BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028300
(211 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|225441147|ref|XP_002267276.1| PREDICTED: ras-related protein RABC2a [Vitis vinifera]
gi|297739985|emb|CBI30167.3| unnamed protein product [Vitis vinifera]
Length = 211
Score = 378 bits (971), Expect = e-103, Method: Compositional matrix adjust.
Identities = 184/201 (91%), Positives = 191/201 (95%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDS VGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGIILVYDVTRRE+FTNLSDVWAKEV+LYSTNQDCVKMLVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRESFTNLSDVWAKEVELYSTNQDCVKMLVGNKV 130
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
DR+SERVVSREEGIALAKEHG LF ECSAKTRENVE+CFE+LALKIMEVPSLLEEGS V
Sbjct: 131 DRESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 190
Query: 191 KRNILKQKPENQSPPIGGCCS 211
KRNILK KPENQ PP GGCCS
Sbjct: 191 KRNILKPKPENQPPPTGGCCS 211
>gi|18414255|ref|NP_568121.1| RAB GTPase-C2A [Arabidopsis thaliana]
gi|297810433|ref|XP_002873100.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75098916|sp|O49841.1|RAC2A_ARATH RecName: Full=Ras-related protein RABC2a; Short=AtRABC2a; AltName:
Full=Ras-related protein Rab18B; Short=AtRab18B
gi|2723477|dbj|BAA24074.1| GTP-binding protein [Arabidopsis thaliana]
gi|7378638|emb|CAB83314.1| AtRab GTP-binding protein [Arabidopsis thaliana]
gi|26453054|dbj|BAC43603.1| putative AtRab GTP-binding protein [Arabidopsis thaliana]
gi|29824251|gb|AAP04086.1| unknown protein [Arabidopsis thaliana]
gi|297318937|gb|EFH49359.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332003236|gb|AED90619.1| RAB GTPase-C2A [Arabidopsis thaliana]
Length = 210
Score = 369 bits (947), Expect = e-100, Method: Compositional matrix adjust.
Identities = 182/211 (86%), Positives = 196/211 (92%), Gaps = 1/211 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS YDLSFKILLIGDSGVGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GK
Sbjct: 1 MGSSSGQSG-YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNL DVW KE++LYSTNQ+
Sbjct: 60 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CV+MLVGNKVDR+SER VSREEGIALAKE +FLECSA+TR+NVEQCFE+LALKIMEVP
Sbjct: 120 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS+ VKRNILKQKPE+Q+ GCCS
Sbjct: 180 SLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>gi|224138818|ref|XP_002322909.1| predicted protein [Populus trichocarpa]
gi|222867539|gb|EEF04670.1| predicted protein [Populus trichocarpa]
Length = 208
Score = 367 bits (941), Expect = 2e-99, Method: Compositional matrix adjust.
Identities = 181/211 (85%), Positives = 194/211 (91%), Gaps = 3/211 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSG SYDLSFKILLIGDSGVGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GK
Sbjct: 1 MGSSSG---SYDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 57
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYR AQGIILVYDVTRRETFTNLSDVW KEV+L+STNQD
Sbjct: 58 RLKLTIWDTAGQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWGKEVELFSTNQD 117
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CVKMLVGNKVD++S R V+++EG+ALAK+HG LFLECSAKTRENVEQCFE+LALKIMEVP
Sbjct: 118 CVKMLVGNKVDKESGRDVTKDEGMALAKQHGCLFLECSAKTRENVEQCFEELALKIMEVP 177
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS VKRNILKQKPE+ GGCCS
Sbjct: 178 SLLEEGSTAVKRNILKQKPEHHVASNGGCCS 208
>gi|356533295|ref|XP_003535201.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 365 bits (936), Expect = 8e-99, Method: Compositional matrix adjust.
Identities = 178/212 (83%), Positives = 196/212 (92%), Gaps = 1/212 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSSGQS+ YDLSFKILLIGDS VGKSSLLVSFIS+S +D++PTIGVDFKIK+LTV GK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+TFTNLS+VW+KEV+LYSTNQ+
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVWSKEVELYSTNQN 120
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CVKMLVGNKVDRDSERVVS+EEG+ALA+E G LF ECSAKTRENVE+CFE+LALKIMEVP
Sbjct: 121 CVKMLVGNKVDRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVP 180
Query: 181 SLLEEGSNVVKRNILKQKPEN-QSPPIGGCCS 211
SLLEEGS VKRNILKQ+ E Q+ GGCCS
Sbjct: 181 SLLEEGSTAVKRNILKQQQEQPQASEFGGCCS 212
>gi|224069599|ref|XP_002326383.1| predicted protein [Populus trichocarpa]
gi|222833576|gb|EEE72053.1| predicted protein [Populus trichocarpa]
Length = 213
Score = 360 bits (925), Expect = 1e-97, Method: Compositional matrix adjust.
Identities = 177/203 (87%), Positives = 189/203 (93%), Gaps = 3/203 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDSGVGKSSLLVSFISSSV+D++PTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 12 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDIAPTIGVDFKIKQLTVGGKRLKLTIWDTA 71
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYR AQGIILVYDVTRRETFTNLSDVW KEVDLYSTNQDCVKMLVGNKV
Sbjct: 72 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWTKEVDLYSTNQDCVKMLVGNKV 131
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D+DSER V+R+EG++LAKEHG FLECSAKTR+NVEQCFE+LALKIMEVPSL+EEGS V
Sbjct: 132 DKDSERDVTRDEGMSLAKEHGCTFLECSAKTRQNVEQCFEELALKIMEVPSLMEEGSTAV 191
Query: 191 KRNILKQKPENQSPPI--GGCCS 211
KRNILKQKP +Q PP GGCCS
Sbjct: 192 KRNILKQKP-DQHPPSSGGGCCS 213
>gi|449440149|ref|XP_004137847.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449501036|ref|XP_004161260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC2a-like
[Cucumis sativus]
Length = 210
Score = 359 bits (922), Expect = 3e-97, Method: Compositional matrix adjust.
Identities = 177/210 (84%), Positives = 192/210 (91%), Gaps = 1/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS++YDLSFK+LLIGDSGVGKSSLL+SFIS++ D+L+PTIGVDFKIKLL V GK
Sbjct: 1 MGSSSGQSSNYDLSFKVLLIGDSGVGKSSLLLSFISTNADNLAPTIGVDFKIKLLKVGGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEV+LYSTN+D
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVELYSTNKD 120
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CVKML+GNKVDR+SER VSREEGIALAK GS FLECSAKTRENVE+CFE LALKIME P
Sbjct: 121 CVKMLIGNKVDRESERAVSREEGIALAKVLGSYFLECSAKTRENVEKCFEDLALKIMEAP 180
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SL+EEGS VVKRNILKQ+ E Q CC
Sbjct: 181 SLIEEGSTVVKRNILKQQ-EFQPASTTSCC 209
>gi|255556838|ref|XP_002519452.1| protein with unknown function [Ricinus communis]
gi|223541315|gb|EEF42866.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 359 bits (921), Expect = 5e-97, Method: Compositional matrix adjust.
Identities = 177/204 (86%), Positives = 186/204 (91%), Gaps = 3/204 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDSGVGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 13 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVDGKRLKLTIWDTA 72
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYR AQGIILVYDVTRRETFTNLSDVWAKEVDLY TN+DCVKMLVGNK+
Sbjct: 73 GQERFRTLTSSYYRNAQGIILVYDVTRRETFTNLSDVWAKEVDLYCTNKDCVKMLVGNKL 132
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D DSER VSREEG+ALAKEHG FLECSAKTRENVE+CFE+LALKIMEVPSLLEEGS V
Sbjct: 133 DIDSERAVSREEGMALAKEHGCAFLECSAKTRENVEKCFEELALKIMEVPSLLEEGSTAV 192
Query: 191 KRNILKQKPENQSPPI---GGCCS 211
K+ IL QK ENQ+PP GCCS
Sbjct: 193 KKKILNQKQENQAPPSRANTGCCS 216
>gi|1370172|emb|CAA98163.1| RAB1X [Lotus japonicus]
Length = 208
Score = 358 bits (920), Expect = 6e-97, Method: Compositional matrix adjust.
Identities = 177/211 (83%), Positives = 190/211 (90%), Gaps = 3/211 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSSG YDLSFKILLIGDSGVGKSSLLVSFISSSV+D SPTIGVDFKIK+LTV GK
Sbjct: 1 MSSSSG---GYDLSFKILLIGDSGVGKSSLLVSFISSSVEDQSPTIGVDFKIKMLTVGGK 57
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLT+WDTAGQERFRTLTSSYYRGAQGIILVYDVT+RETFTNLS+VW+KE++LYS NQD
Sbjct: 58 RLKLTLWDTAGQERFRTLTSSYYRGAQGIILVYDVTKRETFTNLSEVWSKELELYSNNQD 117
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CVKMLVGNKVDRD+ R VSREEG+ALAKE G L +ECSAKTRENVEQCFE+LALKIME P
Sbjct: 118 CVKMLVGNKVDRDAARAVSREEGLALAKELGCLLIECSAKTRENVEQCFEELALKIMEAP 177
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS VKRNILKQK E Q+ GGCCS
Sbjct: 178 SLLEEGSTAVKRNILKQKQEPQASQHGGCCS 208
>gi|356505277|ref|XP_003521418.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 353 bits (906), Expect = 2e-95, Method: Compositional matrix adjust.
Identities = 173/201 (86%), Positives = 185/201 (92%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDSGVGKSSLLVSFISSSV+DLSPTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTL SSYYR AQGIILVYDVTRRETFTNLS+VW+KEV+LYSTNQDCVK+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
DRD+ER VSREEG+ALAKE G L LECSAKTRENVEQCFE+LALKIME PSLLEEGS V
Sbjct: 131 DRDTERAVSREEGLALAKELGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEGSTAV 190
Query: 191 KRNILKQKPENQSPPIGGCCS 211
KR++LK K E+Q+ GGCCS
Sbjct: 191 KRSVLKPKQESQASQNGGCCS 211
>gi|356548355|ref|XP_003542568.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 211
Score = 353 bits (906), Expect = 3e-95, Method: Compositional matrix adjust.
Identities = 170/201 (84%), Positives = 187/201 (93%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDS VGKSSLLVSFIS+S +D++PTIGVDFKIK+LTV GKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGIILVYDVTRR+TFTNLS VW+KEV+LYSTNQ+CVKMLVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
DRDSERVVS+EEG+ALA+E G LF ECSAKTRENVE+CFE+LALKIMEVPSLLEEGS V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 191 KRNILKQKPENQSPPIGGCCS 211
KRNILKQ+ + Q+ GGCCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|255645626|gb|ACU23307.1| unknown [Glycine max]
Length = 211
Score = 350 bits (898), Expect = 2e-94, Method: Compositional matrix adjust.
Identities = 169/201 (84%), Positives = 186/201 (92%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDS VGKSSLLVSFIS+S + ++PTIGVDFKIK+LTV GKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSAVGKSSLLVSFISNSAEGIAPTIGVDFKIKMLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGIILVYDVTRR+TFTNLS VW+KEV+LYSTNQ+CVKMLVGNKV
Sbjct: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSLVWSKEVELYSTNQNCVKMLVGNKV 130
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
DRDSERVVS+EEG+ALA+E G LF ECSAKTRENVE+CFE+LALKIMEVPSLLEEGS V
Sbjct: 131 DRDSERVVSKEEGLALAEELGCLFFECSAKTRENVERCFEELALKIMEVPSLLEEGSTAV 190
Query: 191 KRNILKQKPENQSPPIGGCCS 211
KRNILKQ+ + Q+ GGCCS
Sbjct: 191 KRNILKQQQQPQASEFGGCCS 211
>gi|388503938|gb|AFK40035.1| unknown [Medicago truncatula]
Length = 214
Score = 348 bits (894), Expect = 6e-94, Method: Compositional matrix adjust.
Identities = 171/202 (84%), Positives = 186/202 (92%), Gaps = 1/202 (0%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFIS-SSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+DLSFKILLIGDSGVGKS LLV+FIS SSV+DLSPTIGVDFKIK+LTV GKRLKLTIWDT
Sbjct: 13 HDLSFKILLIGDSGVGKSCLLVTFISNSSVEDLSPTIGVDFKIKMLTVGGKRLKLTIWDT 72
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLS+VW+KE++LYSTNQ+CVKMLVGNK
Sbjct: 73 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELELYSTNQECVKMLVGNK 132
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
VD+DSER VSREEG++LAKE G L LECSAKTRENVE+CFE+LALKIME PSLLEEGS
Sbjct: 133 VDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELALKIMEAPSLLEEGSAA 192
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
KRN+LKQK E QS GGCCS
Sbjct: 193 TKRNVLKQKQEPQSSQNGGCCS 214
>gi|449441211|ref|XP_004138376.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449503760|ref|XP_004162163.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 208
Score = 339 bits (870), Expect = 4e-91, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 186/211 (88%), Gaps = 3/211 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGS S N LSFK+LLIGDS VGKSSLL +FIS+S+ DLSPTIGVDFKIK LTVAGK
Sbjct: 1 MGSPSPHLN---LSFKVLLIGDSAVGKSSLLHTFISASLHDLSPTIGVDFKIKQLTVAGK 57
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFR+LTSSYYRGAQGIILVYDVTRRETF NL DVWA EV+LY T+QD
Sbjct: 58 RLKLTIWDTAGQERFRSLTSSYYRGAQGIILVYDVTRRETFANLLDVWANEVELYLTDQD 117
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CVKMLVGNKVDR+SERVVSRE+GIALA + GSLF ECSAKTRENVE+CFE+LA+KIMEVP
Sbjct: 118 CVKMLVGNKVDRESERVVSREDGIALANKLGSLFFECSAKTRENVEKCFEELAIKIMEVP 177
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
S LEE S++VKRNIL+QK E Q+ GGCCS
Sbjct: 178 SFLEERSSLVKRNILRQKQEGQAQQSGGCCS 208
>gi|224113131|ref|XP_002316401.1| predicted protein [Populus trichocarpa]
gi|118482557|gb|ABK93199.1| unknown [Populus trichocarpa]
gi|222865441|gb|EEF02572.1| predicted protein [Populus trichocarpa]
Length = 212
Score = 332 bits (851), Expect = 6e-89, Method: Compositional matrix adjust.
Identities = 166/208 (79%), Positives = 184/208 (88%), Gaps = 1/208 (0%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
S G +NSYD SFKILLIGDSGVGKSSLL+SFIS+SV DLSPTIGVDFKIK+LT+ GKRLK
Sbjct: 6 SKGWNNSYDYSFKILLIGDSGVGKSSLLLSFISNSVRDLSPTIGVDFKIKVLTLGGKRLK 65
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
LTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETF NLSD+WA+EV+LY TNQ C+K
Sbjct: 66 LTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFENLSDIWAEEVELY-TNQKCIK 124
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNKVDRDSERVVSREEG+ALA+EH FLECSAKTRENV QCF++L LKI EVPSLL
Sbjct: 125 ILVGNKVDRDSERVVSREEGMALAQEHKCSFLECSAKTRENVLQCFKELTLKISEVPSLL 184
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCCS 211
E GS VV++ ILK+K Q+P GGCCS
Sbjct: 185 ENGSVVVRQQILKEKQVYQAPRGGGCCS 212
>gi|357114065|ref|XP_003558821.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 212
Score = 328 bits (842), Expect = 6e-88, Method: Compositional matrix adjust.
