BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028294
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 404 bits (1037), Expect = e-112, Method: Compositional matrix adjust.
Identities = 189/210 (90%), Positives = 201/210 (95%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVT+DGRPIKLQIW
Sbjct: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTVDGRPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNMSIML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMSIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAH+RAVSKEEG+QFAKE+GLLFLEASARTAQNVEEAFI+TAAKILQNIQ+G D N
Sbjct: 121 CDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQNIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ SGIK+GYGR QG +G RDGT+SQ GGCC
Sbjct: 181 ESSGIKIGYGRTQGAAGGRDGTISQGGGCC 210
>sp|P92963|RAB1C_ARATH Ras-related protein RABB1c OS=Arabidopsis thaliana GN=RABB1C PE=2
SV=1
Length = 211
Score = 379 bits (972), Expect = e-104, Method: Compositional matrix adjust.
Identities = 178/210 (84%), Positives = 191/210 (90%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDLAHRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAFIKTAA I + IQ+G D N
Sbjct: 121 CDLAHRRAVSTEEGEQFAKEHGLIFMEASAKTAQNVEEAFIKTAATIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVSQRGGCC 210
+ GIKVGYG GPSG RDG+ SQ GGCC
Sbjct: 181 ESYGIKVGYGGIPGPSGGRDGSTSQGGGCC 210
>sp|P36863|YPTV4_VOLCA GTP-binding protein yptV4 OS=Volvox carteri GN=YPTV4 PE=3 SV=1
Length = 213
Score = 353 bits (905), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 168/213 (78%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQ-GPSGAR--DGTVSQRGGCC 210
+ GIKVGYG G GP A+ +G + CC
Sbjct: 181 ESYGIKVGYGAGNAGPQAAKPGEGDARKSSSCC 213
>sp|Q39570|YPTC4_CHLRE GTP-binding protein YPTC4 OS=Chlamydomonas reinhardtii GN=YPTC4
PE=3 SV=1
Length = 213
Score = 350 bits (899), Expect = 3e-96, Method: Compositional matrix adjust.
Identities = 167/213 (78%), Positives = 183/213 (85%), Gaps = 3/213 (1%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ IDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHANPNM+IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANPNMTIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL HRRAV+ EEGEQFAKE+GL+FLE SARTA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 CDLTHRRAVTTEEGEQFAKEHGLIFLETSARTAHNVEEAFINTAKEIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYGRGQ-GPSGAR--DGTVSQRGGCC 210
+ GIKVGYG G GP + +G ++ CC
Sbjct: 181 ESYGIKVGYGGGNAGPQTVKPGEGGAAKSSSCC 213
>sp|P49104|RAB2B_MAIZE Ras-related protein Rab-2-B OS=Zea mays GN=RAB2B PE=2 SV=1
Length = 210
Score = 348 bits (892), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 162/190 (85%), Positives = 175/190 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGYG 190
+ GIKVGY
Sbjct: 181 ESYGIKVGYA 190
>sp|P49103|RAB2A_MAIZE Ras-related protein Rab-2-A OS=Zea mays GN=RAB2A PE=2 SV=1
Length = 209
Score = 345 bits (886), Expect = 9e-95, Method: Compositional matrix adjust.
