Query 028297
Match_columns 211
No_of_seqs 240 out of 1578
Neff 7.8
Searched_HMMs 29240
Date Mon Mar 25 15:15:07 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028297.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028297hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3s5j_B Ribose-phosphate pyroph 100.0 4.8E-35 1.6E-39 252.7 8.5 186 3-206 45-273 (326)
2 3dah_A Ribose-phosphate pyroph 100.0 7.1E-36 2.4E-40 257.5 -0.2 186 3-206 49-276 (319)
3 1u9y_A RPPK;, ribose-phosphate 100.0 7.8E-34 2.7E-38 241.9 4.8 186 3-207 42-266 (284)
4 1dku_A Protein (phosphoribosyl 100.0 1.4E-33 4.7E-38 243.6 6.4 187 3-207 51-278 (317)
5 3lrt_A Ribose-phosphate pyroph 100.0 2.3E-33 7.8E-38 238.8 7.0 182 4-207 43-263 (286)
6 2ji4_A Phosphoribosyl pyrophos 100.0 1.2E-32 4.2E-37 242.6 6.2 196 3-206 74-332 (379)
7 2dy0_A APRT, adenine phosphori 100.0 2.8E-30 9.5E-35 207.8 17.8 165 43-207 21-189 (190)
8 1zn8_A APRT, adenine phosphori 100.0 7.5E-30 2.6E-34 203.4 18.4 163 44-206 13-180 (180)
9 1g2q_A Adenine phosphoribosylt 100.0 1.1E-29 3.9E-34 203.8 18.5 164 44-208 14-183 (187)
10 1qb7_A APRT, adenine phosphori 100.0 2.8E-29 9.7E-34 208.5 18.2 164 46-209 28-209 (236)
11 1l1q_A Adenine phosphoribosylt 100.0 3.1E-28 1.1E-32 195.3 16.7 164 44-207 12-180 (186)
12 3m3h_A OPRT, oprtase, orotate 99.9 2.9E-26 9.9E-31 189.9 11.3 145 53-211 54-204 (234)
13 3dez_A OPRT, oprtase, orotate 99.9 9.9E-26 3.4E-30 187.6 12.3 142 56-211 69-216 (243)
14 2p1z_A Phosphoribosyltransfera 99.9 1.1E-24 3.6E-29 173.9 14.2 143 53-209 31-178 (180)
15 2yzk_A OPRT, oprtase, orotate 99.9 4.6E-25 1.6E-29 175.7 11.8 141 56-211 27-172 (178)
16 2wns_A Orotate phosphoribosylt 99.9 6.7E-25 2.3E-29 178.5 12.3 142 56-211 31-177 (205)
17 1y0b_A Xanthine phosphoribosyl 99.9 4.4E-24 1.5E-28 172.2 16.9 147 63-209 31-185 (197)
18 3mjd_A Orotate phosphoribosylt 99.9 3.3E-24 1.1E-28 177.3 12.2 146 51-211 46-210 (232)
19 1o57_A PUR operon repressor; p 99.9 1.2E-23 4E-28 179.5 15.2 151 57-208 102-255 (291)
20 1lh0_A OMP synthase; loop clos 99.9 5.9E-24 2E-28 173.9 11.8 143 53-211 30-190 (213)
21 1vch_A Phosphoribosyltransfera 99.9 6.7E-24 2.3E-28 168.0 11.8 157 43-206 11-173 (175)
22 2aee_A OPRT, oprtase, orotate 99.9 2.4E-23 8.2E-28 169.9 12.7 141 56-210 37-183 (211)
23 3n2l_A OPRT, oprtase, orotate 99.9 2E-23 6.9E-28 173.0 12.0 144 52-211 54-215 (238)
24 3qw4_B UMP synthase; N-termina 99.9 2.4E-23 8.3E-28 187.2 12.4 141 56-210 287-430 (453)
25 2ps1_A Orotate phosphoribosylt 99.9 4.2E-23 1.4E-27 170.2 12.0 143 54-211 35-202 (226)
26 3hvu_A Hypoxanthine phosphorib 99.8 3.5E-19 1.2E-23 144.6 12.7 137 46-191 16-159 (204)
27 1vdm_A Purine phosphoribosyltr 99.8 6.7E-19 2.3E-23 136.1 12.3 118 65-190 6-125 (153)
28 1hgx_A HGXPRTASE, hypoxanthine 99.8 8.2E-19 2.8E-23 139.9 11.7 129 58-194 8-141 (183)
29 1fsg_A HGPRTASE, hypoxanthine- 99.8 2.1E-18 7.1E-23 142.7 11.3 145 46-190 31-184 (233)
30 1z7g_A HGPRT, HGPRTASE, hypoxa 99.8 2.5E-18 8.7E-23 140.8 9.3 135 46-190 17-168 (217)
31 2geb_A Hypoxanthine-guanine ph 99.7 2.8E-17 9.5E-22 131.3 14.6 123 62-191 14-141 (185)
32 1pzm_A HGPRT, hypoxanthine-gua 99.7 1.2E-17 4.1E-22 136.2 12.2 125 59-190 22-160 (211)
33 2jbh_A Phosphoribosyltransfera 99.7 1.1E-17 3.6E-22 137.7 11.5 133 48-190 27-176 (225)
34 3o7m_A Hypoxanthine phosphorib 99.7 2.2E-17 7.6E-22 132.2 11.6 124 59-191 7-137 (186)
35 3ozf_A Hypoxanthine-guanine-xa 99.7 4.7E-18 1.6E-22 141.6 7.7 142 50-191 49-199 (250)
36 1tc1_A Protein (hypoxanthine p 99.7 3.5E-17 1.2E-21 134.3 12.2 125 59-190 6-145 (220)
37 1wd5_A Hypothetical protein TT 99.7 4.4E-17 1.5E-21 132.4 12.4 133 74-206 10-179 (208)
38 1yfz_A Hypoxanthine-guanine ph 99.7 5.8E-17 2E-21 131.4 13.1 122 63-191 35-161 (205)
39 1a3c_A PYRR, pyrimidine operon 99.7 3.6E-17 1.2E-21 129.9 10.7 122 63-188 6-139 (181)
40 2ywu_A Hypoxanthine-guanine ph 99.7 1.5E-16 5E-21 126.9 13.3 121 64-191 13-138 (181)
41 3ohp_A Hypoxanthine phosphorib 99.7 4.1E-16 1.4E-20 123.9 13.6 120 64-190 8-133 (177)
42 1ufr_A TT1027, PYR mRNA-bindin 99.7 3.6E-16 1.2E-20 124.2 11.6 119 65-188 8-137 (181)
43 1nul_A XPRT, xanthine-guanine 99.7 3.4E-16 1.1E-20 121.3 9.9 111 64-190 6-118 (152)
44 1w30_A PYRR bifunctional prote 99.6 1.9E-15 6.5E-20 122.3 10.5 121 63-188 15-153 (201)
45 1ecf_A Glutamine phosphoribosy 99.6 1.8E-15 6.3E-20 137.8 9.8 115 72-187 277-398 (504)
46 2xbu_A Hypoxanthine-guanine ph 99.6 7.7E-15 2.6E-19 120.4 10.7 125 64-189 8-161 (221)
47 3acd_A Hypoxanthine-guanine ph 99.5 1E-13 3.5E-18 110.4 12.6 120 63-189 12-136 (181)
48 1ao0_A Glutamine phosphoribosy 99.5 2.3E-14 7.7E-19 129.2 9.1 115 69-185 258-375 (459)
49 1dqn_A Guanine phosphoribosylt 99.3 1.1E-12 3.6E-17 108.2 6.9 110 64-189 35-154 (230)
50 1o5o_A Uracil phosphoribosyltr 99.3 3.9E-12 1.3E-16 104.1 9.2 98 87-195 84-183 (221)
51 1i5e_A Uracil phosphoribosyltr 99.3 6.1E-12 2.1E-16 102.2 9.5 99 86-195 71-171 (209)
52 2ehj_A Uracil phosphoribosyltr 99.2 1.1E-10 3.9E-15 94.6 11.2 97 87-195 71-170 (208)
53 2e55_A Uracil phosphoribosyltr 99.2 1.6E-10 5.6E-15 93.7 11.4 96 87-195 70-168 (208)
54 1v9s_A Uracil phosphoribosyltr 99.1 7.5E-11 2.6E-15 95.7 7.6 98 87-195 71-170 (208)
55 1bd3_D Uprtase, uracil phospho 99.1 2.5E-10 8.7E-15 94.5 10.1 111 87-210 104-223 (243)
56 3dmp_A Uracil phosphoribosyltr 99.0 1E-09 3.4E-14 89.5 7.6 96 87-195 79-178 (217)
57 1xtt_A Probable uracil phospho 98.8 1.3E-08 4.5E-13 82.9 8.3 102 87-195 73-180 (216)
58 3dah_A Ribose-phosphate pyroph 88.3 3.7 0.00013 34.8 10.0 76 95-184 15-94 (319)
59 1u9y_A RPPK;, ribose-phosphate 86.8 3.5 0.00012 34.1 8.9 73 97-183 10-85 (284)
60 3s5j_B Ribose-phosphate pyroph 84.4 9.4 0.00032 32.3 10.6 74 96-183 12-89 (326)
61 1dku_A Protein (phosphoribosyl 79.7 18 0.00062 30.3 10.6 78 94-185 16-97 (317)
62 2ji4_A Phosphoribosyl pyrophos 78.4 8.6 0.0003 33.2 8.4 73 97-183 39-118 (379)
63 3lrt_A Ribose-phosphate pyroph 74.2 5.5 0.00019 33.1 5.8 71 98-184 11-85 (286)
64 3to5_A CHEY homolog; alpha(5)b 57.9 13 0.00044 26.9 4.3 30 147-179 11-40 (134)
65 3hix_A ALR3790 protein; rhodan 57.3 12 0.0004 25.5 3.9 32 146-180 50-81 (106)
66 3ilm_A ALR3790 protein; rhodan 53.8 15 0.00052 26.6 4.2 33 145-180 53-85 (141)
67 2jtq_A Phage shock protein E; 53.2 20 0.0007 23.0 4.4 33 146-181 39-71 (85)
68 3tum_A Shikimate dehydrogenase 52.1 22 0.00074 29.0 5.3 33 146-182 123-155 (269)
69 3foj_A Uncharacterized protein 50.9 28 0.00097 23.1 5.0 32 145-180 53-84 (100)
70 3t4e_A Quinate/shikimate dehyd 48.5 26 0.00088 29.3 5.3 33 146-182 146-178 (312)
71 3iwh_A Rhodanese-like domain p 47.2 32 0.0011 23.4 4.8 51 145-202 53-103 (103)
72 3f6p_A Transcriptional regulat 45.6 41 0.0014 22.4 5.3 28 148-178 2-29 (120)
73 3gk5_A Uncharacterized rhodane 45.0 25 0.00085 23.9 4.0 32 145-180 52-83 (108)
74 1gmx_A GLPE protein; transfera 44.9 18 0.0006 24.6 3.1 33 145-180 55-87 (108)
75 3gl9_A Response regulator; bet 44.7 43 0.0015 22.4 5.3 27 149-178 3-29 (122)
76 3eod_A Protein HNR; response r 43.6 47 0.0016 22.2 5.4 29 147-178 6-34 (130)
77 3eme_A Rhodanese-like domain p 42.1 38 0.0013 22.5 4.5 32 145-180 53-84 (103)
78 4hwg_A UDP-N-acetylglucosamine 41.9 69 0.0024 27.1 7.1 47 68-114 77-123 (385)
79 3mm4_A Histidine kinase homolo 40.8 48 0.0016 24.9 5.4 29 146-177 59-87 (206)
80 3h5i_A Response regulator/sens 40.3 50 0.0017 22.6 5.1 28 147-177 4-31 (140)
81 1r6j_A Syntenin 1; PDZ, membra 39.5 37 0.0013 22.3 4.0 34 145-178 41-74 (82)
82 3fbt_A Chorismate mutase and s 38.2 37 0.0013 27.8 4.6 33 146-182 120-152 (282)
83 3tnl_A Shikimate dehydrogenase 38.0 50 0.0017 27.5 5.4 33 146-182 152-184 (315)
84 3pwz_A Shikimate dehydrogenase 37.9 48 0.0017 26.9 5.2 32 146-181 118-149 (272)
85 1o97_C Electron transferring f 37.7 59 0.002 26.3 5.7 42 72-113 99-144 (264)
86 1efv_B Electron transfer flavo 36.5 63 0.0021 26.0 5.6 42 72-113 103-148 (255)
87 3g5j_A Putative ATP/GTP bindin 36.5 41 0.0014 23.2 4.1 31 147-180 87-118 (134)
88 3lte_A Response regulator; str 36.3 65 0.0022 21.5 5.1 28 147-177 5-32 (132)
89 3jyo_A Quinate/shikimate dehyd 36.0 54 0.0018 26.7 5.2 32 146-181 125-156 (283)
90 1efp_B ETF, protein (electron 33.6 61 0.0021 26.0 5.1 42 72-113 100-145 (252)
91 3o8q_A Shikimate 5-dehydrogena 33.4 60 0.0021 26.4 5.1 32 146-181 124-155 (281)
92 2j48_A Two-component sensor ki 33.3 88 0.003 19.9 5.3 27 148-177 1-27 (119)
93 3ia7_A CALG4; glycosysltransfe 32.8 98 0.0033 25.3 6.5 41 73-114 90-130 (402)
94 3otg_A CALG1; calicheamicin, T 32.4 90 0.0031 25.7 6.2 39 74-114 119-157 (412)
95 3t6k_A Response regulator rece 32.3 91 0.0031 21.1 5.4 29 147-178 3-31 (136)
96 1tq1_A AT5G66040, senescence-a 31.6 29 0.00098 24.4 2.5 33 146-181 80-112 (129)
97 3gt7_A Sensor protein; structu 31.0 84 0.0029 21.9 5.1 28 147-177 6-33 (154)
98 2hhg_A Hypothetical protein RP 30.4 51 0.0018 23.1 3.8 32 146-180 84-115 (139)
99 3rsc_A CALG2; TDP, enediyne, s 30.3 98 0.0033 25.6 6.1 42 73-115 106-147 (415)
100 4fzr_A SSFS6; structural genom 30.2 1.3E+02 0.0044 24.7 6.9 41 72-114 110-150 (398)
101 2k0z_A Uncharacterized protein 29.9 62 0.0021 21.8 4.0 30 146-178 54-83 (110)
102 3h1g_A Chemotaxis protein CHEY 29.6 63 0.0022 21.7 4.1 28 147-177 4-31 (129)
103 2fsx_A RV0390, COG0607: rhodan 29.2 34 0.0012 24.6 2.7 32 146-180 78-109 (148)
104 3hdv_A Response regulator; PSI 29.2 95 0.0032 20.8 5.0 29 147-178 6-34 (136)
105 3grc_A Sensor protein, kinase; 28.9 1.1E+02 0.0038 20.5 5.4 28 147-177 5-32 (140)
106 3gge_A PDZ domain-containing p 28.7 83 0.0029 21.4 4.4 44 143-186 45-88 (95)
107 4dad_A Putative pilus assembly 28.7 71 0.0024 21.8 4.3 31 146-179 18-49 (146)
108 3m6m_D Sensory/regulatory prot 28.7 79 0.0027 21.8 4.6 29 147-178 13-41 (143)
109 2b4a_A BH3024; flavodoxin-like 28.5 1.2E+02 0.004 20.4 5.4 29 146-177 13-41 (138)
110 1vee_A Proline-rich protein fa 28.4 33 0.0011 24.3 2.4 31 147-180 73-103 (134)
111 1i16_A Interleukin 16, LCF; cy 28.2 61 0.0021 22.8 3.8 40 144-183 75-114 (130)
112 1wv9_A Rhodanese homolog TT165 27.9 84 0.0029 20.4 4.3 30 146-180 52-81 (94)
113 2ayx_A Sensor kinase protein R 27.8 42 0.0015 26.3 3.2 32 146-180 9-40 (254)
114 3s2u_A UDP-N-acetylglucosamine 27.7 1.4E+02 0.0049 24.6 6.7 34 79-114 86-121 (365)
115 2yjn_A ERYCIII, glycosyltransf 27.7 1E+02 0.0034 26.1 5.8 38 75-114 134-171 (441)
116 3hzh_A Chemotaxis response reg 27.4 1.1E+02 0.0037 21.3 5.2 30 147-179 35-64 (157)
117 2p6p_A Glycosyl transferase; X 27.2 1.5E+02 0.0052 24.1 6.7 39 74-114 96-134 (384)
118 1qxn_A SUD, sulfide dehydrogen 27.1 38 0.0013 24.1 2.6 33 145-180 79-111 (137)
119 3dfz_A SIRC, precorrin-2 dehyd 26.6 67 0.0023 25.3 4.1 30 146-179 29-58 (223)
120 1kyq_A Met8P, siroheme biosynt 26.5 84 0.0029 25.6 4.8 30 146-179 11-40 (274)
121 3i42_A Response regulator rece 25.9 92 0.0031 20.6 4.4 26 148-176 3-28 (127)
122 2iya_A OLEI, oleandomycin glyc 24.9 1.6E+02 0.0056 24.4 6.6 39 74-114 98-136 (424)
123 3flh_A Uncharacterized protein 24.8 75 0.0026 21.9 3.8 30 145-177 68-99 (124)
124 3d1p_A Putative thiosulfate su 24.7 68 0.0023 22.5 3.6 32 146-180 89-120 (139)
125 3ih5_A Electron transfer flavo 24.6 77 0.0026 24.7 4.1 42 72-113 78-120 (217)
126 3fro_A GLGA glycogen synthase; 24.3 2.7E+02 0.0094 22.6 7.9 31 83-113 120-150 (439)
127 3eul_A Possible nitrate/nitrit 24.1 1.2E+02 0.0041 20.8 4.8 28 146-176 13-40 (152)
128 2rjn_A Response regulator rece 23.9 1.4E+02 0.0048 20.5 5.2 28 147-177 6-33 (154)
129 1wi4_A Synip, syntaxin binding 23.9 81 0.0028 21.4 3.7 31 145-175 60-90 (109)
130 1mvo_A PHOP response regulator 23.8 1.5E+02 0.0052 19.6 5.3 27 148-177 3-29 (136)
131 3lua_A Response regulator rece 23.7 1.6E+02 0.0056 19.7 5.4 29 147-178 3-32 (140)
132 3dzc_A UDP-N-acetylglucosamine 23.6 1.5E+02 0.0052 24.8 6.1 44 71-114 97-141 (396)
133 2hcu_A 3-isopropylmalate dehyd 23.6 41 0.0014 26.6 2.3 42 147-188 84-125 (213)
134 2vdc_G Glutamate synthase [NAD 23.5 1E+02 0.0035 26.7 5.1 34 146-183 262-295 (456)
135 1nu0_A Hypothetical protein YQ 23.4 1.8E+02 0.0062 21.0 5.7 41 77-117 45-97 (138)
136 3kto_A Response regulator rece 23.3 1.1E+02 0.0037 20.6 4.4 28 148-178 6-33 (136)
137 3cg4_A Response regulator rece 23.3 1.6E+02 0.0056 19.6 5.4 28 147-177 6-33 (142)
138 3nhv_A BH2092 protein; alpha-b 23.1 1.5E+02 0.005 21.1 5.2 30 145-177 69-100 (144)
139 3hv2_A Response regulator/HD d 23.0 1.2E+02 0.0041 20.9 4.7 29 146-177 12-40 (153)
140 1tmy_A CHEY protein, TMY; chem 22.9 1.2E+02 0.0041 19.6 4.5 28 148-178 2-29 (120)
141 3snk_A Response regulator CHEY 22.8 1.1E+02 0.0038 20.5 4.4 26 147-175 13-38 (135)
142 3don_A Shikimate dehydrogenase 22.7 47 0.0016 27.1 2.6 32 146-181 115-146 (277)
143 2egg_A AROE, shikimate 5-dehyd 22.4 1.2E+02 0.0042 24.6 5.1 32 146-181 139-170 (297)
144 2a9o_A Response regulator; ess 22.3 1.6E+02 0.0055 18.8 5.1 26 149-177 2-27 (120)
145 2d92_A INAD-like protein; PDZ 22.3 1.7E+02 0.0058 19.5 5.1 37 145-181 63-99 (108)
146 3ot5_A UDP-N-acetylglucosamine 22.3 1.5E+02 0.0052 24.9 5.9 43 72-114 101-144 (403)
147 2iyf_A OLED, oleandomycin glyc 22.2 2.1E+02 0.0073 23.6 6.8 40 73-114 92-131 (430)
148 3phh_A Shikimate dehydrogenase 22.0 1.2E+02 0.0041 24.5 4.9 28 148-180 118-145 (269)
149 3kyj_B CHEY6 protein, putative 21.8 97 0.0033 21.1 3.9 28 147-177 12-40 (145)
150 5nul_A Flavodoxin; electron tr 21.8 1.2E+02 0.0041 20.9 4.4 43 146-188 77-121 (138)
151 3rqi_A Response regulator prot 21.7 1.6E+02 0.0054 21.2 5.3 28 147-177 6-33 (184)
152 2eg4_A Probable thiosulfate su 21.7 1.3E+02 0.0043 23.1 4.9 31 146-180 182-212 (230)
153 3oti_A CALG3; calicheamicin, T 21.1 1.1E+02 0.0039 25.1 4.8 40 73-114 118-157 (398)
154 3i2v_A Adenylyltransferase and 21.1 1.1E+02 0.0037 20.7 4.0 32 147-181 71-108 (127)
155 3f6c_A Positive transcription 21.0 1.5E+02 0.005 19.6 4.7 26 150-178 3-28 (134)
156 3tsa_A SPNG, NDP-rhamnosyltran 21.0 2.1E+02 0.0073 23.2 6.5 39 74-114 103-141 (391)
157 3o46_A Maguk P55 subfamily mem 21.0 1.3E+02 0.0043 19.4 4.2 32 145-176 47-78 (93)
158 1o63_A ATP phosphoribosyltrans 21.0 27 0.00094 27.8 0.8 20 154-180 146-165 (219)
159 1jbe_A Chemotaxis protein CHEY 21.0 1.3E+02 0.0044 19.7 4.3 26 148-176 4-29 (128)
160 3fet_A Electron transfer flavo 20.9 1.3E+02 0.0043 22.4 4.5 40 72-113 58-98 (166)
161 1qkk_A DCTD, C4-dicarboxylate 20.8 1.7E+02 0.0058 20.1 5.1 28 147-177 2-29 (155)
162 1ve4_A ATP phosphoribosyltrans 20.4 29 0.00098 27.4 0.8 19 155-180 152-170 (206)
No 1
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=100.00 E-value=4.8e-35 Score=252.66 Aligned_cols=186 Identities=20% Similarity=0.160 Sum_probs=146.3
Q ss_pred cccccceeeEEEeeecccCcccceeeeeeeee-e--------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297 3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLF-F--------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH 67 (211)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~--------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~ 67 (211)
.|||||+|||||||++.| +|+++|||+ + ++||++|++|+++..|+++|+.+.+++++...
T Consensus 45 ~esvrg~dV~iiqs~~~p-----~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~repisak~vA~lL~~~ 119 (326)
T 3s5j_B 45 GESVRGEDVYIVQSGCGE-----INDNLMELLIMINACKIASASRVTAVIPCFPYARQDKKDKSRAPISAKLVANMLSVA 119 (326)
T ss_dssp CSCCTTCEEEEECCCCSC-----HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCTTSSCCCHHHHHHHHHHHH
T ss_pred CCCcCCCcEEEEecCCCC-----ccHHHHHHHHHHHHHHhcCCcEEEEeccCccccccCCcCCCCCCEeHHHHHHHHHHc
Confidence 489999999999999866 899999983 3 79999999999999999999999999998643
Q ss_pred HHHH-H---------------------HHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297 68 KAFK-D---------------------TVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP 121 (211)
Q Consensus 68 ~~~~-~---------------------~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~ 121 (211)
+..+ . ....+++++.+ .+.++|++|+.||+.+|..+|+.|++|+.+++|+++.+
T Consensus 120 G~drvit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~~~~~i~K~r~~~ 199 (326)
T 3s5j_B 120 GADHIITMDLHASQIQGFFDIPVDNLYAEPAVLKWIRENISEWRNCTIVSPDAGGAKRVTSIADRLNVDFALIHKERKKA 199 (326)
T ss_dssp TCSEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHHHCTTGGGCEEEESSGGGHHHHHHHHHHHTCEEEEEEEC----
T ss_pred CCCEEEEEeCCChHHHhhcCCceeceEcHHHHHHHHHHhcCcCCCcEEEEECCCchHHHHHHHHHcCCCEEEEEEEecCC
Confidence 2111 0 12333333432 23579999999999999999999999999998877544
Q ss_pred CceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCe
Q 028297 122 GEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPL 199 (211)
Q Consensus 122 ~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l 199 (211)
+... .+.+ .+. .+||+|+||||+++||+|+.++++.|+++||++|+++++|+.++ +.++|++.++
T Consensus 200 ~~v~-----------~~~l-~g~-v~gk~viIVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~~~~a~e~l~~~~i 266 (326)
T 3s5j_B 200 NEVD-----------RMVL-VGD-VKDRVAILVDDMADTCGTICHAADKLLSAGATRVYAILTHGIFSGPAISRINNACF 266 (326)
T ss_dssp ---C-----------CEEE-ESC-CTTSEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHHHHSCC
T ss_pred Ceee-----------EEec-ccc-CCCCEEEEEccccCCcHHHHHHHHHHHHcCCCEEEEEEEecccCchHHHHHhhCCC
Confidence 4321 1222 245 49999999999999999999999999999999999999999876 7888876677
Q ss_pred EEEEccc
Q 028297 200 YILVEPR 206 (211)
Q Consensus 200 ~sl~~~~ 206 (211)
..++..+
T Consensus 267 ~~vv~t~ 273 (326)
T 3s5j_B 267 EAVVVTN 273 (326)
T ss_dssp SEEEEET
T ss_pred CEEEEec
Confidence 7776544
No 2
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=100.00 E-value=7.1e-36 Score=257.45 Aligned_cols=186 Identities=18% Similarity=0.207 Sum_probs=142.2
Q ss_pred cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCC-CCCeeheeHHHHhcC
Q 028297 3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWW-AAGIMFQDITTLLLD 66 (211)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~-~~~i~~~d~~~l~~~ 66 (211)
.|||||+|||||||++.| +|+++|||+. ++||++|++|+++..| +++|+.+.+++++..
T Consensus 49 ~esvrg~dV~iiqs~~~p-----~nd~lmeLl~~idA~k~asA~rIt~ViPY~~YaRQDr~~~~~r~pisak~vA~ll~~ 123 (319)
T 3dah_A 49 QENVRGKDVFVLQSTCAP-----TNDNLMELMIMVDALKRASAGRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEI 123 (319)
T ss_dssp CSCCBTCEEEEECCCCSS-----HHHHHHHHHHHHHHHHHTTBSEEEEEESSCTTTTCCSCCTTCCCCCHHHHHHHHHHH
T ss_pred CCCcCCCeEEEEccCCCC-----CcHHHHHHHHHHHHHHHcCCcEEEEEccCccccccccccCCCCCCccHHHHHHHHHh
Confidence 489999999999999866 8999999843 7999999999999999 999999999999864
Q ss_pred HHHHH-H---------------------HHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297 67 HKAFK-D---------------------TVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG 122 (211)
Q Consensus 67 ~~~~~-~---------------------~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~ 122 (211)
.+..+ . ....+++++++. +.++|++|+.||+.+|..+|+.|++|+.+++|+++.++
T Consensus 124 ~G~d~vit~DlH~~qiqgfF~ipvd~l~a~p~l~~~i~~~~~~~~vVVspd~Ggv~~A~~lA~~L~~p~~~i~K~r~~~~ 203 (319)
T 3dah_A 124 AGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYPDLLVVSPDVGGVVRARALAKQLNCDLAIIDKRRPKAN 203 (319)
T ss_dssp HTCCEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHHTTCCTTEEEECCSSTTHHHHHHHHHHTTCEEEC---------
T ss_pred cCCCEEEEEECCChHHhhhcCCceEecccHHHHHHHHHHhCCCCcEEEEeCCCccHHHHHHHHHhCCCEEEEEEEeccCC
Confidence 32211 1 134455555543 45799999999999999999999999998888765433
Q ss_pred ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeE
Q 028297 123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLY 200 (211)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~ 200 (211)
... .+.+ .+. .+||+|+||||+++||+|+.++++.|+++||+.|+++++|+.++ +.++|++.++.
T Consensus 204 ~v~-----------~~~i-~g~-v~gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~tH~v~s~~a~~~l~~~~i~ 270 (319)
T 3dah_A 204 VAE-----------VMNI-IGE-VEGRTCVIMDDMVDTAGTLCKAAQVLKERGAKQVFAYATHPVLSGGAADRIAASALD 270 (319)
T ss_dssp ------------------------CCSEEEEEEEEESSCHHHHHHHHHHHHTTCSCEEEEEEEECCCTTHHHHHHTSSCS
T ss_pred ceE-----------EEEc-ccc-CCCCEEEEEecccCchHHHHHHHHHHHHcCCCEEEEEEEeecCChHHHHHHHhCCCC
Confidence 211 1222 244 48999999999999999999999999999999999999999876 88889877777
Q ss_pred EEEccc
Q 028297 201 ILVEPR 206 (211)
Q Consensus 201 sl~~~~ 206 (211)
.++..+
T Consensus 271 ~vv~t~ 276 (319)
T 3dah_A 271 ELVVTD 276 (319)
T ss_dssp EEEEES
T ss_pred EEEEec
Confidence 777554
No 3
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=99.98 E-value=7.8e-34 Score=241.86 Aligned_cols=186 Identities=16% Similarity=0.190 Sum_probs=146.0
Q ss_pred cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297 3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH 67 (211)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~ 67 (211)
.|||||+||||+||++.| |+++|||+. ++||++|++|+++..|+++++.+.+++++...
T Consensus 42 ~~~vrg~dv~iiqs~~~p------n~~lmell~~~~a~~~~~a~~i~~v~Py~~yaRqdr~~~~~~~i~ak~vA~ll~~~ 115 (284)
T 1u9y_A 42 VDEINDDEAVIINTQKNQ------NDAIVETILLCDALRDEGVKKITLVAPYLAYARQDKKFNPGEAISIRALAKIYSNI 115 (284)
T ss_dssp CSCCCSSEEEEECCCSSH------HHHHHHHHHHHHHHHTTTCCEEEEECSSCTTCSCSSCSSTTBCCHHHHHHHHHHHH
T ss_pred CCCCCCCEEEEEeCCCCC------cHHHHHHHHHHHHHHHcCCceEEEEecccccceeeccccCCCchHHHHHHHHHhhc
Confidence 489999999999999843 999999843 79999999999999899999999999998432
Q ss_pred ------------HHHH---------HHHHHHHHHHhhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCcee
Q 028297 68 ------------KAFK---------DTVDIFVDRYRDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVI 125 (211)
Q Consensus 68 ------------~~~~---------~~~~~la~~i~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~ 125 (211)
...+ ..+..+++++.+. +.++|++|+.||+++|..+|+.|++|+..++|+++.++.
T Consensus 116 ~d~vit~dlH~~~~~~~f~~p~d~l~a~~~La~~i~~~~~~~vVv~pd~Gg~~~a~~la~~l~~p~~~i~k~r~~~~~-- 193 (284)
T 1u9y_A 116 VDKLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKDKLNDPIVLAPDKGALEFAKTASKILNAEYDYLEKTRLSPTE-- 193 (284)
T ss_dssp CSEEEEESCSCGGGGGGCSSCEEEECCHHHHHHHHTTTCSSCEEEESSGGGHHHHHHHHHHHTCCEEEBC----------
T ss_pred cCEEEEecCCChHHHHHhCCchhHhhHHHHHHHHHHhcCCCcEEEEEcCChHHHHHHHHHHhCCCEEEEEEEEcCCCe--
Confidence 1100 1156667777643 567999999999999999999999999888776643220
Q ss_pred eeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEE
Q 028297 126 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILV 203 (211)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~ 203 (211)
..+.+ .+...+||+||||||++|||+|+.++++.|+++||++|+++++|+.++ +.++|++.++++++
T Consensus 194 ----------~~~~l-~g~~v~Gk~VlIVDDii~TG~Tl~~aa~~Lk~~Ga~~V~~~~~h~v~s~~a~~~l~~~~i~~vv 262 (284)
T 1u9y_A 194 ----------IQIAP-KTLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKKIIAACVHPVLIGDALNKLYSAGVEEVV 262 (284)
T ss_dssp ------------CCB-SSCCCTTCCEEEEEEECSSSHHHHHHHHHHHHTTCCSEEEEEEECCCCTTHHHHHHHHTCSEEE
T ss_pred ----------EEEEe-cCccCCCCEEEEEecccCchHHHHHHHHHHHHCCCcEEEEEEEeEecCcHHHHHHHhCCCCEEE
Confidence 01222 232359999999999999999999999999999999999999999876 78888876788877
Q ss_pred cccc
Q 028297 204 EPRL 207 (211)
Q Consensus 204 ~~~~ 207 (211)
..+.
T Consensus 263 ~t~t 266 (284)
T 1u9y_A 263 GTDT 266 (284)
T ss_dssp EETT
T ss_pred EeCC
Confidence 6654
No 4
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=99.98 E-value=1.4e-33 Score=243.64 Aligned_cols=187 Identities=20% Similarity=0.225 Sum_probs=147.8
Q ss_pred cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297 3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH 67 (211)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~ 67 (211)
.|||||+||||+||++.| +|+++|||+. ++||++|++|+++..++.+++.+.+++++...
T Consensus 51 ~e~vrg~dv~iiqs~~~~-----~nd~lmell~~~~a~~~~~a~~i~av~pY~~yaRqd~K~~~r~~i~a~~~a~ll~~~ 125 (317)
T 1dku_A 51 EESIRGCDCYIIQSTSDP-----VNEHIMELLIMVDALKRASAKTINIVIPYYGYARQDRKARSREPITAKLFANLLETA 125 (317)
T ss_dssp CSCCTTCEEEEECCCCSS-----HHHHHHHHHHHHHHHHHTTCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHHH
T ss_pred cCCCCCCEEEEEcCCCCC-----CcHHHHHHHHHHHHhhccCcceEEEEEEcchHhhhhhhhcCCCchHHHHHHHHHHHc
Confidence 489999999999999866 8999999843 79999999999998899999888888887643
Q ss_pred HHHH----------------------HHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297 68 KAFK----------------------DTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE 123 (211)
Q Consensus 68 ~~~~----------------------~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~ 123 (211)
+..+ .....+++++++. +..+|++|+.||+.+|..+|+.|++|+..++|++...+.