Identities = 162/212 (76%), Positives = 187/212 (88%), Gaps = 3/212 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVA 58
MG+S G S SYD SFKILLIGDS VGKSSLLVSF+S+S D+SPTIGVDFKIK LTV
Sbjct: 1 MGTSPGTS-SYDCSFKILLIGDSAVGKSSLLVSFVSASPTDHDISPTIGVDFKIKFLTVG 59
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
K+LKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+R++FTNL+DVWAKE++L+STN
Sbjct: 60 EKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 119
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
++CVKMLVGNKVD+D ER+V+REEG+A A+E G LFLE SAKTRENVE+CFE+LALKI+E
Sbjct: 120 KECVKMLVGNKVDKDEERMVTREEGLAFAQECGCLFLESSAKTRENVEKCFEELALKILE 179
Query: 179 VPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
VPSL EEGS+VVKRN LKQK EN + GGCC
Sbjct: 180 VPSLSEEGSSVVKRNSLKQKQENNAKHGGGCC 211
>gi|115450707|ref|NP_001048954.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|15451614|gb|AAK98738.1|AC090485_17 Putative GTP-binding protein [Oryza sativa Japonica Group]
gi|108706165|gb|ABF93960.1| Ras family protein, expressed [Oryza sativa Japonica Group]
gi|113547425|dbj|BAF10868.1| Os03g0146000 [Oryza sativa Japonica Group]
gi|125542397|gb|EAY88536.1| hypothetical protein OsI_10009 [Oryza sativa Indica Group]
gi|125584909|gb|EAZ25573.1| hypothetical protein OsJ_09398 [Oryza sativa Japonica Group]
gi|215692396|dbj|BAG87816.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 210
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 157/209 (75%), Positives = 188/209 (89%), Gaps = 3/209 (1%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKR 61
+S ++SYD SFKILLIGDS VGKSSLLVSF+S+S D+++PTIGVDFKIK LTV GK+
Sbjct: 2 ASSPASSYDCSFKILLIGDSAVGKSSLLVSFVSASHIDDEIAPTIGVDFKIKFLTVNGKK 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
LKLTIWDTAGQERFR +TSSYYRGA GIILVYDVT+RE+FTNL+DVWAKE++L+STN++C
Sbjct: 62 LKLTIWDTAGQERFRGITSSYYRGAHGIILVYDVTKRESFTNLADVWAKEIELHSTNKEC 121
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
+KMLVGNKVD++ ER+V+REEG+A A+E G LFLE SAKTRENVE+CFE+LALKI+EVPS
Sbjct: 122 IKMLVGNKVDKNEERMVTREEGLAFAQESGCLFLESSAKTRENVEKCFEELALKILEVPS 181
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
LLEEGS+VVKRN LKQK EN++ GGCC
Sbjct: 182 LLEEGSSVVKRNSLKQKHENKAKN-GGCC 209
>gi|255558462|ref|XP_002520256.1| protein phosphatase 2c, putative [Ricinus communis]
gi|223540475|gb|EEF42042.1| protein phosphatase 2c, putative [Ricinus communis]
Length = 571
Score = 325 bits (833), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 156/211 (73%), Positives = 182/211 (86%), Gaps = 2/211 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSS Q +D FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK+K +T+ GK
Sbjct: 1 MESSSSQPE-FDYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKHVTIGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SE VV+++EGI A+++G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 120 CIKMLVGNKVDKESEIVVTKKEGIEFARQYGCLFLECSAKTRVNVEQCFEELVLKILETP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLL EGS+ VKRNI KQKP Q P CC+
Sbjct: 180 SLLAEGSSGVKRNIFKQKPP-QDVPTSSCCT 209
>gi|359486861|ref|XP_002265762.2| PREDICTED: ras-related protein RABC2a-like [Vitis vinifera]
Length = 215
Score = 323 bits (827), Expect = 4e-86, Method: Compositional matrix adjust.
Identities = 161/211 (76%), Positives = 180/211 (85%), Gaps = 2/211 (0%)
Query: 1 MGSSS-GQS-NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVA 58
MGSSS G+ NSYD SFKILLIGDSGVGKSSLL+SFIS SV DLSPTIGVDFKI LLT+
Sbjct: 4 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 63
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKRLKLTIWDTAGQERF TLT+SYYRGA GIILVYDVTRRE+FTNL DVWAKEV+LYSTN
Sbjct: 64 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+C+K LVGNKVDRD ER V+REEG++LA+EH FLECSAKTRENV+QCF++L LKI++
Sbjct: 124 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 183
Query: 179 VPSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
VPSLLE+GS VV+R L QK Q P C
Sbjct: 184 VPSLLEQGSRVVERQTLMQKELYQESPRSCC 214
>gi|302142732|emb|CBI19935.3| unnamed protein product [Vitis vinifera]
Length = 307
Score = 322 bits (825), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 178/210 (84%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
+ SS +D FK+LLIGDSGVGKS+LL+SF S++ +DLSPTIGVDFK+K + + GK
Sbjct: 98 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGK 157
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+DLYSTNQD
Sbjct: 158 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 217
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SERVV+++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 218 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 277
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS+ V++NI KQKP GCC
Sbjct: 278 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 307
>gi|225457841|ref|XP_002267387.1| PREDICTED: ras-related protein RABC1 isoform 1 [Vitis vinifera]
gi|359492296|ref|XP_003634396.1| PREDICTED: ras-related protein RABC1 [Vitis vinifera]
Length = 211
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 149/210 (70%), Positives = 178/210 (84%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
+ SS +D FK+LLIGDSGVGKS+LL+SF S++ +DLSPTIGVDFK+K + + GK
Sbjct: 2 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLSFTSNTFEDLSPTIGVDFKVKHVNIGGK 61
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+DLYSTNQD
Sbjct: 62 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 121
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SERVV+++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 122 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 181
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS+ V++NI KQKP GCC
Sbjct: 182 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 211
>gi|296085951|emb|CBI31392.3| unnamed protein product [Vitis vinifera]
Length = 212
Score = 322 bits (825), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 161/211 (76%), Positives = 180/211 (85%), Gaps = 2/211 (0%)
Query: 1 MGSSS-GQS-NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVA 58
MGSSS G+ NSYD SFKILLIGDSGVGKSSLL+SFIS SV DLSPTIGVDFKI LLT+
Sbjct: 1 MGSSSLGRGKNSYDCSFKILLIGDSGVGKSSLLLSFISGSVHDLSPTIGVDFKIMLLTIG 60
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKRLKLTIWDTAGQERF TLT+SYYRGA GIILVYDVTRRE+FTNL DVWAKEV+LYSTN
Sbjct: 61 GKRLKLTIWDTAGQERFGTLTNSYYRGAHGIILVYDVTRRESFTNLLDVWAKEVELYSTN 120
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+C+K LVGNKVDRD ER V+REEG++LA+EH FLECSAKTRENV+QCF++L LKI++
Sbjct: 121 HECIKFLVGNKVDRDCERAVTREEGMSLAQEHKCSFLECSAKTRENVQQCFKELTLKILQ 180
Query: 179 VPSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
VPSLLE+GS VV+R L QK Q P C
Sbjct: 181 VPSLLEQGSRVVERQTLMQKELYQESPRSCC 211
>gi|242042233|ref|XP_002468511.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
gi|241922365|gb|EER95509.1| hypothetical protein SORBIDRAFT_01g047150 [Sorghum bicolor]
Length = 210
Score = 322 bits (824), Expect = 7e-86, Method: Compositional matrix adjust.
Identities = 154/209 (73%), Positives = 187/209 (89%), Gaps = 3/209 (1%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKR 61
+S ++SYD SFK+LLIGDS VGKSSLLVSF+S++ DD++PTIGVDFKIK L+V GK+
Sbjct: 2 ASSPASSYDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVGGKK 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
LKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+RE+FTNL++VW KE++L+STN++C
Sbjct: 62 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLAEVWTKEIELHSTNKEC 121
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
VKMLVGNKVD+D +R+V++EEG+A A+E G LF+E SAKTRENVE+CFE+LALKI+EVPS
Sbjct: 122 VKMLVGNKVDKDEDRMVTKEEGLAFAQECGCLFVESSAKTRENVEKCFEELALKILEVPS 181
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
LLEEGS+VVKRN LKQK EN S GGCC
Sbjct: 182 LLEEGSSVVKRNTLKQKQEN-SNQSGGCC 209
>gi|351723071|ref|NP_001236498.1| uncharacterized protein LOC100527726 [Glycine max]
gi|255633056|gb|ACU16883.1| unknown [Glycine max]
Length = 194
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 158/181 (87%), Positives = 168/181 (92%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDSGVGKSSLLVSFISSSV+DLSPTIGVDFKIK LTV GKRLKLTIWDTA
Sbjct: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLSPTIGVDFKIKTLTVGGKRLKLTIWDTA 70
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTL SSYYR AQGIILVYDVTRRETFTNLS+VW+KEV+LYSTNQDCVK+LVGNKV
Sbjct: 71 GQERFRTLNSSYYRKAQGIILVYDVTRRETFTNLSEVWSKEVELYSTNQDCVKILVGNKV 130
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
DRD+ER VSREEG+ALAK+ G L LECSAKTRENVEQCFE+LALKIME PSLLEE +
Sbjct: 131 DRDTERAVSREEGLALAKDLGCLLLECSAKTRENVEQCFEELALKIMEAPSLLEEDQQQL 190
Query: 191 K 191
K
Sbjct: 191 K 191
>gi|116781187|gb|ABK21996.1| unknown [Picea sitchensis]
gi|116784353|gb|ABK23312.1| unknown [Picea sitchensis]
Length = 208
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 179/210 (85%), Gaps = 2/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SS+ Q + +D FK+L+IGDSGVGKSSLL+ F S S DDLSPTIGVDFK+KL+T+AGK
Sbjct: 1 MASSTSQGD-FDHVFKLLMIGDSGVGKSSLLLRFTSDSFDDLSPTIGVDFKLKLMTIAGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGII VYDVTRRETFTNLS+VWAKEVDLYSTNQD
Sbjct: 60 RLKLTIWDTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFTNLSEVWAKEVDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVDR++ERVVS++EGIALA++ G LFLECSAKT NVE CFE+L LKI++ P
Sbjct: 120 CIKMLVGNKVDRETERVVSKKEGIALARQMGCLFLECSAKTHVNVENCFEELVLKILDTP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+LL++ + ++NI KQ N + G CC
Sbjct: 180 NLLQDSATAARKNIFKQNQANDANS-GSCC 208
>gi|449458101|ref|XP_004146786.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449458103|ref|XP_004146787.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
gi|449529576|ref|XP_004171774.1| PREDICTED: ras-related protein RABC1-like isoform 1 [Cucumis
sativus]
gi|449529578|ref|XP_004171775.1| PREDICTED: ras-related protein RABC1-like isoform 2 [Cucumis
sativus]
Length = 213
Score = 320 bits (821), Expect = 2e-85, Method: Compositional matrix adjust.
Identities = 150/209 (71%), Positives = 177/209 (84%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRL 62
+ S +D FK+LLIGDSGVGKS+LL+ F S S +DLSPTIGVDFKIK +TV GK+L
Sbjct: 4 APSSSQPEFDYLFKLLLIGDSGVGKSTLLLRFTSDSFEDLSPTIGVDFKIKHVTVGGKKL 63
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRTLT SYYRGAQGII+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+
Sbjct: 64 KLAIWDTAGQERFRTLTGSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCI 123
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
KMLVGNKVD++SERVVS++EGI A+E+G LFLECSAKTR NVEQCF++L LKI++ PSL
Sbjct: 124 KMLVGNKVDKESERVVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFDELVLKILDTPSL 183
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCCS 211
L +GS +K+NI K+KP + GGCCS
Sbjct: 184 LADGSTGLKKNIFKEKPPETTTSAGGCCS 212
>gi|242034275|ref|XP_002464532.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
gi|241918386|gb|EER91530.1| hypothetical protein SORBIDRAFT_01g020220 [Sorghum bicolor]
Length = 217
Score = 318 bits (816), Expect = 6e-85, Method: Compositional matrix adjust.
Identities = 155/203 (76%), Positives = 183/203 (90%), Gaps = 3/203 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VD-DLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
++ SFKILLIGDSGVGKSSLLVSF+++S +D D++PTIGVDFKIK LTV GK+LKLTIWD
Sbjct: 14 HECSFKILLIGDSGVGKSSLLVSFVAASNLDADIAPTIGVDFKIKFLTVGGKKLKLTIWD 73
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+TSSYYRGAQGIILVYDVT+RE+F+NLSDVW KE++ STN+DC+KMLVGN
Sbjct: 74 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLSDVWTKEIEANSTNKDCIKMLVGN 133
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG-S 187
KVD+D ER+V++EEG+A A+E G LFLE SAKTRENVEQCFE+LALKI+EVPSLLEEG S
Sbjct: 134 KVDKDDERMVTKEEGLAFAEESGCLFLESSAKTRENVEQCFEELALKILEVPSLLEEGSS 193
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+VVKRNILKQK E+ + GCC
Sbjct: 194 SVVKRNILKQKQESHAKNSSGCC 216
>gi|297852170|ref|XP_002893966.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
gi|297339808|gb|EFH70225.1| hypothetical protein ARALYDRAFT_473785 [Arabidopsis lyrata subsp.
lyrata]
Length = 212
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 152/199 (76%), Positives = 175/199 (87%), Gaps = 1/199 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQ +D FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK+K LT+ K
Sbjct: 1 MGSSSGQPE-FDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SER VS++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 120 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 179
Query: 181 SLLEEGSNVVKRNILKQKP 199
SL EGS+ K+NI KQ P
Sbjct: 180 SLTAEGSSGGKKNIFKQNP 198
>gi|357146466|ref|XP_003574002.1| PREDICTED: ras-related protein RABC2a-like [Brachypodium
distachyon]
Length = 217
Score = 318 bits (816), Expect = 7e-85, Method: Compositional matrix adjust.