Identities = 161/189 (85%), Positives = 174/189 (92%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+ ID +PIKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMINIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQHAN NM+IMLVGNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLASWLEDARQHANANMTIMLVGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL+HRRAVS EEGEQFAKE+GL+F+EASA+TAQNVEEAF+KTA I + IQ+G D N
Sbjct: 121 CDLSHRRAVSYEEGEQFAKEHGLIFMEASAKTAQNVEEAFVKTAGAIYKKIQDGVFDVSN 180
Query: 181 DQSGIKVGY 189
+ GIKVGY
Sbjct: 181 ESYGIKVGY 189
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 321 bits (823), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 155/212 (73%), Positives = 175/212 (82%), Gaps = 2/212 (0%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG--YGRGQGPSGARDGTVSQRGGCC 210
+ +GIK+G + G+ G GGCC
Sbjct: 181 EANGIKIGPQHAATNASHGSNQGGQQAGGGCC 212
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 149/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 320 bits (821), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 150/192 (78%), Positives = 168/192 (87%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVGYGRG 192
+ +GIK+G G
Sbjct: 181 EANGIKIGPQHG 192
>sp|Q05975|RAB2_LYMST Ras-related protein Rab-2 OS=Lymnaea stagnalis GN=RAB2 PE=2 SV=1
Length = 212
Score = 320 bits (820), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 150/188 (79%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MSYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I Q IQ+G D N
Sbjct: 121 SDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQDGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|P05712|RAB2A_RAT Ras-related protein Rab-2A OS=Rattus norvegicus GN=Rab2a PE=1 SV=1
Length = 212
Score = 319 bits (818), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 148/188 (78%), Positives = 167/188 (88%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLT+GVEFGARM+TIDG+ IKLQIW
Sbjct: 1 MAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTMGVEFGARMITIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRR+TFNHL++WLEDARQH+N NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTTWLEDARQHSNSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V KEEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQEG D N
Sbjct: 121 SDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEKIQEGVFDINN 180
Query: 181 DQSGIKVG 188
+ +GIK+G
Sbjct: 181 EANGIKIG 188
>sp|Q8WUD1|RAB2B_HUMAN Ras-related protein Rab-2B OS=Homo sapiens GN=RAB2B PE=1 SV=1
Length = 216
Score = 319 bits (817), Expect = 9e-87, Method: Compositional matrix adjust.
Identities = 154/216 (71%), Positives = 176/216 (81%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEAFI TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GPS ++ + + GCC
Sbjct: 181 EANGIKIGPQQSISTSVGPSASQRNSRDIGSNSGCC 216
>sp|O23561|RAB1A_ARATH Ras-related protein RABB1a OS=Arabidopsis thaliana GN=RABB1A PE=2
SV=1
Length = 205
Score = 315 bits (807), Expect = 1e-85, Method: Compositional matrix adjust.
Identities = 150/211 (71%), Positives = 174/211 (82%), Gaps = 8/211 (3%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
MSY Y FKYIIIGDTGVGKSCLLL+FTDKRFQ VHDLTIGVEFGA+ +TID +PIKLQIW
Sbjct: 1 MSYAYRFKYIIIGDTGVGKSCLLLKFTDKRFQAVHDLTIGVEFGAKTITIDNKPIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRS+TRSYYRG AG LLVYDITRRETFNHL+SWLE+ARQHA+ NM+ ML+GNK
Sbjct: 61 DTAGQESFRSVTRSYYRGRAGTLLVYDITRRETFNHLASWLEEARQHASENMTTMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
CDL +R VS EEGEQFA+E+GL+F+EASA+TA NVEEAF++TAA I + IQ+G +D N
Sbjct: 121 CDLEDKRTVSTEEGEQFAREHGLIFMEASAKTAHNVEEAFVETAATIYKRIQDGVVDEAN 180
Query: 181 DQSGIKVGYGRGQGPSGARDGTVS-QRGGCC 210
+ G GP G +D + S QR GCC