T Consensus 126 g~~~vit~dlH~~q~~~~f~~p~d~l~a~p~l~~~l~~r~~~~~vVv~pd~Gg~~~A~~la~~L~~p~~~l~k~r~~~~~ 205 (317)
T 1dku_A 126 GATRVIALDLHAPQIQGFFDIPIDHLMGVPILGEYFEGKNLEDIVIVSPDHGGVTRARKLADRLKAPIAIIDKRRPRPNV 205 (317)
T ss_dssp TCCEEEEESCSSGGGGGGCSSCEEEECSHHHHHHHHHTTTCCSEEEEESSGGGHHHHHHHHHHTTCCEEEEECC------
T ss_pred CCCEEEEeccCchhhhcccCCCceEEEehHHHHHHHHhhcCCCcEEEEeCcchHHHHHHHHHHhCCCEEEEEEEeccccc
Confidence 2111 1245566666553 456999999999999999999999999887776532221
Q ss_pred eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEE
Q 028297 124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYI 201 (211)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~s 201 (211)
...+.+. +. .+||+|||||||+|||+|+.+|++.|+++||++|+++++|+..+ +.++|++.++..
T Consensus 206 -----------~~~~~l~-~~-v~gk~VlLVDDiitTG~Tl~~aa~~Lk~~Ga~~V~~~~tH~v~~~~a~~~l~~~~i~~ 272 (317)
T 1dku_A 206 -----------AEVMNIV-GN-IEGKTAILIDDIIDTAGTITLAANALVENGAKEVYACCTHPVLSGPAVERINNSTIKE 272 (317)
T ss_dssp --------------CEEE-SC-CTTCEEEEECSEESSCHHHHHHHHHHHHTTCSEEEEECSEECCCTTHHHHHHTSSEEE
T ss_pred -----------eeEEEec-cc-CCCCEEEEEecccCCCHHHHHHHHHHHHcCCcEEEEEEECcccChHHHHHHhhCCCCE
Confidence 1123332 44 49999999999999999999999999999999999999999887 777887777877
Q ss_pred EEcccc
Q 028297 202 LVEPRL 207 (211)
Q Consensus 202 l~~~~~ 207 (211)
++..+-
T Consensus 273 vv~t~t 278 (317)
T 1dku_A 273 LVVTNS 278 (317)
T ss_dssp EEEETT
T ss_pred EEEeCC
Confidence 776543
No 5
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=99.98 E-value=2.3e-33 Score=238.75 Aligned_cols=182 Identities=16% Similarity=0.154 Sum_probs=148.6
Q ss_pred ccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCHH
Q 028297 4 EETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDHK 68 (211)
Q Consensus 4 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~~ 68 (211)
|| |+|||||||++.| +|+++|||+. ++||++|++|++...|+++|+.+.+++++...
T Consensus 43 e~--g~dV~iiqs~~~p-----~nd~lmeLl~~ida~k~~~A~~it~ViPY~~YaRQDr~~~~~e~isak~vA~ll~~~- 114 (286)
T 3lrt_A 43 ED--LTGHNIFIIGNTH-----SDAEVMEMILTLSAIQDYRTKSVNIIAPYYGYARQHQRYKNGEPISSQILTEIYSSY- 114 (286)
T ss_dssp SC--CTTSEEEEECCCC-----SHHHHHHHHHHHHHGGGSCCSEEEEEESSCTTTTCCSCSSTTCCCHHHHHHHHHHHT-
T ss_pred CC--CCcEEEEEeCCCC-----CcHHHHHHHHHHHHHHHcCCCEEEEEecCcccccCcccCCCCCcccHHHHHHHHHHH-
Confidence 56 9999999999866 8999999843 79999999999999999999999999988532
Q ss_pred HHH-H---------------------HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceee
Q 028297 69 AFK-D---------------------TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVIS 126 (211)
Q Consensus 69 ~~~-~---------------------~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~ 126 (211)
..+ . .+..+++++++.+.++|++|+.||+.+|..+|+.|++|+..++|+++.++..
T Consensus 115 ~d~vit~DlH~~~iq~ff~~pvd~l~~~~~la~~i~~~~~~vVV~pd~Gg~~~A~~lA~~L~~p~~~i~K~r~~~g~v-- 192 (286)
T 3lrt_A 115 SNSIATVDIHDEKTLSYSKVKFSDLHANDAIVRYYKNVDVDYVVSPDDGGLARVADISAKLGKKHFFIEKKRIDDRTV-- 192 (286)
T ss_dssp CSEEEEESCSCGGGGGGCSSEEEEECCHHHHHHHHTTSCCSEEEESSSSSHHHHHHHHHHHTCEEEEEEEEEETTEEE--
T ss_pred hCeEEEecCChHHHhhhcCCcEEEeecHHHHHHHHHhcCCCEEEEECCCccHHHHHHHHHhCCCeEEEeeeecCCCcE--
Confidence 111 1 1455566666556789999999999999999999999999888876433321
Q ss_pred eeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCCeEEEEc
Q 028297 127 EAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKPLYILVE 204 (211)
Q Consensus 127 ~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~l~sl~~ 204 (211)
.+....+. .+||+||||||+++||+|+.++++.|+++||++++++++|+.++ +.++| +.++.+++.
T Consensus 193 ----------~i~~~~~d-v~gk~vliVDDii~TG~Tl~~a~~~L~~~Ga~~v~~~~th~v~s~~a~~~l-~s~i~~vv~ 260 (286)
T 3lrt_A 193 ----------EMKVPNVD-VNGKKLLIVDDIISTGGTIAKSSGLLREKGASKIYVSAVHGLFVNGSENKI-LQNADEIHV 260 (286)
T ss_dssp ----------EEEESCCC-CTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECCCTTHHHHH-TTTCSEEEE
T ss_pred ----------EEeecccc-CCcCEEEEEeccccccHHHHHHHHHHHhCCCCEEEEEEEEeecCchHHHHH-HcCCCEEEE
Confidence 11111233 59999999999999999999999999999999999999999886 78899 778888776
Q ss_pred ccc
Q 028297 205 PRL 207 (211)
Q Consensus 205 ~~~ 207 (211)
-+-
T Consensus 261 Tnt 263 (286)
T 3lrt_A 261 TDT 263 (286)
T ss_dssp ESS
T ss_pred ecC
Confidence 543
No 6
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=99.97 E-value=1.2e-32 Score=242.64 Aligned_cols=196 Identities=15% Similarity=0.178 Sum_probs=134.9
Q ss_pred cccccceeeEEEeeecccCcccceeeeeeeeee---------------eeeecceeeeeecCCCCCCeeheeHHHHhcCH
Q 028297 3 SEETRGYRAFLKQSVWCLTSQYQVSFSFFFLFF---------------CFVFSSWSFFFFQIWWAAGIMFQDITTLLLDH 67 (211)
Q Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~~~~~~~~~i~~~d~~~l~~~~ 67 (211)
.|||||+|||||||++.| +|++||||+. ++||++|++|++. +++.+|+.+.+++++...
T Consensus 74 ~esvrg~dV~iiqs~~~~-----~nd~lmeLl~~idA~k~asA~rit~ViPY~~YaRQdr~-~~r~~i~ak~vA~lL~~a 147 (379)
T 2ji4_A 74 QESVRGKDVFIIQTVSKD-----VNTTIMELLIMVYACKTSCAKSIIGVIPYFPYSKQCKM-RKRGSIVSKLLASMMCKA 147 (379)
T ss_dssp CSCCTTCEEEEECCCCSC-----HHHHHHHHHHHHHHHHHTTCSEEEEECSSCSSCCC--------CCHHHHHHHHHHHT
T ss_pred CCCcCCCEEEEEeCCCCC-----ccHHHHHHHHHHHHHHhcCCceEEEEEeccCccccccc-cCCCcHHHHHHHHHHHHc
Confidence 489999999999999866 8999999843 7999999999995 568889999899887532
Q ss_pred HH------------HH----------HHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297 68 KA------------FK----------DTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP 121 (211)
Q Consensus 68 ~~------------~~----------~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~ 121 (211)
+. .+ .....+++++.+ .+.++|++|+.||+++|..+|+.|++|+.+++|++...
T Consensus 148 Gad~vit~DlHs~q~qgfF~ipvD~l~A~p~La~~I~~~~~~~~~~vVV~pd~GGv~~A~~lA~~L~~pl~ii~k~r~~~ 227 (379)
T 2ji4_A 148 GLTHLITMDLHQKEIQGFFNIPVDNLRASPFLLQYIQEEIPDYRNAVIVAKSPASAKRAQSFAERLRLGIAVIHGEAQDA 227 (379)
T ss_dssp TCCEEEEESCSSGGGGGGSSSCEEEECCHHHHHHHHHHHSTTGGGEEEEESSGGGHHHHHHHHHHTTCEEEEEC------
T ss_pred CCCEEEEecCCChhhccccCCceeeeccHHHHHHHHHHhcccCCCcEEEEEccchHHHHHHHHHHhCCCEEEEEEEeecc
Confidence 11 00 113334444433 24679999999999999999999999998887665321
Q ss_pred C----------ceeeeeeeeecCc----------eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 122 G----------EVISEAYVLEYGT----------DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 122 ~----------~~~~~~~~~~~~~----------~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
. ......+..+++. ..+.+ .+. .+||+||||||+++||+|+.++++.|++.||+.|.+
T Consensus 228 ~~e~~~gr~~~~~v~~~~~~~~g~~i~~~~~~~~~~~~l-~g~-v~Gk~viiVDDii~TG~Tl~~a~~~L~~~Ga~~v~~ 305 (379)
T 2ji4_A 228 ESDLVDGRHSPPMVRSVAAIHPSLEIPMLIPKEKPPITV-VGD-VGGRIAIIVDDIIDDVDSFLAAAETLKERGAYKIFV 305 (379)
T ss_dssp -----------------------------------CCCE-ESC-CTTSEEEEEEEEECSCHHHHHHHHHHHHTTCCEEEE
T ss_pred cccccccccCCcccccccccccccchhhhhhhccccccc-ccC-CCCCEEEEEecCCCchHHHHHHHHHHHhcCCCEEEE
Confidence 0 0000000000000 01111 133 599999999999999999999999999999999999
Q ss_pred EEEEeCch--hhcccCCCCeEEEEccc
Q 028297 182 ACVVGLPE--GQRRLDGKPLYILVEPR 206 (211)
Q Consensus 182 ~~~~~~~~--~~~~l~~~~l~sl~~~~ 206 (211)
+++|+.++ +.++|++.++..++..+
T Consensus 306 ~~tH~v~s~~a~~~l~~s~id~vvvTn 332 (379)
T 2ji4_A 306 MATHGLLSSDAPRRIEESAIDEVVVTN 332 (379)
T ss_dssp EEEEECCCTTHHHHHHHSSCCEEEEES
T ss_pred EEEeecCCcHHHHHHHhCCCCEEEEec
Confidence 99999776 78888766676666544
No 7
>2dy0_A APRT, adenine phosphoribosyltransferase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.25A {Escherichia coli K12}
Probab=99.97 E-value=2.8e-30 Score=207.83 Aligned_cols=165 Identities=51% Similarity=0.879 Sum_probs=145.2
Q ss_pred eeeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCC
Q 028297 43 SFFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPG 122 (211)
Q Consensus 43 ~~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~ 122 (211)
..+++++||.+++.|.|+.+++.+++..+.+++.+++++.+.++|+|+++|.||+++|..+|+.|++|+..+||+++.++
T Consensus 21 ~i~~~p~~~~~g~~~~d~~~~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~rk~~~~~~ 100 (190)
T 2dy0_A 21 SIKSIQDYPKPGILFRDVTSLLEDPKAYALSIDLLVERYKNAGITKVVGTEARGFLFGAPVALGLGVGFVPVRKPGKLPR 100 (190)
T ss_dssp HSEEETTCSSTTCCEEETHHHHHCHHHHHHHHHHHHHHHTTTTCCEEEEETTHHHHHHHHHHHHHTCEEEEEBSTTCCCS
T ss_pred HHhhCCCCCCCCeEEEeChhhhcCHHHHHHHHHHHHHHhccCCCCEEEEECcccHHHHHHHHHHHCCCEEEEEecCCCCc
Confidence 34568999999999999999999999999999999999977678999999999999999999999999988888777666
Q ss_pred ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCC
Q 028297 123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKP 198 (211)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~ 198 (211)
...+.+++.+++.+.+.+..+...+|++||||||++|||+|+.+|++.|+++||++|+++|++++.+ ++++|+ ++|
T Consensus 101 ~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLlVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~g~~ 180 (190)
T 2dy0_A 101 ETISETYDLEYGTDQLEIHVDAIKPGDKVLVVDDLLATGGTIEATVKLIRRLGGEVADAAFIINLFDLGGEQRLEKQGIT 180 (190)
T ss_dssp CEEEEEEEETTEEEEEEEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHHTTTCE
T ss_pred ccccceehhhcCceEEEEeccccCCcCEEEEEEccccchHHHHHHHHHHHHcCCEEEEEEEEEEccCcchHHHHhhCCCc
Confidence 6666666666666667765444469999999999999999999999999999999999999999975 788886 899
Q ss_pred eEEEEcccc
Q 028297 199 LYILVEPRL 207 (211)
Q Consensus 199 l~sl~~~~~ 207 (211)
+++|+++++
T Consensus 181 v~sl~~~~~ 189 (190)
T 2dy0_A 181 SYSLVPFPG 189 (190)
T ss_dssp EEEEEEECC
T ss_pred EEEEEEecC
Confidence 999999875
No 8
>1zn8_A APRT, adenine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: AMP; 1.76A {Homo sapiens} SCOP: c.61.1.1 PDB: 1ore_A* 1zn7_A* 1zn9_A*
Probab=99.97 E-value=7.5e-30 Score=203.39 Aligned_cols=163 Identities=39% Similarity=0.740 Sum_probs=143.1
Q ss_pred eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcC---CcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC
Q 028297 44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMG---ISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL 120 (211)
Q Consensus 44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~---~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~ 120 (211)
.+++++||.+++.|.|+..++.+++..+.+++.+++.+...+ +|+|++++.||+++|..+|+.|++|+..+|++++.
T Consensus 13 i~~~~~~p~~g~~~~d~~~~l~~~~~~~~la~~l~~~~~~~~~~~~d~vv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~ 92 (180)
T 1zn8_A 13 IRSFPDFPTPGVVFRDISPVLKDPASFRAAIGLLARHLKATHGGRIDYIAGLDSRGFLFGPSLAQELGLGCVLIRKRGKL 92 (180)
T ss_dssp CEEEETCSSTTCEEEECHHHHHSHHHHHHHHHHHHHHHHHHHTTCCCEEEEETTTHHHHHHHHHHHHTCEEEEEEETTCC
T ss_pred HhcCCCCCcCCeEEEecHHHhcCHHHHHHHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHhCCCEEEEEecCCC
Confidence 456899999999999999999999999999999999886543 89999999999999999999999999888877666
Q ss_pred CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCCC
Q 028297 121 PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGKP 198 (211)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~~ 198 (211)
++...+..++.+++.+.+.+..+...+||+||||||++|||+|+.+|++.|+++|+++|++++++++++ +.++++++|
T Consensus 93 ~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~~~~~l~~~~ 172 (180)
T 1zn8_A 93 PGPTLWASYSLEYGKAELEIQKDALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLECVSLVELTSLKGREKLAPVP 172 (180)
T ss_dssp CSSEEEEEEEETTEEEEEEEETTSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEEEGGGCHHHHHTTSC
T ss_pred CcccccHHHHHhcCccEEEEeccccCCCCEEEEEcCCcccHHHHHHHHHHHHHcCCEEEEEEEEEEccCcchhhhhcCCc
Confidence 666666666666666677765454468999999999999999999999999999999999999999986 788999999
Q ss_pred eEEEEccc
Q 028297 199 LYILVEPR 206 (211)
Q Consensus 199 l~sl~~~~ 206 (211)
+++|++++
T Consensus 173 ~~sl~~~~ 180 (180)
T 1zn8_A 173 FFSLLQYE 180 (180)
T ss_dssp EEEEEEEC
T ss_pred eEEEEecC
Confidence 99999874
No 9
>1g2q_A Adenine phosphoribosyltransferase 1; dimer, single domain, catalytic loop; 1.50A {Saccharomyces cerevisiae} SCOP: c.61.1.1 PDB: 1g2p_A
Probab=99.97 E-value=1.1e-29 Score=203.76 Aligned_cols=164 Identities=35% Similarity=0.694 Sum_probs=141.1
Q ss_pred eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCC
Q 028297 44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNK 119 (211)
Q Consensus 44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~ 119 (211)
.+.+++||.+++.|.|+..++.+++..+.+++.+++++.+ .++|+|++++.||+++|..+|+.+++|+..++|.++
T Consensus 14 ~~~~~~~p~~g~~~~d~~~~l~~~~~~~~~~~~La~~i~~~~~~~~~d~Iv~v~~~G~~~a~~la~~l~~p~~~~rk~~~ 93 (187)
T 1g2q_A 14 LHQYPNFPSEGILFEDFLPIFRNPGLFQKLIDAFKLHLEEAFPEVKIDYIVGLESRGFLFGPTLALALGVGFVPVRKAGK 93 (187)
T ss_dssp CEEETTCSSTTCCEEECHHHHHSHHHHHHHHHHHHHHHHHHCTTSCCCEEEEETTTHHHHHHHHHHHHTCEEEEEEETTC
T ss_pred cccCCCCCCCCEEEEehHhhhcCHHHHHHHHHHHHHHHhhhcccCCCCEEEEEccCcHHHHHHHHHHHCCCEEEEEEeCC
Confidence 3568999999999999999999999999999999999976 468999999999999999999999999988887766
Q ss_pred CCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccCCC
Q 028297 120 LPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLDGK 197 (211)
Q Consensus 120 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~~~ 197 (211)
.++...+.+++.+++.+.+.+..+...+|++||||||++|||+|+.+|++.|+++|+++|++++++++.+ +++++ ++
T Consensus 94 ~~~~~~~~~~r~~~~~~~~~~~~~~~~~gk~VLlVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~~g~~~l-~~ 172 (187)
T 1g2q_A 94 LPGECFKATYEKEYGSDLFEIQKNAIPAGSNVIIVDDIIATGGSAAAAGELVEQLEANLLEYNFVMELDFLKGRSKL-NA 172 (187)
T ss_dssp SCSSEEEEEEECSSCEEEEEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCSSCCCCC-SS
T ss_pred CCcceecHHHHHHhCCCcEEEecccCCCcCEEEEECCCcccHHHHHHHHHHHHHcCCeEEEEEEEEEccCcCchhhc-Cc
Confidence 6666666666666666677765555569999999999999999999999999999999999999999986 78888 99
Q ss_pred CeEEEEccccc
Q 028297 198 PLYILVEPRLS 208 (211)
Q Consensus 198 ~l~sl~~~~~~ 208 (211)
|++||+++++.
T Consensus 173 ~~~sl~~~~~~ 183 (187)
T 1g2q_A 173 PVFTLLNAQKE 183 (187)
T ss_dssp CEEECC-----
T ss_pred cEEEEEEechh
Confidence 99999999875
No 10
>1qb7_A APRT, adenine phosphoribosyltransferase; dinucleotide binding fold; HET: ADE CIT; 1.50A {Leishmania donovani} SCOP: c.61.1.1 PDB: 1qb8_A* 1qcc_A* 1qcd_A 1mzv_A*
Probab=99.97 E-value=2.8e-29 Score=208.53 Aligned_cols=164 Identities=31% Similarity=0.580 Sum_probs=144.0
Q ss_pred ee-cCCCCCCe-eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC
Q 028297 46 FF-QIWWAAGI-MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP 121 (211)
Q Consensus 46 ~~-~~~~~~~i-~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~ 121 (211)
++ ++||.+++ .|.|++.++.++...+.+++.+++++.+. ++|+|++++.||+++|..+|..|++|+..+||.++.+
T Consensus 28 ~~~~dfp~~gip~~~D~~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~gG~~~a~~lA~~L~~p~~~~rk~~k~~ 107 (236)
T 1qb7_A 28 WYSPVFSPRNVPRFADVSSITESPETLKAIRDFLVQRYRAMSPAPTHILGFDARGFLFGPMIAVELEIPFVLMRKADKNA 107 (236)
T ss_dssp EECGGGSSSCSSSEECTHHHHTCHHHHHHHHHHHHHHHHHCSSCCSEEEEETTGGGGTHHHHHHHHTCCEEEEBCGGGCC
T ss_pred ccCCCCCCCCCEeEEEhHhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEECcCcHHHHHHHHHHhCCCEEEEEEecCCC
Confidence 56 99999999 99999999999999999999999999876 7899999999999999999999999998888877666
Q ss_pred Ccee-eeeeeeec---CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC
Q 028297 122 GEVI-SEAYVLEY---GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD 195 (211)
Q Consensus 122 ~~~~-~~~~~~~~---~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~ 195 (211)
+... +.++..++ +.+.+++..+.+.+|++||||||++|||+|+.++++.|+++||+++++++++++.+ |+++|.
T Consensus 108 ~~~~~s~~~~~~~~~~~~~~~~i~~~~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~g~~~l~ 187 (236)
T 1qb7_A 108 GLLIRSEPYEKEYKEAAPEVMTIRYGSIGKGSRVVLIDDVLATGGTALSGLQLVEASDAVVVEMVSILSIPFLKAAEKIH 187 (236)
T ss_dssp SSEEECCCCCCCTTSCCCCCCEEETTSSCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECGGGCHHHHHH
T ss_pred CcceeceeccchhhhcCcceEEEecCCCCCcCEEEEEecccccHHHHHHHHHHHHHcCCeEEEEEEEEEcccccHHHHHh
Confidence 6554 44455555 44566665555569999999999999999999999999999999999999999986 788886
Q ss_pred --------CCCeEEEEcccccc
Q 028297 196 --------GKPLYILVEPRLSV 209 (211)
Q Consensus 196 --------~~~l~sl~~~~~~~ 209 (211)
|+|++||++++++.
T Consensus 188 ~~~~~~~~g~~v~sl~~~~~~~ 209 (236)
T 1qb7_A 188 STANSRYKDIKFISLLSDDALT 209 (236)
T ss_dssp HHHHHTTTTCCEEEEEEGGGCC
T ss_pred hhcccccCCCcEEEEEEccccc
Confidence 89999999999864
No 11
>1l1q_A Adenine phosphoribosyltransferase; aprtase, giardia lamblia, purine metabolism, cataly transferase; HET: 9DA; 1.85A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1l1r_A*
Probab=99.96 E-value=3.1e-28 Score=195.30 Aligned_cols=164 Identities=30% Similarity=0.503 Sum_probs=140.4
Q ss_pred eeeecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCc
Q 028297 44 FFFFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGE 123 (211)
Q Consensus 44 ~~~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~ 123 (211)
.+.+|+||.+++.|.|+..++.++...+.+++.+++.+...++|+|+++|.||+++|..+|+.|++|+...+|+++.++.
T Consensus 12 ~~~~p~~p~~g~~~~d~~~~l~~~~~~~~l~~~la~~~~~~~~d~Iv~vp~rG~~~A~~la~~l~~p~~~~rk~~~~~~~ 91 (186)
T 1l1q_A 12 IKTIPDFPTKGIAFKDLSDILSTPAALDAVRKEVTAHYKDVPITKVVGIESRGFILGGIVANSLGVGFVALRKAGKLPGD 91 (186)
T ss_dssp CEEETTCSSTTCCEEECHHHHTCHHHHHHHHHHHHHHTTTSCCCEEEEESGGGHHHHHHHHHHHTCEEEEEEETTSSCSS
T ss_pred hccCCCCCCCCeEEEEhHHHhCCHHHHHHHHHHHHHHhhccCCCEEEEcCcccHHHHHHHHHHhCCCEEEEEecCCCCCc
Confidence 45689999999999999999999999999999999988766789999999999999999999999999888877766655
Q ss_pred eeeeeeeeecCce-eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCe--EEEEEEEEeCch--hhcccCCCC
Q 028297 124 VISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAE--VVECACVVGLPE--GQRRLDGKP 198 (211)
Q Consensus 124 ~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~--~V~v~~~~~~~~--~~~~l~~~~ 198 (211)
..+.+++..++.. .+.+..+...+|++||||||++|||+|+.+|++.|+++||+ +|+++|++++++ |+++|.+++
T Consensus 92 ~~~~~~~~~~~~~~~~~v~~~~~~~gk~VLLVDDVitTG~Tl~aa~~~L~~~Ga~~~~V~~~~l~~k~~~~g~~~l~~~~ 171 (186)
T 1l1q_A 92 VCKCTFDMEYQKGVTIEVQKRQLGPHDVVLLHDDVLATGGTLLAAIELCETAGVKPENIYINVLYEIEALKGREKVGQKC 171 (186)
T ss_dssp EEEEEEEETTEEEEEEEEEGGGCCTTCCEEEEEEEESSSHHHHHHHHHHHHTTCCGGGEEEEEEEECGGGCHHHHHTTTC
T ss_pred eechhhhhhcCcceEEEEecccCCCcCEEEEEecccccHHHHHHHHHHHHHcCCCcceEEEEEEEEccCccHHHHHhhcC
Confidence 5444444433332 56655444459999999999999999999999999999999 999999999986 899999999
Q ss_pred eEEEEcccc
Q 028297 199 LYILVEPRL 207 (211)
Q Consensus 199 l~sl~~~~~ 207 (211)
+.+++.+.+
T Consensus 172 ~~~~~~~~~ 180 (186)
T 1l1q_A 172 TRLFSVIRE 180 (186)
T ss_dssp CCEEEEEEC
T ss_pred cceehhhhh
Confidence 988887654
No 12
>3m3h_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, structural genomics, infectious diseases; 1.75A {Bacillus anthracis} PDB: 3osc_A*
Probab=99.93 E-value=2.9e-26 Score=189.92 Aligned_cols=145 Identities=19% Similarity=0.293 Sum_probs=118.9
Q ss_pred CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeee
Q 028297 53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYV 130 (211)
Q Consensus 53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~ 130 (211)
.+-.|.|.+.++.+|...+.+++.+++.+.+. ++|+|+|++.||+++|..+|..|++|+.++||+++.++...
T Consensus 54 ~Sp~Y~d~~~~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~a~~lA~~L~~p~~~vrk~~k~~G~~~----- 128 (234)
T 3m3h_A 54 KSPIYCDNRLTLSYPKVRQTIAAGLEELIKEHFPTVEVIAGTATAGIAHAAWVSDRMDLPMCYVRSKAKGHGKGN----- 128 (234)
T ss_dssp EESEEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEC---CHHHHHHHHHHHTCCEEEEC---------C-----
T ss_pred cCCEEEeCHHhccCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccchHHHHHHHHHHcCCCEEEEEEeeccCCcce-----
Confidence 33368999999999999999999999999876 78999999999999999999999999999888765443311
Q ss_pred eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEccc
Q 028297 131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPR 206 (211)
Q Consensus 131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~ 206 (211)
.+ .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +.++++ |+|+++|++++
T Consensus 129 ------~i---~g~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~~~~~~~~~e~l~~~gi~v~sL~~~~ 199 (234)
T 3m3h_A 129 ------QI---EGKAEKGQKVVVVEDLISTGGSAITCVEALREAGCEVLGIVSIFTYELEAGKEKLEAANVASYSLSDYS 199 (234)
T ss_dssp ------CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHTTCCEEESSCHH
T ss_pred ------EE---ecccCCCCEEEEEecccchhHHHHHHHHHHHHCCCEEEEEEEEEECcCchHHHHHHhcCCCEEEEeeHH
Confidence 22 245569999999999999999999999999999999999999999864 788884 89999999999
Q ss_pred ccccC
Q 028297 207 LSVNY 211 (211)
Q Consensus 207 ~~~~~ 211 (211)
++++|
T Consensus 200 dl~~~ 204 (234)
T 3m3h_A 200 ALTEV 204 (234)
T ss_dssp HHHHH
T ss_pred HHHHH
Confidence 98864
No 13
>3dez_A OPRT, oprtase, orotate phosphoribosyltransferase; glycosyltransferase, MAGN pyrimidine biosynthesis; 2.40A {Streptococcus mutans}
Probab=99.93 E-value=9.9e-26 Score=187.62 Aligned_cols=142 Identities=21% Similarity=0.320 Sum_probs=123.6
Q ss_pred eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297 56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY 133 (211)
Q Consensus 56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~ 133 (211)
.|.|++.++.+|...+.+++.+++.+.+. ++|+|++++.||+++|..+|..|++|+.++||+++.++...
T Consensus 69 ~Y~d~~~~l~~p~~~~~l~~~la~~i~~~~~~~DvIvg~~~gGi~~A~~lA~~L~~p~~~vrk~~k~~G~~~-------- 140 (243)
T 3dez_A 69 IYTDNRITLSYPETRTLIENGFVETIKEAFPEVEVIAGTATAGIPHGAIIADKMNLPLAYIRSKPKDHGAGN-------- 140 (243)
T ss_dssp EEECTTGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHTTCCEEEECSSCC-----C--------
T ss_pred EEEeCHHhccCHHHHHHHHHHHHHHHHhhCCCCCEEEEecCchHHHHHHHHHHcCCCEEEEEEeeccCCcee--------
Confidence 58899999999999999999999999876 78999999999999999999999999999988765444321
Q ss_pred CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297 134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV 209 (211)
Q Consensus 134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~ 209 (211)
.+ .+...+|++||||||++|||+|+.++++.|+++|++++++++++++.. +.++++ ++++++|+++++++
T Consensus 141 ---~i---eg~~~~Gk~VLIVDDvitTG~Tl~~a~~~L~~~Ga~vv~v~~l~d~~~~~a~e~l~~~gi~~~sL~~~~dl~ 214 (243)
T 3dez_A 141 ---QI---EGRVTKGQKMVIIEDLISTGGSVLDAVAAAQREGADVLGVVAIFTYELPKATANFEKASVKLVTLSNYSELI 214 (243)
T ss_dssp ---CE---ESCCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESSCHHHHH
T ss_pred ---EE---EeccCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCCchHHHHHHhcCCCEEEEeeHHHHH
Confidence 22 245569999999999999999999999999999999999999999863 788885 89999999999988
Q ss_pred cC
Q 028297 210 NY 211 (211)
Q Consensus 210 ~~ 211 (211)
+|
T Consensus 215 ~~ 216 (243)
T 3dez_A 215 KV 216 (243)
T ss_dssp HH
T ss_pred HH
Confidence 64
No 14
>2p1z_A Phosphoribosyltransferase; STRU genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; 2.44A {Corynebacterium diphtheriae}
Probab=99.92 E-value=1.1e-24 Score=173.91 Aligned_cols=143 Identities=24% Similarity=0.269 Sum_probs=116.6
Q ss_pred CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCCCCceeeeeee
Q 028297 53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYV 130 (211)
Q Consensus 53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~~~~~~~~~~~ 130 (211)
++..|.|+..++.+|+..+.+++.+++++.+.++|+|+++|.||+++|..+|+.+++|+ ..+|++.+..+.
T Consensus 31 ~s~~y~d~~~~~~~~~~~~~l~~~la~~i~~~~~d~vv~v~~gG~~~a~~la~~l~~~~~~~~~rk~~~~~g~------- 103 (180)
T 2p1z_A 31 EADYYVDLRRATLHARASRLIGELLRELTADWDYVAVGGLTLGADPVATSVMHADGREIHAFVVRKEAKKHGM------- 103 (180)
T ss_dssp ----CCCTHHHHTSHHHHHHHHHHHHHTTTTSCCSEEEEETTTHHHHHHHHHHSSSSCCEEEEECSCCC-CC--------
T ss_pred cCCEEEEChhhcCCHHHHHHHHHHHHHHHhhcCCCEEEEecCCCHHHHHHHHHHHCCCCCeEEEEeccccccc-------
Confidence 34468899999999999999999999998777889999999999999999999999775 445544321111
Q ss_pred eecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEcccc
Q 028297 131 LEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRL 207 (211)
Q Consensus 131 ~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~ 207 (211)
...+. +...+||+||||||++|||+|+.++++.|+++|++++++++++++++ ++++++ |+|++||+++++
T Consensus 104 ----~~~~~---g~~~~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~~~~~g~~~l~~~g~~~~sl~~~~~ 176 (180)
T 2p1z_A 104 ----QRRIE---GPDVVGKKVLVVEDTTTTGNSPLTAVKALREAGAEVVGVATVVDRATGAADVIAAEGLEYRYILGLED 176 (180)
T ss_dssp ----CCSEE---SSCCTTCEEEEEEEECSSSHHHHHHHHHHHHHTCEEEEEEEEEC-CCCHHHHHHTTTCCEEEEECSTT
T ss_pred ----hhhcc---CCCCCcCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcchHHHHHhcCCeEEEEEEHHH
Confidence 00121 34469999999999999999999999999999999999999999987 778884 899999999999
Q ss_pred cc
Q 028297 208 SV 209 (211)
Q Consensus 208 ~~ 209 (211)
++
T Consensus 177 l~ 178 (180)
T 2p1z_A 177 LG 178 (180)
T ss_dssp TT
T ss_pred hh
Confidence 84
No 15
>2yzk_A OPRT, oprtase, orotate phosphoribosyltransferase; rossmann fold, glycosyltransferase, magnesium, pyrimidine biosynthesis, structural genomics; 1.80A {Aeropyrum pernix}
Probab=99.92 E-value=4.6e-25 Score=175.70 Aligned_cols=141 Identities=22% Similarity=0.368 Sum_probs=120.3
Q ss_pred eheeHHHHhcCHHHHHHHHHHHHHHH-hhc-CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297 56 MFQDITTLLLDHKAFKDTVDIFVDRY-RDM-GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY 133 (211)
Q Consensus 56 ~~~d~~~l~~~~~~~~~~~~~la~~i-~~~-~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~ 133 (211)
.|.|+..++.+|+..+.+++.+++.+ ... ++|+|++++.||+++|..+|+.+++|+...|++++..+..
