP85298.1| Rab2 [Babesia bovis]
gi|154798074|gb|EDO07253.1| Rab2 [Babesia bovis]
Length = 217
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 125/220 (56%), Positives = 155/220 (70%), Gaps = 18/220 (8%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYIIIGDTGVGKSCLLL+FTDKRF+P HDLTIGVEFG R++ + G IKLQIWD
Sbjct: 3 SYKYLFKYIIIGDTGVGKSCLLLRFTDKRFKPDHDLTIGVEFGTRLINVKGDTIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRGAAGALLV+DI+RR TF HL+ WL++ + H +P M+I+L+GNK
Sbjct: 63 TAGQESFRSITRSYYRGAAGALLVFDISRRSTFEHLTRWLDEVKDHGSPTMTIVLIGNKT 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ ++R V EG+ FA EN L+++E SA+ NVEEAF+ TA I N+ G D
Sbjct: 123 DV-NKREVEYHEGKAFADENNLIYMETSAKGDYNVEEAFLTTATMIYDNVNRGMFDV--- 178
Query: 182 QSGIKVGYGRGQGPSGA-----------RDGTVSQRGGCC 210
SG+ YG +GP ++G+ G CC
Sbjct: 179 DSGV---YGVKKGPQATVNSMRRSINLRQNGSGFFSGACC 215
>gi|237820631|ref|NP_001153783.1| Rab-protein 14 [Tribolium castaneum]
Length = 215
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 147/185 (79%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +FA+ENGL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLEGQRDVTYEEASKFAEENGLMFVEASAKTGDNVEEAFLETAKKIYQSIQDGRLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|399217489|emb|CCF74376.1| unnamed protein product [Babesia microti strain RI]
Length = 386
Score = 254 bits (649), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 157/210 (74%), Gaps = 12/210 (5%)
Query: 2 SYDYLFKYIIIGDTG-------VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP 54
+Y YL K+IIIGDTG VGKSCLLLQFTDKRF+ HDLTIGVEFGAR+++I G P
Sbjct: 163 AYKYLLKFIIIGDTGNETIDLGVGKSCLLLQFTDKRFRANHDLTIGVEFGARIISIQGTP 222
Query: 55 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSI 114
IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDI RRETF+HLS WL++ R ++ +MSI
Sbjct: 223 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIGRRETFDHLSKWLQEVRDNSTVSMSI 282
Query: 115 MLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG 174
+L+GNK DL+ R V EEG++FA NGL FLE SA++A NVE+AF+ A +IL I+
Sbjct: 283 ILIGNKSDLS-AREVEYEEGKRFADSNGLFFLETSAKSACNVEKAFVCIAEEILSKIERN 341
Query: 175 ALDAVNDQSGIKVGYGRGQGPSGARDGTVS 204
D +D GIK RG +G R +++
Sbjct: 342 IFDLDSDSHGIK----RGPNYTGRRRSSIT 367
>gi|410961830|ref|XP_003987481.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Felis catus]
Length = 192
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 152/216 (70%), Gaps = 30/216 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 157 EANGIKIGPQQCISTSVGPSASQRSSSEIGSNSGCC 192
>gi|332841824|ref|XP_509819.3| PREDICTED: ras-related protein Rab-2B isoform 3 [Pan troglodytes]
gi|426376306|ref|XP_004054945.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Gorilla gorilla
gorilla]
gi|441667225|ref|XP_004091958.1| PREDICTED: ras-related protein Rab-2B [Nomascus leucogenys]
Length = 192
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 152/216 (70%), Gaps = 30/216 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 157 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 192
>gi|350586941|ref|XP_003482310.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Sus scrofa]
Length = 192
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 152/216 (70%), Gaps = 30/216 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ T + GCC
Sbjct: 157 EANGIKIGPQQCISTSVGPSASQRSTRDMGSDSGCC 192
>gi|89258425|gb|ABD65436.1| Rab14 [Suberites domuncula]
Length = 189
Score = 253 bits (647), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 120/176 (68%), Positives = 141/176 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+V + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
DL +R V+ EE +QFA ENGLLF+EASA+T NVE+ FI+TA KI QNIQ+G +D
Sbjct: 127 DLEGQRDVTYEEAKQFADENGLLFMEASAKTGDNVEDVFIETAKKIYQNIQDGNVD 182
>gi|383856683|ref|XP_003703837.1| PREDICTED: ras-related protein Rab-2-like [Megachile rotundata]
Length = 190
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 125/188 (66%), Positives = 143/188 (76%), Gaps = 24/188 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGV EFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGV------------------------EFGARMITIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 37 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA I + IQEG D N
Sbjct: 97 SDLDNRREVKREEGETFAREHGLVFMETSAKTAANVEEAFINTAKVIYEKIQEGVFDINN 156
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 157 EANGIKIG 164
>gi|403264896|ref|XP_003924702.1| PREDICTED: ras-related protein Rab-2B [Saimiri boliviensis
boliviensis]
Length = 186
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 134/217 (61%), Positives = 151/217 (69%), Gaps = 38/217 (17%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 C-DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
DL LF +AFI TA +I + IQ+G D
Sbjct: 121 SYDLC-------------------LF------------QAFINTAKEIYRKIQQGLFDVH 149
Query: 180 NDQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
N+ +GIK+G GPS ++ + + GCC
Sbjct: 150 NEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 186
>gi|348577587|ref|XP_003474565.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Cavia
porcellus]
Length = 192
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 132/218 (60%), Positives = 151/218 (69%), Gaps = 34/218 (15%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG--------YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G G G P +RD GCC
Sbjct: 157 EANGIKIGPQQSIATSAGPGACPRNSRD--TGSDSGCC 192
>gi|345780982|ref|XP_003432061.1| PREDICTED: ras-related protein Rab-2B [Canis lupus familiaris]
Length = 192
Score = 253 bits (647), Expect = 3e-65, Method: Compositional matrix adjust.
Identities = 130/216 (60%), Positives = 152/216 (70%), Gaps = 30/216 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 157 EANGIKIGPQQCISASVGPSASQRSSNEIGSNSGCC 192
>gi|426232814|ref|XP_004010415.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Ovis aries]
Length = 192
Score = 253 bits (646), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 131/216 (60%), Positives = 153/216 (70%), Gaps = 30/216 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 156
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ G+ + GCC
Sbjct: 157 EANGIKIGPQQCISTPVGPSASQRGSHDMGADSGCC 192
>gi|357612414|gb|EHJ67983.1| Rab-protein 14 [Danaus plexippus]
Length = 213
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 120/185 (64%), Positives = 147/185 (79%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+F+EASA+T QNVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLDGQRDVTYEEAKQFADENGLMFVEASAKTGQNVEEAFLETAKKIYQSIQDGRLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|170037321|ref|XP_001846507.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
gi|167880416|gb|EDS43799.1| GTP-binding protein YPTC4 [Culex quinquefasciatus]
Length = 215
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 145/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+F EASA T QNVEEAF++TA KI Q+IQ+G LD +
Sbjct: 127 DLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLDLNSS 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|242007549|ref|XP_002424602.1| predicted protein [Pediculus humanus corporis]
gi|212508045|gb|EEB11864.1| predicted protein [Pediculus humanus corporis]
Length = 215
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 119/209 (56%), Positives = 155/209 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYI+IGD GVGKSCLL QFT+K+F T+GVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYILIGDMGVGKSCLLHQFTEKKFMSDCHHTLGVEFGTRVIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLS+WL D R NP+ I L+GNKC
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSNWLTDTRNLTNPSTVIFLIGNKC 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGL+F+EASA+T +NVEEAF++TA KI Q+I +G LD
Sbjct: 127 DLNQQRDVTYEEAKQFAEENGLMFVEASAKTGENVEEAFLETANKIYQSIIDGRLDPNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+SG++ + + D + S+ C
Sbjct: 187 ESGVQHKATQPGRSTAVNDQSPSKENCSC 215
>gi|383863388|ref|XP_003707163.1| PREDICTED: ras-related protein Rab-14-like [Megachile rotundata]
Length = 218
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 156/207 (75%), Gaps = 1/207 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLEGQRDVTYEEAKQFADENGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGG 208
+SG++ + QG + + + Q+GG
Sbjct: 187 ESGVQHNPSQ-QGRTNLQGVSNEQQGG 212
>gi|345807059|ref|XP_003435547.1| PREDICTED: ras-related protein Rab-2A-like [Canis lupus familiaris]
Length = 189
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 123/188 (65%), Positives = 144/188 (76%), Gaps = 24/188 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGV------------------------EFGARMITIDGKRIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDAR ++N NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARHYSNSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V+KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG LD N
Sbjct: 97 SDLESRREVNKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVLDINN 156
Query: 181 DQSGIKVG 188
+ +G+K+G
Sbjct: 157 EANGVKIG 164
>gi|157135158|ref|XP_001656549.1| ras-related protein Rab, putative [Aedes aegypti]
gi|108870279|gb|EAT34504.1| AAEL013252-PC [Aedes aegypti]
Length = 215
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 145/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+F EASA T QNVEEAF++TA KI Q+IQ+G LD +
Sbjct: 127 DLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLDLNSS 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|193211445|ref|NP_001123226.1| Rab-protein 14 [Nasonia vitripennis]
Length = 218
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLDEQRDVTYEEAKQFADENGLMFVEASAKTGDNVEEAFLETAKKIFQSIQDGRLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|66557450|ref|XP_397056.2| PREDICTED: ras-related protein Rab-14 isoform 1 [Apis mellifera]
gi|340722550|ref|XP_003399667.1| PREDICTED: ras-related protein Rab-14-like [Bombus terrestris]
gi|350418542|ref|XP_003491891.1| PREDICTED: ras-related protein Rab-14-like [Bombus impatiens]
gi|380012102|ref|XP_003690127.1| PREDICTED: ras-related protein Rab-14-like [Apis florea]
Length = 218
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA ENGL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLEGQRDVTYEEAKQFADENGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|328872116|gb|EGG20483.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 206
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 145/181 (80%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P + TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDNPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTNWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF+KTA I Q++QEG +D +
Sbjct: 123 KDLDGQRDVTYEEASTFAKQNGLIFVESSAKTGENVEEAFLKTARLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>gi|281209756|gb|EFA83924.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 207
Score = 252 bits (643), Expect = 7e-65, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 145/181 (80%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P + TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDNPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTNWLTDARNLTNPNTIIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF++TA I Q++QEG +D +
Sbjct: 123 KDLEGQRDVTYEEASTFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>gi|403183345|gb|EAT34505.2| AAEL013252-PB [Aedes aegypti]
Length = 239
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 145/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 31 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 90
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 91 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 150
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE ++FA ENGL+F EASA T QNVEEAF++TA KI Q+IQ+G LD +
Sbjct: 151 DLESTREVTYEEAKKFADENGLMFAEASAMTGQNVEEAFLETARKIYQSIQDGRLDLNSS 210
Query: 182 QSGIK 186
+SG++
Sbjct: 211 ESGVQ 215
>gi|330802011|ref|XP_003289015.1| hypothetical protein DICPUDRAFT_92215 [Dictyostelium purpureum]
gi|325080945|gb|EGC34480.1| hypothetical protein DICPUDRAFT_92215 [Dictyostelium purpureum]
Length = 212
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 117/181 (64%), Positives = 144/181 (79%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF+KTA I Q++QEG +D +
Sbjct: 123 KDLDGQRDVTFEEASAFAKQNGLIFVESSAKTGENVEEAFLKTAKLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>gi|414969|gb|AAA80151.1| Rab4 [Dictyostelium discoideum]
Length = 205
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 144/181 (79%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF++TA I Q++QEG +D +
Sbjct: 123 KDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>gi|66813122|ref|XP_640740.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|110282987|sp|P36410.2|RAB14_DICDI RecName: Full=Ras-related protein Rab-14; AltName: Full=Rab4-like
GTPase
gi|60468753|gb|EAL66754.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 206
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 144/181 (79%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF++TA I Q++QEG +D +
Sbjct: 123 KDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>gi|391339468|ref|XP_003744071.1| PREDICTED: ras-related protein Rab-14-like [Metaseiulus
occidentalis]
Length = 214
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 119/185 (64%), Positives = 144/185 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMSDCPHTIGVEFGTRIIEVAGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYD+TRR T+NHLSSWL DAR NPN I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDVTRRSTYNHLSSWLTDARNLTNPNTVIFLIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE +QFA ENGL+FLE SA+T VE+AF++TA KI QNIQ+G LD
Sbjct: 128 DLEAQREVPYEEAKQFADENGLMFLECSAKTGDRVEDAFLETARKIYQNIQDGNLDLNAA 187
Query: 182 QSGIK 186
+SG++
Sbjct: 188 ESGVQ 192
>gi|414586804|tpg|DAA37375.1| TPA: hypothetical protein ZEAMMB73_822707 [Zea mays]
Length = 163
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 116/143 (81%), Positives = 129/143 (90%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
M+ ID +PIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQ
Sbjct: 1 MINIDNKPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
HAN NM+IMLVGNKCDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA
Sbjct: 61 HANANMTIMLVGNKCDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGA 120
Query: 167 ILQNIQEGALDAVNDQSGIKVGY 189
I + IQ+G D N+ GIKVGY
Sbjct: 121 IYKKIQDGVFDVSNESYGIKVGY 143
>gi|395502996|ref|XP_003755859.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Sarcophilus
harrisii]
Length = 192
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 124/188 (65%), Positives = 142/188 (75%), Gaps = 24/188 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGV EFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGV------------------------EFGARMVNIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 97 SDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYRKIQQGLFDVNN 156
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 157 EANGIKIG 164
>gi|326434122|gb|EGD79692.1| small GTP binding protein RAB14 [Salpingoeca sp. ATCC 50818]
Length = 211
Score = 251 bits (640), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/211 (57%), Positives = 153/211 (72%), Gaps = 6/211 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
+Y Y+FKYIIIGD GVGKSCLL QF +K+F TIGVEFG R++ + G+ IKLQIW
Sbjct: 6 FNYSYIFKYIIIGDMGVGKSCLLHQFIEKKFLTDCPHTIGVEFGTRIIEVCGQKIKLQIW 65
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAG LLVYD+ RR TFNHL +WL DAR NP+ I L+GNK
Sbjct: 66 DTAGQERFRAVTRSYYRGAAGVLLVYDVARRSTFNHLQTWLNDARALTNPSTVIFLIGNK 125
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V +E +QFA++NGL+FLE SA+T +NVEEAF++TA +I QNIQ+G+LD
Sbjct: 126 VDLEEQRDVQTDEAKQFAEQNGLVFLETSAKTGENVEEAFLETAKQIFQNIQDGSLDLNT 185
Query: 181 DQSGIKVGYGRGQGPSGA-RDGTVSQRGGCC 210
+SG++ + P GA +GGCC
Sbjct: 186 AESGVQ-----QKAPVGADMLSKPPSKGGCC 211
>gi|332029969|gb|EGI69794.1| Ras-related protein Rab-14 [Acromyrmex echinatior]
Length = 218
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA E+GL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 127 DLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLDLNAA 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|17568765|ref|NP_510572.1| Protein RAB-14 [Caenorhabditis elegans]
gi|3878422|emb|CAB01884.1| Protein RAB-14 [Caenorhabditis elegans]
Length = 210
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DA+ NPN +I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FA+ENGL FLE SA+T NVE+AF++TA +I QNIQ+G+LD
Sbjct: 127 DLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAA 186
Query: 182 QSGI--KVGYGRGQGPSGARD 200
+G+ K R +G +D
Sbjct: 187 DTGVQPKQNLPRAAENNGKKD 207
>gi|443730966|gb|ELU16260.1| hypothetical protein CAPTEDRAFT_153157 [Capitella teleta]
Length = 217
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/188 (64%), Positives = 146/188 (77%), Gaps = 3/188 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITR---RETFNHLSSWLEDARQHANPNMSIMLVG 118
TAGQE FR++TRSYYRGAAGAL+VYDIT R T+NHLSSWL DAR NPN I L+G
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITTFIVRSTYNHLSSWLTDARNLTNPNTVIFLIG 126
Query: 119 NKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
NK DL +R V+ EE +QFA ENGL+FLE SA+T +NVEEAF+ TA KI QNIQ+G+LD
Sbjct: 127 NKSDLEAQRDVTYEEAKQFADENGLMFLECSAKTGENVEEAFLDTAKKIYQNIQDGSLDL 186
Query: 179 VNDQSGIK 186
+SG++
Sbjct: 187 NAAESGVQ 194
>gi|399163157|gb|AFP33154.1| rab-14, partial [Caenorhabditis elegans]
Length = 209
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/201 (60%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 6 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DA+ NPN +I L+GNK
Sbjct: 66 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FA+ENGL FLE SA+T NVE+AF++TA +I QNIQ+G+LD
Sbjct: 126 DLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAA 185
Query: 182 QSGI--KVGYGRGQGPSGARD 200
+G+ K R +G +D
Sbjct: 186 DTGVQPKQNLPRAAENNGKKD 206
>gi|268581947|ref|XP_002645957.1| C. briggsae CBR-RAB-14 protein [Caenorhabditis briggsae]
Length = 210
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYD+TRR T+NHLSSWL DA+ NPN +I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDMTRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FA+ENGL FLE SA+T NVE+AF++TA +I QNIQ+G+LD
Sbjct: 127 DLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIFQNIQDGSLDLNAA 186
Query: 182 QSGI--KVGYGRGQGPSGARD 200
+G+ K R +G +D
Sbjct: 187 DTGVQPKQNLPRAAENNGKKD 207
>gi|322793255|gb|EFZ16912.1| hypothetical protein SINV_14392 [Solenopsis invicta]
Length = 265
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 118/185 (63%), Positives = 146/185 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 54 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 113
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 114 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 173
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA E+GL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD
Sbjct: 174 DLEGQRDVTYEEAKQFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLDLNAA 233
Query: 182 QSGIK 186
+SG++
Sbjct: 234 ESGVQ 238
>gi|241828734|ref|XP_002414734.1| RAS-related protein, putative [Ixodes scapularis]
gi|215508946|gb|EEC18399.1| RAS-related protein, putative [Ixodes scapularis]
Length = 218
Score = 249 bits (636), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 120/187 (64%), Positives = 147/187 (78%), Gaps = 2/187 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFN--HLSSWLEDARQHANPNMSIMLVGN 119
TAGQE FR++TRSYYRGAAGAL+VYDITR F+ HLSSWL DAR PN I L+GN
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRCAPFHIQHLSSWLTDARNSPTPNTVIFLIGN 127
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
KCDL +R V+ EE +QFA ENGL+F+EASA+T Q+VEEAF++TA KI QNIQ+G+LD
Sbjct: 128 KCDLEAQRDVTYEEAKQFADENGLMFVEASAKTGQHVEEAFLETAKKIYQNIQDGSLDLN 187
Query: 180 NDQSGIK 186
+SG++
Sbjct: 188 AAESGVQ 194
>gi|357514597|ref|XP_003627587.1| Ras-related protein Rab-2-A [Medicago truncatula]
gi|355521609|gb|AET02063.1| Ras-related protein Rab-2-A [Medicago truncatula]
Length = 198
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 126/214 (58%), Positives = 149/214 (69%), Gaps = 19/214 (8%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS Y FKYIIIGD GVGKSCLLLQFTD RFQ HD TIGVEFG R + I+ P+KLQIW
Sbjct: 1 MSRSYAFKYIIIGDIGVGKSCLLLQFTDNRFQRFHDTTIGVEFGIRTININNNPVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE F SIT+SYYR AA ALLVYDITRRETF+H+++WLEDARQHA+ + IML+GNK
Sbjct: 61 DTAGQERFSSITKSYYRKAADALLVYDITRRETFDHMATWLEDARQHASSDTIIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLA R VS EEGE+F KENGL+F+E SA++ +N+EE + D ++
Sbjct: 121 SDLACNRVVSTEEGEKFTKENGLMFMEVSAKSRENIEEVRVS--------------DLLD 166
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRG---GCCS 211
+ IKVGY G P+ RD S CCS
Sbjct: 167 ETHEIKVGY--GGLPAEGRDNRESSYDLGRRCCS 198
>gi|308488029|ref|XP_003106209.1| CRE-RAB-14 protein [Caenorhabditis remanei]
gi|308254199|gb|EFO98151.1| CRE-RAB-14 protein [Caenorhabditis remanei]
gi|341884677|gb|EGT40612.1| CBN-RAB-14 protein [Caenorhabditis brenneri]
Length = 210
Score = 249 bits (635), Expect = 7e-64, Method: Compositional matrix adjust.
Identities = 120/201 (59%), Positives = 150/201 (74%), Gaps = 2/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYD+TRR T+NHLSSWL DA+ NPN +I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDMTRRSTYNHLSSWLADAKSLTNPNTAIFLIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FA+ENGL FLE SA+T NVE+AF++TA +I QNIQ+G+LD
Sbjct: 127 DLEDQRDVPYEEAKAFAEENGLTFLECSAKTGSNVEDAFLETAKQIYQNIQDGSLDLNAA 186
Query: 182 QSGI--KVGYGRGQGPSGARD 200
+G+ K R +G +D
Sbjct: 187 DTGVQPKQNLPRAAENNGKKD 207
>gi|323454484|gb|EGB10354.1| hypothetical protein AURANDRAFT_58844 [Aureococcus anophagefferens]
Length = 210
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 118/189 (62%), Positives = 149/189 (78%), Gaps = 2/189 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGR-PIKLQI 59
MSY L KYI++GDTGVGKSCLLLQFTD+RF+ H+LTIGVEFGARM+ ++ R P+KLQI
Sbjct: 1 MSYYALLKYIVVGDTGVGKSCLLLQFTDRRFKEAHELTIGVEFGARMIYVEPRVPLKLQI 60
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAGQESF SITRSYYRGAA ALLVYD+TRRETF ++ WL + R+++N ++L+ N
Sbjct: 61 WDTAGQESFHSITRSYYRGAAVALLVYDVTRRETFENVRRWLAETRKNSNDQCLVVLIAN 120
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
KCDL H+RAVS+ EG FA ENGL+FLEASA+T NV+EAF+ A K+ I+ G ++
Sbjct: 121 KCDLVHQRAVSEAEGAAFALENGLIFLEASAKTRTNVDEAFVAPARKVYGMIKAGEIEC- 179
Query: 180 NDQSGIKVG 188
N+ G+K G
Sbjct: 180 NNTEGVKRG 188
>gi|158296675|ref|XP_555021.3| AGAP008419-PA [Anopheles gambiae str. PEST]
gi|157014825|gb|EAL39571.3| AGAP008419-PA [Anopheles gambiae str. PEST]
Length = 215
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 117/185 (63%), Positives = 144/185 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE + FA E+GLLF EASA T QNVEEAF++TA KI Q+I++G LD +
Sbjct: 127 DLESTREVTYEEAKNFADEHGLLFAEASAMTGQNVEEAFLETARKIYQSIKDGRLDLNSS 186
Query: 182 QSGIK 186
++G++
Sbjct: 187 ETGVQ 191
>gi|290977760|ref|XP_002671605.1| rab family small GTPase [Naegleria gruberi]
gi|284085175|gb|EFC38861.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 151/185 (81%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
S++Y+FKYIIIGD GVGKSCLL QFT+++FQ TIGVEFG R++ ++G+ IKLQIWD
Sbjct: 3 SHEYIFKYIIIGDMGVGKSCLLHQFTEQKFQSDCPHTIGVEFGTRVIEVEGKSIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR TF+HL+SWL DAR NP+ I+L+GNK
Sbjct: 63 TAGQERFRAVTRSYYRGAAGALMVYDITRRNTFHHLASWLTDARNLTNPHTIIVLIGNKS 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R VS EE +FAKENGL+++E SA+T +NV +AF++TA++I +NI +G LD +
Sbjct: 123 DLEDQRQVSFEEASRFAKENGLVYVETSAKTGENVTKAFMETASRIYKNIVDGVLDPNSV 182
Query: 182 QSGIK 186
+SGI+
Sbjct: 183 ESGIQ 187
>gi|307949529|gb|ADN96600.1| Rab GTPase 2d [Euplotes octocarinatus]
Length = 217
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 119/214 (55%), Positives = 155/214 (72%), Gaps = 6/214 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY Y+FKYII+GD+ VGKSCLLLQFTDKRF+ HDLTIGVEFG+R V I+ + IKLQIWD
Sbjct: 5 SYSYVFKYIIVGDSAVGKSCLLLQFTDKRFKSTHDLTIGVEFGSRTVQINDKAIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYRG+ GALLVYD+T+R++F +L WLE+ +++A M+ +L+GNK
Sbjct: 65 TAGQESFRSITRSYYRGSIGALLVYDVTKRQSFENLQKWLEEMKENAYSKMTTILIGNKI 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL + R VS EEG+ FAK++ L+F E SA++A NVE+AF+ KI N++ G + +
Sbjct: 125 DLENERQVSYEEGQAFAKKHDLVFFETSAKSAHNVEKAFLAITQKIYTNLENGEYNIHKE 184
Query: 182 QSGIKVG-----YGRGQGPSGARDGTVSQRGGCC 210
GIK G Y +G G + G + GCC
Sbjct: 185 SIGIKPGNTLPTYIQG-GLKDPKRGDPKKSEGCC 217
>gi|145484322|ref|XP_001428171.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834551|emb|CAI44580.1| rab_A05 [Paramecium tetraurelia]
gi|124395255|emb|CAK60773.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 247 bits (630), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 111/211 (52%), Positives = 156/211 (73%), Gaps = 1/211 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYD+LFKYIIIGD+GVGKSCLLLQ DKRF+ H++TIGVEFGA+ + +D +KLQ+W
Sbjct: 1 MSYDFLFKYIIIGDSGVGKSCLLLQLLDKRFRQKHEVTIGVEFGAKPIEVDDLNVKLQVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+F+SITR+YYR AAGAL+VYD+T+RE+FN + +W+E+ARQ+ N MS++LVGNK
Sbjct: 61 DTAGQEAFKSITRTYYRSAAGALIVYDVTKRESFNSVQTWIEEARQNGNQTMSMILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R V+ EEG+Q AK+ +LF+E SA+T ++++AF+ +A +I+Q ++ +D +
Sbjct: 121 TDLESMREVTTEEGKQLAKQQNILFIETSAKTGDHIDDAFVISAKEIIQKLKSKQIDLRD 180
Query: 181 DQSGIKVG-YGRGQGPSGARDGTVSQRGGCC 210
+ GIK G + + D Q CC
Sbjct: 181 ENCGIKKGANAQNKNTLQNSDDDKKQLNSCC 211
>gi|378792667|pdb|4DRZ|A Chain A, Crystal Structure Of Human Rab14
Length = 196
Score = 247 bits (630), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 116/171 (67%), Positives = 139/171 (81%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 26 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 85
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQ FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 86 TAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 145
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 172
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ
Sbjct: 146 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQ 196
>gi|73535767|pdb|1Z0F|A Chain A, Gdp-Bound Rab14 Gtpase
Length = 179
Score = 246 bits (628), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 115/169 (68%), Positives = 138/169 (81%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 11 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 70
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 71 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 130
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 170
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QN
Sbjct: 131 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQN 179
>gi|289740227|gb|ADD18861.1| Rab protein 14 [Glossina morsitans morsitans]
Length = 215
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/185 (67%), Positives = 147/185 (79%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+Y+FKYIIIGD GVGKSC+L QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYNYIFKYIIIGDMGVGKSCILHQFTEKKFMANCPHTIGVEFGTRIIEVDDKKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NPN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ EE E+FAKENGL+FLEASA T QNVEEAF++TA KI QNIQEG LD
Sbjct: 127 DLESTREVTFEEAEEFAKENGLMFLEASAMTGQNVEEAFLETARKIYQNIQEGRLDLNAS 186
Query: 182 QSGIK 186
+SG++
Sbjct: 187 ESGVQ 191
>gi|308161368|gb|EFO63819.1| Rab2a [Giardia lamblia P15]
Length = 214
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 145/208 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFKYI++GDT VGKSCLLLQFT++RFQ HD+T+GVE+G R + + G+ IK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
T GQESFRSITRSYYRG+ ALLVYDITRR +F H+++WLE+ R + +I+LVGNK
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITRRASFEHVANWLEECRTYGGDKTTILLVGNKT 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V+ +EGE+FAKEN L F+E SA+T NVEEAF+ A +L + G +D ++
Sbjct: 125 DRESSRMVTYDEGEKFAKENNLFFIETSAKTNSNVEEAFMIIAKAVLDKVNSGEIDITDE 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
G+K + + + GGC
Sbjct: 185 SCGVKAASTSKNTVNMKTETPTKESGGC 212
>gi|159114144|ref|XP_001707297.1| Rab2a [Giardia lamblia ATCC 50803]
gi|10047433|gb|AAG12240.1|AF183937_1 guanine nucleotide-binding protein Rab2 [Giardia intestinalis]
gi|157435401|gb|EDO79623.1| Rab2a [Giardia lamblia ATCC 50803]
Length = 214
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 145/208 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFKYI++GDT VGKSCLLLQFT++RFQ HD+T+GVE+G R + + G+ IK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
T GQESFRSITRSYYRG+ ALLVYDITRR +F H+++WLE+ R + +I+LVGNK
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITRRASFEHVANWLEECRTYGGDKTTILLVGNKT 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V+ +EGE+FAKEN L F+E SA+T NVEEAF+ A +L + G +D ++
Sbjct: 125 DRESSRMVTYDEGEKFAKENNLFFIETSAKTNSNVEEAFMIIAKAVLDKVNSGEIDITDE 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
G+K + + + GGC
Sbjct: 185 SCGVKAASTSKNTVNMKTEAPSKESGGC 212
>gi|253743849|gb|EET00140.1| Rab2a [Giardia intestinalis ATCC 50581]
Length = 214
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 145/208 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFKYI++GDT VGKSCLLLQFT++RFQ HD+T+GVE+G R + + G+ IK QIWD
Sbjct: 5 SYNYLFKYIVVGDTAVGKSCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
T GQESFRSITRSYYRG+ ALLVYDITRR +F H+++WLE+ R + +I+LVGNK
Sbjct: 65 TCGQESFRSITRSYYRGSCCALLVYDITRRASFEHVANWLEECRTYGGDKTTILLVGNKT 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V+ +EGE+FAKEN L F+E SA+T NVEEAF+ A +L + G +D ++
Sbjct: 125 DRESSRMVTYDEGEKFAKENNLFFIETSAKTNSNVEEAFMIIARAVLDKVNSGEIDITDE 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
G+K + + + GGC
Sbjct: 185 SCGVKAASTSKNTVNMKTEAPSKESGGC 212
>gi|357460037|ref|XP_003600300.1| Ras-related protein Rab-2-A [Medicago truncatula]
gi|355489348|gb|AES70551.1| Ras-related protein Rab-2-A [Medicago truncatula]
Length = 198
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/214 (57%), Positives = 150/214 (70%), Gaps = 19/214 (8%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y FKYIIIGDTGVGKSCL+LQF D RFQ H+ TIGV FG + + I+ P+KLQIW
Sbjct: 1 MSHSYAFKYIIIGDTGVGKSCLVLQFMDNRFQRFHNATIGVGFGFKTININNNPVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSIT+SYYR AA ALLVYDITRRETF+HL++WLEDARQHA+ + IML+GNK
Sbjct: 61 DTAGQERFRSITKSYYRKAACALLVYDITRRETFDHLATWLEDARQHASSDTIIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLA R VS EEGE+F KENGL+F+E SA++ +N+EE + D ++
Sbjct: 121 SDLACNRVVSTEEGEKFTKENGLMFMEVSAKSRENIEEVRVS--------------DLLD 166
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRG---GCCS 211
+ IKVGY G P+ RD S CCS
Sbjct: 167 ETHEIKVGY--GGLPAEGRDNRESSYDLGRRCCS 198
>gi|313216504|emb|CBY37802.1| unnamed protein product [Oikopleura dioica]
gi|313232450|emb|CBY24118.1| unnamed protein product [Oikopleura dioica]
Length = 216
Score = 244 bits (623), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 151/208 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDY+ KYIIIGD GVGKSCLL QFT+K+F TIGVE+G R++ + G+ IKLQIWD
Sbjct: 7 NYDYILKYIIIGDQGVGKSCLLHQFTEKKFMADCPHTIGVEYGTRIIEVAGQRIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRG++GA++VYDITRR+TFNHL +WL DA HA+PN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGSSGAIMVYDITRRQTFNHLEAWLTDATNHASPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE +FA+E+GL F EASA+T +NVE+AF++TA +I Q IQEG+L+
Sbjct: 127 DLEDQRDVPTEEAREFAREHGLHFCEASAKTGENVEDAFLETAKQIYQKIQEGSLELNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
SG++ R + + + Q C
Sbjct: 187 DSGVQTRSQRSNQINSSDEPQTPQDKNC 214
>gi|339238789|ref|XP_003380949.1| GTP-binding protein yptV4 [Trichinella spiralis]
gi|316976091|gb|EFV59434.1| GTP-binding protein yptV4 [Trichinella spiralis]
Length = 180
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 115/173 (66%), Positives = 137/173 (79%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y ++FKYIIIGD GVGKSCLL QFT+K+F P TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSFIFKYIIIGDMGVGKSCLLHQFTEKKFMPDCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR +PN I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTHPNTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG 174
DL R V+ EE +QFA ENGLLF+E SA+T +VE+ FI TA KI QNIQ+G
Sbjct: 127 DLDGDRDVTYEEAKQFADENGLLFMECSAKTGDHVEDVFIDTARKIYQNIQDG 179
>gi|440804147|gb|ELR25025.1| Ras-related protein Rab-2-B [Acanthamoeba castellanii str. Neff]
Length = 220
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/216 (56%), Positives = 154/216 (71%), Gaps = 10/216 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+ FKYI++G +GVGKS LLLQFTDKRF+P HD+TIGVEFGAR V ++G+ IK+QIWDT
Sbjct: 8 YDHRFKYIVVGPSGVGKSSLLLQFTDKRFEPSHDMTIGVEFGARTVKLNGQTIKIQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYY GA GALLVYDIT R++F +L WLED Q+A + IMLVGNK D
Sbjct: 68 AGQESFKSITRSYYHGAFGALLVYDITCRDSFKYLRGWLEDIHQNAGAELVIMLVGNKAD 127
Query: 123 LAHRRAVSKEEGEQFAKENGL-LFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
+ RR +S EEGEQFA++NG+ F E SA+T + V+ F+KTA IL I++G + +
Sbjct: 128 MEDRREISWEEGEQFARDNGIDCFSEVSAKTGEKVDAVFLKTAEVILDKIEQGVIASEKP 187
Query: 182 QSGIKVGY------GRGQGPSGARDGTVSQRGGCCS 211
+ I+ G GQ P+GA GGCCS
Sbjct: 188 EGTIRAHQAAPGRAGPGQKPAGAEK---PANGGCCS 220
>gi|312085696|ref|XP_003144782.1| RAB14 protein [Loa loa]
gi|307760054|gb|EFO19288.1| Ras-like protein Rab-14 [Loa loa]
Length = 213
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 143/185 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR +PN I ++GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTHPNTVIFMIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE + FA E+GL FLE SA+T NVE+AF+ TA KI QNI++G+LD
Sbjct: 128 DLDGQRDVTFEEAKAFADEHGLTFLECSAKTGDNVEDAFLDTARKIYQNIKDGSLDLNQA 187
Query: 182 QSGIK 186
+G++
Sbjct: 188 DTGVQ 192
>gi|170581209|ref|XP_001895584.1| Ras-related protein Rab-14 [Brugia malayi]
gi|158597400|gb|EDP35557.1| Ras-related protein Rab-14, putative [Brugia malayi]
Length = 213
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 115/185 (62%), Positives = 143/185 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR +PN I ++GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADARNLTHPNTVIFMIGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE + FA E+GL FLE SA+T NVE+AF+ TA KI QNI++G+LD
Sbjct: 128 DLDGQRDVTFEEAKAFADEHGLTFLECSAKTGDNVEDAFLDTARKIYQNIKDGSLDLNQA 187
Query: 182 QSGIK 186
+G++
Sbjct: 188 DTGVQ 192
>gi|442758569|gb|JAA71443.1| Putative gtpase rab14 small g protein superfamily [Ixodes ricinus]
Length = 307
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 115/174 (66%), Positives = 140/174 (80%)
Query: 13 GDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSIT 72
GD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWDTAGQE FR++T
Sbjct: 18 GDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVCGQKIKLQIWDTAGQERFRAVT 77
Query: 73 RSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKE 132
RSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I L+GNKCDL +R V+ E
Sbjct: 78 RSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTGIFLIGNKCDLEAQRDVTYE 137
Query: 133 EGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIK 186
E +QFA ENGL+F+EASA+T Q+VEEAF++TA KI QNIQ+G+LD +SG++
Sbjct: 138 EAKQFADENGLMFVEASAKTGQHVEEAFLETAKKIYQNIQDGSLDLNAAESGVQ 191
>gi|432951355|ref|XP_004084790.1| PREDICTED: ras-related protein Rab-14-like, partial [Oryzias
latipes]
Length = 200
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 118/195 (60%), Positives = 147/195 (75%), Gaps = 3/195 (1%)
Query: 11 IIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRS 70
+ GD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ +KLQIWDTAGQE FR+
Sbjct: 1 LAGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIMEVHGQKVKLQIWDTAGQERFRA 60
Query: 71 ITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVS 130
+TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK DL +R V+
Sbjct: 61 VTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKADLEAQRDVT 120
Query: 131 KEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYG 190
EE +QFA ENGLLFLEASA+T +NVEEAF++ A +I QNIQ+G+LD +SG++
Sbjct: 121 YEEAKQFADENGLLFLEASAKTGENVEEAFLEAAKRIYQNIQDGSLDLNAAESGVQ---H 177
Query: 191 RGQGPSGARDGTVSQ 205
+ P G R + SQ
Sbjct: 178 KPSAPQGGRLNSDSQ 192
>gi|241896951|ref|NP_001155935.1| Rab-protein 14 isoform b [Acyrthosiphon pisum]
gi|239793451|dbj|BAH72840.1| ACYPI000787 [Acyrthosiphon pisum]
Length = 233
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 140/184 (76%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKYII+GD GVGKSCLL QFT+++F TIGVEFG R++ + G+ IKLQIWDT
Sbjct: 29 YSYIFKYIIVGDMGVGKSCLLHQFTEQKFTADCPHTIGVEFGTRIIEVSGKKIKLQIWDT 88
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR++TRSYYRGAAGAL+VYDITRR ++NHLSSWL D R NP I L+GNK D
Sbjct: 89 AGQERFRAVTRSYYRGAAGALMVYDITRRSSYNHLSSWLSDTRNLTNPGTVIYLIGNKLD 148
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ R VS EE +QFA ENGL+FLEASA+T + VE+AF+KTA I + IQ+G LD
Sbjct: 149 MESNRDVSYEEAKQFADENGLMFLEASAKTGEYVEDAFLKTAQIIYECIQDGRLDLNAAD 208
Query: 183 SGIK 186
SG++
Sbjct: 209 SGVQ 212
>gi|397475361|ref|XP_003809108.1| PREDICTED: ras-related protein Rab-2A [Pan paniscus]
Length = 176
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 112/152 (73%), Positives = 130/152 (85%)
Query: 37 LTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNH 96
+ GVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNH
Sbjct: 1 MVTGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNH 60
Query: 97 LSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNV 156
L++WLEDARQH+N NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NV
Sbjct: 61 LTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNV 120
Query: 157 EEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
EEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 121 EEAFINTAKEIYEKIQEGVFDINNEANGIKIG 152
>gi|241896945|ref|NP_001155932.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
gi|241896947|ref|NP_001155933.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
gi|241896949|ref|NP_001155934.1| Rab-protein 14 isoform a [Acyrthosiphon pisum]
Length = 210
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 114/184 (61%), Positives = 140/184 (76%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y Y+FKYII+GD GVGKSCLL QFT+++F TIGVEFG R++ + G+ IKLQIWDT
Sbjct: 6 YSYIFKYIIVGDMGVGKSCLLHQFTEQKFTADCPHTIGVEFGTRIIEVSGKKIKLQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR++TRSYYRGAAGAL+VYDITRR ++NHLSSWL D R NP I L+GNK D
Sbjct: 66 AGQERFRAVTRSYYRGAAGALMVYDITRRSSYNHLSSWLSDTRNLTNPGTVIYLIGNKLD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ R VS EE +QFA ENGL+FLEASA+T + VE+AF+KTA I + IQ+G LD
Sbjct: 126 MESNRDVSYEEAKQFADENGLMFLEASAKTGEYVEDAFLKTAQIIYECIQDGRLDLNAAD 185
Query: 183 SGIK 186
SG++
Sbjct: 186 SGVQ 189
>gi|307777764|dbj|BAJ21278.1| Rab-family small GTPase Rab2B [Tetrahymena thermophila]
Length = 218
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 109/189 (57%), Positives = 145/189 (76%), Gaps = 1/189 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YL KYI+IGDTGVGKS L++QFT + F+ HD+T+GVEFGA+++ I+G+ +KLQIW
Sbjct: 1 MSYAYLLKYIVIGDTGVGKSSLIMQFTQEVFRDKHDITVGVEFGAKVIKINGQSVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSI RSYYR AGAL+VYDITRR+TF H++ W+E+A + N ++ ML+GNK
Sbjct: 61 DTAGQEDFRSIVRSYYRSTAGALVVYDITRRDTFKHITRWVEEATNNGNSTLTFMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV- 179
DL +R VS EEG Q AKE+ +LF+E SA+T NVE+ F +TA IL ++ G ++A
Sbjct: 121 SDLESQREVSYEEGLQLAKEHNMLFIETSAKTKHNVEQTFCQTAVTILDKVKNGEIEATA 180
Query: 180 NDQSGIKVG 188
N SG+K+G
Sbjct: 181 NGSSGVKLG 189
>gi|380017538|ref|XP_003692710.1| PREDICTED: ras-related protein Rab-2-like isoform 2 [Apis florea]
Length = 190
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 128/198 (64%), Positives = 147/198 (74%), Gaps = 25/198 (12%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGV EFGARM+TIDG+PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGV------------------------EFGARMITIDGKPIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 37 DTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQHSNSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +RR V +EEGE FA+E+GL+F+E SA+TA NVE+AFI TA I + IQEG D N
Sbjct: 97 SDLDNRREVRREEGEAFAREHGLVFMETSAKTAINVEDAFINTAKVIYEKIQEGVFDINN 156
Query: 181 DQSGIKVGYGRG-QGPSG 197
+ +GIK+G PSG
Sbjct: 157 EANGIKIGPQHSPTSPSG 174
>gi|340381312|ref|XP_003389165.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Amphimedon
queenslandica]
Length = 193
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 126/221 (57%), Positives = 148/221 (66%), Gaps = 39/221 (17%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGV EFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYSYLFKYIIIGDTGV------------------------EFGARMINIDGKQIKLQIW 36
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETF HL+SWL+DARQH++ NM IML+GNK
Sbjct: 37 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLTSWLDDARQHSSSNMVIMLIGNK 96
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V EEG FA+E+GL+F+E SA+TA NVEEAFI TA ++ + IQ+G D N
Sbjct: 97 SDLDAKRDVKFEEGLAFAQEHGLVFMETSAKTAANVEEAFINTAKEVYKKIQDGVFDITN 156
Query: 181 DQSGIKVGY-----------GRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G P+ A+ G GGCC
Sbjct: 157 EANGIKLGPQHQGGGGGGQRAASADPNKAQGGG----GGCC 193
>gi|348557305|ref|XP_003464460.1| PREDICTED: ras-related protein Rab-2A-like [Cavia porcellus]
Length = 216
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/150 (74%), Positives = 129/150 (86%)
Query: 39 IGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLS 98
+ VEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+
Sbjct: 43 VRVEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT 102
Query: 99 SWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEE 158
+WLEDARQH+N NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEE
Sbjct: 103 TWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEE 162
Query: 159 AFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
AFI TA +I + IQEG D N+ +GIK+G
Sbjct: 163 AFINTAKEIYEKIQEGVFDINNEANGIKIG 192
>gi|170592655|ref|XP_001901080.1| Ras-related protein Rab-2 [Brugia malayi]
gi|158591147|gb|EDP29760.1| Ras-related protein Rab-2, putative [Brugia malayi]
Length = 181
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/149 (75%), Positives = 128/149 (85%)
Query: 40 GVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSS 99
GVEFGARM+TID + IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL+S
Sbjct: 9 GVEFGARMITIDSKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS 68
Query: 100 WLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEA 159
WLEDARQH+N NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEA
Sbjct: 69 WLEDARQHSNSNMVIMLIGNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEA 128
Query: 160 FIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FI TA +I + IQEG D N+ +GIK+G
Sbjct: 129 FIDTAKEIYRKIQEGVFDINNEANGIKLG 157
>gi|395824398|ref|XP_003785452.1| PREDICTED: ras-related protein Rab-14 [Otolemur garnettii]
Length = 206
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/210 (57%), Positives = 148/210 (70%), Gaps = 14/210 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENG +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENG---------GGENVEDAFLEAAKKIYQNIQDGSLDLNAA 177
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 178 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 204
>gi|291233668|ref|XP_002736774.1| PREDICTED: predicted protein-like, partial [Saccoglossus
kowalevskii]
Length = 172
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/148 (75%), Positives = 128/148 (86%)
Query: 41 VEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSW 100
VEFGARM+TIDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++W
Sbjct: 1 VEFGARMITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTW 60
Query: 101 LEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 160
LEDARQH+N NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAF
Sbjct: 61 LEDARQHSNSNMVIMLIGNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAF 120
Query: 161 IKTAAKILQNIQEGALDAVNDQSGIKVG 188
I TA +I + IQEG D N+ +GIK+G
Sbjct: 121 INTAKEIYEKIQEGVFDINNEANGIKLG 148
>gi|346470403|gb|AEO35046.1| hypothetical protein [Amblyomma maculatum]
Length = 212
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 141/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK+++IG G GKSCLL QF + +F+ + TIGVEFG+++V + GR +KLQIWD
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLEDDREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAKTILAKIESGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|427787247|gb|JAA59075.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 212
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 114/187 (60%), Positives = 141/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK+++IG G GKSCLL QF + +F+ + TIGVEFG+++V + GR +KLQIWD
Sbjct: 4 SYDYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLEDDREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAKTILAKIESGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|449019525|dbj|BAM82927.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 222
Score = 235 bits (600), Expect = 8e-60, Method: Compositional matrix adjust.