Sbjct: 181 EP-------GITPGPFGGKDASSSQQRRGCC 204
>sp|P36409|RAB2A_DICDI Ras-related protein Rab-2A OS=Dictyostelium discoideum GN=rab2A
PE=2 SV=2
Length = 207
Score = 315 bits (806), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 174/210 (82%), Gaps = 7/210 (3%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
Y +LFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARM+TID + IKLQIWDT
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMITIDNKAIKLQIWDT 61
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQESFRSITRSYYRG+AGALLVYDITRR+TFNHL+ WL+DAR +AN NM+I+L+GNK D
Sbjct: 62 AGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLTCWLKDARSYANSNMTIILIGNKSD 121
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
+ +RAVS EEG QFA ENGL+FLE SA+TA NVEEAF+ TA+KI + IQ+G D N+
Sbjct: 122 MESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEKIQKGDFDINNES 181
Query: 183 SGIKVGYGRGQGPSGARDGTVSQR--GGCC 210
GIK+G P+ +DGT + GGCC
Sbjct: 182 FGIKLG-----APTSKQDGTDQKPAGGGCC 206
>sp|P59279|RAB2B_MOUSE Ras-related protein Rab-2B OS=Mus musculus GN=Rab2b PE=2 SV=1
Length = 216
Score = 313 bits (801), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/216 (70%), Positives = 173/216 (80%), Gaps = 6/216 (2%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
M+Y YLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMV IDG+ IKLQIW
Sbjct: 1 MTYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVNIDGKQIKLQIW 60
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHL+SWLEDARQH++ NM IML+GNK
Sbjct: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTSWLEDARQHSSSNMVIMLIGNK 120
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL RR V +EEGE FA+E+GL+F+E SA+TA NVEEA+I TA +I + IQ+G D N
Sbjct: 121 SDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTAKEIYRKIQQGLFDVHN 180
Query: 181 DQSGIKVG----YGRGQGPSGARDGT--VSQRGGCC 210
+ +GIK+G GP + + GCC
Sbjct: 181 EANGIKIGPQQSITSSVGPCSPQQNVSDIGPDSGCC 216
>sp|P61107|RAB14_RAT Ras-related protein Rab-14 OS=Rattus norvegicus GN=Rab14 PE=1 SV=3
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q52NJ6|RAB14_PIG Ras-related protein Rab-14 OS=Sus scrofa GN=RAB14 PE=2 SV=3
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q5R8Z8|RAB14_PONAB Ras-related protein Rab-14 OS=Pongo abelii GN=RAB14 PE=2 SV=3
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q91V41|RAB14_MOUSE Ras-related protein Rab-14 OS=Mus musculus GN=Rab14 PE=1 SV=3
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P61106|RAB14_HUMAN Ras-related protein Rab-14 OS=Homo sapiens GN=RAB14 PE=1 SV=4
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|Q5ZKU5|RAB14_CHICK Ras-related protein Rab-14 OS=Gallus gallus GN=RAB14 PE=2 SV=3
Length = 215
Score = 263 bits (671), Expect = 7e-70, Method: Compositional matrix adjust.
Identities = 129/210 (61%), Positives = 158/210 (75%), Gaps = 5/210 (2%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+Y Y+FKYIIIGD GVGKSCLL QFT+K+F TIGVEFG R++ + G+ IKLQIWD
Sbjct: 7 NYSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQKIKLQIWD 66
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FR++TRSYYRGAAGAL+VYDITRR T+NHLSSWL DAR NPN I+L+GNK
Sbjct: 67 TAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLTDARNLTNPNTVIILIGNKA 126
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL +R V+ EE +QFA+ENGLLFLEASA+T +NVE+AF++ A KI QNIQ+G+LD
Sbjct: 127 DLEAQRDVTYEEAKQFAEENGLLFLEASAKTGENVEDAFLEAAKKIYQNIQDGSLDLNAA 186
Query: 182 QSGIKVGYGRGQGPSGAR--DGTVSQRGGC 209
+SG++ + P G R QR GC
Sbjct: 187 ESGVQ---HKPSAPQGGRLTSEPQPQREGC 213
>sp|P36410|RAB14_DICDI Ras-related protein Rab-14 OS=Dictyostelium discoideum GN=rab14
PE=1 SV=2
Length = 206
Score = 251 bits (642), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 116/181 (64%), Positives = 144/181 (79%)