Identities = 154/210 (73%), Positives = 183/210 (87%), Gaps = 3/210 (1%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKR 61
++G S++Y+ SFKILLIGDSGVGKSSLLVSF++++ DD++PTIGVDFKIK LTV GK+
Sbjct: 7 TAGGSSAYECSFKILLIGDSGVGKSSLLVSFVAAATLDDDITPTIGVDFKIKFLTVGGKK 66
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
LKLTIWDTAGQERFRT+T SYYRGAQGIILVYDV +RE+FTNL+DVW KE+D S+N+DC
Sbjct: 67 LKLTIWDTAGQERFRTITGSYYRGAQGIILVYDVAKRESFTNLADVWTKEIDSNSSNKDC 126
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
+KMLVGNKVD+D ER V+REEG+A A+E G LFLE SAKTRENVE CFEQL LKI+EVPS
Sbjct: 127 IKMLVGNKVDKDDERTVTREEGLAFAEESGCLFLESSAKTRENVENCFEQLTLKILEVPS 186
Query: 182 LLEEG-SNVVKRNILKQKPENQSPPIGGCC 210
LLEEG S+VVKRNILKQ+ E+ + G CC
Sbjct: 187 LLEEGCSSVVKRNILKQQQESHAKYGGRCC 216
>gi|15218575|ref|NP_175056.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|145324172|ref|NP_001077675.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|186488925|ref|NP_001117435.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|75097949|sp|O23657.1|RABC1_ARATH RecName: Full=Ras-related protein RABC1; Short=AtRABC1; AltName:
Full=Ras-related protein Rab18; Short=AtRab18
gi|7523663|gb|AAF63103.1|AC006423_4 AtRab18 [Arabidopsis thaliana]
gi|13878001|gb|AAK44078.1|AF370263_1 putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|2231312|gb|AAB61997.1| AtRab18 [Arabidopsis thaliana]
gi|17104731|gb|AAL34254.1| putative GTP-binding protein RAB1Y [Arabidopsis thaliana]
gi|21555736|gb|AAM63924.1| GTP-binding protein(RAB1Y), putative [Arabidopsis thaliana]
gi|110743628|dbj|BAE99651.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|332193882|gb|AEE32003.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193883|gb|AEE32004.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
gi|332193884|gb|AEE32005.1| Ras-related protein Rab-18 [Arabidopsis thaliana]
Length = 212
Score = 318 bits (815), Expect = 8e-85, Method: Compositional matrix adjust.
Identities = 152/199 (76%), Positives = 175/199 (87%), Gaps = 1/199 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQ +D FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK+K LT+ K
Sbjct: 1 MGSSSGQPE-FDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SER VS++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 120 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 179
Query: 181 SLLEEGSNVVKRNILKQKP 199
SL EGS+ K+NI KQ P
Sbjct: 180 SLTAEGSSGGKKNIFKQNP 198
>gi|255558460|ref|XP_002520255.1| protein with unknown function [Ricinus communis]
gi|223540474|gb|EEF42041.1| protein with unknown function [Ricinus communis]
Length = 208
Score = 318 bits (815), Expect = 9e-85, Method: Compositional matrix adjust.
Identities = 152/210 (72%), Positives = 181/210 (86%), Gaps = 2/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M S QS+ ++ FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK++ +T+ GK
Sbjct: 1 MELSPNQSD-FEYLFKLLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVQYVTIGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SERVVS++EGI A+++G LF+ECSAKTR NVEQCFE+L LKI+E P
Sbjct: 120 CIKMLVGNKVDKESERVVSKKEGIDFARQYGCLFIECSAKTRANVEQCFEELVLKILETP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS+ VK+NI KQKP Q CC
Sbjct: 180 SLLAEGSSGVKKNIFKQKPP-QDVATSSCC 208
>gi|357166898|ref|XP_003580906.1| PREDICTED: ras-related protein RABC1-like [Brachypodium distachyon]
Length = 215
Score = 318 bits (815), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 174/206 (84%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
+ Q +D FK+LLIGDSGVGKSSLL+ F + S +DLSPTIGVDFK+K++ +AGK+LKL
Sbjct: 10 TAQQPDFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVNIAGKKLKL 69
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KM
Sbjct: 70 AIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKM 129
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
LVGNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L LKI++ PSLL
Sbjct: 130 LVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLA 189
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
+ S+ K+NI KQK GGCC
Sbjct: 190 DASSGAKKNIFKQKAPEADAAAGGCC 215
>gi|223947433|gb|ACN27800.1| unknown [Zea mays]
gi|413957007|gb|AFW89656.1| hypothetical protein ZEAMMB73_805451 [Zea mays]
Length = 309
Score = 317 bits (813), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 152/213 (71%), Positives = 187/213 (87%), Gaps = 5/213 (2%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAG 59
G +S ++SYD SFK+LLIGDS VGKSSLLVSF+S++ DD++PTIGVDFKI L+V G
Sbjct: 97 GMASSPASSYDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKINFLSVGG 156
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K+LKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+RE+FTNL+DVW KE++L+STN+
Sbjct: 157 KKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNK 216
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
+C+KMLVGNKVD+D +R+V++EEG+A A+E G LF+E SAKTRENVE+CFE+LALKI++V
Sbjct: 217 ECIKMLVGNKVDKDEDRMVTKEEGLAFAQERGCLFVESSAKTRENVEKCFEELALKILQV 276
Query: 180 PSLLEEGSNVVKRN--ILKQKPENQSPPIGGCC 210
PSLLEEGS+VVKRN LKQK EN + GGCC
Sbjct: 277 PSLLEEGSSVVKRNTLTLKQKQENAN-RSGGCC 308
>gi|359806090|ref|NP_001241441.1| uncharacterized protein LOC100794330 [Glycine max]
gi|255645015|gb|ACU23007.1| unknown [Glycine max]
Length = 214
Score = 317 bits (811), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 147/201 (73%), Positives = 174/201 (86%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FK+LLIGDSGVGKS+LL+SF S + +DLSPTIGVDFK+K +T+ GK+LKL IWDTA
Sbjct: 13 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTIGGKKLKLAIWDTA 72
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLVGNKV
Sbjct: 73 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 132
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D++SERVVS++EGI A+E+G L+ ECSAKTR NV QCF++L +KI+E PSLL EGS+ V
Sbjct: 133 DKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVTQCFDELVMKILETPSLLAEGSSGV 192
Query: 191 KRNILKQKPENQSPPIGGCCS 211
K+NI KQKP GCCS
Sbjct: 193 KKNIFKQKPPLSDASSSGCCS 213
>gi|357519975|ref|XP_003630276.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|355524298|gb|AET04752.1| Ras-related protein Rab-18-B [Medicago truncatula]
gi|388503306|gb|AFK39719.1| unknown [Medicago truncatula]
Length = 208
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 148/210 (70%), Positives = 179/210 (85%), Gaps = 2/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSSGQ +D FK+L+IGDSGVGKSSLL+ F S DDLSPTIGVDFK+K +T+ GK
Sbjct: 1 MDSSSGQ-QEFDYMFKLLMIGDSGVGKSSLLLRFTSDDFDDLSPTIGVDFKVKYVTIEGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLS++WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++ +RVV+++EGI A+E+G LF+ECSAKTR NV+QCFE+L LK+++ P
Sbjct: 120 CMKMLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS VK+NI K KP++ + GCC
Sbjct: 180 SLLAEGSKGVKKNIFKDKPQSDASA-SGCC 208
>gi|351725909|ref|NP_001235829.1| uncharacterized protein LOC100499773 [Glycine max]
gi|255626443|gb|ACU13566.1| unknown [Glycine max]
Length = 215
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 146/201 (72%), Positives = 173/201 (86%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FK+LLIGDSGVGKS+LL+SF S + +DLSPTIGVDFK+K +T+ GK+ KL IWDTA
Sbjct: 14 FDYLFKLLLIGDSGVGKSTLLLSFTSDTFEDLSPTIGVDFKVKYVTMGGKKSKLAIWDTA 73
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLVGNKV
Sbjct: 74 GQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 133
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D++SERVVS++EGI A+E+G L+ ECSAKTR NV QCF++L +KI+E PSLL EGS+ V
Sbjct: 134 DKESERVVSKKEGIDFAREYGCLYTECSAKTRVNVAQCFDELVMKILETPSLLAEGSSGV 193
Query: 191 KRNILKQKPENQSPPIGGCCS 211
K+NI KQKP GCCS
Sbjct: 194 KKNIFKQKPPQSDASSSGCCS 214
>gi|224062966|ref|XP_002300952.1| predicted protein [Populus trichocarpa]
gi|222842678|gb|EEE80225.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 149/211 (70%), Positives = 178/211 (84%), Gaps = 1/211 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M S ++ FK+LLIGDSGVGKS+LL+SF S + +DLSPTIGVDFK+K +T+ GK
Sbjct: 1 MEVPSTSQQEFEYLFKLLLIGDSGVGKSTLLLSFTSKNFEDLSPTIGVDFKVKHVTIGGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLS++WAKE+DLYSTNQD
Sbjct: 61 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSEIWAKEIDLYSTNQD 120
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SERVV+++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 121 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 180
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLL EGS+ VK+N+ KQKP + CCS
Sbjct: 181 SLLAEGSSGVKKNVFKQKPP-EDVTTSSCCS 210
>gi|226503041|ref|NP_001149268.1| ras-related protein Rab-18 [Zea mays]
gi|195625924|gb|ACG34792.1| ras-related protein Rab-18 [Zea mays]
gi|223972897|gb|ACN30636.1| unknown [Zea mays]
gi|413920116|gb|AFW60048.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 315 bits (807), Expect = 9e-84, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 172/204 (84%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
Q +D FK+LLIGDSGVGKSSLL+ F + S +DLSPTIGVDFK+K++T+ GK+LKL I
Sbjct: 12 QQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAI 71
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLV
Sbjct: 72 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 131
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L LKI++ PSLL +
Sbjct: 132 GNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADA 191
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
S+ K+NI KQKP CC
Sbjct: 192 SSGAKKNIFKQKPPEADAAASSCC 215
>gi|226529379|ref|NP_001150695.1| ras-related protein Rab-18 [Zea mays]
gi|195641120|gb|ACG40028.1| ras-related protein Rab-18 [Zea mays]
Length = 212
Score = 315 bits (806), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 151/211 (71%), Positives = 186/211 (88%), Gaps = 5/211 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKR 61
+S ++SYD SFK+LLIGDS VGKSSLLVSF+S++ DD++PTIGVDFKIK L+V GK+
Sbjct: 2 ASSPASSYDCSFKVLLIGDSAVGKSSLLVSFVSAAHIDDDIAPTIGVDFKIKFLSVGGKK 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
LKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+RE+FTNL+DVW KE++L+STN++C
Sbjct: 62 LKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRESFTNLADVWTKEIELHSTNKEC 121
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
+KMLVGNKVD+D +R+V++EEG+ A+E G LF+E SAKTRENVE+CFE+LALKI++VPS
Sbjct: 122 IKMLVGNKVDKDEDRMVTKEEGLEFAQERGCLFVESSAKTRENVEKCFEELALKILQVPS 181
Query: 182 LLEEGSNVVKRN--ILKQKPENQSPPIGGCC 210
LLEEGS+VVKRN LKQK EN + GGCC
Sbjct: 182 LLEEGSSVVKRNTLTLKQKQENANRS-GGCC 211
>gi|226506700|ref|NP_001152280.1| ras-related protein Rab-18 [Zea mays]
gi|195654619|gb|ACG46777.1| ras-related protein Rab-18 [Zea mays]
gi|414871235|tpg|DAA49792.1| TPA: ras protein Rab-18 [Zea mays]
Length = 215
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 152/203 (74%), Positives = 180/203 (88%), Gaps = 3/203 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
++ SFKILLIGDSGVGKSSLLVSF+++S D++PTIGVDFKIK LTV GK+LKLTIWD
Sbjct: 12 HECSFKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWD 71
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+TSSYYRGAQGIILVYDVT+RE+F+NL+DVW KE++ STN+DC+KMLVGN
Sbjct: 72 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGN 131
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG-S 187
KVD+D ER+V+ EEG+A A+E G LFLE SAKTRENVE+CFE+LALKI+EVPSLLEEG S
Sbjct: 132 KVDKDDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSS 191
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+VVKRNILKQK E+ + GCC
Sbjct: 192 SVVKRNILKQKQESHAKNGSGCC 214
>gi|226502426|ref|NP_001150036.1| ras-related protein Rab-18 [Zea mays]
gi|226958554|ref|NP_001152900.1| uncharacterized protein LOC100272640 [Zea mays]
gi|194700036|gb|ACF84102.1| unknown [Zea mays]
gi|195636232|gb|ACG37584.1| ras-related protein Rab-18 [Zea mays]
gi|413934110|gb|AFW68661.1| Ras protein Rab-18 [Zea mays]
Length = 215
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 181/203 (89%), Gaps = 3/203 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
++ SFK LLIGDSGVGKSSLLVSF+++S D++PTIGVDFKIK LTV GK+LKLTIWD
Sbjct: 12 HECSFKFLLIGDSGVGKSSLLVSFVAASYLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWD 71
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+TSSYYRGAQGIILVYDVT+RE+F+NL+DVW KE++ STN+DC+KMLVGN
Sbjct: 72 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGN 131
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG-S 187
KVD+D ER+V++EEG+A A+E+G LFLE SAKTRENVE+CFE+LALKI+EVPSLLEEG S
Sbjct: 132 KVDKDDERMVTKEEGLAFAEEYGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSS 191
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+VVKRNILKQK E+ + GCC
Sbjct: 192 SVVKRNILKQKQESDAKNGSGCC 214
>gi|242077810|ref|XP_002448841.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
gi|241940024|gb|EES13169.1| hypothetical protein SORBIDRAFT_06g034200 [Sorghum bicolor]
Length = 215
Score = 313 bits (803), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 172/204 (84%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
Q +D FK+LLIGDSGVGKSSLL+ F + S +DLSPTIGVDFK+K++++ GK+LKL I
Sbjct: 12 QQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVSIGGKKLKLAI 71
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRTLTSSYYRGAQGII+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLV
Sbjct: 72 WDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 131
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L LKI++ PSLL +
Sbjct: 132 GNKVDKESERCVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADA 191
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
S+ K+NI KQKP CC
Sbjct: 192 SSGAKKNIFKQKPPEADAAASSCC 215
>gi|115482326|ref|NP_001064756.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|31432458|gb|AAP54088.1| Ras-related protein Rab-18, putative, expressed [Oryza sativa
Japonica Group]
gi|113639365|dbj|BAF26670.1| Os10g0456600 [Oryza sativa Japonica Group]
gi|125532213|gb|EAY78778.1| hypothetical protein OsI_33880 [Oryza sativa Indica Group]
gi|125575025|gb|EAZ16309.1| hypothetical protein OsJ_31770 [Oryza sativa Japonica Group]
gi|215736815|dbj|BAG95744.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 222
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 150/206 (72%), Positives = 184/206 (89%), Gaps = 6/206 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV-----DDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ SFKILLIGDSGVGKSSLLVSF+ ++ DD++PTIGVDFKIK LT+ GK+LKLT
Sbjct: 16 HECSFKILLIGDSGVGKSSLLVSFVVAAAAAHLDDDIAPTIGVDFKIKFLTIGGKKLKLT 75
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGAQGIILVYDVT+RE+FTNL++VW+KE++ +S+N+DC+KML
Sbjct: 76 IWDTAGQERFRTITSSYYRGAQGIILVYDVTKRESFTNLAEVWSKEIESHSSNKDCIKML 135
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK+D++ ER V+REEG+A A+E G LFLE SAKTR+NVE+CFE+LALKIM+VPSLLEE
Sbjct: 136 VGNKIDKEDERTVTREEGLAFAEESGCLFLESSAKTRDNVEKCFEELALKIMDVPSLLEE 195
Query: 186 G-SNVVKRNILKQKPENQSPPIGGCC 210
G S+VVKRNILKQK E+Q+ GGCC
Sbjct: 196 GSSSVVKRNILKQKQESQAKHGGGCC 221
>gi|326515390|dbj|BAK03608.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 154/212 (72%), Positives = 184/212 (86%), Gaps = 8/212 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVA 58
MGS+ G +SYD SFK+LLIGDS VGKSSLLVSF+S++ DD+SPTIGVDFKIK LTV
Sbjct: 1 MGSTPG--SSYDCSFKVLLIGDSAVGKSSLLVSFVSAAPTDDDISPTIGVDFKIKFLTVG 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
K+LKLTIWDTAGQERFRT+TSSYYRGA GIILVYDVT+R++FTNL+DVWAKE++L+STN
Sbjct: 59 DKKLKLTIWDTAGQERFRTITSSYYRGAHGIILVYDVTKRQSFTNLADVWAKEIELHSTN 118
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
++CVKMLVGNK+D+D +R+V+ EEG+A A++ G LFLE SAKTRENVE+CFE+L LKI+E
Sbjct: 119 KECVKMLVGNKLDKDEDRMVTTEEGLAFAQQCGCLFLESSAKTRENVEKCFEELVLKILE 178
Query: 179 VPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
VPSL EEGS+VVKRN LKQK E GGCC
Sbjct: 179 VPSLSEEGSSVVKRNSLKQKHEKS----GGCC 206
>gi|449459232|ref|XP_004147350.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
gi|449513301|ref|XP_004164289.1| PREDICTED: ras-related protein RABC1-like [Cucumis sativus]
Length = 209
Score = 313 bits (801), Expect = 4e-83, Method: Compositional matrix adjust.