Identities = 117/192 (60%), Positives = 146/192 (76%), Gaps = 1/192 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGRPIKLQIW 60
+Y YLFK+IIIG + GKSCLLL+FTD RFQ HDLTIGVEFG R +T +G+ +KLQIW
Sbjct: 4 AYAYLFKFIIIGSSATGKSCLLLRFTDDRFQVTHDLTIGVEFGTRTLTARNGQRVKLQIW 63
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRG+A ALLVYDITRRETF ++SWL D R +A N +++LVGNK
Sbjct: 64 DTAGQESFRSITRSYYRGSAAALLVYDITRRETFLDVTSWLNDVRAYATRNTTVVLVGNK 123
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V++EEGE FA+ +GLLF+E SA+T NV EAF A +L+ I G L+
Sbjct: 124 SDLEDQRQVAREEGEAFARNHGLLFIETSAKTGSNVAEAFAIAADAVLERIVRGELEGNM 183
Query: 181 DQSGIKVGYGRG 192
+Q G+++G G G
Sbjct: 184 EQYGVRIGTGAG 195
>gi|256071246|ref|XP_002571952.1| rab-2414 [Schistosoma mansoni]
gi|238657101|emb|CAZ28182.1| rab-2,4,14, putative [Schistosoma mansoni]
Length = 225
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 114/218 (52%), Positives = 153/218 (70%), Gaps = 9/218 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYII+GD GVGKSCL+ QFT+K+F P TIGVEF +++ ++ + +K+QIWD
Sbjct: 8 NYSYIFKYIIVGDMGVGKSCLMHQFTEKKFIPDCPHTIGVEFSTKIIEVNDQKVKIQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGA+GALLVYDITR+ TFN + +WL DAR+ +PN I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGASGALLVYDITRKPTFNRIQTWLTDARRLTSPNTVIFLIGNKA 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGA--LDAV 179
DL +R V+ EE +Q A ENGLLFLE SA++ NVE F +TA KI QN+Q+G+ L++V
Sbjct: 128 DLEEQRDVTYEEAKQLADENGLLFLECSAKSGANVENVFTETARKIFQNVQDGSVYLNSV 187
Query: 180 N----DQSGIKVGYGRGQ---GPSGARDGTVSQRGGCC 210
+ + + G GR G S + +G Q G C
Sbjct: 188 DGGVLSKGSLTPGTGRNSVELGNSASTNGGTRQSGCAC 225
>gi|340504917|gb|EGR31311.1| rab2 gtpase, putative [Ichthyophthirius multifiliis]
Length = 200
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 136/172 (79%)
Query: 17 VGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYY 76
VGKSC+L QF DK+F+ HD+TIGVEFGARM+ + + IK+QIWDTAGQE FRSITRSYY
Sbjct: 1 VGKSCVLSQFIDKKFKEKHDVTIGVEFGARMINVQNKNIKIQIWDTAGQECFRSITRSYY 60
Query: 77 RGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQ 136
R AAGALLV+DITR+++F ++ WLE+A+Q+ NP++S +L+GNKCDL +R VS EE +
Sbjct: 61 RSAAGALLVFDITRKDSFQNIGRWLEEAKQNGNPHLSFVLIGNKCDLEDQRQVSVEEAQN 120
Query: 137 FAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
FAKEN LLFLEASA+T+QN+EEAF + A I I G ++ + +GIKVG
Sbjct: 121 FAKENNLLFLEASAKTSQNIEEAFHQNAKMIFDKINTGVINPNQESNGIKVG 172
>gi|384487278|gb|EIE79458.1| hypothetical protein RO3G_04163 [Rhizopus delemar RA 99-880]
Length = 178
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 113/178 (63%), Positives = 135/178 (75%), Gaps = 1/178 (0%)
Query: 33 PVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 92
P HDLTIGV FG R VT++ + KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE
Sbjct: 2 PAHDLTIGVGFGTRFVTVNDQQTKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRE 61
Query: 93 TFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASART 152
TF +LS WLEDARQHANPN IML+GNK DL +R VS+EE E+FA+E+ L FLE SA+
Sbjct: 62 TFENLSVWLEDARQHANPNTVIMLIGNKSDLEGQRQVSREEAERFAQEHDLFFLETSAKL 121
Query: 153 AQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
A N+EEAF+KTA +I + I G +D ++ +G+K+ +G G S T S GGCC
Sbjct: 122 ADNIEEAFVKTAEEIQKKIASGTIDLNSESNGVKLAPSQG-GTSLPSANTSSNTGGCC 178
>gi|118381174|ref|XP_001023748.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila]
gi|5738170|gb|AAD50282.1|AF169952_1 putative intermediate compartment protein [Tetrahymena thermophila]
gi|89305515|gb|EAS03503.1| small GTP-binding protein domain containing protein [Tetrahymena
thermophila SB210]
gi|307777888|dbj|BAJ21340.1| Rab-family small GTPase Rab2G [Tetrahymena thermophila]
Length = 207
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 105/210 (50%), Positives = 149/210 (70%), Gaps = 3/210 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGD+ VGKS +LLQF + +F+ HD TIGVEFG++++ + G+ +KLQ+W
Sbjct: 1 MSYSYLFKYIIIGDSSVGKSAILLQFMEGKFKAEHDTTIGVEFGSKIIQVKGKNVKLQVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESF+SITRSYYRG+ A LVYD+T RE+F ++ WLE+ + +AN ++++LVGNK
Sbjct: 61 DTAGQESFKSITRSYYRGSICAFLVYDVTNRESFTNIQKWLEETQNYANDKITLVLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLA++R VS +EG +FA++ + F+E SA+ QN+++ F K+ ILQ I+ +DA N
Sbjct: 121 IDLANKRQVSYDEGHEFAQKQEIQFVETSAKMGQNIDQVFRKSTEDILQKIENRQVDATN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIK+G Q T + CC
Sbjct: 181 ESLGIKIG---PQLTEKMVSDTKKTKKECC 207
>gi|241643394|ref|XP_002411061.1| RAS-related protein, putative [Ixodes scapularis]
gi|215503692|gb|EEC13186.1| RAS-related protein, putative [Ixodes scapularis]
Length = 217
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 112/185 (60%), Positives = 139/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK+++IG G GKSCLL QF + +F+ + TIGVEFG+++V + GR +KLQIWDTA
Sbjct: 11 DYLFKFLVIGSAGTGKSCLLHQFIENKFKAESNHTIGVEFGSKVVNVGGRSVKLQIWDTA 70
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+LVGNK DL
Sbjct: 71 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVILLVGNKKDL 130
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD S
Sbjct: 131 EDDREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCAKTILAKIESGELDPERIGS 190
Query: 184 GIKVG 188
GI+ G
Sbjct: 191 GIQYG 195
>gi|449665721|ref|XP_002158483.2| PREDICTED: ras-related protein Rab-4B-like [Hydra magnipapillata]
Length = 209
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/197 (58%), Positives = 143/197 (72%), Gaps = 2/197 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFKY+IIG GVGKSC+L QF + +F+ TIGVEFG+++V I G+ +KLQIWD
Sbjct: 4 TYDYLFKYLIIGSAGVGKSCILHQFMENKFKQDAHHTIGVEFGSKIVNIGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L+GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNTLTTWLTDARTLASPNIVIILLGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K + IL I G LD
Sbjct: 124 DLEADREVTFLEASRFAQENELMFLETSAATGENVEEAFLKCSRSILTKIDAGDLDPERM 183
Query: 182 QSGIKVGYG--RGQGPS 196
SGI+ G R PS
Sbjct: 184 GSGIQYGNATLRKHQPS 200
>gi|145539502|ref|XP_001455441.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833837|emb|CAI39373.1| rab_A09 [Paramecium tetraurelia]
gi|124423249|emb|CAK88044.1| unnamed protein product [Paramecium tetraurelia]
Length = 252
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 140/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
S+ YLFKYIIIGD VGKSCLL+QF DKRF+ HD+TIGVEFGAR++ I +KL IWD
Sbjct: 14 SFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARIIRIQNVALKLSIWD 73
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYR +A A++VYDIT+R +F ++ WL+DAR++ N ++ +LVGNK
Sbjct: 74 TAGQESFRSITRSYYRSSAAAIIVYDITKRNSFENVVKWLDDARENGNKQITFLLVGNKN 133
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V EE +QFA++N + F+E SA+T NV++ F K A IL IQ+G +D N+
Sbjct: 134 DLEQERQVPFEEAKQFAQDNEIGFMETSAKTNYNVDQMFTKLAEIILFKIQKGIIDPKNE 193
Query: 182 QSGIKVG 188
G++VG
Sbjct: 194 SFGVRVG 200
>gi|308160328|gb|EFO62821.1| Rab2b [Giardia lamblia P15]
Length = 227
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 152/220 (69%), Gaps = 13/220 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI---DG--RPIKL 57
+ Y+FKYII+GD+ VGKSCLLL+F +++F P+HD+T+GVEF + + + DG + +K+
Sbjct: 6 HHYIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTVKV 65
Query: 58 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED----ARQHANPN-- 111
QIWDTAGQE FRSITRSYYRGAAGALLVYD+T R +F L WL+D A+PN
Sbjct: 66 QIWDTAGQEQFRSITRSYYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGV 125
Query: 112 --MSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
M IMLVGNK DL H+R VSKEEGEQFA+++GLLF+E SA+ NV E+F +TA IL+
Sbjct: 126 SGMVIMLVGNKTDLEHKRKVSKEEGEQFARDHGLLFIETSAKDDLNVSESFNETARAILE 185
Query: 170 NIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGC 209
++ G +D V+ SG+K G + T S G C
Sbjct: 186 KVETGEIDCVSKDSGVKAGALNMSAAATNASSTDSTFGNC 225
>gi|145479417|ref|XP_001425731.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833719|emb|CAI39333.1| rab_B47 [Paramecium tetraurelia]
gi|124392803|emb|CAK58333.1| unnamed protein product [Paramecium tetraurelia]
Length = 250
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 140/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
S+ YLFKYIIIGD VGKSCLL+QF DKRF+ HD+TIGVEFGAR++ I +KL IWD
Sbjct: 14 SFVYLFKYIIIGDMAVGKSCLLMQFIDKRFRSKHDVTIGVEFGARIIRIQNVALKLSIWD 73
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITRSYYR +A A++VYDIT+R +F ++ WL+DAR++ N ++ +LVGNK
Sbjct: 74 TAGQESFRSITRSYYRSSAAAIIVYDITKRNSFENVVKWLDDARENGNKQITFLLVGNKN 133
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V EE +QFA++N + F+E SA+T NV++ F K A IL IQ+G +D N+
Sbjct: 134 DLEQERQVPFEEAKQFAQDNEIGFMETSAKTNYNVDQMFTKLAEIILFKIQKGIIDPKNE 193
Query: 182 QSGIKVG 188
G++VG
Sbjct: 194 SFGVRVG 200
>gi|253743957|gb|EET00230.1| Rab2b [Giardia intestinalis ATCC 50581]
Length = 227
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 116/220 (52%), Positives = 152/220 (69%), Gaps = 13/220 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI---DG--RPIKL 57
+ Y+FKYII+GD+ VGKSCLLL+F +++F P+HD+T+GVEF + + + DG + IK+
Sbjct: 6 HHYIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTIKV 65
Query: 58 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED----ARQHANPN-- 111
QIWDTAGQE FRSITRSYYRGAAGALLVYD+T R +F L WL+D A+PN
Sbjct: 66 QIWDTAGQEQFRSITRSYYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGV 125
Query: 112 --MSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
M IMLVGNK DL H+R VS+EEGEQFA+++GLLF+E SA+ NV E+F +TA IL+
Sbjct: 126 SGMVIMLVGNKTDLEHKRKVSREEGEQFARDHGLLFIETSAKDNLNVSESFNETARAILE 185
Query: 170 NIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGC 209
++ G +D V+ SG+K G + T S G C
Sbjct: 186 KVETGEIDCVSKDSGVKAGALNMSAAATTTPSTDSTFGNC 225
>gi|340507940|gb|EGR33774.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 234
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 113/215 (52%), Positives = 148/215 (68%), Gaps = 15/215 (6%)
Query: 1 MSYDYLFKYIIIGDT--------------GVGKSCLLLQFTDKRFQPVHDLTIGVEFGAR 46
MSY YLFKYIIIGDT GVGKS LLL+F +F+ H++T+GVEFG++
Sbjct: 1 MSYQYLFKYIIIGDTVKLYIKNKIKLKFQGVGKSSLLLKFIKDQFKDQHEITVGVEFGSK 60
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
+ I+ +KLQIWDTAGQE F+ I RSYYR +AG+L+VYDITRRETF ++ +WL +AR+
Sbjct: 61 NIRINNINVKLQIWDTAGQEDFKCIIRSYYRSSAGSLIVYDITRRETFQNIVNWLNEARE 120
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
+ N M ML+GNKCDL +R VS EEG++ A N +L++E SA+T QNVE+ F +TA
Sbjct: 121 NGNSQMVYMLIGNKCDLETQRQVSYEEGKELALSNDMLYIETSAKTQQNVEQVFSQTAYL 180
Query: 167 ILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDG 201
IL+ IQ G +D N +GIK+G QG G DG
Sbjct: 181 ILEKIQNGNIDPTNLNNGIKIG-QEIQGNQGNGDG 214
>gi|157126156|ref|XP_001660824.1| ras-related protein, putative [Aedes aegypti]
gi|108873366|gb|EAT37591.1| AAEL010430-PA [Aedes aegypti]
Length = 222
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 119/216 (55%), Positives = 148/216 (68%), Gaps = 9/216 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ IKLQIWDT
Sbjct: 5 YDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYD T R++FN LS+WL DAR A+ N+ I+LVGNK D
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDTTSRDSFNVLSNWLNDARTLASQNICILLVGNKKD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 125 MEEEREVTFLEASNFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERIG 184
Query: 183 SGIKVG---YGRGQGPSGARDGTVSQR------GGC 209
SGI+ G G G SG+R + +R GGC
Sbjct: 185 SGIQFGDTSKRSGAGQSGSRQQSSGRRRTPDCAGGC 220
>gi|344298301|ref|XP_003420832.1| PREDICTED: ras-related protein Rab-4B-like [Loxodonta africana]
Length = 218
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 129 DLEPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|126329307|ref|XP_001364508.1| PREDICTED: ras-related protein Rab-4B-like [Monodelphis domestica]
Length = 213
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLTNWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDSEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|159117831|ref|XP_001709135.1| Rab2b [Giardia lamblia ATCC 50803]
gi|157437250|gb|EDO81461.1| Rab2b [Giardia lamblia ATCC 50803]
Length = 227
Score = 229 bits (583), Expect = 6e-58, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 147/199 (73%), Gaps = 13/199 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI---DG--RPIKL 57
+ Y+FKYII+GD+ VGKSCLLL+F +++F P+HD+T+GVEF + + + DG + +K+
Sbjct: 6 HHYIFKYIIVGDSAVGKSCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTVKV 65
Query: 58 QIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLED----ARQHANPN-- 111
QIWDTAGQE FRSITRSYYRGAAGALLVYD+T R +F L WL+D A+PN
Sbjct: 66 QIWDTAGQEQFRSITRSYYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGV 125
Query: 112 --MSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
M IMLVGNK DL H+R VSKEEGEQFA+++GLLF+E SA+ NV E+F +TA IL+
Sbjct: 126 SGMVIMLVGNKTDLEHKRKVSKEEGEQFARDHGLLFIETSAKDDLNVSESFNETARTILE 185
Query: 170 NIQEGALDAVNDQSGIKVG 188
++ G +D V+ SG+K G
Sbjct: 186 KVETGEIDCVSKDSGVKAG 204
>gi|289741387|gb|ADD19441.1| GTPase Rab4 [Glossina morsitans morsitans]
Length = 214
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 146/209 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIENKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTTSRDSFNALNNWLNDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLEASA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLEASAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
SGI+ G + R +V++ C
Sbjct: 184 GSGIQYGGAALRNLQQTRQRSVNKPDCAC 212
>gi|291412180|ref|XP_002722362.1| PREDICTED: ras-related GTP-binding protein 4b [Oryctolagus
cuniculus]
Length = 213
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|148692254|gb|EDL24201.1| RAB4B, member RAS oncogene family [Mus musculus]
Length = 214
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 5 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 65 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 125 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 184
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 185 GSGIQYG 191
>gi|8394136|ref|NP_059051.1| ras-related protein Rab-4B [Rattus norvegicus]
gi|21313012|ref|NP_083667.1| ras-related protein Rab-4B [Mus musculus]
gi|1710026|sp|P51146.1|RAB4B_RAT RecName: Full=Ras-related protein Rab-4B
gi|46577105|sp|Q91ZR1.2|RAB4B_MOUSE RecName: Full=Ras-related protein Rab-4B
gi|929830|emb|CAA55339.1| ras-homologous GTPase rab4b [Rattus norvegicus]
gi|12837780|dbj|BAB23948.1| unnamed protein product [Mus musculus]
gi|13938060|gb|AAH07147.1| RAB4B, member RAS oncogene family [Mus musculus]
gi|66794563|gb|AAH96654.1| RAB4B, member RAS oncogene family [Mus musculus]
gi|74215321|dbj|BAE41875.1| unnamed protein product [Mus musculus]
gi|112292953|dbj|BAF02854.1| Rab4B [Mus musculus]
gi|149056539|gb|EDM07970.1| RAB4B, member RAS oncogene family [Rattus norvegicus]
Length = 213
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|410330929|gb|JAA34411.1| RAB4B, member RAS oncogene family [Pan troglodytes]
Length = 221
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 12 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 131
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 132 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 191
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 192 GSGIQYG 198
>gi|54792729|ref|NP_001003275.1| ras-related protein Rab-4B [Canis lupus familiaris]
gi|82659107|ref|NP_057238.3| ras-related protein Rab-4B [Homo sapiens]
gi|190360735|ref|NP_001121979.1| ras-related protein Rab-4B [Bos taurus]
gi|194215473|ref|XP_001499461.2| PREDICTED: ras-related protein Rab-4B-like [Equus caballus]
gi|301776645|ref|XP_002923738.1| PREDICTED: ras-related protein Rab-4B-like [Ailuropoda melanoleuca]
gi|311257582|ref|XP_003127192.1| PREDICTED: ras-related protein Rab-4B-like isoform 2 [Sus scrofa]
gi|348552490|ref|XP_003462060.1| PREDICTED: ras-related protein Rab-4B-like [Cavia porcellus]
gi|350585214|ref|XP_003481903.1| PREDICTED: ras-related protein Rab-4B-like [Sus scrofa]
gi|395859643|ref|XP_003802143.1| PREDICTED: ras-related protein Rab-4B [Otolemur garnettii]
gi|397482620|ref|XP_003812518.1| PREDICTED: ras-related protein Rab-4B [Pan paniscus]
gi|402905614|ref|XP_003915611.1| PREDICTED: ras-related protein Rab-4B [Papio anubis]
gi|403305336|ref|XP_003943223.1| PREDICTED: ras-related protein Rab-4B [Saimiri boliviensis
boliviensis]
gi|410983000|ref|XP_003997832.1| PREDICTED: ras-related protein Rab-4B [Felis catus]
gi|426242915|ref|XP_004015314.1| PREDICTED: ras-related protein Rab-4B [Ovis aries]
gi|46577634|sp|P61017.1|RAB4B_CANFA RecName: Full=Ras-related protein Rab-4B
gi|46577635|sp|P61018.1|RAB4B_HUMAN RecName: Full=Ras-related protein Rab-4B
gi|5640004|gb|AAD45923.1|AF165522_1 ras-related GTP-binding protein 4b [Homo sapiens]
gi|20379046|gb|AAM21083.1|AF498935_1 small GTP binding protein RAB4B [Homo sapiens]
gi|919|emb|CAA39800.1| rab4b [Canis lupus familiaris]
gi|28422140|gb|AAH46927.1| RAB4B, member RAS oncogene family [Homo sapiens]
gi|119577405|gb|EAW57001.1| hCG2044074, isoform CRA_b [Homo sapiens]
gi|119577410|gb|EAW57006.1| hCG1995540, isoform CRA_c [Homo sapiens]
gi|158455121|gb|AAI22835.2| RAB4B protein [Bos taurus]
gi|190690531|gb|ACE87040.1| RAB4B, member RAS oncogene family protein [synthetic construct]
gi|190691899|gb|ACE87724.1| RAB4B, member RAS oncogene family protein [synthetic construct]
gi|312151204|gb|ADQ32114.1| RAB4B, member RAS oncogene family [synthetic construct]
gi|380785613|gb|AFE64682.1| ras-related protein Rab-4B [Macaca mulatta]
gi|383419263|gb|AFH32845.1| ras-related protein Rab-4B [Macaca mulatta]
gi|384947736|gb|AFI37473.1| ras-related protein Rab-4B [Macaca mulatta]
gi|410217904|gb|JAA06171.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|410248748|gb|JAA12341.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|410288734|gb|JAA22967.1| RAB4B, member RAS oncogene family [Pan troglodytes]
gi|417397229|gb|JAA45648.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 213
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|443731104|gb|ELU16342.1| hypothetical protein CAPTEDRAFT_192455 [Capitella teleta]
Length = 211
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 140/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK+++IG G GKSC+L QF + +F+ + TIGVEFG+++V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLVIGSAGTGKSCILHQFIESKFKQDSNHTIGVEFGSKVVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RE++N L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRESYNALTNWLTDARTLASPNIVIILVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F++ A IL I+ G LD
Sbjct: 124 DLESEREVTFLEASRFAQENELMFLETSALTGENVEETFLRCARSILTKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQFG 190
>gi|89258415|gb|ABD65431.1| Rab4 [Suberites domuncula]
Length = 210
Score = 228 bits (582), Expect = 9e-58, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK+++IG+ GVGKSCLL QF +++F+ + TIGVEFG+++V I + +KLQ+WD
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEQKFKQDSNHTIGVEFGSKVVNISSKSVKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI+ RET+N L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISSRETYNSLTNWLTDARTLASPNIVIVLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L FLE SA T +NVEE F+K IL I G LD
Sbjct: 124 DLEADREVTFMEASRFAQENELSFLETSALTGENVEEVFLKCTRTILTKIDAGELDPDRV 183
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
SGI+ G + + P + T ++ C
Sbjct: 184 GSGIQYGNAQLRRPVPTQQ-TTKEKCSC 210
>gi|291225089|ref|XP_002732535.1| PREDICTED: ras-related protein Rab-4B-like [Saccoglossus
kowalevskii]
Length = 210
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG G GKSC+L QF + +F+ + TIGVEFG+++V + G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKFKQESNHTIGVEFGSKVVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALANWLADARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN ++FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLEADREVTFLEASRFAQENEMMFLETSALTGENVEEAFLKCARSILTKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|348534150|ref|XP_003454566.1| PREDICTED: ras-related protein Rab-4A-like [Oreochromis niloticus]
gi|432852543|ref|XP_004067300.1| PREDICTED: ras-related protein Rab-4A-like [Oryzias latipes]
Length = 213
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIISVVNKMVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTTWLSDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|327276363|ref|XP_003222939.1| PREDICTED: ras-related protein Rab-4B-like [Anolis carolinensis]
Length = 406
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 140/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+++V + G+ +KLQIWD
Sbjct: 197 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSKVVNVGGKTVKLQIWD 256
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 257 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 316
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 317 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIESGELDPERM 376
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 377 GSGIQYG 383
>gi|402858726|ref|XP_003893843.1| PREDICTED: ras-related protein Rab-4A [Papio anubis]
Length = 218
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|195023648|ref|XP_001985725.1| GH20926 [Drosophila grimshawi]
gi|193901725|gb|EDW00592.1| GH20926 [Drosophila grimshawi]
Length = 213
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTTSRDSFNALTNWLNDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|15986733|gb|AAL11725.1|AF408432_1 GTP-binding protein RAB4 [Mus musculus]
Length = 213
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIGSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|332252118|ref|XP_003275201.1| PREDICTED: ras-related protein Rab-4A isoform 2 [Nomascus
leucogenys]
Length = 218
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 SYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|84579867|ref|NP_001033774.1| ras-related protein Rab-4A [Bos taurus]
gi|240849289|ref|NP_001155335.1| ras-related protein Rab-4A [Ovis aries]
gi|83759139|gb|AAI10199.1| RAB4A, member RAS oncogene family [Bos taurus]
gi|238566742|gb|ACR46626.1| RAB4A [Ovis aries]
gi|296472279|tpg|DAA14394.1| TPA: ras-related protein Rab-4A [Bos taurus]
Length = 218
Score = 228 bits (580), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPSAQECG 217
>gi|410912076|ref|XP_003969516.1| PREDICTED: ras-related protein Rab-4A-like [Takifugu rubripes]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 141/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++ + + +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIINVVSKMVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTTWLSDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|195425455|ref|XP_002061020.1| GK10719 [Drosophila willistoni]
gi|194157105|gb|EDW72006.1| GK10719 [Drosophila willistoni]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTTSRDSFNALANWLNDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|311271203|ref|XP_001925518.2| PREDICTED: ras-related protein Rab-4A-like [Sus scrofa]
gi|410975123|ref|XP_003993984.1| PREDICTED: ras-related protein Rab-4A isoform 1 [Felis catus]
gi|410975125|ref|XP_003993985.1| PREDICTED: ras-related protein Rab-4A isoform 2 [Felis catus]
gi|417397315|gb|JAA45691.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 218
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPSAQECG 217
>gi|354486278|ref|XP_003505308.1| PREDICTED: ras-related protein Rab-4B-like [Cricetulus griseus]
Length = 228
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+VT+ G+ +KLQIWDT
Sbjct: 20 YDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVTVGGKTVKLQIWDT 79
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK D
Sbjct: 80 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKD 139
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 140 LELELEVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMG 199
Query: 183 SGIKVGY 189
SGI+ G+
Sbjct: 200 SGIQYGH 206
>gi|17647849|ref|NP_523777.1| Rab4, isoform B [Drosophila melanogaster]
gi|24654467|ref|NP_725696.1| Rab4, isoform A [Drosophila melanogaster]
gi|194755864|ref|XP_001960199.1| GF11646 [Drosophila ananassae]
gi|194880774|ref|XP_001974537.1| GG21802 [Drosophila erecta]
gi|195150545|ref|XP_002016211.1| GL11470 [Drosophila persimilis]
gi|195335295|ref|XP_002034310.1| GM21805 [Drosophila sechellia]
gi|195487842|ref|XP_002092063.1| GE11879 [Drosophila yakuba]
gi|195584276|ref|XP_002081940.1| GD11294 [Drosophila simulans]
gi|198457357|ref|XP_001360633.2| GA18527 [Drosophila pseudoobscura pseudoobscura]
gi|6561901|dbj|BAA88243.1| Rab4 protein [Drosophila melanogaster]
gi|7302753|gb|AAF57831.1| Rab4, isoform A [Drosophila melanogaster]
gi|21627057|gb|AAM68480.1| Rab4, isoform B [Drosophila melanogaster]
gi|190621497|gb|EDV37021.1| GF11646 [Drosophila ananassae]
gi|190657724|gb|EDV54937.1| GG21802 [Drosophila erecta]
gi|194110058|gb|EDW32101.1| GL11470 [Drosophila persimilis]
gi|194126280|gb|EDW48323.1| GM21805 [Drosophila sechellia]
gi|194178164|gb|EDW91775.1| GE11879 [Drosophila yakuba]
gi|194193949|gb|EDX07525.1| GD11294 [Drosophila simulans]
gi|198135948|gb|EAL25208.2| GA18527 [Drosophila pseudoobscura pseudoobscura]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|318270757|ref|NP_001188141.1| ras-related protein Rab-4B [Ictalurus punctatus]
gi|308323203|gb|ADO28738.1| ras-related protein rab-4b [Ictalurus punctatus]
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCARTILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|90103015|sp|Q2TBH7.2|RAB4A_BOVIN RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 184 GSGIQYGDAALRQLRSPRRAQAPSAQECG 212
>gi|328869838|gb|EGG18213.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 200
Score = 228 bits (580), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 106/175 (60%), Positives = 131/175 (74%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYI++GD+ VGKS LLLQF DKRF P D TIGVEFG+R + ID +KLQIWDT
Sbjct: 23 YSHLFKYIMVGDSAVGKSNLLLQFVDKRFSPNSDFTIGVEFGSRSINIDNNQVKLQIWDT 82
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRSITR+YYRGA GAL+VYDITRRETF L++WL D R++++ +++I+LVGNKCD
Sbjct: 83 AGQEKFRSITRAYYRGAVGALIVYDITRRETFEGLANWLTDCRKYSSTDVTIVLVGNKCD 142
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
L R VS E FA E+GLLF E SA+T NV+EAF +TA I + + D
Sbjct: 143 LEASRQVSYAEASSFANEHGLLFFETSAKTGSNVDEAFEQTAKIIFERTKNNPQD 197
>gi|357625222|gb|EHJ75731.1| ras-related GTP-binding protein 4b [Danaus plexippus]
Length = 214
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 112/189 (59%), Positives = 138/189 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFK++IIG G GKS LL F +F+ TIGVEFG++++ I G+ KLQIWD
Sbjct: 4 SYEYLFKFLIIGSAGTGKSSLLNNFLGNKFKEDRCHTIGVEFGSKIINIGGKSTKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD+T R++FN LS+WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDVTSRDSFNALSNWLRDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E QFA+EN L+FLE SART +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEGSREVTFTEASQFAQENELMFLETSARTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVGYG 190
SGI+ G G
Sbjct: 184 GSGIQYGTG 192
>gi|201066145|gb|ACH92482.1| FI09101p [Drosophila melanogaster]
Length = 257
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 48 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 107
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 108 TAGQERFRSVTRSYYRGAAGALLVYDATSRDSFNALTNWLNDARTLASPNIVILLVGNKK 167
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 168 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 227
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 228 GSGIQYG 234
>gi|355714956|gb|AES05175.1| RAB4A, member RAS oncoprotein family [Mustela putorius furo]
Length = 224
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 16 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 75
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 76 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 135
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 136 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 195
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 196 GSGIQYGDAALRQLRSPRRAQAPSAQECG 224
>gi|170049667|ref|XP_001857982.1| ras-related protein [Culex quinquefasciatus]
gi|167871403|gb|EDS34786.1| ras-related protein [Culex quinquefasciatus]
Length = 227
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 113/187 (60%), Positives = 137/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ IKLQIWD
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN LS+WL DAR A+ N+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDSTSRDSFNVLSNWLNDARTLASQNICILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SART +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEEREVTFLEASTFAQENELIFLETSARTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|195124760|ref|XP_002006855.1| GI18364 [Drosophila mojavensis]
gi|193911923|gb|EDW10790.1| GI18364 [Drosophila mojavensis]
Length = 213
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDSTSRDSFNALTNWLNDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|145491373|ref|XP_001431686.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124398791|emb|CAK64288.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 146/187 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFK+IIIGD+ VGKSCLLLQF D++F+ HD TIGVEFG++ + I + IKLQIWD
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESF+SITRSYYRG+ AL+VYD+T R++F ++S W+E+ + +AN ++++LV NK
Sbjct: 63 TAGQESFKSITRSYYRGSICALIVYDVTSRDSFENISRWMEETKSYANDKITLVLVANKT 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL+ +R +S EEG+ FAK++ L+F+EASA+T V++ F + A +L+ I++ +DA N+
Sbjct: 123 DLSDKRVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAVLKKIEQRDIDATNE 182
Query: 182 QSGIKVG 188
G+++G
Sbjct: 183 SIGVRIG 189
>gi|57524538|ref|NP_001004002.1| ras-related protein Rab-4B [Danio rerio]
gi|62901076|sp|Q68EK7.1|RAB4B_DANRE RecName: Full=Ras-related protein Rab-4B
gi|51330885|gb|AAH80219.1| Zgc:101015 [Danio rerio]
Length = 213
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A I I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|148224903|ref|NP_001080671.1| RAB4A, member RAS oncogene family [Xenopus laevis]
gi|27924185|gb|AAH44974.1| Rab4a-prov protein [Xenopus laevis]
Length = 213
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKFKQDSNHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIASRETYNALTNWLTDARTLASPNIIIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILSKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 WSGIQYG 190
>gi|50741401|ref|XP_419573.1| PREDICTED: ras-related protein Rab-4A [Gallus gallus]
Length = 218
Score = 227 bits (579), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|407404146|gb|EKF29737.1| hypothetical protein MOQ_006467 [Trypanosoma cruzi marinkellei]
Length = 211
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD GVGKSCL+ +FT++RF+ TIGVEFG V I+G +KLQIW
Sbjct: 1 MSHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYD++RRETF+ + +WL+DAR + NP+ +MLVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE +FA EN LLF+E SA NVE+AF+ TA KI + + G L+ +
Sbjct: 121 SDLDESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPGD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|71661053|ref|XP_817553.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70882752|gb|EAN95702.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD GVGKSCL+ +FT++RF+ TIGVEFG V I+G +KLQIW
Sbjct: 1 MSHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYD++RRETF+ + +WL+DAR + NP+ +MLVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE +FA EN LLF+E SA NVE+AF+ TA KI + + G L+ +
Sbjct: 121 SDLDESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPGD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|62859319|ref|NP_001016987.1| RAB4B member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271275|emb|CAJ83371.1| RAB4B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|195539619|gb|AAI68000.1| hypothetical protein LOC549741 [Xenopus (Silurana) tropicalis]
Length = 213
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIASRETYNALTNWLTDARTLASPNIIIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILSKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 WSGIQYG 190
>gi|395529334|ref|XP_003766771.1| PREDICTED: ras-related protein Rab-4B [Sarcophilus harrisii]
Length = 229
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
S D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 20 SPDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 79
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 80 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLTNWLTDARTLASPNIVVILCGNKK 139
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 140 DLDSEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 199
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 200 GSGIQYG 206
>gi|387018008|gb|AFJ51122.1| ras-related protein rab-4b [Crotalus adamanteus]
Length = 213
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 144/208 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+++VT+ G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGAGKSCLLHQFIESKFKQDSNHTIGVEFGSKVVTVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASLNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIESGELDPERM 183
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
SG++ G Q R R C
Sbjct: 184 GSGVQYGDASLQQLRQPRSSQAQTRQQC 211
>gi|71661548|ref|XP_817794.1| hypothetical protein [Trypanosoma cruzi strain CL Brener]
gi|70883006|gb|EAN95943.1| hypothetical protein, conserved [Trypanosoma cruzi]
Length = 211
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD GVGKSCL+ +FT++RF+ TIGVEFG V I+G +KLQIW
Sbjct: 1 MSHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYD++RRETF+ + +WL+DAR + NP+ +MLVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE +FA EN LLF+E SA NVE+AF+ TA KI + + G L+ +
Sbjct: 121 SDLDESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPGD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|321468798|gb|EFX79781.1| hypothetical protein DAPPUDRAFT_304304 [Daphnia pulex]
Length = 216
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 107/187 (57%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
++++LFK+++IG G GKSCLL F +K+F+ TIGVEFG+++VTI G+ +KLQIWD
Sbjct: 4 NFEFLFKFLVIGSAGTGKSCLLHHFIEKKFKQDSSHTIGVEFGSKIVTIGGKQVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE F+S+T+SYYRGAAGALLVYDI+ RE++N +S+WL DA+ ANPN+ ++LVGNK
Sbjct: 64 TAGQERFKSVTKSYYRGAAGALLVYDISSRESYNAVSNWLTDAQNLANPNLVVLLVGNKR 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R VS E QFA+EN L+FLEASA T +NVEEAF++ A IL ++ G LD
Sbjct: 124 DLEEDRQVSFLEASQFAQENDLMFLEASALTGENVEEAFLQCAKTILSKVETGELDPNKL 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQHG 190
>gi|307173866|gb|EFN64623.1| Ras-related protein Rab-14 [Camponotus floridanus]
gi|307200826|gb|EFN80879.1| Ras-related protein Rab-14 [Harpegnathos saltator]
Length = 199
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/171 (63%), Positives = 134/171 (78%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWDTAGQE FR++TRSY
Sbjct: 2 GVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWDTAGQERFRAVTRSY 61
Query: 76 YRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGE 135
YRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK DL +R V+ EE +
Sbjct: 62 YRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKSDLEGQRDVTYEEAK 121
Query: 136 QFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIK 186
QFA E+GL+F+EASA+T NVEEAF++TA KI Q+IQ+G LD +SG++
Sbjct: 122 QFADEHGLMFVEASAKTGHNVEEAFLETAKKIFQSIQDGRLDLNAAESGVQ 172
>gi|194206066|ref|XP_001498005.2| PREDICTED: ras-related protein Rab-4A-like [Equus caballus]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|432890268|ref|XP_004075447.1| PREDICTED: ras-related protein Rab-4B-like [Oryzias latipes]
Length = 213
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVINVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N LS+WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALSNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K A IL I G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|407866814|gb|EKG08400.1| hypothetical protein TCSYLVIO_000448 [Trypanosoma cruzi]
Length = 211
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 140/187 (74%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD GVGKSCL+ +FT++RF+ TIGVEFG V I+G +KLQIW
Sbjct: 1 MSHKYIFKYIIIGDMGVGKSCLMQRFTEQRFRNDLPHTIGVEFGTITVDINGETVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYD++RRETF+ + +WL+DAR + NP+ +MLVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDVSRRETFSRIGTWLQDARGNTNPHTVMMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE +FA EN LLF+E SA NVE+AF+ TA KI + + G L+ +
Sbjct: 121 SDLDESREVSYEEAVKFADENNLLFVECSALNGDNVEQAFLSTAHKIHEKVMCGILNPGD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|19923260|ref|NP_004569.2| ras-related protein Rab-4A isoform 1 [Homo sapiens]
gi|383873316|ref|NP_001244480.1| ras-related protein Rab-4A [Macaca mulatta]
gi|296230239|ref|XP_002760619.1| PREDICTED: ras-related protein Rab-4A [Callithrix jacchus]
gi|297661712|ref|XP_002809375.1| PREDICTED: ras-related protein Rab-4A [Pongo abelii]
gi|332252116|ref|XP_003275200.1| PREDICTED: ras-related protein Rab-4A isoform 1 [Nomascus
leucogenys]
gi|397508091|ref|XP_003824504.1| PREDICTED: ras-related protein Rab-4A [Pan paniscus]
gi|402858724|ref|XP_003893842.1| PREDICTED: ras-related protein Rab-4A [Papio anubis]
gi|403300136|ref|XP_003940812.1| PREDICTED: ras-related protein Rab-4A [Saimiri boliviensis
boliviensis]
gi|20379044|gb|AAM21082.1|AF498934_1 small GTP binding protein RAB4A [Homo sapiens]
gi|12803249|gb|AAH02438.1| RAB4A, member RAS oncogene family [Homo sapiens]
gi|13279194|gb|AAH04309.1| RAB4A, member RAS oncogene family [Homo sapiens]
gi|50981015|gb|AAT91347.1| HRES-1 antisense Rab [Homo sapiens]
gi|117644706|emb|CAL37818.1| hypothetical protein [synthetic construct]
gi|117645990|emb|CAL38462.1| hypothetical protein [synthetic construct]
gi|119590296|gb|EAW69890.1| RAB4A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119590300|gb|EAW69894.1| RAB4A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|123984433|gb|ABM83562.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|123998397|gb|ABM86800.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|189054036|dbj|BAG36543.1| unnamed protein product [Homo sapiens]
gi|208965410|dbj|BAG72719.1| RAB4A, member RAS oncogene family [synthetic construct]
gi|380815226|gb|AFE79487.1| ras-related protein Rab-4A [Macaca mulatta]
gi|383420427|gb|AFH33427.1| ras-related protein Rab-4A [Macaca mulatta]
gi|384948556|gb|AFI37883.1| ras-related protein Rab-4A [Macaca mulatta]
gi|410227434|gb|JAA10936.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410261354|gb|JAA18643.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410292912|gb|JAA25056.1| RAB4A, member RAS oncogene family [Pan troglodytes]
gi|410338349|gb|JAA38121.1| RAB4A, member RAS oncogene family [Pan troglodytes]
Length = 218
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|395836166|ref|XP_003791035.1| PREDICTED: ras-related protein Rab-4A [Otolemur garnettii]
Length = 218
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|225706796|gb|ACO09244.1| Ras-related protein Rab-4A [Osmerus mordax]
Length = 213
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAFI+ A KIL I+ G LD
Sbjct: 124 DLDAEREVTFLEASRFAQENELMFLETSALTGENVEEAFIQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|340504779|gb|EGR31194.1| hypothetical protein IMG5_116200 [Ichthyophthirius multifiliis]
Length = 221
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 103/186 (55%), Positives = 140/186 (75%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+I+IG+T VGKSCLL QFT+ RF+ HD TIGVEFG++ + ++ IK+QIWDT
Sbjct: 4 YNYLFKFILIGNTCVGKSCLLSQFTEGRFKKEHDATIGVEFGSKNILVNDTVIKIQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYYRG+ G+LL++DIT +E+F+ L WL + +AN ++S +++GNK D
Sbjct: 64 AGQESFKSITRSYYRGSIGSLLIFDITHKESFDSLQMWLNEVINNANKSLSFIVIGNKID 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R V+ EE +QFAKEN +++E SA T +NVE AF + A +IL IQ +D N
Sbjct: 124 LIGKRQVTYEEAQQFAKENNFIYIETSALTGENVENAFKQIAEEILNKIQNKEIDPNNHN 183
Query: 183 SGIKVG 188
SGIKVG
Sbjct: 184 SGIKVG 189
>gi|410909864|ref|XP_003968410.1| PREDICTED: ras-related protein Rab-4B-like [Takifugu rubripes]
Length = 213
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K A IL I G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|348526698|ref|XP_003450856.1| PREDICTED: ras-related protein Rab-4B-like [Oreochromis niloticus]
Length = 213
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K A IL I G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|29337213|sp|P20338.2|RAB4A_HUMAN RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|195380842|ref|XP_002049170.1| GJ21435 [Drosophila virilis]
gi|194143967|gb|EDW60363.1| GJ21435 [Drosophila virilis]
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 137/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDYLFKFLIIGSAGSGKSCLLHHFIESKFKDDSSHTIGVEFGSRIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L++WL DAR +PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTTTRDSFNALTNWLNDARTLVSPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEARDVTFLEASTFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|62897579|dbj|BAD96729.1| RAB4A, member RAS oncogene family variant [Homo sapiens]
Length = 218
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKGDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|160222046|sp|P05714.2|RAB4A_RAT RecName: Full=Ras-related protein Rab-4A
Length = 213
Score = 226 bits (577), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 184 GSGIQYGDAALRQLRSPRRTQAPSAQECG 212
>gi|375153504|gb|AFA36651.1| small GTPase Rab4b [Helicoverpa armigera]
Length = 214
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 143/209 (68%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFK++++G G GKS LL F +F+ TIGVEFG+++V I G+ KLQ+WD
Sbjct: 4 SYEYLFKFLVVGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQMWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT R++FN LS+WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALSNWLRDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ R V+ E QFA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DMEESREVTFTEASQFAQENELMFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
SGI+ G G + S + S C
Sbjct: 184 GSGIQYGTGTSKRLSAPKKPARSPSDCAC 212
>gi|77404180|ref|NP_037151.2| ras-related protein Rab-4A [Rattus norvegicus]
gi|38303943|gb|AAH62016.1| RAB4A, member RAS oncogene family [Rattus norvegicus]
Length = 218
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>gi|344247266|gb|EGW03370.1| Ras-related protein Rab-4A [Cricetulus griseus]
Length = 218
Score = 226 bits (576), Expect = 4e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>gi|29841087|gb|AAP06100.1| SJCHGC09497 protein [Schistosoma japonicum]
Length = 224
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 114/217 (52%), Positives = 151/217 (69%), Gaps = 8/217 (3%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYII+GD GVGKSCL+ QFT+K+F P TIGVEF ++V ++ + +K+QIWD
Sbjct: 8 NYSYIFKYIIVGDMGVGKSCLMHQFTEKKFIPDCPHTIGVEFATKIVEVNDQKVKIQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAG LLVYDITR+ TF + +WL DAR+ +P+ I L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGVLLVYDITRKLTFTRIQTWLTDARRLTSPDTVIFLIGNKA 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGA--LDAV 179
DL +R V+ EE + A EN L+FLE SA++ NVEE FI+TA KI QN+Q G+ L++V
Sbjct: 128 DLDGQRDVTFEEAKLVADENDLMFLECSAKSGANVEEVFIETARKIFQNVQHGSVYLNSV 187
Query: 180 N----DQSGIKVGYGRGQGPSG--ARDGTVSQRGGCC 210
+ +S + G GR G + DGT Q G C
Sbjct: 188 DGSVLGKSSLNSGTGRNSVELGNSSTDGTTRQGGCAC 224
>gi|307777766|dbj|BAJ21279.1| Rab-family small GTPase Rab2C [Tetrahymena thermophila]
Length = 223
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 106/201 (52%), Positives = 145/201 (72%), Gaps = 1/201 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFK+I+IGD+GVGKSCL+LQFT+ + HD+TIGVEFG ++V IDG+ IKLQIWD
Sbjct: 3 SYYYLFKFIVIGDSGVGKSCLVLQFTENYIRKNHDVTIGVEFGVKIVQIDGKNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRS+TR+YYR A GA++VYDI+RR++F H++ W+++ + + N NM ++L+GNK
Sbjct: 63 TAGQENFRSLTRAYYRTAIGAIVVYDISRRDSFLHINDWIKEMKSNGNQNMVVLLIGNKK 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D +R V EEG+ A ENG LF E SAR + NV+EAF K A +I + + G + + D
Sbjct: 123 DKESQRQVQTEEGQAVANENGFLFFETSARDSINVDEAFTKLAEQITRKVDSGEI-PIGD 181
Query: 182 QSGIKVGYGRGQGPSGARDGT 202
IK+G S +RD T
Sbjct: 182 NQTIKIGAEYSFYQSKSRDQT 202
>gi|34194035|gb|AAH56535.1| Rab4a protein, partial [Danio rerio]
Length = 217
Score = 226 bits (576), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWD
Sbjct: 8 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 68 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 128 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 187
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 188 GSGIQYG 194
>gi|401407536|ref|XP_003883217.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117633|emb|CBZ53185.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 214
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/183 (59%), Positives = 137/183 (74%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+IIIGD G GKSCLL QF + +F+ TIGVEFG++M+ I G+ IKLQIWDT
Sbjct: 11 YDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGCSHTIGVEFGSKMINIAGKRIKLQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +RS+TRSYYRGAAGALLVYDI+ R+++NHL +WL DAR A ++SI+ VGNK D
Sbjct: 71 AGQERYRSVTRSYYRGAAGALLVYDISNRDSYNHLMNWLADARSLARADISIIAVGNKVD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAVS E +FA+EN +LFLE SA T + VE+ F+K A IL I++G +D
Sbjct: 131 LKEKRAVSFLEASRFAQENDILFLETSAFTGEGVEDVFVKVARLILNKIEDGLIDPNTMI 190
Query: 183 SGI 185
SGI
Sbjct: 191 SGI 193
>gi|226823210|ref|NP_001119853.1| ras-related protein Rab-4A [Danio rerio]
gi|62901087|sp|Q6PHI9.2|RAB4A_DANRE RecName: Full=Ras-related protein Rab-4A
gi|190338615|gb|AAI63901.1| RAB4a, member RAS oncogene family [Danio rerio]
gi|190338617|gb|AAI63906.1| RAB4a, member RAS oncogene family [Danio rerio]
Length = 213
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|92098401|gb|AAI14772.1| RAB4A, member RAS oncogene family [Bos taurus]
Length = 218
Score = 226 bits (575), Expect = 6e-57, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 146/209 (69%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAG LLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGELLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPSAQECG 217
>gi|145522440|ref|XP_001447064.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831433|emb|CAI39304.1| rab_A70 [Paramecium tetraurelia]
gi|124414564|emb|CAK79667.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 146/187 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFK+IIIGD+ VGKSCLLLQF D++F+ HD TIGVEFG++ + I + IKLQIWD
Sbjct: 3 SYAYLFKFIIIGDSSVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESF+SITRSYYRG+ AL+VYD+T R++F +++ W+E+ + +AN ++++LV NK
Sbjct: 63 TAGQESFKSITRSYYRGSICALIVYDVTSRDSFENITRWMEETKSYANDKITLVLVANKT 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL+ +R +S EEG+ FAK++ L+F+EASA+T V++ F + A +L+ I++ +DA N+
Sbjct: 123 DLSDKRVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAVLKKIEQRDIDATNE 182
Query: 182 QSGIKVG 188
G+++G
Sbjct: 183 SIGVRIG 189
>gi|355697981|gb|EHH28529.1| hypothetical protein EGK_18983, partial [Macaca mulatta]
Length = 163
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/174 (64%), Positives = 126/174 (72%), Gaps = 35/174 (20%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
+GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 1 SGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 60
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEG 134
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK +L
Sbjct: 61 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSNL----------- 109
Query: 135 EQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
AFI TA +I + IQEG D N+ +GIK+G
Sbjct: 110 ------------------------AFINTAKEIYEKIQEGVFDINNEANGIKIG 139
>gi|159024328|gb|ABW87378.1| small GTP-binding protein Rab4 [Aiptasia pulchella]
Length = 217
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 147/207 (71%), Gaps = 9/207 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG G GKSC+L QF + +F+ TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIINVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI+ RETFN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA + +NVEE F+K + IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENDLIFLETSALSGENVEEGFLKCSRTILNKIESGELDPDRM 183
Query: 182 QSGIKVG---------YGRGQGPSGAR 199
SGI+ G GRG+G S ++
Sbjct: 184 GSGIQYGDPSLRRTLRPGRGRGESRSK 210
>gi|171184402|ref|NP_033029.2| ras-related protein Rab-4A [Mus musculus]
gi|74183520|dbj|BAE36619.1| unnamed protein product [Mus musculus]
gi|74202133|dbj|BAE23048.1| unnamed protein product [Mus musculus]
gi|112292951|dbj|BAF02853.1| Rab4A [Mus musculus]
gi|148679808|gb|EDL11755.1| RAB4A, member RAS oncogene family, isoform CRA_b [Mus musculus]
Length = 218
Score = 226 bits (575), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>gi|254281345|ref|NP_001156852.1| ras-related protein Rab-2B isoform 2 [Homo sapiens]
gi|194373967|dbj|BAG62296.1| unnamed protein product [Homo sapiens]
Length = 170
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 131/170 (77%), Gaps = 6/170 (3%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
MV IDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQ
Sbjct: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
H++ NM IML+GNK DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +
Sbjct: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKE 120
Query: 167 ILQNIQEGALDAVNDQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
I + IQ+G D N+ +GIK+G GPS ++ + + GCC
Sbjct: 121 IYRKIQQGLFDVHNEANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 170
>gi|147899878|ref|NP_001087008.1| RAB4B member RAS oncogene family [Xenopus laevis]
gi|50416282|gb|AAH77886.1| Rab14-prov protein [Xenopus laevis]
Length = 213
Score = 225 bits (574), Expect = 7e-57, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIESKFKQDSNHTIGVEFGSRIVNVASKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIASRETYNALTNWLTDARTLASPNIIIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 WSGIQYG 190
>gi|167534607|ref|XP_001748979.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163772659|gb|EDQ86309.1| predicted protein [Monosiga brevicollis MX1]
Length = 221
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 117/220 (53%), Positives = 147/220 (66%), Gaps = 15/220 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKR-----FQP------VHDLTIGVEFGARMVTI 50
+Y Y+FKYIIIGD GVGKSCLL QFT+++ P + L + +E A +
Sbjct: 6 NYTYIFKYIIIGDMGVGKSCLLHQFTEQKCTRRSLSPHSWLIALTPLVLSLE-PASSRHV 64
Query: 51 DGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP 110
G+ IKLQIWDTAGQE FR++TRSYYRGAAGALLVYDI RR T+NHL SWL DAR NP
Sbjct: 65 CGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALLVYDICRRSTYNHLQSWLNDARNLTNP 124
Query: 111 NMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 170
N I L+GNK DL +R V+ EE +QFA EN L+FLE SA+T NVE+AF++TA +I QN
Sbjct: 125 NTVIFLIGNKSDLEAQRDVTTEEAKQFADENNLIFLETSAKTGANVEDAFLETAKQIYQN 184
Query: 171 IQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IQ+G+LD +SG++ G P + + GCC
Sbjct: 185 IQDGSLDLNAAESGVQQKSQSGSVPLSEK---APGKSGCC 221
>gi|348575568|ref|XP_003473560.1| PREDICTED: ras-related protein Rab-4A-like [Cavia porcellus]
Length = 218
Score = 225 bits (574), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ ++ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQSIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>gi|281340730|gb|EFB16314.1| hypothetical protein PANDA_012940 [Ailuropoda melanoleuca]
Length = 208
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 137/185 (74%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD S
Sbjct: 121 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGS 180
Query: 184 GIKVG 188
GI+ G
Sbjct: 181 GIQYG 185
>gi|187951075|gb|AAI38509.1| RAB4A, member RAS oncogene family [Mus musculus]
Length = 213
Score = 225 bits (573), Expect = 9e-57, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 184 GSGIQYGDAALRQLRSPRRTQAPSAQECG 212
>gi|156389663|ref|XP_001635110.1| predicted protein [Nematostella vectensis]
gi|156222200|gb|EDO43047.1| predicted protein [Nematostella vectensis]
Length = 217
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 144/202 (71%), Gaps = 9/202 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSC+L QF + +F+ TIGVEFG+++V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCILHQFIEGKFKQDSSHTIGVEFGSKIVNVGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI+ RETFN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISSRETFNSLTNWLTDARTLASPNIVIILVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K + IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCSRTILNKIESGELDPDRM 183
Query: 182 QSGIKVG---------YGRGQG 194
SGI+ G GRG+G
Sbjct: 184 GSGIQYGDPSMRRSIRPGRGRG 205
>gi|431920194|gb|ELK18233.1| Ras-related protein Rab-4B [Pteropus alecto]
Length = 219
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 137/185 (74%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTA
Sbjct: 12 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 71
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 72 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 131
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD S
Sbjct: 132 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGS 191
Query: 184 GIKVG 188
GI+ G
Sbjct: 192 GIQYG 196
>gi|167519727|ref|XP_001744203.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777289|gb|EDQ90906.1| predicted protein [Monosiga brevicollis MX1]
Length = 209
Score = 225 bits (573), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ GKSCLL QF + +F+ TIGVEFG+++V G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGNASTGKSCLLHQFIESKFKSESSHTIGVEFGSKVVNCGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RE++N L++WL DAR A+P++ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIANRESYNALTNWLTDARTMASPDIVIVLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SART +NVEE F+K A IL I+ G LD
Sbjct: 124 DLEADREVTFLEASRFAQENELMFLETSARTGENVEEVFLKCARTILSKIEAGQLDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|308321550|gb|ADO27926.1| ras-related protein rab-4b [Ictalurus furcatus]
Length = 213
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 137/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGITVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDIPSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEE F+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEGFLKCARTILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGIK G
Sbjct: 184 GSGIKYG 190
>gi|550068|gb|AAA60244.1| GTP-binding protein [Homo sapiens]
Length = 213
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T ++VEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGEDVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|10441901|gb|AAG17228.1|AF217985_1 unknown [Homo sapiens]
gi|119577404|gb|EAW57000.1| hCG2044074, isoform CRA_a [Homo sapiens]
gi|119577408|gb|EAW57004.1| hCG1995540, isoform CRA_a [Homo sapiens]
Length = 248
Score = 224 bits (572), Expect = 1e-56, Method: Compositional matrix adjust.