Query: 1 MSYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIW 60
Y+Y+FKYIIIGD GVGKSCLL QFT+ +F P TIGVEFG R+V ++ + IKLQIW
Sbjct: 3 FPYEYIFKYIIIGDMGVGKSCLLHQFTENKFVPDSPHTIGVEFGTRIVDVNNKKIKLQIW 62
Query: 61 DTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNK 120
DTAGQE FR++TRSYYRGAAGALLVYDITRR T+NHL++WL DAR NPN IML+GNK
Sbjct: 63 DTAGQERFRAVTRSYYRGAAGALLVYDITRRITYNHLTTWLTDARNLTNPNTVIMLIGNK 122
Query: 121 CDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVN 180
DL +R V+ EE FAK+NGL+F+E+SA+T +NVEEAF++TA I Q++QEG +D +
Sbjct: 123 KDLEGQRDVTYEEASAFAKQNGLIFVESSAKTGENVEEAFLRTAKLIFQSVQEGNVDLIP 182
Query: 181 D 181
D
Sbjct: 183 D 183
>sp|P51146|RAB4B_RAT Ras-related protein Rab-4B OS=Rattus norvegicus GN=Rab4b PE=2 SV=1
Length = 213
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|Q91ZR1|RAB4B_MOUSE Ras-related protein Rab-4B OS=Mus musculus GN=Rab4b PE=2 SV=2
Length = 213
Score = 229 bits (583), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|P61018|RAB4B_HUMAN Ras-related protein Rab-4B OS=Homo sapiens GN=RAB4B PE=1 SV=1
Length = 213
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|P61017|RAB4B_CANFA Ras-related protein Rab-4B OS=Canis familiaris GN=RAB4B PE=2 SV=1
Length = 213
Score = 228 bits (582), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ ++L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNSLAAWLTDARTLASPNIVVILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A IL I G LD
Sbjct: 124 DLDPEREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARTILNKIDSGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|Q2TBH7|RAB4A_BOVIN Ras-related protein Rab-4A OS=Bos taurus GN=RAB4A PE=2 SV=3
Length = 218
Score = 228 bits (580), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDTDREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRAQAPSAQECG 217
>sp|Q68EK7|RAB4B_DANRE Ras-related protein Rab-4B OS=Danio rerio GN=rab4b PE=2 SV=1
Length = 213
Score = 227 bits (579), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/187 (58%), Positives = 139/187 (74%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG G GKSCLL QF + +F+ + TIGVEFG+R+V + G+ +KLQIWD
Sbjct: 4 TYDFLFKFLVIGSAGTGKSCLLHQFIENKFKQDSNHTIGVEFGSRVVNVGGKTVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+PN+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARTLASPNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF+K A I I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFLKCARSIPNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|P20338|RAB4A_HUMAN Ras-related protein Rab-4A OS=Homo sapiens GN=RAB4A PE=1 SV=3
Length = 218
Score = 227 bits (578), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 189 GSGIQYG 195
>sp|P05714|RAB4A_RAT Ras-related protein Rab-4A OS=Rattus norvegicus GN=Rab4a PE=2 SV=3
Length = 218
Score = 226 bits (576), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>sp|Q6PHI9|RAB4A_DANRE Ras-related protein Rab-4A OS=Danio rerio GN=rab4a PE=2 SV=2
Length = 213
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/187 (58%), Positives = 142/187 (75%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +KRF+ + TIGVEFG++++++ + +KLQIWD
Sbjct: 4 TYDFLFKFLVIGNAGTGKSCLLHQFIEKRFKDDSNHTIGVEFGSKIISVVNKFVKLQIWD 63
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ I+L GNK
Sbjct: 64 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVIILCGNKK 123
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 124 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFVQCARKILNKIESGELDPERM 183
Query: 182 QSGIKVG 188
SGI+ G
Sbjct: 184 GSGIQYG 190
>sp|P56371|RAB4A_MOUSE Ras-related protein Rab-4A OS=Mus musculus GN=Rab4a PE=1 SV=2
Length = 218