Identities = 146/210 (69%), Positives = 176/210 (83%), Gaps = 1/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M S+S Q+ +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K +T GK
Sbjct: 1 MDSTSNQTE-FDYLFKLLMIGDSGVGKSSLLLSFTSDNFEDLSPTIGVDFKVKYVTAGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS+VWAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEVWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++S R V+++EGI +A+E+G LF ECSAKTR NV+QCFE+L LKI++ P
Sbjct: 120 CIKMLVGNKVDKESYRTVTKKEGIDMAREYGCLFTECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS V+RNI K+KP CC
Sbjct: 180 SLLSEGSKGVRRNIFKEKPPQSDASTSSCC 209
>gi|195628816|gb|ACG36230.1| ras-related protein Rab-18 [Zea mays]
Length = 215
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 151/203 (74%), Positives = 179/203 (88%), Gaps = 3/203 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
++ SFKILLIGDSGVGKSSLLVSF+++S D++PTIGVDFKIK LTV GK+LKLTIWD
Sbjct: 12 HECSFKILLIGDSGVGKSSLLVSFVAASHLDGDIAPTIGVDFKIKFLTVGGKKLKLTIWD 71
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+TSSYYRGAQGIILVYDVT+RE+F+NL+DVW KE++ STN+DC+KMLVGN
Sbjct: 72 TAGQERFRTITSSYYRGAQGIILVYDVTKRESFSNLADVWTKEIEANSTNKDCIKMLVGN 131
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG-S 187
KVD+D ER+V+ EEG+A A+E G LFLE SAKTRENVE+CFE+LALKI+EVPSLLEEG S
Sbjct: 132 KVDKDDERMVTEEEGLAFAEESGCLFLESSAKTRENVEKCFEELALKILEVPSLLEEGSS 191
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+VVKR ILKQK E+ + GCC
Sbjct: 192 SVVKRKILKQKQESHAKNGSGCC 214
>gi|308080195|ref|NP_001183679.1| putative NAC domain transcription factor superfamily protein [Zea
mays]
gi|238013812|gb|ACR37941.1| unknown [Zea mays]
gi|414586248|tpg|DAA36819.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 215
Score = 311 bits (797), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 145/206 (70%), Positives = 173/206 (83%), Gaps = 2/206 (0%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
Q +D FK+LLIGDSGVGKSSLL+ F + S DDLSPTIGVDFK+K++++ GK+LKL I
Sbjct: 10 QQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFDDLSPTIGVDFKVKMVSIGGKKLKLAI 69
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRTLTSSYYRGAQGII+VYDV+RRETFTNLSD+WAKE+DLYSTNQDCVKMLV
Sbjct: 70 WDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEIDLYSTNQDCVKMLV 129
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L LKI++ PSLL +
Sbjct: 130 GNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADA 189
Query: 187 SN--VVKRNILKQKPENQSPPIGGCC 210
S+ V K+NI KQK G CC
Sbjct: 190 SSAGVSKKNIFKQKAPEADAATGSCC 215
>gi|255584090|ref|XP_002532788.1| protein with unknown function [Ricinus communis]
gi|223527476|gb|EEF29607.1| protein with unknown function [Ricinus communis]
Length = 251
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 160/251 (63%), Positives = 183/251 (72%), Gaps = 47/251 (18%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
+NSYD SFKILLIGDSGVGKSS+L+SFIS+SV DLSPTIGVDFKIK+L+ GKRLKLTIW
Sbjct: 1 NNSYDYSFKILLIGDSGVGKSSILLSFISNSVHDLSPTIGVDFKIKMLSAGGKRLKLTIW 60
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERF TL SSYYRGA GIILVYDVTRRETFTNLSD WAKEV+LYSTN++C+K+LVG
Sbjct: 61 DTAGQERFGTLISSYYRGAHGIILVYDVTRRETFTNLSDTWAKEVELYSTNKECIKVLVG 120
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALK------------ 175
NKVDRDSER VS+EEG+ALA+EH FLECSAKTRENV QCF++L+LK
Sbjct: 121 NKVDRDSERAVSKEEGMALAEEHKCSFLECSAKTRENVLQCFKELSLKISNIVPFYEYVY 180
Query: 176 -----------------------------------IMEVPSLLEEGSNVVKRNILKQKPE 200
I+EVPSLLE GS VK+++LKQK E
Sbjct: 181 CRYVNHTLHAILPYYQRGNFKENFELPEAALILEQILEVPSLLENGSAAVKQHVLKQKQE 240
Query: 201 NQSPPIGGCCS 211
++ GGCCS
Sbjct: 241 YKALHGGGCCS 251
>gi|217069806|gb|ACJ83263.1| unknown [Medicago truncatula]
gi|388498948|gb|AFK37540.1| unknown [Medicago truncatula]
Length = 212
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 158/214 (73%), Positives = 178/214 (83%), Gaps = 5/214 (2%)
Query: 1 MGSSSGQSNS-YDLSFKILLIGDSGVGKSSLLVSFISS--SVDDLSPTIGVDFKIKLLTV 57
MGSSS NS YD SFK+LLIGDSGVGKSSLL+SFIS+ S+DDLSPTIGVDFKIKL T+
Sbjct: 1 MGSSSKVGNSNYDYSFKVLLIGDSGVGKSSLLLSFISNANSLDDLSPTIGVDFKIKLFTI 60
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
KRLKLTIWDTAGQERF T+ SYYRGA GI+LVYDVTRRETFTNL WAKEV LYST
Sbjct: 61 GDKRLKLTIWDTAGQERFGTVICSYYRGAHGIVLVYDVTRRETFTNLVGTWAKEVGLYST 120
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
N DC+K+LVGNKVD++SER VS+EEG+ALAKEH LFLECSAKT+ENV+QCF+ L LKI+
Sbjct: 121 NHDCIKILVGNKVDKESERAVSKEEGMALAKEHRCLFLECSAKTKENVQQCFKDLTLKIL 180
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
EVPSL E+GS VKR KQK ++ GGCCS
Sbjct: 181 EVPSLREKGSVEVKRQ--KQKRFYETSQRGGCCS 212
>gi|363808158|ref|NP_001242481.1| uncharacterized protein LOC100787603 [Glycine max]
gi|255639535|gb|ACU20062.1| unknown [Glycine max]
gi|255639578|gb|ACU20083.1| unknown [Glycine max]
Length = 209
Score = 309 bits (791), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 174/207 (84%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
SS + +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K +T+ GK+LK
Sbjct: 3 SSSEHQEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGKKLK 62
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT+SYYRGAQGII+VYDVTRR TFTNLS++WAKE+DLYSTNQDC+K
Sbjct: 63 LAIWDTAGQERFRTLTNSYYRGAQGIIMVYDVTRRGTFTNLSEIWAKEIDLYSTNQDCIK 122
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
MLVGNKVD++ +RVV+++EGI A+E+G LF+ECSAKTR NV+QCFE+L LKI++ PSL+
Sbjct: 123 MLVGNKVDKEGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLI 182
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
EGS VK+NI K++P CC
Sbjct: 183 AEGSKGVKKNIFKERPPQSDASTSSCC 209
>gi|388517279|gb|AFK46701.1| unknown [Lotus japonicus]
Length = 209
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 170/207 (82%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
SS +D FK+L+IGDSGVGKSSLL+SF S D+SPTIGVDFK+K + + GK+LK
Sbjct: 3 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 62
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS++WAKE+DLYSTNQDC+K
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 122
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
MLVGNKVD++S+RVVS++EGI A+E+G LF+ECSAKTR NV+QCFE+L LKI++ PSLL
Sbjct: 123 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 182
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
EGS VK+NI K K CC
Sbjct: 183 AEGSKGVKKNIFKDKQPQADASTSSCC 209
>gi|1370174|emb|CAA98164.1| RAB1Y [Lotus japonicus]
Length = 207
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 142/207 (68%), Positives = 170/207 (82%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
SS +D FK+L+IGDSGVGKSSLL+SF S D+SPTIGVDFK+K + + GK+LK
Sbjct: 1 SSSAPQEFDYLFKLLMIGDSGVGKSSLLLSFTSDEFQDMSPTIGVDFKVKYVAIGGKKLK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS++WAKE+DLYSTNQDC+K
Sbjct: 61 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
MLVGNKVD++S+RVVS++EGI A+E+G LF+ECSAKTR NV+QCFE+L LKI++ PSLL
Sbjct: 121 MLVGNKVDKESDRVVSKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 180
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
EGS VK+NI K K CC
Sbjct: 181 AEGSKGVKKNIFKDKQPQADASTSSCC 207
>gi|356576370|ref|XP_003556305.1| PREDICTED: ras-related protein RABC2a-like [Glycine max]
Length = 212
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 156/215 (72%), Positives = 178/215 (82%), Gaps = 7/215 (3%)
Query: 1 MGSSS--GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLT 56
MGS S G SN YD SFK+LL+GDSGVGKSSLL+SFIS+S ++ LSPTIGVDFKIKL T
Sbjct: 1 MGSDSRVGSSN-YDYSFKVLLVGDSGVGKSSLLLSFISNSNSINHLSPTIGVDFKIKLFT 59
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
V GKRLKLTIWDTAGQERF T+ SYYRGA GIILVYDVTRRETFTNL D+WAKEV+LYS
Sbjct: 60 VGGKRLKLTIWDTAGQERFGTVIGSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVELYS 119
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
TN D +K+LVGNKVD++SER VS+EEG+ALA++H LFLECSAKTRENV+QCF L LKI
Sbjct: 120 TNHDSIKILVGNKVDKESERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKI 179
Query: 177 MEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
++VPSL E GS VKR KQK ++ GGCCS
Sbjct: 180 LDVPSLRERGSVAVKRQ--KQKHIYETSKSGGCCS 212
>gi|449465314|ref|XP_004150373.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
gi|449513018|ref|XP_004164205.1| PREDICTED: ras-related protein RABC2a-like [Cucumis sativus]
Length = 215
Score = 307 bits (786), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 152/213 (71%), Positives = 182/213 (85%), Gaps = 3/213 (1%)
Query: 1 MGSSS-GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAG 59
MGSSS G+ SYD SFKILLIGDSGVGKSS+L+S+IS+ V DLSPTIGVDFKIK++TV G
Sbjct: 2 MGSSSKGRCISYDYSFKILLIGDSGVGKSSILLSYISNFVHDLSPTIGVDFKIKMVTVGG 61
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K+LKLTIWDTAGQERF TLTSSYYRGA GIILVYDVTRRETFTNL +VWAKEV+LY TN+
Sbjct: 62 KKLKLTIWDTAGQERFGTLTSSYYRGAHGIILVYDVTRRETFTNLINVWAKEVELYLTNR 121
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
+C+K+LVGNKVDR S+R V+ EEG+ +AK+H SLFLECSA+TRENV++CF++L+ K+MEV
Sbjct: 122 ECIKILVGNKVDRGSDRAVTTEEGMEVAKKHKSLFLECSARTRENVDRCFKELSSKMMEV 181
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIG--GCC 210
PSLLE GS VVK+ IL + + + GCC
Sbjct: 182 PSLLENGSVVVKQKILDKTQARKEVEVNDRGCC 214
>gi|224097728|ref|XP_002311057.1| predicted protein [Populus trichocarpa]
gi|222850877|gb|EEE88424.1| predicted protein [Populus trichocarpa]
Length = 214
Score = 306 bits (785), Expect = 2e-81, Method: Compositional matrix adjust.
Identities = 163/209 (77%), Positives = 180/209 (86%), Gaps = 1/209 (0%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
S G +NSYD SFKILLIGDSGVGKSSLL+SFISSSV DLSPTIGVDFK+K+LTV GKRLK
Sbjct: 6 SKGGNNSYDYSFKILLIGDSGVGKSSLLLSFISSSVRDLSPTIGVDFKVKMLTVGGKRLK 65
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
LTIWDTAGQERF TL SSYYRGA GIILVYDVTRRETF NLSD+WAKEV+LYSTN D +K
Sbjct: 66 LTIWDTAGQERFGTLISSYYRGAHGIILVYDVTRRETFENLSDIWAKEVELYSTNHDGIK 125
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNKVDRDSER VSREEG+ALA++H F ECSAKT ENV QCF++L LKI+EVPSLL
Sbjct: 126 ILVGNKVDRDSERAVSREEGMALAQQHKCSFFECSAKTSENVLQCFKELTLKILEVPSLL 185
Query: 184 EEGSNVVKRNILKQKPENQSPPIGG-CCS 211
E GS VVK+ I+K K Q+P GG CCS
Sbjct: 186 ENGSVVVKQQIMKDKQVYQAPRGGGSCCS 214
>gi|356535505|ref|XP_003536285.1| PREDICTED: ras-related protein RABC2a [Glycine max]
gi|255629553|gb|ACU15124.1| unknown [Glycine max]
Length = 212
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 154/214 (71%), Positives = 179/214 (83%), Gaps = 5/214 (2%)
Query: 1 MGSSSG-QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTV 57
MGS+S +S++YD SFK+LLIGDSGVGKSSLL+SFIS+S ++DLSPTIGVDFKIKL TV
Sbjct: 1 MGSASRVESSNYDYSFKVLLIGDSGVGKSSLLLSFISNSNSINDLSPTIGVDFKIKLFTV 60
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
GKRLKLTIWDTAGQERF T+ SSYYRGA GIILVYDVTRRETFTNL D+WAKEV+ YST
Sbjct: 61 GGKRLKLTIWDTAGQERFGTVISSYYRGAHGIILVYDVTRRETFTNLIDIWAKEVERYST 120
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
N +K+LVGNKVD+DSER VS+EEG+ALA++H LFLECSAKTRENV+QCF L LKI+
Sbjct: 121 NHGSIKILVGNKVDKDSERAVSKEEGMALAQQHRCLFLECSAKTRENVQQCFNDLTLKIL 180
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
+VP L E+GS VKR KQK ++ GCCS
Sbjct: 181 DVPGLREKGSVAVKRQ--KQKHIYETSQSAGCCS 212
>gi|351721968|ref|NP_001235436.1| uncharacterized protein LOC100526880 [Glycine max]
gi|255631052|gb|ACU15890.1| unknown [Glycine max]
Length = 209
Score = 306 bits (784), Expect = 4e-81, Method: Compositional matrix adjust.