T Consensus 27 ~f~d~~~l~~~~~~~~~l~~~l~~~~~~~~~~~~~iv~v~~~G~~~a~~la~~l~~p~~~~r~~~~~~g~~--------- 97 (178)
T 2yzk_A 27 VYIDMRRLLGDESSYSVALDLLLEVGGQDLARSSAVIGVATGGLPWAAMLALRLSKPLGYVRPERKGHGTL--------- 97 (178)
T ss_dssp EEECGGGGTTCHHHHHHHHHHHHHHHHHHHHHCSEEEEETTTTHHHHHHHHHHHTCCEEEECCCCTTSCCC---------
T ss_pred eEEEChHhccCHHHHHHHHHHHHHHHhcccCCCCEEEEecccchHHHHHHHHHHCCCEEEEEccccccCcc---------
Confidence 47899999999999999999999988 654 6899999999999999999999999998877654321110
Q ss_pred CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297 134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN 210 (211)
Q Consensus 134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~ 210 (211)
..+ .+.+ +||+||||||++|||+|+.++++.|+++|++++.+++++++.. +.++|+ ++|+++|++++++++
T Consensus 98 --~~i---~~~~-~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~v~~~~l~~r~~~~~~~l~~~g~~~~sl~~~~~~~~ 171 (178)
T 2yzk_A 98 --SQV---EGDP-PKGRVVVVDDVATTGTSIAKSIEVLRSNGYTVGTALVLVDRGEGAGELLARMGVRLVSVATLKTILE 171 (178)
T ss_dssp --CCC---BTCC-CSSEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHH
T ss_pred --cee---cccC-CCCEEEEEEeccCCcHHHHHHHHHHHHcCCeEEEEEEEEEcCcCHHHHHHHcCCcEEEEeeHHHHHH
Confidence 011 2454 9999999999999999999999999999999999999999876 788885 899999999999876
Q ss_pred C
Q 028297 211 Y 211 (211)
Q Consensus 211 ~ 211 (211)
|
T Consensus 172 ~ 172 (178)
T 2yzk_A 172 K 172 (178)
T ss_dssp H
T ss_pred H
Confidence 4
No 16
>2wns_A Orotate phosphoribosyltransferase; alternative splicing, multifunctional enzyme, lyase, polymorphism, decarboxylase, phosphoprotein; HET: OMP; 1.90A {Homo sapiens}
Probab=99.92 E-value=6.7e-25 Score=178.51 Aligned_cols=142 Identities=20% Similarity=0.375 Sum_probs=121.3
Q ss_pred eheeHHHHhcCHHHHHHHHHHHHHHHhh--cCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297 56 MFQDITTLLLDHKAFKDTVDIFVDRYRD--MGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY 133 (211)
Q Consensus 56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~--~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~ 133 (211)
.|.|+..++.+|...+.+++.+++++.+ .++|+|+|+|.+|+++|..+|..|++|+...||..+..+..
T Consensus 31 ~y~d~~~l~~~~~~~~~l~~~la~~i~~~~~~~d~Iv~v~~~g~~~a~~la~~l~~p~~~~rk~~k~~g~~--------- 101 (205)
T 2wns_A 31 IYIDLRGIVSRPRLLSQVADILFQTAQNAGISFDTVCGVPYTALPLATVICSTNQIPMLIRRKETKDYGTK--------- 101 (205)
T ss_dssp EEECGGGGGGSHHHHHHHHHHHHHHHHHTTCCCSEEEECTTTTHHHHHHHHHHHTCCEEEECCTTTTSSSC---------
T ss_pred EEEeChHhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEcCCchHHHHHHHHHHHCcCEEEEecCcCccCcc---------
Confidence 5789999999999999999999999976 46899999999999999999999999998876654321110
Q ss_pred CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297 134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN 210 (211)
Q Consensus 134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~ 210 (211)
..+ .+.+.+||+||||||++|||+|+.+|++.|+++|++++++++++++.. +.++++ |+|+++|++++++.+
T Consensus 102 --~~~---~g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~~~~l~~~~~~~~~~l~~~g~~v~sl~~~~~~~~ 176 (205)
T 2wns_A 102 --RLV---EGTINPGETCLIIEDVVTSGSSVLETVEVLQKEGLKVTDAIVLLDREQGGKDKLQAHGIRLHSVCTLSKMLE 176 (205)
T ss_dssp --CSE---ESCCCTTCBEEEEEEEESSSHHHHHHHHHHHHTTCBCCEEEEEEECCSSHHHHHHTTTCEEEEEEEHHHHHH
T ss_pred --ccc---cCCCCCCCEEEEEEEeccccHHHHHHHHHHHHCCCEEEEEEEEEEcCcchHHHHHHcCCeEEEEEEHHHHHH
Confidence 122 245568999999999999999999999999999999999999999975 777874 899999999998876
Q ss_pred C
Q 028297 211 Y 211 (211)
Q Consensus 211 ~ 211 (211)
|
T Consensus 177 ~ 177 (205)
T 2wns_A 177 I 177 (205)
T ss_dssp H
T ss_pred H
Confidence 4
No 17
>1y0b_A Xanthine phosphoribosyltransferase; purine metabolism, STRU genomics, PSI, protein structure initative, midwest center structural genomics; HET: G4P; 1.80A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 2fxv_A*
Probab=99.92 E-value=4.4e-24 Score=172.23 Aligned_cols=147 Identities=20% Similarity=0.312 Sum_probs=118.6
Q ss_pred HhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCC--Cceeee-eeeeecC-ceeE
Q 028297 63 LLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLP--GEVISE-AYVLEYG-TDRL 138 (211)
Q Consensus 63 l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~--~~~~~~-~~~~~~~-~~~~ 138 (211)
+..++...+.+++.+++.+...++|+|+|+|.||+++|..+|+.|++|+..++|+++.+ +..... .+....+ ...+
T Consensus 31 ~~~~~~~~~~l~~~la~~~~~~~~d~Iv~v~~rG~~~a~~la~~l~~p~~~~rk~~~~~~~~~~~~~~~~~~~~~~~~~~ 110 (197)
T 1y0b_A 31 HQIDPLLMQRIGDEFASRFAKDGITKIVTIESSGIAPAVMTGLKLGVPVVFARKHKSLTLTDNLLTASVYSFTKQTESQI 110 (197)
T ss_dssp SEECHHHHHHHHHHHHHHTTTTTCCEEEEETTTTHHHHHHHHHHHTCCEEEEBSSCCSSCCSSEEEEEEEETTTTEEEEE
T ss_pred ccCCHHHHHHHHHHHHHHhhcCCCCEEEEEcccCHHHHHHHHHHhCCCEEEEEecCCCCCCCceEEEeeeccccCceEEE
Confidence 45789999999999999987667899999999999999999999999998877766544 232211 1111111 2345
Q ss_pred EEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297 139 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV 209 (211)
Q Consensus 139 ~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~ 209 (211)
.+..+...+||+||||||++|||+|+.+|++.|+++||++|+++|+++++. +.++|+ +.|+++|++++++.
T Consensus 111 ~v~~~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~~~~~l~~~~~~~~sl~~~~~i~ 185 (197)
T 1y0b_A 111 AVSGTHLSDQDHVLIIDDFLANGQAAHGLVSIVKQAGASIAGIGIVIEKSFQPGRDELVKLGYRVESLARIQSLE 185 (197)
T ss_dssp EEEGGGCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEEETTSTHHHHHHHTTCCEEEEEEEEECT
T ss_pred EEeccccCCcCEEEEEEcccccCHHHHHHHHHHHHCCCEEEEEEEEEEecccchhhhHHhcCCcEEEEEEEEEec
Confidence 554344458999999999999999999999999999999999999999974 888886 78999999998763
No 18
>3mjd_A Orotate phosphoribosyltransferase; IDP02311, csgid, structural genomics, center for structural genomics of infectious diseases; 1.90A {Francisella tularensis}
Probab=99.91 E-value=3.3e-24 Score=177.32 Aligned_cols=146 Identities=16% Similarity=0.205 Sum_probs=118.2
Q ss_pred CCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCC
Q 028297 51 WAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPG 122 (211)
Q Consensus 51 ~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~ 122 (211)
.+.+-.|.|.+ ++.+|...+.+++.+++.+.+. ++|+|++|+.||+++|..+|..| ++|+.++||+.+..+
T Consensus 46 G~~Sp~y~d~~-~~~~p~~~~~l~~~la~~i~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~~~g~~~p~~~~RK~~k~~g 124 (232)
T 3mjd_A 46 GRISPYFFNAG-LFNTGAQLATLADYYAQLIIKSDVKYDILFGPAYKGIPLVAAISTVLALKYNIDMPYAFDRKEAKDHG 124 (232)
T ss_dssp SCEEEEEECGG-GCCBHHHHHHHHHHHHHHHHHCCCCCSEEEECTTTHHHHHHHHHHHHHHHHCCCCBEEEECCC-----
T ss_pred CCccceEeccc-ccCCHHHHHHHHHHHHHHHHhcCCCCCEEEEecCCcHHHHHHHHHHHhhhcCCCCcEEEEEeecccCC
Confidence 33444678875 5689999999999999999875 68999999999999999999997 899998888765433
Q ss_pred ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hh--------cc
Q 028297 123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQ--------RR 193 (211)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~--------~~ 193 (211)
.. ..++ +...+|++||||||++|||+|+.+++++|+++||+++++++++++.+ ++ +.
T Consensus 125 ~~-----------~~i~---g~~~~Gk~VLIVDDVitTG~Tl~~a~~~L~~~Ga~vv~v~vlvdr~e~g~~~~~~a~~~~ 190 (232)
T 3mjd_A 125 EG-----------GVFV---GADMTNKKVLLIDDVMTAGTAFYESYNKLKIINAKIAGVVLSIDRQEKAKDSDISATKKI 190 (232)
T ss_dssp -------------CCEE---ESCCTTCEEEEECSCCSSSHHHHHHHHHHHTTTCEEEEEEEEEECCBCCTTSSSCHHHHH
T ss_pred CC-----------ceEe---ccCCCCCEEEEEEeeccccHHHHHHHHHHHHCCCEEEEEEEEEECCcCCccccchhHHHH
Confidence 21 1222 33459999999999999999999999999999999999999999986 44 44
Q ss_pred cC--CCCeEEEEcccccccC
Q 028297 194 LD--GKPLYILVEPRLSVNY 211 (211)
Q Consensus 194 l~--~~~l~sl~~~~~~~~~ 211 (211)
++ |+|++||++++++++|
T Consensus 191 ~~~~gv~v~sL~~~~~l~~~ 210 (232)
T 3mjd_A 191 SQDFNIPVLAVTNFESIFEY 210 (232)
T ss_dssp HHHHCCCEEEEEEHHHHHHH
T ss_pred HHHcCCcEEEEEeHHHHHHH
Confidence 43 9999999999998764
No 19
>1o57_A PUR operon repressor; purine operon repressor, helix-turn-helix domain, phosphoribosyltranseferases, domain recombination, DNA binding; HET: EPE P6G 2PE PG4 1PE; 2.20A {Bacillus subtilis} SCOP: a.4.5.40 c.61.1.1 PDB: 1p4a_A*
Probab=99.91 E-value=1.2e-23 Score=179.55 Aligned_cols=151 Identities=22% Similarity=0.354 Sum_probs=121.3
Q ss_pred heeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-CCceeeeeeeee--c
Q 028297 57 FQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL-PGEVISEAYVLE--Y 133 (211)
Q Consensus 57 ~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~-~~~~~~~~~~~~--~ 133 (211)
|.++..++.+|.+.+.+++.+++.+.+.++|+|+++|.||+++|..+|..|++|+..++|+++. ++.....++... .
T Consensus 102 f~~~~~ll~~p~l~~~la~~la~~~~~~~~d~Iv~V~~rG~~~A~~lA~~L~vp~v~~rk~~~~t~~~~~~~~~~~g~~~ 181 (291)
T 1o57_A 102 YVYLTDILGKPSVLSKVGKLFASVFAEREIDVVMTVATKGIPLAYAAASYLNVPVVIVRKDNKVTEGSTVSINYVSGSSN 181 (291)
T ss_dssp EECCTTTTTCHHHHHHHHHHHHHHTTTSCCSEEEEETTTTHHHHHHHHHHHTCCEEEEBCC-----CCEEEEEEECSSCC
T ss_pred eEEehhhhCCHHHHHHHHHHHHHHhhccCCCEEEEECCCCHHHHHHHHHHhCCCEEEEEEeccCCCCceeeeeeeccccc
Confidence 5567788899999999999999999876789999999999999999999999999888776543 333333333211 1
Q ss_pred CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEEEccccc
Q 028297 134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYILVEPRLS 208 (211)
Q Consensus 134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl~~~~~~ 208 (211)
....+.+......+|++||||||++|||+|+.+|++.|+++||+++++++++++..+.+++ +.|++||++++++
T Consensus 182 ~~~~~~l~~~~l~~Gk~VLIVDDViTTG~Tl~~a~~~L~~aGA~vV~v~vlvdr~~~~~~l-~~~~~SL~~~~~~ 255 (291)
T 1o57_A 182 RIQTMSLAKRSMKTGSNVLIIDDFMKAGGTINGMINLLDEFNANVAGIGVLVEAEGVDERL-VDEYMSLLTLSTI 255 (291)
T ss_dssp SEEEEEEEGGGSCTTCEEEEEEEEESSSHHHHHHHHHTGGGTCEEEEEEEEEEESSCTTSC-CSCCEEEEEEECC
T ss_pred ceeeEEEecccCCCcCEEEEEEEEcCcHHHHHHHHHHHHHCCCEEEEEEEEEEcCcccccc-CCceEEEEEEccc
Confidence 1235555544446999999999999999999999999999999999999999998765555 5799999999876
No 20
>1lh0_A OMP synthase; loop closure, monomer closure, orotate phosphoribosyltransferase; HET: ORO PRP; 2.00A {Salmonella typhimurium} SCOP: c.61.1.1 PDB: 1opr_A* 1sto_A* 1oro_A
Probab=99.91 E-value=5.9e-24 Score=173.87 Aligned_cols=143 Identities=17% Similarity=0.306 Sum_probs=119.1
Q ss_pred CCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCCce
Q 028297 53 AGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGEV 124 (211)
Q Consensus 53 ~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~~~ 124 (211)
.+-.|.| ..++.++...+.+++.+++++.+. ++|+|+|++.||+++|..+|..| ++|+...||+.+.++..
T Consensus 30 ~s~~y~d-~~ll~~~~~~~~~~~~la~~i~~~~~~~d~Ivgv~~~G~~~a~~lA~~L~~~~~~~~~~~~~rk~~~~~~~~ 108 (213)
T 1lh0_A 30 KSPYFFN-AGLFNTGRDLALLGRFYAEALVDSGIEFDLLFGPAYKGIPIATTTAVALAEHHDKDLPYCFNRKEAKDHGEG 108 (213)
T ss_dssp EEEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHCCCCSEEECCTTTHHHHHHHHHHHHHHHHCCCCBEEEECSSCCSSTTC
T ss_pred cccEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEcCCCcHHHHHHHHHHHHHhhCCCCCEEEEEeccCccCCC
Confidence 3345778 568888999999999999999764 68999999999999999999999 89998888765433221
Q ss_pred eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhccc---------
Q 028297 125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRL--------- 194 (211)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l--------- 194 (211)
..+. +...+| +||||||++|||+|+.++++.|+++|++++++++++++.+ |+++|
T Consensus 109 -----------~~~~---g~~~~g-~VliVDDvitTG~Tl~~a~~~l~~~Ga~~v~v~~l~dr~~~g~~~l~~~~~~~~~ 173 (213)
T 1lh0_A 109 -----------GSLV---GSALQG-RVMLVDDVITAGTAIRESMEIIQAHGATLAGVLISLDRQERGRGEISAIQEVERD 173 (213)
T ss_dssp -----------SSEE---ESCCCS-EEEEECSCCSSSCHHHHHHHHHHHTTCEEEEEEEEEECCBBCSSSSBHHHHHHHH
T ss_pred -----------Ccee---CCCCCC-CEEEEEecccchHHHHHHHHHHHHCCCeEEEEEEEEEcccCcccchhhHHHHHHH
Confidence 1222 233589 9999999999999999999999999999999999999987 66666
Q ss_pred CCCCeEEEEcccccccC
Q 028297 195 DGKPLYILVEPRLSVNY 211 (211)
Q Consensus 195 ~~~~l~sl~~~~~~~~~ 211 (211)
.|+|++||++++++++|
T Consensus 174 ~g~~v~sl~~~~~l~~~ 190 (213)
T 1lh0_A 174 YGCKVISIITLKDLIAY 190 (213)
T ss_dssp HCCEEEEEEEHHHHHHH
T ss_pred cCCCeEEEEEHHHHHHH
Confidence 48999999999988764
No 21
>1vch_A Phosphoribosyltransferase-related protein; structural genomics, riken structural genomics/proteomics initiative, RSGI; 1.94A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.91 E-value=6.7e-24 Score=168.00 Aligned_cols=157 Identities=17% Similarity=0.171 Sum_probs=121.5
Q ss_pred eeeeecCCCCC-CeeheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCC-
Q 028297 43 SFFFFQIWWAA-GIMFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKL- 120 (211)
Q Consensus 43 ~~~~~~~~~~~-~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~- 120 (211)
..+.+++||.+ ++ |.+..++..++...+.+++.+++++.. ++|+|++++.||+++|..+|+.|++|+...+|+++.
T Consensus 11 ~~~~~~~~~~~~g~-~i~~~k~~~~~~~~~~~~~~la~~~~~-~~d~Iv~v~~gg~~~a~~la~~l~~p~~~~rk~~~~~ 88 (175)
T 1vch_A 11 VTRHVPLIEPLPGR-RIPLVEFLGDPEFTRAAAEALRPLVPK-EAEILFTTETSPIPLTHVLAEALGLPYVVARRRRRPY 88 (175)
T ss_dssp EEEEECEEEEETTE-EEECCCCTTCHHHHHHHHHHHGGGSCT-TCCEEEEESSTHHHHHHHHHHHHTCCEEEEBSSCCTT
T ss_pred eeeEcCceEcCCCc-EEEeeeccCCHHHHHHHHHHHHHHhcc-CCCEEEEeCCcChHHHHHHHHHhCCCEEEEEecCCCC
Confidence 34457888876 55 588888899999999999999988865 689999999999999999999999999877766543
Q ss_pred -CCceeeeeeeeec-CceeEEEecCCc--CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCC
Q 028297 121 -PGEVISEAYVLEY-GTDRLEMHVGAI--EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDG 196 (211)
Q Consensus 121 -~~~~~~~~~~~~~-~~~~~~~~~~~~--~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~ 196 (211)
+..........++ ..+.+.+..+.. .+||+||||||++|||+|+.+|++.|+++||++|++++++++... +
T Consensus 89 ~~~~~~~~~~~~r~~~~~~~~~~~~~~~~v~gk~VllVDDvitTG~Tl~~~~~~L~~~Ga~~V~~~~l~~~~~~-----~ 163 (175)
T 1vch_A 89 MEDPIIQEVQTLTLGVGEVLWLDRRFAEKLLNQRVVLVSDVVASGETMRAMEKMVLRAGGHVVARLAVFRQGTP-----G 163 (175)
T ss_dssp CCSCEEEECCC------CEEEECHHHHHHHTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECSCC-----S
T ss_pred CCcceeeeeeccccCCceEEEEecccccccCCCEEEEEeccccchHHHHHHHHHHHHcCCeEEEEEEEEecCCC-----C
Confidence 2221111111111 123555432222 389999999999999999999999999999999999999998643 7
Q ss_pred CCeEEEEccc
Q 028297 197 KPLYILVEPR 206 (211)
Q Consensus 197 ~~l~sl~~~~ 206 (211)
.|+++|..++
T Consensus 164 ~~~~sl~~~~ 173 (175)
T 1vch_A 164 LAVDTVAELP 173 (175)
T ss_dssp SCCEEEEECC
T ss_pred cceEEEEeec
Confidence 8999999875
No 22
>2aee_A OPRT, oprtase, orotate phosphoribosyltransferase; structural genomics, PSI, structure initiative; 1.95A {Streptococcus pyogenes} SCOP: c.61.1.1
Probab=99.90 E-value=2.4e-23 Score=169.87 Aligned_cols=141 Identities=23% Similarity=0.351 Sum_probs=118.5
Q ss_pred eheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeec
Q 028297 56 MFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEY 133 (211)
Q Consensus 56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~ 133 (211)
.|.|.+.++.+|...+.+++.+++++.+. ++|+|+|++.||+++|..+|+.|++|+..++|+++.++..
T Consensus 37 ~~~D~~~l~~~~~~~~~~~~~la~~i~~~~~~~d~vv~v~~~g~~~a~~la~~l~~p~~~~rk~~~~~g~~--------- 107 (211)
T 2aee_A 37 IYTDNRVTLSYPKTRDLIENGFVETIKAHFPEVEVIAGTATAGIPHGAIIADKMTLPFAYIRSKPKDHGAG--------- 107 (211)
T ss_dssp EEECGGGGGGCHHHHHHHHHHHHHHHHHHCTTCCEEEEETTTTHHHHHHHHHHHTCCEEEECSSCC----C---------
T ss_pred eEEeChhhcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEeccCcHHHHHHHHHHhCCCEEEEEeecCCcCCc---------
Confidence 47889999999999999999999998754 6799999999999999999999999998888766433221
Q ss_pred CceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch--hhcccC--CCCeEEEEcccccc
Q 028297 134 GTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE--GQRRLD--GKPLYILVEPRLSV 209 (211)
Q Consensus 134 ~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~--~~~~l~--~~~l~sl~~~~~~~ 209 (211)
..+. +...+||+||||||++|||+|+.++++.|+++|+++++++++++++. +.++|+ ++|+.++++.+++.
T Consensus 108 --~~i~---g~~~~gk~VliVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~~~~~~~~~~~l~~~~~~~~~l~~~~~i~ 182 (211)
T 2aee_A 108 --NQIE---GRVLKGQKMVIIEDLISTGGSVLDAAAAASREGADVLGVVAIFTYELPKASQNFKEAGIKLITLSNYTELI 182 (211)
T ss_dssp --CSEE---SCCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCEEEEEEEEEECCCHHHHHHHHHHTCCEEESCCHHHHH
T ss_pred --ceec---CCCCCcCEEEEEeecccchHHHHHHHHHHHHCCCcEEEEEEEEecccccHHHHHHhCCCCEEEEeeHHHHH
Confidence 1222 44469999999999999999999999999999999999999999864 788885 78999999987654
Q ss_pred c
Q 028297 210 N 210 (211)
Q Consensus 210 ~ 210 (211)
+
T Consensus 183 ~ 183 (211)
T 2aee_A 183 A 183 (211)
T ss_dssp H
T ss_pred H
Confidence 3
No 23
>3n2l_A OPRT, oprtase, orotate phosphoribosyltransferase; pyrimidine ribonucleotide biosynthesis, infectious diseases; 2.10A {Vibrio cholerae}
Probab=99.90 E-value=2e-23 Score=172.96 Aligned_cols=144 Identities=19% Similarity=0.299 Sum_probs=116.1
Q ss_pred CCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh------CCCeEEeecCCCCCCc
Q 028297 52 AAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI------GAKFVPLRKPNKLPGE 123 (211)
Q Consensus 52 ~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L------~~p~~~~~k~~~~~~~ 123 (211)
+.+-.|.|. .++.+|...+.+++.+++.+.+. ++|+|++|+.||+++|..+|..| ++|+.++||+.+.++.
T Consensus 54 ~~Sp~y~d~-~ll~~p~~l~~l~~~la~~i~~~~~~~D~Vvg~~~gGi~~A~~lA~~L~~~~g~~vp~~~~RK~~k~~g~ 132 (238)
T 3n2l_A 54 RKSPYFFNA-GLFNTGRDLARLGRFYAAALVDSGIEFDVLFGPAYKGIPIATTTAVALADHHDVDTPYCFNRKEAKNHGE 132 (238)
T ss_dssp CEEEEEECG-GGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSCCCCBEEEECCC------
T ss_pred CcccEEEEC-CCCCCHHHHHHHHHHHHHHHHhhCCCCCEEEecccChHHHHHHHHHHHhHhhCCCccEEEEeeccCCCCC
Confidence 333468887 56789999999999999999764 68999999999999999999997 7899998887654432
Q ss_pred eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhc------cc--
Q 028297 124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR------RL-- 194 (211)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~------~l-- 194 (211)
. ..++ +...+| +||||||++|||+|+.+++++|+++|++++++++++++.+ |++ ++
T Consensus 133 ~-----------~~i~---G~~~~G-~VliVDDvitTG~T~~~a~~~l~~~Ga~vv~v~vlvdr~egG~~~l~a~~~~~~ 197 (238)
T 3n2l_A 133 G-----------GNLV---GSKLEG-RVMLVDDVITAGTAIRESMELIQANKADLAGVLVAIDRQEKGKGELSAIQEVER 197 (238)
T ss_dssp -------------CEE---ESCCCS-EEEEECSCCSSSHHHHHHHHHHHHTTCEEEEEEEEEECCCBCSSSSBHHHHHHH
T ss_pred C-----------ceEe---ccccCC-cEEEEeeeecccHHHHHHHHHHHHcCCEEEEEEEEEEcccCccchhhHHHHHHH
Confidence 1 1222 334589 9999999999999999999999999999999999999876 333 23
Q ss_pred -CCCCeEEEEcccccccC
Q 028297 195 -DGKPLYILVEPRLSVNY 211 (211)
Q Consensus 195 -~~~~l~sl~~~~~~~~~ 211 (211)
.|+|++||++++++++|
T Consensus 198 ~~Gv~v~SL~~~~~l~~~ 215 (238)
T 3n2l_A 198 DFGCAVISIVSLTDLITY 215 (238)
T ss_dssp HHCCEEEEEEEHHHHHHH
T ss_pred HcCCCEEEEEEHHHHHHH
Confidence 39999999999998764
No 24
>3qw4_B UMP synthase; N-terminal orotidine monophosphate decarboxylase domain C-TE orotate phosphoribosyltransferase domain, transferase, LYAS; HET: U5P; 3.00A {Leishmania donovani}
Probab=99.89 E-value=2.4e-23 Score=187.17 Aligned_cols=141 Identities=21% Similarity=0.320 Sum_probs=122.0
Q ss_pred eheeHHHHhcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCc
Q 028297 56 MFQDITTLLLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGT 135 (211)
Q Consensus 56 ~~~d~~~l~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~ 135 (211)
.|.|++.++.+|...+.+++.+++.+.+.++|+|++++.||+++|..+|..|++|+.++||+++..+..
T Consensus 287 ~y~D~~~l~~~p~~~~~l~~~la~~~~~~~~D~Ivg~~~gGi~~A~~lA~~L~~p~~~~rk~~k~~g~~----------- 355 (453)
T 3qw4_B 287 IYIDLRRLVTYPAIMRLVAREYAKVLRHYKFDRIAGLPYAALPIASAISNEMNVPLIYPRREAKIYGTK----------- 355 (453)
T ss_dssp EEECCGGGGGCHHHHHHHHHHHHHHHTTSCCSEEEECTTTTHHHHHHHHHHHCCCEEEESSCC-----------------
T ss_pred EEEechHhccCHHHHHHHHHHHHHHhccCCCCEEEeccCCcHHHHHHHHHHhCCCEEEEEeeccccCcC-----------
Confidence 589999999999999999999999998778999999999999999999999999999888766432210
Q ss_pred eeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhcccC--CCCeEEEEccccccc
Q 028297 136 DRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQRRLD--GKPLYILVEPRLSVN 210 (211)
Q Consensus 136 ~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~~l~--~~~l~sl~~~~~~~~ 210 (211)
..+ .+.+.+|++||||||++|||+|+.++++.|+++|++++++++++++.. ++++|+ |+|++||++++|+++
T Consensus 356 ~~i---~g~~~~G~~VliVDDvitTG~T~~~~~~~l~~~g~~vv~v~~lvdr~~~g~~~l~~~g~~v~sL~~~~dl~~ 430 (453)
T 3qw4_B 356 AAI---EGEYKKGDRVVIIDDLVSTGETKVEAIEKLRSAGLEVVSIVVLVDRDMGAKAFLNKLGYDFEAVVGLHQLLP 430 (453)
T ss_dssp -CE---ESCCCTTCEEEEEEEEECC-CCHHHHHHHHHTTTCEEEEEEEEEECSSSHHHHHHHTTCCEEEEEEHHHHHH
T ss_pred ceE---ecccCCCCEEEEEeeeechhHHHHHHHHHHHHcCCEEEEEEEEEECCcchHHHHHhcCCCEEEEeEHHHHHH
Confidence 112 245569999999999999999999999999999999999999999987 778884 999999999999875
No 25
>2ps1_A Orotate phosphoribosyltransferase 1; alpha beta, oprtase-OA-PRPP complex; HET: ORO PRP; 1.75A {Saccharomyces cerevisiae} PDB: 2pry_A* 2prz_A*
Probab=99.89 E-value=4.2e-23 Score=170.20 Aligned_cols=143 Identities=17% Similarity=0.267 Sum_probs=117.8
Q ss_pred CeeheeHHHHhcCHHHHHHHHHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHh---------CCCeEEeecCCCCCC
Q 028297 54 GIMFQDITTLLLDHKAFKDTVDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAI---------GAKFVPLRKPNKLPG 122 (211)
Q Consensus 54 ~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L---------~~p~~~~~k~~~~~~ 122 (211)
+..|.| ..++.++...+.+++.+++++.+. ++|+|++|+.+|+++|..+|..| ++|+...||.++.++
T Consensus 35 s~~y~d-~~ll~~~~~~~~l~~~la~~i~~~~~~~d~Vvg~~~~G~~~a~~lA~~L~~~~~~~~~~~p~~~~rk~~k~~g 113 (226)
T 2ps1_A 35 SPYFFN-LGLFNTGKLLSNLATAYAIAIIQSDLKFDVIFGPAYKGIPLAAIVCVKLAEIGGSKFQNIQYAFNRKEAKDHG 113 (226)
T ss_dssp EEEEEC-GGGCCBHHHHHHHHHHHHHHHHHHTCCCSEEEECTTTHHHHHHHHHHHHHHHSTTTTTTCEEEEEEEEEESST
T ss_pred CCEEEe-cCccCCHHHHHHHHHHHHHHHHHhCCCCCEEEEeccCCHHHHHHHHHHHHhhhccccCCCCEEEEechhhhcC
Confidence 335777 568889999999999999999764 68999999999999999999999 999888776543322
Q ss_pred ceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch-hhc----c----
Q 028297 123 EVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE-GQR----R---- 193 (211)
Q Consensus 123 ~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~-~~~----~---- 193 (211)
.+.+.. +...+|++||||||++|||+|+.++++.|+++|++++++++++++.+ +++ +
T Consensus 114 ------------~~~~~~--~~~i~Gk~VlIVDDvitTG~Tl~~a~~~L~~~Ga~~v~v~~l~dr~~~g~~~~~~~~~~~ 179 (226)
T 2ps1_A 114 ------------EGGIIV--GSALENKRILIIDDVMTAGTAINEAFEIISNAKGQVVGSIIALDRQEVVSTDDKEGLSAT 179 (226)
T ss_dssp ------------TCEEEE--ESCCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEEEEEEECCBBSCTTCSSCCBHH
T ss_pred ------------CCceEe--cCCCCcCEEEEEEecccChHHHHHHHHHHHHcCCeEEEEEEEEEccCcccccccccchHH
Confidence 223332 23349999999999999999999999999999999999999999987 443 2
Q ss_pred -----cCCCCeEEEEcccccccC
Q 028297 194 -----LDGKPLYILVEPRLSVNY 211 (211)
Q Consensus 194 -----l~~~~l~sl~~~~~~~~~ 211 (211)
..|+|++||++++++++|
T Consensus 180 ~~~~~~~g~~v~sl~~~~~l~~~ 202 (226)
T 2ps1_A 180 QTVSKKYGIPVLSIVSLIHIITY 202 (226)
T ss_dssp HHHHHHHTCCEEEEEEHHHHHHH
T ss_pred HHHHHhcCCeEEEEecHHHHHHH
Confidence 349999999999988764
No 26
>3hvu_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, 2-(N-morphol ethanesulfonic acid (MES), IDP01892; HET: MES; 1.95A {Bacillus anthracis str} PDB: 3h83_A* 3kb8_A*
Probab=99.80 E-value=3.5e-19 Score=144.59 Aligned_cols=137 Identities=16% Similarity=0.211 Sum_probs=106.0
Q ss_pred eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCC
Q 028297 46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKL 120 (211)
Q Consensus 46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~ 120 (211)
.-++||.++|...|+..++.+++..+...+.+++++.+. +.++|+||+.||+.+|..+|+.|++|+ ..+++++..
T Consensus 16 ~~~~f~~~~~~~~di~~~l~s~~~i~~~i~~LA~~I~~~~~~~~~vVVgi~~GG~~~a~~La~~L~~p~~~~~i~~~~Y~ 95 (204)
T 3hvu_A 16 ENLYFQSNAMMNQDIEKVLISEEQIQEKVLELGAIIAEDYKNTVPLAIGVLKGAMPFMADLLKRTDTYLEMDFMAVSSYG 95 (204)
T ss_dssp ---CCCCCCCGGGGEEEEEECHHHHHHHHHHHHHHHHHHTSSSCCEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECS
T ss_pred CCCCCCCchhhhhcCCcEeCCHHHHHHHHHHHHHHHHHHcCCCCCEEEEeCcchHHHHHHHHHHhCCCcceEEEEEEEec
Confidence 457899999988888888999999999999999988654 478999999999999999999999985 334432211
Q ss_pred CCceeeeeeeeecCceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 121 PGEVISEAYVLEYGTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 121 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
... ...+.+.+. .....+||+||||||+++||+|+.++++.|+++|++++.+++++++++++
T Consensus 96 ~~~---------~~~~~v~i~~~l~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~ 159 (204)
T 3hvu_A 96 HST---------VSTGEVKILKDLDTSVEGRDILIVEDIIDSGLTLSYLVDLFKYRKAKSVKIVTLLDKPTGR 159 (204)
T ss_dssp GGG---------TTSCCEEEEECCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHHTTCSEEEEEEEEECGGGC
T ss_pred CCC---------ccCCcEEEEcCCCccCCCCEEEEEeceeCchHHHHHHHHHHHHcCCCEEEEEEEEECCCCC
Confidence 100 001112221 12235899999999999999999999999999999999999999998643
No 27
>1vdm_A Purine phosphoribosyltransferase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.50A {Pyrococcus horikoshii} SCOP: c.61.1.1
Probab=99.79 E-value=6.7e-19 Score=136.14 Aligned_cols=118 Identities=16% Similarity=0.258 Sum_probs=88.5
Q ss_pred cCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCC-CCceeeeeeeeecCceeEEEec
Q 028297 65 LDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKL-PGEVISEAYVLEYGTDRLEMHV 142 (211)
Q Consensus 65 ~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~ 142 (211)
.+....+.+++.+++++.+.++|+|++++.||+++|..+|+.|++|+.. +++.... .+... ....+....
T Consensus 6 ~s~~~~~~~~~~la~~i~~~~~d~iv~v~~gg~~~a~~la~~l~~~~~~~~~~~~~~~~~~~~--------~~~~~~~~~ 77 (153)
T 1vdm_A 6 LTWWQVDRAIFALAEKLREYKPDVIIGVARGGLIPAVRLSHILGDIPLKVIDVKFYKGIDERG--------EKPVITIPI 77 (153)
T ss_dssp CCHHHHHHHHHHHHHHHHHHCCSEEEEETTTTHHHHHHHHHHTTSCCEEEEEEECCCC--CCC--------SSCEEEECC
T ss_pred CCHHHHHHHHHHHHHHHHccCCCEEEEECCcCHHHHHHHHHHhCCCceEEEEEEEecCCcccc--------cceeEeccC
Confidence 3455566677888888865578999999999999999999999999653 3322111 11100 001233322
Q ss_pred CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
....+||+||||||++|||+|+.++++.|+++|+++|++++++.++..