Score = 226 bits (575), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 113/209 (54%), Positives = 147/209 (70%), Gaps = 9/209 (4%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
+YD+LFK+++IG+ G GKSCLL QF +K+F+ + TIGVEFG++++ + G+ +KLQIWD
Sbjct: 9 TYDFLFKFLVIGNAGTGKSCLLHQFIEKKFKDDSNHTIGVEFGSKIINVGGKYVKLQIWD 68
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRS+TRSYYRGAAGALLVYDIT RET+N L++WL DAR A+ N+ ++L GNK
Sbjct: 69 TAGQERFRSVTRSYYRGAAGALLVYDITSRETYNALTNWLTDARMLASQNIVLILCGNKK 128
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVND 181
DL R V+ E +FA+EN L+FLE SA T +NVEEAF++ A KIL I+ G LD
Sbjct: 129 DLDADREVTFLEASRFAQENELMFLETSALTGENVEEAFMQCARKILNKIESGELDPERM 188
Query: 182 QSGIKVGYG---------RGQGPSGARDG 201
SGI+ G R Q PS G
Sbjct: 189 GSGIQYGDAALRQLRSPRRTQAPSAQECG 217
>sp|Q559X6|RAB2B_DICDI Ras-related protein Rab-2B OS=Dictyostelium discoideum GN=rab2B
PE=3 SV=1
Length = 202
Score = 222 bits (565), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 100/171 (58%), Positives = 135/171 (78%)
Query: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWD 61
SY++LFKYI++GD+ VGKS LLLQF DKRF P D TIGVEFG+R + I+ + IKLQIWD
Sbjct: 20 SYEHLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWD 79
Query: 62 TAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKC 121
TAGQE FRSITR+YYRGA A++VYDITRR++F L+SWL D R+ ++ +++ +L+GNK
Sbjct: 80 TAGQEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRKFSSCDVTTVLIGNKA 139
Query: 122 DLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQ 172
DL R VS E ++FA++NGL+F E SA+TA NV+EAF K+ +IL+ ++
Sbjct: 140 DLEANRQVSTSEAKEFAEKNGLMFFETSAKTALNVDEAFEKSTEQILKKLE 190
>sp|Q9FK68|RAA1C_ARATH Ras-related protein RABA1c OS=Arabidopsis thaliana GN=RABA1C PE=1
SV=1
Length = 216
Score = 209 bits (532), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +D + IK QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ +WL++ R H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+ + FA++ L F+E SA A NVE AF + +I + + A++A ++
Sbjct: 130 LRHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAFAEVLTQIHHIVSKKAMEAASES 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + +G +D + ++GGCCS
Sbjct: 190 ANVP---SKGDKIDIGKDVSAVKKGGCCS 215
>sp|P28185|RAA1A_ARATH Ras-related protein RABA1a OS=Arabidopsis thaliana GN=RABA1A PE=1
SV=1
Length = 216
Score = 207 bits (528), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 137/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + ++G+ +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTTKVEGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALL+YD+TR TF + + WL + R H +PN+ +ML+GNKCD
Sbjct: 70 AGQERYRAITSAYYRGAVGALLIYDVTRHATFENAARWLRELRGHTDPNIVVMLIGNKCD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV EE + FA+ L F+E SA A NVE AF + +I + + + ++D +
Sbjct: 130 LRHLVAVKTEEAKAFAERESLYFMETSALDATNVENAFTEVLTQIHKIVSKRSVDGGGES 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ + G+G+ + DG+V +R GCCS
Sbjct: 190 ADLP---GKGETINVKEDGSVLKRMGCCS 215
>sp|Q40194|RB11D_LOTJA Ras-related protein Rab11D OS=Lotus japonicus GN=RAB11D PE=2 SV=1
Length = 218
Score = 207 bits (527), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 102/210 (48%), Positives = 138/210 (65%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + +D + +K QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATKTLNVDAKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF + + WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENAARWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ FA+ L F+E SA A NVE AF + +I + + + A++A
Sbjct: 130 LRHLVAVPTEDGKSFAERESLYFMETSALEATNVENAFTEVLTQIYRIVSKRAVEA--GD 187
Query: 183 SGIKVGY-GRGQGPSGARDGTVSQRGGCCS 211
SG G +GQ + D +V +R GCCS
Sbjct: 188 SGSSSGLPSKGQTINVKEDSSVLKRFGCCS 217