Identities = 109/185 (58%), Positives = 137/185 (74%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTA
Sbjct: 41 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 100
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 101 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 160
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD S
Sbjct: 161 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGS 220
Query: 184 GIKVG 188
GI+ G
Sbjct: 221 GIQYG 225
>gi|340371749|ref|XP_003384407.1| PREDICTED: ras-related protein Rab-4B-like [Amphimedon
queenslandica]
Length = 213
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 113/210 (53%), Positives = 146/210 (69%), Gaps = 2/210 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK+++IG+ GVGKSCLL QF + +F+ + TIGVEFG+++V++ + +KLQ+WD
Sbjct: 4 SYDYLFKFLVIGNAGVGKSCLLHQFIEHKFKQDSNHTIGVEFGSKVVSLANKSVKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI+ RET+N L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISSRETYNALTNWLTDARTLASPNIVIVLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L FLE SA T +NVEE F K IL I G LD
Sbjct: 124 DLESDREVTFMEASRFAQENELAFLETSALTGENVEEVFQKCTRSILTKIDAGELDPDRV 183
Query: 182 QSGIKVGYG--RGQGPSGARDGTVSQRGGC 209
SGI+ G R G ++G ++ C
Sbjct: 184 GSGIQYGNATVRRVTQPGQKEGGNKEKCSC 213
>gi|237831345|ref|XP_002364970.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962634|gb|EEA97829.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221487179|gb|EEE25425.1| RAB-2,4,14, putative [Toxoplasma gondii GT1]
gi|221506865|gb|EEE32482.1| GTP-binding protein rab2, putative [Toxoplasma gondii VEG]
Length = 214
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/183 (59%), Positives = 137/183 (74%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+IIIGD G GKSCLL QF + +F+ TIGVEFG++++ I G+ IKLQIWDT
Sbjct: 11 YDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGCSHTIGVEFGSKLINIAGKRIKLQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +RS+TRSYYRGAAGALLVYDI+ R+++NHL +WL DAR A ++SI+ VGNK D
Sbjct: 71 AGQERYRSVTRSYYRGAAGALLVYDISNRDSYNHLMNWLADARSLARADISIIAVGNKVD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAVS E +FA+EN +LFLE SA T + VE+ F+K A IL I++G +D
Sbjct: 131 LKEKRAVSFLEASRFAQENDILFLETSAFTGEGVEDVFVKVARLILNKIEDGLIDPNTMI 190
Query: 183 SGI 185
SGI
Sbjct: 191 SGI 193
>gi|126654505|ref|XP_001388423.1| hypothetical protein [Cryptosporidium parvum Iowa II]
gi|126117363|gb|EAZ51463.1| hypothetical protein cgd8_1040 [Cryptosporidium parvum Iowa II]
Length = 216
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 141/208 (67%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+I+IGD G GKSCLL QF + +F+ TIGVEFG++++T G+ IKLQIWDT
Sbjct: 9 YDYLFKFIVIGDAGAGKSCLLHQFIENKFKKGSSHTIGVEFGSKIITAGGKRIKLQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +RS+TRSYYRGAAGAL+VYDIT RE++NHL +WL DAR A ++SI+ VGNK D
Sbjct: 69 AGQERYRSVTRSYYRGAAGALIVYDITNRESYNHLVNWLADARTLARVDISIIGVGNKLD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R V+ E + A+EN +LFLE SA T + VEE F+K IL I++G +D
Sbjct: 129 LKDKRQVTFLEASRCAQENDILFLETSALTGEGVEEVFVKVTRLILSKIEDGTIDPSTMT 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S R Q S ++D G CC
Sbjct: 189 SSGVQAPSRAQLTSSSKDDETRSSGRCC 216
>gi|326436079|gb|EGD81649.1| whole genome shotgun sequence assembly [Salpingoeca sp. ATCC 50818]
Length = 209
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/187 (56%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG+ GKSC+L QF + +F+ TIGVEFG++++ G+ +KLQ+WD
Sbjct: 4 SYDFLFKFLVIGNANTGKSCILHQFIENKFKSDSTHTIGVEFGSKVINCGGKSVKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI+ RE+FN L++WL DAR A+P++ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDISNRESFNALTNWLTDARTLASPDIVIVLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SART +NVEE F+K A IL I+ G LD
Sbjct: 124 DLEADREVTFLEASRFAQENELMFLETSARTGENVEEVFLKCARSILSKIETGQLDPEKI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|3024519|sp|P56371.1|RAB4A_MOUSE RecName: Full=Ras-related protein Rab-4A
gi|2706878|dbj|BAA24034.1| rab 4 [Mus musculus]
Length = 213
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIG+EFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGMEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 184 GSGIQYGDAALRQLRSPRRTQAPSAQECG 212
>gi|118783599|ref|XP_313105.2| AGAP004204-PA [Anopheles gambiae str. PEST]
gi|116128945|gb|EAA08616.2| AGAP004204-PA [Anopheles gambiae str. PEST]
Length = 224
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 118/219 (53%), Positives = 143/219 (65%), Gaps = 10/219 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK++IIG G GKSCLL F + +F+ TIGVEFG+R+V + G+ IKLQIWD
Sbjct: 4 SYDYLFKFLIIGRAGSGKSCLLHHFIENKFKEDSSHTIGVEFGSRIVNVGGKSIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYD T R++FN L +WL DAR A+ N+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDTTSRDSFNVLWNWLNDARTLASQNICILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E FA+EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEEDREVTFLEASNFAQENELIFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG----------YGRGQGPSGARDGTVSQRGGCC 210
SGI+ G GQ P S GG C
Sbjct: 184 GSGIQYGDTSARNAAGTLASGQQPRSRLRPDCSGGGGSC 222
>gi|115653131|ref|XP_791693.2| PREDICTED: ras-related protein Rab-4B-like [Strongylocentrotus
purpuratus]
Length = 210
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 138/187 (73%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK+++IG G GKSC+L QF + +F+ + TIGVEFG++++ G+ +KLQIWD
Sbjct: 4 SYDFLFKFLVIGSAGTGKSCILHQFIESKFKQDSNHTIGVEFGSKIINAGGKSVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L+ WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTKWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN ++FLE SA T +NVEEAF+K A IL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENEMMFLETSALTGENVEEAFLKCARSILNKIELGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|47217171|emb|CAG11007.1| unnamed protein product [Tetraodon nigroviridis]
Length = 209
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWDTA
Sbjct: 2 DFLFKFLVIGNAGTGKSCLLHQFIEKRFKDESNHTIGVEFGSKIISVVSKMVKLQIWDTA 61
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 62 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTTWLSDARMLASQNIVIILCGNKKDL 121
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 122 DADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 181
Query: 184 GIKVG 188
GI+ G
Sbjct: 182 GIQYG 186
>gi|449278080|gb|EMC86047.1| Ras-related protein Rab-4A, partial [Columba livia]
Length = 212
Score = 224 bits (570), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 5 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 65 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 125 DAEREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 184
Query: 184 GIKVG 188
GI+ G
Sbjct: 185 GIQYG 189
>gi|334322160|ref|XP_001379061.2| PREDICTED: ras-related protein Rab-4A-like [Monodelphis domestica]
Length = 233
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 26 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 85
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 86 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 145
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 146 DADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 205
Query: 184 GIKVG 188
GI+ G
Sbjct: 206 GIQYG 210
>gi|301772340|ref|XP_002921593.1| PREDICTED: ras-related protein Rab-4A-like [Ailuropoda melanoleuca]
Length = 304
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/207 (54%), Positives = 145/207 (70%), Gaps = 9/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 97 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 156
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 157 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 216
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 217 DADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 276
Query: 184 GIKVGYG---------RGQGPSGARDG 201
GI+ G R Q PS G
Sbjct: 277 GIQYGDAALRQLRSPRRAQAPSAQECG 303
>gi|345798851|ref|XP_536353.3| PREDICTED: ras-related protein Rab-4A [Canis lupus familiaris]
Length = 218
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/208 (54%), Positives = 145/208 (69%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDT
Sbjct: 10 YYFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK D
Sbjct: 70 AGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 130 LDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMG 189
Query: 183 SGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 190 SGIQYGDAALRQLRSPRRAQAPSAQECG 217
>gi|327262200|ref|XP_003215913.1| PREDICTED: ras-related protein Rab-4A-like [Anolis carolinensis]
Length = 271
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 64 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 123
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 124 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 183
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 184 DGDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 243
Query: 184 GIKVG 188
GI+ G
Sbjct: 244 GIQYG 248
>gi|149033678|gb|EDL88476.1| rCG61209, isoform CRA_b [Rattus norvegicus]
Length = 169
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 109/169 (64%), Positives = 129/169 (76%), Gaps = 5/169 (2%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
MV IDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQ
Sbjct: 1 MVNIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
H++ NM IML+GNK DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA+I TA +
Sbjct: 61 HSSSNMVIMLIGNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKE 120
Query: 167 ILQNIQEGALDAVNDQSGIKVGYGR-----GQGPSGARDGTVSQRGGCC 210
I + IQ+G D N+ +GIK+G + G PS + GCC
Sbjct: 121 IHRKIQQGLFDVHNEANGIKIGPQQSISLVGPCPSQQNSSDIGPDSGCC 169
>gi|395531649|ref|XP_003767887.1| PREDICTED: ras-related protein Rab-4A [Sarcophilus harrisii]
Length = 249
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 42 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 101
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 102 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 161
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 162 DADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 221
Query: 184 GIKVG 188
GI+ G
Sbjct: 222 GIQYG 226
>gi|307777816|dbj|BAJ21304.1| Rab-family small GTPase Rab2E [Tetrahymena thermophila]
Length = 234
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/191 (54%), Positives = 137/191 (71%), Gaps = 1/191 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+IIIG+T VGKSC+L QFT+ RF+ HD TIGVEFG++ + +DG IK+QIWDT
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRFKREHDATIGVEFGSKNIEVDGYTIKIQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+ GALLVYD+T+ ++F L+ W+ D ++AN ++S+ ++GNK D
Sbjct: 64 AGQESFRSITRSYYRGSVGALLVYDVTKEDSFQDLNKWISDVSENANKDLSVAVLGNKID 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R +K +GE FA E LF E SA N+ EAF A +L I E +D +
Sbjct: 124 LDNREVKAK-DGEAFASERNFLFFETSALNGDNIGEAFYALAKHVLDRIIEKQIDLTDQS 182
Query: 183 SGIKVGYGRGQ 193
SG+KVG RG+
Sbjct: 183 SGVKVGAKRGK 193
>gi|66361567|pdb|2BMD|A Chain A, High Resolution Structure Of Gdp-Bound Human Rab4a
gi|66361568|pdb|2BME|A Chain A, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361569|pdb|2BME|B Chain B, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361570|pdb|2BME|C Chain C, High Resolution Structure Of Gppnhp-Bound Human Rab4a
gi|66361571|pdb|2BME|D Chain D, High Resolution Structure Of Gppnhp-Bound Human Rab4a
Length = 186
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 137/176 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 6 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 66 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 126 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELD 181
>gi|114052070|ref|NP_001040209.1| ras-related GTP-binding protein 4b [Bombyx mori]
gi|87248395|gb|ABD36250.1| ras-related GTP-binding protein 4b [Bombyx mori]
Length = 214
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 136/187 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YLFK+++IG G GKS LL F +F+ TIGVEFG+++V I G+ KLQIWD
Sbjct: 4 SYEYLFKFLVIGSAGTGKSSLLNNFIGNKFKEDRCHTIGVEFGSKIVNIGGKSTKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT R++FN L++WL DAR A+PN+ I+LVGNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRDSFNALANWLRDARTLASPNIVILLVGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E QFA EN L+FLE SA+T +NVEEAF+K + IL I+ G LD
Sbjct: 124 DLEDSREVTFTEASQFALENELMFLETSAKTGENVEEAFLKCSKTILAKIETGELDPERI 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>gi|443728401|gb|ELU14757.1| hypothetical protein CAPTEDRAFT_179964 [Capitella teleta]
Length = 166
Score = 223 bits (568), Expect = 4e-56, Method: Compositional matrix adjust.
Identities = 104/142 (73%), Positives = 122/142 (85%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
M+TIDG+ IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQ
Sbjct: 1 MITIDGKQIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
H++ NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +
Sbjct: 61 HSSSNMVIMLIGNKSDLEARRDVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKE 120
Query: 167 ILQNIQEGALDAVNDQSGIKVG 188
I Q IQ+G D N+ +GIK+G
Sbjct: 121 IYQKIQDGVFDINNEANGIKIG 142
>gi|444732045|gb|ELW72369.1| Ras-related protein Rab-4B [Tupaia chinensis]
Length = 351
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 136/184 (73%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTAG
Sbjct: 145 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 204
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 205 QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLD 264
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD SG
Sbjct: 265 PEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSG 324
Query: 185 IKVG 188
I+ G
Sbjct: 325 IQYG 328
>gi|63087689|emb|CAI92126.1| RAB14 protein variant [Mus musculus]
gi|444724049|gb|ELW64671.1| Ras-related protein Rab-14 [Tupaia chinensis]
Length = 197
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 23/210 (10%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIII V C TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIII----VMADC--------------PHTIGVEFGTRIIEVSGQKIKLQIWD 48
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 49 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 108
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 109 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 168
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 169 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 195
>gi|145483649|ref|XP_001427847.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834292|emb|CAI44507.1| rab_C24 [Paramecium tetraurelia]
gi|124394930|emb|CAK60449.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 147/208 (70%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+II+GDT VGKSCLLLQ+ DK+F+ H+ TIGVEFGA+ + I + IK+QIWDT
Sbjct: 5 YNYLFKFIIVGDTSVGKSCLLLQYVDKKFRTDHEATIGVEFGAKQMIIKSKVIKIQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+ GA+LVYD+TRRETF + + W+ + +++ N N+ I+LV NK D
Sbjct: 65 AGQESFRSITRSYYRGSIGAILVYDVTRRETFENATIWVNEIKKYGNDNIVIILVANKTD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+ R VS++E ++ AK+NGL ++E A+ V+EAF KI + I+ +D N++
Sbjct: 125 LSDIRKVSEDEAKEMAKQNGLEYIEVCAKQNYKVDEAFQIITEKIYKKIELNQIDLSNEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G+K+G +G + ++ CC
Sbjct: 185 CGVKLG-SKGSFIEDNQQEEKKRQSLCC 211
>gi|354468869|ref|XP_003496873.1| PREDICTED: ras-related protein Rab-4A-like [Cricetulus griseus]
Length = 218
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/185 (58%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 11 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 70
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 71 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 130
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 131 DADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERMGS 190
Query: 184 GIKVG 188
GI+ G
Sbjct: 191 GIQYG 195
>gi|74833863|emb|CAI39385.1| rab_B70 [Paramecium tetraurelia]
Length = 211
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 100/189 (52%), Positives = 147/189 (77%), Gaps = 2/189 (1%)
Query: 2 SYDYLFKYIIIGDT--GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQI 59
SY YLFK+IIIGD+ GVGKSCLLLQF D++F+ HD TIGVEFG++ + I + IKLQI
Sbjct: 3 SYAYLFKFIIIGDSKLGVGKSCLLLQFLDRKFKLDHDTTIGVEFGSKTLNIRQKNIKLQI 62
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAGQESF+SITRSYYRG+ AL+VYD+T R++F +++ W+E+ + +AN ++++LV N
Sbjct: 63 WDTAGQESFKSITRSYYRGSICALIVYDVTSRDSFENITRWMEETKSYANDKITLVLVAN 122
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
K DL+ +R +S EEG+ FAK++ L+F+EASA+T V++ F + A +L+ I++ +DA
Sbjct: 123 KTDLSDKRVISAEEGQTFAKKHDLIFVEASAKTGFQVDKIFQEAAEAVLKKIEQRDIDAT 182
Query: 180 NDQSGIKVG 188
N+ G+++G
Sbjct: 183 NESIGVRIG 191
>gi|33150586|gb|AAP97171.1|AF087861_1 rab4b [Homo sapiens]
Length = 213
Score = 223 bits (567), Expect = 5e-56, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 136/184 (73%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTAG
Sbjct: 7 FLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTAG 66
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 67 QERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDLD 126
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD SG
Sbjct: 127 PEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERMGSG 186
Query: 185 IKVG 188
I+ G
Sbjct: 187 IQYG 190
>gi|389614625|dbj|BAM20348.1| ras-related protein Rab-14, partial [Papilio polytes]
Length = 162
Score = 223 bits (567), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 104/155 (67%), Positives = 124/155 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVAGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNV 156
DL +R V+ EE +QFA ENGL+F+EASA+T QNV
Sbjct: 127 DLDGQRDVTYEEAKQFADENGLMFVEASAKTGQNV 161
>gi|225710156|gb|ACO10924.1| Ras-related protein Rab-4B [Caligus rogercresseyi]
Length = 219
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+++IG G GKSCLLLQF + R+ TIGVEFG++++ + G+ +KLQIWDT
Sbjct: 6 YDYLFKFLVIGSAGTGKSCLLLQFIEGRYLDKCRHTIGVEFGSKVLPVGGKTVKLQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYDI RE+FN L++WL DAR A+P + I+LVGNK D
Sbjct: 66 AGQERFRSVTRSYYRGAAGALLVYDIASRESFNALTNWLTDARNLASPQIIILLVGNKKD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R VS E +FA+EN L+FLE SA+T + VEEAF+K + IL I+ G LD
Sbjct: 126 LEDSREVSFLEASRFAQENDLIFLETSAKTGEAVEEAFLKCSKSILAKIETGELDPERIG 185
Query: 183 SGIKVG 188
SGI G
Sbjct: 186 SGIHYG 191
>gi|225711860|gb|ACO11776.1| Ras-related protein Rab-4B [Lepeophtheirus salmonis]
Length = 217
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 136/186 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+++IG G GKSCLL QF + R+ TIGVEFG+R++ + G+ +KLQIWDT
Sbjct: 5 YDYLFKFLVIGSAGTGKSCLLHQFIEGRYLDDSRHTIGVEFGSRVLPVGGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYDI RE+FN L++WL DAR A+P + I+LVGNK D
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDIASRESFNALTNWLTDARTLASPQIIILLVGNKKD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R VS E +FA+EN L+FLE SA+T + VEEAF+K + IL I+ G LD
Sbjct: 125 LESEREVSFLEASRFAQENDLIFLETSAKTGEAVEEAFLKCSKSILAKIETGELDPERIG 184
Query: 183 SGIKVG 188
SGI+ G
Sbjct: 185 SGIQYG 190
>gi|74211389|dbj|BAE26447.1| unnamed protein product [Mus musculus]
Length = 218
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 146/209 (69%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQ FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK
Sbjct: 69 TAGQGRFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>gi|344273111|ref|XP_003408370.1| PREDICTED: ras-related protein Rab-2A-like [Loxodonta africana]
Length = 188
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 110/175 (62%), Positives = 129/175 (73%), Gaps = 24/175 (13%)
Query: 14 DTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITR 73
++GV GARM+TIDG+ IKLQIWDTAGQESFRSITR
Sbjct: 14 NSGVEF------------------------GARMITIDGKQIKLQIWDTAGQESFRSITR 49
Query: 74 SYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEE 133
SYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK DL RR V KEE
Sbjct: 50 SYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNKSDLESRREVKKEE 109
Query: 134 GEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVG 188
GE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N+ +GIK+G
Sbjct: 110 GEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINNEANGIKIG 164
>gi|86438641|emb|CAJ26361.1| rab2-like protein [Brachypodium sylvaticum]
Length = 150
Score = 222 bits (566), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 108/140 (77%), Positives = 119/140 (85%), Gaps = 3/140 (2%)
Query: 23 LLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGA 82
+LQFTDKRFQPVHDLTIGVEFG+RMVTID R IKL IWDTAGQE+FRSITRSYYRGAA A
Sbjct: 1 MLQFTDKRFQPVHDLTIGVEFGSRMVTIDNRKIKLHIWDTAGQEAFRSITRSYYRGAAAA 60
Query: 83 LLVYDIT-RRETFNHLSSWLEDARQHA--NPNMSIMLVGNKCDLAHRRAVSKEEGEQFAK 139
LLVYDIT RRETF+HL+SWLE+ RQ A N N++I+LVGNK DL RR VS EEGEQFA
Sbjct: 61 LLVYDITSRRETFSHLTSWLEEMRQLADGNNNITIVLVGNKLDLEQRRVVSTEEGEQFAN 120
Query: 140 ENGLLFLEASARTAQNVEEA 159
ENGL F+E SART NV+E
Sbjct: 121 ENGLAFIETSARTRHNVDEV 140
>gi|63087697|emb|CAI92130.1| RAB14 protein variant [Mus musculus]
Length = 197
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 116/210 (55%), Positives = 143/210 (68%), Gaps = 23/210 (10%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIII V C TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIII----VMADC--------------PHTIGVEFGTRIIEVSGQKIKLQIWD 48
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 49 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 108
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 109 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLDAA 168
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 169 ESGVQ---HKPSAPQGGRLISEPQPQREGC 195
>gi|291413362|ref|XP_002722943.1| PREDICTED: RAB4A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 235
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 112/207 (54%), Positives = 145/207 (70%), Gaps = 9/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 28 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 87
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ ++ I+L GNK DL
Sbjct: 88 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQSIVIILCGNKRDL 147
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 148 DAEREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 207
Query: 184 GIKVGYG---------RGQGPSGARDG 201
GI+ G R Q PS G
Sbjct: 208 GIQYGDAALRQLRSPRRAQAPSAQECG 234
>gi|344286688|ref|XP_003415089.1| PREDICTED: ras-related protein Rab-4A-like [Loxodonta africana]
Length = 249
Score = 222 bits (565), Expect = 8e-56, Method: Compositional matrix adjust.
Identities = 107/185 (57%), Positives = 140/185 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 42 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 101
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK DL
Sbjct: 102 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVVILCGNKKDL 161
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD S
Sbjct: 162 DVDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGS 221
Query: 184 GIKVG 188
GI+ G
Sbjct: 222 GIQYG 226
>gi|66823707|ref|XP_645208.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|122057917|sp|Q559X6.1|RAB2B_DICDI RecName: Full=Ras-related protein Rab-2B
gi|60473275|gb|EAL71221.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 135/171 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY++LFKYI++GD+ VGKS LLLQF DKRF P D TIGVEFG+R + I+ + IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRSITR+YYRGA A++VYDITRR++F L+SWL D R+ ++ +++ +L+GNK
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKA 139
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 172
DL R VS E ++FA++NGL+F E SA+TA NV+EAF K+ +IL+ ++
Sbjct: 140 DLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLE 190
>gi|351704238|gb|EHB07157.1| Ras-related protein Rab-2A [Heterocephalus glaber]
Length = 206
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/148 (71%), Positives = 124/148 (83%), Gaps = 1/148 (0%)
Query: 41 VEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSW 100
VEFGA+M+TIDG+ IKLQIWDTAGQESFRS+TRSYYRGAAGALLVYDITRR+ FN L++W
Sbjct: 6 VEFGAQMITIDGKHIKLQIWDTAGQESFRSVTRSYYRGAAGALLVYDITRRDPFNLLTTW 65
Query: 101 LEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 160
LEDARQH+N NM IML+GNK DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAF
Sbjct: 66 LEDARQHSNSNMVIMLIGNKSDLESRREVKKEEGEAFAREHGLIFVETSAKTASNVEEAF 125
Query: 161 IKTAAKILQNIQEGALDAVNDQSGIKVG 188
I TA +I IQ G D N+ +GIK+G
Sbjct: 126 INTAKEIYGKIQ-GVFDINNEANGIKIG 152
>gi|355559189|gb|EHH15969.1| hypothetical protein EGK_02156, partial [Macaca mulatta]
Length = 209
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/186 (58%), Positives = 141/186 (75%), Gaps = 1/186 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 120
Query: 124 AHRRAVSKEEGEQFAKENG-LLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
R V+ E +FA+ENG L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 121 DADREVTFLEASRFAQENGKLMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMG 180
Query: 183 SGIKVG 188
SGI+ G
Sbjct: 181 SGIQYG 186
>gi|122921420|pdb|2O52|A Chain A, Crystal Structure Of Human Rab4b In Complex With Gdp
gi|122921421|pdb|2O52|B Chain B, Crystal Structure Of Human Rab4b In Complex With Gdp
Length = 200
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 105/174 (60%), Positives = 132/174 (75%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTA
Sbjct: 23 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 82
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK DL
Sbjct: 83 GQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKKDL 142
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 143 DPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELD 196
>gi|47223593|emb|CAF99202.1| unnamed protein product [Tetraodon nigroviridis]
Length = 276
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 126/271 (46%), Positives = 156/271 (57%), Gaps = 66/271 (24%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGL----------------------LFLEA----------- 148
DL +R V+ EE +QFA+ENG +FLEA
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGESEPEPRRGQKRLVLMVVFERFGVFLEADVCFVPQVCCF 186
Query: 149 -----------SARTA-----------------QNVEEAFIKTAAKILQNIQEGALDAVN 180
+ RT +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 187 SKPVRKRKCVTACRTPGLSDAPELTVSPLAFRGENVEDAFLEAAKKIYQNIQDGSLDLNA 246
Query: 181 DQSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 247 AESGVQ---HKPSAPQGGRLTSEPQPQREGC 274
>gi|57010|emb|CAA30006.1| unnamed protein product [Rattus sp.]
Length = 213
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 112/209 (53%), Positives = 144/209 (68%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG +++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGQKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+T SYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTTSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE S T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSPLTGENVEEAFMQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 184 GSGIQYGDAALRQLRSPRRTQAPSAQECG 212
>gi|326915557|ref|XP_003204082.1| PREDICTED: ras-related protein Rab-4A-like, partial [Meleagris
gallopavo]
Length = 207
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 139/184 (75%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTAG
Sbjct: 1 FLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAG 60
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 61 QERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLD 120
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD SG
Sbjct: 121 ADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSG 180
Query: 185 IKVG 188
I+ G
Sbjct: 181 IQYG 184
>gi|449678450|ref|XP_002162946.2| PREDICTED: ras-related protein Rab-14-like [Hydra magnipapillata]
Length = 216
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 141/208 (67%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R+V + + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIVEVASQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+++GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIIMIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL + + + FA +N L + + NVE+AF++TA KI Q+IQ+G+LD
Sbjct: 127 DLEAQVNYFYKIEKTFAYKNHTLQCDKAWERGDNVEDAFLETAKKIFQSIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
+SG++ + GPS + C
Sbjct: 187 ESGVQHKPPKKGGPSPFPQENPQNKDAC 214
>gi|260831472|ref|XP_002610683.1| hypothetical protein BRAFLDRAFT_202673 [Branchiostoma floridae]
gi|229296050|gb|EEN66693.1| hypothetical protein BRAFLDRAFT_202673 [Branchiostoma floridae]
Length = 207
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 106/185 (57%), Positives = 137/185 (74%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSC+L QF + +F+ TIGVEFG+++V + G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGAAGTGKSCILHQFIESKFKQDSSHTIGVEFGSKVVNVGGKSVKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK DL
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDITSRETYNQLTNWLTDARTLASPNIVIILCGNKKDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ E +FA+EN ++FLE SA T +NVEEAF+K + IL I+ G LD S
Sbjct: 121 DADREVTFLEASRFAQENEIMFLETSALTGENVEEAFLKCSRSILTKIESGELDPDRMGS 180
Query: 184 GIKVG 188
GI+ G
Sbjct: 181 GIQYG 185
>gi|209876790|ref|XP_002139837.1| hypothetical protein [Cryptosporidium muris RN66]
gi|209555443|gb|EEA05488.1| hypothetical protein, conserved [Cryptosporidium muris RN66]
Length = 216
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/208 (52%), Positives = 142/208 (68%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+IIIGD G GKSCLL QF + +F+ TIGVEFG++++T G+ +KLQIWDT
Sbjct: 9 YDYLFKFIIIGDAGAGKSCLLHQFIENKFKKGSSHTIGVEFGSKIITTGGKRVKLQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +RS+TRSYYRGAAGAL+VYDIT RET+NHL +WL DAR A ++SI+ VGNK D
Sbjct: 69 AGQERYRSVTRSYYRGAAGALIVYDITNRETYNHLVNWLADARTLARVDISIIGVGNKVD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD-AVND 181
L +R V+ E + A+EN +LFLE SA T + VEE F+K IL I++G +D +
Sbjct: 129 LKDKRQVTFLEASRCAQENDILFLETSALTGEGVEEVFVKVTRLILSKIEDGTIDPSTMT 188
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
SGI+ S D T + + C
Sbjct: 189 SSGIQSSTRSQLNASSNNDNTKTSKCLC 216
>gi|320168147|gb|EFW45046.1| small GTP-binding protein Rab4 [Capsaspora owczarzaki ATCC 30864]
Length = 221
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/202 (53%), Positives = 144/202 (71%), Gaps = 1/202 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+++IG+ GVGKSC+L F + +F+ TIGVEFG+++ + G+ +KLQIWDT
Sbjct: 5 YDYLFKFLVIGNAGVGKSCVLHSFLEGKFKQESSHTIGVEFGSKIAKLGGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGALLVYDIT RE++N L++WL DAR A+P++ I+LVGNK D
Sbjct: 65 AGQERFRSVTRSYYRGAAGALLVYDITNRESYNALANWLTDARTLASPDIVIILVGNKKD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R V+ E +FA+EN +LFLE SA T +NV+E F+K IL I+ G LD
Sbjct: 125 LEDDREVTFLEASRFAQENDILFLETSALTGENVDEVFMKCGRNILSKIESGELDPEKMG 184
Query: 183 SGIKVGYGRG-QGPSGARDGTV 203
SGI+ G + + P G + TV
Sbjct: 185 SGIQYGDNKNVKAPLGNAERTV 206
>gi|339522177|gb|AEJ84253.1| Ras-related protein Rab-4A [Capra hircus]
Length = 213
Score = 220 bits (560), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 110/209 (52%), Positives = 145/209 (69%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+ RSYYRGAAGALLVYDIT +ET+N L++WL DAR + N+ I+L GNK
Sbjct: 64 TAGQERFRSVRRSYYRGAAGALLVYDITSQETYNALTNWLTDARMLGSQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERV 183
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
+GI+ G R Q PS G
Sbjct: 184 GAGIQYGDAALRQLRSPRRAQAPSAQECG 212
>gi|242021638|ref|XP_002431251.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516505|gb|EEB18513.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 211
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/209 (51%), Positives = 144/209 (68%), Gaps = 2/209 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M DYLFK+++IG G GKSCLL QF +F+ TIGVEFG+++V + G+ +KLQIW
Sbjct: 1 MFLDYLFKFLVIGSAGCGKSCLLYQFIRNQFKEDSSYTIGVEFGSKIVNVGGKSVKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+T+ YYRGAAGALLVYDIT R++FN LS+WL D + A+PN+ ++LVGNK
Sbjct: 61 DTAGQERFRSVTKGYYRGAAGALLVYDITSRDSFNALSTWLSDTKTLASPNIVMLLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R V+ E +FA+EN L+FLE SA++ + VEEAF+K + IL I+ G L+
Sbjct: 121 KDLEKEREVTFLEASKFAQENELMFLETSAKSGECVEEAFLKCSKSILAKIEAGELEP-- 178
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGC 209
D+ G + YG + RDG ++ C
Sbjct: 179 DRLGSGIQYGDSKLKYLHRDGQSGRQSDC 207
>gi|348671985|gb|EGZ11805.1| hypothetical protein PHYSODRAFT_355097 [Phytophthora sojae]
Length = 207
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 105/167 (62%), Positives = 133/167 (79%), Gaps = 2/167 (1%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQE 66
KYIIIGD+ VGKS LLLQFT++ FQP+HDLTIGVEFGA+++ +DGR +KL+IWDTAGQE
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHFQPIHDLTIGVEFGAKLLEVDGRKVKLEIWDTAGQE 65
Query: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHA-NPNMSIMLVGNKCDLAH 125
+F SITRSYYRGA GALLVYD++RRE+F HL WL++ Q+ N + IM+VG KCD+
Sbjct: 66 TFLSITRSYYRGADGALLVYDVSRRESFEHLGRWLQECHQNCHNDEVEIMVVGMKCDVDE 125
Query: 126 R-RAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI 171
R R VS++EG +A +GL F+EASA+TA NVE+AF TA IL+N
Sbjct: 126 RQREVSEDEGRNWAAAHGLYFIEASAKTALNVEQAFALTATTILRNF 172
>gi|63087693|emb|CAI92128.1| RAB14 protein variant [Mus musculus]
Length = 197
Score = 219 bits (558), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 115/210 (54%), Positives = 142/210 (67%), Gaps = 23/210 (10%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIII V C TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIII----VMADC--------------PHTIGVEFGTRIIEVSGQKIKLQIWD 48
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQ FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 49 TAGQGRFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 108
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 109 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 168
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 169 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 195
>gi|355746311|gb|EHH50936.1| hypothetical protein EGM_01844, partial [Macaca fascicularis]
Length = 209
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 108/186 (58%), Positives = 140/186 (75%), Gaps = 1/186 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++W DAR A+ N+ I+L GNK DL
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWSTDARMLASQNIVIILCGNKKDL 120
Query: 124 AHRRAVSKEEGEQFAKENG-LLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
R V+ E +FA+ENG L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 121 DADREVTFLEASRFAQENGKLMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMG 180
Query: 183 SGIKVG 188
SGI+ G
Sbjct: 181 SGIQYG 186
>gi|296422345|ref|XP_002840721.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636944|emb|CAZ84912.1| unnamed protein product [Tuber melanosporum]
Length = 215
Score = 218 bits (556), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 146/214 (68%), Gaps = 9/214 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP----IKLQ 58
+DY+ K + IGD+G GKS L ++ + RF P HD+TIGVEFG+R++ +D P IKLQ
Sbjct: 5 WDYIAKVVNIGDSGCGKSSLTIRLCEGRFNPTHDVTIGVEFGSRIIPVDTSPTAQKIKLQ 64
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
IWDTAGQESFR+IT+SY+RGA GALLVYDI+RR TF H + WLE+ R A+ N+SI+LVG
Sbjct: 65 IWDTAGQESFRAITKSYFRGATGALLVYDISRRATFTHATEWLEELRGAADANISIILVG 124
Query: 119 NKCDLAH-RRAVSKEEGEQFAKENGL-LFLEASARTAQNVEEAFIKTAAKILQNIQEGAL 176
NKCDL + +R V EE +A+ NG+ F+E SA+T + VEEAF+ A +I +NI+ G
Sbjct: 125 NKCDLGNDKREVPIEEARAWAEGNGIKAFVETSAKTGEGVEEAFVDCAREIYRNIKSGVY 184
Query: 177 DAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
D + GIK + S + D RGGCC
Sbjct: 185 DLNDKSHGIKTNTAK---TSLSMDEQTKVRGGCC 215
>gi|17559534|ref|NP_507083.1| Protein F11A5.3 [Caenorhabditis elegans]
gi|3875760|emb|CAB07356.1| Protein F11A5.3 [Caenorhabditis elegans]
Length = 201
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 103/188 (54%), Positives = 138/188 (73%), Gaps = 1/188 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M D++FKY+IIGD GVGKS LLL+FTD+ F P+H T+GVEFG + + ID ++L++W
Sbjct: 1 MYPDHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DT GQE+FRSI R+YYR A GALLVYDIT R++F HL WL D RQH +P M IML+GNK
Sbjct: 61 DTCGQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R V+ EEGE FAK+NGL F+E SA+ ++VE+AF+ TA +I + ++ G ++ +
Sbjct: 121 SDLKAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYKKLKLGVIED-D 179
Query: 181 DQSGIKVG 188
D K+G
Sbjct: 180 DVKKKKIG 187
>gi|198422724|ref|XP_002122160.1| PREDICTED: similar to Ras-related protein Rab-4B [Ciona
intestinalis]
Length = 217
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 105/186 (56%), Positives = 134/186 (72%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK+++IG GVGKSC+L Q + +F TIGVEFG+R+ + G+ IKLQIWDT
Sbjct: 5 YDFLFKFLVIGSAGVGKSCVLHQLLNNKFNDDSTHTIGVEFGSRICNVGGKSIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FRS+TRSYYRGAAGA+L YDITRR+TFN L+ WL DA+ A+PN+ I+L GNK D
Sbjct: 65 AGQERFRSVTRSYYRGAAGAILCYDITRRDTFNSLTDWLTDAKTLASPNIVIVLCGNKKD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R V+ E +FA+EN +LFLE SA T +NVE++F K A IL I+ G +D
Sbjct: 125 LEAEREVTFLEASRFAQENEILFLETSAVTGENVEDSFNKCAKSILTRIEAGEIDPERMG 184
Query: 183 SGIKVG 188
SGI+ G
Sbjct: 185 SGIQYG 190
>gi|399163179|gb|AFP33165.1| rab family member, partial [Caenorhabditis elegans]
Length = 200
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 102/185 (55%), Positives = 137/185 (74%), Gaps = 1/185 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D++FKY+IIGD GVGKS LLL+FTD+ F P+H T+GVEFG + + ID ++L++WDT
Sbjct: 3 DHMFKYVIIGDGGVGKSNLLLRFTDELFDPIHTTTLGVEFGYKDLQIDKYKVRLRVWDTC 62
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE+FRSI R+YYR A GALLVYDIT R++F HL WL D RQH +P M IML+GNK DL
Sbjct: 63 GQENFRSIIRAYYRNALGALLVYDITCRKSFVHLEQWLSDLRQHGHPEMVIMLIGNKSDL 122
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
R V+ EEGE FAK+NGL F+E SA+ ++VE+AF+ TA +I + ++ G ++ +D
Sbjct: 123 KAVRDVTTEEGEAFAKKNGLTFMETSAKANKHVEKAFVNTAHEIYKKLKLGVIED-DDVK 181
Query: 184 GIKVG 188
K+G
Sbjct: 182 KKKIG 186
>gi|225717876|gb|ACO14784.1| Ras-related protein Rab-4B [Caligus clemensi]
Length = 220
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 108/187 (57%), Positives = 134/187 (71%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK+++IG G GKSCLL QF + R+ TIGVEFG+R++ + G+ +KLQIWD
Sbjct: 5 SYDYLFKFLVIGSAGTGKSCLLHQFIEGRYLDECRHTIGVEFGSRVLPVGGKTVKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDI RE+FN L++WL DAR A+P + I+LVGNK
Sbjct: 65 TAGQERFRSVTRSYYRGAAGALLVYDIASRESFNALTNWLTDARNLASPQIIILLVGNKK 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
L R VS E +FA+ N L+FLE SA+T + VEEAF+K + IL I+ G LD
Sbjct: 125 GLETTREVSFLEASRFAQANDLIFLETSAKTGEAVEEAFLKCSKSILAKIETGELDPERI 184
Query: 182 QSGIKVG 188
SGI G
Sbjct: 185 GSGIHYG 191
>gi|145479485|ref|XP_001425765.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392837|emb|CAK58367.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 216 bits (551), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 138/187 (73%), Gaps = 1/187 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y +FKYIIIGDTGVGKSC++LQ + + + HD TIGVEFGA+++ ++ IKLQIWD
Sbjct: 3 NYSLMFKYIIIGDTGVGKSCIVLQLIENQIRQEHDATIGVEFGAKIIKVNSMNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSI RSYYR A GALLVYDIT+R++F++L W+E+ + + N NM I L GNK
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITKRDSFHNLQRWMEEIKNNGNANMVITLCGNKV 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RAV+ EEG QFA+++ L+FLE SA+ NV+ AF ++ +IL I +G++ +
Sbjct: 123 DLESERAVTYEEGWQFAQQHQLIFLETSAKQGINVQSAFYQSTQRILNEIDDGSI-VLGQ 181
Query: 182 QSGIKVG 188
GIK+G
Sbjct: 182 DPGIKIG 188
>gi|154332368|ref|XP_001562558.1| putative ras-related protein rab-14 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134059448|emb|CAM41674.1| putative ras-related protein rab-14 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 225
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 135/187 (72%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD VGKSCL+ FT++R++ TIGV+FG ++ I+G +KLQ+W
Sbjct: 1 MSHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLLHTIGVDFGTTVIDINGELVKLQMW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYDI+RR T+ H+ +WL DAR + P +LVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDISRRSTYAHIGTWLTDARLNTGPETVFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R VS EE QFA E+ LLF+E S+ NVEE F+ TA +I + ++ G + V+
Sbjct: 121 SDLEEQREVSYEEAAQFAAEHNLLFVECSSLNGNNVEEVFLSTARRIHEKVKSGVMSPVD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|13785146|emb|CAA72626.2| rab4A-like protein [Trichinella pseudospiralis]
Length = 213
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 137/188 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YLFKY+IIG++G GKSC+L QF + +F+ TIG+EFG+++V I R IKLQ+WD
Sbjct: 4 TYSYLFKYLIIGNSGTGKSCVLHQFLENKFKQDTAHTIGIEFGSKVVKIQDRSIKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+T++YY GAA ALLVYDIT R++FN ++ WL DAR A+P + ++L+GNK
Sbjct: 64 TAGQERFRSLTKNYYNGAACALLVYDITCRQSFNAIAQWLSDARSLASPQIIVILIGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RR V+ E QFA+ENG+LFLE SA T +N+EE F++ A IL I+ G LD
Sbjct: 124 DLEDRREVTFMEASQFAQENGMLFLETSALTGENIEETFLRCARSILTKIESGELDPNRV 183
Query: 182 QSGIKVGY 189
GI+ G+
Sbjct: 184 GYGIQFGH 191
>gi|224587158|gb|ACN58615.1| Ras-related protein Rab-14 [Salmo salar]
Length = 182
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/172 (61%), Positives = 130/172 (75%)
Query: 38 TIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL 97
TIGVEFG R++ + G+ IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL
Sbjct: 9 TIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 68
Query: 98 SSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVE 157
SSWL DAR NPN I+L+GNK DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE
Sbjct: 69 SSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE 128
Query: 158 EAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGC 209
+AF++ A KI QNIQ+G+LD +SG++ QG + QR GC
Sbjct: 129 DAFLEAAKKIYQNIQDGSLDLNAAESGVQHKPSAPQGGRLLTNEPQPQREGC 180
>gi|196012040|ref|XP_002115883.1| hypothetical protein TRIADDRAFT_59761 [Trichoplax adhaerens]
gi|190581659|gb|EDV21735.1| hypothetical protein TRIADDRAFT_59761 [Trichoplax adhaerens]
Length = 214
Score = 216 bits (550), Expect = 5e-54, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 142/208 (68%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+L K++IIG G GKSCLL QF + +F+ TIGVEFG++++ + +KLQIWD
Sbjct: 5 SYDFLLKFLIIGSAGTGKSCLLHQFIENKFKQDSSHTIGVEFGSKVINCSNKTVKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+T+SYYRGAAGALLVYDI+ R+++N L +WL DAR A+P + I+L+GNK
Sbjct: 65 TAGQERFRSVTKSYYRGAAGALLVYDISNRDSYNALGAWLTDARTLASPQIVIILIGNKK 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA + +NVEEAF++ + IL I+ G L+
Sbjct: 125 DLESEREVTFLEASRFAQENELMFLETSALSGENVEEAFLRCSKNILTRIESGELNPDRV 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGC 209
SGI+ G G + S + S G C
Sbjct: 185 GSGIQYGDGTIRKLSSNKPEVSSSDGNC 212
>gi|124087881|ref|XP_001346913.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia strain
d4-2]
gi|145474789|ref|XP_001423417.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|50057302|emb|CAH03286.1| GTP-binding protein RAB2 homolog [Paramecium tetraurelia]
gi|74834222|emb|CAI44486.1| rab_C66 [Paramecium tetraurelia]
gi|124390477|emb|CAK56019.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 216 bits (549), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 103/197 (52%), Positives = 138/197 (70%), Gaps = 4/197 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+II+GDT VGKSCLLLQFTD RF+ HD TIGVEFG+R + I+ + IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINEKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYYRG+ G +LV+D+T RE+F+++ W + + +A + +++VGNK D
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVTNRESFDNVQKWHTEIQGYACDKIEMVIVGNKID 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V EEG +FA+++G + E SA+T +NV+ F A K+L I G LD +
Sbjct: 124 LEDRREVKTEEGRKFAQKHGFDYFETSAKTGENVDAVFESMATKVLAKIGSGDLDPSQEI 183
Query: 183 SGIKVG----YGRGQGP 195
GIK G Y + P
Sbjct: 184 YGIKTGSIGIYSKPANP 200
>gi|281337710|gb|EFB13294.1| hypothetical protein PANDA_004041 [Ailuropoda melanoleuca]
Length = 179
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 106/174 (60%), Positives = 131/174 (75%), Gaps = 5/174 (2%)
Query: 38 TIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL 97
TIGVEFG R++ + G+ IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL
Sbjct: 7 TIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 66
Query: 98 SSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVE 157
SSWL DAR NPN I+L+GNK DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE
Sbjct: 67 SSWLTDARNLTNPNTVIILIGNKADLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVE 126
Query: 158 EAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+AF++ A KI QNIQ+G+LD +SG++ + P G R QR GC
Sbjct: 127 DAFLEAAKKIYQNIQDGSLDLNAAESGVQ---HKPSAPQGGRLTSEPQPQREGC 177
>gi|146181225|ref|XP_001022351.2| Ras family protein [Tetrahymena thermophila]
gi|146144246|gb|EAS02106.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777818|dbj|BAJ21305.1| Rab-family small GTPase Rab2F [Tetrahymena thermophila]
Length = 235
Score = 215 bits (548), Expect = 8e-54, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 137/186 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+I+IGDTGVGKSC+LL+F D RF+ +D TIGVEFG++++ + IK+QIWDT
Sbjct: 4 YDYLFKFIMIGDTGVGKSCMLLRFVDDRFREDYDATIGVEFGSKIIDVANLAIKIQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYY+GA GA++V+DIT+R +F++L WL D ++ +++VGNK D
Sbjct: 64 AGQESFRSITRSYYKGAIGAVVVFDITKRSSFDNLPKWLHDIKEQGKEETFVLIVGNKFD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+R VS++E +FA++ G ++E SA++ NV + F A +IL IQ+ +D N+
Sbjct: 124 QMLQREVSQQEASEFAEQQGFNYVEVSAKSGDNVNKIFNIMAQEILSKIQQNLIDFTNES 183
Query: 183 SGIKVG 188
SGIKVG
Sbjct: 184 SGIKVG 189
>gi|145487073|ref|XP_001429542.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831315|emb|CAI39281.1| rab_B69 [Paramecium tetraurelia]
gi|124396635|emb|CAK62144.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 134/186 (72%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+II+GDT VGKSCLLLQFTD RF+ HD TIGVEFG+R + I+ + IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYYRG+ G +LV+D+T R++F L W ++ + +A + +++VGNK D
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKID 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V EE ++A++ G + E SA+T +NV+ F A ++L+ I G +D +
Sbjct: 124 LEERREVKTEEARRYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKIDSGEIDPTQEV 183
Query: 183 SGIKVG 188
GIK+G
Sbjct: 184 YGIKIG 189
>gi|145504759|ref|XP_001438346.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834286|emb|CAI44505.1| rab_A69 [Paramecium tetraurelia]
gi|124405518|emb|CAK70949.1| unnamed protein product [Paramecium tetraurelia]
Length = 226
Score = 215 bits (548), Expect = 9e-54, Method: Compositional matrix adjust.