T Consensus 78 ~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~~ 125 (153)
T 1vdm_A 78 HGDLKDKRVVIVDDVSDTGKTLEVVIEEVKKLGAKEIKIACLAMKPWT 125 (153)
T ss_dssp CSCCBTCEEEEEEEEESSCHHHHHHHHHHHTTTBSEEEEEEEEECTTC
T ss_pred CcCCCCCEEEEEecccCChHHHHHHHHHHHHcCCCEEEEEEEEeCCCC
Confidence 334589999999999999999999999999999999999999998764
No 28
>1hgx_A HGXPRTASE, hypoxanthine-guanine-xanthine phosphoribosyltransferase; glycosyltransferase, purine salvage, transferase (glycosyltransferase); HET: 5GP; 1.90A {Tritrichomonas foetus} SCOP: c.61.1.1
Probab=99.79 E-value=8.2e-19 Score=139.87 Aligned_cols=129 Identities=12% Similarity=0.228 Sum_probs=94.9
Q ss_pred eeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeee
Q 028297 58 QDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLE 132 (211)
Q Consensus 58 ~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~ 132 (211)
.|+..++.+++..+..+..+++++.+. +.++|++++.||+++|..+|+.|++|+.. ++... .... . .
T Consensus 8 ~di~~~l~~~~~i~~~~~~la~~i~~~~~~~~~vvv~i~~gg~~~a~~la~~l~~p~~~~~~~~~~-y~~~-~------~ 79 (183)
T 1hgx_A 8 DDLERVLYNQDDIQKRIRELAAELTEFYEDKNPVMICVLTGAVFFYTDLLKHLDFQLEPDYIICSS-YSGT-K------S 79 (183)
T ss_dssp TTEEEEEECHHHHHHHHHHHHHHHHHHHTTTCCEEEEETTTTHHHHHHHHTTCCSCCEEEEEEEEC--------------
T ss_pred cCcceEEcCHHHHHHHHHHHHHHHHHHcCCCCcEEEEeCcChHHHHHHHHHHcCCCcceeEEEEEe-cCCc-c------c
Confidence 456667788888888889999888643 57999999999999999999999999754 22111 0100 0 0
Q ss_pred cCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhccc
Q 028297 133 YGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRL 194 (211)
Q Consensus 133 ~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l 194 (211)
.+...+........+||+||||||++|||+|+.++++.|+++|+++|.++++++++.+.+++
T Consensus 80 ~~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~v~~~~l~~~~~g~~~~ 141 (183)
T 1hgx_A 80 TGNLTISKDLKTNIEGRHVLVVEDIIDTGLTMYQLLNNLQMRKPASLKVCTLCDKDIGKKAY 141 (183)
T ss_dssp ---CEEEECCSSCCTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCSSCSS
T ss_pred ccceEEeecCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEecCcccccC
Confidence 01112221112235899999999999999999999999999999999999999887634444
No 29
>1fsg_A HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage; HET: PRP 9DG; 1.05A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1qk3_A* 1qk4_A* 1qk5_A* 1dbr_A
Probab=99.77 E-value=2.1e-18 Score=142.74 Aligned_cols=145 Identities=17% Similarity=0.088 Sum_probs=104.9
Q ss_pred eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEEee-cCCCCC
Q 028297 46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVPLR-KPNKLP 121 (211)
Q Consensus 46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~-k~~~~~ 121 (211)
...+||.+++.+.|+..++.+++..+...+.+++++.+. +.++|+|++.||+++|..+|+.|+.++...+ |..+.+
T Consensus 31 ~~~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vVvgi~~gG~~~a~~la~~L~~~~~~~~~k~~~~P 110 (233)
T 1fsg_A 31 NADDFLVPPHCKPYIDKILLPGGLVKDRVEKLAYDIHRTYFGEELHIICILKGSRGFFNLLIDYLATIQKYSGRESSVPP 110 (233)
T ss_dssp EGGGSCCCTTTTTTCCEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHCSSCCSSCS
T ss_pred ccccCccCCcchhhCcEEeeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEEccCCHHHHHHHHHHhCCcccccccccCCCC
Confidence 357788888888888888899999999999999888652 6799999999999999999999987322211 111111
Q ss_pred Cc--eee-eeeeeecCceeEEEecC--CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 122 GE--VIS-EAYVLEYGTDRLEMHVG--AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 122 ~~--~~~-~~~~~~~~~~~~~~~~~--~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
.. ... .+|+.+...+.+.+..+ ...+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus 111 ~~~~~i~~~~y~~~~~~~~~~~~~~~~~~~~Gk~VLIVDDii~TG~Tl~~a~~~L~~~ga~~V~vavl~~k~~~ 184 (233)
T 1fsg_A 111 FFEHYVRLKSYQNDNSTGQLTVLSDDLSIFRDKHVLIVEDIVDTGFTLTEFGERLKAVGPKSMRIATLVEKRTD 184 (233)
T ss_dssp CEEEEEEEEEEETTEEEEEEEEECSCGGGGTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECCT
T ss_pred cEEEEEEEEeccCccccccEEEecCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 00 000 01111111112233211 22589999999999999999999999999999999999999997764
No 30
>1z7g_A HGPRT, HGPRTASE, hypoxanthine-guanine phosphoribosyltransferase; flexibility, trans CIS peptide bond isomerization, nucleotide binding; 1.90A {Homo sapiens} SCOP: c.61.1.1 PDB: 1hmp_A* 1bzy_A 3gep_A* 3ggc_A* 3ggj_A* 1d6n_A* 2vfa_A*
Probab=99.75 E-value=2.5e-18 Score=140.78 Aligned_cols=135 Identities=13% Similarity=0.187 Sum_probs=101.9
Q ss_pred eecCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhh---cCCcEEEEecCCccchHHHHHHHhC---------CCe--
Q 028297 46 FFQIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRD---MGISVVAGIEARGFVFGPSIALAIG---------AKF-- 111 (211)
Q Consensus 46 ~~~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~---~~~d~Iv~i~~gG~~~A~~lA~~L~---------~p~-- 111 (211)
+..+||.+++.+.|+..++.+++.++...+.+++++.+ .+.++|++++.||+++|..+|+.|+ +|+
T Consensus 17 ~~~~f~~~~~~~~di~~il~~~~~~~~~~~~La~~i~~~~~~~~~vVvgi~~GG~~~a~~la~~L~~~~~i~~g~~~~~~ 96 (217)
T 1z7g_A 17 DLDLFCIPNHYAEDLERVFIPHGLIMDRTERLARDVMKEMGGHHIVALCVLKGGYKFFADLLDYIKALNRNSDRSIPMTV 96 (217)
T ss_dssp CGGGSCCCGGGTTTEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEECSSCCHHHHHHHHHHHHHHTTCSSCCCEEE
T ss_pred cccccccCcccccccceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECCCCHHHHHHHHHHhCCccccCCCceEeee
Confidence 45688888888888888889999999888899988864 3578999999999999999999998 564
Q ss_pred EEeecCCCCCCceeeeeeeeecCceeEEEec---CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCc
Q 028297 112 VPLRKPNKLPGEVISEAYVLEYGTDRLEMHV---GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 188 (211)
Q Consensus 112 ~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~ 188 (211)
..++..... +. ...+.+.+.. ....+||+||||||+++||+|+.++++.|+++|++++.++++++++
T Consensus 97 ~~i~~~~y~-~~---------~~~~~~~~~~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~L~~~g~~~v~~~~l~~k~ 166 (217)
T 1z7g_A 97 DFIRLKSYC-ND---------QSTGDIKVIGGDDLSTLTGKNVLIVEDIIDTGKTMQTLLSLVRQYNPKMVKVASLLVKR 166 (217)
T ss_dssp EEECBC--------------------CCBCCSSCGGGGTTSEEEEEEEECCCHHHHHHHHHHHHTTCCSEEEEEEEEEEC
T ss_pred eeEEEEEec-cc---------ccccceEEecCCCccccCCCEEEEEeceeCcHHHHHHHHHHHHhcCCCEEEEEEEEECc
Confidence 223321110 00 0001111111 1224899999999999999999999999999999999999999877
Q ss_pred hh
Q 028297 189 EG 190 (211)
Q Consensus 189 ~~ 190 (211)
++
T Consensus 167 ~~ 168 (217)
T 1z7g_A 167 TP 168 (217)
T ss_dssp C-
T ss_pred cc
Confidence 53
No 31
>2geb_A Hypoxanthine-guanine phosphoribosyltransferase; HGPRT, mutant, inhibitor design, selectivity; 1.70A {Thermoanaerobacter tengcongensis}
Probab=99.75 E-value=2.8e-17 Score=131.28 Aligned_cols=123 Identities=15% Similarity=0.167 Sum_probs=89.7
Q ss_pred HHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCe--EEeecCCCCCCceeeeeeeeecCce
Q 028297 62 TLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKF--VPLRKPNKLPGEVISEAYVLEYGTD 136 (211)
Q Consensus 62 ~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~--~~~~k~~~~~~~~~~~~~~~~~~~~ 136 (211)
.++.++...+.....+++++.+. ++++|++++.||+++|..+|+.|++|+ ..+++.+....... .++.
T Consensus 14 ~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~l~~p~~~~~i~~~~y~~~~~~-------~~~~ 86 (185)
T 2geb_A 14 EILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKS-------SGIV 86 (185)
T ss_dssp EEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEEEECSTTHHH-------HCCE
T ss_pred eEEeCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCcHHHHHHHHHHcCCCceeEEEEEEecCCCCcc-------CccE
Confidence 34566677777777788877643 579999999999999999999999987 33432211111000 0111
Q ss_pred eEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 137 RLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 137 ~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
.+........+||+||||||++|||+|+.++++.|+++|+++|.+++++++++++
T Consensus 87 ~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~ 141 (185)
T 2geb_A 87 KIIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR 141 (185)
T ss_dssp EEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred EEeccCCCCCCCCEEEEECCccCCHHHHHHHHHHHHhcCCCEEEEEEEEECCCcc
Confidence 1211112235899999999999999999999999999999999999999998654
No 32
>1pzm_A HGPRT, hypoxanthine-guanine phosphoribosyltransferase; HET: 5GP; 2.10A {Leishmania tarentolae} SCOP: c.61.1.1
Probab=99.74 E-value=1.2e-17 Score=136.22 Aligned_cols=125 Identities=13% Similarity=0.159 Sum_probs=85.6
Q ss_pred eHHHHhcCHHHHHHHHHHHHHHHhh---------cCCcEEEEecCCccchHHHHHHHh---CCCe--EEeecCCCCCCce
Q 028297 59 DITTLLLDHKAFKDTVDIFVDRYRD---------MGISVVAGIEARGFVFGPSIALAI---GAKF--VPLRKPNKLPGEV 124 (211)
Q Consensus 59 d~~~l~~~~~~~~~~~~~la~~i~~---------~~~d~Iv~i~~gG~~~A~~lA~~L---~~p~--~~~~k~~~~~~~~ 124 (211)
|+..++.++...+...+.+++++.+ .+.++|+|++.||+++|..+|+.| ++|+ ..+++.+...+..
T Consensus 22 di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~la~~L~~~~~p~~~~~i~~~~y~~~~~ 101 (211)
T 1pzm_A 22 MSARTLVTQEQVWAATAKCAKKIAADYKDFHLTADNPLYLLCVLKGSFIFTADLARFLADEGVPVKVEFICASSYGSGVE 101 (211)
T ss_dssp TEEEEEECHHHHHHHHHHHHHHHHHHHGGGTCBTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEBCC-------
T ss_pred ccceEEeCHHHHHHHHHHHHHHHHHhcccccccCCCCCEEEEEccchHHHHHHHHHHHhhcCCCceeeeEEeeeccCccc
Confidence 3334445555555556666666543 346899999999999999999999 9995 3344322111100
Q ss_pred eeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 125 ISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 125 ~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
. .+.-.+........+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus 102 ~-------~~~~~~~~~~~~~v~gk~VllVDDvi~TG~Tl~aa~~~L~~~Ga~~V~v~~l~~k~~~ 160 (211)
T 1pzm_A 102 T-------SGQVRMLLDVRDSVENRHIMLVEDIVDSAITLQYLMRFMLAKKPASLKTVVLLDKPSG 160 (211)
T ss_dssp -------------CCBCCSSCCTTCEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred c-------CCceEEeccCCCCCCCCEEEEECCccccHHHHHHHHHHHHhcCCCEEEEEEEEecCcc
Confidence 0 0000110011123589999999999999999999999999999999999999999864
No 33
>2jbh_A Phosphoribosyltransferase domain-containing prote; glycosyltransferase, purine salvage; HET: 5GP; 1.7A {Homo sapiens}
Probab=99.74 E-value=1.1e-17 Score=137.75 Aligned_cols=133 Identities=14% Similarity=0.245 Sum_probs=96.2
Q ss_pred cCCCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhC---------CCe--EE
Q 028297 48 QIWWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIG---------AKF--VP 113 (211)
Q Consensus 48 ~~~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~---------~p~--~~ 113 (211)
..|+.+++.+.++..++.++.........+++++.+. +.++|+|++.||+++|..+|+.|+ +|+ ..
T Consensus 27 ~~F~~~~~~~~di~~~l~~~~~i~~~~~~La~~i~~~~~~~~~vvv~i~~gG~~~a~~la~~L~~~~~~~~~~~p~~~~~ 106 (225)
T 2jbh_A 27 NLFTYPQHYYGDLEYVLIPHGIIVDRIERLAKDIMKDIGYSDIMVLCVLKGGYKFXADLVEHLKNISRNSDRFVSMKVDF 106 (225)
T ss_dssp GGSCCCGGGTTSEEEEEECHHHHHHHHHHHHHHHHHHHTTSCEEEEEEETTTHHHHHHHHHHHHHHHHHSSCCCCEEEEE
T ss_pred HHCccCccccccCceEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEEcCCCEehhHHHHHHhhhhccccccCCCceEEE
Confidence 3466666655666677778888888888888888652 578999999999999999999998 564 33
Q ss_pred eecCCCCCCceeeeeeeeecCceeEEEec--C-CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 114 LRKPNKLPGEVISEAYVLEYGTDRLEMHV--G-AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 114 ~~k~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
++..+. .+.. ..+.+.+.. . ...+||+||||||+++||+|+.++++.|+++|+++|.++++++++++
T Consensus 107 i~~~~y-~~~~---------~~~~~~~~~~~~~~~v~Gk~VllVDDii~TG~Tl~~a~~~L~~~ga~~V~va~l~~k~~~ 176 (225)
T 2jbh_A 107 IRLKSY-RNDQ---------SMGEMQIIGGDDLSTLAGKNVLIVEDVVGTGRTMKALLSNIEKYKPNMIKVASLLVKRTS 176 (225)
T ss_dssp EEEC--------------------CCEESSSCGGGGTTSEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEEECC-
T ss_pred EEEEec-cCcc---------ccccEEEecCCCccccCCCEEEEEccccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 433211 0100 001111111 1 22489999999999999999999999999999999999999987754
No 34
>3o7m_A Hypoxanthine phosphoribosyltransferase; hypoxanthine-guanine phosphoribosyltransferase, salvage of nucleosides and nucleotides; HET: GOL; 1.98A {Bacillus anthracis} SCOP: c.61.1.0
Probab=99.73 E-value=2.2e-17 Score=132.20 Aligned_cols=124 Identities=15% Similarity=0.216 Sum_probs=93.0
Q ss_pred eHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeec
Q 028297 59 DITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEY 133 (211)
Q Consensus 59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~ 133 (211)
|+..++.+++..+...+.+++++.+. +.++|+|++.||+.+|..+|+.|++|+.. ++..+......
T Consensus 7 di~~~l~~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~p~~i~~i~~~~Y~~~~~--------- 77 (186)
T 3o7m_A 7 EIKDTLISEEQLQEKVKELALQIERDFEGEEIVVIAVLKGSFVFAADLIRHIKNDVTIDFISASSYGNQTE--------- 77 (186)
T ss_dssp EEEEEEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTTHHHHHHHHTTCCSCEEEEEEEEEECC-------------
T ss_pred cccEEecCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhCCCCceEEEEEEEecCCCc---------
Confidence 45556778888888888888887653 47899999999999999999999998633 44322111000
Q ss_pred CceeEEEe--cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 134 GTDRLEMH--VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 134 ~~~~~~~~--~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
..+.+.+. .....+||+||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus 78 ~~~~v~i~~~~~~~~~gk~VliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~ 137 (186)
T 3o7m_A 78 TTGKVKLLKDIDVNITGKNVIVVEDIIDSGLTLHFLKDHFFMHKPKALKFCTLLDKPERR 137 (186)
T ss_dssp ---CEEEEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred ccCcEEEEecCCCCCCcCEEEEEcCeeCCcHHHHHHHHHHHhcCCcEEEEEEEEECCCCC
Confidence 01112222 12235899999999999999999999999999999999999999998643
No 35
>3ozf_A Hypoxanthine-guanine-xanthine phosphoribosyltrans; transferase-transferase inhibitor complex; HET: HPA; 1.94A {Plasmodium falciparum fcr-3} PDB: 3ozg_A* 1cjb_A*
Probab=99.73 E-value=4.7e-18 Score=141.63 Aligned_cols=142 Identities=14% Similarity=0.143 Sum_probs=101.7
Q ss_pred CCCCCeeheeHHHHhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce-
Q 028297 50 WWAAGIMFQDITTLLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV- 124 (211)
Q Consensus 50 ~~~~~i~~~d~~~l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~- 124 (211)
|..+.....|+..++.+++..+...+.|++++.+. +.++|+|++.||+.+|..+|+.|+.++.. +||..+.+...
T Consensus 49 f~~p~~~~~di~~vli~~~~I~~~i~~LA~~I~~~~~~~~~vVVgIl~gG~~fa~~La~~L~~~~v~~~rk~gklP~~v~ 128 (250)
T 3ozf_A 49 FMIPAHYKKYLTKVLVPNGVIKNRIEKLAYDIKKVYNNEEFHILCLLKGSRGFFTALLKHLSRIHNYSAVETSKPLFGEH 128 (250)
T ss_dssp SCCCGGGGGGEEEEEECHHHHHHHHHHHHHHHHHHHTTCCEEEEEEETTTHHHHHHHHHHHHHHHHHHCCTTCCCCEEEE
T ss_pred ccCchhhhccCeEEEECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcchHHHHHHHHHHhccccccccccccCCCceEE
Confidence 34344455677777888999998888999888643 46899999999999999999999843322 23333332211
Q ss_pred --eeeeeeeecCceeEEEecCC--cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 125 --ISEAYVLEYGTDRLEMHVGA--IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 125 --~~~~~~~~~~~~~~~~~~~~--~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
...+|+.+++.+.+++..+. ..+||+||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus 129 fI~~ssY~~~~s~g~v~i~~~~~~~~~gk~VlIVDDii~TG~Tl~~~~~~L~~~g~~~v~va~l~~k~~~r 199 (250)
T 3ozf_A 129 YVRVKSYCNDQSTGTLEIVSEDLSCLKGKHVLIVEDIIDTGKTLVKFCEYLKKFEIKTVAIACLFIKRTPL 199 (250)
T ss_dssp EEEEEEEETTEEEEEEEEECCCGGGGTTCEEEEEEEEESSSHHHHHHHHHHGGGCCSEEEEEEEEEECCTT
T ss_pred EEEEEEecCCcccCcEEEEcCCccccCCCEEEEEeceeCchHHHHHHHHHHHhcCCCEEEEEEEEECCccc
Confidence 11123222223344443222 24899999999999999999999999999999999999999998643
No 36
>1tc1_A Protein (hypoxanthine phosphoribosyltransferase); transferase,phosphoribosyltransferase, purine salvage, nucleotide metabolism; HET: FMB MES; 1.41A {Trypanosoma cruzi} SCOP: c.61.1.1 PDB: 1tc2_A* 1p19_A* 1p18_A* 1p17_A* 1i0l_A* 1i14_A* 1i0i_A* 1i13_A*
Probab=99.72 E-value=3.5e-17 Score=134.28 Aligned_cols=125 Identities=15% Similarity=0.182 Sum_probs=88.7
Q ss_pred eHHHHhcCHHHHHHHHHHHHHHHhhc---CC-------cEEEEecCCccchHHHHHHHh---CCCeE--EeecCCCCCCc
Q 028297 59 DITTLLLDHKAFKDTVDIFVDRYRDM---GI-------SVVAGIEARGFVFGPSIALAI---GAKFV--PLRKPNKLPGE 123 (211)
Q Consensus 59 d~~~l~~~~~~~~~~~~~la~~i~~~---~~-------d~Iv~i~~gG~~~A~~lA~~L---~~p~~--~~~k~~~~~~~ 123 (211)
|+..++.+++......+.|+.++.+. .. ++|+|++.||+++|..+|+.| ++|+. .+++.+...+.
T Consensus 6 di~~~li~~~~i~~~~~~La~~I~~~~~~~~~~~~~p~~vVv~v~~gG~~~a~~La~~L~~~~~p~~~~~l~~~~y~~~~ 85 (220)
T 1tc1_A 6 FAEKILFTEEEIRTRIKEVAKRIADDYKGKGLRPYVNPLVLISVLKGSFMFTADLCRALCDFNVPVRMEFICVSSYGEGL 85 (220)
T ss_dssp TSCCEEECHHHHHHHHHHHHHHHHHHHTTSCCBTTTBCEEEEEETTTTHHHHHHHHHHHHHTTCCEEEEEEEEECC----
T ss_pred ccccEeeCHHHHHHHHHHHHHHHHHHccCcccccCCCCeEEEEeccCCHHHHHHHHHHHHhcCCCccccEEEEeecCCCc
Confidence 44455667777777777777777532 23 899999999999999999999 99953 34322111110
Q ss_pred eeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 124 VISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 124 ~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
.. .+.-.+........+||+||||||++|||+|+.++++.|+++|+++|.++++++++++
T Consensus 86 ~~-------~~~v~~~~~~~~~v~Gk~VLLVDDii~TG~Tl~~a~~~L~~~Ga~~V~v~~l~~k~~~ 145 (220)
T 1tc1_A 86 TS-------SGQVRMLLDTRHSIEGHHVLIVEDIVDTALTLNYLYHMYFTRRPASLKTVVLLDKREG 145 (220)
T ss_dssp ------------CEEEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECTTC
T ss_pred cc-------CCcEEEecCCCccCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCEEEEEEEEECCcc
Confidence 00 0011121111223589999999999999999999999999999999999999998864
No 37
>1wd5_A Hypothetical protein TT1426; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: MES; 2.00A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.72 E-value=4.4e-17 Score=132.36 Aligned_cols=133 Identities=25% Similarity=0.328 Sum_probs=87.4
Q ss_pred HHHHHHHHhhc--CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCce-------------
Q 028297 74 VDIFVDRYRDM--GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTD------------- 136 (211)
Q Consensus 74 ~~~la~~i~~~--~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~------------- 136 (211)
++.|++++.+. +.++|+++|+||+++|..+|+.|++|+.. ++|.+...+.........+.+..
T Consensus 10 ~~~La~~i~~~~~~~~vVv~v~rGg~~~A~~la~~l~~p~~~~~~rk~~~~~~~e~~~ga~s~~g~~~~~~~~~~~~~~~ 89 (208)
T 1wd5_A 10 GALLAEALAPLGLEAPVVLGLPRGGVVVADEVARRLGGELDVVLVRKVGAPGNPEFALGAVGEGGELVLMPYALRYADQS 89 (208)
T ss_dssp HHHHHHHHGGGCCCSCEEEECTTHHHHHHHHHHHHHTCEEEECCEEEEEETTEEEEEEEEEETTCCEEECTTHHHHSCHH
T ss_pred HHHHHHHHHhcCCCCCEEEEECCCCHHHHHHHHHHhCCCeEEEEEEEecCCCCchhhcceecCCCcEEechhhhcccCHH
Confidence 44455545432 56899999999999999999999999876 44432211000000000000000
Q ss_pred ------------------eEE-EecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCC
Q 028297 137 ------------------RLE-MHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGK 197 (211)
Q Consensus 137 ------------------~~~-~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~ 197 (211)
.+. .......+||+||||||++|||+|+.+|++.|+++|+++|.+++.+....+.++|...
T Consensus 90 ~l~~~~~~~~~~~~~r~~~~~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~ga~~V~v~~~v~~~~~~~~l~~~ 169 (208)
T 1wd5_A 90 YLEREAARQRDVLRKRAERYRRVRPKAARKGRDVVLVDDGVATGASMEAALSVVFQEGPRRVVVAVPVASPEAVERLKAR 169 (208)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHSCCCCCTTSEEEEECSCBSSCHHHHHHHHHHHTTCCSEEEEEEEEBCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHHHHHhhccCCCCCCCCCEEEEECCCccHHHHHHHHHHHHHHcCCCEEEEEEEEcCHHHHHHhccc
Confidence 000 0011225899999999999999999999999999999999999999888776766432
Q ss_pred -CeEEEEccc
Q 028297 198 -PLYILVEPR 206 (211)
Q Consensus 198 -~l~sl~~~~ 206 (211)
.+..+.+.+
T Consensus 170 ~~~v~~~~~~ 179 (208)
T 1wd5_A 170 AEVVALSVPQ 179 (208)
T ss_dssp SEEEEEECCT
T ss_pred CcEEEEecCc
Confidence 555555433
No 38
>1yfz_A Hypoxanthine-guanine phosphoribosyltransferase; protein-nucleotide complex; HET: IMP; 2.20A {Thermoanaerobacter tengcongensis} SCOP: c.61.1.1 PDB: 1r3u_A*
Probab=99.72 E-value=5.8e-17 Score=131.42 Aligned_cols=122 Identities=16% Similarity=0.174 Sum_probs=88.4
Q ss_pred HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCcee
Q 028297 63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR 137 (211)
Q Consensus 63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~ 137 (211)
++.++.........+++++.+. ++|+|++++.||+++|..+|+.|++|+. .+++.+....... .++..
T Consensus 35 ~l~~~~~i~~~~~~La~~i~~~~~~~~~viv~v~~gG~~~a~~la~~l~~p~~~~~~~~~~y~~~~~~-------~~~~~ 107 (205)
T 1yfz_A 35 ILITEEQLKAKVKELGEMITRDYEGKDLVLIGVLKGAIMFMSGLSRAIDLPLSIDFLAVSSYGSSTKS-------SGIVK 107 (205)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTSCEEEEEETTTHHHHHHHHHHTCCSCCEEEEEEEEECSHHHHH-------HCCEE
T ss_pred EEcCHHHHHHHHHHHHHHHHHHcCCCCCEEEEECcCCHHHHHHHHHHhCCCceeEEEEEEeccCCccc-------cceEE
Confidence 4556666677777777777642 5799999999999999999999999962 3332211100000 01111
Q ss_pred EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
+........+||+||||||++|||+|+.++++.|+++|+++|.+++++++++++
T Consensus 108 ~~~~~~~~~~gk~VllVDDvi~TG~Tl~~a~~~L~~~Ga~~V~~~~l~~~~~~~ 161 (205)
T 1yfz_A 108 IIKDHDIDIEGKDVLIVEDIIDSGLTLAYLRETLLGRKPRSLKICTILDKPERR 161 (205)
T ss_dssp EEECCCSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred EeccCCCCCCcCEEEEECCccCcHHHHHHHHHHHHhcCCCEEEEEEEEecCccc
Confidence 111112235899999999999999999999999999999999999999988654
No 39
>1a3c_A PYRR, pyrimidine operon regulatory protein PYRR; transcription regulation, attenuation protein, RNA-binding P pyrimidine biosynthesis; 1.60A {Bacillus subtilis} SCOP: c.61.1.1 PDB: 1a4x_A 2igb_A* 1xz8_A* 1non_A 1xzn_A*
Probab=99.71 E-value=3.6e-17 Score=129.90 Aligned_cols=122 Identities=16% Similarity=0.214 Sum_probs=83.3
Q ss_pred HhcCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhC----CC--eEEeecCCC-CCCceeeeeeee
Q 028297 63 LLLDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AK--FVPLRKPNK-LPGEVISEAYVL 131 (211)
Q Consensus 63 l~~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~----~p--~~~~~k~~~-~~~~~~~~~~~~ 131 (211)
++.++.........+++++.+. ++|+|++++.||+++|..+|+.|+ +| +..+++... ..........
T Consensus 6 ~l~~~~~i~~~~~~la~~i~~~~~~~~~~~iv~i~~~G~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~~~-- 83 (181)
T 1a3c_A 6 VILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAERIEQIEGNPVTVGEIDITLYRDDLSKKTSND-- 83 (181)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHCC----CEEEEESHHHHHHHHHHHHHHHHHHSSCCEEEEEEEECCC--------CC--
T ss_pred CccCHHHHHHHHHHHHHHHHHhcCCCCCeEEEEEcCCCHHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccCccc--
Confidence 4456677777777788777643 579999999999999999999987 44 333433211 1111100000
Q ss_pred ecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297 132 EYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 188 (211)
Q Consensus 132 ~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~ 188 (211)
......+.+ ....+||+||||||++|||+|+.+|++.|+++| +++|++++++++.
T Consensus 84 ~~~~~~~~~--~~~~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~k~ 139 (181)
T 1a3c_A 84 EPLVKGADI--PVDITDQKVILVDDVLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRG 139 (181)
T ss_dssp CCEEEEEEC--SSCCTTSEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred eeeeccccc--CcCCCCCEEEEEeCccCcHHHHHHHHHHHHhcCCCcEEEEEEEEccC
Confidence 000112222 223589999999999999999999999999997 9999999999886
No 40
>2ywu_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 2ywt_A* 2yws_A* 3acb_A 3acc_A* 3acd_A*
Probab=99.71 E-value=1.5e-16 Score=126.87 Aligned_cols=121 Identities=19% Similarity=0.174 Sum_probs=86.2
Q ss_pred hcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCceeE
Q 028297 64 LLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDRL 138 (211)
Q Consensus 64 ~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~~ 138 (211)
+.+++..+...+.+++++.+. +.++|+||+.||+.+|..+|+.|++|+. .++.......... .+.-.+
T Consensus 13 li~~~~i~~~i~~La~~I~~~~~~~~~vvVgi~~gg~~~a~~la~~L~~p~~~~~i~~~~y~~~~~~-------~~~v~i 85 (181)
T 2ywu_A 13 QISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYGNAFKS-------SGEVEL 85 (181)
T ss_dssp CBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------CE
T ss_pred EECHHHHHHHHHHHHHHHHHHcCCCCCEEEEECchhHHHHHHHHHHcCCCceEEEEEEEEecCCccc-------cCcEEE
Confidence 455666666677777777542 5789999999999999999999999864 3432211100000 001112
Q ss_pred EEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhh
Q 028297 139 EMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQ 191 (211)
Q Consensus 139 ~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~ 191 (211)
........+||+||||||+++||+|+.++++.|+++|++++.++++++++.++
T Consensus 86 ~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~k~~~~ 138 (181)
T 2ywu_A 86 LKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPSRR 138 (181)
T ss_dssp EECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGGGC
T ss_pred EecCCCCCCCCEEEEECCeeCChHHHHHHHHHHHhcCCcEEEEEEEEECCCCc
Confidence 21112235999999999999999999999999999999999999999998643
No 41
>3ohp_A Hypoxanthine phosphoribosyltransferase; structural genomics, PSI-2, protein structure initiative, NE SGX research center for structural genomics; 2.04A {Vibrio cholerae} SCOP: c.61.1.1 PDB: 1g9s_A* 1g9t_A* 1grv_A 1j7j_A
Probab=99.69 E-value=4.1e-16 Score=123.89 Aligned_cols=120 Identities=14% Similarity=0.203 Sum_probs=85.4
Q ss_pred hcCHHHHHHHHHHHHHHHhhc---CC-cEEEEecCCccchHHHHHHHhCCCeE--EeecCCCCCCceeeeeeeeecCcee
Q 028297 64 LLDHKAFKDTVDIFVDRYRDM---GI-SVVAGIEARGFVFGPSIALAIGAKFV--PLRKPNKLPGEVISEAYVLEYGTDR 137 (211)
Q Consensus 64 ~~~~~~~~~~~~~la~~i~~~---~~-d~Iv~i~~gG~~~A~~lA~~L~~p~~--~~~k~~~~~~~~~~~~~~~~~~~~~ 137 (211)
+.+++..+...+.++.++.+. .. ++|+|++.||+.+|..+|+.|++|+. .+++......... .+.-.
T Consensus 8 l~s~~~i~~~i~~La~~I~~~~~~~~~~vvVgi~~gG~~~a~~la~~L~~~~~~~~i~~~~y~~~~~~-------~~~v~ 80 (177)
T 3ohp_A 8 MISEQEVAQRIRELGQQITEHYQGSSDLVLVGLLRGSFVFMADLARQIHLTHQVDFMTASSYGNSMQS-------SRDVR 80 (177)
T ss_dssp EECHHHHHHHHHHHHHHHHHHTTTCSCEEEEEETTTTHHHHHHHHHTCCSCCEEEEEEECC---------------CCCC
T ss_pred eeCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECcchHHHHHHHHHHcCCCceEEEEEEEEEcCCCcc-------CCcEE
Confidence 345566666677777777543 24 89999999999999999999999863 3443221111000 01111
Q ss_pred EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
+........+||+||||||+++||+|+.++++.|++.|++++.++++++++.+
T Consensus 81 i~~~~~~~~~gk~vliVDDii~TG~Tl~~~~~~l~~~g~~~v~~~~l~~~~~~ 133 (177)
T 3ohp_A 81 ILKDLDDDIKGKDVLLVEDIIDTGNTLNKVKEILALREPKSIRICTLLDKPTR 133 (177)
T ss_dssp EEECCSSCCTTSEEEEEEEEESSCHHHHHHHHHHHTTCCSEEEEEEEEECGGG
T ss_pred EecCCCcccCCCEEEEEeeEeCcHHHHHHHHHHHHhcCCcEEEEEEEEECCcc
Confidence 22111223589999999999999999999999999999999999999999864
No 42
>1ufr_A TT1027, PYR mRNA-binding attenuation protein; pyrimidine nucleotide biosynthesis, transcriptional attenuation, RNA-binding protein; 2.60A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.67 E-value=3.6e-16 Score=124.19 Aligned_cols=119 Identities=17% Similarity=0.146 Sum_probs=80.3
Q ss_pred cCHHHHHHHHHHHHHHHhhc----CCcEEEEecCCccchHHHHHHHhC----CCeE--EeecCCCCCCceeeeeeeeecC
Q 028297 65 LDHKAFKDTVDIFVDRYRDM----GISVVAGIEARGFVFGPSIALAIG----AKFV--PLRKPNKLPGEVISEAYVLEYG 134 (211)
Q Consensus 65 ~~~~~~~~~~~~la~~i~~~----~~d~Iv~i~~gG~~~A~~lA~~L~----~p~~--~~~k~~~~~~~~~~~~~~~~~~ 134 (211)
.++.........++.++.+. +.++|+|++.||+++|..+|+.|+ +|+. .+++........... ....