Identities = 141/210 (67%), Positives = 173/210 (82%), Gaps = 1/210 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSSG +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVD K+K + + GK
Sbjct: 1 MDSSSGH-QEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDIKVKYVMMGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS++WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KML GNK+D+D +RVV+++EGI A+E+G LF+ECSAKTR NV+QCFE+L LKI++ P
Sbjct: 120 CIKMLAGNKLDKDGDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SL+ EGS VK+NI K +P CC
Sbjct: 180 SLIAEGSKGVKKNIFKDRPPQSDASASSCC 209
>gi|357464685|ref|XP_003602624.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|355491672|gb|AES72875.1| GTP-binding protein yptV3 [Medicago truncatula]
gi|388519551|gb|AFK47837.1| unknown [Medicago truncatula]
Length = 207
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 145/210 (69%), Positives = 176/210 (83%), Gaps = 3/210 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SS+ Q +D FK+L+IGDSGVGKSSLL+ F S S ++LSPTIGVDFK+K T+ GK
Sbjct: 1 MDSSTPQE--FDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGK 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+ YDVTRR+TFTNLS+VWAKEVDLYSTNQD
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQD 118
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++S+RVV+++EGI A+E+G LF+ECSAKTR NV+ CFE+L LKI++ P
Sbjct: 119 CIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTP 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS K+NI K KP++ + GCC
Sbjct: 179 SLLAEGSKGNKKNIFKDKPQSDAST-SGCC 207
>gi|8778652|gb|AAF79660.1|AC022314_1 F9C16.3 [Arabidopsis thaliana]
Length = 233
Score = 305 bits (782), Expect = 6e-81, Method: Compositional matrix adjust.
Identities = 152/220 (69%), Positives = 175/220 (79%), Gaps = 22/220 (10%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQ +D FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK+K LT+ K
Sbjct: 1 MGSSSGQPE-FDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 59
Query: 61 RLKLTIWDT---------------------AGQERFRTLTSSYYRGAQGIILVYDVTRRE 99
+LKL IWDT AGQERFRTLTSSYYRGAQGII+VYDVTRR+
Sbjct: 60 KLKLAIWDTVSHCCLSSNVTGEEEESWICNAGQERFRTLTSSYYRGAQGIIMVYDVTRRD 119
Query: 100 TFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSA 159
TFTNLSD+WAKE+DLYSTNQDC+KMLVGNKVD++SER VS++EGI A+E+G LFLECSA
Sbjct: 120 TFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSA 179
Query: 160 KTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKP 199
KTR NVEQCFE+L LKI+E PSL EGS+ K+NI KQ P
Sbjct: 180 KTRVNVEQCFEELVLKILETPSLTAEGSSGGKKNIFKQNP 219
>gi|224093425|ref|XP_002309918.1| predicted protein [Populus trichocarpa]
gi|222852821|gb|EEE90368.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 305 bits (782), Expect = 7e-81, Method: Compositional matrix adjust.
Identities = 139/207 (67%), Positives = 173/207 (83%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
SS S +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K + + GK+LK
Sbjct: 3 SSSSSPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKKLK 62
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLTSSYYRGAQGI++VYDVTRR+TFTNLS++WAKE+DLYSTNQDC+K
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIVMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 122
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNKVD++S+RVV+++EGI A+E+G LF+ECSAKTR NV+QCFE+L LK+++ PSLL
Sbjct: 123 LLVGNKVDKESDRVVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKVLDTPSLL 182
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
EGS VK+NI +K CC
Sbjct: 183 AEGSKGVKKNIFNEKRPQPDASTSSCC 209
>gi|15232785|ref|NP_187602.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185198|ref|NP_001189850.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|334185200|ref|NP_001189851.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|75204354|sp|Q9SF92.1|RAC2B_ARATH RecName: Full=Ras-related protein RABC2b; Short=AtRABC2b; AltName:
Full=Ras-related protein Rab18C; Short=AtRab18C
gi|6681328|gb|AAF23245.1|AC015985_3 putative Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|45773784|gb|AAS76696.1| At3g09910 [Arabidopsis thaliana]
gi|46359845|gb|AAS88786.1| At3g09910 [Arabidopsis thaliana]
gi|332641308|gb|AEE74829.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641309|gb|AEE74830.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
gi|332641310|gb|AEE74831.1| RAB GTPase-like protein C2B [Arabidopsis thaliana]
Length = 205
Score = 305 bits (781), Expect = 8e-81, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 186/211 (88%), Gaps = 7/211 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS YDLSFKILLIGDSGVGKSSLL+SFISSSV+DL+PTIGVDFKIK + V GK
Sbjct: 1 MGSSSGQSG-YDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE++LYSTN D
Sbjct: 60 RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVDR+SER VSREEG+ALAK+ LF ECSA+TRENV CFE+LALKIMEVP
Sbjct: 120 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS+ VKR KP+ ++ G CCS
Sbjct: 180 SLLEEGSSSVKR-----KPDYRAHQ-GRCCS 204
>gi|224080973|ref|XP_002306250.1| predicted protein [Populus trichocarpa]
gi|222855699|gb|EEE93246.1| predicted protein [Populus trichocarpa]
Length = 209
Score = 305 bits (780), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 140/207 (67%), Positives = 171/207 (82%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
SS + +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K + + GK LK
Sbjct: 3 SSSNAPEFDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKFVNIGGKNLK 62
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLS++WAKE+DLYSTNQDC+K
Sbjct: 63 LAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSEIWAKEIDLYSTNQDCIK 122
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
MLVGNKVD++S+R V+++EGI A+E+G LF+ECSAKTR NV+QCFE+L LKI++ PSLL
Sbjct: 123 MLVGNKVDKESDRAVTKKEGINFAREYGCLFIECSAKTRVNVQQCFEELVLKILDTPSLL 182
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
EGS VK+NI +K CC
Sbjct: 183 AEGSKGVKKNIFSEKRPQPDASTSSCC 209
>gi|217075322|gb|ACJ86021.1| unknown [Medicago truncatula]
Length = 207
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 175/210 (83%), Gaps = 3/210 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SS+ Q +D FK+L+IGDSGVGKSSLL+ F S S ++LSPTIGVDFK+K T+ GK
Sbjct: 1 MDSSTPQE--FDYVFKLLMIGDSGVGKSSLLLCFTSDSFENLSPTIGVDFKVKYFTIDGK 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+ YDVTRR+TFTNLS+VWAKEVDLYSTNQD
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRDTFTNLSEVWAKEVDLYSTNQD 118
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++S+RVV+++EGI A+E+G LF+ECSAKTR NV+ CFE+L LKI++ P
Sbjct: 119 CIKMLVGNKVDKESDRVVTKKEGIDFAREYGCLFIECSAKTRVNVQHCFEELVLKILDTP 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL E S K+NI K KP++ + GCC
Sbjct: 179 SLLAESSKGNKKNIFKDKPQSDAST-SGCC 207
>gi|297833756|ref|XP_002884760.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
gi|297330600|gb|EFH61019.1| hypothetical protein ARALYDRAFT_478315 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 303 bits (775), Expect = 4e-80, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 186/211 (88%), Gaps = 7/211 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS YDLSFKILLIGDSGVGKSSLL+SFISSSV+DL+PTIGVDFKIK + V GK
Sbjct: 1 MGSSSGQSG-YDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+DVWAKE++LYSTN D
Sbjct: 60 RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFMNLADVWAKEIELYSTNHD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVDR+SER VS+EEG+ALAK+ LF ECSA+TR+NV CFE+LALKIMEVP
Sbjct: 120 CIKMLVGNKVDRESERKVSQEEGMALAKDLKCLFHECSARTRDNVNWCFEELALKIMEVP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS+ VKR KP+ +S G CCS
Sbjct: 180 SLLEEGSSSVKR-----KPDYRSHQ-GRCCS 204
>gi|356516366|ref|XP_003526866.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 143/206 (69%), Positives = 171/206 (83%), Gaps = 1/206 (0%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
S + ++ FK+L+IGDSGVGKSSLL+ F S S +DLSPTIGVDFK+K LT+ GK+LKL
Sbjct: 3 SSPTQEFEYLFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGKKLKL 62
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRTLTSSYYRGAQGII+ YDVTRRETFTNLS++WAKE+DLYSTN +CVKM
Sbjct: 63 AIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPECVKM 122
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
LVGNKVD++S+RVV+++EGI A+E G LF ECSAKTR NV+QCFE+L LKI++ PSLL
Sbjct: 123 LVGNKVDKESDRVVTKKEGIDFARECGCLFTECSAKTRANVQQCFEELVLKILDTPSLLA 182
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
EGS K+NI K KP +QS CC
Sbjct: 183 EGSKGNKKNIFKDKP-SQSDATSSCC 207
>gi|302782571|ref|XP_002973059.1| rab family GTPase [Selaginella moellendorffii]
gi|302805556|ref|XP_002984529.1| rab family GTPase [Selaginella moellendorffii]
gi|300147917|gb|EFJ14579.1| rab family GTPase [Selaginella moellendorffii]
gi|300159660|gb|EFJ26280.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 300 bits (767), Expect = 3e-79, Method: Compositional matrix adjust.
Identities = 147/203 (72%), Positives = 170/203 (83%), Gaps = 1/203 (0%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
N +D FKILLIGDSGVGKSSLL+ F + + DDLSPTIGVDFK+KL+T+ GKRLKLTIWD
Sbjct: 13 NEFDHLFKILLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKLKLMTLEGKRLKLTIWD 72
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRTLTSSYYRGAQG+ILVYDVTRR+TFTNL DVW KEV+LYSTNQDCVK+LVGN
Sbjct: 73 TAGQERFRTLTSSYYRGAQGVILVYDVTRRDTFTNLQDVWLKEVELYSTNQDCVKLLVGN 132
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
KVDRDSER VS+ EGIA A+++G LFLE SAKTR NV+QCFE+L KI+E PSL+ E +
Sbjct: 133 KVDRDSERAVSQHEGIAFARKYGCLFLESSAKTRINVQQCFEELVRKILETPSLVAEAKS 192
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
VK+NIL+ E P G C+
Sbjct: 193 -VKKNILRPGNEPPPPENAGSCA 214
>gi|356508969|ref|XP_003523225.1| PREDICTED: ras-related protein RABC1-like [Glycine max]
Length = 207
Score = 299 bits (766), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 144/210 (68%), Positives = 173/210 (82%), Gaps = 3/210 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSS Q Y FK+L+IGDSGVGKSSLL+ F S S +DLSPTIGVDFK+K LT+ GK
Sbjct: 1 MDSSSTQEFEY--LFKLLMIGDSGVGKSSLLLCFTSDSFEDLSPTIGVDFKVKYLTMEGK 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+ YDVTRRETFTNLS++WAKE+DLYSTN +
Sbjct: 59 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMAYDVTRRETFTNLSEIWAKEIDLYSTNPE 118
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++ +RVV+++EG+ A+E G LF+ECSAKTR NV+QCFE+L LKI++ P
Sbjct: 119 CIKMLVGNKVDKEGDRVVTKKEGVDFARECGCLFIECSAKTRVNVQQCFEELVLKILDTP 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS K+NI K KP +Q+ CC
Sbjct: 179 SLLAEGSKGNKKNIFKDKP-SQTNATSSCC 207
>gi|218195901|gb|EEC78328.1| hypothetical protein OsI_18064 [Oryza sativa Indica Group]
Length = 213
Score = 299 bits (765), Expect = 5e-79, Method: Compositional matrix adjust.
Identities = 139/200 (69%), Positives = 165/200 (82%), Gaps = 4/200 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FK+LLIGDSGVGKSSLL+ F S + +DLSPTIGVDFK+K++ GK+LKL IWDTA
Sbjct: 18 FDYLFKLLLIGDSGVGKSSLLLRFTSDAFEDLSPTIGVDFKVKMVNTGGKKLKLAIWDTA 77
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQ VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLVGNKV
Sbjct: 78 GQERFRTLTSSYYRGAQ----VYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKV 133
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L LKI++ PSLL + S+
Sbjct: 134 DKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELVLKILDTPSLLADASSGA 193
Query: 191 KRNILKQKPENQSPPIGGCC 210
K+NI KQKP CC
Sbjct: 194 KKNIFKQKPPEADAAASSCC 213
>gi|147809843|emb|CAN76031.1| hypothetical protein VITISV_027716 [Vitis vinifera]
Length = 197
Score = 293 bits (749), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 140/210 (66%), Positives = 166/210 (79%), Gaps = 14/210 (6%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
+ SS +D FK+LLIGDSGVGKS+LL+S VDFK+K + + GK
Sbjct: 2 LPDSSSSQPEFDYLFKLLLIGDSGVGKSTLLLS--------------VDFKVKHVNIGGK 47
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+DLYSTNQD
Sbjct: 48 KLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQD 107
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SERVV+++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 108 CIKMLVGNKVDKESERVVTKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 167
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL EGS+ V++NI KQKP GCC
Sbjct: 168 SLLAEGSSGVRKNIFKQKPPESDASTSGCC 197
>gi|116786676|gb|ABK24198.1| unknown [Picea sitchensis]
Length = 222
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 143/214 (66%), Positives = 164/214 (76%), Gaps = 9/214 (4%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKR 61
G SS +D SFK+LL GDSGVGKSSLL+ F S S DD TIGVDFK KL+TV KR
Sbjct: 13 GDSSRSQGDFDYSFKLLLAGDSGVGKSSLLLRFTSDSFDDAIATIGVDFKQKLMTVGDKR 72
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
LKLTIWDTAGQE+FRTLT+SYYRGA G I VYDVTRRETFTNL +VW +E +YSTNQDC
Sbjct: 73 LKLTIWDTAGQEKFRTLTNSYYRGAHGFIFVYDVTRRETFTNLKNVWLEEALIYSTNQDC 132
Query: 122 VKMLVGNKVDR--DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
+KM+VGNKVDR DSE VVS+EEGI AK+HG LF+ECSAKTR NVEQCFE+L LKI++
Sbjct: 133 IKMVVGNKVDRAMDSESVVSKEEGIEFAKQHGCLFIECSAKTRLNVEQCFEELLLKILDT 192
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGG---CC 210
PSLLE S+V K NI + + P +G CC
Sbjct: 193 PSLLEGSSSVEKNNIF----DYEQPTLGANDPCC 222
>gi|168004225|ref|XP_001754812.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162693916|gb|EDQ80266.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 137/213 (64%), Positives = 172/213 (80%), Gaps = 7/213 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M +S G+ +D FKILLIGDSGVGKSSLLV F + + DDLSPTIGVDFK+K++T+ GK
Sbjct: 1 MAASGGE---FDHLFKILLIGDSGVGKSSLLVRFTADTFDDLSPTIGVDFKVKMMTLGGK 57
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDV+RR TFTNLSD+W KEVD YSTN D
Sbjct: 58 KLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTNLSDIWLKEVDRYSTNPD 117
Query: 121 CVKMLVGNKVD-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
C+KML+GNKVD + ERVV+++EGIA A++HG LFLE SAKT NV++CF++L KI++
Sbjct: 118 CIKMLIGNKVDLEEHERVVTKKEGIAFARQHGCLFLEASAKTSVNVQRCFDELVQKILDT 177
Query: 180 PSLLEEGSNVVKRNILK--QKPENQSPPIGGCC 210
PSL + + +K+N+L+ + + +P GG C
Sbjct: 178 PSLTADTAQ-LKKNVLRPGETADLPAPDAGGAC 209
>gi|388521533|gb|AFK48828.1| unknown [Medicago truncatula]
Length = 158
Score = 278 bits (710), Expect = 2e-72, Method: Compositional matrix adjust.