Identities = 97/186 (52%), Positives = 134/186 (72%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+II+GDT VGKSCLLLQFTD RF+ HD TIGVEFG+R + I+ + IKLQIWDT
Sbjct: 4 YNYLFKFIIVGDTNVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNLKINDKQIKLQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYYRG+ G +LV+D+T R++F L W ++ + +A + +++VGNK D
Sbjct: 64 AGQESFKSITRSYYRGSIGGILVFDVTSRQSFEDLQKWYQEIQGYACDKIEMVIVGNKID 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR V EE ++A++ G + E SA+T +NV+ F A ++L+ I G +D +
Sbjct: 124 LEDRREVQTEEARKYAQKQGFAYFETSAKTGENVDNVFETMANQVLKKIDSGEIDPTQEV 183
Query: 183 SGIKVG 188
GIK+G
Sbjct: 184 YGIKIG 189
>gi|157135160|ref|XP_001656550.1| ras-related protein Rab, putative [Aedes aegypti]
Length = 157
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 118/151 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASART 152
DL R V+ EE ++FA ENGL+F EASA T
Sbjct: 127 DLESTREVTYEEAKKFADENGLMFAEASAMT 157
>gi|224047814|ref|XP_002191089.1| PREDICTED: ras-related protein Rab-4A [Taeniopygia guttata]
Length = 246
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/181 (58%), Positives = 136/181 (75%)
Query: 8 KYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQES 67
K+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTAGQE
Sbjct: 43 KFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTAGQER 102
Query: 68 FRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRR 127
FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL R
Sbjct: 103 FRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDLDADR 162
Query: 128 AVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKV 187
V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD SGI+
Sbjct: 163 EVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERMGSGIQY 222
Query: 188 G 188
G
Sbjct: 223 G 223
>gi|157135156|ref|XP_001656548.1| ras-related protein Rab, putative [Aedes aegypti]
gi|108870278|gb|EAT34503.1| AAEL013252-PA [Aedes aegypti]
Length = 160
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 100/151 (66%), Positives = 118/151 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ +D + IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMASCPHTIGVEFGTRIIEVDKQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL D R NP+ I L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDTRNLTNPSTVIFLIGNKS 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASART 152
DL R V+ EE ++FA ENGL+F EASA T
Sbjct: 127 DLESTREVTYEEAKKFADENGLMFAEASAMT 157
>gi|118379514|ref|XP_001022923.1| Ras-related protein Rab-2A, putative [Tetrahymena thermophila]
gi|89304690|gb|EAS02678.1| Ras-related protein Rab-2A, putative [Tetrahymena thermophila
SB210]
Length = 244
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/201 (51%), Positives = 137/201 (68%), Gaps = 11/201 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK+IIIG+T VGKSC+L QFT+ RF+ HD TIGVEFG++ + +DG IK+QIWDT
Sbjct: 4 YDYLFKFIIIGNTSVGKSCILSQFTENRFKREHDATIGVEFGSKNIEVDGYTIKIQIWDT 63
Query: 63 AGQESFRSITRSYYRG----------AAGALLVYDITRRETFNHLSSWLEDARQHANPNM 112
AGQESFRSITRSYYRG + GALLVYD+T+ ++F L+ W+ D ++AN ++
Sbjct: 64 AGQESFRSITRSYYRGIKLMKFPQNRSVGALLVYDVTKEDSFQDLNKWISDVSENANKDL 123
Query: 113 SIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 172
S+ ++GNK DL +R +K +GE FA E LF E SA N+ EAF A +L I
Sbjct: 124 SVAVLGNKIDLDNREVKAK-DGEAFASERNFLFFETSALNGDNIGEAFYALAKHVLDRII 182
Query: 173 EGALDAVNDQSGIKVGYGRGQ 193
E +D + SG+KVG RG+
Sbjct: 183 EKQIDLTDQSSGVKVGAKRGK 203
>gi|349802665|gb|AEQ16805.1| putative member ras oncogene family [Pipa carvalhoi]
Length = 112
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 98/112 (87%), Positives = 105/112 (93%)
Query: 15 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRS 74
TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIWDTAGQESFRSITRS
Sbjct: 1 TGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIWDTAGQESFRSITRS 60
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHR 126
YYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+ NK DL R
Sbjct: 61 YYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIANKSDLESR 112
>gi|145539578|ref|XP_001455479.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423287|emb|CAK88082.1| unnamed protein product [Paramecium tetraurelia]
Length = 223
Score = 214 bits (545), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 136/187 (72%), Gaps = 1/187 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y + KYIIIGDTGVGKSC++LQ + + + HD TIGVEFGA+++ ++ IKLQIWD
Sbjct: 3 NYSLMLKYIIIGDTGVGKSCIVLQLIENQIRQEHDATIGVEFGAKIIKVNSMNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSI RSYYR A GALLVYDIT+R++F++L W+E+ + + N NM I L GNK
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITKRDSFHNLQRWMEEIKNNGNANMVITLCGNKV 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RAV+ EEG QFA+++ L+FLE SA+ NV+ AF ++ +IL I +G + +
Sbjct: 123 DLESERAVTYEEGWQFAQQHQLIFLETSAKQGINVQSAFYQSTQRILNQIDDGTI-VLGQ 181
Query: 182 QSGIKVG 188
GIK+G
Sbjct: 182 DPGIKIG 188
>gi|299471595|emb|CBN76817.1| Rab2B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 138/183 (75%), Gaps = 4/183 (2%)
Query: 6 LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQ 65
LFKYIIIG+T VGKS +LLQFT+++F+ HD+TIGVEFGA+ V+I +KL+IWDTAGQ
Sbjct: 5 LFKYIIIGNTAVGKSAILLQFTERQFRDAHDMTIGVEFGAKDVSIGDAQVKLEIWDTAGQ 64
Query: 66 ESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQH-ANPNMSIMLVGNKCDLA 124
ESF SITRSYYRG G LLV+DIT R++F L WL++AR + ANP++S+ML+ NK DLA
Sbjct: 65 ESFLSITRSYYRGTDGCLLVFDITDRKSFEALPRWLDEARMNSANPDLSVMLIANKADLA 124
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
+R V+ EEG+ FA ++GLLF+E SAR A VE AFI TA +I +++ N SG
Sbjct: 125 EKRCVTTEEGQAFADKHGLLFMEMSARNAAQVERAFIGTAERIFSDLEA---HPRNKPSG 181
Query: 185 IKV 187
I++
Sbjct: 182 IQL 184
>gi|351715409|gb|EHB18328.1| Ras-related protein Rab-4B, partial [Heterocephalus glaber]
Length = 232
Score = 214 bits (544), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 109/195 (55%), Positives = 138/195 (70%), Gaps = 8/195 (4%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
+S D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIW
Sbjct: 16 ISSDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIW 75
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 76 DTAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNK 135
Query: 121 CDLAHRRAVSKEEGEQFAKEN-------GLLFLEASARTAQNVEEAFIKTAAKILQNIQE 173
DL R V+ E +F +EN L+FLE SA T +NVEEAF+K A IL I
Sbjct: 136 KDLDPEREVTFLEASRF-QENVLAPASPELMFLETSALTGENVEEAFLKCARTILNKIDS 194
Query: 174 GALDAVNDQSGIKVG 188
G LD SGI+ G
Sbjct: 195 GELDPERMGSGIQYG 209
>gi|340500686|gb|EGR27547.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 223
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 134/187 (71%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY YLFKYI+IGDTGVGKSCL+LQFTD R + HD+TIG+EF + V ++ + IKLQIWD
Sbjct: 3 SYFYLFKYIVIGDTGVGKSCLVLQFTDGRVKERHDVTIGIEFAVKTVRVNQKNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+F+SIT+SYYR A GA+LVYDIT++E+F ++S WL++ + + N + L+GNK
Sbjct: 63 TAGQENFKSITKSYYRSAIGAILVYDITKKESFQNISKWLQEIKTNGNKYIVFALIGNKK 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R +SKEE E FA +N LLF E +A ++V AFIK + +I Q I+ + +
Sbjct: 123 DKEENRQISKEEAESFAHQNNLLFFELTANNNESVNNAFIKISERIEQLIKNQQIQLGDL 182
Query: 182 QSGIKVG 188
G+K+G
Sbjct: 183 NQGVKIG 189
>gi|73535722|pdb|1YU9|A Chain A, Gppnhp-Bound Rab4a
Length = 175
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 132/168 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 7 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 67 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
DL R V+ E +FA+EN L+FLE SA T ++VEEAF++ A KIL
Sbjct: 127 DLDADREVTFLEASRFAQENELMFLETSALTGEDVEEAFVQCARKILN 174
>gi|444436406|gb|AGE09571.1| RABA-like protein [Eucalyptus cladocalyx]
Length = 281
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 73 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 132
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 133 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 192
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NVE AF + +I + + AL+
Sbjct: 193 LRHLLAVSTEDGKSFAEREALFFMETSALEATNVENAFAEVLTQIYNIVSKKALETSEQA 252
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G V +G+ +D + +RGGCCS
Sbjct: 253 NGSAVP-SQGEKIDVGKDVSAVKRGGCCS 280
>gi|324522578|gb|ADY48083.1| Ras-related protein Rab-4B, partial [Ascaris suum]
Length = 214
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 133/187 (71%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY+YL K++IIG+ G GKSC++ QF +++F+ TIGVEFG+RMV + G+ +KLQIWD
Sbjct: 6 SYNYLLKFLIIGNAGTGKSCIMHQFIERKFKANSAHTIGVEFGSRMVALGGKKVKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGALLVYDIT RE++N L WL +AR A ++ ++LVGNK
Sbjct: 66 TAGQERFRAVTRSYYRGAAGALLVYDITNRESYNALQQWLIEARNLATAHIVVVLVGNKK 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V E QFA+EN L F+E SA +NVEE F+K A IL I+ G +D
Sbjct: 126 DLHEERQVMFLEASQFAQENDLTFMETSALNGENVEETFLKCAKTILSKIESGEIDLECI 185
Query: 182 QSGIKVG 188
G+++G
Sbjct: 186 GPGVEIG 192
>gi|47225037|emb|CAF97452.1| unnamed protein product [Tetraodon nigroviridis]
Length = 233
Score = 213 bits (541), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 116/232 (50%), Positives = 145/232 (62%), Gaps = 25/232 (10%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWDTA
Sbjct: 2 DFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWDTA 61
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK DL
Sbjct: 62 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIIIILCGNKKDL 121
Query: 124 AHRRAVSKEEGEQFAKENG------------------------LLFLEASARTAQNVEEA 159
R V+ E +FA+ENG L+FLE SA T +NVEE
Sbjct: 122 DADREVTFLEASRFAQENGSSSLCFPSHFPALPWTANVLSILELMFLETSALTGENVEEG 181
Query: 160 FIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
F+K A IL I G LD SGI+ G + R GT +Q CS
Sbjct: 182 FLKCARTILNKIDSGELDPERMGSGIQYGDASLRQLRQPR-GTTAQNKQQCS 232
>gi|449438115|ref|XP_004136835.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
gi|449530235|ref|XP_004172101.1| PREDICTED: ras-related protein Rab11D-like [Cucumis sativus]
Length = 219
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 139/209 (66%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT +F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNQFNLESKSTIGVEFATKSLEIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PNM +ML+GNKCD
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRPTFENAARWLKELRDHTDPNMVVMLIGNKCD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H V E+G+ FA+ L F+E SA A NVE AF + ++I + + + +++A +
Sbjct: 130 LRHLILVPTEDGKSFAERESLYFMETSALDATNVESAFTEVLSQIYRIVSKRSVEAGDIG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S +GQ D +V +R GCCS
Sbjct: 190 SASTTLPSKGQTIDVKDDSSVLKRIGCCS 218
>gi|14275890|dbj|BAB58891.1| rab-like protein E [Giardia intestinalis]
Length = 192
Score = 212 bits (539), Expect = 8e-53, Method: Compositional matrix adjust.
Identities = 96/190 (50%), Positives = 128/190 (67%)
Query: 20 SCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGA 79
SCLLLQFT++RFQ HD+T+GVE+G R + + G+ IK QIWDT GQESFRSITRSYYRG+
Sbjct: 1 SCLLLQFTEQRFQNAHDMTVGVEYGTRTIEVGGKKIKAQIWDTCGQESFRSITRSYYRGS 60
Query: 80 AGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAK 139
ALLVYDITRR +F H+++WLE+ R + +I+LVGNK D R V+ +EGE+FAK
Sbjct: 61 CCALLVYDITRRASFEHVANWLEECRTYGGDKTTILLVGNKTDRESSRMVTYDEGEKFAK 120
Query: 140 ENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGAR 199
EN L F+E SA+T NVEEAF+ A +L + G +D ++ G+K +
Sbjct: 121 ENNLFFIETSAKTNSNVEEAFMIIAKAVLDKVNSGEIDITDESCGVKAASTSKNTVNMKT 180
Query: 200 DGTVSQRGGC 209
+ + GGC
Sbjct: 181 EAPSKESGGC 190
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + A+I + + + A++A D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVSKRAVEAGEDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G GRG+ + D + ++GGCCS
Sbjct: 191 AS---GPGRGEKINIKDDVSAVKKGGCCS 216
>gi|330791931|ref|XP_003284044.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
gi|330827546|ref|XP_003291835.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325077958|gb|EGC31637.1| hypothetical protein DICPUDRAFT_39631 [Dictyostelium purpureum]
gi|325085973|gb|EGC39370.1| hypothetical protein DICPUDRAFT_26958 [Dictyostelium purpureum]
Length = 208
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 143/210 (68%), Gaps = 12/210 (5%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
YLFK++I+GD VGKSCLL +FTD RF+ TIGV+F +R++ I GR +KLQIWDTAG
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRFKSQSSHTIGVDFASRIIDIQGRAVKLQIWDTAG 65
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+TRSYYRG++G +LVYD++ RE++NH+++WL DAR A+ +++I+LVGNK DL+
Sbjct: 66 QERFRSVTRSYYRGSSGVVLVYDVSSRESYNHINNWLSDARALASKDVTIILVGNKADLS 125
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
R VS E + A+EN LLF+EASA + VEE F+K A I+ I G D +Q G
Sbjct: 126 EEREVSFLEASRLAQENDLLFMEASALSGDGVEELFLKCARSIITKIDNG--DVNLEQLG 183
Query: 185 IKVGYG----RGQGPSGARDGTVSQRGGCC 210
+++ G RG G + + CC
Sbjct: 184 VQISEGDLSKRGNNSGGDSNKS------CC 207
>gi|188509942|gb|ACD56628.1| putative GTP-binding protein [Gossypium raimondii]
Length = 218
Score = 212 bits (539), Expect = 9e-53, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA++ L F+E SA A NVE AF + +I + + A++ +D
Sbjct: 130 LRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNVVSKKAMETSDDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ +D + ++GGCCS
Sbjct: 190 AASAVP-SKGEKIDVGKDVSAMKKGGCCS 217
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + A+I + + + A++A D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLAQIYRIVDKRAVEAGEDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G GRG+ + D + ++GGCCS
Sbjct: 191 AS---GPGRGEKINIKDDVSAVKKGGCCS 216
>gi|49333370|gb|AAT64010.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA++ L F+E SA A NVE AF + +I + + A++ +D
Sbjct: 130 LRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQIYNIVSKKAMETSDDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ +D + ++GGCCS
Sbjct: 190 AASAVP-SKGEKIDVGKDVSAMKKGGCCS 217
>gi|115439941|ref|NP_001044250.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|14209558|dbj|BAB56054.1| GTP-binding protein GTP1 [Oryza sativa Japonica Group]
gi|32966065|gb|AAP92129.1| GTP-binding protein GTP1 [Oryza sativa]
gi|113533781|dbj|BAF06164.1| Os01g0750000 [Oryza sativa Japonica Group]
gi|125527712|gb|EAY75826.1| hypothetical protein OsI_03740 [Oryza sativa Indica Group]
gi|125572029|gb|EAZ13544.1| hypothetical protein OsJ_03460 [Oryza sativa Japonica Group]
gi|215765620|dbj|BAG87317.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 221
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 142/209 (67%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 15 YDYLFKTVLIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSIQVDGKVVKAQIWDT 74
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF++++ WL++ R H +P++ +MLVGNK D
Sbjct: 75 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSD 134
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+++A+ L F+E SA A NVE AF + +I Q + + ++A +D
Sbjct: 135 LRHLVAVSTEDGKEYAEAESLYFMETSALDATNVENAFAEVLTQIYQTVSKKTVEASDDG 194
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S + +G+ + D + +R GCCS
Sbjct: 195 SNAPI---KGEKINVKDDVSALKRIGCCS 220
>gi|449433734|ref|XP_004134652.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449479217|ref|XP_004155538.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|307136190|gb|ADN34029.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 218
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNLDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR T+ ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTYENVEKWLKELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+ + FA+ L F+E SA A NV+ AF + +I + + A++ ND
Sbjct: 130 LRHLVAVSTEDAKSFAETESLYFMETSALEATNVDNAFAEVLTQIYHIVSKKAME-TNDD 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ ++D + ++GGCCS
Sbjct: 189 AAASAVIAKGEKIDISKDVSEVKKGGCCS 217
>gi|188509957|gb|ACD56641.1| putative GTP-binding protein [Gossypioides kirkii]
Length = 218
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA++ L F+E SA A NVE AF + ++ + + A++ +D
Sbjct: 130 LRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEIAFAEVLTQVYNVVSKKAMETSDDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ +D + ++GGCCS
Sbjct: 190 AASAVP-SKGEKIDVGKDVSAMKKGGCCS 217
>gi|49333384|gb|AAT64023.1| putative GTP-binding protein [Gossypium hirsutum]
Length = 218
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA++ L F+E SA A NVE +F + +I I + A++ +D
Sbjct: 130 LRHLVAVSTEDGKSFAEKESLYFMETSALEATNVEISFAEVLTQIYNVISKKAMETSDDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ +D + ++GGCCS
Sbjct: 190 AASAVP-SKGEKIDVGKDVSAMKKGGCCS 217
>gi|145519353|ref|XP_001445543.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833776|emb|CAI39354.1| rab_A60 [Paramecium tetraurelia]
gi|124412998|emb|CAK78146.1| unnamed protein product [Paramecium tetraurelia]
Length = 203
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 143/210 (68%), Gaps = 7/210 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+IIIGDT VGKSC+L QF +++F+ H++T+GVEFGA+++ ++ + IKLQIW
Sbjct: 1 MSYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMTVGVEFGAKILNLENKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+F+SITR YYR AAG +LVYDITRRE+F ++ W+++ R H M I+LVGNK
Sbjct: 61 DTAGQETFKSITRQYYRSAAGGILVYDITRRESFENVREWIKECRTHGTQEMVIVLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL + + G A EN LLF+E SA+ N+ E F + AA++L+ +Q+ N
Sbjct: 121 VDLEKQYNIHNING--LAYENNLLFIETSAKDNLNIIETFSQAAAQVLKVVQKS--QQKN 176
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ G++VGY Q G + S + CC
Sbjct: 177 ELPGVRVGYAIDQ-TKGQQSSQSSNK--CC 203
>gi|116787388|gb|ABK24490.1| unknown [Picea sitchensis]
gi|116789079|gb|ABK25109.1| unknown [Picea sitchensis]
Length = 216
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKMIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ R H N+ +MLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELRDHTEHNIVVMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ GL F+E SA + NVE AF + +I + + + ALD D
Sbjct: 129 LRHLRAVSTEDAQTFAEREGLYFIETSALESTNVENAFKQVLTQIYRIVSKKALDVSEDN 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +GQ + D T +++ GCCS
Sbjct: 189 AA---APPQGQTINVKDDVTATKKVGCCS 214
>gi|395333859|gb|EJF66236.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 219
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 108/223 (48%), Positives = 152/223 (68%), Gaps = 20/223 (8%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++TI + + +KLQ
Sbjct: 4 VAWHYVLKFIITGDAAVGKSSLLIRLTDQRFLANPDPTLGVEFGSKLITIPEENKVVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T R++F ++ SWL+D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTSRQSFVNVRSWLQDVREHADPHLTCILVG 123
Query: 119 NKCDLA----------HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKIL 168
NK DL +R V+ EEGE +A+E GLLFLEASA++ +NVE AF + IL
Sbjct: 124 NKIDLCTDDPNAPAPKRKREVTTEEGELWAQEEGLLFLEASAKSGENVEAAFERATRDIL 183
Query: 169 QNIQEGALDAVNDQS-GIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ ++ G D +D+S G+K+ PS +GGCC
Sbjct: 184 EKVRRGVFD--DDRSPGVKL-----SKPSSGVALDEQAKGGCC 219
>gi|73535777|pdb|1Z0K|A Chain A, Structure Of Gtp-Bound Rab4q67l Gtpase In Complex With The
Central Rab Binding Domain Of Rabenosyn-5
gi|73535779|pdb|1Z0K|C Chain C, Structure Of Gtp-Bound Rab4q67l Gtpase In Complex With The
Central Rab Binding Domain Of Rabenosyn-5
Length = 172
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 99/168 (58%), Positives = 131/168 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAG E FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGLERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
DL R V+ E +FA+EN L+FLE SA T ++VEEAF++ A KIL
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGEDVEEAFVQCARKILN 171
>gi|145549329|ref|XP_001460344.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834473|emb|CAI44556.1| rab_A56 [Paramecium tetraurelia]
gi|124428173|emb|CAK92947.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 141/209 (67%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YLFK+II+G++ VGKSCLLLQ+T+ RFQ +D TIGVE+G++ + D + IKLQ+WD
Sbjct: 3 NYHYLFKFIIVGESNVGKSCLLLQYTEGRFQVGYDATIGVEYGSKEIIYDDKLIKLQLWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITR+YYRG+ G LVYDITRR TF+ + +W++D RQ N + +LVGNKC
Sbjct: 63 TAGQESFRSITRAYYRGSIGCFLVYDITRRITFDRIQAWVKDVRQDTNNRIEFLLVGNKC 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R+ VS +EG Q + + G F E SA+T +NVE F + KI +NI+ +D +
Sbjct: 123 DLKDRK-VSYDEGRQLSIQLGCEFQETSAKTGENVEFIFEQLTKKIYENIKTNKIDPHDP 181
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
GIK+G G+ Q+ CC
Sbjct: 182 NHGIKIG-RIGENEKITEIPKQKQKSICC 209
>gi|440801985|gb|ELR22925.1| RAB4, putative [Acanthamoeba castellanii str. Neff]
Length = 204
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 129/183 (70%), Gaps = 5/183 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YLFK+IIIGD GKSCLL +F D +F TIGVEFG++++ I G IKLQIWDT
Sbjct: 5 YNYLFKFIIIGDAATGKSCLLHRFIDNKFMRDSTHTIGVEFGSKIINIQGNNIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQ +TRSYYRGAAGALLVYDIT RE++NHLS+WLEDAR A+ + I+LVGNK D
Sbjct: 65 AGQ-----VTRSYYRGAAGALLVYDITSRESYNHLSTWLEDARTLASAGIVIILVGNKKD 119
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R V+ E +FA+EN L+FLE SA T NVEE F+K A I ++ A+D +
Sbjct: 120 LEDEREVTFIEASRFAQENNLMFLETSALTGDNVEEVFLKCARSIFSKVEAKAVDPKDSG 179
Query: 183 SGI 185
SGI
Sbjct: 180 SGI 182
>gi|393245703|gb|EJD53213.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 229
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/225 (46%), Positives = 144/225 (64%), Gaps = 15/225 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQI 59
S+DY+ K++IIGD GVGKS +L++ TD+RF D T+GVEFG++++ + + + +KLQ
Sbjct: 5 SWDYVLKFVIIGDAGVGKSSILVRLTDQRFLHSPDPTLGVEFGSKLIYVPDEDKTVKLQC 64
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAG ESFRSITRSYYRGAAGAL+VYD+T R +FN+ SWL+D RQHA+P++S +LV N
Sbjct: 65 WDTAGTESFRSITRSYYRGAAGALIVYDVTSRNSFNNCRSWLKDVRQHADPHLSAILVAN 124
Query: 120 KCDLAH-------------RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
K DL R VS+EE E++AKE +LF+E SA++ QNV+ AF + A
Sbjct: 125 KVDLCQAAAEGSSAAADGPSRDVSREEAERWAKEEDMLFIEVSAKSGQNVDLAFDQAARD 184
Query: 167 ILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
IL+ I G + G P+ T + GCCS
Sbjct: 185 ILRKINSGVFEDSKSPGVRSAGKQASADPNALTLETSDTKQGCCS 229
>gi|339235967|ref|XP_003379538.1| GTP-binding protein yptV4 [Trichinella spiralis]
gi|316977780|gb|EFV60837.1| GTP-binding protein yptV4 [Trichinella spiralis]
Length = 375
Score = 210 bits (535), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 96/171 (56%), Positives = 131/171 (76%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y+YLFK++IIG++G GKSC+L QF + +F+ TIG+EFG+++V I R IKLQ+WD
Sbjct: 4 TYNYLFKFLIIGNSGTGKSCVLHQFLENKFKQDTAHTIGIEFGSKVVKIQDRSIKLQVWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+T++YY GAA ALLVYDIT R++FN ++ WL DAR A+P + ++L+GNK
Sbjct: 64 TAGQERFRSLTKNYYNGAACALLVYDITCRQSFNAIAQWLSDARSLASPQIIVILIGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 172
DL RR V+ EG QFA+ENG+LFLE SA T +N+EE F++ A IL I+
Sbjct: 124 DLEDRREVTFMEGSQFAQENGMLFLETSALTGENIEETFLRCARSILTKIE 174
>gi|351722751|ref|NP_001236487.1| uncharacterized protein LOC100499822 [Glycine max]
gi|255626919|gb|ACU13804.1| unknown [Glycine max]
Length = 218
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK + IGD+GVGKS LL +FT F TIGVEF + + ID + IK QIWDT
Sbjct: 10 YDYLFKLVFIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLDIDAKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA++ L F+E SA A NVE AF + ++I + + + A++A N+
Sbjct: 130 LRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRAVEAGNNA 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V +GQ + D +V ++ GCCS
Sbjct: 190 SSSAVP-SKGQTINVKDDSSVLKKIGCCS 217
>gi|393220280|gb|EJD05766.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 214
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 105/220 (47%), Positives = 146/220 (66%), Gaps = 20/220 (9%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQI 59
++DY+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++ I + + +KLQ
Sbjct: 3 NWDYVLKFIICGDAAVGKSSLLVRLTDQRFLANPDPTLGVEFGSKLIYIPDEDKTVKLQC 62
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAG ESFRSITRSYYRGAAG LLVYD+T R +F + +WL+D R+HA+PN++ +LVGN
Sbjct: 63 WDTAGTESFRSITRSYYRGAAGCLLVYDVTSRTSFENARTWLDDVREHADPNLTCILVGN 122
Query: 120 KCDL----AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGA 175
K DL A +R V+ E+GE +A++NGLLF+EASA++ NVE+AF + IL ++ G
Sbjct: 123 KVDLVESGARQREVTTEQGETWARDNGLLFVEASAKSGLNVEQAFFTASKDILDKVKRGV 182
Query: 176 LDAVNDQSGIKVGYGRGQGPSGARDGTV-----SQRGGCC 210
D G G PS + + S + GCC
Sbjct: 183 FDQ---------GKSPGVKPSKPNNNVLALEAPSVKQGCC 213
>gi|328860505|gb|EGG09611.1| hypothetical protein MELLADRAFT_115734 [Melampsora larici-populina
98AG31]
Length = 214
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/210 (50%), Positives = 135/210 (64%), Gaps = 2/210 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWD
Sbjct: 6 SYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMESKSTIGVEFATRSIVVDSKTIKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI++++++ H+ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKQQSYTHVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA EN L F+E SA A NVE AF I + + AL++ D
Sbjct: 126 DLRHLRAVPTEEAKAFAAENNLSFIETSAMDASNVESAFQNILTDIYRIVSSKALESSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGG-CC 210
G G P+ A DG S GG CC
Sbjct: 186 SVGPTSGSTITVTPT-ADDGAKSNAGGKCC 214
>gi|281209429|gb|EFA83597.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 193
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 93/161 (57%), Positives = 124/161 (77%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
++Y + KYI++GD+ VGKS L LQF D+RF P + TIGVEFG+R++ ID + +K+Q+W
Sbjct: 19 VNYTHFLKYIMVGDSAVGKSNLTLQFVDRRFSPNSEFTIGVEFGSRIIDIDNKQLKIQVW 78
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRSITR+YYRGA GA++VYDITRRETF+ L+SWL D R+++ +++I L+GNK
Sbjct: 79 DTAGQEKFRSITRAYYRGAVGAMIVYDITRRETFDSLTSWLSDCRKYSTGDITITLIGNK 138
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFI 161
DL R VS E + FA+E+GLLF EASA+T NV E I
Sbjct: 139 SDLESARQVSTAEAQSFAEEHGLLFFEASAKTGTNVNEILI 179
>gi|297848916|ref|XP_002892339.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
gi|297338181|gb|EFH68598.1| hypothetical protein ARALYDRAFT_887842 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + ++G+ +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALL+YD+TR TF + + WL + R H +PN+ +ML+GNKCD
Sbjct: 70 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV EE + FA+ L F+E SA A NVE AF + ++I + + + ++D D
Sbjct: 130 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVESAFTEVLSQIHKIVSKRSVDGGGDS 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G+G+ + DG+V +R GCCS
Sbjct: 190 TELP---GKGETINVKEDGSVLKRMGCCS 215
>gi|145513036|ref|XP_001442429.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124409782|emb|CAK75032.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y +FKYIIIGDTGVGKS +LLQ + + HD TIGVEFGA+++ ++G IKLQIWD
Sbjct: 3 NYSLMFKYIIIGDTGVGKSSILLQLIENEIREQHDATIGVEFGAKIIKVNGMNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSI RSYYR A GALLVYDIT + +F++L W+E+ + + N NM I+L GNK
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITNKNSFHNLQRWMEEIKNNGNANMVIVLCGNKI 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RAV+ EEG Q+A+ L+FLE SA+ NV+ AF ++ +ILQ I + + +
Sbjct: 123 DLESERAVTYEEGWQYAQSQSLIFLEISAKQGINVQSAFYQSTQRILQEIDDQKI-LLGQ 181
Query: 182 QSGIKVG 188
GIK+G
Sbjct: 182 DPGIKIG 188
>gi|281337299|gb|EFB12883.1| hypothetical protein PANDA_010496 [Ailuropoda melanoleuca]
Length = 219
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 111/218 (50%), Positives = 142/218 (65%), Gaps = 20/218 (9%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWDTA
Sbjct: 1 DFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK DL
Sbjct: 61 GQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKKDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFL-----------EASARTAQNVEEAFIKTAAKILQNIQ 172
R V+ E +FA+ENG E SA T +NVEEAF++ A KIL I+
Sbjct: 121 DADREVTFLEASRFAQENGNFAFCLLSLLELMFLETSALTGENVEEAFVQCARKILNKIE 180
Query: 173 EGALDAVNDQSGIKVGYG---------RGQGPSGARDG 201
G LD SGI+ G R Q PS G
Sbjct: 181 SGELDPERMGSGIQYGDAALRQLRSPRRAQAPSAQECG 218
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF + WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE+AF + +I + + + A++A D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVEDAFAEVLTQIYRIVSKRAVEAGEDS 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G+G+ + D + ++GGCCS
Sbjct: 191 AS---GPGKGEKINMKDDVSAVKKGGCCS 216
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + +I + + + A++A D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRAVEAGEDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G+G+ + D + ++GGCCS
Sbjct: 191 AS---GPGKGEKINIKDDVSAVKKGGCCS 216
>gi|330841763|ref|XP_003292861.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
gi|325076873|gb|EGC30626.1| hypothetical protein DICPUDRAFT_41201 [Dictyostelium purpureum]
Length = 206
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 96/186 (51%), Positives = 137/186 (73%), Gaps = 2/186 (1%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
YLFK++I+GD VGKSCLL +FTD RF+ TIGV+F ++++ I GR +KLQIWDTAG
Sbjct: 6 YLFKFLILGDASVGKSCLLHRFTDNRFKSQSSHTIGVDFASKIIDIQGRAVKLQIWDTAG 65
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+TRSYYRG++G +LVYD++ RE++NH+++WL DAR A+ +++++LVGNK DL+
Sbjct: 66 QERFRSVTRSYYRGSSGVVLVYDVSSRESYNHINNWLSDARALASKDVTVILVGNKADLS 125
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSG 184
R VS E + A+EN LLF+EASA + VEE F+K A I+ I G ++ +Q G
Sbjct: 126 EEREVSFLEASRLAQENDLLFMEASALSGDGVEELFLKCARSIITKIDNGEVNL--EQLG 183
Query: 185 IKVGYG 190
+++ G
Sbjct: 184 VQISEG 189
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+ + FA++ L F+E SA A NVE AF + +I + + A++A ++
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G +D + ++GGCCS
Sbjct: 190 ANVP---SKGDKIDIGKDVSAVKKGGCCS 215
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NV+ AF + +I + + + A++A +D
Sbjct: 130 LRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAMEAGDDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ +D + +R GCCS
Sbjct: 190 AASAVP-SKGEKIDVGKDVSAMKRVGCCS 217
>gi|449459304|ref|XP_004147386.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
gi|449500802|ref|XP_004161198.1| PREDICTED: ras-related protein RABA1c-like [Cucumis sativus]
Length = 218
Score = 209 bits (531), Expect = 7e-52, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA++ L F+E SA A NVE +F + +I + + A++A +
Sbjct: 130 LRHLVAVSTEDGKSFAEKESLYFMETSALEATNVENSFAEVLTQIYHIVSKKAMEAGDGT 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ ++D + ++ GCCS
Sbjct: 190 AAASVP-PKGEKIDVSKDVSAVKKAGCCS 217
>gi|302691862|ref|XP_003035610.1| hypothetical protein SCHCODRAFT_65238 [Schizophyllum commune H4-8]
gi|300109306|gb|EFJ00708.1| hypothetical protein SCHCODRAFT_65238 [Schizophyllum commune H4-8]
Length = 223
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 108/222 (48%), Positives = 144/222 (64%), Gaps = 15/222 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQI 59
++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++TI + + +KLQ
Sbjct: 5 NWHYVLKFIITGDASVGKSSLLVRLTDQRFLSNPDPTLGVEFGSKLITIPEENKIVKLQC 64
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAG ESFRSITRSYYRGAAG LLVYD+T R +F++L +WL D R+HA+P+++ +LVGN
Sbjct: 65 WDTAGTESFRSITRSYYRGAAGCLLVYDVTSRRSFDNLPTWLADVREHADPHLTCILVGN 124
Query: 120 KCDLAH----------RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
K DL R VS +EGE FAKEN LLF+EASA++ QNVE AF + IL
Sbjct: 125 KVDLCEDNDGATATKRDRQVSTDEGEIFAKENNLLFVEASAKSGQNVELAFEQATRDILD 184
Query: 170 NIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
++ G D D V + + A +G S CCS
Sbjct: 185 KVRRGVFD---DDRSPGVKLSKPANTNLALEGQPSHGTTCCS 223
>gi|115464897|ref|NP_001056048.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|46575955|gb|AAT01316.1| putative GTP-binding protein RIC2 [Oryza sativa Japonica Group]
gi|113579599|dbj|BAF17962.1| Os05g0516800 [Oryza sativa Japonica Group]
gi|215692843|dbj|BAG88185.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632234|gb|EEE64366.1| hypothetical protein OsJ_19207 [Oryza sativa Japonica Group]
Length = 220
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 14 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF+++ WL + R H +P++ ML+GNK D
Sbjct: 74 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSD 133
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G++FA+ + F+E SA A NV+ AF + +I Q + + ++A D
Sbjct: 134 LRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDG 193
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S G G+G+ + D + +R GCCS
Sbjct: 194 SA---GPGKGEKINVKDDVSAMKRVGCCS 219
>gi|125552993|gb|EAY98702.1| hypothetical protein OsI_20633 [Oryza sativa Indica Group]
Length = 220
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 14 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF+++ WL + R H +P++ ML+GNK D
Sbjct: 74 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDPSIVCMLIGNKSD 133
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G++FA+ + F+E SA A NV+ AF + +I Q + + ++A D
Sbjct: 134 LRHLVAVSTEDGKEFAEAESMYFMETSALDATNVDNAFAEVLTQIYQIVNKKPVEAPEDG 193
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S G G+G+ + D + +R GCCS
Sbjct: 194 SA---GPGKGEKINVKDDVSAMKRVGCCS 219
>gi|213408535|ref|XP_002175038.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
gi|212003085|gb|EEB08745.1| GTPase Ypt3 [Schizosaccharomyces japonicus yFS275]
Length = 214
Score = 208 bits (530), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 134/208 (64%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL++FT F TIGVEF R + +D + IK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELRDHADSNIVIMLVGNKTD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EE + FA EN L F+E SA A NVEEAF +I + + A++ ++
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRAMEGGDEG 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ G P+ G G CC
Sbjct: 187 AHPSAGQTLNIAPTIGDSGKSKSSGQCC 214
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NV+ AF + +I + + + A++ D+
Sbjct: 130 LRHLVAVSTEDGKSFAERESLYFMETSALEATNVDSAFAEVLTQIYRIVSKKAME-TGDE 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ ++D + +R GCCS
Sbjct: 189 AAASAVPSKGEKIDVSKDVSAMKRVGCCS 217
>gi|301102718|ref|XP_002900446.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
gi|262102187|gb|EEY60239.1| Rab2 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 208 bits (530), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 104/167 (62%), Positives = 134/167 (80%), Gaps = 2/167 (1%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQE 66
KYIIIGD+ VGKS LLLQFT++ FQP+HDLTIGVEFGA+++ +DGR +KL+IWDTAGQE
Sbjct: 6 LKYIIIGDSEVGKSSLLLQFTEQHFQPIHDLTIGVEFGAKLLEVDGRKVKLEIWDTAGQE 65
Query: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHA-NPNMSIMLVGNKCDLA- 124
+F SITRSYYRGA GALLVYD++RRE+F HL WL++ Q+ N + IM+VG KCD++
Sbjct: 66 TFLSITRSYYRGADGALLVYDVSRRESFEHLGRWLQECHQNCHNDEVEIMVVGMKCDVSE 125
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI 171
R V++EEG +A+ +GL F+EASA+TA NVE+AF TA IL+N
Sbjct: 126 KEREVTEEEGRNWAEAHGLYFIEASAKTALNVEQAFSLTATTILRNF 172
>gi|118386463|ref|XP_001026350.1| Ras family protein [Tetrahymena thermophila]
gi|89308117|gb|EAS06105.1| Ras family protein [Tetrahymena thermophila SB210]
Length = 261
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 98/186 (52%), Positives = 134/186 (72%), Gaps = 8/186 (4%)
Query: 16 GVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSY 75
GVGKS L++QFT + F+ HD+T+GVEFGA+++ I+G+ +KLQIWDTAGQE FRSI RSY
Sbjct: 52 GVGKSSLIMQFTQEVFRDKHDITVGVEFGAKVIKINGQSVKLQIWDTAGQEDFRSIVRSY 111
Query: 76 YRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL-------AHRRA 128
YR AGAL+VYDITRR+TF H++ W+E+A + N ++ ML+GNK DL +R
Sbjct: 112 YRSTAGALVVYDITRRDTFKHITRWVEEATNNGNSTLTFMLIGNKSDLESQQIQFVFKRE 171
Query: 129 VSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV-NDQSGIKV 187
VS EEG Q AKE+ +LF+E SA+T NVE+ F +TA IL ++ G ++A N SG+K+
Sbjct: 172 VSYEEGLQLAKEHNMLFIETSAKTKHNVEQTFCQTAVTILDKVKNGEIEATANGSSGVKL 231
Query: 188 GYGRGQ 193
G + Q
Sbjct: 232 GEVQKQ 237
>gi|302771698|ref|XP_002969267.1| rab family GTPase [Selaginella moellendorffii]
gi|302810305|ref|XP_002986844.1| rab family GTPase [Selaginella moellendorffii]
gi|300145498|gb|EFJ12174.1| rab family GTPase [Selaginella moellendorffii]
gi|300162743|gb|EFJ29355.1| rab family GTPase [Selaginella moellendorffii]
Length = 217
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR T+ ++ WL++ + H + N+ +MLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITRPVTYENVERWLKELKDHTDSNIVVMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+G+ F++ GL F+E SA + NVE AF + +I + + + ALD D
Sbjct: 129 LRHLRAVSTEDGQAFSEREGLYFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S G+ G D T +++ GCCS
Sbjct: 189 SAAP-AKGQTINVGGKDDVTATKKVGCCS 216
>gi|355714845|gb|AES05136.1| RAB14, member RAS oncoprotein family [Mustela putorius furo]
Length = 148
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 114/141 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 8 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 68 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 127
Query: 122 DLAHRRAVSKEEGEQFAKENG 142
DL +R V+ EE +QFA+ENG
Sbjct: 128 DLEAQRDVTYEEAKQFAEENG 148
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+ + FA++ L F+E SA A NVE AF + +I + + A++A ++
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G +D + ++GGCCS
Sbjct: 190 ANVP---SKGDKIDIGKDVSAVKKGGCCS 215
>gi|15221477|ref|NP_172128.1| Ras-related protein RABA1a [Arabidopsis thaliana]
gi|114086|sp|P28185.1|RAA1A_ARATH RecName: Full=Ras-related protein RABA1a; Short=AtRABA1a; AltName:
Full=Ras-related protein Ara-2; AltName:
Full=Ras-related protein Rab11E; Short=AtRab11E
gi|8927677|gb|AAF82168.1|AC068143_10 Contains similarity to a Rab11 GTPase (Rab11a gene) from
Lycopersicon esculentum gb|AJ245570 and is a member of
the Ras family PF|00071. ESTs gb|T46264, gb|AI099600,
gb|AA404778, gb|AI997429, gb|T88574 come from this gene
[Arabidopsis thaliana]
gi|12083264|gb|AAG48791.1|AF332428_1 putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|217835|dbj|BAA00829.1| small GTP-binding protein [Arabidopsis thaliana]
gi|17644169|gb|AAL38782.1| putative GTP-binding protein RAB11D [Arabidopsis thaliana]
gi|20465351|gb|AAM20079.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332189861|gb|AEE27982.1| Ras-related protein RABA1a [Arabidopsis thaliana]
Length = 216
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + ++G+ +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALL+YD+TR TF + + WL + R H +PN+ +ML+GNKCD
Sbjct: 70 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV EE + FA+ L F+E SA A NVE AF + +I + + + ++D +
Sbjct: 130 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGES 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G+G+ + DG+V +R GCCS
Sbjct: 190 ADLP---GKGETINVKEDGSVLKRMGCCS 215
>gi|351722661|ref|NP_001235972.1| small GTP-binding protein [Glycine max]
gi|22597172|gb|AAN03473.1| small GTP-binding protein [Glycine max]
Length = 218
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + ID + IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDAKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA++ L F+E SA A NVE AF + ++I + + + ++A +
Sbjct: 130 LRHLVAVPTEDGKSFAEKESLYFMETSALEATNVENAFTEVLSQIYRIVSKRTVEAGKNA 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V +GQ + D +V ++ GCCS
Sbjct: 190 SSSAVP-SKGQTINVKDDSSVLKKIGCCS 217
>gi|334261577|gb|AEG74029.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 139/211 (65%), Gaps = 5/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ + H + N+ +MLVGNK
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSV 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS ++G+ F+++ GL F+E SA + NVE AF + +I + + + ALD D
Sbjct: 129 LRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQILTQIYRVVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPS--GARDGTVSQRGGCCS 211
S + G+GQ S D T +++ GCCS
Sbjct: 189 SAVP---GKGQTISVGNKDDVTATKKVGCCS 216
>gi|146077413|ref|XP_001463263.1| putative ras-related protein rab-14 [Leishmania infantum JPCM5]
gi|398010606|ref|XP_003858500.1| ras-related protein rab-14, putative [Leishmania donovani]
gi|134067347|emb|CAM65619.1| putative ras-related protein rab-14 [Leishmania infantum JPCM5]
gi|322496708|emb|CBZ31777.1| ras-related protein rab-14, putative [Leishmania donovani]
Length = 225
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 108/225 (48%), Positives = 144/225 (64%), Gaps = 15/225 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD VGKSCL+ FT++R++ TIGV+FG +V I+G +KLQ+W
Sbjct: 1 MSHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYDI+RR T+ H+ +WL DAR + P +LVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDISRRSTYAHIGTWLTDARANTGPETVFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE QFA E+ LLF+E S+ NVEE F+ TA +I + ++ G + V+
Sbjct: 121 SDLEEEREVSYEEAAQFAAEHNLLFVECSSLNGNNVEEVFLSTARRIHEKVKSGVMSPVD 180
Query: 181 DQSGIKV----------GYGRGQGPSGARDGT-----VSQRGGCC 210
+SG+++ G+ GP + GT + CC
Sbjct: 181 PESGVQLHAAAIPTSTANSGQTGGPVDLKAGTSGGVAAAAESSCC 225
>gi|145538704|ref|XP_001455052.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124422840|emb|CAK87655.1| unnamed protein product [Paramecium tetraurelia]
Length = 231
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/189 (51%), Positives = 132/189 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YL K+IIIGDT VGKSCLLLQFTD RF+ HD TIGVEFG+R I+ + IKLQ+WD
Sbjct: 3 NYHYLLKFIIIGDTCVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNTKINDKTIKLQVWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+F+SITRSYYRG+ G +LV+D+T R++F ++ W ++ + +A + + LV NK
Sbjct: 63 TAGQEAFKSITRSYYRGSIGGILVFDVTSRQSFEGVAKWYQEIQGYACDKIEMALVANKI 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FAK++G + E SA+T +NV+ F A IL+ I G +D +
Sbjct: 123 DLDAKREVQTEEAQAFAKKHGFAYFETSAKTGENVDTVFESMAQTILKRIDSGEIDPSQE 182
Query: 182 QSGIKVGYG 190
GIKVG G
Sbjct: 183 IYGIKVGPG 191
>gi|3024502|sp|Q40194.1|RB11D_LOTJA RecName: Full=Ras-related protein Rab11D
gi|1370148|emb|CAA98180.1| RAB11D [Lotus japonicus]
Length = 218
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 138/210 (65%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + +D + +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA+ L F+E SA A NVE AF + +I + + + A++A
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEA--GD 187
Query: 183 SGIKVGY-GRGQGPSGARDGTVSQRGGCCS 211
SG G +GQ + D +V +R GCCS
Sbjct: 188 SGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>gi|157864504|ref|XP_001680962.1| putative ras-related protein rab-14 [Leishmania major strain
Friedlin]
gi|68124255|emb|CAJ07017.1| putative ras-related protein rab-14 [Leishmania major strain
Friedlin]
Length = 225
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 134/187 (71%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD VGKSCL+ FT++R++ TIGV+FG +V I+G +KLQ+W
Sbjct: 1 MSHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYDI+RR T+ H+ +WL DAR + P +LVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDISRRSTYAHIGTWLTDARANTGPETVFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE QFA E+ LLF+E S+ NVEE F+ TA +I + ++ G + V+
Sbjct: 121 SDLEEEREVSYEEAAQFAAEHNLLFVECSSLNGNNVEEVFLSTARRIHEKVKSGVMSPVD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|145514760|ref|XP_001443285.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834275|emb|CAI44502.1| rab_C33 [Paramecium tetraurelia]
gi|124410663|emb|CAK75888.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 139/198 (70%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFK+II+GD VGKSC+LL++T+K+F+ HD TIGVEFG++++ + + +K+QIWDT
Sbjct: 4 YHYLFKFIIVGDASVGKSCILLRYTEKQFRDEHDTTIGVEFGSQVLKKNDKTLKIQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESF+SITRSYY+G+ G LLV+DIT ++F+++ W D + A N +I+LVGNK D
Sbjct: 64 AGQESFKSITRSYYKGSIGVLLVFDITNPDSFHNVQKWYNDVNEQAASNCTIVLVGNKTD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R ++ EG+ A + + ++E SA+T QN++ F TA +IL I + +D N+
Sbjct: 124 LESQRMITTNEGKALADQYKMQYIETSAKTNQNIDLLFETTAQQILDKIDKHLIDFANED 183
Query: 183 SGIKVGYGRGQGPSGARD 200
SGIK+G Q G +D
Sbjct: 184 SGIKLGTFYKQAKQGGKD 201
>gi|145534097|ref|XP_001452793.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124420492|emb|CAK85396.1| unnamed protein product [Paramecium tetraurelia]
Length = 222
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 98/187 (52%), Positives = 133/187 (71%), Gaps = 1/187 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y +FK+IIIGDTGVGKS +LLQ + + HD TIGVEFG++++ ++G IKLQIWD
Sbjct: 3 NYSLMFKFIIIGDTGVGKSSILLQLIENEIREQHDATIGVEFGSKIIKVNGMNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSI RSYYR A GALLVYDIT + +F++L W+E+ + + N NM I+L GNK
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITNKNSFHNLQRWMEEIKNNGNANMVIVLCGNKI 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL RAV+ EEG Q+A+ L+FLE SA+ NV+ AF ++ +ILQ I + + +
Sbjct: 123 DLESERAVTYEEGWQYAQSQSLIFLEISAKQGINVQSAFYQSTQRILQEIDDQKI-MLGQ 181
Query: 182 QSGIKVG 188
GIK+G
Sbjct: 182 DPGIKIG 188
>gi|334261585|gb|AEG74033.1| Rab protein [Pellia endiviifolia (species B)]
Length = 217
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 139/211 (65%), Gaps = 5/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDSKLIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ + H + N+ +MLVGNK
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITRHVTFENVERWLKELKDHTDSNIVVMLVGNKSV 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS ++G+ F+++ GL F+E SA + NVE AF + +I + + + ALD D
Sbjct: 129 LRHLRAVSADDGQSFSEKEGLFFMETSALESTNVENAFKQIPTQIYRVVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPS--GARDGTVSQRGGCCS 211
S + G+GQ S D T +++ GCCS
Sbjct: 189 SAVP---GKGQTISVGNKDDVTATKKVGCCS 216
>gi|3024528|sp|Q39434.1|RB2BV_BETVU RecName: Full=Ras-related protein Rab2BV
gi|974778|emb|CAA89049.1| small G protein [Beta vulgaris subsp. vulgaris]
Length = 214
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 139/210 (66%), Gaps = 6/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS+E+G+ A++ GL FLE SA A N+E+AF +I I + AL A
Sbjct: 129 LKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEAS 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
S + GQG + D + +QR CCS
Sbjct: 189 SNLP-----GQGTTINVADASANQRRSCCS 213
>gi|302811619|ref|XP_002987498.1| rab family GTPase [Selaginella moellendorffii]
gi|300144652|gb|EFJ11334.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 141/209 (67%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ + H + N+ +MLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDVTRLATFENVERWLKELKDHTDSNIVVMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R VS E+G+ ++++ GL F+E SA + NVE +F + +I + + + ALD D
Sbjct: 129 LRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPSGARDG-TVSQRGGCC 210
S + G+GQ + ++D T +++ GCC
Sbjct: 189 SAVP---GKGQTINVSKDDVTATKKVGCC 214
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + +I + + + +++A +D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
G G+G+ + D + ++GGCCS
Sbjct: 191 GS---GPGKGEKINIKDDVSAVKKGGCCS 216
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NV+ AF + +I + + + A++ D+
Sbjct: 130 LRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLTQIYRIVSKKAME-TGDE 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G+ ++D + +R GCCS
Sbjct: 189 GAASAVPSKGEKIDVSKDVSAMKRVGCCS 217
>gi|148676697|gb|EDL08644.1| RAB14, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 218
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 96/141 (68%), Positives = 114/141 (80%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 74 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 133
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 134 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 193
Query: 122 DLAHRRAVSKEEGEQFAKENG 142
DL +R V+ EE +QFA+ENG
Sbjct: 194 DLEAQRDVTYEEAKQFAEENG 214
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + +I + + + +++A +D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
G G+G+ + D + ++GGCCS
Sbjct: 191 GS---GPGKGEKINIKDDVSAVKKGGCCS 216
>gi|401415413|ref|XP_003872202.1| putative ras-related protein rab-14 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322488425|emb|CBZ23671.1| putative ras-related protein rab-14 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 225
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 101/187 (54%), Positives = 134/187 (71%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS+ Y+FKYIIIGD VGKSCL+ FT++R++ TIGV+FG +V I+G +KLQ+W
Sbjct: 1 MSHKYIFKYIIIGDMSVGKSCLMHLFTEQRYRKDLPHTIGVDFGTTVVDINGELVKLQMW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FRS+TR YYRGAAGALLVYDI+RR T+ H+ +WL DAR + P +LVGNK
Sbjct: 61 DTAGQERFRSVTRGYYRGAAGALLVYDISRRSTYAHIGTWLTDARANTGPETVFILVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL R VS EE QFA E+ LLF+E S+ NVEE F+ TA +I + ++ G + V+
Sbjct: 121 SDLEEEREVSYEEAAQFAAEHNLLFVECSSLNGNNVEEVFLSTARRIHEKVKSGVMSPVD 180
Query: 181 DQSGIKV 187
+SG+++
Sbjct: 181 PESGVQL 187
>gi|19114579|ref|NP_593667.1| GTPase Ypt3 [Schizosaccharomyces pombe 972h-]
gi|141306|sp|P17610.1|YPT3_SCHPO RecName: Full=GTP-binding protein ypt3; AltName: Full=RAB
gi|5038|emb|CAA36946.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5152|emb|CAA36320.1| ypt3 [Schizosaccharomyces pombe]
gi|1122368|emb|CAA92383.1| GTPase Ypt3 [Schizosaccharomyces pombe]
Length = 214
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 133/208 (63%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL++FT F TIGVEF R + +D + IK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+HA+ N+ IMLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EE + FA EN L F+E SA A NVEEAF +I + + +L+A +D
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G P+ CC
Sbjct: 187 VHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>gi|302822293|ref|XP_002992805.1| rab family GTPase [Selaginella moellendorffii]