T Consensus 8 ~~~~~i~~~~~~La~~i~~~~~~~~~~~iv~v~~rG~~~a~~la~~l~~~~~~~~~~~~l~~~~~~~~~~~~~---~~~~ 84 (181)
T 1ufr_A 8 MNAPEMRRALYRIAHEIVEANKGTEGLALVGIHTRGIPLAHRIARFIAEFEGKEVPVGVLDITLYRDDLTEIG---YRPQ 84 (181)
T ss_dssp EEHHHHHHHHHHHHHHHHHHHTSSTTEEEEEETTTHHHHHHHHHHHHHHHHCSCCCEEEEEEEC--------------CE
T ss_pred cCHHHHHHHHHHHHHHHHHHcCCCCCeEEEEECCCChHHHHHHHHHHhHHhCCCcccCeEEEEEecCcccccc---ccce
Confidence 34455555556666666432 457999999999999999999887 7763 233221110000000 0000
Q ss_pred ceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297 135 TDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 188 (211)
Q Consensus 135 ~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~ 188 (211)
...+.+ ... .+||+||||||++|||+|+.+|++.|+++| +++|.++++++++
T Consensus 85 ~~~~~~-~~~-~~gk~VllVDDvitTG~Tl~~a~~~L~~~G~a~~V~~~~l~~~~ 137 (181)
T 1ufr_A 85 VRETRI-PFD-LTGKAIVLVDDVLYTGRTARAALDALIDLGRPRRIYLAVLVDRG 137 (181)
T ss_dssp EEEEEE-CSC-CTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred eccccc-CcC-CCCCEEEEEecCCCcHHHHHHHHHHHHhcCCCcEEEEEEEEcCC
Confidence 112222 233 589999999999999999999999999999 9999999999886
No 43
>1nul_A XPRT, xanthine-guanine phosphoribosyltransferase; purine salvage enzym; 1.80A {Escherichia coli} SCOP: c.61.1.1 PDB: 1a96_A* 1a95_A 1a98_A 1a97_A*
Probab=99.66 E-value=3.4e-16 Score=121.31 Aligned_cols=111 Identities=21% Similarity=0.276 Sum_probs=82.8
Q ss_pred hcCHHHHHHHHHHHHHHHhh-cCCcEEEEecCCccchHHHHHHHhCCC-eEEeecCCCCCCceeeeeeeeecCceeEEEe
Q 028297 64 LLDHKAFKDTVDIFVDRYRD-MGISVVAGIEARGFVFGPSIALAIGAK-FVPLRKPNKLPGEVISEAYVLEYGTDRLEMH 141 (211)
Q Consensus 64 ~~~~~~~~~~~~~la~~i~~-~~~d~Iv~i~~gG~~~A~~lA~~L~~p-~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~ 141 (211)
+.++...+..+..+++++.+ .+.++|+|++.||+.+|..+|+.|++| +..++..... .. +.+.+.+.
T Consensus 6 l~~~~~i~~~~~~La~~i~~~~~~~~vvgi~~Gg~~~a~~la~~l~~~~~~~i~~~~y~-~~----------~~~~~~~~ 74 (152)
T 1nul_A 6 IVTWDMLQIHARKLASRLMPSEQWKGIIAVSRGGLVPGALLARELGIRHVDTVCISSYD-HD----------NQRELKVL 74 (152)
T ss_dssp ECCHHHHHHHHHHHHHHHCSGGGCSEEEEEETTTHHHHHHHHHHHTCCCEEEEEEEC-------------------CEEE
T ss_pred ecCHHHHHHHHHHHHHHHHHHcCCCEEEEEcCCCHHHHHHHHHHcCCCcceEEEEEEec-Cc----------ccceEEEe
Confidence 45667777788889988875 356899999999999999999999999 6555422211 00 00111222
Q ss_pred cCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchh
Q 028297 142 VGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEG 190 (211)
Q Consensus 142 ~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~ 190 (211)
.+...+||+||||||+++||+|+.++++.|++ +.++++++++..
T Consensus 75 ~~~~~~gk~VliVDDii~TG~Tl~~a~~~l~~-----v~~a~L~~k~~~ 118 (152)
T 1nul_A 75 KRAEGDGEGFIVIDDLVDTGGTAVAIREMYPK-----AHFVTIFAKPAG 118 (152)
T ss_dssp ECCSSCCTTEEEEEEEECTTSSHHHHHHHCTT-----SEEEEEEECGGG
T ss_pred cCCCCCcCEEEEEEeecCchHHHHHHHHHHhh-----CCEEEEEECCCC
Confidence 22235899999999999999999999999986 789999999853
No 44
>1w30_A PYRR bifunctional protein; transferase, glycosyltransferase, PSI, protein structure initiative, TB structural genomics consortium, TB; 1.9A {Mycobacterium tuberculosis} SCOP: c.61.1.1
Probab=99.62 E-value=1.9e-15 Score=122.26 Aligned_cols=121 Identities=17% Similarity=0.195 Sum_probs=82.8
Q ss_pred HhcCHHHHHHHHHHHHHHHhhc-----------CCcEEEEecCCccchHHHHHHHh----CCCeEE--eecCCCCCCcee
Q 028297 63 LLLDHKAFKDTVDIFVDRYRDM-----------GISVVAGIEARGFVFGPSIALAI----GAKFVP--LRKPNKLPGEVI 125 (211)
Q Consensus 63 l~~~~~~~~~~~~~la~~i~~~-----------~~d~Iv~i~~gG~~~A~~lA~~L----~~p~~~--~~k~~~~~~~~~ 125 (211)
++.+++..+...+.++.++.+. +.++|++++.||+++|..+|+.| ++|+.. +...........
T Consensus 15 ~l~~~~~i~~~i~~La~~i~~~~~~~~~~~~~~~~~vvvgi~~gG~~~a~~La~~L~~~~g~p~~~~~l~~~~y~~~~~~ 94 (201)
T 1w30_A 15 ELMSAANVGRTISRIAHQIIEKTALDDPVGPDAPRVVLLGIPTRGVTLANRLAGNITEYSGIHVGHGALDITLYRDDLMI 94 (201)
T ss_dssp EEECHHHHHHHHHHHHHHHHHHTTTTSCCBTTBCCEEEEECTTHHHHHHHHHHHHHHHHHSCCCEEEECCCGGGCC----
T ss_pred EEeCHHHHHHHHHHHHHHHHHHccccccccccCCCcEEEEEcccHHHHHHHHHHHHhHHHCCCcccceEEEEEecCCccc
Confidence 4456677777777777666432 45799999999999999999998 576432 322211100000
Q ss_pred eeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEEEEEEEEeCc
Q 028297 126 SEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMG-AEVVECACVVGLP 188 (211)
Q Consensus 126 ~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V~v~~~~~~~ 188 (211)
.. ......+.+ .....+||+||||||++|||+|+.++++.|+++| +++|.++++++++
T Consensus 95 ~~----~~~~~~~~~-~~~~~~gk~VlLVDDVitTG~Tl~aa~~~L~~~G~a~~V~vavlv~k~ 153 (201)
T 1w30_A 95 KP----PRPLASTSI-PAGGIDDALVILVDDVLYSGRSVRSALDALRDVGRPRAVQLAVLVDRG 153 (201)
T ss_dssp --------CCCCCBC-CTTCSTTCEEEEEEEEESSSHHHHHHHHHHHHHCCCSEEEEEEEEECC
T ss_pred cc----cceeecccC-CCccCCCCEEEEECCccchHHHHHHHHHHHHhCCCCcEEEEEEEEecC
Confidence 00 000011111 1122589999999999999999999999999999 9999999999985
No 45
>1ecf_A Glutamine phosphoribosylpyrophosphate amidotransf; purine biosynthesis, transferase, glycosyltransferase, gluta amidotransferase; HET: PIN; 2.00A {Escherichia coli} SCOP: c.61.1.1 d.153.1.1 PDB: 1ecb_A* 1ecc_A* 1ecg_A* 1ecj_A*
Probab=99.60 E-value=1.8e-15 Score=137.76 Aligned_cols=115 Identities=16% Similarity=0.158 Sum_probs=80.6
Q ss_pred HHHHHHHHHHhh----cCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce--eeeeeeeecCceeEEEecCC
Q 028297 72 DTVDIFVDRYRD----MGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV--ISEAYVLEYGTDRLEMHVGA 144 (211)
Q Consensus 72 ~~~~~la~~i~~----~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~ 144 (211)
.+++.|++++.+ .++|+|+++|.+|+.+|..+|+.+++|+.. +.|.+....+. ..+..+....+..+......
T Consensus 277 ~lg~~La~~i~~~~~~~~~dvVv~vP~~g~~~A~~la~~lg~p~~~~~~k~r~~~~t~i~~~~~~R~~~v~~~~~~~~~~ 356 (504)
T 1ecf_A 277 NMGTKLGEKIAREWEDLDIDVVIPIPETSCDIALEIARILGKPYRQGFVKNRYVGRTFIMPGQQLRRKSVRRKLNANRAE 356 (504)
T ss_dssp HHHHHHHHHHHHHTTTCCCCEEEECTTTTHHHHHHHHHHHTCCBCCCEEECSCCCCCCCCSSSCCCCCCSTTTEEECGGG
T ss_pred HHHHHHHHHHHHHcCCCCCeEEEEECCcHHHHHHHHHHHhCCCceeeEEEecccCCceeCccHHHHHHHHHhhhcccccc
Confidence 556666665532 347999999999999999999999999863 33332211111 01111111112234432333
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeC
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGL 187 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~ 187 (211)
.+||+||||||++|||+|+.+++++|+++||++|++++++..
T Consensus 357 -v~Gk~VllVDDii~TG~Tl~~~~~~L~~~Ga~~V~~~~l~~~ 398 (504)
T 1ecf_A 357 -FRDKNVLLVDDSIVRGTTSEQIIEMAREAGAKKVYLASAAPE 398 (504)
T ss_dssp -TTTCCEEEEESCCSSSHHHHHHHHHHHHTTCSSEEEEESSCC
T ss_pred -CCCCeEEEEeccccccHHHHHHHHHHHhcCCcEEEEEEEecC
Confidence 599999999999999999999999999999999999998744
No 46
>2xbu_A Hypoxanthine-guanine phosphoribosyltransferase; glycosyltransferase, purine salvage, FLIP pepti; HET: 5GP; 1.80A {Saccharomyces cerevisiae} PDB: 2jkz_A* 2jky_A*
Probab=99.58 E-value=7.7e-15 Score=120.36 Aligned_cols=125 Identities=14% Similarity=0.157 Sum_probs=84.4
Q ss_pred hcCHHHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCC------CeEEeecCCCCCCceeeeeeeeecCcee
Q 028297 64 LLDHKAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGA------KFVPLRKPNKLPGEVISEAYVLEYGTDR 137 (211)
Q Consensus 64 ~~~~~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~------p~~~~~k~~~~~~~~~~~~~~~~~~~~~ 137 (211)
+.+....+..++.|+.++.+.++++|+|++.||+.+|..||+.|++ |+..++............ .....+...
T Consensus 8 ~is~~~i~~~i~~LA~~I~~~~~~vIVgI~~GG~~~A~~La~~L~~~~~~~lpi~~i~~s~y~~~~~~~~-~~~~~g~~~ 86 (221)
T 2xbu_A 8 YISYNNVHQLCQVSAERIKNFKPDLIIAIGGGGFIPARILRTFLKEPGVPTIRIFAIILSLYEDLNSVGS-EVEEVGVKV 86 (221)
T ss_dssp ECCHHHHHHHHHHHHHHHTTTCCSEEEEEHHHHHHHHHHHHHHHCCTTSCCCEEEEEEEEEEC--------------CEE
T ss_pred ecCHHHHHHHHHHHHHHhccCCCCEEEEECCCcHHHHHHHHHHhCCCCCCCccEEEEEEEEecCCccccc-cccccCcee
Confidence 3455666777888888885557899999999999999999999998 343333111000000000 000001111
Q ss_pred EE---Ee---cCCcCCCCEEEEEeccccchHHHHHHHHHHHh--------CCC---------eEEEEEEEEeCch
Q 028297 138 LE---MH---VGAIEPGERALVIDDLVATGGTLSAAVRLLER--------MGA---------EVVECACVVGLPE 189 (211)
Q Consensus 138 ~~---~~---~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~--------~Ga---------~~V~v~~~~~~~~ 189 (211)
+. .. .....+||+||||||+++||+||.++++.|++ .|+ +.+.++|+++++.
T Consensus 87 ~~~~~~~~~~~~~~v~Gk~VLIVDDIidTG~Tl~aa~~~L~~~ga~~~~~~g~~~~~~~~~~~~v~iavL~~K~~ 161 (221)
T 2xbu_A 87 SRTQWIDYEQCKLDLVGKNVLIVDEVDDTRTTLHYALSELEKDAAEQAKAKGIDTEKSPEMKTNFGIFVLHDKQK 161 (221)
T ss_dssp EEEECCCHHHHTCCCTTCEEEEEEEEESSSHHHHHHHHHHHHHHHHHHHHTTCCTTTCGGGSCEEEEEEEEEECS
T ss_pred eeeeeeecccccccCCCCEEEEEeccCCcHHHHHHHHHHHHhhcchhhhhcCccccccccCcceEEEEEEEeccc
Confidence 11 10 02335999999999999999999999999997 786 5899999999875
No 47
>3acd_A Hypoxanthine-guanine phosphoribosyltransferase; rossmann fold, structural genomics, NPPSFA; HET: IMP; 1.89A {Thermus thermophilus} PDB: 3acc_A* 3acb_A*
Probab=99.53 E-value=1e-13 Score=110.35 Aligned_cols=120 Identities=19% Similarity=0.200 Sum_probs=84.2
Q ss_pred HhcCHHHHHHHHHHHHHHHhhc---CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCcee
Q 028297 63 LLLDHKAFKDTVDIFVDRYRDM---GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTDR 137 (211)
Q Consensus 63 l~~~~~~~~~~~~~la~~i~~~---~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~~ 137 (211)
++.+.+..+...+.+|.+|.+. +..+++|+..||+.+|..|++.++.|... +.-.... +... ..+...
T Consensus 12 vlis~~~I~~~i~rlA~eI~e~~~~~~~vlvgIl~Gg~~fa~~L~~~l~~~~~~~~i~~ssy~-~~~~------~~g~~~ 84 (181)
T 3acd_A 12 VQISAEAIKKRVEELGGEIARDYQGKTPHLICVLNGAFIFMADLVRAIPLPLTMDFIAISSYG-NAFK------SSGEVE 84 (181)
T ss_dssp CCBCHHHHHHHHHHHHHHHHHHTTTCCCEEEEEETTTHHHHHHHHTTCCSCCEEEEEEEC-------------------C
T ss_pred EEeCHHHHHHHHHHHHHHHHHHhCCCCcEEEEEecCcHHHHHHHHHhcCCCccccceEEEEec-CCcC------CCCceE
Confidence 3445666666677777776543 34689999999999999999999988643 2211110 0000 001111
Q ss_pred EEEecCCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297 138 LEMHVGAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 189 (211)
Q Consensus 138 ~~~~~~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~ 189 (211)
+........+||+|||||||++||.|+.++.+.|++.|++.+.+++++++..
T Consensus 85 ~~~~~~~~i~gk~VllVDDIldTG~Tl~~~~~~l~~~~p~sv~~avLl~K~~ 136 (181)
T 3acd_A 85 LLKDLRLPIHGRDVIVVEDIVDTGLTLSYLLDYLEARKPASVRVAALLSKPS 136 (181)
T ss_dssp EEECCCSCCTTCEEEEEEEEESSSHHHHHHHHHHHTTCCSEEEEEEEEECGG
T ss_pred eccCCCcccCCCeeEEEEEEEcCchhHHHHHHHHhcCCCCEEEEEEEEEcCc
Confidence 2111233359999999999999999999999999999999999999999775
No 48
>1ao0_A Glutamine phosphoribosylpyrophosphate amidotransferase; glutamine amidotransferase, prtase, purine biosynthesis, phosphoribosyltransferase; HET: 5GP ADP; 2.80A {Bacillus subtilis} SCOP: c.61.1.1 d.153.1.1 PDB: 1gph_1*
Probab=99.52 E-value=2.3e-14 Score=129.17 Aligned_cols=115 Identities=22% Similarity=0.213 Sum_probs=81.4
Q ss_pred HHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEE-eecCCCCCCce--eeeeeeeecCceeEEEecCCc
Q 028297 69 AFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVP-LRKPNKLPGEV--ISEAYVLEYGTDRLEMHVGAI 145 (211)
Q Consensus 69 ~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~-~~k~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~ 145 (211)
....+++.+++.+. .+.|+|+++|.+|..+|..+|+.+++|+.. +.|.+....+. .++..+....+..+....+.
T Consensus 258 ~r~~lg~~La~~~~-~~~DvVV~VP~~g~~~A~~la~~lg~p~~~~l~k~r~~~~~~~~~~~~~R~~~~~~~~~~~~~~- 335 (459)
T 1ao0_A 258 ARKNLGKMLAQESA-VEADVVTGVPDSSISAAIGYAEATGIPYELGLIKNRYVGRTFIQPSQALREQGVRMKLSAVRGV- 335 (459)
T ss_dssp HHHHHHHHHHHHHC-CCCSEEECCTTTTHHHHHHHHHHHCCCBCCCEEECTTCCTTSCCCCHHHHHHTCCSSEEECHHH-
T ss_pred HHHHHHHHHHHhcc-cCCcEEEEECCcHHHHHHHHHHHhCCCCceeEEEecCCCccccCCCHHHHHhhhhhhccccccc-
Confidence 34467777777664 367999999999999999999999999863 44433211111 01111111112234432233
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVV 185 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~ 185 (211)
.+||+||||||++|||+|+.++++.|+++||++|++++++
T Consensus 336 v~gk~VlLVDDvitTG~Tl~~a~~~L~~~Ga~~V~~~~l~ 375 (459)
T 1ao0_A 336 VEGKRVVMVDDSIVRGTTSRRIVTMLREAGATEVHVKISS 375 (459)
T ss_dssp HTTCEEEEEESCCSSSHHHHHHHHHHHHTTCSEEEEEESS
T ss_pred CCCCeEEEEeeeecCHHHHHHHHHHHHHcCCCEEEEEEec
Confidence 4899999999999999999999999999999999999943
No 49
>1dqn_A Guanine phosphoribosyltransferase; protein-inhibitor complex, Mg IONS, pyrophosphate, transition state analogue; HET: IMU; 1.75A {Giardia intestinalis} SCOP: c.61.1.1 PDB: 1dqp_A*
Probab=99.35 E-value=1.1e-12 Score=108.19 Aligned_cols=110 Identities=8% Similarity=0.153 Sum_probs=78.2
Q ss_pred hcCHHHHHHHHHHHHHHHhhc-----CCcEEEEecCCccchHHHHHHHhCCCeEE--eecCCCCCCceeeeeeeeecCce
Q 028297 64 LLDHKAFKDTVDIFVDRYRDM-----GISVVAGIEARGFVFGPSIALAIGAKFVP--LRKPNKLPGEVISEAYVLEYGTD 136 (211)
Q Consensus 64 ~~~~~~~~~~~~~la~~i~~~-----~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~--~~k~~~~~~~~~~~~~~~~~~~~ 136 (211)
+-+++......+.+|+++.+. +.++|+|++.||+.+|..+|+.|++|+.. ++..+. .+. ...
T Consensus 35 lis~~~I~~~i~~LA~~I~~~~~~~~~~~vvVgi~~Gg~~~a~~La~~L~~p~~v~~i~vs~y-~~~---------~s~- 103 (230)
T 1dqn_A 35 LATFEECKALAADTARRMNEYYKDVAEPVTLVALLTGAYLYASLLTVHLTFPYTLHFVKVSSY-KGT---------RQE- 103 (230)
T ss_dssp EECHHHHHHHHHHHHHHHHHHHTTCSSCEEEEEETTTHHHHHHHHHTTCCSCEEEEEECCEEE-ECS---------SCE-
T ss_pred ecCHHHHHHHHHHHHHHHHHHhcCCCCCcEEEEECCCCHHHHHHHHHHhCCCceEEEEEEEEe-CCC---------ccC-
Confidence 345555666666777666532 45799999999999999999999999743 222111 000 001
Q ss_pred eEEE-ec--CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCch
Q 028297 137 RLEM-HV--GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPE 189 (211)
Q Consensus 137 ~~~~-~~--~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~ 189 (211)
...+ .. ....+||+|||||||++||.||.++++.|++ +.++++++++.
T Consensus 104 ~v~i~~~~l~~~v~Gk~VLIVDDIidTG~Tl~~a~~~L~~-----V~vavLl~k~~ 154 (230)
T 1dqn_A 104 SVVFDEEDLKQLKEKREVVLIDEYVDSGHTIFSIQEQIKH-----AKICSCFVKDV 154 (230)
T ss_dssp EEECCHHHHHHHHHCSSEEEEEEEESSSHHHHHHHHHSTT-----CEEEEEEESCH
T ss_pred ceEEEeccCccCCCCCEEEEEeeEcChHHHHHHHHHHhhc-----CEEEEEEECCc
Confidence 1221 11 1124899999999999999999999999988 88999999886
No 50
>1o5o_A Uracil phosphoribosyltransferase; TM0721, structural genomic PSI, protein structure initiative, joint center for structu genomics; HET: U5P; 2.30A {Thermotoga maritima} SCOP: c.61.1.1
Probab=99.33 E-value=3.9e-12 Score=104.07 Aligned_cols=98 Identities=18% Similarity=0.247 Sum_probs=75.2
Q ss_pred cEEEEecCCccchHHHHHHHh-CCCeEEeecCCCCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHHH
Q 028297 87 SVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL 164 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~Tl 164 (211)
-++|+|.++|+.++..+++.+ ++++..+...+.... ++... ....+...+||+|+||||+++||+|+
T Consensus 84 lviV~IlrgG~~~~~~l~~~lp~a~vg~I~~~Rd~~t-----------~~~~~~~~~lp~di~gr~VilvDd~laTG~Tl 152 (221)
T 1o5o_A 84 IVVVPILRAGLVMADGILELLPNASVGHIGIYRDPET-----------LQAVEYYAKLPPLNDDKEVFLLDPMLATGVSS 152 (221)
T ss_dssp EEEEEEETTHHHHHHHHHHHSTTCEECEEEEEECTTT-----------CCEEEEEEECCCCCTTCEEEEECSEESSSHHH
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEcCCC-----------CceeEEEecCCCccCCCEEEEECCccccHHHH
Confidence 488999999999999999999 566554443332110 00011 11223335899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297 165 SAAVRLLERMGAEVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 165 ~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~ 195 (211)
.++++.|++.|++.+.++|++..+++.++|.
T Consensus 153 ~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 183 (221)
T 1o5o_A 153 IKAIEILKENGAKKITLVALIAAPEGVEAVE 183 (221)
T ss_dssp HHHHHHHHHTTCCEEEEECSEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 9999999999999999999999988888875
No 51
>1i5e_A Uracil phosphoribosyltransferase; salvage pathway; HET: U5P; 3.00A {Bacillus caldolyticus} SCOP: c.61.1.1
Probab=99.32 E-value=6.1e-12 Score=102.22 Aligned_cols=99 Identities=21% Similarity=0.271 Sum_probs=74.0
Q ss_pred CcEEEEecCCccchHHHHHHHh-CCCeEEeecCCCCCCceeeeeeeeecCce-eEEEecCCcCCCCEEEEEeccccchHH
Q 028297 86 ISVVAGIEARGFVFGPSIALAI-GAKFVPLRKPNKLPGEVISEAYVLEYGTD-RLEMHVGAIEPGERALVIDDLVATGGT 163 (211)
Q Consensus 86 ~d~Iv~i~~gG~~~A~~lA~~L-~~p~~~~~k~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~gk~VLIVDDiitTG~T 163 (211)
..+++++.++|+.++..+.+.+ +.++..+.+.+.... .+. .+....+...+||+|||||||++||+|
T Consensus 71 ~~~vV~Ilr~G~~~~~~L~~~l~~~~~~~i~~~r~~~t-----------~~~~~~~~~lp~~i~~~~VllvDd~l~TG~T 139 (209)
T 1i5e_A 71 KLGVIPILRAGIGMVDGILKLIPAAKVGHIGLYRDPQT-----------LKPVEYYVKLPSDVEERDFIIVDPMLATGGS 139 (209)
T ss_dssp CEEEEEBTTGGGGGHHHHHHHCTTSEECEEEEECCTTC-----------SSCEEEEEECCTTTTTSEEEEECSEESSSHH
T ss_pred ceEEEEEecCChHHHHHHHHhCCCCeEEEEEEEEcCCC-----------CceEEEEEcCCCccCCCEEEEEcCCCcCHHH
Confidence 3588999999999999999988 455544433221111 011 111122333589999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297 164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~ 195 (211)
+.++++.|+++|++.|.+++++..+++.+++.
T Consensus 140 ~~~a~~~L~~~G~~~I~~~~lv~~~~g~~~l~ 171 (209)
T 1i5e_A 140 AVAAIDALKKRGAKSIKFMCLIAAPEGVKAVE 171 (209)
T ss_dssp HHHHHHHHHHTTCCCEEEECSEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence 99999999999999999999999888777775
No 52
>2ehj_A Uracil phosphoribosyltransferase; structural genomics; 2.80A {Escherichia coli}
Probab=99.20 E-value=1.1e-10 Score=94.61 Aligned_cols=97 Identities=21% Similarity=0.251 Sum_probs=72.1
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT 163 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T 163 (211)
-++|++-++|+.++..+.+.+. +++..+.-.+ .... +... ....+...+||+|+||||+++||+|
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~i~~~rd~~t~------------~~~~~~~~lp~di~~r~VilvDd~laTG~T 138 (208)
T 2ehj_A 71 ITVVPILRAGLGMMDGVLENVPSARISVVGMYRNEETL------------EPVPYFQKLVSNIDERMALIVDPMLATGGS 138 (208)
T ss_dssp CEEEEBTTGGGGGHHHHHHHCTTCEECEEEEEECTTTC------------CEEEEEEECCSCGGGCEEEEEEEEESSCHH
T ss_pred eEEEEeecCHHHHHHHHHHhCCcCceeEEEEEEcCCCC------------ceEEEecCCCCccCCCEEEEECCccccHHH
Confidence 4899999999999999999885 2222221111 1111 1111 1122333589999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297 164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~ 195 (211)
+.++++.|++.|++.+.++|++..+++.+++.
T Consensus 139 ~~~ai~~L~~~G~~~I~~~~lv~~p~g~~~l~ 170 (208)
T 2ehj_A 139 VIATIDLLKKAGCSSIKVLVLVAAPEGIAALE 170 (208)
T ss_dssp HHHHHHHHHHTTCCEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 99999999999999999999999998777775
No 53
>2e55_A Uracil phosphoribosyltransferase; structural genomics; 2.15A {Aquifex aeolicus}
Probab=99.19 E-value=1.6e-10 Score=93.65 Aligned_cols=96 Identities=23% Similarity=0.285 Sum_probs=72.1
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT 163 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T 163 (211)
-++|++-++|+.++..+.+.+. +++..+...+ .... +... ....+ ..+||+|+||||+++||+|
T Consensus 70 ~~~V~ILraG~~~~~~l~~~lp~~~vg~i~~~rd~~t~------------~~~~~~~~lp-di~~r~vilvDd~laTG~T 136 (208)
T 2e55_A 70 IVFVPILRAGLSFLEGALQVVPNAKVGFLGIKRNEETL------------ESHIYYSRLP-ELKGKIVVILDPMLATGGT 136 (208)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCEECEEEEEECTTTC------------CEEEEEEECC-CCBTSEEEEECSEESSSHH
T ss_pred EEEEEEecchHHHHHHHHHhCCCCcEEEEEEEEecCCC------------ceEEEecCCC-CCCCCEEEEECCccccHHH
Confidence 4888999999999999999886 2222221111 1111 1111 12224 4589999999999999999
Q ss_pred HHHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297 164 LSAAVRLLERMGAEVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 164 l~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~ 195 (211)
+.++++.|++.|++.+.+++++..+++.++|.
T Consensus 137 ~~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 168 (208)
T 2e55_A 137 LEVALREILKHSPLKVKSVHAIAAPEGLKRIE 168 (208)
T ss_dssp HHHHHHHHHTTCBSEEEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHHcCCCEEEEEEEEECHHHHHHHH
Confidence 99999999999999999999999988877775
No 54
>1v9s_A Uracil phosphoribosyltransferase; pyrimidine salvage, oligomerization, structural genomics, RI structural genomics/proteomics initiative; 2.10A {Thermus thermophilus} SCOP: c.61.1.1
Probab=99.14 E-value=7.5e-11 Score=95.65 Aligned_cols=98 Identities=24% Similarity=0.295 Sum_probs=71.2
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHHH
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGTL 164 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~Tl 164 (211)
-++|++-++|+.++..+.+.+. +++..+.-.+.. .+ ++... ....+...+||+|+||||+++||+|+
T Consensus 71 l~~V~ILraG~~~~~~l~~~ip~~~vg~I~~~rd~--~t---------~~~~~~~~~lp~di~~r~vilvDd~laTG~T~ 139 (208)
T 1v9s_A 71 LALVAILRAGLVMVEGILKLVPHARVGHIGLYRDP--ES---------LNPVQYYIKLPPDIAERRAFLLDPMLATGGSA 139 (208)
T ss_dssp CEEEEETTTHHHHHHHHHTTCTTCEEEEEEEC--------------------CEEEECCSCGGGSCEEEECSEESSSHHH
T ss_pred eEEEEeccchHHHHHHHHHhCCCCeeeEEEEEEcC--CC---------CCceEEeccCCCccCCCEEEEECCccccHHHH
Confidence 4899999999999999998875 233222222110 00 01011 11223334899999999999999999
Q ss_pred HHHHHHHHhCCCeEEEEEEEEeCchhhcccC
Q 028297 165 SAAVRLLERMGAEVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 165 ~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~ 195 (211)
.++++.|++.|++.+.++|++..+++.+++.
T Consensus 140 ~~ai~~L~~~G~~~I~~~~lv~~~~g~~~l~ 170 (208)
T 1v9s_A 140 SLALSLLKERGATGVKLMAILAAPEGLERIA 170 (208)
T ss_dssp HHHHHHHHHTTCCSCEEEEEEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCEEEEEEEEeCHHHHHHHH
Confidence 9999999999999999999999988888775
No 55
>1bd3_D Uprtase, uracil phosphoribosyltransferase; glycosyltransferase; 1.93A {Toxoplasma gondii} SCOP: c.61.1.1 PDB: 1bd4_D 1jlr_A* 1jls_B* 1upf_D 1upu_D*
Probab=99.13 E-value=2.5e-10 Score=94.54 Aligned_cols=111 Identities=15% Similarity=0.209 Sum_probs=77.8
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEeecCC-CCCCceeeeeeeeecCceeE-EEecCCcCCCCEEEEEeccccchHH
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPN-KLPGEVISEAYVLEYGTDRL-EMHVGAIEPGERALVIDDLVATGGT 163 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~-~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk~VLIVDDiitTG~T 163 (211)
-++|++-++|+.++..+.+.+. +++..+.-.+ .... +..+ ....+...+||+|+||||+++||+|
T Consensus 104 l~~V~ILRaG~~m~~~l~~~ip~a~vg~I~~~Rd~~t~------------~~~~~~~~lp~di~~r~VilvDdmlaTG~T 171 (243)
T 1bd3_D 104 ICGVSIVRAGESMESGLRAVCRGVRIGKILIQRDETTA------------EPKLIYEKLPADIRERWVMLLDPMCATAGS 171 (243)
T ss_dssp EEEEEEETTTHHHHHHHHHHSTTCCEEEEEEEECSSSC------------CEEEEEEECCTTGGGSEEEEECSEESSCHH
T ss_pred EEEEEEEcchHHHHHHHHHhCCcCeeeeEEEEEcCCCC------------CeEEEeccCCcccCCCEEEEECCccccHHH
Confidence 3688899999999999999885 3433222111 1111 1112 1222333589999999999999999
Q ss_pred HHHHHHHHHhCCC--eEEEEEEEEeCchhhcccC----CCCeEEEEccccccc
Q 028297 164 LSAAVRLLERMGA--EVVECACVVGLPEGQRRLD----GKPLYILVEPRLSVN 210 (211)
Q Consensus 164 l~~a~~~L~~~Ga--~~V~v~~~~~~~~~~~~l~----~~~l~sl~~~~~~~~ 210 (211)
+.++++.|++.|+ +.+.++|++..+++.++|. ++.+.. ..+++.+|
T Consensus 172 ~~~ai~~L~~~G~~p~~I~~~~lvaap~g~~~l~~~~p~v~I~t-a~ID~~Ln 223 (243)
T 1bd3_D 172 VCKAIEVLLRLGVKEERIIFVNILAAPQGIERVFKEYPKVRMVT-AAVDICLN 223 (243)
T ss_dssp HHHHHHHHHHHTCCGGGEEEEEEEECHHHHHHHHHHCTTSEEEE-EEECSEEC
T ss_pred HHHHHHHHHHcCCCcceEEEEEEEeCHHHHHHHHHHCCCCEEEE-EEecCCcC
Confidence 9999999999999 9999999999988877775 444443 34444443
No 56
>3dmp_A Uracil phosphoribosyltransferase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 2.60A {Burkholderia pseudomallei} SCOP: c.61.1.1
Probab=98.98 E-value=1e-09 Score=89.54 Aligned_cols=96 Identities=19% Similarity=0.189 Sum_probs=71.4
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEeecCCCC-CCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchHHH
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLRKPNKL-PGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGGTL 164 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~k~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~Tl 164 (211)
-++|++-++|..++..+.+.+. +++..+...|.. .+.. ......+ ..+|++|+|+||++.||+|+
T Consensus 79 i~~V~IlRaG~~m~~~l~~~ip~a~vg~i~~~Rd~~t~p~------------~~~~~lP-~i~~~~VilvD~~laTG~T~ 145 (217)
T 3dmp_A 79 LAIVPVLRAGVGMSDGLLELIPSARVGHIGVYRADDHRPV------------EYLVRLP-DLEDRIFILCDPMVATGYSA 145 (217)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTSEECEEECSCCCSSSCC------------CSEEECC-CCTTCEEEEECSEESSSHHH
T ss_pred EEEEEecccchHHHHHHHHhCcCCceeEEEEEECCCCCcE------------EEeecCC-CCCCCEEEEEcCcccccHHH
Confidence 4788999999999999999984 444333211110 0100 0111224 35899999999999999999
Q ss_pred HHHHHHHHhCCC--eEEEEEEEEeCchhhcccC
Q 028297 165 SAAVRLLERMGA--EVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 165 ~~a~~~L~~~Ga--~~V~v~~~~~~~~~~~~l~ 195 (211)
.+|++.|++.|+ +.+.++|++..++|.+++.