Identities = 132/158 (83%), Positives = 144/158 (91%)
Query: 54 LLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVD 113
+LTV GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLS+VW+KE++
Sbjct: 1 MLTVGGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSEVWSKELE 60
Query: 114 LYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
LYSTNQ+CVKMLVGNKVD+DSER VSREEG++LAKE G L LECSAKTRENVE+CFE+LA
Sbjct: 61 LYSTNQECVKMLVGNKVDKDSERAVSREEGLSLAKELGCLLLECSAKTRENVEKCFEELA 120
Query: 174 LKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
LKIME PSLLEEGS KRN+LKQK E QS GGCCS
Sbjct: 121 LKIMEAPSLLEEGSAATKRNVLKQKQEPQSSQNGGCCS 158
>gi|168019492|ref|XP_001762278.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162686356|gb|EDQ72745.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 276 bits (705), Expect = 5e-72, Method: Compositional matrix adjust.
Identities = 134/213 (62%), Positives = 172/213 (80%), Gaps = 7/213 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M +S G+ +D FK+LLIGDSGVGKSSLL+ F + + DDLSPTIGVDFK+K++T+ GK
Sbjct: 1 MAASGGE---FDHLFKVLLIGDSGVGKSSLLLRFTADTFDDLSPTIGVDFKVKMMTLGGK 57
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDV+RR TFT+LSD+W KEVD +ST D
Sbjct: 58 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVSRRATFTDLSDIWLKEVDRFSTKPD 117
Query: 121 CVKMLVGNKVD-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
C+KML+GNKVD + ERVV+++EGIA A++HG LFLE SAKT NV++CF++L KI++
Sbjct: 118 CIKMLIGNKVDLEERERVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVQKILDT 177
Query: 180 PSLLEEGSNVVKRNILK--QKPENQSPPIGGCC 210
PSL++ + +K+N+L+ + + SP GG C
Sbjct: 178 PSLIDNVAQ-LKKNVLRPGETADLPSPAAGGAC 209
>gi|168006773|ref|XP_001756083.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162692593|gb|EDQ78949.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 275 bits (704), Expect = 7e-72, Method: Compositional matrix adjust.
Identities = 134/210 (63%), Positives = 171/210 (81%), Gaps = 4/210 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
+G N +D FKILL+G+SGVGKSSLL+ F +S DDLSPTIGVDFK+K++++ GKRLKL
Sbjct: 2 AGPGNDFDHLFKILLVGNSGVGKSSLLLRFTASKFDDLSPTIGVDFKVKMVSLQGKRLKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
TIWDTAGQERFRTLTS+YYRGAQGIILVYDVTRR TFT+LSDVW KEVD +STN+DC+KM
Sbjct: 62 TIWDTAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRFSTNKDCIKM 121
Query: 125 LVGNKVD-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
L+GNKVD +SERVV+++EGIA A++HG LFLE SAKT NV++CF++L KI++ PSL
Sbjct: 122 LIGNKVDLEESERVVAKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKILDTPSLT 181
Query: 184 EEGSNVVKRNILK--QKPENQSPPIGGCCS 211
+ + ++ N+L+ Q + +GG CS
Sbjct: 182 ADTAQ-LETNLLRSDQMWDQGYLALGGVCS 210
>gi|255556840|ref|XP_002519453.1| protein with unknown function [Ricinus communis]
gi|223541316|gb|EEF42867.1| protein with unknown function [Ricinus communis]
Length = 325
Score = 274 bits (701), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 130/178 (73%), Positives = 156/178 (87%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGS SG+ + YD SFKI+LIGDS VGKSSL+VSFIS +V +L TIG+D K+K +TV GK
Sbjct: 101 MGSPSGKGSDYDHSFKIVLIGDSNVGKSSLIVSFISGAVTELPNTIGMDIKMKQITVGGK 160
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYR A GIILVYDVT++++FTNL ++W KEV+LYSTN+D
Sbjct: 161 RLKLTIWDTAGQERFRTLTSSYYRDAHGIILVYDVTQKQSFTNLENLWTKEVELYSTNKD 220
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
C+KMLVGNKVDR+SER VSREEG+ LAK+ G LFLE SAKTRENVE+CF+ LALK+++
Sbjct: 221 CIKMLVGNKVDRESERAVSREEGMDLAKQQGFLFLESSAKTRENVEKCFDDLALKMLQ 278
>gi|168018849|ref|XP_001761958.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162687013|gb|EDQ73399.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 213
Score = 267 bits (682), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 135/205 (65%), Positives = 162/205 (79%), Gaps = 5/205 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FKILLIG+SGVGKSSLL+ F + DDLSPTIGVDFK+K+L + GKRLKLTIWDTA
Sbjct: 9 FDNLFKILLIGNSGVGKSSLLLRFTAGKFDDLSPTIGVDFKVKMLNLQGKRLKLTIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGIILVYDVTRR TFT+LSDVW KEVD YSTN+DC+ MLVG+KV
Sbjct: 69 GQERFRTLTSSYYRGAQGIILVYDVTRRATFTDLSDVWLKEVDRYSTNKDCIMMLVGSKV 128
Query: 131 D-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +S RVV+++EGIA A++HG LFLE SAKT NV++CF++L KI++ PSL + +
Sbjct: 129 DLEESGRVVTKKEGIAFARQHGCLFLEASAKTSINVQRCFDELVHKIIDTPSLTADTGKL 188
Query: 190 VKRNIL---KQKPENQSPPIGGCCS 211
N+L K + S P GG CS
Sbjct: 189 KPTNLLRPDKASDQGTSTP-GGICS 212
>gi|168061333|ref|XP_001782644.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162665877|gb|EDQ52547.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 211
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 165/210 (78%), Gaps = 4/210 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
+G + +D+ KI ++G+SGVGKSSLL+ F + D+L PTIGVDFK+K++ + GKRLKL
Sbjct: 2 AGPGDDFDILLKIPVVGNSGVGKSSLLLRFAAGKFDELWPTIGVDFKVKMMNLQGKRLKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
TIWDTAGQERFRTLTS+YYRGAQGIILVYDVTRR TFT+L++VW KEV+ +STN+DC+KM
Sbjct: 62 TIWDTAGQERFRTLTSTYYRGAQGIILVYDVTRRATFTDLTNVWLKEVERFSTNKDCIKM 121
Query: 125 LVGNKVD-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
L+GNKVD +SER+V+++E IA AK+HG LFLE SAKT NV++CF +L LKI++ P+L
Sbjct: 122 LIGNKVDLEESERMVTKKEAIAFAKQHGCLFLEASAKTSINVQRCFNELVLKILDTPNLT 181
Query: 184 EEGSNVVKRNILKQKP--ENQSPPIGGCCS 211
+ S +K N+ K P + S GG CS
Sbjct: 182 AD-SVQLKPNLFKPNPKWDRGSLTPGGVCS 210
>gi|168025036|ref|XP_001765041.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
gi|162683850|gb|EDQ70257.1| Rab18/RabC-family small GTPase [Physcomitrella patens subsp.
patens]
Length = 208
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 123/196 (62%), Positives = 155/196 (79%), Gaps = 1/196 (0%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
+G +D FK+LLIGDSGVGKSSLL+ F + DDLSPTIGVDFK++++ + KRLKL
Sbjct: 2 AGSRGEFDHLFKVLLIGDSGVGKSSLLLRFTADKFDDLSPTIGVDFKVEMMILGTKRLKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
TIWDTAGQERFRTLTSSYYRGA GIILVYDV+RR TFT+ SDVW KEV+ +STN+DC+K+
Sbjct: 62 TIWDTAGQERFRTLTSSYYRGAHGIILVYDVSRRTTFTDFSDVWLKEVEWFSTNKDCIKV 121
Query: 125 LVGNKVD-RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
LVGNKVD + ERVV+++EG+A A++HG LFLE SAKT NV++CF++L KI++ PSL
Sbjct: 122 LVGNKVDLEERERVVAKKEGVAFARQHGCLFLEASAKTCVNVQRCFDELVQKILDTPSLH 181
Query: 184 EEGSNVVKRNILKQKP 199
+ + K I K P
Sbjct: 182 ANTAQLRKNVIYKCPP 197
>gi|413920113|gb|AFW60045.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 157
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 111/157 (70%), Positives = 134/157 (85%)
Query: 54 LLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVD 113
++T+ GK+LKL IWDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+D
Sbjct: 1 MVTIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEID 60
Query: 114 LYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
LYSTNQDC+KMLVGNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L
Sbjct: 61 LYSTNQDCIKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELV 120
Query: 174 LKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
LKI++ PSLL + S+ K+NI KQKP CC
Sbjct: 121 LKILDTPSLLADASSGAKKNIFKQKPPEADAAASSCC 157
>gi|303276288|ref|XP_003057438.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226461790|gb|EEH59083.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 218
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 111/175 (63%), Positives = 145/175 (82%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D K+LL+GDSGVGKSSLLV F +D SPTIGVDFK+K L GKRLKLT+WDTA
Sbjct: 19 HDHVIKLLLVGDSGVGKSSLLVRFTDDVFEDQSPTIGVDFKLKYLNARGKRLKLTVWDTA 78
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQGI+ VYD+T+RE+F N+S++WAKEVDLY+T +DCVK+++GNK+
Sbjct: 79 GQERFRTLTSSYYRGAQGIVFVYDITKRESFENVSEIWAKEVDLYATVEDCVKIVIGNKI 138
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
D++ R VSR+EG A A+++G LFLE SAK+R NV++ F++L ++++ PSLL E
Sbjct: 139 DKEKAREVSRKEGEAFAEDNGCLFLETSAKSRRNVKEAFDELVSRVLDTPSLLTE 193
>gi|147788167|emb|CAN64836.1| hypothetical protein VITISV_030374 [Vitis vinifera]
Length = 240
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 135/201 (67%), Positives = 148/201 (73%), Gaps = 13/201 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
YDLSFKILLIGDS VGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GKRLKLTIWDT
Sbjct: 53 YDLSFKILLIGDSAVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGKRLKLTIWDTG 112
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
+ T S ++ + V+ T LS W + DL + V K+
Sbjct: 113 AK---LTHLSKFFIFDGAMRFVH--TSGNFVPRLSIHW--KFDLEEGGE------VFYKL 159
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D +SERVVSREEGIALAKEHG LF ECSAKTRENVE+CFE+LALKIMEVPSLLEEGS V
Sbjct: 160 DLESERVVSREEGIALAKEHGCLFFECSAKTRENVEKCFEELALKIMEVPSLLEEGSTVG 219
Query: 191 KRNILKQKPENQSPPIGGCCS 211
KRNILK KPENQ PP GGCCS
Sbjct: 220 KRNILKPKPENQPPPTGGCCS 240
>gi|255076861|ref|XP_002502096.1| predicted protein [Micromonas sp. RCC299]
gi|226517361|gb|ACO63354.1| predicted protein [Micromonas sp. RCC299]
Length = 210
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 113/185 (61%), Positives = 151/185 (81%), Gaps = 4/185 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
++ +D + K+LL+GDSGVGKSSLL+ F + + ++LSPTIGVDFK+K + +AGKRLKLT+W
Sbjct: 9 TSHFDHTIKLLLVGDSGVGKSSLLLRFCNDTFEELSPTIGVDFKLKYMDMAGKRLKLTVW 68
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYRGAQGI+ VYD+TRR+TF L++VW+KEV++YST +CVK+++G
Sbjct: 69 DTAGQERFRTLTSAYYRGAQGIVYVYDITRRDTFEALAEVWSKEVEMYSTVDECVKIVIG 128
Query: 128 NKVDR----DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
NKVD+ E V+REEG A+E GSLFLECSAKT+ +V + FE+L +ME PSL+
Sbjct: 129 NKVDKAKGGREEGWVTREEGETFARESGSLFLECSAKTKVSVREAFEELVKGVMETPSLM 188
Query: 184 EEGSN 188
EE +N
Sbjct: 189 EETAN 193
>gi|326529385|dbj|BAK01086.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 155
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 115/154 (74%), Positives = 133/154 (86%), Gaps = 1/154 (0%)
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
GK+LKLTIWDTAGQERFRT+TSSYYRGAQGIILVYDV +RE+FTNL DVW KE+D S+
Sbjct: 1 GGKKLKLTIWDTAGQERFRTITSSYYRGAQGIILVYDVAKRESFTNLGDVWTKEIDSNSS 60
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
N+DC+KMLVGNKVD+D ER V+REEG+A A+E G LFLE SAKTRENVE CFE+L LKI+
Sbjct: 61 NKDCIKMLVGNKVDKDDERTVTREEGLAFAQESGCLFLESSAKTRENVENCFEELVLKIL 120
Query: 178 EVPSLLEEG-SNVVKRNILKQKPENQSPPIGGCC 210
EVPSLLEEG S+VVKRNILKQ+ E+ + G CC
Sbjct: 121 EVPSLLEEGSSSVVKRNILKQQQESHAKYGGRCC 154
>gi|384250747|gb|EIE24226.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 200
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/201 (57%), Positives = 148/201 (73%), Gaps = 6/201 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D K+LL+GDS VGKSSLL+ F + + +D ++PTIGVDF++K LTV KRLKLTIWDT
Sbjct: 5 FDYLLKVLLVGDSNVGKSSLLLRFTADTFEDSVAPTIGVDFRLKFLTVNAKRLKLTIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRTLTSSYYRGAQGI+ YDVTRRETF ++ D+W +EVD+YST + VKM+V NK
Sbjct: 65 AGQERFRTLTSSYYRGAQGIVFAYDVTRRETFESIEDIWMREVDMYSTVDNAVKMIVANK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
VD+++ER VSR EG A A++HG LF+E SAK V Q FE+L +KI++ PSLL SN
Sbjct: 125 VDKEAEREVSRAEGAAFARKHGCLFVETSAKANMAVGQAFEELVMKILDTPSLL-TASNS 183
Query: 190 VKRNILKQKPENQSPPIGGCC 210
+ N+ + S CC
Sbjct: 184 SRLNV----GGSNSRTTSSCC 200
>gi|308803965|ref|XP_003079295.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
gi|116057750|emb|CAL53953.1| putative GTP-binding protein RAB1Y (ISS) [Ostreococcus tauri]
Length = 204
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 148/206 (71%), Gaps = 3/206 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
S YD KILL+GDSGVGKSS++ F+S S ++LSPT+GVDFK+K L V GKRLKL
Sbjct: 2 SSDEAPYDHLVKILLVGDSGVGKSSIVTRFVSDSFEELSPTVGVDFKLKRLDVDGKRLKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
T+WDTAGQERFRTLTSSYYRGA G++ VYDVT +F L + W KEVD+Y T + VK+
Sbjct: 62 TVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSAASFAALRETWLKEVDMYGTIESSVKI 121
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++GNK+D+DSER V+REEG+A AKE+G LFLECSAKT+ V + F++L I+E P LL
Sbjct: 122 VIGNKIDKDSERAVTREEGVAFAKENGCLFLECSAKTKVRVAEAFDELVKGILETPGLLV 181
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
+ ++ R L ++ GCC
Sbjct: 182 DSNDGEDRVKLGAYADHAGS---GCC 204
>gi|145346519|ref|XP_001417734.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577962|gb|ABO96027.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 149/208 (71%), Gaps = 7/208 (3%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLK 63
+S + +YD KILL+GDSGVGKSSLL FIS S D+ PT+GVDFK+K + V G RLK