gi|300139353|gb|EFJ06095.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 141/209 (67%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSINVDGKLIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ + H + N+ +MLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDVTRLVTFENVERWLKELKDHTDSNIVVMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R VS E+G+ ++++ GL F+E SA + NVE +F + +I + + + ALD D
Sbjct: 129 LRHLRCVSTEDGQAYSEKEGLYFMETSALESVNVENSFKQILTQIYRVVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPSGARDG-TVSQRGGCC 210
S + G+GQ + ++D T +++ GCC
Sbjct: 189 SAVP---GKGQTINVSKDDVTATKKVGCC 214
>gi|405120692|gb|AFR95462.1| GTPase [Cryptococcus neoformans var. grubii H99]
Length = 213
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + +T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAVS +E +QFA ENGL F+E SA A NVE AF I + + +L++ D
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G P+ A DG CC
Sbjct: 186 VIKPSGGETILVAPT-ADDGGAKSSSKCC 213
>gi|303746|dbj|BAA02114.1| GTP-binding protein [Pisum sativum]
gi|738938|prf||2001457F GTP-binding protein
Length = 218
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + ID + IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA+ L F+E SA A NVE AF + ++I + + A++A
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFSEVLSQIYHIVSKKAVEAGESG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V GQ + D +V +R GCCS
Sbjct: 190 SSSAVP-SIGQTINVKEDSSVFKRFGCCS 217
>gi|170083919|ref|XP_001873183.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650735|gb|EDR14975.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 243
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 103/187 (55%), Positives = 130/187 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L KYIIIG+ G GKSCLL FT F+ TIGVEF +R V + + IKLQ+WD
Sbjct: 16 TYDFLMKYIIIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGA+LVYDIT R++F++LS WL DAR A+P++ +LVGNK
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDITNRDSFSNLSRWLADARALASPHLVAVLVGNKS 135
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V E ++A EN + FLEAS+ T +NVE F+ TA IL +I+ GALD
Sbjct: 136 DRDEEREVEWAEASKWAAENDVHFLEASSLTGENVEAPFLLTARAILLSIESGALDPEKA 195
Query: 182 QSGIKVG 188
SG+ G
Sbjct: 196 GSGVSYG 202
>gi|164662859|ref|XP_001732551.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
gi|159106454|gb|EDP45337.1| hypothetical protein MGL_0326 [Malassezia globosa CBS 7966]
Length = 213
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+G GKS LL +FT F TIGVEF R + +DG+ IK QIWD
Sbjct: 6 NYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLDSRSTIGVEFATRSINVDGKTIKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ ++S WL++ R HA+ N+ +MLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYVNVSRWLKELRDHADSNIVVMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA EN L F+E SA A NVE+AF +I + AL + +D
Sbjct: 126 DLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYHIVSNKALQSSDD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G PS DG +++GGCC
Sbjct: 186 VIKPSGGETISVQPS-TDDGGQTKKGGCC 213
>gi|71006264|ref|XP_757798.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
gi|46097199|gb|EAK82432.1| hypothetical protein UM01651.1 [Ustilago maydis 521]
Length = 213
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+G GKS LL +FT F TIGVEF R +++DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ ++S WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA EN L F+E SA A NVE+AF +I + + AL + +D
Sbjct: 126 DLRHLRAVPTEEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G PS A DG +++ GCC
Sbjct: 186 VIKPSGGETITVQPS-ADDGGQTKKNGCC 213
>gi|302901691|ref|XP_003048490.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256729423|gb|EEU42777.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 212
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDS 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S D S+ G CC
Sbjct: 185 AQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|443899278|dbj|GAC76609.1| M-phase inducer phosphatase [Pseudozyma antarctica T-34]
Length = 431
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+G GKS LL +FT F TIGVEF R +++DG+ +K QIWD
Sbjct: 224 NYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWD 283
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ ++S WL++ R HA+ N+ IMLVGNK
Sbjct: 284 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKS 343
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + FA EN L F+E SA A NVE+AF +I + + AL + +D
Sbjct: 344 DLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDD 403
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G PS A DG +++ GCC
Sbjct: 404 VIKPSGGETITVQPS-ADDGGATKKNGCC 431
>gi|357136444|ref|XP_003569814.1| PREDICTED: ras-related protein RIC2-like isoform 1 [Brachypodium
distachyon]
gi|357136446|ref|XP_003569815.1| PREDICTED: ras-related protein RIC2-like isoform 2 [Brachypodium
distachyon]
gi|357136448|ref|XP_003569816.1| PREDICTED: ras-related protein RIC2-like isoform 3 [Brachypodium
distachyon]
Length = 222
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK +IIGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 16 YDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDT 75
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF++++ WL++ R H +P++ +MLVGNK D
Sbjct: 76 AGQERYRAITSAYYRGAVGALLVYDVTRRSTFDNVARWLKELRDHTDPSIVVMLVGNKSD 135
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+++A+ L F+E SA A NV+ AF + +I Q +DA D
Sbjct: 136 LRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFAEVLTQIYQIASRKTVDAGEDG 195
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S +G+ + D + +R GCCS
Sbjct: 196 SAAP---SKGEKINVKDDVSALKRVGCCS 221
>gi|212275882|ref|NP_001130075.1| uncharacterized protein LOC100191168 [Zea mays]
gi|194688226|gb|ACF78197.1| unknown [Zea mays]
gi|195643758|gb|ACG41347.1| ras-related protein Rab11A [Zea mays]
gi|413932580|gb|AFW67131.1| Ras protein Rab11A [Zea mays]
Length = 215
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 106/215 (49%), Positives = 138/215 (64%), Gaps = 15/215 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + I+G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+++TF ++ WL + R HA+ N+ IM+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G+ A++ GL FLE SA A NVE+AF + I Q I + AL A
Sbjct: 129 LNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQE-- 186
Query: 183 SGIKVGYGRGQGPSG------ARDGTVSQRGGCCS 211
G GP G D + + +GGCCS
Sbjct: 187 -------AAGSGPPGQGTTINVADSSANMKGGCCS 214
>gi|440638900|gb|ELR08819.1| Ras-like protein Rab-11A [Geomyces destructans 20631-21]
Length = 212
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 136/208 (65%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA +NGL F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKQFASDNGLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S D ++ G CC
Sbjct: 185 AQANIGAGTNISLSKPADDGSAKGGKCC 212
>gi|340508515|gb|EGR34204.1| Ras-related protein Rab-2 [Ichthyophthirius multifiliis]
Length = 205
Score = 206 bits (523), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 96/188 (51%), Positives = 140/188 (74%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGD+ VGKS +LLQF + +F+ HD TIGVEFG++++ I + IKLQ+W
Sbjct: 1 MSYLYLFKYIIIGDSSVGKSAILLQFMENKFKKEHDTTIGVEFGSKIINIKNKNIKLQVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESF+SITRSYYRG+ A LVYDIT R++F ++++WL++ ++N ++I+L+GNK
Sbjct: 61 DTAGQESFKSITRSYYRGSICAFLVYDITNRQSFQNVANWLDEINNYSNEKITIILIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL + R V +EG+QFA + F+E SA+ +N+E F K+ +L I++G ++ N
Sbjct: 121 SDLGNNRQVQFQEGQQFADSFNIQFIETSAKQGENIELVFKKSTELVLNKIEKGEINPSN 180
Query: 181 DQSGIKVG 188
+ +G+KVG
Sbjct: 181 ESNGVKVG 188
>gi|326494958|dbj|BAJ85574.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 221
Score = 205 bits (522), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK +IIGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 15 YDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDT 74
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF++++ WL++ R H +P++ +MLVGNK D
Sbjct: 75 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDPSIVVMLVGNKSD 134
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+++A+ L F+E SA A NV+ AF + +I + +DA +D
Sbjct: 135 LRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDDG 194
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S +G+ + D + +R GCCS
Sbjct: 195 SSAP---SKGENINVKDDVSSLKRAGCCS 220
>gi|403163937|ref|XP_003324018.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375164677|gb|EFP79599.2| GTP-binding protein ypt3 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 214
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 131/209 (62%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYD+LFK ++IGD+GVGKS LL +FT F TIGVEF R +++DG+ IK QIWD
Sbjct: 6 SYDFLFKVVLIGDSGVGKSNLLSRFTRNEFNMDSKSTIGVEFATRSISVDGKTIKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI++ T+ ++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKHPTYVNVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA EN L F+E SA A NVE AF I + + AL++ D
Sbjct: 126 DLRHLRAVPTEEAQAFATENNLSFIETSAMDASNVETAFQNILTDIYRIVSSKALESSAD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G P+ S G CC
Sbjct: 186 AVGPTSGSTITVTPTSDDASKASGGGKCC 214
>gi|145528187|ref|XP_001449893.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833699|emb|CAI39327.1| rab_B60 [Paramecium tetraurelia]
gi|124417482|emb|CAK82496.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 141/211 (66%), Gaps = 8/211 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFK+IIIGDT VGKSC+L QF +++F+ H++T+GVEFGA+++ +DG+ IKLQIW
Sbjct: 1 MSYHYLFKFIIIGDTAVGKSCILYQFLEQKFRVKHEMTVGVEFGAKVLDLDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE+F+SITR YYR AAGA+LVYD+TRRE+F ++ W+++ + H +M I+LVGNK
Sbjct: 61 DTAGQETFKSITRQYYRSAAGAILVYDVTRRESFENVREWIKECQVHGTQDMVIVLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL + + G Q A E LLF+E SA+ N+ E F + A+++L+ +Q N
Sbjct: 121 VDLEKQYNIHNING-QLANEKNLLFIETSAKDNLNIIETFSQAASQVLKIVQR------N 173
Query: 181 DQSGIKVGYGRGQGPS-GARDGTVSQRGGCC 210
Q G G GQ + S GCC
Sbjct: 174 QQKGELPGVRVGQAINQTQLQQQSSTSNGCC 204
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R +T+D + IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+G+ FA+ F+E SA + NVE AF + ++I + + + ALD D
Sbjct: 129 LRHLRAVSIEDGKAFAERENTYFMETSALESTNVENAFTEVLSQIYRIVSKKALDVGEDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G+ D T ++ GCCS
Sbjct: 189 AAVP-SKGQTIHVGNKDDVTAMKKVGCCS 216
>gi|134111857|ref|XP_775464.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321259045|ref|XP_003194243.1| GTPase of the Ypt/Rab family [Cryptococcus gattii WM276]
gi|50258123|gb|EAL20817.1| hypothetical protein CNBE1790 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|317460714|gb|ADV22456.1| GTPase of the Ypt/Rab family involved in intra-Golgi traffic or the
budding of post-Golgi vesicles from the trans-Golgi,
putative; Ypt31p [Cryptococcus gattii WM276]
Length = 213
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 134/209 (64%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + +T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHQTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAVS +E +QFA ENGL F+E SA A NVE AF I + + +L++ D
Sbjct: 126 DLKHLRAVSTDEAKQFATENGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G P+ A DG CC
Sbjct: 186 VIKPSGGETILVAPT-ADDGGAKSGSKCC 213
>gi|449547142|gb|EMD38110.1| hypothetical protein CERSUDRAFT_113244 [Ceriporiopsis subvermispora
B]
Length = 220
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 142/198 (71%), Gaps = 13/198 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++TI + + +KLQ
Sbjct: 4 VAWHYVLKFIITGDAAVGKSSLLIRLTDQRFLNNPDPTLGVEFGSKLITIPEENKVVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T R++F + +WL D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTSRQSFLNARTWLADVREHADPHLTCILVG 123
Query: 119 NKCDLA--------HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 170
NK DL R V EEGE++AKE GLLF+EASA++ +NVE AF++ IL
Sbjct: 124 NKIDLCSDDGQPGRRPREVPTEEGERWAKEEGLLFVEASAKSGENVEAAFVQATRDILNK 183
Query: 171 IQEGALDAVNDQS-GIKV 187
I+ G D ND+S G+K+
Sbjct: 184 IKRGMFD--NDRSPGVKL 199
>gi|398408387|ref|XP_003855659.1| GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339475543|gb|EGP90635.1| GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 211
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 136/208 (65%), Gaps = 2/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++++T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKQQTYENVTRWLKELRDHADTNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS ++ +QFA ENGL F+E SA A NVE AF + A+I + + ALD
Sbjct: 126 LRHLRAVSTDDAKQFASENGLSFIETSALDASNVELAFQQELAEIYRIVSSKALDQGEPS 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G GPS S G CC
Sbjct: 186 QGPGQGSAIPLGPSNMPADKKS--GQCC 211
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 143/200 (71%), Gaps = 3/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK ++IGD+GVGK+C+L +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT +++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRNWIRNIEEHASADVEKMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ RRAVSKE+GEQ A E G+ F+E SA+ + NVEEAF+ T A+ +++ + +DA
Sbjct: 124 DMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFV-TLARDIKSKMDRKMDATGQ 182
Query: 182 QS--GIKVGYGRGQGPSGAR 199
Q G+KV Q SG +
Sbjct: 183 QKSGGVKVTEKESQKKSGWK 202
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R+ V ++FA G+ FLE SA++A NVE+AF+ AA+I + + GA ++
Sbjct: 125 LTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAAEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ + PS GGCC
Sbjct: 185 SNVKIQ-SKPVNPS---------PGGCC 202
>gi|388521711|gb|AFK48917.1| unknown [Lotus japonicus]
Length = 218
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H VS E+G+ FA++ L F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA-GDR 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +GQ + D +V R CCS
Sbjct: 189 ASTSVVPSQGQTINVNEDSSVLNRYRCCS 217
>gi|388504946|gb|AFK40539.1| unknown [Lotus japonicus]
Length = 218
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFVTKSLNIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H VS E+G+ FA++ L F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA-GDR 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +GQ + D +V R CCS
Sbjct: 189 ASTSVAPSQGQTINVNEDSSVLNRYRCCS 217
>gi|378734873|gb|EHY61332.1| Ras-like protein Rab-11B [Exophiala dermatitidis NIH/UT8656]
Length = 210
Score = 205 bits (522), Expect = 9e-51, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++R+T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKRQTYDNVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD+ +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDSGDAA 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G PSG D ++ CC
Sbjct: 186 QAPTGGVKIDMAPSGTPD---AKGNKCC 210
>gi|429848505|gb|ELA23977.1| ras GTPase [Colletotrichum gloeosporioides Nara gc5]
Length = 212
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S D + + G CC
Sbjct: 185 AQASIGTGPSIALSKPADDSAEKSGKCC 212
>gi|357452859|ref|XP_003596706.1| Ras-related protein Rab-11A [Medicago truncatula]
gi|355485754|gb|AES66957.1| Ras-related protein Rab-11A [Medicago truncatula]
Length = 218
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + +T+D + IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA+ L F+E SA A NVE AF + ++I + + + A++A
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V GQ + D +V +R GCCS
Sbjct: 190 SSSSVP-SVGQTINVKEDSSVLKRFGCCS 217
>gi|343428333|emb|CBQ71863.1| probable GTP-binding protein Rab11 [Sporisorium reilianum SRZ2]
gi|388852902|emb|CCF53350.1| probable probable GTP-binding protein Rab11 [Ustilago hordei]
Length = 213
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+G GKS LL +FT F TIGVEF R +++DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGTGKSNLLSRFTRNEFSLESKSTIGVEFATRSISVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ ++S WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHPTYVNVSRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + FA EN L F+E SA A NVE+AF +I + + AL + +D
Sbjct: 126 DLRHLRAVPTDEAKAFAAENNLSFIETSALDASNVEQAFQNILTEIYRIVSNKALQSSDD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G PS A DG +++ GCC
Sbjct: 186 VIKPSGGETITVQPS-ADDGGQTKKNGCC 213
>gi|359493755|ref|XP_003634661.1| PREDICTED: ras-related protein Rab11D isoform 2 [Vitis vinifera]
Length = 218
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ +A+ L F+E SA A NVE AF + +I + + + +++ ++
Sbjct: 130 LRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ + D + +R GCCS
Sbjct: 190 AASSVP-AKGERINVKDDASALKRVGCCS 217
>gi|406863148|gb|EKD16196.1| Ras GTPase [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 212
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + + ALD N +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALD--NGE 183
Query: 183 SG-IKVGYGRGQGPSGARDGTVSQRGGCC 210
S +G G S D ++ G CC
Sbjct: 184 SAQANIGAGTNISLSKPADDGAAKGGKCC 212
>gi|401880969|gb|EJT45277.1| hypothetical protein A1Q1_06346 [Trichosporon asahii var. asahii
CBS 2479]
gi|406697082|gb|EKD00350.1| hypothetical protein A1Q2_05319 [Trichosporon asahii var. asahii
CBS 8904]
Length = 213
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHSTYENVTRWLKELRDHADANIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAVS EE + FA E GL F+E SA A NVE AF I + + +L++ D
Sbjct: 126 DLKHLRAVSTEEAKAFATEQGLSFIETSALDASNVESAFQNILTDIYRIVSSKSLESSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G P+ A DG Q G CC
Sbjct: 186 VIKPSGGETILVTPT-ADDGGAKQGGKCC 213
>gi|225461703|ref|XP_002285495.1| PREDICTED: ras-related protein Rab11D isoform 1 [Vitis vinifera]
gi|147834751|emb|CAN75016.1| hypothetical protein VITISV_035368 [Vitis vinifera]
Length = 218
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ +A+ L F+E SA A NVE AF + +I + + + +++ ++
Sbjct: 130 LRHLVAVSTEDGKTYAERESLYFMETSALEATNVENAFAEVLTQIYRIVSKKSVEGGDEG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V +G+ + D + +R GCCS
Sbjct: 190 AASSVP-AKGERINVKDDASALKRVGCCS 217
>gi|350537783|ref|NP_001233798.1| Rab11 GTPase [Solanum lycopersicum]
gi|6688535|emb|CAB65172.1| Rab11 GTPase [Solanum lycopersicum]
Length = 218
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF +++ WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITIAYYRGAVGALLVYDVTRHVTFENVNRWLKELRDHTDPNIVVMLLGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS EE + A+ L F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVAVSTEEAKSLAEREALYFMETSALEATNVENAFTEALTQIYRIVSKKAVEA-GDE 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+GQ + +G+ ++ GCCS
Sbjct: 189 GATSTAPPKGQTINIKDEGSAWKKFGCCS 217
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA++A NVE+AF+ AA+I + + GA N++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATTGGNEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ + S GGCC
Sbjct: 185 SNVKIQSTPVKPAS----------GGCC 202
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 139/208 (66%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA ++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGGEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ G PS GGCC
Sbjct: 185 PNVKLTPGTTVKPSS---------GGCC 203
>gi|392567240|gb|EIW60415.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 225
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 109/227 (48%), Positives = 146/227 (64%), Gaps = 21/227 (9%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+ + Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++TI + + +KLQ
Sbjct: 4 VQWHYVLKFIITGDAAVGKSSLLVRLTDQRFLANPDPTLGVEFGSKLITIPEENKIVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T R++F + SWL D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTSRQSFVNARSWLADVREHADPHLTCILVG 123
Query: 119 NKCDLA-------------HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAA 165
NK DL +R VS EE E +AKE LLF+EASA++ +NVE AF +
Sbjct: 124 NKLDLCSDESSDGAAAGGKRKREVSVEEAELWAKEENLLFVEASAKSGENVEAAFERATR 183
Query: 166 KILQNIQEGALDAVNDQS-GIKVGYGRGQGPSGARDGTVSQRGGCCS 211
IL + G D +D+S G+K+ G SG R GCCS
Sbjct: 184 DILSKVHRGVFD--DDRSPGVKLSKPSG---SGVALEDAQARTGCCS 225
>gi|307176411|gb|EFN65985.1| Ras-related protein Rab-2A [Camponotus floridanus]
Length = 168
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/142 (72%), Positives = 121/142 (85%)
Query: 47 MVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQ 106
M+TID + IKLQIWDTAGQE+FRSITRSYYRGAAGALLVYDITRRETFNHL++WLEDARQ
Sbjct: 1 MITIDSKQIKLQIWDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTTWLEDARQ 60
Query: 107 HANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAK 166
H+N NM IML+GNK DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +
Sbjct: 61 HSNSNMVIMLIGNKSDLDSRREVRREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKE 120
Query: 167 ILQNIQEGALDAVNDQSGIKVG 188
I + IQEG D N+ +GIK+G
Sbjct: 121 IYEKIQEGVFDINNEANGIKIG 142
>gi|330923009|ref|XP_003300061.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|311325975|gb|EFQ91841.1| hypothetical protein PTT_11209 [Pyrenophora teres f. teres 0-1]
gi|451845858|gb|EMD59169.1| hypothetical protein COCSADRAFT_164753 [Cochliobolus sativus
ND90Pr]
Length = 211
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 105/217 (48%), Positives = 133/217 (61%), Gaps = 20/217 (9%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ---- 181
Query: 183 SGIKVGYGRGQGPSGARDGTV---------SQRGGCC 210
G G GP D V Q+ GCC
Sbjct: 182 -------GEGSGPVLGNDRKVLEISKSADAEQKKGCC 211
>gi|3024529|sp|Q40195.1|RB11E_LOTJA RecName: Full=Ras-related protein Rab11E
gi|1370150|emb|CAA98181.1| RAB11E [Lotus japonicus]
Length = 218
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H VS E+G+ FA++ L F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA-GDR 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V +GQ + D +V R CCS
Sbjct: 189 PSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
>gi|449300707|gb|EMC96719.1| hypothetical protein BAUCODRAFT_487092 [Baudoinia compniacensis
UAMH 10762]
Length = 212
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDTKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADNNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE ++FA +NGL F+E SA A NVE AF +I + + A++
Sbjct: 126 LRHLRAVPTEEAKEFASQNGLSFIETSALDASNVELAFQNELTEIYRIVSSKAIEQGEPS 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G GPS G S++G CC
Sbjct: 186 QGPGQGTSIPLGPSHP-PGDASKKGQCC 212
>gi|310798039|gb|EFQ32932.1| Ras family protein [Glomerella graminicola M1.001]
Length = 212
Score = 204 bits (520), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+G G G + D + + G CC
Sbjct: 185 PQATIGAGPGISLTKPADDSAEKSGKCC 212
>gi|145483299|ref|XP_001427672.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834347|emb|CAI44522.1| rab_B56 [Paramecium tetraurelia]
gi|124394754|emb|CAK60274.1| unnamed protein product [Paramecium tetraurelia]
Length = 209
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YLFK+II+G++ VGKSCLLLQ+T+ RF+ +D TIGVE+G++ D + IKLQ+WD
Sbjct: 3 NYHYLFKFIIVGESTVGKSCLLLQYTEGRFRVGYDTTIGVEYGSKEFIYDDKLIKLQLWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQESFRSITR+YYRG+ G LVYDI+RR TF+ + +W++D +Q N + LVGNKC
Sbjct: 63 TAGQESFRSITRAYYRGSIGCFLVYDISRRITFDRIQTWVKDVQQDTNNQIEYFLVGNKC 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R+ VS +EG Q + + G F E SA+T +NVE F KI +NI+ +D ++
Sbjct: 123 DLKDRK-VSYDEGRQLSIQLGCEFQETSAKTGENVEFIFETLTKKIYENIKSNKIDPLDP 181
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
GIK+G R + +R CC
Sbjct: 182 NHGIKIGKIR-ENERVTEIPNQKKRSVCC 209
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NV+ AF + +I + + A++ D
Sbjct: 130 LRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAME-TGDN 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ +D + +R GCCS
Sbjct: 189 AAASAVPSKGEKIDVNKDVSAKKRVGCCS 217
>gi|358381001|gb|EHK18677.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV +E + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTDEAKGFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S A D S+ G CC
Sbjct: 185 AQATIGAGTNISLSKAADDEASKGGKCC 212
>gi|400598893|gb|EJP66600.1| Ras family protein [Beauveria bassiana ARSEF 2860]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S D S+ G CC
Sbjct: 185 AQATIGAGTNISLSKPADDDASKGGKCC 212
>gi|322707693|gb|EFY99271.1| Ras GTPase Rab11, putative [Metarhizium anisopliae ARSEF 23]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKSFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S D ++ G CC
Sbjct: 185 AQATIGAGTNISLSKPADDESAKSGKCC 212
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 142/208 (68%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLEASA++A NVE+AF+ AA+I + + GA +++
Sbjct: 125 LTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGGSEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ + S GGCC
Sbjct: 185 SNVKIQSTPVKTSS----------GGCC 202
>gi|452846261|gb|EME48194.1| hypothetical protein DOTSEDRAFT_69969 [Dothistroma septosporum
NZE10]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 133/208 (63%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHNTYENVTRWLKELRDHADTNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA ENGL F+E SA A NVE AF +I + + ALD
Sbjct: 126 LRHLRAVPTEEAKQFASENGLSFIETSALDASNVELAFQNELTEIYRIVSSKALDQGEQT 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+G G S G +++G CC
Sbjct: 186 AGPSQGSAIPLS-SSTPPGDATKKGQCC 212
>gi|452986440|gb|EME86196.1| hypothetical protein MYCFIDRAFT_72266 [Pseudocercospora fijiensis
CIRAD86]
Length = 211
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 135/208 (64%), Gaps = 2/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +TF ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKEQTFGNVQRWLKELRDHADTNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV ++ + FA ENGL F+E SA A NVE AF + +I + + ALD D
Sbjct: 126 LRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALD--QDT 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
SG G G S + +++G CC
Sbjct: 184 SGPAPGQGTSIPLSASTPAGEAKKGQCC 211
>gi|443734856|gb|ELU18712.1| hypothetical protein CAPTEDRAFT_6646 [Capitella teleta]
Length = 214
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 140/210 (66%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID-GRPIKLQIWD 61
+DY F+ I+IGD+ VGKS LL FTD +F + D T+GV+F AR+V + G +KLQ+WD
Sbjct: 6 FDYQFRLILIGDSTVGKSSLLKYFTDGKFSEMCDPTVGVDFYARLVGVKPGVRVKLQLWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSI-MLVGNK 120
TAGQE FRSITRSYYR + GALL+YDIT+R +F HL WLE+A+ H P+ ++ M+VG+K
Sbjct: 66 TAGQERFRSITRSYYRNSVGALLIYDITKRRSFEHLEDWLEEAKIHIEPHKAVYMVVGHK 125
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D RAVS +EG+ FA+ +GL F+E SA + QNVEEAF I Q +++G L +
Sbjct: 126 ADRDQERAVSTKEGKNFAEFHGLRFIETSAVSGQNVEEAFQLITKDIYQMLEKGLLKIED 185
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
D GIK GY + + +G GCC
Sbjct: 186 DWDGIKTGYAQPKETFTLEEGE-PHEAGCC 214
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS E G+ A E G+ FLE SA+ A NVE+AF+ AA+I + +
Sbjct: 125 LAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAANASKP 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ V+Q+ GCCS
Sbjct: 185 ATVQM---RGQ--------PVAQQNGCCS 202
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS E G+ A E G+ FLE SA+ A NVE+AF+ AA+I + +
Sbjct: 125 LAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAGNASKP 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ V+Q+ GCCS
Sbjct: 185 ATVQM---RGQ--------PVAQQNGCCS 202
>gi|388493146|gb|AFK34639.1| unknown [Medicago truncatula]
Length = 218
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + +T+D + IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLTVDAKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA+ L F+E SA A NVE AF + ++I + + + A++A
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLSQIYRIVSKKAVEAGEGG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V GQ + D +V +R GCCS
Sbjct: 190 SSSSVP-SVGQTINVKEDFSVLKRFGCCS 217
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ FA+ L F+E SA A NV+ AF + +I + + A++ D
Sbjct: 130 LRHLVAVSTEDGKSFAERESLYFMETSALEATNVDNAFAEVLNQIYSIVSKKAME-TGDN 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ +D + +R GCCS
Sbjct: 189 AAASAVPSKGEKIDVNKDVSAMKRVGCCS 217
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+LFLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|358396186|gb|EHK45567.1| secretion-related small GTPase [Trichoderma atroviride IMI 206040]
Length = 212
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV +E + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTDEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +G G S A D ++ G CC
Sbjct: 185 AQATIGAGTNISLSKAADDEAAKGGKCC 212
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA++A NVEEAF+ AA+I + A +N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRM---ATQPMNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVNI-RGQ--------PVNQKSGCCS 201
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS E G+ FA E G+ FLE SA+ A NVE+AF+ AA+I + + A+N
Sbjct: 125 LAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRM--ASQPAMNAS 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ CCS
Sbjct: 183 RPATVQM-RGQ--------PVTQKSSCCS 202
>gi|380492729|emb|CCF34399.1| Ras-like protein Rab-11B [Colletotrichum higginsianum]
Length = 212
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+G G G + D + + G CC
Sbjct: 185 PQATIGAGPGISLTKPADDSAEKGGKCC 212
>gi|393220787|gb|EJD06273.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 215
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 106/216 (49%), Positives = 134/216 (62%), Gaps = 14/216 (6%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
+SYDYLFK ++IGD+GVGKS LL +FT F TIGVEF R V +DG+ +K QIW
Sbjct: 7 VSYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRTVQVDGKTVKAQIW 66
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE +R+IT +YYRGA GALLVYDI ++ TF+++ WL++ R HA+ N+ IMLVGNK
Sbjct: 67 DTAGQERYRAITSAYYRGAVGALLVYDIAKQSTFDNVQRWLKELRDHADSNIVIMLVGNK 126
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL H RAV + + FA+EN L F+E SA A NVE AF I + + ALD
Sbjct: 127 SDLKHLRAVLTDVAQSFAEENNLSFMETSALDASNVEAAFQSILTDIYRIVSAKALDQ-- 184
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS-----QRGGCCS 211
G G P TVS + GGCC+
Sbjct: 185 -------NQGPGLTPGPRETITVSKSEEKKNGGCCA 213
>gi|170094506|ref|XP_001878474.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646928|gb|EDR11173.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 211
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/214 (48%), Positives = 137/214 (64%), Gaps = 13/214 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV+ +E + F+ ENGL F+E SA A NVE AF I + + +L++ +
Sbjct: 126 DLKHLRAVTTDEAKAFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLESSTN 185
Query: 182 -----QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GI V GPS D T +Q CC
Sbjct: 186 NIEPPKEGISV------GPS--LDSTATQGSKCC 211
>gi|116781881|gb|ABK22282.1| unknown [Picea sitchensis]
Length = 219
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/215 (46%), Positives = 137/215 (63%), Gaps = 12/215 (5%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGKS +L +F F TIGVEF R V I+ + +K QIWDTA
Sbjct: 8 DYVFKVVLIGDSAVGKSQILSRFARDEFSLDSKATIGVEFQTRTVVIEHKSVKAQIWDTA 67
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYDIT+R+TF+H+ WLE+ R HA+ N+ IMLVGNKCDL
Sbjct: 68 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVPRWLEELRNHADNNIVIMLVGNKCDL 127
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
+ RAV E+ ++FA++ GL FLE SA A NVE AF+ +I + + + +L A DQ
Sbjct: 128 DNLRAVPTEDAKEFAQKEGLFFLETSAMEATNVETAFLTVLTEIFKIVSKKSLIASQDQ- 186
Query: 184 GIKVGYGRGQGPSGA-------RDGTVSQRGGCCS 211
G G SG T +++ CC+
Sbjct: 187 ----GNGNHASLSGTSIVVPGQEQDTTTKKKSCCT 217
>gi|388491774|gb|AFK33953.1| unknown [Medicago truncatula]
Length = 215
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 142/210 (67%), Gaps = 5/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF++++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVNRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS+++G+ A++ GL FLE SA A N+E+AF +I + + AL A +
Sbjct: 129 LNHLRAVSEDDGQALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKAL-AAQEA 187
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+G + GQG + D + + + GCCS
Sbjct: 188 AGTSLP---GQGTTINVADSSANTKRGCCS 214
>gi|389748791|gb|EIM89968.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 212
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
++DYLFK ++IGD+GVGKS LL +FT F TIGVEF R +++DG+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRTISVDGKTLKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + F+ ENGL F+E SA A NVE AF I + + +L+ D
Sbjct: 126 DLKHLRAVPTEEAKAFSAENGLSFIETSALDASNVESAFQTILTDIFRIVSNKSLEPSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK G S + D + +Q CC
Sbjct: 186 --AIKPSSGDTLTVSPSVDTSNAQASKCC 212
>gi|392578447|gb|EIW71575.1| hypothetical protein TREMEDRAFT_27581 [Tremella mesenterica DSM
1558]
Length = 240
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 99/187 (52%), Positives = 128/187 (68%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK+I+IG+ G GKSCLL + F+ TIGVEF +R + I + IKLQ+WD
Sbjct: 12 AYDYLFKFIVIGEAGTGKSCLLYHCIHETFKEHSAHTIGVEFSSRTLRIGDKNIKLQLWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT R++F +LS WL D R A+P++ ++LVGNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDITSRQSFANLSRWLTDCRALASPHLVVVLVGNKL 131
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V EG ++A+ENGLLF+E S+ T +NV F+ A IL +I G LD
Sbjct: 132 DKEEDREVEYVEGSRWAQENGLLFVEVSSLTGENVTTPFLLAARSILSSIDSGVLDPDTP 191
Query: 182 QSGIKVG 188
+G+ G
Sbjct: 192 NTGVSYG 198
>gi|345568396|gb|EGX51290.1| hypothetical protein AOL_s00054g360 [Arthrobotrys oligospora ATCC
24927]
Length = 210
Score = 203 bits (516), Expect = 4e-50, Method: Compositional matrix adjust.
Identities = 100/190 (52%), Positives = 135/190 (71%), Gaps = 3/190 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID-GRPIKLQIWD 61
+DY+ K I +GD+G GKS L ++ + RF D+TIGVE +R+V +D G+ IKLQIWD
Sbjct: 5 WDYIAKVICLGDSGTGKSSLTVRLCEGRFNKT-DVTIGVELDSRVVDVDDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +RS+T SY R A GALLVYDITR++T +H+ WL D R P++SI+LVGNKC
Sbjct: 64 TAGQEQYRSVTNSYIRNATGALLVYDITRKDTLSHVQRWLSDLRNLGEPHISIVLVGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLF-LEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DLA RR VS EE +AKENG+ F +E SA+T ++VE AF++ A +I +NI++G D
Sbjct: 124 DLADRRQVSTEEAAAWAKENGINFHVETSAKTGESVERAFVEVAQEIYRNIRDGVYDPRG 183
Query: 181 DQSGIKVGYG 190
+G+KV G
Sbjct: 184 KNTGLKVKLG 193
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA++A NVE+AF+ AA+I + + GA ++
Sbjct: 125 LTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAAEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ P + GGCC
Sbjct: 185 SNVKI----QSKPVN------TSSGGCC 202
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+++ NVE+AF+ AA+I + + GA +++
Sbjct: 125 LTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGASEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ P + GGCC
Sbjct: 185 SNVKI----QSKPVN------TSSGGCC 202
>gi|388517625|gb|AFK46874.1| unknown [Lotus japonicus]
Length = 216
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 140/210 (66%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK I+IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIILIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS+++G A+++GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LNHLRAVSEDDGGALAEKDGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAT 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+G V GQG + D + + + GCCS
Sbjct: 189 AGASVP---GQGTTINVADTSGNTKKGCCS 215
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 138/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS E + FA E G+ F+E SA+ A NVE+AF+ AA I + A N+
Sbjct: 125 LEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRM---ASQPANNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+GGCCS
Sbjct: 182 RPPTVQI-RGQ--------PVAQKGGCCS 201
>gi|390598604|gb|EIN08002.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 213
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 135/210 (64%), Gaps = 3/210 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + F+ ENGL F+E SA A NVE AF I + + +L+ D
Sbjct: 126 DLKHLRAVPTEEAKTFSTENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGG-CC 210
IK G S + D + + +GG CC
Sbjct: 186 P--IKPPTGDTLTVSPSVDNSANAQGGKCC 213
>gi|402225755|gb|EJU05816.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 213
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 129/180 (71%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F P TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNPDSKSTIGVEFATRSLEVDGKVVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI+++ TF +++ WL++ R HA+ ++ +MLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDISKQPTFANVARWLKELRDHADSSIVVMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E +QFA +NGL F+E SA A NVE AF + I + + +LDA ++
Sbjct: 126 DLKHLRAVLTDEAKQFAMDNGLSFIETSALDASNVEAAFQQILTDIYRIVSSKSLDAADE 185
>gi|390598603|gb|EIN08001.1| GTPase [Punctularia strigosozonata HHB-11173 SS5]
Length = 213
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 132/209 (63%), Gaps = 1/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTIKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDIT+ ++ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDITKHGSYTNVTRWLKELRDHADANIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + F+ ENGL F+E SA A NVE AF T I + + L+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDATNVESAFQTTLTDIYRIVSRQTLEQNAD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G R PS + + G CC
Sbjct: 186 PIKPPTGDTRTINPS-VDNSASAPSGKCC 213
>gi|58268126|ref|XP_571219.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|134112017|ref|XP_775544.1| hypothetical protein CNBE2580 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258203|gb|EAL20897.1| hypothetical protein CNBE2580 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57227453|gb|AAW43912.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 240
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 101/192 (52%), Positives = 131/192 (68%), Gaps = 2/192 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK+I+IG+ G GKSCLL Q ++F+ TIGVEF ++ + I + IKLQ+WD
Sbjct: 11 AYDYLFKFIVIGEAGTGKSCLLYQCIHEQFKENSSHTIGVEFSSKTLRIGDKNIKLQLWD 70
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGA+LVYDIT R++F +LS WL D R A+P++ ++LVGNK
Sbjct: 71 TAGQERFRSVTRSYYRGAAGAILVYDITSRQSFVNLSRWLTDCRALASPHLVVVLVGNKL 130
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V EG ++A+ENGLLF+E S+ T +NV F+ IL I G LD D
Sbjct: 131 DKEEDREVEYTEGSRWAQENGLLFVEVSSLTGKNVSTPFLLAGRTILSAIDAGTLDP--D 188
Query: 182 QSGIKVGYGRGQ 193
+G V YG Q
Sbjct: 189 SAGSGVSYGERQ 200
>gi|443899364|dbj|GAC76695.1| GTPase Rab4 [Pseudozyma antarctica T-34]
Length = 246
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K+IIIG+ G GKSCLL F +F+ TIGVEF +R++ I + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT+R TF LS WL DAR A+P++ ++LVGNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDITKRSTFEPLSRWLTDARALASPDLVVVLVGNKT 131
Query: 122 DLA-HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D R V E ++A ENG+LFLE S+ T +NVE F A IL I+ G LD
Sbjct: 132 DRGDDEREVGYLEASKWANENGVLFLETSSMTGENVEAPFALAARSILLAIESGKLDPEK 191
Query: 181 DQSGIKVG 188
SGI G
Sbjct: 192 AGSGISYG 199
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 139/209 (66%), Gaps = 14/209 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYLFK ++IGD+GVGK+C+L +F+D F TIG++F + + + G+ IKLQIWD
Sbjct: 5 SYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE F +IT SYYRGA G +LVYDIT+ +TF+++S WL + +HAN ++ M++GNKC
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKWLRNIEEHANEDVEKMILGNKC 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ RR VS+E GEQ A+E+G+ FLE SA+T N+E+AF A IL+ +E D+
Sbjct: 125 DMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILK--KELNKDSEEP 182
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ I V + ++GGCC
Sbjct: 183 SNNIHVHDQK------------DKKGGCC 199
>gi|14275884|dbj|BAB58888.1| rab-like protein B [Giardia intestinalis]
Length = 205
Score = 202 bits (514), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 101/182 (55%), Positives = 132/182 (72%), Gaps = 13/182 (7%)
Query: 20 SCLLLQFTDKRFQPVHDLTIGVEFGARMVTI---DG--RPIKLQIWDTAGQESFRSITRS 74
SCLLL+F +++F P+HD+T+GVEF + + + DG + +K+QIWDTAGQE FRSITRS
Sbjct: 1 SCLLLRFVEQKFIPLHDVTVGVEFCNKTLQVPSKDGSEKTVKVQIWDTAGQEQFRSITRS 60
Query: 75 YYRGAAGALLVYDITRRETFNHLSSWLEDAR----QHANPN----MSIMLVGNKCDLAHR 126
YYRGAAGALLVYD+T R +F L WL+D A+PN M IMLVGNK DL H+
Sbjct: 61 YYRGAAGALLVYDVTNRSSFEALEGWLKDMLAGVGMEASPNGVSGMVIMLVGNKTDLEHK 120
Query: 127 RAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIK 186
R VSKEEGEQFA+++GLLF+E SA+ NV E+F +TA IL+ ++ G +D V+ SG+K
Sbjct: 121 RKVSKEEGEQFARDHGLLFIETSAKDDLNVSESFNETARTILEKVETGEIDCVSKDSGVK 180
Query: 187 VG 188
G
Sbjct: 181 AG 182
>gi|74834303|emb|CAI44510.1| rab_C21 [Paramecium tetraurelia]
Length = 234
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 98/192 (51%), Positives = 132/192 (68%), Gaps = 3/192 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y YL K+IIIGDT VGKSCLLLQFTD RF+ HD TIGVEFG+R I+ + IKLQ+WD
Sbjct: 3 NYHYLLKFIIIGDTCVGKSCLLLQFTDSRFRNEHDATIGVEFGSRNTKINDKTIKLQVWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+F+SITRSYYRG+ G +LV+D+T R++F ++ W ++ + +A + + LV NK
Sbjct: 63 TAGQEAFKSITRSYYRGSIGGILVFDVTSRQSFEGVAKWYQEIQGYACDKIEMALVANKI 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V EE + FAK++G + E SA+T +NV+ F A IL+ I G +D +
Sbjct: 123 DLDAKREVQTEEAQAFAKKHGFAYFETSAKTGENVDTVFESMAQTILKRIDSGEIDPSQE 182
Query: 182 Q---SGIKVGYG 190
GIKVG G
Sbjct: 183 VLFIYGIKVGPG 194
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A VN+
Sbjct: 125 LTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM---ASQPVNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKAGCCS 201
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 143/210 (68%), Gaps = 12/210 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI-QEGALDAVND 181
LA ++ V + FA E G+ FLE SA+ A NVE+AF+ AA+I + + AL + +
Sbjct: 125 LASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSSTSR 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ T+ +GGCCS
Sbjct: 185 PNNVQL---RGQ--------TILPKGGCCS 203
>gi|326435207|gb|EGD80777.1| tubulovesicle-associated protein [Salpingoeca sp. ATCC 50818]
Length = 214
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 104/214 (48%), Positives = 134/214 (62%), Gaps = 16/214 (7%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 7 YDFLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + ++ ++S WL++ R HA+ N+ IMLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKHASYENVSRWLKELRDHADSNIVIMLVGNKSD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV KEE +FA+EN L F+E SA + NVEEAF I + + Q
Sbjct: 127 LKHLRAVPKEEATKFAEENSLSFIETSALDSTNVEEAFKNILTSIYRLVS---------Q 177
Query: 183 SGIKVGYGRGQGPS-----GARDGTVSQ--RGGC 209
IK G PS G D + ++ +GGC
Sbjct: 178 RSIKAGESDKTTPSDTIVVGPTDSSTTETSKGGC 211
>gi|302415737|ref|XP_003005700.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|261355116|gb|EEY17544.1| GTP-binding protein ypt3 [Verticillium albo-atrum VaMs.102]
gi|346973752|gb|EGY17204.1| GTP-binding protein ypt3 [Verticillium dahliae VdLs.17]
Length = 212
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 132/208 (63%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ + G S D + G CC
Sbjct: 185 AQANIAAGTSLSLSKPADENADKGGKCC 212
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + S GGCC
Sbjct: 188 SNVNI----------QSTPVKSSSGGCC 205
>gi|357158024|ref|XP_003577992.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA A NVE AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKAFAERESTFFMETSALEAMNVESAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 189 AAPPRGQTINVG--GKDDVSAVKKAGCCS 215
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 141/210 (67%), Gaps = 11/210 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI-QEGALDAVND 181
LA ++ V E + FA E G+ FLE SA+ A NVE+AF+ AA+I + + AL + +
Sbjct: 125 LASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSSTSK 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V RGQ + Q+ GCCS
Sbjct: 185 PNN--VTNLRGQA--------IPQKSGCCS 204
>gi|299109315|emb|CBH32505.1| ras-related protein, expressed [Triticum aestivum]
Length = 221
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK +IIGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 15 YDYLFKAVIIGDSGVGKSNLLSRFTKNEFCLESKSTIGVEFATRSLQVDGKVVKAQIWDT 74
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF++++ WL++ R H + ++ +MLVGNK D
Sbjct: 75 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVARWLKELRDHTDSSIVVMLVGNKSD 134
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+++A+ L F+E SA A NV+ AF + +I + +DA +D
Sbjct: 135 LRHLVAVSTEDGQEYAEAESLYFMETSALDATNVDNAFSEVLTQIYRIASRKTVDAGDDG 194
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S +G+ + D + +R GCCS
Sbjct: 195 SSAP---SKGENINVKDDVSSLKRAGCCS 220
>gi|302691566|ref|XP_003035462.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
gi|300109158|gb|EFJ00560.1| hypothetical protein SCHCODRAFT_66290 [Schizophyllum commune H4-8]
Length = 212
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R +T++G+ +K QIWD
Sbjct: 6 NYDYLFKIVLIGDSGVGKSNLLSRFTRNEFSQDTKSTIGVEFATRSITVEGKILKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI++R ++ ++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKRGSYENVQRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E FA ENGL F+E SA A NV+ AF I + + L++ +
Sbjct: 126 DLKHLRAVPTDEARAFAAENGLSFIETSALDASNVDSAFETNLTDIYRIVSSRTLESSAN 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G GPS D Q GCC
Sbjct: 186 PIEAPSGNTVSVGPS--LDSNAKQSNGCC 212
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A VN+
Sbjct: 125 LTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM---ASQPVNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKSGCCS 201
>gi|297850098|ref|XP_002892930.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
gi|297338772|gb|EFH69189.1| hypothetical protein ARALYDRAFT_471894 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 202 bits (513), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF ++ WL++ + H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ +A++ L F+E SA A NVE+AF + +I + + ++A D
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ D + ++ GCCS
Sbjct: 190 NA---SVPKGEKIEVKNDVSALKKLGCCS 215
>gi|351722287|ref|NP_001235959.1| GTP-binding protein [Glycine max]
gi|22597170|gb|AAN03472.1| GTP-binding protein [Glycine max]
Length = 217
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLDVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR+ TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRQATFENVDRWLKELRNHTDANIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ +A++ L F+E SA A NVE AF + +I + + A++ +
Sbjct: 130 LRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKAVEVA--E 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G +G+ D + +R GCCS
Sbjct: 188 NGTTSVPAKGEKIDLKNDVSALKRVGCCS 216
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 10/209 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEINRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RR VS + G+ FA G+ FLE SA+ A NVEEAF+ A++I + +
Sbjct: 125 LTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPALNTGKS 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ VG G P + + GCCS
Sbjct: 185 GTVNVG---GSQP-------IPPKTGCCS 203
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + S GGCC
Sbjct: 188 SNVNI----------QSTPVKSSSGGCC 205
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVEEAF+ AA I + + A N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRM--ASQPAANNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 183 RPPTVQI-RGQ--------PVNQKSGCCS 202
>gi|425771377|gb|EKV09822.1| GTP-binding protein yptV1 [Penicillium digitatum Pd1]
gi|425776994|gb|EKV15191.1| GTP-binding protein yptV1 [Penicillium digitatum PHI26]
Length = 209
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 135/208 (64%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD N +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD--NGE 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G +V R +D Q+ GCC
Sbjct: 184 GGQQVLDRRPVIDPSKQDS--EQKPGCC 209
>gi|396477566|ref|XP_003840300.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
gi|312216872|emb|CBX96821.1| similar to ras-related protein Rab-11B [Leptosphaeria maculans JN3]
Length = 211
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 133/208 (63%), Gaps = 2/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQGEGS 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ G + S + D Q+ GCC
Sbjct: 186 QNVLGGERKVLEISKSADA--EQKKGCC 211
>gi|255950668|ref|XP_002566101.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211593118|emb|CAP99494.1| Pc22g22060 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 209
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 135/208 (64%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD N +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD--NGE 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G +V R +D Q+ GCC
Sbjct: 184 GGQQVLDRRPVIDPSKQDS--EQKQGCC 209
>gi|449015743|dbj|BAM79145.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 224
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 108/217 (49%), Positives = 137/217 (63%), Gaps = 9/217 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R V DG+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVQTDGKVIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++R +F + WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDISKRSSFENAERWLKELRDHADQNIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKIL-----QNIQEGALD 177
L H RAV+ EEG+Q+A GL F+E SA A +VEEAF++ I +++ G
Sbjct: 129 LKHLRAVTTEEGQQYADARGLSFIETSALDASHVEEAFVRILTDIYRLVHKRHLASGDPT 188
Query: 178 AVNDQSGIKVGYGRGQGPSG---ARDGTVSQRGGCCS 211
SG GRG+ S + D S+R CCS
Sbjct: 189 VAKSASGAVYQAGRGETISVGNLSHDNRSSKR-KCCS 224
>gi|336367509|gb|EGN95854.1| hypothetical protein SERLA73DRAFT_142810 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380217|gb|EGO21371.1| hypothetical protein SERLADRAFT_399071 [Serpula lacrymans var.