T Consensus 146 ~~ai~~L~~~G~pe~~I~~~~~vaa~egl~~l~ 178 (217)
T 3dmp_A 146 AHAIDVLKRRGVPGERLMFLALVAAPEGVQVFQ 178 (217)
T ss_dssp HHHHHHHHTTTCCGGGEEEECSEECHHHHHHHH
T ss_pred HHHHHHHHHcCCCcCeEEEEEEEeCHHHHHHHH
Confidence 999999999999 9999999999888777764
No 57
>1xtt_A Probable uracil phosphoribosyltransferase; tetramer, type 1 phosphoribosyltransferase, UMP complex; HET: U5P; 1.80A {Sulfolobus solfataricus} SCOP: c.61.1.1 PDB: 1vst_A* 1xtu_A* 1xtv_A* 3g6w_A*
Probab=98.80 E-value=1.3e-08 Score=82.85 Aligned_cols=102 Identities=10% Similarity=0.098 Sum_probs=69.8
Q ss_pred cEEEEecCCccchHHHHHHHhC-CCeEEee-cCCCCCCceeeeeeeeecCceeE-EEecCCcCCCC--EEEEEeccccch
Q 028297 87 SVVAGIEARGFVFGPSIALAIG-AKFVPLR-KPNKLPGEVISEAYVLEYGTDRL-EMHVGAIEPGE--RALVIDDLVATG 161 (211)
Q Consensus 87 d~Iv~i~~gG~~~A~~lA~~L~-~p~~~~~-k~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~gk--~VLIVDDiitTG 161 (211)
-++|++-++|..++..+.+.+. ++...+. .|....+.... ...+... ....+ ..+++ +|+|+||++.||
T Consensus 73 i~iV~IlRaG~~m~~gl~~~lp~a~vg~I~~~Rd~~t~~~~~-----~~~~p~~~y~klP-~i~~~~~~VilvDp~laTG 146 (216)
T 1xtt_A 73 IVIINILRAAVPLVEGLLKAFPKARQGVIGASRVEVDGKEVP-----KDMDVYIYYKKIP-DIRAKVDNVIIADPMIATA 146 (216)
T ss_dssp EEEEEEETTTHHHHHHHHHHCTTCEEEEEEEEECCCCCSSCC-----SCCCEEEEEEECC-CCCTTTCEEEEECSEESSS
T ss_pred EEEEeecCCcHHHHHHHHHHcccCccceEEEEECCCcccccc-----cccCceEeeccCC-CccCCcceEEEEcCCccch
Confidence 4788999999999999999874 3443221 11111100000 0000111 12224 35888 999999999999
Q ss_pred HHHHHHHHHHHhCCC-eEEEEEEEEeCchhhcccC
Q 028297 162 GTLSAAVRLLERMGA-EVVECACVVGLPEGQRRLD 195 (211)
Q Consensus 162 ~Tl~~a~~~L~~~Ga-~~V~v~~~~~~~~~~~~l~ 195 (211)
+|+.+|++.|++ |+ +.+.++|++..+++.+++.
T Consensus 147 ~T~~~ai~~L~~-G~p~~I~~~~~vaa~~gl~~l~ 180 (216)
T 1xtt_A 147 STMLKVLEEVVK-ANPKRIYIVSIISSEYGVNKIL 180 (216)
T ss_dssp HHHHHHHHHHGG-GCCSEEEEECSEEEHHHHHHHH
T ss_pred HHHHHHHHHHHh-CCCCeEEEEEEecCHHHHHHHH
Confidence 999999999999 99 9999999998888777764
No 58
>3dah_A Ribose-phosphate pyrophosphokinase; pyrophosphoki seattle structural genomics center for infectious disease, magnesium, metal binding; HET: AMP; 2.30A {Burkholderia pseudomallei}
Probab=88.34 E-value=3.7 Score=34.76 Aligned_cols=76 Identities=17% Similarity=0.194 Sum_probs=49.6
Q ss_pred CccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccchH----HHHHHHHH
Q 028297 95 RGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATGG----TLSAAVRL 170 (211)
Q Consensus 95 gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG~----Tl~~a~~~ 170 (211)
+.-.+|..+|+.||+|+..+..++-..++. .+.+ ....+|++|.||-.....-. -+.-++++
T Consensus 15 ~~~~La~~ia~~lg~~l~~~~~~~F~dGE~------------~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA 80 (319)
T 3dah_A 15 ANPALAQEVVKILGIPLGKAMVSRFSDGEI------------QVEI--QENVRGKDVFVLQSTCAPTNDNLMELMIMVDA 80 (319)
T ss_dssp SCHHHHHHHHHHHTSCCCCEEEEECTTSCE------------EEEE--CSCCBTCEEEEECCCCSSHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHhCCceeeeEEEECCCCCE------------EEEE--CCCcCCCeEEEEccCCCCCcHHHHHHHHHHHH
Confidence 334699999999999876644333222321 2333 34459999999977654322 14567788
Q ss_pred HHhCCCeEEEEEEE
Q 028297 171 LERMGAEVVECACV 184 (211)
Q Consensus 171 L~~~Ga~~V~v~~~ 184 (211)
++.+||+++.++.-
T Consensus 81 ~k~asA~rIt~ViP 94 (319)
T 3dah_A 81 LKRASAGRITAAIP 94 (319)
T ss_dssp HHHTTBSEEEEEES
T ss_pred HHHcCCcEEEEEcc
Confidence 89999998865543
No 59
>1u9y_A RPPK;, ribose-phosphate pyrophosphokinase; PRPP synthase, transferase; 2.65A {Methanocaldococcus jannaschii} SCOP: c.61.1.2 c.61.1.2 PDB: 1u9z_A*
Probab=86.77 E-value=3.5 Score=34.14 Aligned_cols=73 Identities=10% Similarity=0.070 Sum_probs=48.0
Q ss_pred cchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hH--HHHHHHHHHHh
Q 028297 97 FVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG--TLSAAVRLLER 173 (211)
Q Consensus 97 ~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~--Tl~~a~~~L~~ 173 (211)
-.+|..+|+.||+|+..+..++-..++. .+.+ ....+|++|.|+-..... -. -+.-+++++++
T Consensus 10 ~~la~~ia~~l~~~l~~~~~~~F~dGE~------------~v~i--~~~vrg~dv~iiqs~~~pn~~lmell~~~~a~~~ 75 (284)
T 1u9y_A 10 QNLAFKVAKLLNTKLTRVEYKRFPDNEI------------YVRI--VDEINDDEAVIINTQKNQNDAIVETILLCDALRD 75 (284)
T ss_dssp HHHHHHHHHHTTCCEECEEEEECTTCCE------------EEEE--CSCCCSSEEEEECCCSSHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHhCCeeeeeEEEECCCCCE------------EEEe--CCCCCCCEEEEEeCCCCCcHHHHHHHHHHHHHHH
Confidence 4689999999999987654333222321 2332 334589999999886542 11 24456788899
Q ss_pred CCCeEEEEEE
Q 028297 174 MGAEVVECAC 183 (211)
Q Consensus 174 ~Ga~~V~v~~ 183 (211)
+||+.+.++.
T Consensus 76 ~~a~~i~~v~ 85 (284)
T 1u9y_A 76 EGVKKITLVA 85 (284)
T ss_dssp TTCCEEEEEC
T ss_pred cCCceEEEEe
Confidence 9999875543
No 60
>3s5j_B Ribose-phosphate pyrophosphokinase 1; nucleotide synthesis, transferase; 2.02A {Homo sapiens} PDB: 2hcr_A* 3efh_A 2h06_A 2h07_A 2h08_A
Probab=84.42 E-value=9.4 Score=32.31 Aligned_cols=74 Identities=15% Similarity=0.118 Sum_probs=47.7
Q ss_pred ccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hH---HHHHHHHHH
Q 028297 96 GFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GG---TLSAAVRLL 171 (211)
Q Consensus 96 G~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~---Tl~~a~~~L 171 (211)
.-.+|..+|+.||+|+..+..++-..++. .+++ ....+|++|.||-..... -. -+.-+++++
T Consensus 12 ~~~La~~ia~~lg~~l~~~~~~~F~dGE~------------~v~i--~esvrg~dV~iiqs~~~p~nd~lmeLl~~idA~ 77 (326)
T 3s5j_B 12 HQDLSQKIADRLGLELGKVVTKKFSNQET------------CVEI--GESVRGEDVYIVQSGCGEINDNLMELLIMINAC 77 (326)
T ss_dssp CCHHHHHHHHHTTCCCCCEEEEECTTSCE------------EEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHHHH
T ss_pred CHHHHHHHHHHhCCceeeeEEeECCCCCE------------EEEE--CCCcCCCcEEEEecCCCCccHHHHHHHHHHHHH
Confidence 34699999999999986544333222322 2333 344599999999865432 11 233566788
Q ss_pred HhCCCeEEEEEE
Q 028297 172 ERMGAEVVECAC 183 (211)
Q Consensus 172 ~~~Ga~~V~v~~ 183 (211)
+.+||+++.++.
T Consensus 78 k~asA~rIt~Vi 89 (326)
T 3s5j_B 78 KIASASRVTAVI 89 (326)
T ss_dssp HHTTCSEEEEEE
T ss_pred HhcCCcEEEEec
Confidence 999999886643
No 61
>1dku_A Protein (phosphoribosyl pyrophosphate synthetase); open alpha-beta structure, domain duplication, phosphoribosyltransferase type I fold; HET: AP2 ABM; 2.20A {Bacillus subtilis} SCOP: c.61.1.2 c.61.1.2 PDB: 1dkr_A* 1ibs_A*
Probab=79.72 E-value=18 Score=30.28 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=49.5
Q ss_pred CCccchHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccch-H---HHHHHHH
Q 028297 94 ARGFVFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVATG-G---TLSAAVR 169 (211)
Q Consensus 94 ~gG~~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitTG-~---Tl~~a~~ 169 (211)
.+.-.+|..+|+.||+|+..+..++-..++. .+. .....+|++|.||-.....- . -+.-.+.
T Consensus 16 ~~~~~la~~ia~~lg~~l~~~~~~~F~dGE~------------~v~--i~e~vrg~dv~iiqs~~~~~nd~lmell~~~~ 81 (317)
T 1dku_A 16 NSNPELAKEIADIVGVQLGKCSVTRFSDGEV------------QIN--IEESIRGCDCYIIQSTSDPVNEHIMELLIMVD 81 (317)
T ss_dssp SSCHHHHHHHHHHHTCCCCCEEEEECTTSCE------------EEE--ECSCCTTCEEEEECCCCSSHHHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHhCCeeEeeEEEECCCCCE------------EEE--ecCCCCCCEEEEEcCCCCCCcHHHHHHHHHHH
Confidence 3445799999999999986654333222221 233 23445899999998765421 1 2444567
Q ss_pred HHHhCCCeEEEEEEEE
Q 028297 170 LLERMGAEVVECACVV 185 (211)
Q Consensus 170 ~L~~~Ga~~V~v~~~~ 185 (211)
.++.++++.+.++...
T Consensus 82 a~~~~~a~~i~av~pY 97 (317)
T 1dku_A 82 ALKRASAKTINIVIPY 97 (317)
T ss_dssp HHHHTTCSEEEEEESS
T ss_pred HhhccCcceEEEEEEc
Confidence 7788899987765543
No 62
>2ji4_A Phosphoribosyl pyrophosphate synthetase-associated protein 2; phosphorylation, nucleotide biosynthesis, transferase; 2.55A {Homo sapiens} PDB: 2c4k_A*
Probab=78.40 E-value=8.6 Score=33.19 Aligned_cols=73 Identities=14% Similarity=0.092 Sum_probs=46.6
Q ss_pred cchHHH---HHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEecccc-chH---HHHHHHH
Q 028297 97 FVFGPS---IALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVA-TGG---TLSAAVR 169 (211)
Q Consensus 97 ~~~A~~---lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiit-TG~---Tl~~a~~ 169 (211)
-.+|.. +|+.||+|+..+..++-..++. .+.+ +...+|++|.||-.... .-. -+.-+++
T Consensus 39 ~~la~~~~~ia~~lg~~l~~~~~~~F~dGE~------------~v~i--~esvrg~dV~iiqs~~~~~nd~lmeLl~~id 104 (379)
T 2ji4_A 39 SSCMELSKKIAERLGVEMGKVQVYQEPNRET------------RVQI--QESVRGKDVFIIQTVSKDVNTTIMELLIMVY 104 (379)
T ss_dssp GGGGHHHHHHHHHHTCCCCCEEEEECTTSCE------------EEEE--CSCCTTCEEEEECCCCSCHHHHHHHHHHHHH
T ss_pred HHHHHhHHHHHHHhCCceEeeEEEECCCCCE------------EEEe--CCCcCCCEEEEEeCCCCCccHHHHHHHHHHH
Confidence 457788 9999999976544332222221 2332 34459999999998754 122 2344667
Q ss_pred HHHhCCCeEEEEEE
Q 028297 170 LLERMGAEVVECAC 183 (211)
Q Consensus 170 ~L~~~Ga~~V~v~~ 183 (211)
+|+.++|+.+.++.
T Consensus 105 A~k~asA~rit~Vi 118 (379)
T 2ji4_A 105 ACKTSCAKSIIGVI 118 (379)
T ss_dssp HHHHTTCSEEEEEC
T ss_pred HHHhcCCceEEEEE
Confidence 88899999876543
No 63
>3lrt_A Ribose-phosphate pyrophosphokinase; phosphoribosyl transferase, ATP analog binding, ATP-binding, metal-binding, nucleotide biosynthesis; HET: ADP; 1.53A {Thermoplasma volcanium} PDB: 3lpn_A* 3nag_A* 3mbi_A*
Probab=74.23 E-value=5.5 Score=33.07 Aligned_cols=71 Identities=10% Similarity=-0.026 Sum_probs=45.0
Q ss_pred chHHHHHHHhCCCeEEeecCCCCCCceeeeeeeeecCceeEEEecCCcCCCCEEEEEeccccc-hHH---HHHHHHHHHh
Q 028297 98 VFGPSIALAIGAKFVPLRKPNKLPGEVISEAYVLEYGTDRLEMHVGAIEPGERALVIDDLVAT-GGT---LSAAVRLLER 173 (211)
Q Consensus 98 ~~A~~lA~~L~~p~~~~~k~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gk~VLIVDDiitT-G~T---l~~a~~~L~~ 173 (211)
.+|..+|+.||+|+..+..++-..++. .++ .... |++|.||-..... -.. +.-++++++.
T Consensus 11 ~la~~ia~~lg~~l~~~~~~~F~dGE~------------~v~--i~e~--g~dV~iiqs~~~p~nd~lmeLl~~ida~k~ 74 (286)
T 3lrt_A 11 KLAARIAEELKTEPVMPDERRFPDGEL------------YLR--YDED--LTGHNIFIIGNTHSDAEVMEMILTLSAIQD 74 (286)
T ss_dssp HHHHHHHHHTTSCEECCEEEECTTSCE------------EEE--CCSC--CTTSEEEEECCCCSHHHHHHHHHHHHHGGG
T ss_pred HHHHHHHHHhCCCeeeeEEEECCCCCE------------EEE--EcCC--CCcEEEEEeCCCCCcHHHHHHHHHHHHHHH
Confidence 589999999999987644333222221 222 2332 8999998765432 122 4457788899
Q ss_pred CCCeEEEEEEE
Q 028297 174 MGAEVVECACV 184 (211)
Q Consensus 174 ~Ga~~V~v~~~ 184 (211)
+||+++.++.-
T Consensus 75 ~~A~~it~ViP 85 (286)
T 3lrt_A 75 YRTKSVNIIAP 85 (286)
T ss_dssp SCCSEEEEEES
T ss_pred cCCCEEEEEec
Confidence 99998765543
No 64
>3to5_A CHEY homolog; alpha(5)beta(5), chemotaxis, FLIM, phosphorylation, motor AC signaling protein; 1.65A {Vibrio cholerae}
Probab=57.88 E-value=13 Score=26.85 Aligned_cols=30 Identities=20% Similarity=0.338 Sum_probs=20.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeEE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V 179 (211)
++-+||||||--+.-.. ..+.|++.|...+
T Consensus 11 k~~rILiVDD~~~~r~~---l~~~L~~~G~~~v 40 (134)
T 3to5_A 11 KNMKILIVDDFSTMRRI---VKNLLRDLGFNNT 40 (134)
T ss_dssp TTCCEEEECSCHHHHHH---HHHHHHHTTCCCE
T ss_pred CCCEEEEEeCCHHHHHH---HHHHHHHcCCcEE
Confidence 45589999996655544 4456778887644
No 65
>3hix_A ALR3790 protein; rhodanese, rhodanese_3, Q8YQN0, Q8YQN0_anAsp, NSR437I, NESG, structural genomics, PSI-2, protein structure initiative; 1.92A {Anabaena SP} PDB: 3k9r_A
Probab=57.32 E-value=12 Score=25.51 Aligned_cols=32 Identities=31% Similarity=0.285 Sum_probs=26.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+++.|+++++ +|.....++..|++.|.+.|+
T Consensus 50 ~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 81 (106)
T 3hix_A 50 EKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 81 (106)
T ss_dssp CTTSCEEEECS---SHHHHHHHHHHHHHTTCSCEE
T ss_pred CCCCeEEEEEC---CCChHHHHHHHHHHcCCcCEE
Confidence 46788888875 788899999999999987654
No 66
>3ilm_A ALR3790 protein; rhodanese-like, NSR437H, NESG, structural genomics, protein structure initiative, northeast structural genomics consortium; 2.26A {Nostoc SP} PDB: 2kl3_A
Probab=53.77 E-value=15 Score=26.57 Aligned_cols=33 Identities=30% Similarity=0.305 Sum_probs=27.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|+++++ +|.....++..|++.|.+.|+
T Consensus 53 l~~~~~ivvyC~---~g~rs~~aa~~L~~~G~~~v~ 85 (141)
T 3ilm_A 53 LEKSRDIYVYGA---GDEQTSQAVNLLRSAGFEHVS 85 (141)
T ss_dssp SCTTSEEEEECS---SHHHHHHHHHHHHHTTCCSEE
T ss_pred CCCCCeEEEEEC---CChHHHHHHHHHHHcCCCCEE
Confidence 457788999876 788889999999999987654
No 67
>2jtq_A Phage shock protein E; solution structure rhodanese, stress response, transferase; NMR {Escherichia coli} PDB: 2jtr_A 2jts_A
Probab=53.24 E-value=20 Score=23.02 Aligned_cols=33 Identities=24% Similarity=0.298 Sum_probs=27.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+++.|+++.+ +|.....++..|++.|.+.+..
T Consensus 39 ~~~~~ivv~C~---~g~rs~~aa~~L~~~G~~~v~~ 71 (85)
T 2jtq_A 39 DKNDTVKVYCN---AGRQSGQAKEILSEMGYTHVEN 71 (85)
T ss_dssp CTTSEEEEEES---SSHHHHHHHHHHHHTTCSSEEE
T ss_pred CCCCcEEEEcC---CCchHHHHHHHHHHcCCCCEEe
Confidence 46788999875 6888889999999999887654
No 68
>3tum_A Shikimate dehydrogenase family protein; rossmann-fold NAD(P)(+)-binding site, shikimate dehydrogenas substrate binding domain, oxidoreductase; HET: NAD; 2.15A {Pseudomonas putida}
Probab=52.09 E-value=22 Score=29.04 Aligned_cols=33 Identities=33% Similarity=0.460 Sum_probs=28.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 182 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~ 182 (211)
.+|+++|| +.+|++.++++-.|.+.|++.+.++
T Consensus 123 ~~~~~~li----lGaGGaarai~~aL~~~g~~~i~i~ 155 (269)
T 3tum_A 123 PAGKRALV----IGCGGVGSAIAYALAEAGIASITLC 155 (269)
T ss_dssp CTTCEEEE----ECCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred cccCeEEE----EecHHHHHHHHHHHHHhCCCeEEEe
Confidence 58999996 5899999999999999999876544
No 69
>3foj_A Uncharacterized protein; protein SSP1007, structural genomics, PSI-2, protein structure initiative; 1.60A {Staphylococcus saprophyticus subsp}
Probab=50.86 E-value=28 Score=23.12 Aligned_cols=32 Identities=25% Similarity=0.348 Sum_probs=26.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|++.. .+|.....++..|++.|. .++
T Consensus 53 l~~~~~ivvyC---~~g~rs~~a~~~L~~~G~-~v~ 84 (100)
T 3foj_A 53 FNDNETYYIIC---KAGGRSAQVVQYLEQNGV-NAV 84 (100)
T ss_dssp SCTTSEEEEEC---SSSHHHHHHHHHHHTTTC-EEE
T ss_pred CCCCCcEEEEc---CCCchHHHHHHHHHHCCC-CEE
Confidence 45778999986 688888999999999998 443
No 70
>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*
Probab=48.47 E-value=26 Score=29.26 Aligned_cols=33 Identities=15% Similarity=0.221 Sum_probs=27.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 182 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~ 182 (211)
.+||++||+ .+|++-++++..|.+.|++.|.++
T Consensus 146 l~gk~~lVl----GAGGaaraia~~L~~~G~~~v~v~ 178 (312)
T 3t4e_A 146 MRGKTMVLL----GAGGAATAIGAQAAIEGIKEIKLF 178 (312)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred cCCCEEEEE----CcCHHHHHHHHHHHHcCCCEEEEE
Confidence 479999986 579999999999999999776443
No 71
>3iwh_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics, C structural genomics of infectious diseases, csgid; 2.00A {Staphylococcus aureus subsp} PDB: 3mzz_A
Probab=47.21 E-value=32 Score=23.39 Aligned_cols=51 Identities=22% Similarity=0.227 Sum_probs=33.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCchhhcccCCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLPEGQRRLDGKPLYIL 202 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~~~~~~l~~~~l~sl 202 (211)
+.+++.++++ +.+|..-..+++.|++.|.+.+. +.+-..+.. -+|.|++++
T Consensus 53 l~~~~~ivv~---C~~G~rS~~aa~~L~~~G~~~~~---l~GG~~~W~-~~g~pvesi 103 (103)
T 3iwh_A 53 FNKNEIYYIV---CAGGVRSAKVVEYLEANGIDAVN---VEGGMHAWG-DEGLEIKSI 103 (103)
T ss_dssp CCTTSEEEEE---CSSSSHHHHHHHHHHTTTCEEEE---ETTHHHHHC-SSSCBCCC-
T ss_pred hcCCCeEEEE---CCCCHHHHHHHHHHHHcCCCEEE---ecChHHHHH-HCCCcceeC
Confidence 4578888887 46888888999999999997652 221111221 247788764
No 72
>3f6p_A Transcriptional regulatory protein YYCF; unphosphorelated, receiver domain, cytoplasm, DNA-binding, phosphoprotein, transcription regulation; 1.95A {Bacillus subtilis} SCOP: c.23.1.1 PDB: 2zwm_A
Probab=45.65 E-value=41 Score=22.39 Aligned_cols=28 Identities=29% Similarity=0.305 Sum_probs=18.0
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+++||||||=-..... ....|++.|...
T Consensus 2 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v 29 (120)
T 3f6p_A 2 DKKILVVDDEKPIADI---LEFNLRKEGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCeEEEEECCHHHHHH---HHHHHHhCCEEE
Confidence 4689999995544443 445666777653
No 73
>3gk5_A Uncharacterized rhodanese-related protein TVG0868615; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.40A {Thermoplasma volcanium GSS1}
Probab=45.02 E-value=25 Score=23.91 Aligned_cols=32 Identities=31% Similarity=0.435 Sum_probs=26.2
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|+++. .+|.....++..|+++|. .|+
T Consensus 52 l~~~~~ivvyC---~~G~rs~~aa~~L~~~G~-~v~ 83 (108)
T 3gk5_A 52 LERDKKYAVIC---AHGNRSAAAVEFLSQLGL-NIV 83 (108)
T ss_dssp SCTTSCEEEEC---SSSHHHHHHHHHHHTTTC-CEE
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCC-CEE
Confidence 35778899987 688888999999999998 443
No 74
>1gmx_A GLPE protein; transferase, rhodanese, sulfurtransferase, glycerol metabolism; 1.1A {Escherichia coli} SCOP: c.46.1.3 PDB: 1gn0_A
Probab=44.94 E-value=18 Score=24.56 Aligned_cols=33 Identities=21% Similarity=0.220 Sum_probs=26.7
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|+++.+ +|.....++..|++.|.+.|+
T Consensus 55 l~~~~~ivvyc~---~g~rs~~a~~~L~~~G~~~v~ 87 (108)
T 1gmx_A 55 NDFDTPVMVMCY---HGNSSKGAAQYLLQQGYDVVY 87 (108)
T ss_dssp SCTTSCEEEECS---SSSHHHHHHHHHHHHTCSSEE
T ss_pred cCCCCCEEEEcC---CCchHHHHHHHHHHcCCceEE
Confidence 347788999875 688888999999999987654
No 75
>3gl9_A Response regulator; beta-sheet, surrounded by alpha helices, BOTH sides, signaling protein; HET: BFD; 1.80A {Thermotoga maritima} SCOP: c.23.1.0 PDB: 3dgf_C 3dge_C
Probab=44.75 E-value=43 Score=22.42 Aligned_cols=27 Identities=26% Similarity=0.327 Sum_probs=17.7
Q ss_pred CEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 149 ERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 149 k~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
++||||||=-.... .....|++.|..+
T Consensus 3 ~~ILivdd~~~~~~---~l~~~l~~~g~~v 29 (122)
T 3gl9_A 3 KKVLLVDDSAVLRK---IVSFNLKKEGYEV 29 (122)
T ss_dssp CEEEEECSCHHHHH---HHHHHHHHTTCEE
T ss_pred ceEEEEeCCHHHHH---HHHHHHHHCCcEE
Confidence 68999999554433 4445667777654
No 76
>3eod_A Protein HNR; response regulator, phosphoprotein, two-component regulatory system, signaling protein; 1.75A {Escherichia coli K12}
Probab=43.64 E-value=47 Score=22.23 Aligned_cols=29 Identities=17% Similarity=0.286 Sum_probs=20.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
++++||||||=-..... ..+.|++.|...
T Consensus 6 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~v 34 (130)
T 3eod_A 6 VGKQILIVEDEQVFRSL---LDSWFSSLGATT 34 (130)
T ss_dssp TTCEEEEECSCHHHHHH---HHHHHHHTTCEE
T ss_pred CCCeEEEEeCCHHHHHH---HHHHHHhCCceE
Confidence 67899999996555444 445677778654
No 77
>3eme_A Rhodanese-like domain protein; alpha-beta-alpha sandwich, structural genomics; 2.00A {Staphylococcus aureus subsp} PDB: 3iwh_A 3mzz_A
Probab=42.14 E-value=38 Score=22.55 Aligned_cols=32 Identities=22% Similarity=0.174 Sum_probs=25.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|+++. .+|.....++..|++.|. .++
T Consensus 53 l~~~~~iv~yC---~~g~rs~~a~~~L~~~G~-~v~ 84 (103)
T 3eme_A 53 FNKNEIYYIVC---AGGVRSAKVVEYLEANGI-DAV 84 (103)
T ss_dssp CCTTSEEEEEC---SSSSHHHHHHHHHHTTTC-EEE
T ss_pred CCCCCeEEEEC---CCChHHHHHHHHHHHCCC-CeE
Confidence 35788999987 578888889999999998 443
No 78
>4hwg_A UDP-N-acetylglucosamine 2-epimerase; ssgcid, structural genomics, seattle structural genomics center for infectious disease, isomerase; 2.00A {Rickettsia bellii}
Probab=41.92 E-value=69 Score=27.10 Aligned_cols=47 Identities=6% Similarity=-0.083 Sum_probs=33.6
Q ss_pred HHHHHHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 68 KAFKDTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 68 ~~~~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
.....+...+.+.+.+.++|+|+........++...|..+++|++.+
T Consensus 77 ~~~~~~~~~l~~~l~~~kPD~Vlv~gd~~~~~aalaA~~~~IPv~h~ 123 (385)
T 4hwg_A 77 KSIGLVIEKVDEVLEKEKPDAVLFYGDTNSCLSAIAAKRRKIPIFHM 123 (385)
T ss_dssp HHHHHHHHHHHHHHHHHCCSEEEEESCSGGGGGHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHHHHHHHhcCCcEEEEECCchHHHHHHHHHHhCCCEEEE
Confidence 33345556666677777999999987666666666677889997654
No 79
>3mm4_A Histidine kinase homolog; receiver domain, CKI1, cytokinin signaling, ROS fold, CHEY-like, transferase; 2.00A {Arabidopsis thaliana} PDB: 3mmn_A
Probab=40.76 E-value=48 Score=24.93 Aligned_cols=29 Identities=34% Similarity=0.495 Sum_probs=19.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
..+.+||||||=-.... ...+.|++.|..
T Consensus 59 ~~~~~ILiVdDd~~~~~---~l~~~L~~~g~~ 87 (206)
T 3mm4_A 59 LRGKRVLVVDDNFISRK---VATGKLKKMGVS 87 (206)
T ss_dssp TTTCEEEEECSCHHHHH---HHHHHHHHTTCS
T ss_pred cCCCEEEEEeCCHHHHH---HHHHHHHHcCCC
Confidence 47889999999654443 344566677763
No 80
>3h5i_A Response regulator/sensory box protein/ggdef domain protein; structural genomics, transcription, PSI-2; 1.90A {Carboxydothermus hydrogenoformans z-2901}
Probab=40.26 E-value=50 Score=22.60 Aligned_cols=28 Identities=18% Similarity=0.360 Sum_probs=17.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++.+||||||=-..... ..+.|.+.|..
T Consensus 4 ~~~~ilivdd~~~~~~~---l~~~L~~~g~~ 31 (140)
T 3h5i_A 4 KDKKILIVEDSKFQAKT---IANILNKYGYT 31 (140)
T ss_dssp --CEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCcEEEEEeCCHHHHHH---HHHHHHHcCCE
Confidence 46799999996554444 44556677765
No 81
>1r6j_A Syntenin 1; PDZ, membrane protein; 0.73A {Homo sapiens} SCOP: b.36.1.1 PDB: 1nte_A 1obx_A 1oby_A
Probab=39.54 E-value=37 Score=22.31 Aligned_cols=34 Identities=18% Similarity=0.112 Sum_probs=30.5
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+..|..++=|+..-.+|.|..++.++|++.|-++
T Consensus 41 l~~GD~Il~VNG~~v~~~~~~evv~llr~~g~~V 74 (82)
T 1r6j_A 41 LLTEHNICEINGQNVIGLKDSQIADILSTSGTVV 74 (82)
T ss_dssp CCSSEEEEEETTEECTTCCHHHHHHHHHHSCSEE
T ss_pred CCCCCEEEEECCEEcCCCCHHHHHHHHhcCCCEE
Confidence 5689999999999999999999999999877653
No 82
>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}
Probab=38.20 E-value=37 Score=27.81 Aligned_cols=33 Identities=18% Similarity=0.234 Sum_probs=27.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 182 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~ 182 (211)
.+||+++|+ .+|++-++++..|.+.|++.|.++
T Consensus 120 ~~~k~vlvl----GaGGaaraia~~L~~~G~~~v~v~ 152 (282)
T 3fbt_A 120 IKNNICVVL----GSGGAARAVLQYLKDNFAKDIYVV 152 (282)
T ss_dssp CTTSEEEEE----CSSTTHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCEEEEE----CCcHHHHHHHHHHHHcCCCEEEEE
Confidence 479999976 689999999999999999776543
No 83
>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*
Probab=37.98 E-value=50 Score=27.49 Aligned_cols=33 Identities=15% Similarity=0.179 Sum_probs=27.5
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECA 182 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~ 182 (211)
.+||++||+ .+|+.-++++..|.+.|++.|.++
T Consensus 152 l~gk~~lVl----GaGG~g~aia~~L~~~Ga~~V~i~ 184 (315)
T 3tnl_A 152 IIGKKMTIC----GAGGAATAICIQAALDGVKEISIF 184 (315)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTTCSEEEEE
T ss_pred ccCCEEEEE----CCChHHHHHHHHHHHCCCCEEEEE
Confidence 589999986 479999999999999999766543
No 84
>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}
Probab=37.87 E-value=48 Score=26.87 Aligned_cols=32 Identities=19% Similarity=0.326 Sum_probs=26.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+||+++|+ .+|++-++++..|.+.|++.|.+
T Consensus 118 l~~k~~lvl----GaGg~~~aia~~L~~~G~~~v~i 149 (272)
T 3pwz_A 118 LRNRRVLLL----GAGGAVRGALLPFLQAGPSELVI 149 (272)
T ss_dssp CTTSEEEEE----CCSHHHHHHHHHHHHTCCSEEEE
T ss_pred ccCCEEEEE----CccHHHHHHHHHHHHcCCCEEEE
Confidence 479999976 57999999999999999866543
No 85
>1o97_C Electron transferring flavoprotein beta-subunit; FAD binding; HET: AMP FAD; 1.6A {Methylophilus methylotrophus} SCOP: c.26.2.3 PDB: 1o95_C* 1o96_A* 1o94_C* 3clr_C* 3cls_C* 3clt_C* 3clu_C*
Probab=37.66 E-value=59 Score=26.34 Aligned_cols=42 Identities=12% Similarity=-0.058 Sum_probs=31.1
Q ss_pred HHHHHHHHHHhhcCCcEEEEecC----CccchHHHHHHHhCCCeEE
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~----gG~~~A~~lA~~L~~p~~~ 113 (211)
..++.++..+++.++|+|++... .|-.++..+|..|+.|.+.
T Consensus 99 ~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 144 (264)
T 1o97_C 99 VVGRILTEVIKKEAPDMVFAGVQSSDQAYASTGISVASYLNWPHAA 144 (264)
T ss_dssp HHHHHHHHHHHHHCCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 45556666666557898887663 3457999999999999864
No 86
>1efv_B Electron transfer flavoprotein; electron transport, glutaric acidemia type II; HET: FAD AMP; 2.10A {Homo sapiens} SCOP: c.26.2.3 PDB: 1t9g_S* 2a1u_B* 2a1t_S*
Probab=36.48 E-value=63 Score=26.05 Aligned_cols=42 Identities=7% Similarity=-0.129 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhhcCCcEEEEecC----CccchHHHHHHHhCCCeEE
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~----gG~~~A~~lA~~L~~p~~~ 113 (211)
..++.++..+++.++|+|++... .|-.++..+|..||.|.+.
T Consensus 103 ~~A~~La~~i~~~~~dlVl~G~~s~d~d~~~v~p~lA~~L~~~~vt 148 (255)
T 1efv_B 103 QVARVLAKLAEKEKVDLVLLGKQAIDDDCNQTGQMTAGFLDWPQGT 148 (255)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCCEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEeCcccCCchhhHHHHHHHHhCCCccc
Confidence 45556666665557898887653 3467999999999999854
No 87
>3g5j_A Putative ATP/GTP binding protein; N-terminal domain of ATP/GTP binding protein, PSI, MCSG, STR genomics, protein structure initiative; HET: PGE; 1.76A {Clostridium difficile}
Probab=36.48 E-value=41 Score=23.20 Aligned_cols=31 Identities=19% Similarity=0.222 Sum_probs=24.6
Q ss_pred CC-CEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 147 PG-ERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 147 ~g-k~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
++ ++|++.++ .+|.....++..|++.|. .|+
T Consensus 87 ~~~~~ivvyC~--~~G~rs~~a~~~L~~~G~-~v~ 118 (134)
T 3g5j_A 87 LNYDNIVIYCA--RGGMRSGSIVNLLSSLGV-NVY 118 (134)
T ss_dssp TTCSEEEEECS--SSSHHHHHHHHHHHHTTC-CCE
T ss_pred cCCCeEEEEEC--CCChHHHHHHHHHHHcCC-ceE
Confidence 55 88998865 578888899999999998 443
No 88
>3lte_A Response regulator; structural genomics, PSI, protein structure initiative, NYSG YORK structural genomix research consortium, nysgxrc; 2.00A {Bermanella marisrubri}
Probab=36.31 E-value=65 Score=21.50 Aligned_cols=28 Identities=32% Similarity=0.407 Sum_probs=17.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++.+||||||=-.....+ .+.|++.|..