Sbjct: 2 TSDDARAYDHLVKILLVGDSGVGKSSLLARFISDSFDEQGPTVGVDFKLKHVDVDGTRLK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
LT+WDTAGQERFRTLTSSYYRGA G++ VYDVT RE+F N + W KEV++Y T + VK
Sbjct: 62 LTVWDTAGQERFRTLTSSYYRGAHGVVFVYDVTSRESFENARETWRKEVEMYGTIANSVK 121
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+++GNK+DR+ ER V+R+EG+A AKE+G LFLECSAKT+ V + F++L I++ P LL
Sbjct: 122 IVIGNKIDREDERTVARKEGVAFAKEYGCLFLECSAKTKVRVAEAFDELVKGILDAPGLL 181
Query: 184 -EEGSNVVKRNILKQKPENQSPPIGGCC 210
+E + VK + GGCC
Sbjct: 182 VDEVDDGVKLGAYADRAG------GGCC 203
>gi|307111814|gb|EFN60048.1| hypothetical protein CHLNCDRAFT_133281 [Chlorella variabilis]
Length = 202
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 112/199 (56%), Positives = 145/199 (72%), Gaps = 7/199 (3%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAG 71
D +FKILL+GDSGVGKSSLL+ F + ++L PTIGVDFK K++ + GKR++LT+WDTAG
Sbjct: 11 DHTFKILLVGDSGVGKSSLLLRFATGGFEELVPTIGVDFKAKIIELGGKRIRLTVWDTAG 70
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRTLTSSYYRGAQGIILVYDV+R ETF +L+D+W +EVD+Y T ++ VKM+V NK D
Sbjct: 71 QERFRTLTSSYYRGAQGIILVYDVSRAETFDSLADIWLREVDMYGTVEESVKMVVANKTD 130
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVK 191
R VS + G+A A+ HG LF+E SAK VEQ FE+L KI+E PSLL +
Sbjct: 131 LAETREVSTDMGVAFARAHGCLFVETSAKGNVAVEQAFEELVHKILETPSLLASSGSTF- 189
Query: 192 RNILKQKPENQSPPIGGCC 210
+ ++P++ S CC
Sbjct: 190 -GLKTKQPQSSS-----CC 202
>gi|329756970|gb|AEC04741.1| rab18 [Oryza sativa]
Length = 246
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 106/171 (61%), Positives = 136/171 (79%), Gaps = 1/171 (0%)
Query: 40 DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRE 99
D++ PT+GVD K K + GK+ K TIW+ AGQER R SSY RGA +I VYDVT+RE
Sbjct: 4 DEMPPTVGVDCKYKSVRCNGKKRKRTIWEPAGQERCRGGPSSYDRGADAMIAVYDVTKRE 63
Query: 100 TFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSA 159
+ N++DVWAKE+++ +TN++C KMLVGNKVD++ ER+V+REEG+A A+E G LFLE SA
Sbjct: 64 SVANVADVWAKEIEVLATNKECDKMLVGNKVDKNEERMVTREEGLAFAQEAGCLFLESSA 123
Query: 160 KTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
KTRENVE+CFE+LA+K +E PSLLEEGS+V KRN LKQK EN++ GGCC
Sbjct: 124 KTRENVEKCFEELAVKYVESPSLLEEGSSVCKRNALKQKHENKAKN-GGCC 173
>gi|440797100|gb|ELR18195.1| rasrelated protein Rab-18-like, putative [Acanthamoeba castellanii
str. Neff]
Length = 209
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 109/211 (51%), Positives = 145/211 (68%), Gaps = 3/211 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP-TIGVDFKIKLLTVAG 59
M ++G ++ +D FK+L+IGDS VGKSS+L+ F DD P TIGVDFK+K + +
Sbjct: 1 MEGTTGSASHFDHLFKLLIIGDSSVGKSSILLRFTEDEFDDEHPVTIGVDFKVKTIQLGA 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+ LTIWDTAGQE+FR+LTSSYYRG QGIILVYDV+ RE+F +LS VW E+++Y N
Sbjct: 61 KRINLTIWDTAGQEKFRSLTSSYYRGTQGIILVYDVSSRESFQHLS-VWLNEIEMYCNNS 119
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D VK+LV NK+D +R VSREEG+A AK +F+ECSAKT+ ++Q FE+L KI+E
Sbjct: 120 DVVKLLVANKIDL-GDRQVSREEGLAFAKSKAMVFIECSAKTKLGIQQAFEELVTKILET 178
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
PSL E+ + + Q E Q + C
Sbjct: 179 PSLYEKETKATGTVSMNQDSEEQQEGVCSYC 209
>gi|302855274|ref|XP_002959134.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|549810|sp|P36862.1|YPTV3_VOLCA RecName: Full=GTP-binding protein yptV3
gi|409164|gb|AAA34252.1| GTP-binding protein [Volvox carteri]
gi|300255496|gb|EFJ39798.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 203
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
+S+D +FK+LL+GDSGVGKS +L F S ++ + TIGVDFK+K LT GKR KLTIW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L W +E D+YST + +KM+V
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NKVD ++R VS EEG A+ HG LF+E SA+ V Q FE+L LKI++ P LLE +
Sbjct: 124 NKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE--T 181
Query: 188 NVVKRNILKQKPENQSPPIGGC 209
V L P Q + C
Sbjct: 182 TAVGGIKLGAVPTGQQAGVCSC 203
>gi|223973143|gb|ACN30759.1| unknown [Zea mays]
gi|413920115|gb|AFW60047.1| hypothetical protein ZEAMMB73_972006 [Zea mays]
Length = 173
Score = 218 bits (554), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 99/126 (78%), Positives = 115/126 (91%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
Q +D FK+LLIGDSGVGKSSLL+ F + S +DLSPTIGVDFK+K++T+ GK+LKL I
Sbjct: 12 QQPEFDYLFKLLLIGDSGVGKSSLLLRFTADSFEDLSPTIGVDFKVKMVTIGGKKLKLAI 71
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRTLTSSYYRGAQG+I+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLV
Sbjct: 72 WDTAGQERFRTLTSSYYRGAQGVIMVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLV 131
Query: 127 GNKVDR 132
GNKVD+
Sbjct: 132 GNKVDK 137
>gi|414586250|tpg|DAA36821.1| TPA: putative NAC domain transcription factor superfamily protein
[Zea mays]
Length = 160
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 104/160 (65%), Positives = 123/160 (76%), Gaps = 22/160 (13%)
Query: 54 LLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVD 113
++++ GK+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDV+RRETFTNLSD+WAKE+D
Sbjct: 1 MVSIGGKKLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSRRETFTNLSDIWAKEID 60
Query: 114 LYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
LYSTNQDCVKMLVGNKVD++SER V+++EGI A+E+G LFLECSAKT+ NVEQCFE+L
Sbjct: 61 LYSTNQDCVKMLVGNKVDKESERAVTKKEGIEFAREYGCLFLECSAKTKVNVEQCFEELV 120
Query: 174 LK----IMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
LK I VP L + P GGC
Sbjct: 121 LKVCIYIFAVPYL------------------RHAKPPGGC 142
>gi|301100814|ref|XP_002899496.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
gi|262103804|gb|EEY61856.1| Rab18 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 216 bits (550), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
+ YD FK+LLIGD+GVGKSS+L+ F + DD L TIGVDFK+K++ V GK++K+TIW
Sbjct: 2 DGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST--NQDCVKML 125
DTAGQERFRTLTSSYYRGAQGI+LVYDV RR+TF NL D+W +EV++YS +D VK+L
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK+D+ ERVVSR E A+ G LF+E SAKT+ ++Q F ++ KI+E P+LL
Sbjct: 121 VGNKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSN 178
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
+ + L K E +S GCC
Sbjct: 179 TAPRSRGRKLDAKAE-KSGGGNGCC 202
>gi|325186904|emb|CCA21448.1| Rab18 family GTPase putative [Albugo laibachii Nc14]
Length = 201
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 116/204 (56%), Positives = 145/204 (71%), Gaps = 9/204 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYD FKILLIGD+GVGKSS+L+ F D +L TIGVDFK+K++ V R+K+TIWD
Sbjct: 3 SYDHLFKILLIGDAGVGKSSILLRFTDDKFDGNLQSTIGVDFKVKMMQVDSSRIKVTIWD 62
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST--NQDCVKMLV 126
TAGQERFRTLTSSYYRGAQGI+LVYDV+RRETF +L D W +E+++YS +D VK+LV
Sbjct: 63 TAGQERFRTLTSSYYRGAQGIVLVYDVSRRETFESL-DTWLREIEIYSPAGGRDVVKLLV 121
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNKVD+ ER VSR+E A+ G LFLE SAKTR + Q F+++ KI+E PSLL
Sbjct: 122 GNKVDK-QERSVSRKEAEDWARNKGMLFLESSAKTRIGILQVFDEVVQKILENPSLLAST 180
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+ V+ QK N + P G C
Sbjct: 181 APRVR----GQKLSNHTEPAGSVC 200
>gi|348677906|gb|EGZ17723.1| hypothetical protein PHYSODRAFT_314944 [Phytophthora sojae]
Length = 202
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 114/205 (55%), Positives = 148/205 (72%), Gaps = 7/205 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
+ YD FK+LLIGD+GVGKSS+L+ F + DD L TIGVDFK+K++ V GK++K+TIW
Sbjct: 2 DGYDHLFKLLLIGDAGVGKSSMLLRFTDDTFDDNLQSTIGVDFKVKMMQVDGKKIKMTIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST--NQDCVKML 125
DTAGQERFRTLTSSYYRGAQGI+LVYDV RR+TF NL D+W +EV++YS +D VK+L
Sbjct: 62 DTAGQERFRTLTSSYYRGAQGIVLVYDVARRDTFENL-DLWLQEVEVYSPAGGRDVVKLL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK+D+ ERVVSR E A+ G LF+E SAKT+ ++Q F ++ KI+E P+LL
Sbjct: 121 VGNKIDK--ERVVSRREAEDWARSKGMLFVESSAKTKIGIQQVFNEVVQKILENPALLSN 178
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
+ + L K E +S GCC
Sbjct: 179 TAPRSRGRKLDGKAE-KSGGGSGCC 202
>gi|320167405|gb|EFW44304.1| GTP-binding protein yptV3 [Capsaspora owczarzaki ATCC 30864]
Length = 205
Score = 215 bits (548), Expect = 7e-54, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 136/188 (72%), Gaps = 3/188 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+FK+LL+G+S GKSSL++ F + D DLS TIGVDFK+K + + +KLTIWDTAGQ
Sbjct: 10 TFKLLLVGESNTGKSSLIMRFTDNVFDEDLSATIGVDFKVKQMFLNDTTIKLTIWDTAGQ 69
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLTSS+YRGA G+I VYDVTRRETF D W EVD Y+TN D VKML+GNK+D+
Sbjct: 70 ERFRTLTSSFYRGAHGVIFVYDVTRRETFDTALDTWLTEVDTYATN-DVVKMLIGNKIDQ 128
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG-SNVVK 191
ER VSR EG+A A+ H LF+ECSA+TR VEQ FE+L K+ + P+L G +N V+
Sbjct: 129 TEERQVSRAEGLAFAQRHSMLFIECSARTRVGVEQAFEELVQKMYDTPALWRTGPTNNVQ 188
Query: 192 RNILKQKP 199
++ P
Sbjct: 189 LGGAEEAP 196
>gi|412988755|emb|CCO15346.1| unknown [Bathycoccus prasinos]
Length = 225
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 105/180 (58%), Positives = 139/180 (77%), Gaps = 4/180 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVD--DLSPTIGVDFKIKL--LTVAGKRLKLTI 66
Y K+LL+GDSGVGKSSLL FI D D+S TIGVDFK+K L + +KLT+
Sbjct: 14 YSHLIKVLLVGDSGVGKSSLLSRFIDPDTDLEDISTTIGVDFKLKYVKLKQTNETVKLTV 73
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRTLTSSYYRGAQGI+ VYD++ +E+F ++ +VW KEVD+YST D +K++V
Sbjct: 74 WDTAGQERFRTLTSSYYRGAQGIVFVYDISSKESFESVENVWQKEVDMYSTIPDAIKIVV 133
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNKVD+++ER V +E+ IA A+ +G LFLECSAKTR +V++ F++L I+E PSLL++G
Sbjct: 134 GNKVDKENERKVKKEDAIAFARRNGCLFLECSAKTRVSVKEIFDELLQAIVETPSLLKDG 193
>gi|428165742|gb|EKX34731.1| hypothetical protein GUITHDRAFT_175416 [Guillardia theta CCMP2712]
Length = 201
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 139/190 (73%), Gaps = 6/190 (3%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
+S+++D FK+LL GDSGVGKSS+L+ F S D TIGVDFK+K + V GK++KLT
Sbjct: 4 ESDAFDHRFKLLLTGDSGVGKSSILLRFTDDSFATDQPATIGVDFKVKSIDVEGKKVKLT 63
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRTLTSSYYRGAQG+ILVYDVTR+ETF NL W KEVD+Y+ VK+L
Sbjct: 64 IWDTAGQERFRTLTSSYYRGAQGVILVYDVTRKETFENLEQ-WLKEVDMYTNRDGVVKLL 122
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK+D+ + R V+R +GI A+ G LF+ECSAK + ++Q FE+L KI++ P L+
Sbjct: 123 VGNKIDK-ANREVTRADGIEFARNRGMLFIECSAKAKTGIQQAFEELVQKILDSPHLVNN 181
Query: 186 ---GSNVVKR 192
G N+ R
Sbjct: 182 EVSGLNLASR 191
>gi|159478503|ref|XP_001697342.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158274500|gb|EDP00282.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 202
Score = 215 bits (547), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 104/177 (58%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
+++D +FK+LL+GDSGVGKS +L F S S ++ + TIGVDFK+K L GKR KLT+W
Sbjct: 3 DTHDYTFKVLLVGDSGVGKSCILTRFTSGSFEENTTSTIGVDFKVKYLEAEGKRCKLTVW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTSSYYRGAQGII VYDVTRRETF L W +E D+YST + ++M+V
Sbjct: 63 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRETFEALEGAWMREWDMYSTVEGAIQMVVA 122
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
NK D DS R V+ +EG A+ HG LF+E SAK V Q FE+L KI++ P+LLE
Sbjct: 123 NKTDLDSARQVATQEGHDFARRHGCLFVETSAKGNVAVGQAFEELLAKILDTPALLE 179
>gi|340375152|ref|XP_003386101.1| PREDICTED: ras-related protein Rab-18-B-like [Amphimedon
queenslandica]
Length = 201
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 109/200 (54%), Positives = 147/200 (73%), Gaps = 6/200 (3%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D+S KIL+IGDSGVGKSSLL+ F++++ D D + TIGVDFK+K + +AGKR+KL IWDTA
Sbjct: 3 DVSLKILIIGDSGVGKSSLLLRFVNNTFDPDQASTIGVDFKVKTVQLAGKRVKLAIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLT +YYRGAQG+ILVYDV +TF L +VW E+D Y+T +D VKMLVGNK+
Sbjct: 63 GQERFRTLTPAYYRGAQGVILVYDVCLPDTFEGL-EVWLNELDTYATKKDLVKMLVGNKI 121
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D+ +ER +SR +G+ A+ + LF+E SAKTR+ V++ FE+L KI++ P L E ++ V
Sbjct: 122 DK-TERKISRADGLQFARRNSMLFIESSAKTRDGVQEAFEELVQKILQNPDLYTENTSTV 180
Query: 191 KRNILKQKPENQSPP-IGGC 209
N+ PP + GC
Sbjct: 181 --NVSSNPSSGSEPPSLCGC 198
>gi|213515510|ref|NP_001133260.1| Ras-related protein Rab-18 [Salmo salar]
gi|209148105|gb|ACI32921.1| Ras-related protein Rab-18 [Salmo salar]
Length = 206
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 141/200 (70%), Gaps = 5/200 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K + V G KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAVDGNSAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTKRDTFTRLEN-WLNELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ RVV R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E SN R
Sbjct: 127 EENRVVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWE--SNAQPR 184