>sp|Q39434|RB2BV_BETVU Ras-related protein Rab2BV OS=Beta vulgaris GN=RAB2BV PE=2 SV=1
Length = 214
Score = 207 bits (527), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 104/210 (49%), Positives = 139/210 (66%), Gaps = 6/210 (2%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF+++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFDNVQRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS+E+G+ A++ GL FLE SA A N+E+AF +I I + AL A
Sbjct: 129 LKHLRAVSEEDGQALAEKEGLSFLETSALEAVNIEKAFQTILTEIYHIISKKALAAQEAS 188
Query: 183 SGIKVGYGRGQGPS-GARDGTVSQRGGCCS 211
S + GQG + D + +QR CCS
Sbjct: 189 SNLP-----GQGTTINVADASANQRRSCCS 213
>sp|P40393|RIC2_ORYSJ Ras-related protein RIC2 OS=Oryza sativa subsp. japonica GN=RIC2
PE=2 SV=2
Length = 217
Score = 207 bits (527), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 139/209 (66%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 11 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDT 70
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF ++ WL++ R H +PN+ +MLVGNK D
Sbjct: 71 AGQERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPNIVVMLVGNKSD 130
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV +EG+ FA+ L F+E SA + NVE AF + +I + + + +++A +D
Sbjct: 131 LRHLVAVQTDEGKAFAERESLYFMETSALESTNVENAFAEVLTQIYRIVSKRSVEAGDDA 190
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
G G+G+ + D + ++GGCCS
Sbjct: 191 GS---GPGKGEKINIKDDVSAVKKGGCCS 216
>sp|P17610|YPT3_SCHPO GTP-binding protein ypt3 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt3 PE=1 SV=1
Length = 214
Score = 206 bits (525), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 101/208 (48%), Positives = 133/208 (63%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL++FT F TIGVEF R + +D + IK QIWDT
Sbjct: 7 YDYLFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDT 66
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GAL+VYDIT++ +F+++ WL++ R+HA+ N+ IMLVGNK D
Sbjct: 67 AGQERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSNIVIMLVGNKTD 126
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H RAVS EE + FA EN L F+E SA A NVEEAF +I + + +L+A +D
Sbjct: 127 LLHLRAVSTEEAQAFAAENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEAGDDG 186
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
G P+ CC
Sbjct: 187 VHPTAGQTLNIAPTMNDLNKKKSSSQCC 214
>sp|Q40195|RB11E_LOTJA Ras-related protein Rab11E OS=Lotus japonicus GN=RAB11E PE=2 SV=1
Length = 218
Score = 204 bits (520), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 135/209 (64%), Gaps = 1/209 (0%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF + + IDG+ IK QIWDT
Sbjct: 10 YDYLFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSLNIDGKVIKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TR TF WL++ R H +PN+ +ML+GNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRSTTFETAGRWLKELRDHTDPNIVVMLIGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H VS E+G+ FA++ L F+E SA A NVE AF + +I + + + A++A D+
Sbjct: 130 LRHLVTVSTEDGKAFAEKESLYFMETSALEATNVENAFSEVLTQIYRIVSKRAVEA-GDR 188
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
V +GQ + D +V R CCS
Sbjct: 189 PSTSVVPSQGQTINVNEDSSVLNRYRCCS 217
>sp|Q9LNW1|RAA2B_ARATH Ras-related protein RABA2b OS=Arabidopsis thaliana GN=RABA2B PE=2
SV=2
Length = 214
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/209 (48%), Positives = 137/209 (65%), Gaps = 4/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS +L +FT F TIGVEF R + ++G+ +K QIWDT
Sbjct: 9 YDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRTLQVEGKTVKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+R+TF ++ WL + R HA+ N+ IM+ GNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKRQTFENVLRWLRELRDHADSNIVIMMAGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R+V+ E+G A++ GL FLE SA A N+E+AF ++I I + AL A +