T Consensus 5 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~ 32 (132)
T 3lte_A 5 QSKRILVVDDDQAMAAAI---ERVLKRDHWQ 32 (132)
T ss_dssp --CEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCccEEEEECCHHHHHHH---HHHHHHCCcE
Confidence 467899999855544444 4455667764
No 89
>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A
Probab=36.03 E-value=54 Score=26.73 Aligned_cols=32 Identities=16% Similarity=0.233 Sum_probs=27.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+||+++|+ .+|++-++++..|.+.|++.|.+
T Consensus 125 l~~k~vlVl----GaGG~g~aia~~L~~~G~~~v~i 156 (283)
T 3jyo_A 125 AKLDSVVQV----GAGGVGNAVAYALVTHGVQKLQV 156 (283)
T ss_dssp CCCSEEEEE----CCSHHHHHHHHHHHHTTCSEEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEE
Confidence 489999986 57999999999999999976644
No 90
>1efp_B ETF, protein (electron transfer flavoprotein); electron transport, glutaric acidemia type II; HET: FAD AMP; 2.60A {Paracoccus denitrificans} SCOP: c.26.2.3
Probab=33.61 E-value=61 Score=26.01 Aligned_cols=42 Identities=14% Similarity=0.112 Sum_probs=30.2
Q ss_pred HHHHHHHHHHhhcCCcEEEEecC----CccchHHHHHHHhCCCeEE
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEA----RGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~----gG~~~A~~lA~~L~~p~~~ 113 (211)
..++.++..+++.++|+|++... .|-.++..+|..||.|.+.
T Consensus 100 ~~a~~La~~i~~~~~dlVl~G~~s~d~~~~~v~p~lA~~L~~~~vt 145 (252)
T 1efp_B 100 AVAKILAAVARAEGTELIIAGKQAIDNDMNATGQMLAAILGWAQAT 145 (252)
T ss_dssp HHHHHHHHHHHHHTCSEEEEESCCTTTCCCCHHHHHHHHHTCEEEE
T ss_pred HHHHHHHHHHHhcCCCEEEEcCCccCCchhhHHHHHHHHhCCCccc
Confidence 34555555555557898887663 3457999999999999854
No 91
>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*
Probab=33.39 E-value=60 Score=26.44 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=26.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+||+++|+ .+|+.-.+++..|.+.|++.|.+
T Consensus 124 l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v 155 (281)
T 3o8q_A 124 LKGATILLI----GAGGAARGVLKPLLDQQPASITV 155 (281)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTCCSEEEE
T ss_pred ccCCEEEEE----CchHHHHHHHHHHHhcCCCeEEE
Confidence 489999976 57999999999999999866644
No 92
>2j48_A Two-component sensor kinase; pseudo-receiver, circadian clock, transferase, response regulator, histidine protein kinase; NMR {Synechococcus elongatus}
Probab=33.26 E-value=88 Score=19.92 Aligned_cols=27 Identities=11% Similarity=0.239 Sum_probs=16.2
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
+++||||||=-..... ..+.|++.|..
T Consensus 1 ~~~iliv~~~~~~~~~---l~~~l~~~g~~ 27 (119)
T 2j48_A 1 AGHILLLEEEDEAATV---VCEMLTAAGFK 27 (119)
T ss_dssp CCEEEEECCCHHHHHH---HHHHHHHTTCE
T ss_pred CCEEEEEeCCHHHHHH---HHHHHHhCCcE
Confidence 4678888886544443 34445566654
No 93
>3ia7_A CALG4; glycosysltransferase, calicheamicin, enediyne, transf; 1.91A {Micromonospora echinospora}
Probab=32.78 E-value=98 Score=25.26 Aligned_cols=41 Identities=17% Similarity=0.093 Sum_probs=28.1
Q ss_pred HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 73 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 73 ~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
+...+.+.++++++|+|+. +......+..+|+.+|+|++..
T Consensus 90 ~~~~l~~~l~~~~pD~Vi~-d~~~~~~~~~aA~~~giP~v~~ 130 (402)
T 3ia7_A 90 ILRAAEEALGDNPPDLVVY-DVFPFIAGRLLAARWDRPAVRL 130 (402)
T ss_dssp HHHHHHHHHTTCCCSEEEE-ESTTHHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchHHHHHHHHHHhhCCCEEEE
Confidence 3455556666678999987 3122335677889999998764
No 94
>3otg_A CALG1; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD; 2.08A {Micromonospora echinospora} PDB: 3oth_A*
Probab=32.39 E-value=90 Score=25.70 Aligned_cols=39 Identities=13% Similarity=-0.072 Sum_probs=27.1
Q ss_pred HHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 74 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 74 ~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
...+.+.+++.++|+|++-. ....+...|+.+++|++..
T Consensus 119 ~~~l~~~l~~~~pDvVv~~~--~~~~~~~aa~~~giP~v~~ 157 (412)
T 3otg_A 119 FDELQPVIERLRPDLVVQEI--SNYGAGLAALKAGIPTICH 157 (412)
T ss_dssp HHHHHHHHHHHCCSEEEEET--TCHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEECc--hhhHHHHHHHHcCCCEEEe
Confidence 34555666667899998863 3334667788999998663
No 95
>3t6k_A Response regulator receiver; flavodoxin-like, structural genomics, joint center for struc genomics, JCSG, protein structure initiative; HET: MSE; 1.86A {Chloroflexus aurantiacus} SCOP: c.23.1.0
Probab=32.29 E-value=91 Score=21.14 Aligned_cols=29 Identities=28% Similarity=0.289 Sum_probs=18.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+..+||||||=-.....+ ...|++.|..+
T Consensus 3 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~v 31 (136)
T 3t6k_A 3 KPHTLLIVDDDDTVAEML---ELVLRGAGYEV 31 (136)
T ss_dssp CCCEEEEECSCHHHHHHH---HHHHHHTTCEE
T ss_pred CCCEEEEEeCCHHHHHHH---HHHHHHCCCEE
Confidence 346899999965554444 44556677643
No 96
>1tq1_A AT5G66040, senescence-associated family protein; CESG, structural genomics, protein structure initiative; NMR {Arabidopsis thaliana} SCOP: c.46.1.3
Probab=31.58 E-value=29 Score=24.41 Aligned_cols=33 Identities=21% Similarity=0.131 Sum_probs=26.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+++.|+++.+ +|.....++..|++.|.+.|+.
T Consensus 80 ~~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~~ 112 (129)
T 1tq1_A 80 GQSDNIIVGCQ---SGGRSIKATTDLLHAGFTGVKD 112 (129)
T ss_dssp CTTSSEEEEES---SCSHHHHHHHHHHHHHCCSEEE
T ss_pred CCCCeEEEECC---CCcHHHHHHHHHHHcCCCCeEE
Confidence 46788888865 6888889999999999876543
No 97
>3gt7_A Sensor protein; structural genomics, signal receiver domain, kinase, PSI-2, protein structure initiative; 2.30A {Syntrophus aciditrophicus SB}
Probab=30.95 E-value=84 Score=21.90 Aligned_cols=28 Identities=18% Similarity=0.312 Sum_probs=18.0
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++.+||||||=-..... ..+.|++.|..
T Consensus 6 ~~~~ILivdd~~~~~~~---l~~~L~~~g~~ 33 (154)
T 3gt7_A 6 RAGEILIVEDSPTQAEH---LKHILEETGYQ 33 (154)
T ss_dssp -CCEEEEECSCHHHHHH---HHHHHHTTTCE
T ss_pred CCCcEEEEeCCHHHHHH---HHHHHHHCCCE
Confidence 45789999996554444 44556677764
No 98
>2hhg_A Hypothetical protein RPA3614; MCSG, structural genomics, rohopseudom palustris, PSI-2, protein structure initiative; 1.20A {Rhodopseudomonas palustris}
Probab=30.42 E-value=51 Score=23.11 Aligned_cols=32 Identities=16% Similarity=0.168 Sum_probs=25.8
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+++.|++.++ +|.....++..|++.|.+.|+
T Consensus 84 ~~~~~ivvyC~---~G~rs~~a~~~L~~~G~~~v~ 115 (139)
T 2hhg_A 84 QEDKKFVFYCA---GGLRSALAAKTAQDMGLKPVA 115 (139)
T ss_dssp GSSSEEEEECS---SSHHHHHHHHHHHHHTCCSEE
T ss_pred CCCCeEEEECC---CChHHHHHHHHHHHcCCCCeE
Confidence 46889999875 577778899999999987654
No 99
>3rsc_A CALG2; TDP, enediyne, structural genomics, PSI-2, protein structure initiative, center for eukaryotic structural genomics; HET: TYD C0T; 2.19A {Micromonospora echinospora} PDB: 3iaa_A*
Probab=30.31 E-value=98 Score=25.59 Aligned_cols=42 Identities=14% Similarity=0.044 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEee
Q 028297 73 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPLR 115 (211)
Q Consensus 73 ~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~~ 115 (211)
+...+.+.++++++|+|+. +..-...+..+|+.+|+|++...
T Consensus 106 ~~~~l~~~l~~~~PDlVi~-d~~~~~~~~~aA~~~giP~v~~~ 147 (415)
T 3rsc_A 106 VLRATAEALDGDVPDLVLY-DDFPFIAGQLLAARWRRPAVRLS 147 (415)
T ss_dssp HHHHHHHHHSSSCCSEEEE-ESTTHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHhccCCCEEEE-CchhhhHHHHHHHHhCCCEEEEE
Confidence 3455556666678999994 42222346677889999987643
No 100
>4fzr_A SSFS6; structural genomics, PSI-biology, protein structure initiati enzyme discovery for natural product biosynthesis, natPro; 2.40A {Streptomyces SP} PDB: 4g2t_A*
Probab=30.20 E-value=1.3e+02 Score=24.74 Aligned_cols=41 Identities=15% Similarity=0.102 Sum_probs=27.1
Q ss_pred HHHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
.+...+.+.++++++|+|++-. ....+..+|..+++|++..
T Consensus 110 ~~~~~l~~~~~~~~pDlVv~d~--~~~~~~~~a~~~giP~v~~ 150 (398)
T 4fzr_A 110 RMRDEALALAERWKPDLVLTET--YSLTGPLVAATLGIPWIEQ 150 (398)
T ss_dssp HHHHHHHHHHHHHCCSEEEEET--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHhCCCCEEEECc--cccHHHHHHHhhCCCEEEe
Confidence 3344455556667899998643 2234677788899998653
No 101
>2k0z_A Uncharacterized protein HP1203; A/B domain, structural genomics, unknown function, PSI-2, PR structure initiative; NMR {Helicobacter pylori}
Probab=29.93 E-value=62 Score=21.83 Aligned_cols=30 Identities=13% Similarity=0.203 Sum_probs=25.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
.+++.|+++. .+|.....++..|++.|.+.
T Consensus 54 ~~~~~ivvyC---~~G~rs~~aa~~L~~~G~~~ 83 (110)
T 2k0z_A 54 HKDKKVLLHC---RAGRRALDAAKSMHELGYTP 83 (110)
T ss_dssp CSSSCEEEEC---SSSHHHHHHHHHHHHTTCCC
T ss_pred CCCCEEEEEe---CCCchHHHHHHHHHHCCCCE
Confidence 4678888887 57888888999999999875
No 102
>3h1g_A Chemotaxis protein CHEY homolog; sulfate-bound CHEY, cytoplasm, flagellar rotatio magnesium, metal-binding, phosphoprotein; 1.70A {Helicobacter pylori} SCOP: c.23.1.1 PDB: 3gwg_A 3h1e_A 3h1f_A
Probab=29.59 E-value=63 Score=21.67 Aligned_cols=28 Identities=29% Similarity=0.386 Sum_probs=17.3
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
.+.+||||||=-.....+ .+.|++.|..
T Consensus 4 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~ 31 (129)
T 3h1g_A 4 GSMKLLVVDDSSTMRRII---KNTLSRLGYE 31 (129)
T ss_dssp --CCEEEECSCHHHHHHH---HHHHHHTTCC
T ss_pred CCcEEEEEeCCHHHHHHH---HHHHHHcCCc
Confidence 346899999965544444 4556677765
No 103
>2fsx_A RV0390, COG0607: rhodanese-related sulfurtransferase; RV0390 BR SAD DATA with FBAR, structural genomics, PSI; 1.80A {Mycobacterium tuberculosis}
Probab=29.20 E-value=34 Score=24.58 Aligned_cols=32 Identities=9% Similarity=0.116 Sum_probs=23.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+++.|++.+. +|.....++..|++.|.+.|+
T Consensus 78 ~~~~~ivvyC~---~G~rS~~aa~~L~~~G~~~v~ 109 (148)
T 2fsx_A 78 QHERPVIFLCR---SGNRSIGAAEVATEAGITPAY 109 (148)
T ss_dssp ---CCEEEECS---SSSTHHHHHHHHHHTTCCSEE
T ss_pred CCCCEEEEEcC---CChhHHHHHHHHHHcCCcceE
Confidence 46788888864 677777899999999987554
No 104
>3hdv_A Response regulator; PSI-II, structural genomics, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 2.09A {Pseudomonas putida} SCOP: c.23.1.0
Probab=29.17 E-value=95 Score=20.79 Aligned_cols=29 Identities=24% Similarity=0.345 Sum_probs=18.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+..+||||||=-.....+ .+.|++.|...
T Consensus 6 ~~~~ilivdd~~~~~~~l---~~~L~~~g~~v 34 (136)
T 3hdv_A 6 ARPLVLVVDDNAVNREAL---ILYLKSRGIDA 34 (136)
T ss_dssp -CCEEEEECSCHHHHHHH---HHHHHHTTCCE
T ss_pred CCCeEEEECCCHHHHHHH---HHHHHHcCceE
Confidence 457999999965554444 45566677654
No 105
>3grc_A Sensor protein, kinase; protein structure initiative II(PSI II), NYSGXRC, 11025B, structural genomics; 2.21A {Polaromonas SP}
Probab=28.92 E-value=1.1e+02 Score=20.55 Aligned_cols=28 Identities=25% Similarity=0.310 Sum_probs=18.7
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
+..+||||||=-..... ..+.|++.|..
T Consensus 5 ~~~~iLivdd~~~~~~~---l~~~l~~~g~~ 32 (140)
T 3grc_A 5 PRPRILICEDDPDIARL---LNLMLEKGGFD 32 (140)
T ss_dssp CCSEEEEECSCHHHHHH---HHHHHHHTTCE
T ss_pred CCCCEEEEcCCHHHHHH---HHHHHHHCCCe
Confidence 45799999996555444 44556677765
No 106
>3gge_A PDZ domain-containing protein GIPC2; structural genomics, structural genomics consort protein binding; 2.60A {Homo sapiens}
Probab=28.73 E-value=83 Score=21.38 Aligned_cols=44 Identities=14% Similarity=0.080 Sum_probs=35.1
Q ss_pred CCcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEe
Q 028297 143 GAIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVG 186 (211)
Q Consensus 143 ~~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~ 186 (211)
+.+..|..++=|++.-..|-|-.+++++|++.-......+.+++
T Consensus 45 g~L~vGD~I~~VNG~~v~g~~h~evv~lLk~~~~g~~~~L~lv~ 88 (95)
T 3gge_A 45 KTICVGDHIESINGENIVGWRHYDVAKKLKELKKEELFTMKLIE 88 (95)
T ss_dssp TTCCTTCEEEEETTEECTTCCHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred CCCCCCCEEEEECCEEccCCCHHHHHHHHHhCCCCCEEEEEEEC
Confidence 34568999999999999999999999999997554444445544
No 107
>4dad_A Putative pilus assembly-related protein; response regulator receiver domain, CHEY-related protein, ST genomics; 2.50A {Burkholderia pseudomallei} PDB: 4dn6_A
Probab=28.73 E-value=71 Score=21.84 Aligned_cols=31 Identities=23% Similarity=0.185 Sum_probs=20.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCC-CeEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMG-AEVV 179 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G-a~~V 179 (211)
.++.+||||||=-.....+ .+.|.+.| ...+
T Consensus 18 ~~~~~ilivdd~~~~~~~l---~~~L~~~g~~~v~ 49 (146)
T 4dad_A 18 QGMINILVASEDASRLAHL---ARLVGDAGRYRVT 49 (146)
T ss_dssp GGGCEEEEECSCHHHHHHH---HHHHHHHCSCEEE
T ss_pred CCCCeEEEEeCCHHHHHHH---HHHHhhCCCeEEE
Confidence 3678999999966554444 45566777 5443
No 108
>3m6m_D Sensory/regulatory protein RPFC; RPFF, REC, enoyl-COA hydratase, lyase-transferase COMP; 2.50A {Xanthomonas campestris PV}
Probab=28.70 E-value=79 Score=21.77 Aligned_cols=29 Identities=45% Similarity=0.499 Sum_probs=15.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
++.+||||||=-.....+ .+.|.+.|..+
T Consensus 13 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~v 41 (143)
T 3m6m_D 13 RSMRMLVADDHEANRMVL---QRLLEKAGHKV 41 (143)
T ss_dssp --CEEEEECSSHHHHHHH---HHHHHC--CEE
T ss_pred ccceEEEEeCCHHHHHHH---HHHHHHcCCeE
Confidence 567899999965544443 44556666543
No 109
>2b4a_A BH3024; flavodoxin-like fold, structural genomics, joint center for structural genomics, JCSG, protein structure initiative; 2.42A {Bacillus halodurans} SCOP: c.23.1.1
Probab=28.52 E-value=1.2e+02 Score=20.42 Aligned_cols=29 Identities=21% Similarity=0.272 Sum_probs=19.4
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
.++.+||||||=-.....+. +.|++.|..
T Consensus 13 ~~~~~ilivdd~~~~~~~l~---~~L~~~g~~ 41 (138)
T 2b4a_A 13 MQPFRVTLVEDEPSHATLIQ---YHLNQLGAE 41 (138)
T ss_dssp -CCCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCCeEEEECCCHHHHHHHH---HHHHHcCCE
Confidence 47889999999765555444 455666754
No 110
>1vee_A Proline-rich protein family; hypothetical protein, structural genomics, rhodanese domain, riken structural genomics/proteomics initiative; NMR {Arabidopsis thaliana} PDB: 2dcq_A
Probab=28.39 E-value=33 Score=24.25 Aligned_cols=31 Identities=10% Similarity=0.075 Sum_probs=24.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+++.|+++ +.+|..-..++..|+++|.+.|+
T Consensus 73 ~~~~ivv~---C~sG~RS~~aa~~L~~~G~~~v~ 103 (134)
T 1vee_A 73 ENTTLYIL---DKFDGNSELVAELVALNGFKSAY 103 (134)
T ss_dssp GGCEEEEE---CSSSTTHHHHHHHHHHHTCSEEE
T ss_pred CCCEEEEE---eCCCCcHHHHHHHHHHcCCcceE
Confidence 57788885 56888778899999999987654
No 111
>1i16_A Interleukin 16, LCF; cytokine, lymphocyte chemoattractant factor, PDZ domain; NMR {Homo sapiens} SCOP: b.36.1.2
Probab=28.25 E-value=61 Score=22.80 Aligned_cols=40 Identities=18% Similarity=0.260 Sum_probs=33.5
Q ss_pred CcCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEE
Q 028297 144 AIEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183 (211)
Q Consensus 144 ~~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~ 183 (211)
.+..|..|+=|++.-.++.|...+.++|+..+...+...+
T Consensus 75 gL~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l~v 114 (130)
T 1i16_A 75 TVQPGDEILQLGGTAMQGLTRFEAWNIIKALPDGPVTIVI 114 (130)
T ss_dssp CCCTTCCEEECSSCBGGGSCHHHHHHHHHTSCSSEEEEEE
T ss_pred CCCCCCEEEEECCEECCCCCHHHHHHHHHhCCCceEEEEE
Confidence 5678999999999999999999999999998766554433
No 112
>1wv9_A Rhodanese homolog TT1651; CDC25, phosphatase, sulfurtransferase, structural genomics, NPPSFA; 2.00A {Thermus thermophilus}
Probab=27.87 E-value=84 Score=20.36 Aligned_cols=30 Identities=23% Similarity=0.149 Sum_probs=24.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+ +.|++.+ .+|.....++..|++.|.+ ++
T Consensus 52 ~~-~~ivvyC---~~g~rs~~a~~~L~~~G~~-v~ 81 (94)
T 1wv9_A 52 PR-RPLLLVC---EKGLLSQVAALYLEAEGYE-AM 81 (94)
T ss_dssp CS-SCEEEEC---SSSHHHHHHHHHHHHHTCC-EE
T ss_pred CC-CCEEEEc---CCCChHHHHHHHHHHcCCc-EE
Confidence 45 8888886 4688888899999999987 44
No 113
>2ayx_A Sensor kinase protein RCSC; two independent structural domains, transferase; NMR {Escherichia coli} SCOP: c.23.1.1 c.23.1.6 PDB: 2ayz_A 2ayy_A
Probab=27.81 E-value=42 Score=26.27 Aligned_cols=32 Identities=19% Similarity=0.107 Sum_probs=22.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
..|++||||||--+... ...+.|...|.++..
T Consensus 9 l~~~~vlvv~d~~~~~~---~l~~~L~~~g~~v~~ 40 (254)
T 2ayx_A 9 LSGKRCWLAVRNASLCQ---FLETSLQRSGIVVTT 40 (254)
T ss_dssp TTTEEEEEECCCHHHHH---HHHHHHTTTTEEEEE
T ss_pred cCCCEEEEEcCCHHHHH---HHHHHHHHCCCEEEE
Confidence 58999999999655444 445567778876543
No 114
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=27.71 E-value=1.4e+02 Score=24.60 Aligned_cols=34 Identities=26% Similarity=0.276 Sum_probs=23.0
Q ss_pred HHHhhcCCcEEEEecCCccc--hHHHHHHHhCCCeEEe
Q 028297 79 DRYRDMGISVVAGIEARGFV--FGPSIALAIGAKFVPL 114 (211)
Q Consensus 79 ~~i~~~~~d~Iv~i~~gG~~--~A~~lA~~L~~p~~~~ 114 (211)
..+++.++|+|++. +|+. .+...|..+++|++..
T Consensus 86 ~~l~~~~PDvVi~~--g~~~s~p~~laA~~~~iP~vih 121 (365)
T 3s2u_A 86 RVIRQLRPVCVLGL--GGYVTGPGGLAARLNGVPLVIH 121 (365)
T ss_dssp HHHHHHCCSEEEEC--SSSTHHHHHHHHHHTTCCEEEE
T ss_pred HHHHhcCCCEEEEc--CCcchHHHHHHHHHcCCCEEEE
Confidence 44666789999885 3442 3445577889998753
No 115
>2yjn_A ERYCIII, glycosyltransferase; transferase, cytochrome P450; 3.09A {Saccharopolyspora erythraea}
Probab=27.67 E-value=1e+02 Score=26.05 Aligned_cols=38 Identities=18% Similarity=0.050 Sum_probs=26.9
Q ss_pred HHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 75 DIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 75 ~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
..+.+.+++.++|+|++-. ++..+..+|..+|+|++..
T Consensus 134 ~~l~~~~~~~~pDlVv~d~--~~~~~~~aA~~lgiP~v~~ 171 (441)
T 2yjn_A 134 EGMVSFCRKWRPDLVIWEP--LTFAAPIAAAVTGTPHARL 171 (441)
T ss_dssp HHHHHHHHHHCCSEEEECT--TCTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhcCCCEEEecC--cchhHHHHHHHcCCCEEEE
Confidence 3344445556899999754 3467788899999998664
No 116
>3hzh_A Chemotaxis response regulator (CHEY-3); phosphatase, complex, response regulator, receiver domain, two-component signal transduction; HET: BFD; 1.96A {Borrelia burgdorferi}
Probab=27.40 E-value=1.1e+02 Score=21.34 Aligned_cols=30 Identities=20% Similarity=0.327 Sum_probs=19.9
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeEE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V 179 (211)
...+||||||=-.. .....+.|++.|...+
T Consensus 35 ~~~~Ilivdd~~~~---~~~l~~~L~~~g~~v~ 64 (157)
T 3hzh_A 35 IPFNVLIVDDSVFT---VKQLTQIFTSEGFNII 64 (157)
T ss_dssp EECEEEEECSCHHH---HHHHHHHHHHTTCEEE
T ss_pred CceEEEEEeCCHHH---HHHHHHHHHhCCCeEE
Confidence 44699999995544 4444556677786654
No 117
>2p6p_A Glycosyl transferase; X-RAY-diffraction,urdamycina-biosynthesis; 1.88A {Streptomyces fradiae}
Probab=27.17 E-value=1.5e+02 Score=24.12 Aligned_cols=39 Identities=18% Similarity=0.218 Sum_probs=26.7
Q ss_pred HHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 74 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 74 ~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
...+.+.+++.++|+|++-.. ...+..+|+.+|+|++..
T Consensus 96 ~~~l~~~l~~~~pD~Vi~~~~--~~~~~~~a~~~giP~v~~ 134 (384)
T 2p6p_A 96 LPRMLDFSRAWRPDLIVGGTM--SYVAPLLALHLGVPHARQ 134 (384)
T ss_dssp HHHHHHHHHHHCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCcEEEECcc--hhhHHHHHHhcCCCEEEe
Confidence 344445556668999998543 345667889999998664
No 118
>1qxn_A SUD, sulfide dehydrogenase; polysulfide-sulfur transferase, homodimer; NMR {Wolinella succinogenes} SCOP: c.46.1.3
Probab=27.10 E-value=38 Score=24.10 Aligned_cols=33 Identities=18% Similarity=0.287 Sum_probs=25.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
+.+++.|++.. .+|.....++..|++.|.+.|+
T Consensus 79 l~~~~~ivvyC---~~G~rS~~aa~~L~~~G~~~v~ 111 (137)
T 1qxn_A 79 LDPEKPVVVFC---KTAARAALAGKTLREYGFKTIY 111 (137)
T ss_dssp CCTTSCEEEEC---CSSSCHHHHHHHHHHHTCSCEE
T ss_pred CCCCCeEEEEc---CCCcHHHHHHHHHHHcCCcceE
Confidence 34778888887 4677778899999999987654
No 119
>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}
Probab=26.63 E-value=67 Score=25.33 Aligned_cols=30 Identities=20% Similarity=0.330 Sum_probs=26.0
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V 179 (211)
.+||+|||| ..|......++.|.++||+++
T Consensus 29 L~gk~VLVV----GgG~va~~ka~~Ll~~GA~Vt 58 (223)
T 3dfz_A 29 LKGRSVLVV----GGGTIATRRIKGFLQEGAAIT 58 (223)
T ss_dssp CTTCCEEEE----CCSHHHHHHHHHHGGGCCCEE
T ss_pred cCCCEEEEE----CCCHHHHHHHHHHHHCCCEEE
Confidence 589999987 688999999999999999754
No 120
>1kyq_A Met8P, siroheme biosynthesis protein Met8; homodimer, oxidoreductase, lyase; HET: NAD; 2.20A {Saccharomyces cerevisiae} SCOP: c.2.1.11 e.37.1.1
Probab=26.51 E-value=84 Score=25.63 Aligned_cols=30 Identities=20% Similarity=0.211 Sum_probs=26.4
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVV 179 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V 179 (211)
.+|++|||| ..|..-...++.|.+.|++++
T Consensus 11 l~~k~VLVV----GgG~va~rka~~Ll~~Ga~Vt 40 (274)
T 1kyq_A 11 LKDKRILLI----GGGEVGLTRLYKLMPTGCKLT 40 (274)
T ss_dssp CTTCEEEEE----EESHHHHHHHHHHGGGTCEEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHhCCCEEE
Confidence 489999986 799999999999999999854
No 121
>3i42_A Response regulator receiver domain protein (CHEY- like); structural genomics, PSI-2, protein structure initiative; 2.15A {Methylobacillus flagellatus KT} SCOP: c.23.1.0
Probab=25.95 E-value=92 Score=20.56 Aligned_cols=26 Identities=35% Similarity=0.516 Sum_probs=15.8
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCC
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGA 176 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga 176 (211)
..+||||||=-.....+ .+.|++.|.
T Consensus 3 ~~~ilivdd~~~~~~~l---~~~L~~~g~ 28 (127)
T 3i42_A 3 LQQALIVEDYQAAAETF---KELLEMLGF 28 (127)
T ss_dssp CEEEEEECSCHHHHHHH---HHHHHHTTE
T ss_pred cceEEEEcCCHHHHHHH---HHHHHHcCC
Confidence 35788998855444443 445566665
No 122
>2iya_A OLEI, oleandomycin glycosyltransferase; carbohydrate, glycosylation, enzyme, macrolide; HET: UDP ZIO; 1.7A {Streptomyces antibioticus}
Probab=24.86 E-value=1.6e+02 Score=24.38 Aligned_cols=39 Identities=21% Similarity=0.137 Sum_probs=27.3
Q ss_pred HHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 74 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 74 ~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
.+.+.+.+++.++|+||+-.. ...+..+|+.+|+|.+.+
T Consensus 98 ~~~l~~~l~~~~pD~VI~d~~--~~~~~~~A~~lgIP~v~~ 136 (424)
T 2iya_A 98 LPQLEDAYADDRPDLIVYDIA--SWPAPVLGRKWDIPFVQL 136 (424)
T ss_dssp HHHHHHHTTTSCCSEEEEETT--CTHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhccCCCEEEEcCc--ccHHHHHHHhcCCCEEEE
Confidence 344445555568899998553 346788899999998764
No 123
>3flh_A Uncharacterized protein LP_1913; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; 2.00A {Lactobacillus plantarum} PDB: 3fnj_A 3i3u_A
Probab=24.81 E-value=75 Score=21.92 Aligned_cols=30 Identities=37% Similarity=0.478 Sum_probs=23.2
Q ss_pred cCCCCEEEEEeccccchHH--HHHHHHHHHhCCCe
Q 028297 145 IEPGERALVIDDLVATGGT--LSAAVRLLERMGAE 177 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~T--l~~a~~~L~~~Ga~ 177 (211)
+.+++.|+++.. +|.. ...++..|++.|.+
T Consensus 68 l~~~~~ivvyC~---~g~r~~s~~a~~~L~~~G~~ 99 (124)
T 3flh_A 68 LDPAKTYVVYDW---TGGTTLGKTALLVLLSAGFE 99 (124)
T ss_dssp SCTTSEEEEECS---SSSCSHHHHHHHHHHHHTCE
T ss_pred CCCCCeEEEEeC---CCCchHHHHHHHHHHHcCCe
Confidence 457888998864 5655 57788999999985
No 124
>3d1p_A Putative thiosulfate sulfurtransferase YOR285W; atomic structure, atomic resolution structure, PSI, MCSG; HET: MSE; 0.98A {Saccharomyces cerevisiae}
Probab=24.70 E-value=68 Score=22.52 Aligned_cols=32 Identities=9% Similarity=0.117 Sum_probs=25.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+++.|++... +|.....++..|++.|.+.|+
T Consensus 89 ~~~~~ivvyC~---~G~rs~~aa~~L~~~G~~~v~ 120 (139)
T 3d1p_A 89 DSAKELIFYCA---SGKRGGEAQKVASSHGYSNTS 120 (139)
T ss_dssp CTTSEEEEECS---SSHHHHHHHHHHHTTTCCSEE
T ss_pred CCCCeEEEECC---CCchHHHHHHHHHHcCCCCeE
Confidence 46788888864 588888999999999987543
No 125
>3ih5_A Electron transfer flavoprotein alpha-subunit; alpha-beta-alpha sandwich, structural genomics, PSI-2, protein structure initiative; 2.60A {Bacteroides thetaiotaomicron}
Probab=24.64 E-value=77 Score=24.75 Aligned_cols=42 Identities=14% Similarity=0.248 Sum_probs=30.1
Q ss_pred HHHHHHHHHHhhcCCcEEEEecC-CccchHHHHHHHhCCCeEE
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEA-RGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~-gG~~~A~~lA~~L~~p~~~ 113 (211)
..++.++..+++.++++|+.... .|-.++..+|.+|+.|+..
T Consensus 78 ~~a~~l~~~i~~~~p~~Vl~g~t~~G~~laprlAa~L~~~~~s 120 (217)
T 3ih5_A 78 PHTSILVNLFKEEQPQICLMGATVIGRDLGPRVSSALTSGLTA 120 (217)
T ss_dssp HHHHHHHHHHHHHCCSEEEEECSHHHHHHHHHHHHHTTCCCBC
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCcchhhHHHHHHHHhCCCccc
Confidence 44555555566667888887763 5567899999999998743
No 126
>3fro_A GLGA glycogen synthase; glycosyltransferase family, UDP/ADP-glucose-glycogen synthas rossman folds, transferase; HET: NHF; 2.50A {Pyrococcus abyssi} SCOP: c.87.1.8 PDB: 2bis_A* 3l01_A*
Probab=24.34 E-value=2.7e+02 Score=22.57 Aligned_cols=31 Identities=16% Similarity=-0.118 Sum_probs=22.8
Q ss_pred hcCCcEEEEecCCccchHHHHHHHhCCCeEE
Q 028297 83 DMGISVVAGIEARGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 83 ~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~ 113 (211)
..++|+|.+-.......+..++...++|++.
T Consensus 120 ~~~~Dii~~~~~~~~~~~~~~~~~~~~~~v~ 150 (439)
T 3fro_A 120 EPLPDVVHFHDWHTVFAGALIKKYFKIPAVF 150 (439)
T ss_dssp SCCCSEEEEESGGGHHHHHHHHHHHCCCEEE
T ss_pred CCCCeEEEecchhhhhhHHHHhhccCCCEEE
Confidence 3478999988655555666777788999866
No 127
>3eul_A Possible nitrate/nitrite response transcriptional regulatory protein NARL (DNA-binding...; central beta strand flanked by alpha helices; 1.90A {Mycobacterium tuberculosis}
Probab=24.12 E-value=1.2e+02 Score=20.82 Aligned_cols=28 Identities=29% Similarity=0.195 Sum_probs=17.9
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCC
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGA 176 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga 176 (211)
.++.+||||||=-..... ..+.|.+.|.