lacrymans S7.9]
Length = 220
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 109/222 (49%), Positives = 146/222 (65%), Gaps = 16/222 (7%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++ I +G+ +KLQ
Sbjct: 4 ITWHYVLKFIITGDAAVGKSSLLVRLTDQRFLTNPDPTLGVEFGSKLIEIPEEGKIVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T R +F + SWL D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTSRASFTNARSWLADVREHADPHLTCILVG 123
Query: 119 NKCDLAH--------RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 170
NK DL RR VS EGE +AKE+ LLF+EASA++ NVE AF + + IL
Sbjct: 124 NKVDLCEAEDGTSNGRREVSTAEGELWAKEDDLLFVEASAKSGVNVEIAFEQASRDILDK 183
Query: 171 IQEGALDAVNDQS-GIKVGYGRGQGPSGARDGTVSQRGGCCS 211
I+ G D +D+S G+K+ S S R CCS
Sbjct: 184 IKRGVFD--DDRSPGVKLSK---PANSNLNIDQGSTRPTCCS 220
>gi|71006432|ref|XP_757882.1| hypothetical protein UM01735.1 [Ustilago maydis 521]
gi|46097318|gb|EAK82551.1| hypothetical protein UM01735.1 [Ustilago maydis 521]
Length = 246
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 101/188 (53%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K+IIIG+ G GKSCLL F +F+ TIGVEF +R++ I + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKEQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT+R TF LS WL DAR A+P++ ++LVGNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDITKRSTFEPLSRWLTDARALASPDLVVVLVGNKT 131
Query: 122 DLA-HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D R V E ++A ENG+LFLE S+ T +NVE F A IL I+ G LD
Sbjct: 132 DRGDDEREVGYLEASKWANENGVLFLETSSITGENVEAPFALAARSILLAIESGKLDPEK 191
Query: 181 DQSGIKVG 188
SG+ G
Sbjct: 192 TGSGVSYG 199
>gi|326497829|dbj|BAJ94777.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326501616|dbj|BAK02597.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA A NVE AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKAFAERESTFFMETSALEAMNVENAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 189 AAPPRGQTINVG--GKDDVSAVKKAGCCS 215
>gi|219362849|ref|NP_001136551.1| uncharacterized protein LOC100216670 [Zea mays]
gi|194696142|gb|ACF82155.1| unknown [Zea mays]
gi|224033377|gb|ACN35764.1| unknown [Zea mays]
gi|414873681|tpg|DAA52238.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
gi|414873682|tpg|DAA52239.1| TPA: hypothetical protein ZEAMMB73_597734 [Zea mays]
Length = 215
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 138/215 (64%), Gaps = 15/215 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+++TF ++ WL + R HA+ N+ IM+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V++E+G+ A++ GL FLE SA A NVE+AF + I Q I + AL A
Sbjct: 129 LNHLRSVAEEDGQALAEKEGLSFLETSALEALNVEKAFQTVLSDIHQIISKKALAAQE-- 186
Query: 183 SGIKVGYGRGQGPSGA------RDGTVSQRGGCCS 211
G GP G D + + + GCCS
Sbjct: 187 -------AAGSGPPGQGTTINIADPSANTKRGCCS 214
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA +RAVS E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A N+
Sbjct: 125 LADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKDRM--ASQPAANNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+ CCS
Sbjct: 183 RPATVQI-RGQ--------PVDQKTSCCS 202
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 137/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK +IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS E + FA E G+ F+E SA+ A NVE+AF+ AA I + A N+
Sbjct: 125 LEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRM---ASQPANNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+GGCCS
Sbjct: 182 RPPTVQI-RGQ--------PVAQKGGCCS 201
>gi|343428423|emb|CBQ71953.1| probable GTP-binding protein rab-4b [Sporisorium reilianum SRZ2]
Length = 246
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 128/188 (68%), Gaps = 1/188 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K+IIIG+ G GKSCLL F +F+ TIGVEF +R++ I + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT+R TF LS WL+DAR A+P++ ++LVGNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAGALLVYDITKRSTFEPLSRWLQDARALASPDLVVVLVGNKT 131
Query: 122 DLAH-RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D R V E ++A ENG+LFLE S+ T +NVE F A IL I+ G L+
Sbjct: 132 DRGEDEREVGYLEASKWANENGVLFLETSSMTGENVEAPFALAARSILLAIESGKLNPEK 191
Query: 181 DQSGIKVG 188
SG+ G
Sbjct: 192 AGSGVSYG 199
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ + + S GGCC
Sbjct: 188 SNVKIQSTKVKQSS----------GGCC 205
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA ++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATVG-GEK 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ G PS GGCC
Sbjct: 184 PNVKLTPGTSVKPSS---------GGCC 202
>gi|320167252|gb|EFW44151.1| tubulovesicle-associated protein [Capsaspora owczarzaki ATCC 30864]
Length = 216
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/212 (49%), Positives = 134/212 (63%), Gaps = 8/212 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADANIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV ++ + FA++N L F+E SA A NVE AF +I + + + VND
Sbjct: 129 LRHLRAVPTDDSKSFAEKNNLSFIETSALDATNVELAFQNILTEIYHIVSQKTI--VNDD 186
Query: 183 SGIKVGYGRGQ----GPSGARDGTVSQRGGCC 210
KV Q PS A D ++GGCC
Sbjct: 187 HVAKVPTSNVQTITVAPSEATDD--KKKGGCC 216
>gi|401407236|ref|XP_003883067.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
gi|325117483|emb|CBZ53035.1| putative Ras family domain-containing protein [Neospora caninum
Liverpool]
Length = 217
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 140/209 (66%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKSCLLL+F+D F + TIGV+F R + +D +KLQIWDT
Sbjct: 10 YDHLFKLVLIGDSGVGKSCLLLRFSDDAFTESYITTIGVDFRFRTINVDNEIVKLQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT +YYRGA G +LVYD+T R++F H+ WL + ++AN N +LVGNKC+
Sbjct: 70 AGQERFRTITSAYYRGADGIVLVYDVTDRDSFGHVDEWLAEVNRYANENTCKILVGNKCE 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
A R VS EEG++ A+E G+ F+E SA+ A NV+EAF A ++++ Q + A +
Sbjct: 130 KADDRQVSAEEGQRKAEELGISFIETSAKNAINVDEAFTVVARELIKMKQSAS--AAGGR 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S G P+GA + ++QR G CS
Sbjct: 188 SAGPQGMRIASQPTGAENRAMAQRSGNCS 216
>gi|340517716|gb|EGR47959.1| small GTPase of the rab family [Trichoderma reesei QM6a]
Length = 226
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 155/227 (68%), Gaps = 26/227 (11%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT-------IDGRPI 55
+DY+ K + IGD+G GKS L ++ + RF HD+TIGVEFG+R+V I + +
Sbjct: 7 WDYIAKLVCIGDSGCGKSSLTIRLCEGRFSAHHDVTIGVEFGSRIVPPRRDTSGIPQKHM 66
Query: 56 KLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIM 115
KL +WDTAGQE+++S+TRSY+RGA+GALLV+D++R+ TF H++ WL D RQ A P++ I+
Sbjct: 67 KLSLWDTAGQETYKSVTRSYFRGASGALLVFDLSRKATFQHVTDWLNDLRQIAEPDIVIV 126
Query: 116 LVGNKCDLA----HRRAVSKEEGEQFAKENGLL-FLEASARTAQNVEEAFIKTAAKILQN 170
LVGNK DL ++R V++EE E++A+ NG+L ++E SA++ +NVE+AF++ A +I QN
Sbjct: 127 LVGNKADLTQQEDNKREVTREEAEEWARRNGILEYVETSAKSGENVEKAFMRVAERIYQN 186
Query: 171 IQEGALDAVNDQSGIKVGYGRGQGPS--GARDGTVSQR-----GGCC 210
IQ G + + +SG+K GPS G+R ++ GGCC
Sbjct: 187 IQAGKYNLNDRRSGVK-------GPSAGGSRQVRLNADANKAGGGCC 226
>gi|392578458|gb|EIW71586.1| hypothetical protein TREMEDRAFT_42942 [Tremella mesenterica DSM
1558]
Length = 214
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 1/210 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYENVTRWLKELRDHADQNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + F+ EN L F+E SA A NVE AF I + + ALD+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENNLSFIETSALDASNVESAFQNILTDIYRIVSSKALDSSGD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
G P+ A DG Q CC+
Sbjct: 186 VIKPAGGETILVAPT-ADDGGAKQGSKCCA 214
>gi|388852994|emb|CCF53442.1| probable GTP-binding protein [Ustilago hordei]
Length = 246
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 100/188 (53%), Positives = 127/188 (67%), Gaps = 1/188 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K+IIIG+ G GKSCLL F +F+ TIGVEF +R++ I + +KLQ+WD
Sbjct: 12 AYDFLLKFIIIGEAGTGKSCLLHHFIHNQFKDQSAHTIGVEFSSRLIKIGNKSVKLQLWD 71
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAA ALLVYDIT+R TF LS WL DAR A+P+++++LVGNK
Sbjct: 72 TAGQERFRSVTRSYYRGAAAALLVYDITKRSTFEPLSRWLTDARALASPDLAVVLVGNKT 131
Query: 122 DLAH-RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
D R V E ++A ENG+LFLE S+ T +NVE F A IL I+ G LD
Sbjct: 132 DRGEDEREVGYLEASKWANENGVLFLETSSMTGENVEAPFALAARSILLAIESGKLDPEK 191
Query: 181 DQSGIKVG 188
SG+ G
Sbjct: 192 AGSGVSYG 199
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF +L WL++ R H + N+ IM VGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSNIVIMFVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + ++I + + ALD +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G G D + ++ GCCS
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCS 216
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A VN+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM---ASQPVNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKAGCCS 201
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + + A+N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM--ASQPAMNNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 183 RPPTVQI-RGQ--------PVNQKSGCCS 202
>gi|15222396|ref|NP_172221.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
gi|297843530|ref|XP_002889646.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332320580|sp|Q9LNW1.2|RAA2B_ARATH RecName: Full=Ras-related protein RABA2b; Short=AtRABA2b
gi|297335488|gb|EFH65905.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332190000|gb|AEE28121.1| RAB GTPase homolog A2B [Arabidopsis thaliana]
Length = 214
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF ++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V+ E+G A++ GL FLE SA A N+E+AF ++I I + AL A +
Sbjct: 129 LNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKAL-AAQEA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G G G S D + + R GCCS
Sbjct: 188 AGNLPGQGTAINIS---DSSATNRKGCCS 213
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 139/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A VN+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM---ASQPVNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKSGCCS 201
>gi|297849266|ref|XP_002892514.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
gi|297338356|gb|EFH68773.1| hypothetical protein ARALYDRAFT_888208 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE+AF ++I + I + ++ + DQ
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISS--DQ 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GQ A + + CCS
Sbjct: 187 TTANASIKEGQTIDVAATSESTAKKPCCS 215
>gi|407917911|gb|EKG11211.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 212
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 135/208 (64%), Gaps = 1/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + + ALD
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDQGESA 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G R + + D T +++G CC
Sbjct: 186 QNPIGGERRTLEITNSAD-TEAKQGKCC 212
>gi|395330307|gb|EJF62691.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 212
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
++DYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNIETKSTIGVEFATRSINVEGKTLKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI++ T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA ENGL F+E SA A NVE AF I + + +L+ D
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSED 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK G S + D SQ G CC
Sbjct: 186 P--IKPTSGDTIQVSHSVDQNQSQGGKCC 212
>gi|358248612|ref|NP_001239655.1| uncharacterized protein LOC100810759 [Glycine max]
gi|255646959|gb|ACU23949.1| unknown [Glycine max]
Length = 217
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDANIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ +A++ L F+E SA A NVE AF + +I + + + A++ +
Sbjct: 130 LRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGA--E 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G +G+ D + +R GCCS
Sbjct: 188 NGTASVPAKGEKIDLKNDVSALKRVGCCS 216
>gi|159467367|ref|XP_001691863.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|3025293|sp|Q39572.1|YPTC6_CHLRE RecName: Full=Ras-related protein YPTC6
gi|806728|gb|AAA82729.1| YptC6 [Chlamydomonas reinhardtii]
gi|158278590|gb|EDP04353.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 216
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R V E + F + GL F+E SA + NVE+AF + +I + + LD+ +++
Sbjct: 129 LKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNR 188
Query: 183 SGIKVGYGRGQ-GPSGARDGTVSQRGGCCS 211
K+G GR A D ++GGCCS
Sbjct: 189 P--KIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>gi|15219955|ref|NP_173136.1| Ras-related protein RABA1b [Arabidopsis thaliana]
gi|3024526|sp|Q39222.1|RAA1B_ARATH RecName: Full=Ras-related protein RABA1b; Short=AtRABA1b; AltName:
Full=Ras-related protein Rab11; Short=AtRab11
gi|9802771|gb|AAF99840.1|AC051629_7 GTP-binding protein Rab11 [Arabidopsis thaliana]
gi|451860|gb|AAA32872.1| small GTP-binding protein [Arabidopsis thaliana]
gi|30102592|gb|AAP21214.1| At1g16920 [Arabidopsis thaliana]
gi|110735723|dbj|BAE99841.1| hypothetical protein [Arabidopsis thaliana]
gi|332191401|gb|AEE29522.1| Ras-related protein RABA1b [Arabidopsis thaliana]
Length = 216
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF ++ WL++ + H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ +A++ L F+E SA A NVE+AF + +I + + ++A D
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ D + ++ GCCS
Sbjct: 190 NA---SVPKGEKIEVKNDVSALKKLGCCS 215
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGK+ LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ T+ + WL++ R HA+ N+ IMLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSNIVIMLVGNKSD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV +E +QFA +NGL F+E SA A NV+++F + +I + + AL++ N+
Sbjct: 127 LRHLRAVPTDEAKQFASDNGLSFIETSALDATNVDQSFQQILTEIYRIVSNKALESSNN- 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK G+ S D Q GGCC
Sbjct: 186 -TIKPTSGQTILVSQTPDEQTKQ-GGCC 211
>gi|392567720|gb|EIW60895.1| GTPase [Trametes versicolor FP-101664 SS1]
Length = 212
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
++DYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLETKSTIGVEFATRSINVDGKTLKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI++ T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITAAYYRGAVGALLVYDISKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV EE + FA ENGL F+E SA A NVE AF I + + +L+ +D
Sbjct: 126 DLKHLRAVPTEEAKAFAAENGLSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSDD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK G S + D + G CC
Sbjct: 186 P--IKPTSGDTITVSHSVDTPANAGGKCC 212
>gi|212532303|ref|XP_002146308.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|212532305|ref|XP_002146309.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|242775273|ref|XP_002478610.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
gi|210071672|gb|EEA25761.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|210071673|gb|EEA25762.1| Ras GTPase Rab11, putative [Talaromyces marneffei ATCC 18224]
gi|218722229|gb|EED21647.1| Ras GTPase Rab11, putative [Talaromyces stipitatus ATCC 10500]
Length = 211
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 105/216 (48%), Positives = 135/216 (62%), Gaps = 18/216 (8%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV E+ +QFA EN L F+E SA A NVE AF +I + + ALD
Sbjct: 126 LRHLRAVPTEDAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDQ---- 181
Query: 183 SGIKVGYGRGQGPSGARDGTV--------SQRGGCC 210
G G GQ P G R V + GCC
Sbjct: 182 -----GEG-GQNPLGERRQVVEISKTQDTETKQGCC 211
>gi|158828213|gb|ABW81091.1| Gtpbnd1 [Cleome spinosa]
Length = 216
Score = 201 bits (511), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF ++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFENVPRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R++S E+G A++ GL FLE SA A N+E+AF ++I + + AL A
Sbjct: 129 LNHLRSISDEDGRSLAEKEGLSFLETSALEASNIEKAFQSILSEIYHIVSKKALAAQEAA 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ V GQG + D + R GCCS
Sbjct: 189 GSMAVP---GQGTAINISDTYATNRRGCCS 215
>gi|357461039|ref|XP_003600801.1| Ras-related protein Rab11A [Medicago truncatula]
gi|355489849|gb|AES71052.1| Ras-related protein Rab11A [Medicago truncatula]
Length = 216
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTIQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF ++ WL + R HA+ N+ IML GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMLAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS ++ + A++ L FLE SA A NVE+AF I Q I + AL A
Sbjct: 129 LNHLRAVSSDDAQNLAEKETLSFLETSALEALNVEKAFQTILFDIYQIISKKALAAQESA 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S V +G S GTV ++ CCS
Sbjct: 189 STTSVPHGTTINVSNM-SGTV-EKKSCCS 215
>gi|409075756|gb|EKM76133.1| hypothetical protein AGABI1DRAFT_116039 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426199738|gb|EKV49662.1| hypothetical protein AGABI2DRAFT_190146 [Agaricus bisporus var.
bisporus H97]
Length = 221
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/221 (46%), Positives = 140/221 (63%), Gaps = 13/221 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++ I + + +KLQ
Sbjct: 4 ITWHYVLKFIITGDAAVGKSSLLVRLTDQRFIANPDPTLGVEFGSKLIPIPEEDKIVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T ++F + SWL D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTNHKSFTNAKSWLADVREHADPHLTCILVG 123
Query: 119 NKCDLAHR--------RAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQN 170
NK DL R VS EEG +FA++ LLF+EASAR+ NVE AF++ + IL+
Sbjct: 124 NKVDLCENDQDGPSKPRQVSTEEGAEFAQQEQLLFVEASARSGLNVELAFVEASRDILRK 183
Query: 171 IQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
++ G D D V P+ R CCS
Sbjct: 184 VKNGVFD---DTRSPGVKSSSYTNPNSLALEQTPSRNTCCS 221
>gi|218194009|gb|EEC76436.1| hypothetical protein OsI_14124 [Oryza sativa Indica Group]
Length = 215
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 135/215 (62%), Gaps = 15/215 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + I+G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+++TF ++ WL + R HA+ N+ IM+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G+ A++ GL FLE SA A NVE+AF I Q I + AL A
Sbjct: 129 LNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQE-- 186
Query: 183 SGIKVGYGRGQGPS------GARDGTVSQRGGCCS 211
G GP D V+ + GCCS
Sbjct: 187 -------AAGSGPPTQGTTINVTDSAVNTKRGCCS 214
>gi|356538966|ref|XP_003537971.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 216
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+H RAVS+++G+ A+ GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAA 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
G + GQG + D + + + GCCS
Sbjct: 189 VGTTLP---GQGTTINVGDASGNTKRGCCS 215
>gi|402218220|gb|EJT98297.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 222
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 111/221 (50%), Positives = 147/221 (66%), Gaps = 12/221 (5%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ ++ K+II+GD GVGKS +L++FTD RF D T+GVEFG+++V + + + IK+Q
Sbjct: 4 LTWQFIIKFIIVGDAGVGKSSILIRFTDSRFLANPDPTLGVEFGSKLVHLADEDKTIKVQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
IWDTAG E FRSITRSYYRGAAGALLVYD T R +FN+ SWL+D R+HA+PN++ +LV
Sbjct: 64 IWDTAGAEQFRSITRSYYRGAAGALLVYDATSRTSFNNAKSWLQDVREHADPNLTCILVA 123
Query: 119 NKCDLAH-------RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI 171
NK DL RRAV+KEE +A E GLLFLE SA+T +N+EEAF IL I
Sbjct: 124 NKLDLLQEGEEGDRRRAVTKEEAAAWANEEGLLFLEGSAKTGENIEEAFESAVRDILDKI 183
Query: 172 QEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGG-CCS 211
+ G D + SGIK G +G T + G CC+
Sbjct: 184 KRGVFDH-HKPSGIKPARS-APGSTGLSLETEEKPPGYCCT 222
>gi|17559536|ref|NP_507084.1| Protein F11A5.4 [Caenorhabditis elegans]
gi|3875761|emb|CAB07357.1| Protein F11A5.4 [Caenorhabditis elegans]
Length = 203
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/174 (55%), Positives = 126/174 (72%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MS D++FKY+IIGD GVGKS LLL+F K F +H T+G+EFG R + ID + +KL +W
Sbjct: 1 MSSDHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DT GQE FRS+ SYYR A GALLVYDIT RE+F HL WL D ++ +P++ I+L+GNK
Sbjct: 61 DTCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG 174
DL R V KEEGE FA+E GL+F+E SA+T + VEEAF+ +A +I + + G
Sbjct: 121 SDLEADREVRKEEGEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEIYRKLNFG 174
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS + + FA E G+ F+EASA++A NVE+AF+ AA+I + A ++
Sbjct: 125 LNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRM---ATQPASNN 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ RGQ V+Q+ GCCS
Sbjct: 182 AKPPTVQIRGQ--------PVNQKNGCCS 202
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATSGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
S +K+ + V Q GGCC
Sbjct: 188 SNVKI-----------QSTPVKQSSGGCC 205
>gi|320594196|gb|EFX06599.1| Ras GTPase [Grosmannia clavigera kw1407]
Length = 211
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 135/209 (64%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS-GDG 184
Query: 183 SGIKVGYGRGQGPSG-ARDGTVSQRGGCC 210
+ +G G S A D T + GCC
Sbjct: 185 AQATIGAGTNISLSKPAEDATA--KSGCC 211
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V ++G+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKAD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V + + FA E G+ FLE SA+ A NVE+AF+ AA+I + + A+N
Sbjct: 125 LTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRM--ASQPAMNSN 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
V +GQ ++Q+GGCC
Sbjct: 183 KPNNVSLNKGQ--------PLNQKGGCC 202
>gi|303742|dbj|BAA02112.1| GTP-binding protein [Pisum sativum]
gi|738936|prf||2001457D GTP-binding protein
Length = 217
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ FA+ F+E SA + NVE AF + +I + + + AL+ +D
Sbjct: 130 LRHLRAVSTEDSTSFAEREHTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++GGCCS
Sbjct: 190 AALP----KGQTINVGSRDDVSAVKKGGCCS 216
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQWLSEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS + + FA E G+ F+EASA++A NVE+AF+ AA+I + A ++
Sbjct: 125 LNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRM---ATQPASNN 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ RGQ V+Q+ GCCS
Sbjct: 182 AKPPTVQIRGQ--------PVNQKSGCCS 202
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 40 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 99
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 100 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 159
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 160 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 219
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 220 SNVKI-----QSTPVKQSG-----GGCC 237
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 138/208 (66%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA ++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGGEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ G S GGCC
Sbjct: 185 PNVKLTPGTTVKTSS---------GGCC 203
>gi|351720917|ref|NP_001237704.1| uncharacterized protein LOC100305599 [Glycine max]
gi|255626033|gb|ACU13361.1| unknown [Glycine max]
Length = 218
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 135/212 (63%), Gaps = 4/212 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R V +D + +K QIWDT
Sbjct: 7 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLETKSTIGVEFATRSVPVDSKLVKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + +MLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTEAYVVVMLVGNKAD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EE +FA++ + F+E SA + NV+ AFI+ +I + L+ V+D
Sbjct: 127 LRHLRAVSTEEATEFAEKESIYFMETSALESLNVDNAFIEVLTQIYNVVSRKTLETVDDD 186
Query: 183 SGIKVGYGRGQGPS-GARDGTVS--QRGGCCS 211
K +G+ G +D VS ++ GCCS
Sbjct: 187 PSTK-ALPKGETIVIGTKDDDVSAVKKSGCCS 217
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + S GGCC
Sbjct: 185 SNVNI----------QSTPVKSSGGGCC 202
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/202 (45%), Positives = 136/202 (67%), Gaps = 4/202 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKIL----QNIQEGALD 177
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF+ A I+ + + E
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIMTRLNRKMNENNPS 183
Query: 178 AVNDQSGIKVGYGRGQGPSGAR 199
+K+ R + PS R
Sbjct: 184 GGGGGGAVKITESRSKKPSFFR 205
>gi|259489417|tpe|CBF89672.1| TPA: Ras GTPase similar to RAB11B (Eurofung) [Aspergillus nidulans
FGSC A4]
Length = 210
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 134/208 (64%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+G GKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + AL+ +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG--ES 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G VG R Q + +GGCC
Sbjct: 184 GGASVG-ERRQIIDIEKTQDTENKGGCC 210
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 139/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A N+
Sbjct: 125 LAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM---ASQPANNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ ++Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PMNQKSGCCS 201
>gi|357452099|ref|XP_003596326.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|355485374|gb|AES66577.1| Ras-related protein Rab-11B [Medicago truncatula]
gi|388517873|gb|AFK46998.1| unknown [Medicago truncatula]
Length = 217
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 136/210 (64%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD-AVND 181
L H AVS E+G+ +A++ L F+E SA A NVE AF + +I + + + A++ A N
Sbjct: 130 LRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYRIVSKKAVEGAENG 189
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G+ D + +R GCCS
Sbjct: 190 NASVP---AKGEKIDLKNDVSALKRVGCCS 216
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T ++FN++ WL + ++A+ N+S +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+A +R V ++ + FA E G+ FLE SA+ A NVE+AFI A ++ + + +
Sbjct: 125 MAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTEGNRKT 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ +GQ + Q+G CCS
Sbjct: 185 NTVEM---KGQ--------PLQQKGSCCS 202
>gi|226491888|ref|NP_001147252.1| ras-related protein Rab11C [Zea mays]
gi|195609118|gb|ACG26389.1| ras-related protein Rab11C [Zea mays]
Length = 217
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADYNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE+AF ++I + I + ++ + DQ
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEIYRIISKKSISS--DQ 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GQ A + + CCS
Sbjct: 187 ASANANVKEGQTIDVAASSESNTKKPCCS 215
>gi|66801327|ref|XP_629589.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996490|sp|Q54DA7.1|RAB4_DICDI RecName: Full=Ras-related protein Rab-4
gi|60462986|gb|EAL61182.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 205
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 124/173 (71%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
YL K+IIIG VGKSCLL +F D +F+ TIGV+F +R+V I G+ +KLQIWDTAG
Sbjct: 6 YLVKFIIIGSQSVGKSCLLFRFIDNKFKSQSTHTIGVDFSSRVVDIQGKNVKLQIWDTAG 65
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRS+ SYYRG+AG LVYD+T RE++NH+++WL D + A+P+++I+LVGNK DL
Sbjct: 66 QERFRSVVISYYRGSAGVALVYDVTNRESYNHITNWLSDVKSLASPDVTIILVGNKADLT 125
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
+R V+ E + A+ENGLLF+E SA T + VEE F+K I+ I G ++
Sbjct: 126 EQREVTFLEASRIAQENGLLFMETSALTGEGVEEMFLKCTRTIMTKIDSGEVN 178
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENNFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G G D + ++ GCCS
Sbjct: 190 AALPKGQTINVGTKD--DVSAVKKVGCCS 216
>gi|3024501|sp|Q40193.1|RB11C_LOTJA RecName: Full=Ras-related protein Rab11C
gi|1370146|emb|CAA98179.1| RAB11C [Lotus japonicus]
Length = 216
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS+++G +++ GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LNHLRAVSEDDGGALSEKEGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAT 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+G V GQG + D + + + GCCS
Sbjct: 189 AGASVP---GQGTTINVADTSGNTKKGCCS 215
>gi|356548393|ref|XP_003542586.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVLKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENMERWLKELRDHTDANIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EE FA+ F+E SA + NVE AF + +I + + AL+ +D
Sbjct: 130 LRHLRAVSTEEATAFAEREKTFFMETSALESMNVENAFTEVLTQIYHVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++ GCCS
Sbjct: 190 AALP----KGQTINVGSRDDVSAVKKDGCCS 216
>gi|156063958|ref|XP_001597901.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980]
gi|154697431|gb|EDN97169.1| hypothetical protein SS1G_02097 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 213
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + + ALD D
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDN-GDS 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG-CC 210
+ +G G + ++ GG CC
Sbjct: 185 AQATIGSGTNITLTPPPSDEAAKGGGKCC 213
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 49 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 108
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 109 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 168
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 169 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 228
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 229 SNVKI-----QSTPVKQSG-----GGCC 246
>gi|156360721|ref|XP_001625174.1| predicted protein [Nematostella vectensis]
gi|156211993|gb|EDO33074.1| predicted protein [Nematostella vectensis]
Length = 219
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYL+K ++IGD+GVGKS LL +FT F TIGVEF R + ++G+ IK Q+WDT
Sbjct: 9 YDYLYKIVLIGDSGVGKSSLLSRFTRNEFDIESKSTIGVEFATRSIQVEGKIIKAQVWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GA+LVYD+T+++TF + WL + R+HA+P + +MLVGNKCD
Sbjct: 69 AGQERYRAITSAYYRGAVGAVLVYDLTKQKTFQDVERWLLEVREHADPTIVVMLVGNKCD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ ++ +++ E+GL F+EASA A NVEEAF +T K L ++Q + D
Sbjct: 129 LKHLRAVASDDAKKYGDEHGLAFIEASALDATNVEEAFQQTITK-LHHVQLAKMKKELDG 187
Query: 183 SGIKVGYGRGQGPSGARD-GTVSQRGGCCS 211
+ G + D SQ CC+
Sbjct: 188 KDTREGQTAASKQQNSVDLNKPSQGKNCCT 217
>gi|21555752|gb|AAM63927.1| guanine nucleotide regulatory protein, putative [Arabidopsis
thaliana]
Length = 216
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 135/209 (64%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R +DG+ +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTFKVDGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF ++ WL++ + H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ +A++ L F+E SA A NVE+AF + +I + + ++A D
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ D + ++ GCCS
Sbjct: 190 NA---SVPKGEKIEVKNDVSALKKLGCCS 215
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 138/200 (69%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLEASA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|115441051|ref|NP_001044805.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|15408893|dbj|BAB64284.1| putative Ras-related GTP-binding protein RAB11C [Oryza sativa
Japonica Group]
gi|113534336|dbj|BAF06719.1| Os01g0848700 [Oryza sativa Japonica Group]
gi|125528382|gb|EAY76496.1| hypothetical protein OsI_04436 [Oryza sativa Indica Group]
gi|125572634|gb|EAZ14149.1| hypothetical protein OsJ_04079 [Oryza sativa Japonica Group]
gi|215700996|dbj|BAG92420.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 216
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + I+G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFFLESKSTIGVEFATRTLQIEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLV+DIT+R+TF+++ WL + R HA+ N+ +M+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G F+++ GL FLE SA A NVE+AF ++I Q + + AL A
Sbjct: 129 LNHLRSVPEEDGHAFSEKEGLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESA 188
Query: 183 SGIKVGYGRG-QGPS-GARDGTVSQRGGCCS 211
S GR QG + + + +G CCS
Sbjct: 189 S----TNGRSMQGTTINVAEAPAATKGSCCS 215
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS E G+ A E G+ FLE SA+ A NVE+AF+ A +I + +
Sbjct: 125 LAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPATNASKP 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ V+Q+ CCS
Sbjct: 185 ATVQM---RGQ--------PVAQQSSCCS 202
>gi|242091099|ref|XP_002441382.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
gi|241946667|gb|EES19812.1| hypothetical protein SORBIDRAFT_09g025640 [Sorghum bicolor]
Length = 220
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 14 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF+++ WL + R H + ++ +ML+GNK D
Sbjct: 74 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLIGNKSD 133
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS ++ +++A+ + F+E SA A NV+ AF + +I Q + + ++A+ +
Sbjct: 134 LRHLVAVSTDDAKEYAEAESMYFMETSALDATNVDNAFSEVLTQIYQIVSKKTVEALEEG 193
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G+G+ + D + +R GCCS
Sbjct: 194 AA---GPGKGEKINVKDDVSAMKRVGCCS 219
>gi|115456287|ref|NP_001051744.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|27545031|gb|AAO18437.1| Ras-related GTP-binding protein [Oryza sativa Japonica Group]
gi|108711823|gb|ABF99618.1| Ras-related protein Rab11A, putative, expressed [Oryza sativa
Japonica Group]
gi|113550215|dbj|BAF13658.1| Os03g0823700 [Oryza sativa Japonica Group]
gi|215692445|dbj|BAG87865.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222626072|gb|EEE60204.1| hypothetical protein OsJ_13172 [Oryza sativa Japonica Group]
Length = 215
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 105/215 (48%), Positives = 135/215 (62%), Gaps = 15/215 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + I+G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGQTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+++TF ++ WL + R HA+ N+ IM+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQTFENIQRWLRELRDHADSNIVIMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G+ A++ GL FLE SA A NVE+AF I Q I + AL A
Sbjct: 129 LNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILKDIHQIISKKALAAQE-- 186
Query: 183 SGIKVGYGRGQGPS------GARDGTVSQRGGCCS 211
G GP D V+ + GCCS
Sbjct: 187 -------AAGSGPPTQGTTINVTDSAVNTKRGCCS 214
>gi|356542139|ref|XP_003539528.1| PREDICTED: ras-related protein Rab11C-like isoform 1 [Glycine max]
gi|356542141|ref|XP_003539529.1| PREDICTED: ras-related protein Rab11C-like isoform 2 [Glycine max]
Length = 216
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+H RAVS+++G+ A+ GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAA 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
G + GQG + D + + + GCCS
Sbjct: 189 VGTILP---GQGTTINVGDASGNTKRGCCS 215
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
S +K+ + V Q GGCC
Sbjct: 188 SNVKI-----------QSTPVKQSSGGCC 205
>gi|267527|sp|Q01111.1|YPT3_NICPL RecName: Full=Ras-related protein YPT3
gi|19715|emb|CAA45351.1| Np-ypt3 [Nicotiana plumbaginifolia]
Length = 218
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 137/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + ID + IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKSLNIDNKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR T+ +++ WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTYENVTRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS +E + A+ GL F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVAVSTDEAKGLAEREGLYFMETSALEATNVENAFTEALTQIYRIVSKKAVEA-GDE 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G+ + +G+ ++ GCCS
Sbjct: 189 GATSSAPPKGETINIKDEGSSWKKFGCCS 217
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RA++ E+ FA+ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 130 LRHLRAITIEDATAFAQRQNTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + RGQ + G+RD + ++ GCCS
Sbjct: 190 AALP----RGQTINVGSRDDVSAVKKAGCCS 216
>gi|15217568|ref|NP_172434.1| Ras-related protein RABA2a [Arabidopsis thaliana]
gi|3024516|sp|O04486.1|RAA2A_ARATH RecName: Full=Ras-related protein RABA2a; Short=AtRABA2a; AltName:
Full=Ras-related protein Rab11C; Short=AtRab11C; Flags:
Precursor
gi|2160157|gb|AAB60720.1| Strong similarity to A. thaliana ara-2 (gb|ATHARA2). ESTs
gb|ATTS2483,gb|ATTS2484,gb|AA042159 come from this gene
[Arabidopsis thaliana]
gi|2231303|gb|AAB61994.1| ras-related small GTPase [Arabidopsis thaliana]
gi|15010638|gb|AAK73978.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|21553810|gb|AAM62903.1| putative RAS-related protein RAB11C [Arabidopsis thaliana]
gi|22137284|gb|AAM91487.1| At1g09630/F21M12_2 [Arabidopsis thaliana]
gi|332190350|gb|AEE28471.1| Ras-related protein RABA2a [Arabidopsis thaliana]
Length = 217
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE+AF +++ + I + ++ + DQ
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLSFIETSALEALNVEKAFQTILSEVYRIISKKSISS--DQ 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ GQ A + + CCS
Sbjct: 187 TTANANIKEGQTIDVAATSESNAKKPCCS 215
>gi|255568357|ref|XP_002525153.1| protein with unknown function [Ricinus communis]
gi|223535612|gb|EEF37280.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 135/210 (64%), Gaps = 5/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + FA+ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 130 LRHLRAVTTEDAKAFAERESTFFMETSALESLNVENAFTEVLTQIYRVVSRKALDVGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ + +GQ + G D + ++ GCCS
Sbjct: 190 AALP----KGQTINVGKDDVSAVKKVGCCS 215
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 139/210 (66%), Gaps = 13/210 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A+N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADI--KTRMASQPAMNN- 181
Query: 183 SGIKVGYGRGQGPSGARDG-TVSQRGGCCS 211
+ PS G V+Q+ GCCS
Sbjct: 182 ---------ARPPSVQLQGQPVNQKSGCCS 202
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IM VGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + ++I + + ALD +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLSQIYRVVSRKALDIGDDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G G D + ++ GCCS
Sbjct: 190 AALPKGQTINVGSKD--DVSAVKKVGCCS 216
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
SG +K+ R + S R
Sbjct: 184 GSGGPVKITENRSKKTSFFR 203
>gi|154303550|ref|XP_001552182.1| hypothetical protein BC1G_09346 [Botryotinia fuckeliana B05.10]
gi|347840921|emb|CCD55493.1| similar to ras-related protein rab-11b [Botryotinia fuckeliana]
Length = 213
Score = 200 bits (509), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 134/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDAKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND- 181
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + + ALD +
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSQKALDNGDSA 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
Q+ I G P + D G CC
Sbjct: 186 QATIASGTNITLTPPPS-DEAAKGGGKCC 213
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 92/200 (46%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ RR VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|327300815|ref|XP_003235100.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326462452|gb|EGD87905.1| GTP-binding protein ypt3 [Trichophyton rubrum CBS 118892]
gi|326468660|gb|EGD92669.1| GTP-binding protein ypt3 [Trichophyton tonsurans CBS 112818]
gi|326485125|gb|EGE09135.1| GTP-binding protein ypt3 [Trichophyton equinum CBS 127.97]
Length = 210
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + AL++ D
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALES-GDS 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S ++G + + D ++ GCC
Sbjct: 185 SANQLGDRKVVEITKTPDS--EKKQGCC 210
>gi|393247234|gb|EJD54742.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 213
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 132/210 (62%), Gaps = 3/210 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + F+ ENGL F+E SA A NVE AF I + + AL+ D
Sbjct: 126 DLKHLRAVPTDEAKAFSTENGLSFIETSALDASNVEAAFQTILTDIYRIVSSKALEQAAD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGG-CC 210
IK G D ++ GG CC
Sbjct: 186 --SIKPTQGDSIPVRPTLDAPANKEGGKCC 213
>gi|315048511|ref|XP_003173630.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
gi|311341597|gb|EFR00800.1| hypothetical protein MGYG_03805 [Arthroderma gypseum CBS 118893]
Length = 210
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDVSKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + AL++ D
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIFRIVSSKALES-GDS 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S ++G + + D ++ GCC
Sbjct: 185 SANQLGDRKVVEITKTPDS--EKKPGCC 210
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 140/210 (66%), Gaps = 12/210 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI-QEGALDAVND 181
LA R VS E G+ A E G+ FLE SA+ A NVE+AF+ A +I + + A +
Sbjct: 125 LAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGASR 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ VSQ+ CCS
Sbjct: 185 PATVQM---RGQ--------PVSQQSSCCS 203
>gi|452824501|gb|EME31503.1| Rab family, other [Galdieria sulphuraria]
Length = 215
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 136/209 (65%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + V +G+ IK QIWDT
Sbjct: 8 YDYLFKIVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSVQTEGKTIKAQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI+++E+F + WL++ R HA+ N+ IMLVGNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDISKKESFIGVEKWLKELRDHADSNIVIMLVGNKSD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EEG++FA+++ L F+E SA A NVE+AF + +I + + + AL +
Sbjct: 128 LKHLRAVSTEEGKEFAEKHSLSFIETSALDATNVEQAFTQLLTEIYRIVHKKALTNEKNP 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S K G + + + CCS
Sbjct: 188 S-FKPALGESVVVRDPAEDKGTHKKKCCS 215
>gi|359496842|ref|XP_003635353.1| PREDICTED: ras-related protein RABB1c-like, partial [Vitis
vinifera]
Length = 121
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 93/121 (76%), Positives = 104/121 (85%)
Query: 91 RETFNHLSSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASA 150
RETFNHL+SWLEDARQHAN NMSIML+GNKCDLAHRRAVS EEGEQFAKENGL+F+EASA
Sbjct: 1 RETFNHLASWLEDARQHANANMSIMLIGNKCDLAHRRAVSTEEGEQFAKENGLIFMEASA 60
Query: 151 RTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+TAQNVEEAF+KTAA I + IQ+G D N+ GIKVGYG GPSG RDG+ SQ GGCC
Sbjct: 61 KTAQNVEEAFVKTAATIYKKIQDGVFDVSNESQGIKVGYGGIPGPSGGRDGSSSQAGGCC 120
Query: 211 S 211
+
Sbjct: 121 N 121
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 179
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 180 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 239
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 240 SNVKI-----QSTPVKQSG-----GGCC 257
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 141/209 (67%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T ++FN++ WL + ++A+ N+S +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQWLSEIDKYASDNVSKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++AV ++ + FA E G+ FLE SA+ A NVE+AF+ A ++ + + +
Sbjct: 125 LTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTEGNRKA 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ +GQ + Q+GGCCS
Sbjct: 185 NTVEM---KGQ--------PLQQKGGCCS 202
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGK+ LL +FT F TIGVEF R V +D + +K QIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + +T+ ++ WL++ R HA+ N+ +MLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA +NGL F+E SA + NVE AF + +I + + AL++ ND
Sbjct: 127 LRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDV 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
I+ G+ + + Q GGCC
Sbjct: 187 --IRPTAGQTINVNQPTEDE-KQGGGCC 211
>gi|302784965|ref|XP_002974254.1| rab family GTPase [Selaginella moellendorffii]
gi|300157852|gb|EFJ24476.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 98/213 (46%), Positives = 140/213 (65%), Gaps = 7/213 (3%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGKS LL +F F TIGVEF R +++DG+ IK QIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYDITR++TF H++ WLE+ R HA+ N+ IM+VGNK DL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ RA+S EEG +F+++ GL F+E SA + NVE AF +I + + + +L A +
Sbjct: 129 SNSRAMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADDPNG 188
Query: 184 GIKVGYGRGQGPSGAR-----DGTVSQRGGCCS 211
G+ PSG + + T ++ CCS
Sbjct: 189 GL--ANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +ETFN++ WL++ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV + + +A + G+ FLE SA+++ NVE+AF+ A++I + G +
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRM--GPVQGAGGA 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G+++ +G++ + GGCC
Sbjct: 186 PGVRI--------TGSQPVQDKKSGGCC 205
>gi|15233873|ref|NP_193578.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
gi|297800216|ref|XP_002867992.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|75098755|sp|O49513.1|RAA1E_ARATH RecName: Full=Ras-related protein RABA1e; Short=AtRABA1e
gi|2832648|emb|CAA16723.1| membrane-bound small GTP-binding - like protein [Arabidopsis
thaliana]
gi|7268636|emb|CAB78845.1| membrane-bound small GTP-binding-like protein [Arabidopsis
thaliana]
gi|38603932|gb|AAR24711.1| At4g18430 [Arabidopsis thaliana]
gi|44681422|gb|AAS47651.1| At4g18430 [Arabidopsis thaliana]
gi|297313828|gb|EFH44251.1| hypothetical protein ARALYDRAFT_493018 [Arabidopsis lyrata subsp.