Sbjct: 129 LNHLRSVADEDGRSLAEKEGLSFLETSALEATNIEKAFQTILSEIYHIISKKAL-AAQEA 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+G G G S D + + R GCCS
Sbjct: 188 AGNLPGQGTAINIS---DSSATNRKGCCS 213
>sp|Q39572|YPTC6_CHLRE Ras-related protein YPTC6 OS=Chlamydomonas reinhardtii GN=YPTC6
PE=3 SV=1
Length = 216
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 103/210 (49%), Positives = 136/210 (64%), Gaps = 3/210 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ IK QIWDT
Sbjct: 9 YDYLFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDT 68
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYDIT+ TF ++ WL++ R HA+ N+ IMLVGNK D
Sbjct: 69 AGQERYRAITSAYYRGAVGALLVYDITKSVTFENVERWLKELRDHADSNIVIMLVGNKSD 128
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H R V E + F + GL F+E SA + NVE+AF + +I + + LD+ +++
Sbjct: 129 LKHLRDVQTEVAQAFCEREGLSFIETSALESTNVEKAFQQILTEIYHIVSKKVLDSEDNR 188
Query: 183 SGIKVGYGRGQ-GPSGARDGTVSQRGGCCS 211
K+G GR A D ++GGCCS
Sbjct: 189 P--KIGEGRDVIVIDNAHDDGGKKKGGCCS 216
>sp|Q39222|RAA1B_ARATH Ras-related protein RABA1b OS=Arabidopsis thaliana GN=RABA1B PE=2
SV=1
Length = 216
Score = 201 bits (512), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 3/209 (1%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKS LL +FT F TIGVEF R + +DG+ +K QIWDT
Sbjct: 10 YDYLFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDT 69
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE +R+IT +YYRGA GALLVYD+TRR TF ++ WL++ + H +PN+ +MLVGNK D
Sbjct: 70 AGQERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPNIVVMLVGNKSD 129
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L H AV E+G+ +A++ L F+E SA A NVE+AF + +I + + ++A D
Sbjct: 130 LRHLLAVPTEDGKSYAEQESLCFMETSALEATNVEDAFAEVLTQIYRITSKKQVEAGEDG 189
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCCS 211
+ +G+ D + ++ GCCS
Sbjct: 190 NA---SVPKGEKIEVKNDVSALKKLGCCS 215
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 201 bits (510), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 96/208 (46%), Positives = 138/208 (66%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 124
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE+AF+ AA+I + + GA +++
Sbjct: 125 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGSEK 184
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S + + S GGCC
Sbjct: 185 SNVNI----------QSTPVKSSGGGCC 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 140/208 (67%), Gaps = 10/208 (4%)
Query: 3 YDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDLTIGVEFGARMVTIDGRPIKLQIWDT 62
YDYLFK ++IGD+GVGKSCLLL+F D + + TIGV+F R + +DG+ IKLQIWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 63 AGQESFRSITRSYYRGAAGALLVYDITRRETFNHLSSWLEDARQHANPNMSIMLVGNKCD 122
AGQE FR+IT SYYRGA G ++VYD+T +E+FN++ WL++ ++A+ N++ +LVGNKCD
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNKLLVGNKCD 127
Query: 123 LAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQNIQEGALDAVNDQ 182
L ++ V ++FA G+ FLE SA+ A NVE++F+ AA+I + + GA ++
Sbjct: 128 LTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAEK 187
Query: 183 SGIKVGYGRGQGPSGARDGTVSQRGGCC 210
S +K+ Q + G GGCC
Sbjct: 188 SNVKI-----QSTPVKQSG-----GGCC 205
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.136 0.399
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,279,823
Number of Sequences: 539616
Number of extensions: 2970370
Number of successful extensions: 12421
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1020
Number of HSP's successfully gapped in prelim test: 177
Number of HSP's that attempted gapping in prelim test: 10435
Number of HSP's gapped (non-prelim): 1238
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 59 (27.3 bits)