T Consensus 13 ~~~~~iLivdd~~~~~~~---l~~~L~~~~~ 40 (152)
T 3eul_A 13 PEKVRVVVGDDHPLFREG---VVRALSLSGS 40 (152)
T ss_dssp -CCEEEEEECSSHHHHHH---HHHHHHHHSS
T ss_pred CceEEEEEEcCCHHHHHH---HHHHHhhCCC
Confidence 367899999995544443 4455666664
No 128
>2rjn_A Response regulator receiver:metal-dependent phosphohydrolase, HD subdomain; structural genomics, oceanospirillum SP. MED92; 2.10A {Neptuniibacter caesariensis}
Probab=23.91 E-value=1.4e+02 Score=20.50 Aligned_cols=28 Identities=25% Similarity=0.447 Sum_probs=18.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++.+||||||=-.....+ .+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~ 33 (154)
T 2rjn_A 6 KNYTVMLVDDEQPILNSL---KRLIKRLGCN 33 (154)
T ss_dssp SCCEEEEECSCHHHHHHH---HHHHHTTTCE
T ss_pred CCCeEEEEcCCHHHHHHH---HHHHHHcCCe
Confidence 567899999965554444 4455567764
No 129
>1wi4_A Synip, syntaxin binding protein 4; syntaxin4-interacting protein, STXBP4 protein, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: b.36.1.1
Probab=23.90 E-value=81 Score=21.36 Aligned_cols=31 Identities=19% Similarity=0.426 Sum_probs=28.9
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCC
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMG 175 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~G 175 (211)
+..|..|+=||+.-.++.|...+.++|+..+
T Consensus 60 l~~GD~Il~Vng~~~~~~~~~~~~~~l~~~~ 90 (109)
T 1wi4_A 60 LKPGDQLVSINKESMIGVSFEEAKSIITRAK 90 (109)
T ss_dssp CCTTCBEEEETTSCCTTCCHHHHHHHHHHSC
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHccc
Confidence 6789999999999999999999999999987
No 130
>1mvo_A PHOP response regulator; phosphate regulon, transcriptional regulatory protein, alpha/beta doubly wound fold, phosphorylation; 1.60A {Bacillus subtilis} SCOP: c.23.1.1
Probab=23.84 E-value=1.5e+02 Score=19.62 Aligned_cols=27 Identities=33% Similarity=0.383 Sum_probs=17.1
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
+++||||||=-.....+. ..|...|..
T Consensus 3 ~~~ilivdd~~~~~~~l~---~~L~~~g~~ 29 (136)
T 1mvo_A 3 NKKILVVDDEESIVTLLQ---YNLERSGYD 29 (136)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCEEEEEECCHHHHHHHH---HHHHHCCcE
Confidence 468999998655544443 455566654
No 131
>3lua_A Response regulator receiver protein; two-component signal transduction system, histidine kinase, phosphorelay, receiver domain, nysgxrc; 2.40A {Clostridium thermocellum}
Probab=23.69 E-value=1.6e+02 Score=19.68 Aligned_cols=29 Identities=10% Similarity=0.062 Sum_probs=19.1
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHh-CCCeE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLER-MGAEV 178 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~-~Ga~~ 178 (211)
...+||||||=-.....+. +.|++ .|.++
T Consensus 3 ~~~~ilivdd~~~~~~~l~---~~L~~~~~~~v 32 (140)
T 3lua_A 3 LDGTVLLIDYFEYEREKTK---IIFDNIGEYDF 32 (140)
T ss_dssp CCCEEEEECSCHHHHHHHH---HHHHHHCCCEE
T ss_pred CCCeEEEEeCCHHHHHHHH---HHHHhccCccE
Confidence 3569999999665555444 55566 67653
No 132
>3dzc_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, in diseases, isomerase, center for structural genomics of INFE diseases, csgid; 2.35A {Vibrio cholerae}
Probab=23.61 E-value=1.5e+02 Score=24.85 Aligned_cols=44 Identities=9% Similarity=-0.126 Sum_probs=30.3
Q ss_pred HHHHHHHHHHHhhcCCcEEEEecCCccchH-HHHHHHhCCCeEEe
Q 028297 71 KDTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 114 (211)
Q Consensus 71 ~~~~~~la~~i~~~~~d~Iv~i~~gG~~~A-~~lA~~L~~p~~~~ 114 (211)
..+...+.+.+.+.++|+|+........++ ...|..+++|++.+
T Consensus 97 ~~~~~~l~~~l~~~kPDvVi~~g~~~~~~~~~~aa~~~~IPv~h~ 141 (396)
T 3dzc_A 97 SKILLGMQQVLSSEQPDVVLVHGDTATTFAASLAAYYQQIPVGHV 141 (396)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEETTSHHHHHHHHHHHTTTCCEEEE
T ss_pred HHHHHHHHHHHHhcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 344555666677779999999875555444 45667789998654
No 133
>2hcu_A 3-isopropylmalate dehydratase small subunit; beta barrel, lyase; 2.10A {Streptococcus mutans}
Probab=23.55 E-value=41 Score=26.60 Aligned_cols=42 Identities=17% Similarity=0.204 Sum_probs=35.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEEEEeCc
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAEVVECACVVGLP 188 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~~~~~~ 188 (211)
++..||+.-+-+.+|+|=..|...++..|.+.|.+-...+.+
T Consensus 84 ~~~~IlvaG~NfGcGSSREhA~~al~~~Gi~aVIA~SFArIF 125 (213)
T 2hcu_A 84 REASILITGDNFGAGSSREHAAWALADYGFKVIVAGSFGDIH 125 (213)
T ss_dssp TTCCEEEECSSBTCSSCCHHHHHHHHHHTCCEEEESCBCHHH
T ss_pred cCCcEEEecCCCCCCCCHHHHHHHHHHhCCcEEEEchHHHHH
Confidence 467999999999999999999999999999877655554443
No 134
>2vdc_G Glutamate synthase [NADPH] small chain; oxidoreductase, amidotransferase, ammonia assimilation, iron, zymogen; HET: OMT FMN AKG FAD; 9.50A {Azospirillum brasilense}
Probab=23.53 E-value=1e+02 Score=26.70 Aligned_cols=34 Identities=32% Similarity=0.510 Sum_probs=28.2
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVECAC 183 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v~~ 183 (211)
..||+|+|| ..|.|-..++..+...|++.|.++.
T Consensus 262 ~~gk~VvVI----GgG~~a~d~A~~~~r~Ga~~Vtiv~ 295 (456)
T 2vdc_G 262 AAGKHVVVL----GGGDTAMDCVRTAIRQGATSVKCLY 295 (456)
T ss_dssp CCCSEEEEE----CSSHHHHHHHHHHHHTTCSEEEEEC
T ss_pred cCCCEEEEE----CCChhHHHHHHHHHHcCCCEEEEEE
Confidence 479999986 7899999999999999998766553
No 135
>1nu0_A Hypothetical protein YQGF; structural genomics, structure 2 function project, S2F, unknown function; 1.60A {Escherichia coli} SCOP: c.55.3.8 PDB: 1nmn_A 1ovq_A
Probab=23.44 E-value=1.8e+02 Score=20.95 Aligned_cols=41 Identities=12% Similarity=0.173 Sum_probs=25.3
Q ss_pred HHHHHhhcCCc-EEEEecC--Cc---------cchHHHHHHHhCCCeEEeecC
Q 028297 77 FVDRYRDMGIS-VVAGIEA--RG---------FVFGPSIALAIGAKFVPLRKP 117 (211)
Q Consensus 77 la~~i~~~~~d-~Iv~i~~--gG---------~~~A~~lA~~L~~p~~~~~k~ 117 (211)
+.+.+.+++++ +|||.|. .| -.++..|...+++|+....-+
T Consensus 45 l~~li~e~~v~~iVvGlP~~mdGt~~~~~~~~~~f~~~L~~~~~lpV~~~DER 97 (138)
T 1nu0_A 45 IERLLKEWQPDEIIVGLPLNMDGTEQPLTARARKFANRIHGRFGVEVKLHDER 97 (138)
T ss_dssp HHHHHHHHCCSEEEEEEEECTTSCBCHHHHHHHHHHHHHHHHHCCCEEEEEEE
T ss_pred HHHHHHHcCCCEEEEecccCCCcCcCHHHHHHHHHHHHHHHHhCCCEEEEcCC
Confidence 33344455554 7888873 33 246777777778898776543
No 136
>3kto_A Response regulator receiver protein; PSI-II,structural genomics, protein structure initiative; 1.98A {Pseudoalteromonas atlantica T6C} SCOP: c.23.1.0
Probab=23.35 E-value=1.1e+02 Score=20.65 Aligned_cols=28 Identities=11% Similarity=0.190 Sum_probs=18.0
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
..+||||||=-..... ..+.|++.|..+
T Consensus 6 ~~~ilivdd~~~~~~~---l~~~L~~~g~~v 33 (136)
T 3kto_A 6 HPIIYLVDHQKDARAA---LSKLLSPLDVTI 33 (136)
T ss_dssp -CEEEEECSCHHHHHH---HHHHHTTSSSEE
T ss_pred CCeEEEEcCCHHHHHH---HHHHHHHCCcEE
Confidence 4699999996555444 445566777643
No 137
>3cg4_A Response regulator receiver domain protein (CHEY-; structural genomics, unknown function; HET: MSE; 1.61A {Methanospirillum hungatei jf-1}
Probab=23.30 E-value=1.6e+02 Score=19.60 Aligned_cols=28 Identities=14% Similarity=0.195 Sum_probs=17.5
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
+..+||||||=-.....+ .+.|++.|..
T Consensus 6 ~~~~iLivdd~~~~~~~l---~~~L~~~g~~ 33 (142)
T 3cg4_A 6 HKGDVMIVDDDAHVRIAV---KTILSDAGFH 33 (142)
T ss_dssp CCCEEEEECSCHHHHHHH---HHHHHHTTCE
T ss_pred CCCeEEEEcCCHHHHHHH---HHHHHHCCeE
Confidence 467899999865444444 4455566654
No 138
>3nhv_A BH2092 protein; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.50A {Bacillus halodurans} PDB: 3o3w_A
Probab=23.11 E-value=1.5e+02 Score=21.09 Aligned_cols=30 Identities=7% Similarity=0.014 Sum_probs=23.4
Q ss_pred cCCCCEEEEEeccccch--HHHHHHHHHHHhCCCe
Q 028297 145 IEPGERALVIDDLVATG--GTLSAAVRLLERMGAE 177 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG--~Tl~~a~~~L~~~Ga~ 177 (211)
+.+++.|++.++ +| .....++..|++.|.+
T Consensus 69 l~~~~~ivvyC~---~g~~~rs~~aa~~L~~~G~~ 100 (144)
T 3nhv_A 69 LSKEKVIITYCW---GPACNGATKAAAKFAQLGFR 100 (144)
T ss_dssp CCTTSEEEEECS---CTTCCHHHHHHHHHHHTTCE
T ss_pred CCCCCeEEEEEC---CCCccHHHHHHHHHHHCCCe
Confidence 347889999865 56 4667788999999984
No 139
>3hv2_A Response regulator/HD domain protein; PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.50A {Pseudomonas fluorescens pf-5}
Probab=22.95 E-value=1.2e+02 Score=20.87 Aligned_cols=29 Identities=14% Similarity=0.087 Sum_probs=18.6
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
.+..+||||||=-... ....+.|++.|..
T Consensus 12 ~~~~~ILivdd~~~~~---~~l~~~L~~~g~~ 40 (153)
T 3hv2_A 12 TRRPEILLVDSQEVIL---QRLQQLLSPLPYT 40 (153)
T ss_dssp CSCCEEEEECSCHHHH---HHHHHHHTTSSCE
T ss_pred cCCceEEEECCCHHHH---HHHHHHhcccCcE
Confidence 3567999999965443 3444556666754
No 140
>1tmy_A CHEY protein, TMY; chemotaxis, phosphoryl transfer, signal transduction; 1.90A {Thermotoga maritima} SCOP: c.23.1.1 PDB: 2tmy_A 3tmy_A 4tmy_A 1u0s_Y
Probab=22.88 E-value=1.2e+02 Score=19.63 Aligned_cols=28 Identities=32% Similarity=0.546 Sum_probs=17.6
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+.+||||||=-.....+. +.|++.|...
T Consensus 2 ~~~ilivdd~~~~~~~l~---~~l~~~g~~v 29 (120)
T 1tmy_A 2 GKRVLIVDDAAFMRMMLK---DIITKAGYEV 29 (120)
T ss_dssp CCEEEEECSCHHHHHHHH---HHHHHTTCEE
T ss_pred CceEEEEcCcHHHHHHHH---HHHhhcCcEE
Confidence 458999998655544444 4455667654
No 141
>3snk_A Response regulator CHEY-like protein; P-loop containing nucleoside triphosphate hydrolases, struct genomics; 2.02A {Mesorhizobium loti}
Probab=22.81 E-value=1.1e+02 Score=20.49 Aligned_cols=26 Identities=4% Similarity=0.010 Sum_probs=17.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCC
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMG 175 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~G 175 (211)
...+||||||=-..... ..+.|++.|
T Consensus 13 ~~~~ilivdd~~~~~~~---l~~~L~~~g 38 (135)
T 3snk_A 13 KRKQVALFSSDPNFKRD---VATRLDALA 38 (135)
T ss_dssp CCEEEEEECSCHHHHHH---HHHHHHHTS
T ss_pred CCcEEEEEcCCHHHHHH---HHHHHhhcC
Confidence 45699999996555444 445666777
No 142
>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*
Probab=22.68 E-value=47 Score=27.08 Aligned_cols=32 Identities=13% Similarity=0.191 Sum_probs=26.7
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+||+++|+ .+|++-.+++..|.+.|++.|.+
T Consensus 115 l~~k~vlvl----GaGg~g~aia~~L~~~G~~~v~v 146 (277)
T 3don_A 115 IEDAYILIL----GAGGASKGIANELYKIVRPTLTV 146 (277)
T ss_dssp GGGCCEEEE----CCSHHHHHHHHHHHTTCCSCCEE
T ss_pred cCCCEEEEE----CCcHHHHHHHHHHHHCCCCEEEE
Confidence 478999975 68999999999999999865543
No 143
>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}
Probab=22.36 E-value=1.2e+02 Score=24.60 Aligned_cols=32 Identities=31% Similarity=0.361 Sum_probs=26.3
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
.+|++|+|+ .+|+.-.+++..|.+.|++.|.+
T Consensus 139 l~~~~vlVl----GaGg~g~aia~~L~~~G~~~V~v 170 (297)
T 2egg_A 139 LDGKRILVI----GAGGGARGIYFSLLSTAAERIDM 170 (297)
T ss_dssp CTTCEEEEE----CCSHHHHHHHHHHHTTTCSEEEE
T ss_pred CCCCEEEEE----CcHHHHHHHHHHHHHCCCCEEEE
Confidence 478999975 67999999999999999865543
No 144
>2a9o_A Response regulator; essential protein, YYCF/YYCG homolog, signaling protein; 1.65A {Streptococcus pneumoniae} SCOP: c.23.1.1 PDB: 1nxo_A 1nxs_A 1nxv_A 1nxw_A 1nxx_A 1nxp_A 2a9p_A 2a9q_A 1nxt_A* 2a9r_A*
Probab=22.28 E-value=1.6e+02 Score=18.83 Aligned_cols=26 Identities=19% Similarity=0.334 Sum_probs=16.3
Q ss_pred CEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 149 ERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 149 k~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++||||||=-.....+. ..|...|..
T Consensus 2 ~~ilivdd~~~~~~~l~---~~l~~~~~~ 27 (120)
T 2a9o_A 2 KKILIVDDEKPISDIIK---FNMTKEGYE 27 (120)
T ss_dssp CEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred ceEEEEcCCHHHHHHHH---HHHHhcCcE
Confidence 47899998655544443 455566754
No 145
>2d92_A INAD-like protein; PDZ domain, inadl protein, hinadl, PALS1- associated tight junction protein, protein associated to tight junctions, PATJ; NMR {Homo sapiens}
Probab=22.27 E-value=1.7e+02 Score=19.46 Aligned_cols=37 Identities=22% Similarity=0.461 Sum_probs=31.5
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEEE
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGAEVVEC 181 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~v 181 (211)
+..|..|+=|++.-.++.|...+.++|+..+...+..
T Consensus 63 L~~GD~Il~Vng~~v~~~~~~~~~~~l~~~~~~~v~l 99 (108)
T 2d92_A 63 LLPGDRLVSVNEYCLDNTSLAEAVEILKAVPPGLVHL 99 (108)
T ss_dssp CCTTCEEEEESSCBCTTCCHHHHHHHHHHSCSEEEEE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCCCeEEE
Confidence 6789999999999999999999999999976555443
No 146
>3ot5_A UDP-N-acetylglucosamine 2-epimerase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta; HET: PGE; 2.20A {Listeria monocytogenes}
Probab=22.25 E-value=1.5e+02 Score=24.94 Aligned_cols=43 Identities=5% Similarity=-0.109 Sum_probs=30.6
Q ss_pred HHHHHHHHHHhhcCCcEEEEecCCccchH-HHHHHHhCCCeEEe
Q 028297 72 DTVDIFVDRYRDMGISVVAGIEARGFVFG-PSIALAIGAKFVPL 114 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~~gG~~~A-~~lA~~L~~p~~~~ 114 (211)
.+...+.+.+++.++|+|+........++ ...|..+++|++.+
T Consensus 101 ~~~~~l~~~l~~~kPD~Vi~~gd~~~~l~~~laA~~~~IPv~h~ 144 (403)
T 3ot5_A 101 RVMNGINEVIAAENPDIVLVHGDTTTSFAAGLATFYQQKMLGHV 144 (403)
T ss_dssp HHHHHHHHHHHHHCCSEEEEETTCHHHHHHHHHHHHTTCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEECCchhHHHHHHHHHHhCCCEEEE
Confidence 45555666677779999999876555553 56677889997653
No 147
>2iyf_A OLED, oleandomycin glycosyltransferase; antibiotic resistance, glycosylation, enzyme, macrolide, carbohydrate; HET: ERY UDP; 1.7A {Streptomyces antibioticus}
Probab=22.25 E-value=2.1e+02 Score=23.61 Aligned_cols=40 Identities=20% Similarity=0.096 Sum_probs=27.7
Q ss_pred HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 73 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 73 ~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
....+.+.+++.++|+|++-.. + ..+..+|+.+++|.+..
T Consensus 92 ~~~~l~~~l~~~~pD~Vi~d~~-~-~~~~~~A~~~giP~v~~ 131 (430)
T 2iyf_A 92 ALPQLADAYADDIPDLVLHDIT-S-YPARVLARRWGVPAVSL 131 (430)
T ss_dssp HHHHHHHHHTTSCCSEEEEETT-C-HHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHhhccCCCEEEECCc-c-HHHHHHHHHcCCCEEEE
Confidence 3444555566668999996432 3 36778899999998664
No 148
>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*
Probab=22.00 E-value=1.2e+02 Score=24.54 Aligned_cols=28 Identities=29% Similarity=0.407 Sum_probs=24.0
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
||+++|+ .+|++-++++..|.+.| ..|.
T Consensus 118 ~k~vlvl----GaGGaaraia~~L~~~G-~~v~ 145 (269)
T 3phh_A 118 YQNALIL----GAGGSAKALACELKKQG-LQVS 145 (269)
T ss_dssp CCEEEEE----CCSHHHHHHHHHHHHTT-CEEE
T ss_pred CCEEEEE----CCCHHHHHHHHHHHHCC-CEEE
Confidence 8899975 68999999999999999 5543
No 149
>3kyj_B CHEY6 protein, putative histidine protein kinase; protein-protein interaction, histidine kinase, response regulator, phosphorylation; 1.40A {Rhodobacter sphaeroides} PDB: 3kyi_B*
Probab=21.77 E-value=97 Score=21.11 Aligned_cols=28 Identities=7% Similarity=0.140 Sum_probs=17.4
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhC-CCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERM-GAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~-Ga~ 177 (211)
++.+||||||=-.... ...+.|++. |..
T Consensus 12 ~~~~vlivdd~~~~~~---~l~~~L~~~~~~~ 40 (145)
T 3kyj_B 12 SPYNVMIVDDAAMMRL---YIASFIKTLPDFK 40 (145)
T ss_dssp CSEEEEEECSCHHHHH---HHHHHHTTCTTEE
T ss_pred CCCeEEEEcCCHHHHH---HHHHHHHhCCCce
Confidence 5678999999654443 344555565 433
No 150
>5nul_A Flavodoxin; electron transport, flavoprotein, FMN; HET: FMN; 1.60A {Clostridium beijerinckii} SCOP: c.23.5.1 PDB: 2flv_A* 2fvx_A* 1fld_A* 3nll_A* 1fvx_A* 1fla_A* 4nll_A* 5nll_A* 2fox_A* 5ull_A* 2fdx_A* 2fax_A* 6nul_A* 1fln_A* 4nul_A*
Probab=21.76 E-value=1.2e+02 Score=20.93 Aligned_cols=43 Identities=19% Similarity=0.162 Sum_probs=29.2
Q ss_pred CCCCEEEEEeccccc-hHHHHHHHHHHHhCCCeEEE-EEEEEeCc
Q 028297 146 EPGERALVIDDLVAT-GGTLSAAVRLLERMGAEVVE-CACVVGLP 188 (211)
Q Consensus 146 ~~gk~VLIVDDiitT-G~Tl~~a~~~L~~~Ga~~V~-v~~~~~~~ 188 (211)
.+||++.++-=--.. |.++....+.|++.|++.++ .+.+...+
T Consensus 77 l~~k~~~~f~t~g~~~~~a~~~l~~~l~~~G~~~v~~~~~~~~~p 121 (138)
T 5nul_A 77 ISGKKVALFGSYGWGDGKWMRDFEERMNGYGCVVVETPLIVQNEP 121 (138)
T ss_dssp CTTCEEEEEEEESSSCSHHHHHHHHHHHHTTCEECSCCEEEESSC
T ss_pred cCCCEEEEEEecCCCCChHHHHHHHHHHHCCCEEECCceEEecCC
Confidence 467777776532222 68899999999999999885 33333343
No 151
>3rqi_A Response regulator protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PHD CIT; 1.70A {Burkholderia pseudomallei}
Probab=21.70 E-value=1.6e+02 Score=21.24 Aligned_cols=28 Identities=46% Similarity=0.519 Sum_probs=18.6
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
.+.+||||||=-.....+. ..|.+.|..
T Consensus 6 ~~~~iLivdd~~~~~~~l~---~~L~~~g~~ 33 (184)
T 3rqi_A 6 SDKNFLVIDDNEVFAGTLA---RGLERRGYA 33 (184)
T ss_dssp -CCEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCeEEEEcCCHHHHHHHH---HHHHHCCCE
Confidence 5679999999765555444 455667754
No 152
>2eg4_A Probable thiosulfate sulfurtransferase; structural genomics, NPPSFA, national Pro protein structural and functional analyses; 1.70A {Thermus thermophilus} PDB: 2eg3_A
Probab=21.68 E-value=1.3e+02 Score=23.11 Aligned_cols=31 Identities=23% Similarity=0.371 Sum_probs=25.1
Q ss_pred CCCCEEEEEeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 146 EPGERALVIDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 146 ~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
.+++.|++. +.+|.+...++..|+++| ..+.
T Consensus 182 ~~~~~iv~~---C~~G~rs~~a~~~L~~~G-~~v~ 212 (230)
T 2eg4_A 182 QPGQEVGVY---CHSGARSAVAFFVLRSLG-VRAR 212 (230)
T ss_dssp CTTCEEEEE---CSSSHHHHHHHHHHHHTT-CEEE
T ss_pred CCCCCEEEE---cCChHHHHHHHHHHHHcC-CCcE
Confidence 467788776 468999999999999999 7654
No 153
>3oti_A CALG3; calicheamicin, TDP, structural genomics, PSI-2, protein STRU initiative, center for eukaryotic structural genomics, CESG fold; HET: TYD C0T; 1.60A {Micromonospora echinospora} PDB: 3d0q_A* 3d0r_A*
Probab=21.12 E-value=1.1e+02 Score=25.11 Aligned_cols=40 Identities=20% Similarity=-0.017 Sum_probs=26.8
Q ss_pred HHHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 73 TVDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 73 ~~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
+...+.+.++++++|+|++- .. ...+..+|+.+++|++..
T Consensus 118 ~~~~l~~~l~~~~pDlVv~d-~~-~~~~~~aA~~~giP~v~~ 157 (398)
T 3oti_A 118 LVDGTMALVDDYRPDLVVYE-QG-ATVGLLAADRAGVPAVQR 157 (398)
T ss_dssp GHHHHHHHHHHHCCSEEEEE-TT-CHHHHHHHHHHTCCEEEE
T ss_pred HHHHHHHHHHHcCCCEEEEC-ch-hhHHHHHHHHcCCCEEEE
Confidence 34455556666789999873 22 233667888999998653
No 154
>3i2v_A Adenylyltransferase and sulfurtransferase MOCS3; rhodanese, UBA4, structural genomics, ubiquitin biology, structural genomics consortium, SGC; 1.25A {Homo sapiens}
Probab=21.05 E-value=1.1e+02 Score=20.71 Aligned_cols=32 Identities=22% Similarity=0.233 Sum_probs=23.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhC------CCeEEEE
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERM------GAEVVEC 181 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~------Ga~~V~v 181 (211)
+++.|+++. .+|.....++..|++. |...|+.
T Consensus 71 ~~~~ivv~C---~~G~rs~~a~~~L~~~gg~~~~G~~~v~~ 108 (127)
T 3i2v_A 71 AAVPIYVIC---KLGNDSQKAVKILQSLSAAQELDPLTVRD 108 (127)
T ss_dssp CCEEEEEEC---SSSSHHHHHHHHHHHHHHTTSSSCEEEEE
T ss_pred CCCeEEEEc---CCCCcHHHHHHHHHHhhccccCCCceEEE
Confidence 345888886 4788888899999998 5665543
No 155
>3f6c_A Positive transcription regulator EVGA; structural genomics, PSI-2, protein structure initiative, PO transcription regulator EVGA; 1.45A {Escherichia coli k-12}
Probab=21.04 E-value=1.5e+02 Score=19.64 Aligned_cols=26 Identities=27% Similarity=0.304 Sum_probs=16.5
Q ss_pred EEEEEeccccchHHHHHHHHHHHhCCCeE
Q 028297 150 RALVIDDLVATGGTLSAAVRLLERMGAEV 178 (211)
Q Consensus 150 ~VLIVDDiitTG~Tl~~a~~~L~~~Ga~~ 178 (211)
+||||||=-..... ..+.|++.|...
T Consensus 3 ~ilivdd~~~~~~~---l~~~L~~~g~~v 28 (134)
T 3f6c_A 3 NAIIIDDHPLAIAA---IRNLLIKNDIEI 28 (134)
T ss_dssp EEEEECCCHHHHHH---HHHHHHHTTEEE
T ss_pred EEEEEcCCHHHHHH---HHHHHhhCCcEE
Confidence 78999986555444 445566777443
No 156
>3tsa_A SPNG, NDP-rhamnosyltransferase; glycosyltransferase; HET: GLC; 1.70A {Saccharopolyspora spinosa} PDB: 3uyk_A* 3uyl_A*
Probab=21.03 E-value=2.1e+02 Score=23.20 Aligned_cols=39 Identities=10% Similarity=-0.021 Sum_probs=26.3
Q ss_pred HHHHHHHHhhcCCcEEEEecCCccchHHHHHHHhCCCeEEe
Q 028297 74 VDIFVDRYRDMGISVVAGIEARGFVFGPSIALAIGAKFVPL 114 (211)
Q Consensus 74 ~~~la~~i~~~~~d~Iv~i~~gG~~~A~~lA~~L~~p~~~~ 114 (211)
...+.+.++++++|+|++-. -+ ..+...|..+|+|++..
T Consensus 103 ~~~l~~~l~~~~PD~Vv~~~-~~-~~~~~aa~~~giP~v~~ 141 (391)
T 3tsa_A 103 LPEYLRLAEAWRPSVLLVDV-CA-LIGRVLGGLLDLPVVLH 141 (391)
T ss_dssp HHHHHHHHHHHCCSEEEEET-TC-HHHHHHHHHTTCCEEEE
T ss_pred HHHHHHHHHhcCCCEEEeCc-ch-hHHHHHHHHhCCCEEEE
Confidence 44555666677899998853 22 33556778899998664
No 157
>3o46_A Maguk P55 subfamily member 7; PDZ domain, structural genomics consortium, SGC, protein BIN; 1.30A {Homo sapiens} SCOP: b.36.1.0
Probab=21.01 E-value=1.3e+02 Score=19.36 Aligned_cols=32 Identities=9% Similarity=0.213 Sum_probs=29.4
Q ss_pred cCCCCEEEEEeccccchHHHHHHHHHHHhCCC
Q 028297 145 IEPGERALVIDDLVATGGTLSAAVRLLERMGA 176 (211)
Q Consensus 145 ~~~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga 176 (211)
+..|..++=|++.-.+|.|...+.++|++.+.
T Consensus 47 L~~GD~I~~ing~~v~~~~~~~~~~~l~~~~~ 78 (93)
T 3o46_A 47 IHVGDELREVNGIPVEDKRPEEIIQILAQSQG 78 (93)
T ss_dssp CCTTCEEEEETTEESTTSCHHHHHHHHHHCCE
T ss_pred CCCCCEEEEECCEECCCCCHHHHHHHHHhCCC
Confidence 67899999999999999999999999999874
No 158
>1o63_A ATP phosphoribosyltransferase; structural genomics; 2.00A {Thermotoga maritima} SCOP: c.94.1.1 PDB: 1o64_A 1usy_E* 1usy_H*
Probab=21.00 E-value=27 Score=27.77 Aligned_cols=20 Identities=35% Similarity=0.533 Sum_probs=15.0
Q ss_pred EeccccchHHHHHHHHHHHhCCCeEEE
Q 028297 154 IDDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 154 VDDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
|=|++.||+||+ +.|-+.+.
T Consensus 146 IvDivsTG~TLr-------aNgL~~ie 165 (219)
T 1o63_A 146 IVDITETGRTLK-------ENNLEILD 165 (219)
T ss_dssp EEEEESSSHHHH-------HTTEEEEE
T ss_pred eEEeeccHHHHH-------HCCCEEee
Confidence 337999999986 67777664
No 159
>1jbe_A Chemotaxis protein CHEY; signaling protein; 1.08A {Escherichia coli} SCOP: c.23.1.1 PDB: 3chy_A 1a0o_A 1cey_A 1bdj_A 1eay_A 1f4v_A 1ffg_A 1ffs_A 1ffw_A 1fqw_A 2b1j_A 1chn_A 1djm_A 1kmi_Y* 1d4z_A 3olx_A 3olw_A 1cye_A 2che_A 2chf_A ...
Probab=20.96 E-value=1.3e+02 Score=19.73 Aligned_cols=26 Identities=27% Similarity=0.433 Sum_probs=15.9
Q ss_pred CCEEEEEeccccchHHHHHHHHHHHhCCC
Q 028297 148 GERALVIDDLVATGGTLSAAVRLLERMGA 176 (211)
Q Consensus 148 gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga 176 (211)
+.+||||||=-.....+. ..|++.|.
T Consensus 4 ~~~ilivdd~~~~~~~l~---~~l~~~~~ 29 (128)
T 1jbe_A 4 ELKFLVVDDFSTMRRIVR---NLLKELGF 29 (128)
T ss_dssp TCCEEEECSCHHHHHHHH---HHHHHTTC
T ss_pred ccEEEEECCCHHHHHHHH---HHHHHcCC
Confidence 457999998655544444 44555665
No 160
>3fet_A Electron transfer flavoprotein subunit alpha RELA protein; alpha-beta-alpha sandwich, structural genomics, PSI-2; HET: MSE; 2.05A {Thermoplasma acidophilum}
Probab=20.92 E-value=1.3e+02 Score=22.42 Aligned_cols=40 Identities=8% Similarity=-0.056 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhhcCCcEEEEec-CCccchHHHHHHHhCCCeEE
Q 028297 72 DTVDIFVDRYRDMGISVVAGIE-ARGFVFGPSIALAIGAKFVP 113 (211)
Q Consensus 72 ~~~~~la~~i~~~~~d~Iv~i~-~gG~~~A~~lA~~L~~p~~~ 113 (211)
..++.+++.++ ++|+|+... ..|-.++..+|.+|+.|+..
T Consensus 58 ~~a~~l~~~~~--~p~~Vl~g~t~~g~~vaprlAa~L~~~~~s 98 (166)
T 3fet_A 58 AVSEGILKIAG--NYDYIAIGSTEVGREIAGYLSFKTGFYTAT 98 (166)
T ss_dssp HHHHHHHHHHT--TCSEEEEECSHHHHHHHHHHHHHHCCCEEE
T ss_pred HHHHHHHHHHc--CCCEEEEcCCCccccHHHHHHHHhCCCcee
Confidence 45555655555 788877765 35567899999999999855
No 161
>1qkk_A DCTD, C4-dicarboxylate transport transcriptional regulatory protein; receiver domain, 2-component signal transduction; 1.7A {Sinorhizobium meliloti} SCOP: c.23.1.1 PDB: 1l5z_A 1l5y_A
Probab=20.77 E-value=1.7e+02 Score=20.05 Aligned_cols=28 Identities=21% Similarity=0.245 Sum_probs=17.8
Q ss_pred CCCEEEEEeccccchHHHHHHHHHHHhCCCe
Q 028297 147 PGERALVIDDLVATGGTLSAAVRLLERMGAE 177 (211)
Q Consensus 147 ~gk~VLIVDDiitTG~Tl~~a~~~L~~~Ga~ 177 (211)
++.+||||||=-.....+. +.|.+.|..
T Consensus 2 ~~~~ILivdd~~~~~~~l~---~~L~~~g~~ 29 (155)
T 1qkk_A 2 AAPSVFLIDDDRDLRKAMQ---QTLELAGFT 29 (155)
T ss_dssp --CEEEEECSCHHHHHHHH---HHHHHTTCE
T ss_pred CCCEEEEEeCCHHHHHHHH---HHHHHcCcE
Confidence 3568999998765555444 455567765
No 162
>1ve4_A ATP phosphoribosyltransferase; riken structural genomics/proteomics initiative structural genomics; 1.20A {Thermus thermophilus} SCOP: c.94.1.1
Probab=20.42 E-value=29 Score=27.36 Aligned_cols=19 Identities=47% Similarity=0.527 Sum_probs=15.1
Q ss_pred eccccchHHHHHHHHHHHhCCCeEEE
Q 028297 155 DDLVATGGTLSAAVRLLERMGAEVVE 180 (211)
Q Consensus 155 DDiitTG~Tl~~a~~~L~~~Ga~~V~ 180 (211)
=|++.||+||+ ++|-+.+.
T Consensus 152 vDivsTG~TLr-------aNgL~~ie 170 (206)
T 1ve4_A 152 VDVVQTGATLR-------AAGLVEVE 170 (206)
T ss_dssp EEEESSSHHHH-------HTTCEEEE
T ss_pred EEeccCHHHHH-------HCCCEEeE
Confidence 37999999975 77887765
Done!