lyrata]
gi|332658645|gb|AEE84045.1| RAB GTPase homolog A1E [Arabidopsis thaliana]
Length = 217
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 128/209 (61%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R V +D + IK Q+WDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDITR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDANVVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE F++ + F+E SA A NVE+AF +I + + ALD D
Sbjct: 130 LRHLRAVPTEEARSFSERENMFFMETSALDATNVEQAFTHVLTQIYRVMSRKALDGTGDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G D T + GCCS
Sbjct: 190 MSLPKGQTIDIGNKD--DVTAVKSSGCCS 216
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 126/168 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD LFK ++IGD+GVGK+CLL +F+D F TIG++F + V ++G+ IKLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE F +IT SYYRGA G +LVYDIT+ +TF++++ WL + ++HAN ++ ML+GNKC
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAKWLRNIQEHANEDVEKMLLGNKC 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
D+ +R ++K+ GE AKENG+ F+E SA+ NVE+AF+ AA IL+
Sbjct: 125 DMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILK 172
>gi|357446819|ref|XP_003593685.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355482733|gb|AES63936.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ FA+ F+E SA + NVE AF + +I + + + AL+ +D
Sbjct: 130 LRHLRAVSTEDSTAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ G+RD + ++ GCCS
Sbjct: 190 TALP----KGQTIDVGSRDDVSAVKKSGCCS 216
>gi|389640453|ref|XP_003717859.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|351640412|gb|EHA48275.1| Ras-like protein Rab-11A [Magnaporthe oryzae 70-15]
gi|440469695|gb|ELQ38797.1| GTP-binding protein ypt3 [Magnaporthe oryzae Y34]
gi|440479119|gb|ELQ59905.1| GTP-binding protein ypt3 [Magnaporthe oryzae P131]
Length = 211
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 134/208 (64%), Gaps = 2/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ +
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDSGDTP 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + G S + + ++ G CC
Sbjct: 186 SMPQT--GTNIALSNPTEDSAAKNGKCC 211
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +ETFN++ WL++ ++A N++ +LVGNKCD
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV + + +A + G+ FLE SA+++ NVE+AF+ A++I + G +
Sbjct: 127 LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRM--GPVQGAGGA 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G+++ +G++ + GGCC
Sbjct: 185 PGVRI--------TGSQPVQDKKSGGCC 204
>gi|293331631|ref|NP_001167800.1| uncharacterized protein LOC100381498 [Zea mays]
gi|297609251|ref|NP_001062887.2| Os09g0327100 [Oryza sativa Japonica Group]
gi|242048968|ref|XP_002462228.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|48716902|dbj|BAD23597.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|125563251|gb|EAZ08631.1| hypothetical protein OsI_30905 [Oryza sativa Indica Group]
gi|125605234|gb|EAZ44270.1| hypothetical protein OsJ_28889 [Oryza sativa Japonica Group]
gi|215701082|dbj|BAG92506.1| unnamed protein product [Oryza sativa Japonica Group]
gi|223944061|gb|ACN26114.1| unknown [Zea mays]
gi|241925605|gb|EER98749.1| hypothetical protein SORBIDRAFT_02g022140 [Sorghum bicolor]
gi|255678786|dbj|BAF24801.2| Os09g0327100 [Oryza sativa Japonica Group]
Length = 216
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 189 AAPPRGQTINVG--GKDDVSAVKKSGCCS 215
>gi|326489989|dbj|BAJ94068.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 216
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ + H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA A NVE+AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKAFAEREYTFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ RGQ + G++D + ++ GCCS
Sbjct: 189 AAPP----RGQTINVGSKDDVSAVKKAGCCS 215
>gi|326489368|dbj|BAK01667.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531904|dbj|BAK01328.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 215
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 137/215 (63%), Gaps = 15/215 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + I+G+ IK QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+++TF +++ WL + R HA+ N+ IM+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQTFENINRWLRELRDHADSNIVIMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G+ A++ GL FLE SA A NVE+AF + I Q I + AL A
Sbjct: 129 LNHLRSVPEEDGQALAEKEGLSFLETSALEALNVEKAFQTILSDIHQIISKKALAAQE-- 186
Query: 183 SGIKVGYGRGQGPS------GARDGTVSQRGGCCS 211
G GP D + + + GCCS
Sbjct: 187 -------AAGSGPPTQGTTINVADSSGNTKKGCCS 214
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +E+FN++ WL++ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV +++A + G+ FLE SA+++ NVE+AF+ AA+I + G +
Sbjct: 125 LTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRM--GPVQQAGTG 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+++G G P + + GGCC
Sbjct: 183 PSVRIG---GSQPVNEK-----KTGGCC 202
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAV + + FA E G+ FLE SA+ A NVE+AF+ AA+I + + A+N
Sbjct: 125 LTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRM--ASQPAMNSS 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V +GQ V Q+ GCCS
Sbjct: 183 RPATVQM-KGQ--------PVVQKSGCCS 202
>gi|409051612|gb|EKM61088.1| hypothetical protein PHACADRAFT_82471 [Phanerochaete carnosa
HHB-10118-sp]
Length = 239
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 102/187 (54%), Positives = 125/187 (66%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L KYIIIG+ G GKSCLL QFT F+ TIGVEF +R V + + IKLQ+WD
Sbjct: 15 TYDFLMKYIIIGEAGTGKSCLLHQFTHNSFKEHSQHTIGVEFSSRTVKLGEKRIKLQLWD 74
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGA+LVYDIT R +F +LS WL DAR +P++ +LVGNK
Sbjct: 75 TAGQERFRSVTRSYYRGAAGAILVYDITSRASFLNLSRWLADARALGSPHLVCVLVGNKA 134
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V E ++A EN + FLEAS+ T NVE F+ A IL I+ GALD
Sbjct: 135 DREEDREVEWAEASRWAAENDVHFLEASSLTGDNVEAPFLLCARSILLAIESGALDPEKA 194
Query: 182 QSGIKVG 188
SG+ G
Sbjct: 195 GSGVSYG 201
>gi|384500794|gb|EIE91285.1| GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 136/208 (65%), Gaps = 3/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGK+ LL +FT F TIGVEF R V +D + +K QIWDT
Sbjct: 7 YDYLFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKSQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + +T+ ++ WL++ R HA+ N+ +MLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSNIVVMLVGNKSD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE +QFA +NGL F+E SA + NVE AF + +I + + AL++ ND
Sbjct: 127 LRHLRAVPTEEAKQFAADNGLSFIETSALDSSNVELAFQRILTEIYRIVSNKALESSNDV 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
I+ G+ + + Q GGCC
Sbjct: 187 --IRPTAGQTINVNQPTEDE-KQGGGCC 211
>gi|256084393|ref|XP_002578414.1| rab15 13 10 1 35 5 and [Schistosoma mansoni]
Length = 355
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 134/207 (64%), Gaps = 13/207 (6%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYL K ++IGD+GVGKSCLLL+F D+ F + TIGV+F R + ++G+ +KLQIWDTA
Sbjct: 162 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTA 221
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYDIT + TF ++ SWL + +AN +S +LVGNKCDL
Sbjct: 222 GQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYANSTVSRLLVGNKCDL 281
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
A+RRAV ++FA +N + F+E SA+ A NVE AF+K A K IQE A N S
Sbjct: 282 ANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEK----IQENATPVQNMLS 337
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
V Q V + GGCC
Sbjct: 338 S-TVPVNSTQP--------VKKSGGCC 355
>gi|326492460|dbj|BAK02013.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326496423|dbj|BAJ94673.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 222
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R ++G+ IK QIWDT
Sbjct: 16 YDYLFKVVLIGDSGVGKSNLLSRFTKNTFSLDSKSTIGVEFATRTTQVEGKTIKAQIWDT 75
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++ WL++ R HA+ N+ IML+GNK D
Sbjct: 76 AGQERYRAITSAYYRGAVGALLVYDVTKAATFENVKRWLKELRDHADSNIVIMLIGNKTD 135
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V+ ++ FA+ GL F+E SA A NV++AF A+I + I + AL +
Sbjct: 136 LRHLRSVATDKAAGFAEWEGLSFIETSALDATNVDKAFQTVLAEIHRVISKKALTTEDSG 195
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G+ VG G+ SG +VS R CCS
Sbjct: 196 AGV-VGEGQSILVSGGEPTSVSSR--CCS 221
>gi|224086271|ref|XP_002307838.1| predicted protein [Populus trichocarpa]
gi|222853814|gb|EEE91361.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 135/210 (64%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GA LVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGAFLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV +E+G A++ GL FLE SA A N+E+AF +I I + L A
Sbjct: 129 LNHLRAVQEEDGHALAEKEGLSFLETSALEATNIEKAFQTILTEIYHIISKKTLAAQEAA 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ V GQG + D + + + GCCS
Sbjct: 189 ANSTVP---GQGTTINVADASGNTKKGCCS 215
>gi|367035076|ref|XP_003666820.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
gi|347014093|gb|AEO61575.1| hypothetical protein MYCTH_2140896 [Myceliophthora thermophila ATCC
42464]
Length = 213
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 131/208 (62%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + IDG+ IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQIDGKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +F +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKSLSFENVTRWLKELRDHADSNIVIMLVGNKTD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
H RAV E+G+ FA ENGL F+E SA A NV+ AF I Q + +L
Sbjct: 126 QRHLRAVPTEDGKNFASENGLSFIETSALEATNVDLAFQNILTSIYQIVSSKSLAEEGAD 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G K G S +++G + CC
Sbjct: 186 VGKKFDPREGNNISLSQEGAKKEDKSCC 213
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AG+E FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 153
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 154 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 213
Query: 183 SGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
S +K+ + V Q GGCC
Sbjct: 214 SNVKI-----------QSTPVKQSSGGCC 231
>gi|322786717|gb|EFZ13086.1| hypothetical protein SINV_00792 [Solenopsis invicta]
Length = 206
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 138/208 (66%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T +ETFN++ WLE+ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + G+ FLE SA+ A NVE+AF+ AA+I + + A +
Sbjct: 128 LHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDPA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +K+ +GR S + GCC
Sbjct: 188 NKVKIEHGR---------PIESSKSGCC 206
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 109/214 (50%), Positives = 141/214 (65%), Gaps = 8/214 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID-GRPIKLQIWD 61
YDYL+K ++IGD+GVGKS +L +FT F TIGVEF + V +D G+ IK QIWD
Sbjct: 8 YDYLYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDIT+R++F ++ WL++ R HA+PN+ I+LVGNK
Sbjct: 68 TAGQERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPNIVILLVGNKS 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAVS EE +FA L F+E SA A NVE+AF + A+I Q+ ++ N
Sbjct: 128 DLKHLRAVSVEEATKFANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIED-NP 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQ----RGGCCS 211
QS + GRGQ + T SQ R GCCS
Sbjct: 187 QSTTQP--GRGQKIHLDEERTDSQIRQSRRGCCS 218
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 133/209 (63%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDANIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + AL+ +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALESMNVENAFTEVLTQIYRVVSRKALEVGDDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +GQ + D + ++ GCCS
Sbjct: 190 GALP----KGQTINVKDDVSAVKKVGCCS 214
>gi|296477861|tpg|DAA19976.1| TPA: RAB4B, member RAS oncogene family [Bos taurus]
Length = 156
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 92/153 (60%), Positives = 119/153 (77%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQ 154
DL R V+ E +FA+EN L+FLE SA T +
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGE 156
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + IDG+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT++++F+ + WL + R HA+ N+ +M+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G F+++ GL FLE SA A NVE+AF ++I Q + + AL A Q
Sbjct: 129 LNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAA---Q 185
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ QG + + + +G CCS
Sbjct: 186 ASASTNGRSMQGTTINVAESSTVTKGSCCS 215
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ +NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 137/208 (65%), Gaps = 11/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ W+ + ++AN ++ MLVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWMNEIDRYANDKVNKMLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA + G+ FLE SA+ + NVE+AFI AA+I + + Q
Sbjct: 125 LTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQAPAPKSGGQ 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S I+VG G V ++ GCC
Sbjct: 185 S-IQVGAG----------AAVGEKKGCC 201
>gi|46109304|ref|XP_381710.1| hypothetical protein FG01534.1 [Gibberella zeae PH-1]
Length = 255
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 155/255 (60%), Gaps = 52/255 (20%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI------------ 50
+DY+ K + IGD+G GKS L ++ + RF P HD+TIGVEFG+R+V +
Sbjct: 6 WDYIAKLVCIGDSGCGKSSLTIRLCEGRFSPHHDVTIGVEFGSRIVPVGPPHSKPGALAA 65
Query: 51 -----------DGRP-------------IKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
DG P +KL +WDTAGQE+++S+TRSY+RGA+GALLV+
Sbjct: 66 ADGEDKDPETSDGLPEPPRDASSTPQKHMKLSLWDTAGQETYKSVTRSYFRGASGALLVF 125
Query: 87 DITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA----HRRAVSKEEGEQFAKENG 142
D++R++TF H++ WL D RQ A P++ ++LVGNK DL ++R V++EE E++AK NG
Sbjct: 126 DLSRKQTFQHVTDWLNDLRQIAEPDIVVILVGNKADLTQQEDNKREVTREEAEEWAKRNG 185
Query: 143 LL-FLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGAR-- 199
++ ++E SA++ +NVE AF++ A +I NIQ G D + +SG+K G G G R
Sbjct: 186 VMEYVETSAKSGENVENAFMRVAERIYNNIQAGKYDLNDRRSGVK-----GAGAGGNRQV 240
Query: 200 ----DGTVSQRGGCC 210
D + S G CC
Sbjct: 241 KLSGDASKSTGGMCC 255
>gi|353230109|emb|CCD76280.1| putative rab15, 13, 10, 1, 35, 5, and [Schistosoma mansoni]
Length = 218
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 103/207 (49%), Positives = 134/207 (64%), Gaps = 13/207 (6%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYL K ++IGD+GVGKSCLLL+F D+ F + TIGV+F R + ++G+ +KLQIWDTA
Sbjct: 25 DYLLKLLLIGDSGVGKSCLLLRFADETFNETYISTIGVDFKIRTIDLNGKVVKLQIWDTA 84
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYDIT + TF ++ SWL + +AN +S +LVGNKCDL
Sbjct: 85 GQERFRTITSSYYRGAQGIIIVYDITDQSTFANVQSWLHEISCYANSTVSRLLVGNKCDL 144
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
A+RRAV ++FA +N + F+E SA+ A NVE AF+K A K IQE A N S
Sbjct: 145 ANRRAVETSVAKEFADKNQMSFIETSAKDATNVENAFLKMAEK----IQENATPVQNMLS 200
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
V Q V + GGCC
Sbjct: 201 S-TVPVNSTQP--------VKKSGGCC 218
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 134/210 (63%), Gaps = 5/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ FA+ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 130 LRHLRAVTTEDATAFAERENTFFMETSALESLNVENAFTEVLTQIHRVVSRKALDVGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ + +GQ + G D + ++ GCCS
Sbjct: 190 AALP----KGQTITVGKDDVSAVKKVGCCS 215
>gi|148910011|gb|ABR18090.1| unknown [Picea sitchensis]
Length = 213
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 136/209 (65%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R V ++G+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTVQVEGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKPTTFENVGRWLKELRDHADSNIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R VS E+ + FA++ GL FLE SA A NVE AF A+I + I + AL A +
Sbjct: 129 LKHLRGVSTEDAQSFAEKEGLSFLETSALEATNVERAFQTILAEIHRIISKKAL-ASEEA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G + G+ + D + + CCS
Sbjct: 188 AGAGIKEGKTIVVA---DPDTNTKKACCS 213
>gi|409045619|gb|EKM55099.1| hypothetical protein PHACADRAFT_255474 [Phanerochaete carnosa
HHB-10118-sp]
Length = 236
Score = 199 bits (506), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 107/237 (45%), Positives = 148/237 (62%), Gaps = 31/237 (13%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI--DGRPIKLQ 58
+++ Y+ K+II GD VGKS LL++ TD+RF D T+GVEFG++++TI + + +KLQ
Sbjct: 4 VAWHYVLKFIITGDAAVGKSSLLIRLTDQRFLANPDPTLGVEFGSKLITIPEENKVVKLQ 63
Query: 59 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVG 118
WDTAG ESFRSITRSYYRGAAG LLVYD+T R++F + SWL+D R+HA+P+++ +LVG
Sbjct: 64 CWDTAGTESFRSITRSYYRGAAGCLLVYDVTSRQSFVNARSWLQDVREHADPHLTCILVG 123
Query: 119 NKCDLA-------------------------HRRAVSKEEGEQFAKENGLLFLEASARTA 153
NK DL +R VS EE E +A+E GLLF+E SA++
Sbjct: 124 NKVDLCLDEGPADPSQDPPPPPSDTLSKPGKRKREVSTEEAEIWAQEEGLLFVETSAKSG 183
Query: 154 QNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
NVE AF + IL+ +++GA D + G+K+ R G A D T S CC
Sbjct: 184 VNVEMAFERATRDILEKVRKGAFDE-DRSPGVKLSQSRTDGL--AVDTTASA-SRCC 236
>gi|255647659|gb|ACU24291.1| unknown [Glycine max]
Length = 216
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++ GD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLTGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+H RAVS+++G+ A+ GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LSHLRAVSEDDGQALAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAA 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
G + GQG + D + + + GCCS
Sbjct: 189 VGTTLP---GQGTTINVGDASGNTKRGCCS 215
>gi|357125866|ref|XP_003564610.1| PREDICTED: ras-related protein Rab11C-like [Brachypodium
distachyon]
Length = 216
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + IDG+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQIDGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLV+DIT+R+TF+++ WL + R HA+ N+ +M+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVFDITKRQTFDNVQRWLRELRDHADANIVVMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+ + F+++ L FLE SA A NVE+AF ++I Q + + AL A
Sbjct: 129 LNHLRSVPEEDSQAFSEKESLSFLETSALEAINVEKAFHTVLSEIHQIVSKKALAAQESA 188
Query: 183 SGIKVGYGRG-QGPS-GARDGTVSQRGGCCS 211
S GR QG + + + + +G CCS
Sbjct: 189 S----ANGRSMQGTTINVAEPSTNTKGSCCS 215
>gi|154296769|ref|XP_001548814.1| hypothetical protein BC1G_12412 [Botryotinia fuckeliana B05.10]
gi|347836050|emb|CCD50622.1| similar to ras-related protein Rab-2A [Botryotinia fuckeliana]
Length = 248
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 107/247 (43%), Positives = 152/247 (61%), Gaps = 41/247 (16%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV------------- 48
S+DY+ K + IGD+G GKS L ++ + RF P HD+TIGVEFG+R++
Sbjct: 5 SWDYIAKLVCIGDSGTGKSSLTIRLCEGRFSPHHDVTIGVEFGSRIIPVGPPNSEGFKPK 64
Query: 49 --TIDGRP---------------IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRR 91
T+D P +KL +WDTAGQE+++S+TRSY+RGA+GALLV+DI+RR
Sbjct: 65 SNTLDEEPAPQPSATESDVPQKHMKLSLWDTAGQETYKSVTRSYFRGASGALLVFDISRR 124
Query: 92 ETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA----HRRAVSKEEGEQFAKENGLL-FL 146
TF H++ WL D RQ A P++ ++LVGNK DLA ++R V+ EE E +AK NG+L ++
Sbjct: 125 PTFEHVTDWLHDLRQIAEPDIVVVLVGNKSDLATGEENKREVTVEEAEAWAKRNGVLEYV 184
Query: 147 EASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGARDGTVSQR 206
E SA++ + VE AF + A +I NI+ G D + +SG+K G G G S Q+
Sbjct: 185 ETSAKSGEGVENAFARVAERIYMNIEAGRYDLNDRRSGVK---GPGYGGSKTNVKLAPQK 241
Query: 207 ---GGCC 210
GGCC
Sbjct: 242 ASSGGCC 248
>gi|343470855|emb|CCD16567.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T E+FN++ SWL + + A+ +++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSWLSEIDKFASESVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++AV + ++FA G+ FLE SA+ A NVE+AF++ A +NI++
Sbjct: 125 LVTKKAVDTQMAQEFADSLGIPFLETSAKEAANVEKAFVEMA----KNIKKRVAAQGASS 180
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G S + T SQRGGCC
Sbjct: 181 GGAGSARPVLTGASRPANNTASQRGGCC 208
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 96/210 (45%), Positives = 136/210 (64%), Gaps = 6/210 (2%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGK+ LL +F F TIGVEF + + ID + +K QIWDTA
Sbjct: 13 DYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQIWDTA 72
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYD+T+R++F+H++ WLE+ R HA+ N+ IML+GNKCDL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKNIVIMLIGNKCDL 132
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
RAV E+ ++FA+ L F+E SA A NVE AF+ +I + I + +L A +D +
Sbjct: 133 GSLRAVPTEDAQEFAQRENLFFMETSALEATNVETAFLTILTEIYRIISKKSLTADDDDA 192
Query: 184 GIKVGYGRGQG---PSGARDGTVSQRGGCC 210
+G PS G +RGGCC
Sbjct: 193 DGNSSLLKGTRIIIPSEQESG---KRGGCC 219
>gi|449551110|gb|EMD42074.1| hypothetical protein CERSUDRAFT_110626 [Ceriporiopsis subvermispora
B]
Length = 240
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 100/187 (53%), Positives = 126/187 (67%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L KYI+IG+ G GKSCLL FT F+ TIGVEF +R V + + IKLQ+WD
Sbjct: 15 TYDFLMKYIVIGEAGTGKSCLLHHFTHNSFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 74
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGA+LVYDIT R++F +LS WL DAR A+P++ +LVGNK
Sbjct: 75 TAGQERFRSVTRSYYRGAAGAILVYDITSRQSFLNLSRWLADARALASPHLVTVLVGNKA 134
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V E ++A EN + FLEAS+ T NVE F+ A IL I+ G+LD
Sbjct: 135 DREEDREVEWAEASRWAAENDVHFLEASSLTGDNVEAPFLLCARSILLAIESGSLDPEKA 194
Query: 182 QSGIKVG 188
SG+ G
Sbjct: 195 GSGVSYG 201
>gi|449543390|gb|EMD34366.1| hypothetical protein CERSUDRAFT_117145 [Ceriporiopsis subvermispora
B]
Length = 212
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
++DYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NFDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL H RAV +E + FA EN L F+E SA A NVE AF I + + +L+ D
Sbjct: 126 DLKHLRAVPTDEAKAFAAENALSFIETSALDASNVESAFQTILTDIYRIVSSKSLEQSAD 185
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK G S + D Q G CC
Sbjct: 186 P--IKPPTGDSITVSPSVDTNQQQGGKCC 212
>gi|388497686|gb|AFK36909.1| unknown [Lotus japonicus]
Length = 217
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKSQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGALGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS E+G+ + ++ L F+E SA A NVE AF + +I + + A++ +
Sbjct: 130 LRHLVAVSTEDGKSYTEKESLYFIETSALEASNVENAFAEVLTQIYNVVSKKAVEGA--E 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G +G+ D + +R GCCS
Sbjct: 188 NGTASVPAKGEKIDLKNDVSALKRVGCCS 216
>gi|224109432|ref|XP_002315193.1| predicted protein [Populus trichocarpa]
gi|222864233|gb|EEF01364.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 135/209 (64%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLDSKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IML GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVRRWLRELRDHADSNIVIMLAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+VS E+ + A++ GL FLE SA A NVE+AF I Q I + AL A +
Sbjct: 129 LNHLRSVSAEDAQTLAEKEGLSFLETSALEASNVEKAFQTILLDIYQIISKKALTA--QE 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G +G + A + + CCS
Sbjct: 187 AANSTGLPQGTTITIANLSSNINKRACCS 215
>gi|303319221|ref|XP_003069610.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|240109296|gb|EER27465.1| Ras-related protein Rab-11B , putative [Coccidioides posadasii C735
delta SOWgp]
gi|320040974|gb|EFW22907.1| ras GTPase Rab11 [Coccidioides posadasii str. Silveira]
gi|392865267|gb|EAS31048.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 210
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 104/213 (48%), Positives = 134/213 (62%), Gaps = 13/213 (6%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKSQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ +++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVTRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD----A 178
L H RAV EE +QFA +N L F+E SA A NVE AF +I + + ALD A
Sbjct: 126 LRHLRAVPTEEAKQFASDNNLSFIETSALDASNVELAFQNILTEIFRIVSSKALDSGDSA 185
Query: 179 VNDQSGIK-VGYGRGQGPSGARDGTVSQRGGCC 210
N S K V + Q P + GCC
Sbjct: 186 QNPLSDRKVVEITKTQDPES--------KQGCC 210
>gi|303744|dbj|BAA02113.1| GTP-binding protein [Pisum sativum]
gi|452361|emb|CAA82709.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738937|prf||2001457E GTP-binding protein
gi|1098295|prf||2115367C small GTP-binding protein
Length = 217
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 134/210 (63%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLNVDSKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHATFENVDRWLKELRNHTDSNIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD-AVND 181
L H AVS E+G+ +A++ L F+E SA A NVE AF + +I + + ++ A N
Sbjct: 130 LRHLVAVSTEDGKSYAEKESLYFMETSALEATNVENAFAEVLTQIYHIVSKKTVEGAENG 189
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G+ D + +R GCCS
Sbjct: 190 NASVP---AKGEKIDLKNDVSALKRVGCCS 216
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|224121856|ref|XP_002330670.1| predicted protein [Populus trichocarpa]
gi|222872274|gb|EEF09405.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 132/210 (62%), Gaps = 5/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTESNIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ FA+ F+E SA + NVE AF + +I + ALD +D
Sbjct: 130 LRHLRAVTTEDATAFAEREKTFFMETSALESLNVENAFTEVLTQIYHVVSRKALDVGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ + +GQ + G D + ++ GCCS
Sbjct: 190 AALP----KGQTINVGKDDVSAVKKVGCCS 215
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ FA+ F+E SA + NVE AF + +I + + AL+ +D
Sbjct: 130 LRHLRAVSTEDARTFAERENTFFMETSALESLNVENAFTEVLTQIYHVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++ GCCS
Sbjct: 190 AALP----KGQTINVGSRDDVSAVKKSGCCS 216
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITESRSKKTSFFR 203
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 13/209 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD LFK ++IGD+GVGK+C+L +F+D F TIG++F + V + G+ IKLQIWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE F +IT SYYRGA G +LVYDIT+ +TF++++ WL + +HAN ++ ML+GNKC
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKWLRNIDEHANEDVERMLLGNKC 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R + KE GE A+E+G+ FLE SA++ NVE+AF+ A IL+ + D+ D
Sbjct: 125 DMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQK--DSNPD 182
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + V T S++ GCC
Sbjct: 183 SSSVSV-----------HKETSSRKSGCC 200
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 199 bits (506), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 137/208 (65%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y YLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + S GGCC
Sbjct: 188 SNVNI----------QSTPVKSSSGGCC 205
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 140/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E+ + FA E G+ F+E SA+ A NVE+AF+ +A I + + A+N+
Sbjct: 125 LTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRM--ASQPAMNNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V + +GQ V Q+GGCCS
Sbjct: 183 KPSTVQF-KGQ--------PVEQKGGCCS 202
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 137/209 (65%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ +++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDSVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA RAV E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A N+
Sbjct: 125 LAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRM--ASQPAANNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+ GCCS
Sbjct: 183 RPPTVQI-RGQ--------PVPQKNGCCS 202
>gi|224061286|ref|XP_002300408.1| predicted protein [Populus trichocarpa]
gi|118482455|gb|ABK93150.1| unknown [Populus trichocarpa]
gi|222847666|gb|EEE85213.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIRVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IM VGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVIMFVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + ALD +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENTYFMETSALESLNVENAFTEVLTQIYHVVSRKALDIGDDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G+ + D + ++ GCCS
Sbjct: 190 AALP----KGETINVKDDVSAVKKVGCCS 214
>gi|414885034|tpg|DAA61048.1| TPA: hypothetical protein ZEAMMB73_722788 [Zea mays]
Length = 323
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 116 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 175
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 176 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 235
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + + ALD +D
Sbjct: 236 LRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDP 295
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 296 AAPPRGQTINVG--GKDDVSAVKKSGCCS 322
>gi|212723418|ref|NP_001131787.1| uncharacterized protein LOC100193158 [Zea mays]
gi|194692530|gb|ACF80349.1| unknown [Zea mays]
gi|414589339|tpg|DAA39910.1| TPA: hypothetical protein ZEAMMB73_058303 [Zea mays]
Length = 216
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKGFAEREMTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 189 AAPPRGQTINVG--GKDDVSAVKKAGCCS 215
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 141/209 (67%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+ ++ VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + ++
Sbjct: 125 LSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSARPA 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ V+Q+ GCCS
Sbjct: 185 T-VQI---RGQ--------PVNQKAGCCS 201
>gi|357445241|ref|XP_003592898.1| Ras-related protein RABA2a [Medicago truncatula]
gi|92893896|gb|ABE91946.1| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355481946|gb|AES63149.1| Ras-related protein RABA2a [Medicago truncatula]
Length = 220
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 101/212 (47%), Positives = 139/212 (65%), Gaps = 7/212 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 12 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 71
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF++++ WL++ R HA+ N+ IML+GNK D
Sbjct: 72 AGQERYRAITSAYYRGALGALLVYDVTKPTTFDNVTRWLKELRDHADANIVIMLIGNKTD 131
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE+AF T +I + I + +L N+
Sbjct: 132 LKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTTLGEIYRIISKKSLSTANEP 191
Query: 183 SG---IKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ IK G G S T + CC+
Sbjct: 192 AAAANIKEGKTIAIGGS----ETTNTNKPCCT 219
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|452357|emb|CAA82708.1| guanine nucleotide regulatory protein [Vicia faba]
gi|1098294|prf||2115367B small GTP-binding protein
Length = 207
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 137/210 (65%), Gaps = 6/210 (2%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDTA
Sbjct: 1 DYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK DL
Sbjct: 61 GQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKADL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
H RAVS E+ FA+ F+E SA + NVE AF + +I + + + AL+ +D +
Sbjct: 121 RHLRAVSTEDSTAFAERENTFFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDPA 180
Query: 184 GIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ +GQ + G+RD + ++GGCCS
Sbjct: 181 ALP----KGQTINVGSRDDVSAVKKGGCCS 206
>gi|413946075|gb|AFW78724.1| ras protein RIC2 [Zea mays]
Length = 220
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 14 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF+++ WL + R H + ++ +MLVGNK D
Sbjct: 74 AGQERYRAITSAYYRGAVGALLVYDVTRRATFDNVGRWLRELRDHTDQSIVVMLVGNKSD 133
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS ++ ++FA+ + F+E SA A NV+ +F + +I Q + + ++A +
Sbjct: 134 LRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEASEEG 193
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G+G+ + D + +R GCCS
Sbjct: 194 AAAP---GKGEKINVKDDVSAMKRVGCCS 219
>gi|224116364|ref|XP_002331964.1| predicted protein [Populus trichocarpa]
gi|222874741|gb|EEF11872.1| predicted protein [Populus trichocarpa]
Length = 217
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANNVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + FA+ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 130 LRHLRAVATEDAKGFAERESTFFMETSALESMNVENAFTEVLTQIYRVVSRKALDVGDDS 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++ GCCS
Sbjct: 190 TYLP----KGQTINVGSRDDVSAVKKAGCCS 216
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 136/208 (65%), Gaps = 11/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T +E+FN++ +WLE+ ++A N++ +LVGNKCD
Sbjct: 70 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKTWLEEIERYACENVNKLLVGNKCD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++A + G+ FLE SA+ A NVE+AF+ AA+I + + A
Sbjct: 130 LQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVGPPS-SAAEAP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ R +V + GCC
Sbjct: 189 SAVKIDKSR----------SVESKSGCC 206
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 143/212 (67%), Gaps = 16/212 (7%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R ++++ + +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T R++F+++ W+++ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R V+ +EG + A +G+ F+E SA+ A NVE+AF A +I + +Q VN Q
Sbjct: 125 LVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQ------VNSQ 178
Query: 183 SGIKVGYGRG---QGPSGARDGTVSQRGGCCS 211
+ RG QGP A + Q GGCCS
Sbjct: 179 N------TRGSAQQGPKLAGAQPIRQ-GGCCS 203
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 104/209 (49%), Positives = 137/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F+D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS E + FA G+ F+E SA+ A NVE+AF+ A I + A N+
Sbjct: 125 LEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASIKDRM---ASQPANNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+GGCCS
Sbjct: 182 RPPTVQI-RGQ--------PVAQKGGCCS 201
>gi|417397071|gb|JAA45569.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 205
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 136/209 (65%), Gaps = 22/209 (10%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT AR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITX-------------ARMLASQNIVIILCGNKK 115
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 116 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 175
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 176 GSGIQYGDAALRQLRSPRRAQAPSAQECG 204
>gi|399163177|gb|AFP33164.1| rab family member, partial [Caenorhabditis elegans]
Length = 202
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 125/173 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
S D++FKY+IIGD GVGKS LLL+F K F +H T+G+EFG R + ID + +KL +WD
Sbjct: 1 SSDHVFKYVIIGDRGVGKSNLLLRFIGKPFDSIHPSTLGIEFGFRNLEIDRKKVKLHVWD 60
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
T GQE FRS+ SYYR A GALLVYDIT RE+F HL WL D ++ +P++ I+L+GNK
Sbjct: 61 TCGQERFRSLVGSYYRHAIGALLVYDITSRESFYHLEHWLTDLQRLGDPDIVIVLIGNKS 120
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEG 174
DL R V KEEGE FA+E GL+F+E SA+T + VEEAF+ +A +I + + G
Sbjct: 121 DLEADREVRKEEGEAFAREFGLIFMEISAKTNEYVEEAFVNSAHEIYRKLNFG 173
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 141/209 (67%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+ ++ VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + ++
Sbjct: 125 LSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSAR-P 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ V+Q+ GCCS
Sbjct: 184 ATVQI---RGQ--------PVNQKAGCCS 201
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 134/209 (64%), Gaps = 7/209 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYL K ++IGD+GVGKSCLLL+F+D F TIG++F R + +DG+ IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQIWDT 71
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N++ +LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 123 L-AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
+ +RAV +G+ A E G+ F EASA+T NVEE F A I Q + E D+ +
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFEASAKTNMNVEEVFFSIAKDIKQRLAE--TDSKTE 189
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK+ Q GA SQ+ CC
Sbjct: 190 PQTIKI----NQQEQGAGTSAASQKSACC 214
>gi|408399964|gb|EKJ79053.1| hypothetical protein FPSE_00801 [Fusarium pseudograminearum CS3096]
Length = 255
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 105/255 (41%), Positives = 154/255 (60%), Gaps = 52/255 (20%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI------------ 50
+DY+ K + IGD+G GKS L ++ + RF P HD+TIGVEFG+R+V +
Sbjct: 6 WDYIAKLVCIGDSGCGKSSLTIRLCEGRFSPHHDVTIGVEFGSRIVPVGPPHSKPGALAA 65
Query: 51 -----------DGRP-------------IKLQIWDTAGQESFRSITRSYYRGAAGALLVY 86
DG P +KL +WDTAGQE+++S+TRSY+RGA+GALLV+
Sbjct: 66 ADGEDKDPETSDGLPEPPRDASSTPQKHMKLSLWDTAGQETYKSVTRSYFRGASGALLVF 125
Query: 87 DITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA----HRRAVSKEEGEQFAKENG 142
D++R++TF H++ WL D RQ A P++ ++LVGNK DL ++R V++EE E++AK NG
Sbjct: 126 DLSRKQTFQHVTDWLNDLRQIAEPDIVVILVGNKADLTQQEDNKREVTREEAEEWAKRNG 185
Query: 143 LL-FLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIKVGYGRGQGPSGAR-- 199
++ ++E SA++ +NVE AF++ A +I NIQ G D + +SG+K G G G R
Sbjct: 186 VMEYVETSAKSGENVENAFMRVAERIYNNIQAGKYDLNDRRSGVK-----GAGAGGNRQV 240
Query: 200 ----DGTVSQRGGCC 210
D S G CC
Sbjct: 241 KLSGDANKSTGGMCC 255
>gi|238483611|ref|XP_002373044.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|220701094|gb|EED57432.1| Ras GTPase Rab11, putative [Aspergillus flavus NRRL3357]
gi|391870993|gb|EIT80162.1| GTPase Rab11/YPT3, small G protein superfamily [Aspergillus oryzae
3.042]
Length = 211
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 124/176 (70%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD+
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 143/209 (68%), Gaps = 10/209 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R +T++ + +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T R++F+++ W+++ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQWIQEIDRYAMENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R V+ +EG++ A G+ F+E SA+ A NVE+AF A +I + +Q +N+Q
Sbjct: 125 LVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQ------LNNQ 178
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V QGP A + Q GGCC+
Sbjct: 179 NTKGV---TQQGPKLAGAQPIRQ-GGCCA 203
>gi|302771275|ref|XP_002969056.1| rab family GTPase [Selaginella moellendorffii]
gi|302822422|ref|XP_002992869.1| rab family GTPase [Selaginella moellendorffii]
gi|300139317|gb|EFJ06060.1| rab family GTPase [Selaginella moellendorffii]
gi|300163561|gb|EFJ30172.1| rab family GTPase [Selaginella moellendorffii]
Length = 216
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 139/210 (66%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTIQVDGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT++ T+ ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKQATYENVERWLKELRDHADSNIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R V+ ++ ++F+++ GL F+E SA A NVE+AF +I + + + AL + +
Sbjct: 129 LKHLRGVATDDAQRFSEKEGLSFIETSALEATNVEKAFQSILTEIYRIVSKKALAS---E 185
Query: 183 SGIKVGYGRGQG-PSGARDGTVSQRGGCCS 211
+ VG G G+ G +++ CCS
Sbjct: 186 DPVLVGPGEGKAIIVGPEQDANTKKKACCS 215
>gi|414885033|tpg|DAA61047.1| TPA: hypothetical protein ZEAMMB73_722788, partial [Zea mays]
Length = 240
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 33 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 92
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 93 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELRDHTDANIVIMLVGNKAD 152
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE AF + +I + + + ALD +D
Sbjct: 153 LRHLRAVSVEDAKGFAERESTFFMETSALESMNVESAFTEVLTQIYRVVSKKALDIGDDP 212
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ GCCS
Sbjct: 213 AAPPRGQTINVG--GKDDVSAVKKSGCCS 239
>gi|323455162|gb|EGB11031.1| hypothetical protein AURANDRAFT_22559 [Aureococcus anophagefferens]
Length = 208
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 95/169 (56%), Positives = 126/169 (74%), Gaps = 2/169 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGRPIKLQIW 60
S +LFKYIIIGDT VGKS ++L FT++ FQ HD+TIGVEF +R V + DG L+IW
Sbjct: 8 SAPHLFKYIIIGDTEVGKSSIMLMFTEQHFQQAHDMTIGVEFDSRSVQLSDGNQANLEIW 67
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHA-NPNMSIMLVGN 119
DTAGQES+ SITRSYYRG LLVYD+TRRE+F+HL WL +A+Q+A NPN+ +MLVGN
Sbjct: 68 DTAGQESYLSITRSYYRGTDCCLLVYDVTRRESFDHLPRWLNEAKQNASNPNLVLMLVGN 127
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKIL 168
K DL R +S+ EG+ FA +G+LF+E +A+ VE F+++A ++L
Sbjct: 128 KADLEGSRQISRAEGKAFADLHGMLFVELTAKNQNLVESVFVESAQRVL 176
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 134/209 (64%), Gaps = 8/209 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYL K ++IGD+GVGKSCLLL+F+D F TIG++F R + +DG+ IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N++ +LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 123 LAH-RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
+ +RAV +G+ A E G+ F E SA+T NVE+ F A I Q + E D+ +
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAE--TDSKTE 189
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
IK+ P G + T SQ+ CC
Sbjct: 190 DRTIKI-----NKPEGDAEATTSQKSACC 213
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 140/210 (66%), Gaps = 12/210 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI-QEGALDAVND 181
LA R VS E G+ A + G+ FLE SA+ A NVE+AF+ A +I + + A +
Sbjct: 125 LAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEIKNRMASQPAASGASR 184
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +++ RGQ VSQ+ CCS
Sbjct: 185 PATVQM---RGQ--------PVSQQSSCCS 203
>gi|51243763|gb|AAT99574.1| rab GTP-binding protein [Triticum aestivum]
Length = 216
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 138/211 (65%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL++ + H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLKELKDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA + NVE+AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVSVEDAKAFAEREYTFFMETSALESMNVEDAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ RGQ + G++D + ++ GCCS
Sbjct: 189 AAPP----RGQTINVGSKDDVSAVKKAGCCS 215
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 199 bits (505), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + ++G+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +E+FN++ WL++ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RRAV +++A + G+ FLE SA+++ NVE+AF+ A++I + G + V
Sbjct: 128 LIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRM--GPIQQVGTG 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+++G G P + + GGCC
Sbjct: 186 PSVRIG---GSQPVNEK-----KSGGCC 205
>gi|358249314|ref|NP_001240030.1| uncharacterized protein LOC100797258 [Glycine max]
gi|255645100|gb|ACU23049.1| unknown [Glycine max]
Length = 217
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADANIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE AF A+I + I + +L + ND
Sbjct: 129 LKHLRAVATEDAQGYAEKEGLSFIETSALEATNVENAFQTILAEIYRIISKKSLSS-NDP 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G+ GA + + + CC+
Sbjct: 188 AANIIKEGKTITVGGAPEPN-TNKPSCCT 215
>gi|302837804|ref|XP_002950461.1| RabA/Rab11 [Volvox carteri f. nagariensis]
gi|300264466|gb|EFJ48662.1| RabA/Rab11 [Volvox carteri f. nagariensis]
Length = 219
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 105/218 (48%), Positives = 139/218 (63%), Gaps = 16/218 (7%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV---TIDGRPIKLQI 59
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + T+DG+ IK QI
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQAGTVDGKTIKAQI 68
Query: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGN 119
WDTAGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA+ N+ IMLVGN
Sbjct: 69 WDTAGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADANIVIMLVGN 128
Query: 120 KCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAV 179
K DL H R V E + F + GL F+E SA + NVE+AF + +I + + LD+
Sbjct: 129 KSDLKHLRDVQTEVAQAFCEREGLSFIETSALDSTNVEKAFQQILTEIYHIVSKKVLDSE 188
Query: 180 NDQSGIKVGYGRG------QGPSGARDGTVSQRGGCCS 211
+++ K+G GR Q GA+ ++GGCCS
Sbjct: 189 DNRP--KIGEGRDLIVIDKQHDDGAK-----KKGGCCS 219
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 141/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + ++G+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +E+FN++ WL++ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RRAV +++A + G+ FLE SA+++ NVE+AF+ A++I + G + V
Sbjct: 128 LIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRM--GPIQQVGTG 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+++G G P + + GGCC
Sbjct: 186 PSVRIG---GSQPVNEK-----KSGGCC 205
>gi|307198018|gb|EFN79078.1| Ras-related protein Rab-1A [Harpegnathos saltator]
Length = 206
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 138/208 (66%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T +ETFN++ WLE+ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + G+ FLE SA+ A NVE+AF+ AA+I + + A +
Sbjct: 128 LHTKKVVDYTIAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDPA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +K+ +GR S + GCC
Sbjct: 188 NKVKIEHGR---------PIESSKSGCC 206
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 96/214 (44%), Positives = 142/214 (66%), Gaps = 19/214 (8%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYL K ++IGD+GVGKSCLLL+F+D F P TIG++F R + +DG+ IKLQIWD
Sbjct: 8 SYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 67
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LL YD+T +FN++ +W+ + QHA+ ++ +L+GNKC
Sbjct: 68 TAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRNWIRNIEQHASEGVNKILIGNKC 127
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ ++ +SKE+G+ A E+G+ FLE SA++ VEEAF A ++I++ +D +
Sbjct: 128 DILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLA----RDIKKRLIDTAQE 183
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRG-----GCC 210
++ +K A + V+Q+G GCC
Sbjct: 184 KTDLKT----------AGNVNVNQKGNAATAGCC 207
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 136/211 (64%), Gaps = 5/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++ GD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANTVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RA+S EE + FA+ F+E SA A NVE AF + +I + + + ALDA +D
Sbjct: 130 LNHLRAISTEEVKDFAERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDAGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ +GQ + G+RD + ++ GCC+
Sbjct: 190 T---TALPKGQMINVGSRDDVSAVKKSGCCA 217
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + A N+
Sbjct: 125 LADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKNRM---ASQPSNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKSGCCS 201
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + ++G+ IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T E+FN++ +WL + + A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDATDMESFNNVKTWLSEIDKFASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++AV + ++FA G+ FLE SA+ A NVEEAF++ A I + + ++ +
Sbjct: 125 LVTKKAVDTQMAKEFADSLGIPFLETSAKEASNVEEAFVRMATDIKKRVAAQGANSGSGG 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
K G P+GA +GGCC
Sbjct: 185 PNSKPLLSGGNKPAGAS----GNKGGCC 208
>gi|356569037|ref|XP_003552713.1| PREDICTED: ras-related protein Rab11C-like [Glycine max]
Length = 217
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF ++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFENVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS ++ + A+ L FLE SA A NVE+AF I Q + + AL A
Sbjct: 129 LNHLRAVSTDDAQNLAEREALSFLETSALEAFNVEKAFQTILFDIYQIMSKKALAAQGAA 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
S + +G S G+V ++ CCS
Sbjct: 189 STTSLPHGTTINVSNM-SGSVEKKSACCS 216
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 94/197 (47%), Positives = 131/197 (66%), Gaps = 1/197 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K ++IGD+GVGKSC LL+F++ F P TIG++F R + +DG+ +KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W + QHA ++ +L+GNKC
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFANVEQHATEGVNKILIGNKC 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQE-GALDAVN 180
D +RAVSKE+G+ A E G+ FLE SA+ N+EEAF A I + I + + +A
Sbjct: 126 DWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDIKKRIIDTSSKEASG 185
Query: 181 DQSGIKVGYGRGQGPSG 197
SG+ V G G G
Sbjct: 186 GSSGVNVADNSGSGSGG 202
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +++FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA++A NVE+AF+ AA+I + A +N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRM---ATQPMNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVNQKSGCCS 201
>gi|258589865|gb|ACV82919.1| RabA2 [Phaseolus vulgaris]
Length = 216
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/210 (47%), Positives = 138/210 (65%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L+H RAV +++G+ A+ GL FLE SA A N+E+AF +I + + AL A
Sbjct: 129 LSHLRAVYEDDGQNLAEREGLSFLETSALEATNIEKAFQTILTEIYHIVSKKALAAQEAG 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
G + GQG + D + + + GCCS
Sbjct: 189 VGTTLP---GQGTTINVGDASGNTKRGCCS 215
>gi|302807861|ref|XP_002985624.1| rab family GTPase [Selaginella moellendorffii]
gi|300146533|gb|EFJ13202.1| rab family GTPase [Selaginella moellendorffii]
Length = 220
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/213 (45%), Positives = 139/213 (65%), Gaps = 7/213 (3%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGKS LL +F F TIGVEF R +++DG+ IK QIWDTA
Sbjct: 9 DYVFKVVLIGDSAVGKSQLLSRFARDEFTLESKSTIGVEFQTRTISVDGKTIKAQIWDTA 68
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYDITR++TF H++ WLE+ R HA+ N+ IM+VGNK DL
Sbjct: 69 GQERYRAVTSAYYRGAVGAMLVYDITRKQTFEHVARWLEELRNHADNNVVIMMVGNKSDL 128
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ R +S EEG +F+++ GL F+E SA + NVE AF +I + + + +L A +
Sbjct: 129 SNSRTMSVEEGREFSEKEGLYFMETSALDSTNVETAFTTVLTEIYKIVSKKSLAADDPNG 188
Query: 184 GIKVGYGRGQGPSGAR-----DGTVSQRGGCCS 211
G+ PSG + + T ++ CCS
Sbjct: 189 GL--ANVMPPVPSGNKILLDDELTAVKKRACCS 219
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 135/211 (63%), Gaps = 16/211 (7%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++ YD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ VS E + FA E G+ FLE SA+ A NVEEAF+ A I +
Sbjct: 125 LTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAI--------------K 170
Query: 183 SGIKVGYGRGQGPSGA--RDGTVSQRGGCCS 211
+ + G PS R V+Q+ GCCS
Sbjct: 171 TRMASQPAGGSKPSTVQIRGQPVNQQSGCCS 201
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 93/197 (47%), Positives = 141/197 (71%), Gaps = 5/197 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+C+L +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASADVEKMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTA----AKILQNIQEGALD 177
D+ RR V+KE+GE+ A E G+ F+E SA++A NVEEAF A AK+ + +QE +
Sbjct: 124 DMNDRRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKMEKRLQEASNP 183
Query: 178 AVNDQSGIKVGYGRGQG 194
+D+ G ++G G+G
Sbjct: 184 PRHDR-GHQLGKDDGRG 199
>gi|317139974|ref|XP_001817889.2| Ras-related protein Rab-11A [Aspergillus oryzae RIB40]
Length = 211
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/176 (53%), Positives = 124/176 (70%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDTKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD+
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALDS 181
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 125/179 (69%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGKS LL +F F TIGVEF R + ID + +K QIWDTA
Sbjct: 13 DYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTA 72
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYDIT+R+TF+H++ WLE+ R HA+ N+ IML+GNKCDL
Sbjct: 73 GQERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ RAV E+ +FA+ GL FLE SA A NVE AF+ I + I + AL A +DQ
Sbjct: 133 GNLRAVPIEDAREFAQREGLFFLETSALEAINVESAFLTVLTDIYRIISKKALIANDDQ 191
>gi|145229443|ref|XP_001389030.1| Ras-related protein Rab-11A [Aspergillus niger CBS 513.88]
gi|134055135|emb|CAK37081.1| unnamed protein product [Aspergillus niger]
gi|350638153|gb|EHA26509.1| hypothetical protein ASPNIDRAFT_205975 [Aspergillus niger ATCC
1015]
gi|358366919|dbj|GAA83539.1| Ras GTPase Rab11 [Aspergillus kawachii IFO 4308]
Length = 211
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 123/175 (70%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD 177
L H RAV EE +QFA EN L F+E SA A NVE AF +I + + ALD
Sbjct: 126 LRHLRAVPTEEAKQFASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALD 180
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 137/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ F++ F+E SA + NVE AF + +I + + + AL+ +D
Sbjct: 130 LRHLRAVSTEDATSFSERENTYFMETSALESLNVESAFTEVLTQIYRVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++ GCCS
Sbjct: 190 AALP----KGQTINVGSRDDVSAVKKAGCCS 216
>gi|344303781|gb|EGW34030.1| GTP-binding protein YPT32/YPT11 [Spathaspora passalidarum NRRL
Y-27907]
Length = 222
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 138/213 (64%), Gaps = 7/213 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y+YL+K ++IGD+GVGKS LL +FT F TIGVEF R + IDG+ +K QIWDT
Sbjct: 12 YEYLYKIVLIGDSGVGKSNLLSRFTRDEFNLESRSTIGVEFATRTLEIDGKRVKAQIWDT 71
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDI + E++ +S WL++ ++HA+ N+ I LVGNK D
Sbjct: 72 AGQERYRAITSAYYRGAVGALIVYDIAKTESYESVSRWLKELKEHADSNIVIELVGNKSD 131
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA+EN LLF+EASA ++ NV+ +F + I + I + LD N+Q
Sbjct: 132 LDHLRAVPTEEAKNFAQENNLLFIEASALSSDNVDLSFHQLLKNIYEMISKHQLD-TNEQ 190
Query: 183 SGIKVGYGRGQGPS-----GARDGTVSQRGGCC 210
G+ G GP+ + GGCC
Sbjct: 191 GGVNKPTTAG-GPTISLTPAPQSKKNKNNGGCC 222
>gi|226492842|ref|NP_001148331.1| LOC100281941 [Zea mays]
gi|195617868|gb|ACG30764.1| ras-related protein RIC2 [Zea mays]
Length = 220
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 14 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLQVDGKVIKAQIWDT 73
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF+++ WL + R H + ++ +MLVGNK D
Sbjct: 74 AGQERYRAITSAYYRGAVGALLVYDVTRRTTFDNVGRWLRELRDHTDQSIVVMLVGNKSD 133
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AVS ++ ++FA+ + F+E SA A NV+ +F + +I Q + + ++ +
Sbjct: 134 LRHLVAVSTDDAKEFAEAESMYFMETSALDATNVDSSFSEVLTQIYQIVSKKTVEVPEEG 193
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ V G+G+ + D + +R GCCS
Sbjct: 194 A---VAPGKGEKINVKDDVSAMKRVGCCS 219
>gi|116784406|gb|ABK23331.1| unknown [Picea sitchensis]
Length = 222
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 136/215 (63%), Gaps = 13/215 (6%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DY+FK ++IGD+ VGKS +L +F F TIGVEF R + ID + IK QIWDTA
Sbjct: 13 DYMFKVVVIGDSAVGKSQILSRFAKNEFSLDSKSTIGVEFQTRTIAIDNKTIKTQIWDTA 72
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R++T +YYRGA GA+LVYDIT+R++F+H++ WLE+ R HA+ N+ IML+GNKCDL
Sbjct: 73 GQERYRAVTSAYYRGALGAMLVYDITKRQSFDHVARWLEELRGHADNNIVIMLIGNKCDL 132
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ- 182
RAV +E+ ++FA+ GL F E SA A NVE AFI +I + + AL A ++
Sbjct: 133 RDMRAVPEEDAKEFAQREGLFFFETSALEAINVETAFITALTEIYRIVSRKALTANEEER 192
Query: 183 -------SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+G K+ + P TV +R CC
Sbjct: 193 NGNAAALTGTKIALSSPEQPV----MTVKKR-SCC 222
>gi|343475422|emb|CCD13178.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 208
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLDGKVIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T E+FN++ SWL + + A+ +++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVKSWLSEIDKFASESVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++AV + ++FA G+ FLE SA+ A NVE+AF++ A +NI++
Sbjct: 125 LVTKKAVDTQMAQEFADSLGIPFLETSAKEAANVEKAFVEMA----KNIKKRVAAQGASS 180
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G S + T SQ+GGCC
Sbjct: 181 GGAGSARPVLTGASRPANNTASQKGGCC 208
>gi|432958666|ref|XP_004086097.1| PREDICTED: ras-related protein Rab-11A-like isoform 2 [Oryzias
latipes]
Length = 210
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/195 (51%), Positives = 128/195 (65%), Gaps = 5/195 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSNIVIMLVGNKSD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALD-AVND 181
L H RAV +E FA++NGL FLE SA + NVE AF IL Q LD + D
Sbjct: 128 LRHLRAVPTDEARAFAEKNGLSFLETSALDSTNVETAF----QTILTEEQRPTLDWRIED 183
Query: 182 QSGIKVGYGRGQGPS 196
Q ++V G+ P+
Sbjct: 184 QFSVEVAVGKTLNPT 198
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASLDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASDNVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A+N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRM--ASQPAMNNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+GGCCS
Sbjct: 183 KPSTVQL-RGQ--------PVEQKGGCCS 202
>gi|47225841|emb|CAF98321.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 89/186 (47%), Positives = 129/186 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ +KLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDSFNTTFISTIGIDFKIRTIELDGKRVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDI+ ++F ++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDISNEKSFENIKNWIRNIEEHASSDVEKMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ RR VSK+ GE+ A + G+ FLE SA+++ NVEEAF A IL N+ D
Sbjct: 124 DMTDRRQVSKDRGEKLAIDYGVKFLETSAKSSLNVEEAFYTMARDILHNLSSKTADPTAG 183
Query: 182 QSGIKV 187
SG V
Sbjct: 184 GSGKPV 189
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 139/207 (67%), Gaps = 10/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 121
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S
Sbjct: 122 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 181
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ Q + G GGCC
Sbjct: 182 NVKI-----QSTPVKQSG-----GGCC 198
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 139/207 (67%), Gaps = 10/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 128
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S
Sbjct: 129 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 188
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ Q + G GGCC
Sbjct: 189 NVKI-----QSTPVKQSG-----GGCC 205
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAV E + FA E G+ F+E SA+ + NVE+AF+ A+ I + + A N+
Sbjct: 125 LTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKERM---ASQPTNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVGQKSGCCS 201
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 140/209 (66%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 6 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 126 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
S +K+ + V Q GGCC
Sbjct: 186 SNVKI-----------QSTPVKQSSGGCC 203
>gi|321254029|ref|XP_003192938.1| rab/GTPase [Cryptococcus gattii WM276]
gi|317459407|gb|ADV21151.1| Rab/GTPase, putative [Cryptococcus gattii WM276]
Length = 211
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 136/208 (65%), Gaps = 5/208 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+L K ++IGD+GVGKSCLLL+F + + P TIG++F R + +DG+ IKLQIWDT
Sbjct: 9 YDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELDGKRIKLQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT +YYRGA G LLVYD+T ++FN++ +WL + QHA+P ++ +L+GNKCD
Sbjct: 69 AGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIRTWLSNIEQHASPGVNKILIGNKCD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+R+V+ E+G A E GL FLE SA+ + VEEAF A ++I+ +D+ Q
Sbjct: 129 WEEKRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLA----RDIKTRLIDS-QPQ 183
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
V G +G + S GGCC
Sbjct: 184 EAAPVQLGADRGGVNVNKQSDSSSGGCC 211
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKASFFR 203
>gi|74833808|emb|CAI39364.1| rab_A39 [Paramecium tetraurelia]
Length = 222
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 95/187 (50%), Positives = 129/187 (68%), Gaps = 1/187 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y +FKYIIIGDTGVGKS +LLQ + + HD TIGVEFGA+++ ++G IKLQIWD
Sbjct: 3 NYSLMFKYIIIGDTGVGKSSILLQLIENEIREQHDATIGVEFGAKIIKVNGMNIKLQIWD 62
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE+FRSI RSYYR A GALLVYDIT + +F++L W+E+ + + N NM I+L GNK
Sbjct: 63 TAGQENFRSIIRSYYRSAIGALLVYDITNKNSFHNLQRWMEEIKNNGNANMVIVLCGNKI 122
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL + +G Q+A+ L+FLE SA+ NV+ AF ++ +ILQ I + + +
Sbjct: 123 DLESEQLALILQGWQYAQSQSLIFLEISAKQGINVQSAFYQSTQRILQEIDDQKI-LLGQ 181
Query: 182 QSGIKVG 188
GIK+G
Sbjct: 182 DPGIKIG 188
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIMTKLNRKMNDSNSA 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITENRSKKTSFFR 203
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 139/207 (67%), Gaps = 10/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S
Sbjct: 121 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 180
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ Q + G GGCC
Sbjct: 181 NVKI-----QSTPVKQSG-----GGCC 197
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 132/184 (71%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 13 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 72
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 73 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 132
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 133 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 192
Query: 183 SGIK 186
S +K
Sbjct: 193 SNVK 196
>gi|406868470|gb|EKD21507.1| secretion related Rab/GTPase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 203
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/196 (47%), Positives = 131/196 (66%), Gaps = 1/196 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K ++IGD+GVGKSC LL+F++ F P TIG++F R + +DG+ +KLQIWD
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRVKLQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LLVYD+T +FN++ +W + QHA ++ +L+GNKC
Sbjct: 66 TAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIRTWFSNVEQHATEGVNKILIGNKC 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D RR VS E G+Q A E G+ FLE SA++ NVE+AF A+ I + I + A +
Sbjct: 126 DWEDRRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLASDIKKRIIDTAKTDASA 185
Query: 182 QSGIKVGYGRGQGPSG 197
G+ VG +G G G
Sbjct: 186 SQGVDVG-AQGSGSGG 200
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 138/209 (66%), Gaps = 11/209 (5%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYL K ++IGD+GVGKSCLLL+F++ F P TIG++F R + ++G+ IKLQIWD
Sbjct: 14 AYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWD 73
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LLVYD+T ++F ++ +W+ + QHA +++ ML+GNKC
Sbjct: 74 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKC 133
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+A ++ V G+ A E G+ FLE SA+ + NVEEAFI A ++I++ +D N+
Sbjct: 134 DMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLA----KDIKKRMIDTPNE 189
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ Q P+ +++ GCC
Sbjct: 190 PPQLHSKPDLTQNPN-------NKKRGCC 211
>gi|357132552|ref|XP_003567893.1| PREDICTED: ras-related protein RABA1f-like [Brachypodium
distachyon]
Length = 216
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLTRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ WL + + H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWLRELKDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV E+ + FA+ F+E SA A NVE+AF + ++I + + + ALD +D
Sbjct: 129 LRHLRAVQSEDAKAFAERENTFFMETSALEAMNVEDAFTEVLSQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G D + ++ CCS
Sbjct: 189 AAPPKGKTISVGSKD--DVSAVKKSACCS 215
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 133/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++ + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ W+ + R H + N+ +MLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVMMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV E+ + FA+ F+E SA A NVE+AF + A+I + + + ALD +D
Sbjct: 129 LRHLRAVPTEDAKAFAERQNAFFMETSALEAMNVEDAFTEVLAQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G+ G G D + ++ CCS
Sbjct: 189 AAPPRGHTINVG--GKDDVSAVKKSACCS 215
>gi|156050967|ref|XP_001591445.1| hypothetical protein SS1G_08072 [Sclerotinia sclerotiorum 1980]
gi|154692471|gb|EDN92209.1| hypothetical protein SS1G_08072 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 249
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 105/247 (42%), Positives = 151/247 (61%), Gaps = 38/247 (15%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP------ 54
+S+DY+ K + IGD+G GKS L ++ + RF P HD+TIGVEFG+R++ + G P
Sbjct: 4 LSWDYIAKLVCIGDSGTGKSSLTIRLCEGRFSPHHDVTIGVEFGSRIIPV-GPPNSEGFK 62
Query: 55 -------------------------IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDIT 89
+KL +WDTAGQE+++S+TRSY+RGA+GALLV+DI+
Sbjct: 63 AKSSILEEAPVAKASAAASDVPQKHMKLSLWDTAGQETYKSVTRSYFRGASGALLVFDIS 122
Query: 90 RRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA----HRRAVSKEEGEQFAKENGLL- 144
RR TF H++ WL D RQ A P++ ++LVGNK DLA ++R VS EE E +AK NG+L
Sbjct: 123 RRPTFEHVTDWLHDLRQIAEPDIVVVLVGNKSDLATNEENKREVSVEEAEAWAKRNGVLE 182
Query: 145 FLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQSGIK-VGYGRGQGPSGARDGTV 203
++E SA++ + VE AF + A +I NI+ G D + +SG+K GYG +
Sbjct: 183 YVETSAKSGEGVENAFSRVAERIYMNIEAGKYDLNDRRSGVKGPGYGGSRTNVKLAPQQA 242
Query: 204 SQRGGCC 210
+ GGCC
Sbjct: 243 TGGGGCC 249
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 138/208 (66%), Gaps = 11/208 (5%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCDL
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 129
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
+ VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + + A+N
Sbjct: 130 TANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM--ASQPAMNTAR 187
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 188 PPTVQI-RGQ--------PVNQKSGCCS 206
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/208 (49%), Positives = 138/208 (66%), Gaps = 11/208 (5%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCDL
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
+ VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + + A+N
Sbjct: 121 TANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM--ASQPAMNTAR 178
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 179 PPTVQI-RGQ--------PVNQKSGCCS 197
>gi|115465467|ref|NP_001056333.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|50511479|gb|AAT77401.1| putative GTP-binding protein [Oryza sativa Japonica Group]
gi|113579884|dbj|BAF18247.1| Os05g0564400 [Oryza sativa Japonica Group]
gi|215706418|dbj|BAG93274.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215766623|dbj|BAG98685.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632570|gb|EEE64702.1| hypothetical protein OsJ_19557 [Oryza sativa Japonica Group]
Length = 217
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ W+ + + H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA++ F+E SA + NVE AF + +I + + ALD +D
Sbjct: 129 LRHLRAVSTEDAKAFAEKENTFFMETSALESMNVENAFTEVLTQIYHVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ CCS
Sbjct: 189 AAPPKGQTINVG--GKDDVSAVKKSACCS 215
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYDIT +ETFN++ WL++ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +RAV + + +A + G+ FLE SA+++ NVE+AF+ A++I + G +
Sbjct: 128 LTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRM--GPVQGAGGA 185
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G+++ +G++ + GCC
Sbjct: 186 PGVRI--------TGSQPVQDKKSSGCC 205
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 138/208 (66%), Gaps = 11/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ +++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLSEIDRYASDSVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ VS E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A N+
Sbjct: 125 LTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRM--ASQPASNNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
V RGQ V+Q+ GCC
Sbjct: 183 RPPTVQI-RGQ--------PVNQKSGCC 201
>gi|325182525|emb|CCA16980.1| Rab2 family GTPase putative [Albugo laibachii Nc14]
Length = 232
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/210 (51%), Positives = 149/210 (70%), Gaps = 14/210 (6%)
Query: 7 FKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAGQE 66
K+IIIGD+ VGKS LLLQFT++ FQ +HDLTIGVEFGA+++ +DGR +KL+IWDTAGQE
Sbjct: 32 LKFIIIGDSEVGKSSLLLQFTEQHFQAIHDLTIGVEFGAKLLDVDGRKVKLEIWDTAGQE 91
Query: 67 SFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHA-NPNMSIMLVGNKCDLA- 124
+F SITRSYYRGA GALLV+D+ +RE+F HL+ WL++ Q+ N N++I +VG K DL
Sbjct: 92 TFLSITRSYYRGADGALLVFDVGKRESFQHLNRWLQECNQNCQNENIAITVVGMKSDLPE 151
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI---QEGALDAVND 181
R V++EEG ++A +GL F+EASA+TA NVE+ F +TA KIL N + A ++ D
Sbjct: 152 EERKVTEEEGREWAYSHGLHFVEASAKTATNVEQVFARTATKILGNFDISNQQARNSAQD 211
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ I+V + + S RD CC+
Sbjct: 212 KIKIEVEQ-QHRSESKPRD--------CCT 232
>gi|328859801|gb|EGG08909.1| hypothetical protein MELLADRAFT_84389 [Melampsora larici-populina
98AG31]
Length = 220
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/180 (52%), Positives = 129/180 (71%), Gaps = 12/180 (6%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTI-DGRPIKLQIW 60
++DY+ K++++GD+ GKS LL+Q TDKRF D TIGVEFGA ++++ +G+ IK+Q+W
Sbjct: 3 TWDYIMKFVVVGDSNTGKSSLLVQLTDKRFLTQSDPTIGVEFGASLISLPNGKTIKVQVW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGA+GALLV+D T R +F HL +WL+D + +PN+ I+LVGNK
Sbjct: 63 DTAGQESFRSITRSYYRGASGALLVFDTTYRPSFQHLENWLKDLKSFGDPNLVIVLVGNK 122
Query: 121 CDL-----------AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
DL R VS EE +Q+A ++ L ++E SA+T +NVEEAF A +I Q
Sbjct: 123 SDLITSNSQSDSSSTSTRQVSVEEAQQWAIDHDLQYIETSAKTGENVEEAFASVAKQIHQ 182
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T + +FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>gi|255558942|ref|XP_002520494.1| protein with unknown function [Ricinus communis]
gi|223540336|gb|EEF41907.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/209 (48%), Positives = 138/209 (66%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVDGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ I++ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVILMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV++E+G+ A+ L FLE SA A NVE+AF +I I + AL A +
Sbjct: 129 LNHLRAVAEEDGQALAERESLSFLETSALEATNVEKAFQTILTEIYHIISKKAL-AAQEA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G G+G + A D + + + CCS
Sbjct: 188 AGNSTLPGQGTTINVA-DTSGNTKRSCCS 215
>gi|15234020|ref|NP_193615.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
gi|75206859|sp|Q9SN35.1|RAA1D_ARATH RecName: Full=Ras-related protein RABA1d; Short=AtRABA1d; AltName:
Full=Ras-related protein Rab11B; Short=AtRab11B;
AltName: Full=Ras-related protein SGBP; Short=AthSGBP
gi|4539399|emb|CAB37465.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|7268674|emb|CAB78882.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|28393029|gb|AAO41949.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|28827250|gb|AAO50469.1| putative ras-related GTP binding protein [Arabidopsis thaliana]
gi|110736954|dbj|BAF00433.1| ras-like GTP-binding protein [Arabidopsis thaliana]
gi|332658691|gb|AEE84091.1| RAB GTPase homolog A1D [Arabidopsis thaliana]
Length = 214
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++ + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+ + FA+ L F+E SA + NVE AF + +I + + A++A D
Sbjct: 130 LRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGEDS 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G D + ++ GCCS
Sbjct: 190 GNVP-----SKGEKIDVDVSAVKKTGCCS 213
>gi|9368944|emb|CAB99174.1| related to GTP-binding protein rab2 [Neurospora crassa]
Length = 239
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 144/203 (70%), Gaps = 17/203 (8%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRP------ 54
+ +DY+ K + IGD+G GKS L ++ + RF HD+TIGVEFG+R+V + P
Sbjct: 5 LPWDYIAKLVCIGDSGCGKSSLTIRLCEGRFVTHHDVTIGVEFGSRIVPVASDPPVPQKH 64
Query: 55 IKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSI 114
+KL +WDTAGQE+++S+TRSY+RGA+GALLV+D++R++TF H++ WL D R A P++ +
Sbjct: 65 MKLSLWDTAGQETYKSVTRSYFRGASGALLVFDLSRKQTFEHVTDWLNDLRAIAEPDIVV 124
Query: 115 MLVGNKCDLA----------HRRAVSKEEGEQFAKENGLL-FLEASARTAQNVEEAFIKT 163
+LVGNK DL ++R V+++E E++A+ NG+L ++E SA++ +NVE+AF++
Sbjct: 125 ILVGNKADLTEANDENEGENNKREVTRKEAEEWARRNGVLEYVETSAKSGENVEKAFMRV 184
Query: 164 AAKILQNIQEGALDAVNDQSGIK 186
A +I QNIQ G D + +SG+K
Sbjct: 185 AERIYQNIQAGKYDLNDRRSGVK 207
>gi|66827165|ref|XP_646937.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897455|sp|Q55ET3.1|RABQ_DICDI RecName: Full=Ras-related protein RabQ
gi|60475033|gb|EAL72969.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/197 (48%), Positives = 130/197 (65%), Gaps = 1/197 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
+Y K I+ G VGKS LLLQF +K F D TIGVEF R + ID IKL+IWDTA
Sbjct: 3 EYHLKCIVTGPPFVGKSSLLLQFCEKEFSFEMDTTIGVEFQTRSILIDSSKIKLEIWDTA 62
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQESFRSIT +YYRGA ALL YDIT+R++F +LS W+++ RQ ++PN+ I L+GNKCD
Sbjct: 63 GQESFRSITTNYYRGAHIALLCYDITKRQSFQYLSGWMDEVRQMSSPNIVIALIGNKCDC 122
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
+R ++ EEG + AKEN +LF E SA+ ++VE F + K+L I++G L VN +
Sbjct: 123 KDKRVITTEEGAKNAKENDILFFETSAKDYESVESVFDGVSKKVLSLIKQGTLTVVNKKP 182
Query: 184 -GIKVGYGRGQGPSGAR 199
I++G + P +
Sbjct: 183 QSIQLGAPTQETPKKPK 199
>gi|340713998|ref|XP_003395520.1| PREDICTED: ras-related protein Rab-1A-like [Bombus terrestris]
gi|350418865|ref|XP_003491994.1| PREDICTED: ras-related protein Rab-1A-like [Bombus impatiens]
gi|380024902|ref|XP_003696227.1| PREDICTED: ras-related protein Rab-1A-like [Apis florea]
Length = 206
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 137/208 (65%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T +ETFN++ WLE+ ++A N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + G+ FLE SA+ A NVE+AF+ AA+I + + +
Sbjct: 128 LHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGNSDPA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +K+ +GR S + GCC
Sbjct: 188 NKVKIEHGR---------PIESSKSGCC 206
>gi|453087907|gb|EMF15948.1| ras GTPase Rab11 [Mycosphaerella populorum SO2202]
Length = 213
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 137/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDNKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALL YD+T+ +TF++++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLCYDLTKSQTFDNVTRWLKELRDHADTNIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV ++ + FA ENGL F+E SA A NVE AF + +I + + ALD +
Sbjct: 126 LRHLRAVPTDDAKAFAAENGLSFIETSALDASNVELAFQQELTEIYRIVSSKALD---ND 182
Query: 183 SGIKVGYGRGQG---PSGARDGTVSQRGGCC 210
+G G+G S G +++G CC
Sbjct: 183 AGSAGAPGQGTSIPLSSSNPPGGDAKKGQCC 213
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 133/209 (63%), Gaps = 8/209 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYL K ++IGD+GVGKSCLLL+F+D F TIG++F R + +DG+ IKLQIWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT +YYRGA G LLVYD+T +FN++ +W+ + QHA+ N++ +LVGNK D
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNKILVGNKAD 131
Query: 123 LAH-RRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
+ +RAV +G+ A E G+ F E SA+T QNVE+ F A I Q + + A
Sbjct: 132 MDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKAEPA 191
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S I + G GP+ +Q+ CC
Sbjct: 192 TSKIHLDQASGAGPA-------AQKSACC 213
>gi|260808582|ref|XP_002599086.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
gi|229284362|gb|EEN55098.1| hypothetical protein BRAFLDRAFT_281466 [Branchiostoma floridae]
Length = 219
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID-GRPIKLQIWDTA 63
Y F+ I+IGD+ VGKS LL +FTD +F D T+GV+F AR++ ++ G+ +KLQ+WDTA
Sbjct: 8 YQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVGVDFFARLMEVEPGKRVKLQLWDTA 67
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP-NMSIMLVGNKCD 122
GQE FRSITRSYYR + GA+LVYD+T R++F HL SW +A+QH P NM +LVG+K D
Sbjct: 68 GQERFRSITRSYYRNSVGAVLVYDVTNRKSFEHLESWWHEAKQHTMPHNMVFILVGHKID 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS+EEG+QFA+ + + +LE SA+ A+NVE+AF + +I + ++ G ++
Sbjct: 128 LASEREVSQEEGQQFARTHDMSYLETSAKNAENVEKAFWQVTREIYELVEMGVINTEEGW 187
Query: 183 SGIKVG 188
G+K G
Sbjct: 188 EGVKSG 193
>gi|297800182|ref|XP_002867975.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
gi|297313811|gb|EFH44234.1| hypothetical protein ARALYDRAFT_492979 [Arabidopsis lyrata subsp.
lyrata]
Length = 214
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 130/209 (62%), Gaps = 5/209 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++ + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL + R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+ + FA+ L F+E SA + NVE AF + +I + + A++A D
Sbjct: 130 LRHLVAVQTEDAKSFAENESLYFMETSALESTNVENAFSEVLTQIYHVVSKKAMEAGQDS 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G D + ++ GCCS
Sbjct: 190 GNVP-----SKGEKIDVDVSAVKKTGCCS 213
>gi|449431866|ref|XP_004133721.1| PREDICTED: ras-related protein RABA2a-like [Cucumis sativus]
Length = 216
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 140/211 (66%), Gaps = 7/211 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF+++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPMTFDNVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NVE+AF ++I + I + +L++
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLSFIETSALEATNVEKAFQTILSEIYRIISKKSLNSEEPA 188
Query: 183 SG--IKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ IK G G S A + + CCS
Sbjct: 189 AANNIKEGKTIVVGESEA-----NTKKACCS 214
>gi|260808596|ref|XP_002599093.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
gi|229284369|gb|EEN55105.1| hypothetical protein BRAFLDRAFT_114662 [Branchiostoma floridae]
Length = 219
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/186 (50%), Positives = 134/186 (72%), Gaps = 2/186 (1%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTID-GRPIKLQIWDTA 63
Y F+ I+IGD+ VGKS LL +FTD +F D T+GV+F AR++ ++ G+ +KLQ+WDTA
Sbjct: 8 YQFRLILIGDSTVGKSSLLRRFTDGKFIEYSDPTVGVDFFARLMEVEPGKRVKLQLWDTA 67
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANP-NMSIMLVGNKCD 122
GQE FRSITRSYYR + GA+LVYD+T R++F HL SW +A+QH P NM +LVG+K D
Sbjct: 68 GQERFRSITRSYYRNSVGAVLVYDVTNRKSFEHLESWWHEAKQHTMPHNMVFILVGHKID 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
LA R VS+EEG+QFA+ + + +LE SA+ A+NVE+AF + +I + ++ G ++
Sbjct: 128 LASEREVSQEEGQQFARTHDMSYLETSAKNAENVEKAFWQVTREIYELVEMGVINTEEGW 187
Query: 183 SGIKVG 188
G+K G
Sbjct: 188 EGVKSG 193
>gi|291231114|ref|XP_002735510.1| PREDICTED: mel transforming oncogene-like [Saccoglossus
kowalevskii]
Length = 208
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 136/197 (69%), Gaps = 1/197 (0%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK ++IGD+GVGK+C+L +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKKWIRNIEEHASADVEKMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ RR V+KE GEQ A E G+ F+E SA+ + NVEEAFI A I + + + N
Sbjct: 124 DMEDRRTVTKERGEQLAIEYGIKFMETSAKASVNVEEAFITLARDIKGKMDKKMESSPNP 183
Query: 182 QS-GIKVGYGRGQGPSG 197
++ G+KV + + SG
Sbjct: 184 RNQGVKVVDTQSKKSSG 200
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 91/184 (49%), Positives = 132/184 (71%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIK 186
S +K
Sbjct: 188 SNVK 191
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 94/209 (44%), Positives = 139/209 (66%), Gaps = 11/209 (5%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYL K ++IGD+GVGKSCLLL+F++ F P TIG++F R + ++G+ IKLQIWD
Sbjct: 11 AYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELEGKRIKLQIWD 70
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LLVYD+T ++F ++ +W+ + QHA +++ ML+GNKC
Sbjct: 71 TAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRNWIRNIEQHATDSVNKMLIGNKC 130
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+A ++ V G+ A E G+ FLE SA+ + NVEEAFI A ++I++ +D N+
Sbjct: 131 DMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLA----KDIKKRMIDTPNE 186
Query: 182 QSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
Q + V G G + +++ CC
Sbjct: 187 QPQV-VQPGTNLGANN------NKKKACC 208
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 139/208 (66%), Gaps = 12/208 (5%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCDL
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCDL 120
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++S
Sbjct: 121 TTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEKS 180
Query: 184 GIKVGYGRGQGPSGARDGTVSQ-RGGCC 210
+K+ + V Q GGCC
Sbjct: 181 NVKI-----------QSTPVKQSSGGCC 197
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 127/173 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGA 175
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA 180
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS + + FA E G+ F+E SA+ + NVE+AF+ A+ I + A N+
Sbjct: 125 LTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRM---ASQPTNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVGQKSGCCS 201
>gi|224120066|ref|XP_002331128.1| predicted protein [Populus trichocarpa]
gi|222872856|gb|EEF09987.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 197 bits (501), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 139/214 (64%), Gaps = 12/214 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV+ E+ + +A++ GL F+E SA A NV++AF ++I + I + L +
Sbjct: 129 LKHLRAVATEDAQSYAEKEGLAFVETSALEATNVDKAFQTILSEIYRIISKKTLSSEESA 188
Query: 183 SGIKVGYGR-----GQGPSGARDGTVSQRGGCCS 211
+ + V G+ G PS +++ CCS
Sbjct: 189 APVSVKDGKTIVVGGPDPS-------TKKTTCCS 215
>gi|123388666|ref|XP_001299604.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121880489|gb|EAX86674.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 199
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 85/156 (54%), Positives = 120/156 (76%)
Query: 5 YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTAG 64
Y+FK+II+G++ VGKSC+LL+F + RFQP+HD+T+GV F +MV+I+G+ +K+Q+WDTAG
Sbjct: 6 YIFKFIIVGNSAVGKSCMLLRFDEDRFQPIHDVTVGVTFSIKMVSIEGQDVKVQVWDTAG 65
Query: 65 QESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDLA 124
QE FRSITRSYYR +A A++VYDIT + +F + W+ D R A P+ + LVGNK DLA
Sbjct: 66 QEIFRSITRSYYRDSACAIIVYDITDQSSFAKVEDWIRDVRNLAPPDCLLALVGNKLDLA 125
Query: 125 HRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAF 160
+RAV EG++ A+++ LLF E SA T +NV+E F
Sbjct: 126 AQRAVQTSEGQELAEKHNLLFFETSAATGENVQELF 161
>gi|449456603|ref|XP_004146038.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|449510339|ref|XP_004163637.1| PREDICTED: ras-related protein RABA1f-like [Cucumis sativus]
gi|307135941|gb|ADN33802.1| GTP-binding protein [Cucumis melo subsp. melo]
Length = 217
Score = 197 bits (501), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSNIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA++ F+E SA + NVE AF + +I + + AL+ D
Sbjct: 130 LRHLRAVSTEDAQAFAEKENTFFMETSALESLNVENAFTEVLTQIYRVVCRKALEIGEDP 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G G D + ++ GCCS
Sbjct: 190 AALPKGQTINVGNKD--DVSAMKKVGCCS 216
>gi|413951936|gb|AFW84585.1| ras protein Rab11C [Zea mays]
Length = 345
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 140/211 (66%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + IDG+ +K QIWDT
Sbjct: 138 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDT 197
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT++++F+ + WL + R HA+ N+ +M+VGNK D
Sbjct: 198 AGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSD 257
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G F+++ GL FLE SA A NVE+AF ++I Q + + AL A Q
Sbjct: 258 LNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAA---Q 314
Query: 183 SGIKVGYGRGQGPS--GARDGTVSQRGGCCS 211
+ QG + A TV+ +G CCS
Sbjct: 315 ASASTNGRSMQGTTINVAESSTVT-KGSCCS 344
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 139/209 (66%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKND 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA+I + + A+N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRM--ASQPAMNNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 183 RPPTVQI-RGQ--------PVNQKSGCCS 202
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 127/173 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGA 175
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA 177
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 121/165 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 167
L RAVS E + FA E G+ F+E SA+ A NVE+AF+ AA I
Sbjct: 125 LEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI 169
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 11/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +++FN+L WL++ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKVWLQEIDRYACENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A ++ + FLEASA+ A NVE+AF+ AA+I + A + Q
Sbjct: 125 LTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNTVGPPAPSGASGQ 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ Q SG+ GCC
Sbjct: 185 --VKIDSTPVQSKSGS---------GCC 201
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/198 (48%), Positives = 137/198 (69%), Gaps = 1/198 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V ++G+ +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++AN N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQWLNEIDRYANENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNI-QEGALDAVND 181
L +RAV E + FA E G+ FLE SA+ A NVE+AF+ AA+I + + AL+
Sbjct: 125 LTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKTRMASQPALNQGPK 184
Query: 182 QSGIKVGYGRGQGPSGAR 199
+ ++ G GR G + ++
Sbjct: 185 GATVRPGEGRPVGKANSQ 202
>gi|402084201|gb|EJT79219.1| Ras-like protein Rab-11A [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 104/208 (50%), Positives = 131/208 (62%), Gaps = 2/208 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+LFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 6 YDFLFKVVLIGDSGVGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDT 65
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI++ +T+ ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 66 AGQERYRAITSAYYRGAVGALLVYDISKHQTYENVIRWLKELRDHADANIVIMLVGNKSD 125
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV EE + FA EN L F+E SA A NVE AF +I + + ALD+ D
Sbjct: 126 LRHLRAVPTEEAKAFASENHLSFIETSAFDASNVELAFQNILTEIYRIVSSKALDS-GDA 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
I G G S D Q G CC
Sbjct: 185 QAIPQG-GTTIPLSKTADDGAGQGGKCC 211
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 135/208 (64%), Gaps = 12/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D ++ + TIGV+F R V +DG+ +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T ++FN++ +WL + ++AN N+ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKTWLHEIDRYANENVVKLLVGNKAD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ VS E ++FA G+ F+E SA+ + NVE AF+ A +I+Q + Q
Sbjct: 125 LTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQK-------NASVQ 177
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
SG K G P+ + GCC
Sbjct: 178 SGPK-----GAKPTVVPSAAKKESKGCC 200
>gi|197127904|gb|ACH44402.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
Length = 217
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/185 (48%), Positives = 132/185 (71%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE R+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERLRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKV 187
S +K+
Sbjct: 188 SNVKI 192
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQ WDT
Sbjct: 56 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQRWDT 115
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 116 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 175
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 176 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 235
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 236 SNVKI-----QSTPVKQSG-----GGCC 253
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 137/200 (68%), Gaps = 2/200 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F+++ F IG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISPIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D+ +R VSKE GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+ +
Sbjct: 124 DMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIMTKLNRKMNDSNSS 183
Query: 182 QSG--IKVGYGRGQGPSGAR 199
+G +K+ R + S R
Sbjct: 184 GAGGPVKITESRSKKTSFFR 203
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 136/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L RAVS + + FA E G+ F+E SA+ + NVE+AF+ A+ I + A N+
Sbjct: 125 LTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKDRM---ASQPTNNA 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V Q+ GCCS
Sbjct: 182 RPPTVQI-RGQ--------PVGQKSGCCS 201
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 131/209 (62%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ W+ + + H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV E+ + FA+ F+E SA A NVE+AF + +I + + + ALD +D
Sbjct: 129 LRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEDAFTEVLTQIYRVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ G G G D + ++ CCS
Sbjct: 189 AAPPKGQTINVG--GKDDVSAVKKSACCS 215
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 137/209 (65%), Gaps = 12/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +ETFN++ WL++ ++A +++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQWLQEIDRYACESVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + G D+
Sbjct: 125 LTTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRM--GPPQTTADR 182
Query: 183 S-GIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + G PSG GGCC
Sbjct: 183 SEKVPLKSGSPVKPSG---------GGCC 202
>gi|156545982|ref|XP_001607208.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Nasonia
vitripennis]
Length = 211
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 137/208 (65%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T +E+FN++ WLE+ ++A N++ +LVGNK D
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIDRYACDNVNKLLVGNKSD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + G+ FLE SA+ A NVE+AF+ AA+I + + A +
Sbjct: 128 LHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKSRVGPPSSGASDQT 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ G SG + + GCC
Sbjct: 188 SKLKIDQGHNIDTSGIQ----GSKSGCC 211
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 93/165 (56%), Positives = 122/165 (73%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKI 167
LA R VS E G+ A E G+ FLE SA+ A NVE+AF+ A +I
Sbjct: 125 LAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 136/208 (65%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ +KLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T RE+FN++ +W+ + ++A +S +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKNWMMEIDKYAMEGVSKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L +R V+ EEG++FA + F+E SA+ A NVE+AF A++I +Q VN Q
Sbjct: 125 LTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEIKARVQ------VNQQ 178
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
R GPS S GCC
Sbjct: 179 QSRPNANVR-LGPSQP---VRSVSSGCC 202
>gi|225446511|ref|XP_002278749.1| PREDICTED: ras-related protein Rab11B [Vitis vinifera]
gi|147844837|emb|CAN83336.1| hypothetical protein VITISV_029113 [Vitis vinifera]
Length = 216
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 135/210 (64%), Gaps = 5/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDEKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + ++ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVDRWLKELRDHTDSSIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + +A++ F+E SA + NVE AF + +I + AL+ ++
Sbjct: 130 LGHLRAVSTEDAKAYAEKESTFFIETSALESTNVENAFTEVLTQIYHVVSRKALETGDEA 189
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ + +GQ + G D + + GGCCS
Sbjct: 190 ATVP----KGQTINVGKDDVSAIKIGGCCS 215
>gi|15232477|ref|NP_188124.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
gi|75273740|sp|Q9LK99.1|RAA1G_ARATH RecName: Full=Ras-related protein RABA1g; Short=AtRABA1g
gi|8777489|dbj|BAA97069.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|26452472|dbj|BAC43321.1| putative ras-related GTP-binding protein [Arabidopsis thaliana]
gi|28973321|gb|AAO63985.1| putative Ras family GTP-binding protein [Arabidopsis thaliana]
gi|332642090|gb|AEE75611.1| RAB GTPase-like protein A1G [Arabidopsis thaliana]
Length = 217
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 132/209 (63%), Gaps = 2/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YD+L+K ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDFLYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H N+ IMLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEANIVIMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ + FA+ F+E SA A NVE AF + ++I + + ALD +D
Sbjct: 130 LRHLRAVSTEDAKAFAERENTFFMETSALEALNVENAFTEVLSQIYRVASKKALDIGDDH 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G G D + ++ GCCS
Sbjct: 190 TTLPKGQSINVGSKD--DVSEVKKVGCCS 216
>gi|440302421|gb|ELP94734.1| GTP-binding protein YPTC4, putative [Entamoeba invadens IP1]
Length = 217
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 125/173 (72%), Gaps = 1/173 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D++FKYIIIG+ VGKSCLLLQ+ D RFQP++DLTIGVEFG + V I +KLQ+WDTA
Sbjct: 38 DHIFKYIIIGEVSVGKSCLLLQYEDHRFQPIYDLTIGVEFGTKNVRIQDTTVKLQLWDTA 97
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
G E FRSITRSYYRGA G ++VYD++R ++F+ + W E+ +++ N N +MLVGNKCD+
Sbjct: 98 GSERFRSITRSYYRGAVGVIMVYDVSRSDSFSKIDEWAEEVKKYNNGNYIMMLVGNKCDI 157
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGAL 176
+ +S E G++ A + F E SA+T +NV++ F K +L++++ G +
Sbjct: 158 VE-KVISTEMGKKKAAQLNASFYETSAKTGENVDKVFDKLTEDVLRDVRSGKI 209
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 139/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
+DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 60 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 179
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 180 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 239
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ + S GGCC
Sbjct: 240 SNVKIQSTPVKQSS----------GGCC 257
>gi|121543895|gb|ABM55612.1| putative RAB1 [Maconellicoccus hirsutus]
Length = 203
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 135/208 (64%), Gaps = 9/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVDLDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD T E+FN+L WLE+ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDCTDLESFNNLKQWLEEVDRYACENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
++ V +++A + + FLE SA+ A NVE+AF+ A++I + + AV +
Sbjct: 125 EVTKKVVDYTTAKEYADQLNIPFLETSAKNATNVEQAFMTMASEIKNRVGPPSSAAVTES 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ +K+ GR + + GCC
Sbjct: 185 AKVKIDQGR---------TIETNKSGCC 203
>gi|47216652|emb|CAG04850.1| unnamed protein product [Tetraodon nigroviridis]
Length = 217
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 103/211 (48%), Positives = 134/211 (63%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 8 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDI + T+ ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 68 AGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNNIVIMLVGNKSD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV +E FA++N L F+E SA + NVEEAF +I + + + ++D+
Sbjct: 128 LRHLRAVPTDEARAFAEKNTLSFIETSALDSTNVEEAFKNILTEIYRIVSQK---QISDR 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGG---CC 210
SG + G T SQRGG CC
Sbjct: 185 SGHEESPGNNVVDISLPPTTDSQRGGKLPCC 215
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 140/207 (67%), Gaps = 10/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYDIT +ETFN++ WL++ ++A N++ +LVGNKCDL
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNKLLVGNKCDL 124
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
+RAV + + +A + G+ FLE SA+++ NVE+AF+ A++I + G +
Sbjct: 125 TAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRM--GPVQGAGGAP 182
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
G+++ +G++ + GGCC
Sbjct: 183 GVRI--------TGSQPVQDKKSGGCC 201
>gi|225712954|gb|ACO12323.1| Ras-related protein ORAB-1 [Lepeophtheirus salmonis]
Length = 201
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 136/208 (65%), Gaps = 11/208 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGDTGVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDTGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +++FN+L WL++ ++A N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLKQWLQEIDRYACENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + + FLEASA+ A NVE+AF+ AA+I + A + Q
Sbjct: 125 LTTKKVVDYTTAKEYADQLNMPFLEASAKNATNVEQAFMTMAAEIKNRVGPPAPSGPSGQ 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
I P ++ GT GCC
Sbjct: 185 VKID------STPVSSKSGT-----GCC 201
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 131/211 (62%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYD+TR TF ++ W+ + R H + N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDANIVIMLVGNKAD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAV E+ + FA+ F+E SA A NVE AF + +I + + ALD +D
Sbjct: 129 LRHLRAVPTEDAKAFAERENAFFMETSALEAMNVEGAFTEVLTQIYHVVSKKALDIGDDP 188
Query: 183 SGIKVGYGRGQGPS--GARDGTVSQRGGCCS 211
+ RGQ S G D + ++ CCS
Sbjct: 189 AAPP----RGQTISVGGKDDVSAVKKSACCS 215
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 86/177 (48%), Positives = 128/177 (72%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGK+CLL +F++ F TIG++F R + +DG+ IKLQIWD
Sbjct: 4 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G +LVYDIT ++F+++ +W+ + +HA+ ++ M++GNKC
Sbjct: 64 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVERMILGNKC 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
D+ +R VSKE+GE+ A + G+ FLE SA+++ NVEEAF A I+ + D+
Sbjct: 124 DMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRKMNDS 180
>gi|332027975|gb|EGI68026.1| Ras-related protein Rab-1A [Acromyrmex echinatior]
Length = 208
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 137/207 (66%), Gaps = 9/207 (4%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
DYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDTA
Sbjct: 11 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDTA 70
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE FR+IT SYYRGA G ++VYD T +ETFN++ WLE+ ++A N++ +LVGNKCDL
Sbjct: 71 GQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQWLEEIDRYACDNVNKLLVGNKCDL 130
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
++ V +++A + G+ FLE SA+ A NVE+AF+ AA+I + + A + +
Sbjct: 131 HTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEIKLRVGPPSSGASDPAN 190
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
+K+ +GR S + GCC
Sbjct: 191 KVKIEHGR---------PIESSKSGCC 208
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 4/208 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IG++ VGKS LLL+F+D F TIGV+F R I G+ +KLQIWDT
Sbjct: 7 YDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE F++IT SYY+GA G +LVYDIT R+TF + +WL +A ++AN N+ +LVGNK D
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDRQTFKDIDNWLAEADKNANENVIKLLVGNKID 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++R VS +EG++ A G+ F+E SA TA NVE AF+ A +I+ +Q+ + ++
Sbjct: 127 LENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQKSS----DNN 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G G+ + +G + ++GGCC
Sbjct: 183 KGGNQASGKTRIRAGEDINNIKKQGGCC 210
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 196 bits (499), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 95/208 (45%), Positives = 138/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V +++A + FLE SA+TA NVE+AF+ AA+I + G +
Sbjct: 127 LTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEIKNRMGPGTAASPGQS 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ + + S DG ++GGCC
Sbjct: 187 NKVDIS-------SKPVDG---KQGGCC 204
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 11/209 (5%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R V DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL + ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQWLNEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L + VS E + FA E G+ F+E SA+ A NVE+AF+ AA I + + A N+
Sbjct: 125 LTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRM--ASQPAANNA 182
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V RGQ V+Q+ GCCS
Sbjct: 183 RPPTVQI-RGQ--------PVNQKSGCCS 202
>gi|402589742|gb|EJW83673.1| rab-protein 14 [Wuchereria bancrofti]
Length = 176
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/149 (61%), Positives = 116/149 (77%)
Query: 38 TIGVEFGARMVTIDGRPIKLQIWDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL 97
TIGVEFG R++ + G+ IKLQIWDTAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHL
Sbjct: 7 TIGVEFGTRIIEVSGQKIKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHL 66
Query: 98 SSWLEDARQHANPNMSIMLVGNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVE 157
SSWL DAR +PN I ++GNK DL +R V+ EE + FA E+GL FLE SA+T NVE
Sbjct: 67 SSWLADARNLTHPNTVIFMIGNKSDLDGQRDVTFEEAKAFADEHGLTFLECSAKTGDNVE 126
Query: 158 EAFIKTAAKILQNIQEGALDAVNDQSGIK 186
+AF+ TA KI QNI++G+LD +G++
Sbjct: 127 DAFLDTARKIYQNIKDGSLDLNQADTGVQ 155
>gi|226502406|ref|NP_001146923.1| LOC100280532 [Zea mays]
gi|195605270|gb|ACG24465.1| ras-related protein Rab11C [Zea mays]
Length = 216
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 137/210 (65%), Gaps = 4/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS + +FT F TIGVEF R + IDG+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNIPSRFTRNEFCLESKSTIGVEFATRNLQIDGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT++++F+ + WL + R HA+ N+ +M+VGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADANIVVMMVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V +E+G F+++ GL FLE SA A NVE+AF ++I Q + + AL A Q
Sbjct: 129 LNHLRSVPEEDGRAFSEKEGLSFLETSALEAINVEKAFHTILSEIHQTVSKKALAA---Q 185
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
+ QG + + + +G CCS
Sbjct: 186 ASASTNGRSMQGTTINVAESSTVTKGSCCS 215
>gi|225465200|ref|XP_002264444.1| PREDICTED: ras-related protein RABA2a [Vitis vinifera]
gi|297739506|emb|CBI29688.3| unnamed protein product [Vitis vinifera]
Length = 215
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 140/211 (66%), Gaps = 8/211 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + ++GR +K QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+T+ TF ++S WL++ R HA+ N+ IML+GNK D
Sbjct: 69 AGQERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSNIVIMLIGNKTD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND- 181
L H RAV+ E+ + FA++ GL F+E SA A NVE+AF +I + I + L + +
Sbjct: 129 LKHLRAVATEDAQGFAEKEGLSFIETSALEATNVEKAFQTILGEIYRIISKKTLSSDDPA 188
Query: 182 QSGIKVGYGRGQGPSGARDGT-VSQRGGCCS 211
+GIK +G + DG+ + + CCS
Sbjct: 189 PAGIK------EGKTLVVDGSDTNTKKTCCS 213
>gi|145512377|ref|XP_001442105.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834529|emb|CAI44574.1| rab_A18 [Paramecium tetraurelia]
gi|124409377|emb|CAK74708.1| unnamed protein product [Paramecium tetraurelia]
Length = 217
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 90/186 (48%), Positives = 131/186 (70%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYII+GDT VGKSC+LL +T+K+F H+ TIGVEFG++++ ++ R IK+QIWDT
Sbjct: 4 YHFLFKYIIVGDTSVGKSCILLNYTEKKFNEDHETTIGVEFGSQLLKMNDRTIKIQIWDT 63
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYY+G+ G +LV+D+T+++T+ ++ W + + + I LVGNK D
Sbjct: 64 AGQESFRSITRSYYKGSIGVVLVFDLTKKDTYYNVMKWHNEILDCTHEFVEISLVGNKLD 123
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L R VS +E ++A+ N + +LE SA+T QNV++ F A +IL I +D +
Sbjct: 124 LESERQVSSKEALEYAQSNKMNYLETSAKTGQNVDKVFEDIAQRILVKIDNKTIDYTQEV 183
Query: 183 SGIKVG 188
GIK+G
Sbjct: 184 YGIKLG 189
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 92/190 (48%), Positives = 132/190 (69%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SYDYL K ++IGD+GVGKSCLLL+F++ F P TIG++F R + +DG+ IKLQIWD
Sbjct: 5 SYDYLIKLLLIGDSGVGKSCLLLRFSEDSFTPSFITTIGIDFKIRTIELDGKRIKLQIWD 64
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR+IT +YYRGA G LL+YD+T +++F+++ +W + QHA+ N+ +L+GNKC
Sbjct: 65 TAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVRTWFSNVEQHASENVYKILIGNKC 124
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D +R VS E+G+ A E G+ FLEASA+T NV+EAF A +I + + + N
Sbjct: 125 DCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREIKKQKIDAENEFSNQ 184
Query: 182 QSGIKVGYGR 191
+ + +G R
Sbjct: 185 ANNVDLGNDR 194
>gi|389742344|gb|EIM83531.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 246
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 101/189 (53%), Positives = 127/189 (67%), Gaps = 2/189 (1%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+L K+IIIG+ G GKSCLL FT F+ TIGVEF +R V + + IKLQ+WD
Sbjct: 16 TYDFLMKFIIIGEAGTGKSCLLHHFTHNTFKDHSQHTIGVEFSSRTVKLGEKRIKLQLWD 75
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGA+LVYDIT R++ +LS WL DAR A+P++ +LVGNK
Sbjct: 76 TAGQERFRSVTRSYYRGAAGAILVYDITNRDSLLNLSRWLADARALASPHLVAVLVGNKS 135
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
D R V E ++A EN + FLE S+ T NVE F+ A IL +I+ GALD D
Sbjct: 136 DREDEREVEWAEASRWAAENDVHFLETSSLTGDNVEAPFLLAARSILLSIESGALDP--D 193
Query: 182 QSGIKVGYG 190
+ G V YG
Sbjct: 194 KVGSGVSYG 202
>gi|388512933|gb|AFK44528.1| unknown [Lotus japonicus]
Length = 217
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 136/211 (64%), Gaps = 6/211 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDY FK ++IGD+GVGKS LL +FT F TIGVEF R + +D + +K QIWDT
Sbjct: 10 YDYPFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H + N+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDTNIVVMLVGNKAD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS E+ FA+ F+E SA + NVE AF + +I + + + AL+ +D
Sbjct: 130 LRHLRAVSTEDSTAFAERENTFFMETSALESLNVENAFTEVLTQIYRVVSKKALEIGDDP 189
Query: 183 SGIKVGYGRGQGPS-GARDG-TVSQRGGCCS 211
+ + +GQ + G+RD + ++ GCCS
Sbjct: 190 AALP----KGQTINVGSRDDVSAVKKSGCCS 216
>gi|123392476|ref|XP_001300248.1| Ras-related protein Rab11C [Trichomonas vaginalis G3]
gi|62736254|gb|AAX97456.1| small Rab GTPase Rab11a [Trichomonas vaginalis]
gi|121881256|gb|EAX87318.1| Ras-related protein Rab11C, putative [Trichomonas vaginalis G3]
Length = 211
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 135/207 (65%), Gaps = 2/207 (0%)
Query: 4 DYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDTA 63
D+L K ++IGD+GVGK+ LL +F +F P TIGVEF + + I+G+ +K QIWDTA
Sbjct: 7 DFLLKIVLIGDSGVGKTNLLSRFARDQFNPDSKSTIGVEFATKTLEIEGKTVKAQIWDTA 66
Query: 64 GQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCDL 123
GQE +R+IT +YYRGA GALL+YDIT TFN LS WL++ R++A+ N+ +MLVGNK DL
Sbjct: 67 GQERYRAITSAYYRGAIGALLLYDITASLTFNSLSRWLQELRENADSNIVVMLVGNKSDL 126
Query: 124 AHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQS 183
RAVS E+G F+++ LLF+E SAR A NV+EAF +I+ + + + V+ S
Sbjct: 127 QELRAVSTEDGTGFSQQENLLFIETSARNATNVQEAFTTLITEIVHRLSKQNI--VSPDS 184
Query: 184 GIKVGYGRGQGPSGARDGTVSQRGGCC 210
KVG +G + ++ CC
Sbjct: 185 PAKVGPNKGVTITSTTADDKKKKNTCC 211
>gi|409082788|gb|EKM83146.1| hypothetical protein AGABI1DRAFT_82815 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200656|gb|EKV50580.1| hypothetical protein AGABI2DRAFT_134329 [Agaricus bisporus var.
bisporus H97]
Length = 211
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 122/177 (68%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWD
Sbjct: 6 NYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWD 65
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE +R+IT +YYRGA GALLVYDI + T+ +++ WL++ R HA+ N+ IMLVGNK
Sbjct: 66 TAGQERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADTNIVIMLVGNKS 125
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDA 178
DL H RAV +E + FA ENGL F+E SA A NVE AF I + + +L++
Sbjct: 126 DLKHLRAVPTDEAKTFASENGLSFIETSALDASNVESAFQTILTDIYRIVSAKSLES 182
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 139/210 (66%), Gaps = 15/210 (7%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR++T SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNK D
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKSD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA
Sbjct: 125 LTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGA------A 178
Query: 183 SGIKVGYGRGQGPSGARDGTV--SQRGGCC 210
SG G+ P+ D T S GGCC
Sbjct: 179 SG-------GERPNLKIDSTPVKSASGGCC 201
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,258,850,182
Number of Sequences: 23463169
Number of extensions: 123937650
Number of successful extensions: 444829
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19452
Number of HSP's successfully gapped in prelim test: 5104
Number of HSP's that attempted gapping in prelim test: 404725
Number of HSP's gapped (non-prelim): 25651
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 73 (32.7 bits)