Query: 193 NI-LKQKPENQSPPIGGCCS 211
+ L + + + GG CS
Sbjct: 185 GVQLGDQEQRGAGGCGGYCS 204
>gi|298712751|emb|CBJ33348.1| Rab18, RAB family GTPase [Ectocarpus siliculosus]
Length = 210
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 111/210 (52%), Positives = 146/210 (69%), Gaps = 6/210 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRL 62
++ Q+ YD FK+LL+GD+ VGKSS+++ F + DD L TIGVDFK+K++ GKR+
Sbjct: 2 TTRQAEPYDHLFKLLLVGDAAVGKSSIMLRFTDDTFDDHLQSTIGVDFKVKMVDAGGKRI 61
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST--NQD 120
K+TIWDTAGQERFRTLTSSYYRGAQGI+LVYDVTR ETF NLS W +EV+ Y ++
Sbjct: 62 KMTIWDTAGQERFRTLTSSYYRGAQGIMLVYDVTRPETFDNLSK-WLEEVETYHPGRGRE 120
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
VK+LVGNKVD+ ERVV+R + A+ G LFLE SAKT+ V+Q FE++ KI++ P
Sbjct: 121 VVKLLVGNKVDK--ERVVTRAQAEEYARSKGMLFLEASAKTKVGVKQVFEEVVQKILDNP 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
SLL + R+ + N + GG C
Sbjct: 179 SLLANTAPGRPRDTVDPSRPNPNQAGGGLC 208
>gi|225711468|gb|ACO11580.1| Ras-related protein Rab-18 [Caligus rogercresseyi]
Length = 211
Score = 211 bits (537), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 109/198 (55%), Positives = 138/198 (69%), Gaps = 3/198 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
S K+L+IG+SGVGKSSLL+ F + D + S TIGVDFK+K +TV G R+KL IWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRG QG ILVYDVT RE+F+N+ + W E+D Y+TN D VKMLVGNK D
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTSRESFSNVEN-WLNELDTYTTNHDIVKMLVGNKCDL 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ +RVVS+EEG A++H +F+E SAKTRE V+ FE+L I++ P L E ++
Sbjct: 128 EDKRVVSKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEAANSAGGI 187
Query: 193 NILKQKPENQSPPIGGCC 210
N+ K N S C
Sbjct: 188 NV-KSDNNNASGDSQSCA 204
>gi|410933135|ref|XP_003979947.1| PREDICTED: ras-related protein Rab-18-like isoform 2 [Takifugu
rubripes]
Length = 205
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 137/199 (68%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D D + TIGVDFK+K +TV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTR+ETFT L D W E++ Y T D VKMLVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDR 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L + S R
Sbjct: 127 EENREVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQ--SEKHGR 184
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + GG CS
Sbjct: 185 GVQLTDEDAGGGTCGGYCS 203
>gi|51010979|ref|NP_001003449.1| ras-related protein Rab-18-B [Danio rerio]
gi|82183235|sp|Q6DHC1.1|RB18B_DANRE RecName: Full=Ras-related protein Rab-18-B; Flags: Precursor
gi|50370256|gb|AAH76054.1| RAB18B, member RAS oncogene family [Danio rerio]
Length = 205
Score = 210 bits (534), Expect = 3e-52, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 139/199 (69%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K + + G R KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D+ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E
Sbjct: 127 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGV 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ +P+ Q GG CS
Sbjct: 186 QLSDNEPQRQG-ACGGYCS 203
>gi|198429489|ref|XP_002131370.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 2
[Ciona intestinalis]
gi|198429491|ref|XP_002131333.1| PREDICTED: similar to RAB18, member RAS oncogene family isoform 1
[Ciona intestinalis]
Length = 200
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 106/172 (61%), Positives = 132/172 (76%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IGDSGVGKSSLL+ F D D S TIGVDFK+K LTV G +KL IWDTAGQ
Sbjct: 8 TLKILIIGDSGVGKSSLLLRFTDDRFDPDQSATIGVDFKVKSLTVEGNTVKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYD TR+++F++LS W EV+ YST + VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVIFVYDCTRKDSFSHLS-TWLTEVETYSTKPNIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ RVV+REEG+ A++H LF+E SAKTR+ VE FE+L KI++ P L E
Sbjct: 127 EN-RVVTREEGLKFARKHSMLFIEASAKTRDGVECAFEELVEKIIQTPGLWE 177
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 209 bits (533), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 109/180 (60%), Positives = 136/180 (75%), Gaps = 6/180 (3%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLT 65
+ YD FK+LLIGD+GVGKSS+L+ F + DD TIGVDFK+K++ V KR+K+T
Sbjct: 42 EPEPYDHLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMT 101
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST--NQDCVK 123
IWDTAGQERFRTLTSSYYRGAQGIILVYDV RRE+F NL+ W +EV++YST ++ VK
Sbjct: 102 IWDTAGQERFRTLTSSYYRGAQGIILVYDVNRRESFENLNH-WLQEVEVYSTGGGREIVK 160
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNKVD+ ER+V REE A A+ G LFLE SAKTR + Q F ++ KI++ PSLL
Sbjct: 161 VLVGNKVDK--ERMVPREEAEAWARSKGMLFLEASAKTRTGIRQVFLEVVQKILDNPSLL 218
>gi|397635930|gb|EJK72074.1| hypothetical protein THAOC_06432 [Thalassiosira oceanica]
Length = 224
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 106/191 (55%), Positives = 138/191 (72%), Gaps = 9/191 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAG 59
M SS Q+ YD FK+L+IGD+ VGKSS+L+ F + D+ + TIGVDFK+K L +
Sbjct: 1 MASSRPQAFPYDHLFKLLMIGDAAVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNS 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN- 118
KR+KLT+WDTAGQERFRTLTSSYYRGAQG+++VYDVTRR++F NL D W KE+ LYS N
Sbjct: 61 KRIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-DHWLKEIQLYSPNS 119
Query: 119 -QDCVKMLVGNKVD-----RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQL 172
+ VK+LVGNK+D + ER V R+E A+EHG LFLE SAKT+ +++ F ++
Sbjct: 120 GEGVVKLLVGNKIDLPEMGGEHERQVDRDEAEEWAREHGMLFLEASAKTKAGIQESFMEV 179
Query: 173 ALKIMEVPSLL 183
KI+E P LL
Sbjct: 180 VYKILEDPDLL 190
>gi|356514705|ref|XP_003526044.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABC1-like
[Glycine max]
Length = 137
Score = 209 bits (532), Expect = 5e-52, Method: Compositional matrix adjust.
Identities = 98/132 (74%), Positives = 116/132 (87%), Gaps = 1/132 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SS G +D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K +T+ GK
Sbjct: 1 MDSSXGH-QEFDYLFKLLMIGDSGVGKSSLLLSFTSDAFEDLSPTIGVDFKVKYVTMGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL ++WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLFEIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDR 132
+KMLVGNK+D+
Sbjct: 120 YIKMLVGNKLDK 131
>gi|384485982|gb|EIE78162.1| hypothetical protein RO3G_02866 [Rhizopus delemar RA 99-880]
Length = 203
Score = 209 bits (532), Expect = 6e-52, Method: Compositional matrix adjust.
Identities = 108/193 (55%), Positives = 143/193 (74%), Gaps = 6/193 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ K+LLIG+S VGKSSLL+ F + +++S TIGVDFK+ ++ V K KLTIWDTA
Sbjct: 7 TLKLLLIGNSNVGKSSLLLRFTDDTFLPQEEVSATIGVDFKVSMMDVNDKTYKLTIWDTA 66
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQG+ILVYDV+ RETF L++ W EV+ Y ++ D VKM+VGNKV
Sbjct: 67 GQERFRTLTSSYYRGAQGVILVYDVSNRETFDALNN-WWNEVNTYCSSPDVVKMIVGNKV 125
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D++S RVVS EEG+ A++ +LF+ECSAKT+ V+Q FE+L KI+E PSL ++ N
Sbjct: 126 DKESSRVVSYEEGLNFARKLQTLFVECSAKTKVGVKQAFEELVEKIIETPSLWQK--NTT 183
Query: 191 KRNILKQKPENQS 203
+K + EN+S
Sbjct: 184 NSTSIKVEQENES 196
>gi|89258427|gb|ABD65437.1| Rab18 [Suberites domuncula]
Length = 202
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 101/171 (59%), Positives = 132/171 (77%), Gaps = 2/171 (1%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAG 71
+S K+L+IGDSG GKSSLL+ F + + D D+S TIGVDFK+K L + KR KL+IWDTAG
Sbjct: 4 VSLKLLIIGDSGAGKSSLLLRFTNDTFDPDVSATIGVDFKVKTLVLDEKRTKLSIWDTAG 63
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRTLT SYYRGAQG+ILVYD + RE+F L +VW E+D Y+T +D +KMLV NK+D
Sbjct: 64 QERFRTLTPSYYRGAQGVILVYDASSRESFEGL-EVWLNELDTYATKKDLIKMLVANKID 122
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
+ SER VSR +G+ A+ + LF+E SAKTR+ V++ FE+L KI++ PSL
Sbjct: 123 KTSERQVSRSDGLQFARRNSMLFIEASAKTRDGVQEAFEELVHKILQTPSL 173
>gi|290561625|gb|ADD38212.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
S K+L+IG+SGVGKSSLL+ F + D D S TIGVDFK+K LTV G R+KL IWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRG QG ILVYDVT R++F+N+ + W E+D Y+TN D VKMLVGNK D
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDL 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+ +R +S+EEG A++H +F+E SAKTRE V+ FE+L I++ P L E
Sbjct: 128 EEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPELWE 179
>gi|225712132|gb|ACO11912.1| Ras-related protein Rab-18 [Lepeophtheirus salmonis]
gi|290462753|gb|ADD24424.1| Ras-related protein Rab-18-B [Lepeophtheirus salmonis]
Length = 204
Score = 209 bits (531), Expect = 8e-52, Method: Compositional matrix adjust.
Identities = 103/172 (59%), Positives = 129/172 (75%), Gaps = 2/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
S K+L+IG+SGVGKSSLL+ F + D D S TIGVDFK+K LTV G R+KL IWDTAGQ
Sbjct: 9 SLKLLIIGESGVGKSSLLLRFTEDAFDPDHSATIGVDFKVKTLTVQGNRVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRG QG ILVYDVT R++F+N+ + W E+D Y+TN D VKMLVGNK D
Sbjct: 69 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATNHDIVKMLVGNKCDL 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+ +R +S+EEG A++H +F+E SAKTRE V+ FE+L I++ P L E
Sbjct: 128 EEKRAISKEEGQKCARKHRMMFIESSAKTREGVQLAFEELVENIIQTPELWE 179
>gi|47228002|emb|CAF97631.1| unnamed protein product [Tetraodon nigroviridis]
Length = 205
Score = 209 bits (531), Expect = 9e-52, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 140/199 (70%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG+SGVGKSSLL+ F D +L+ TIGVDFK+K L + G R KL IWDTAGQ
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTDDMFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVT+R+TF L + W E++ Y++ + VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTKRDTFAKLEN-WLNELETYTSRNNLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D +R V R EG+ A++H LF+E SAKT++ V+ FE+L KI++ P L E S +
Sbjct: 127 D-DREVDRHEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESDSPGQRL 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ +Q+ + GG CS
Sbjct: 186 QLTEQQQQGGGRACGGYCS 204
>gi|45592944|ref|NP_996661.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|40807131|gb|AAH65318.1| RAB18A, member RAS oncogene family [Danio rerio]
gi|157422871|gb|AAI53661.1| RAB18A, member RAS oncogene family [Danio rerio]
Length = 205
Score = 208 bits (529), Expect = 1e-51, Method: Compositional matrix adjust.
Identities = 111/200 (55%), Positives = 139/200 (69%), Gaps = 6/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D ++ TIGVDFK+K L V G R KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDAEIGATIGVDFKVKTLAVDGNRAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+RRETF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSRRETFAKL-DNWLSELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D +R + REEG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E S R
Sbjct: 127 D-DREIEREEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKILQTPGLWE--SMHKSR 183
Query: 193 NI-LKQKPENQSPPIGGCCS 211
+ L + E+ G CS
Sbjct: 184 GVALSELSESSQGGCGAYCS 203
>gi|62859745|ref|NP_001017281.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267454|emb|CAJ81541.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134026214|gb|AAI35987.1| RAB18, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 206
Score = 207 bits (528), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
++ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E +N
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESETN 181
>gi|159479896|ref|XP_001698022.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|158273821|gb|EDO99607.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 210
Score = 207 bits (527), Expect = 2e-51, Method: Compositional matrix adjust.
Identities = 102/180 (56%), Positives = 131/180 (72%), Gaps = 1/180 (0%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLT 65
Q S DL+ KILL+GDSGVGK+ LL F S DD ++ TIGVDF +K ++V KR+KLT
Sbjct: 6 QEGSVDLTLKILLLGDSGVGKTCLLTRFAHDSFDDKVASTIGVDFAVKRMSVYDKRVKLT 65
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
+WDTAGQE+FRTLTS++YRGA+GIILVYDV+R +T +L + W +E+++Y T D V+M+
Sbjct: 66 VWDTAGQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELEMYGTESDAVRMV 125
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
V NKVD R VS EG A+ HG LF+E SAKT V FE+L LKI+E PSLLE+
Sbjct: 126 VANKVDVGEARRVSWHEGSDFARRHGCLFVETSAKTNVAVANAFEELVLKILETPSLLED 185
>gi|223996783|ref|XP_002288065.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220977181|gb|EED95508.1| at-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 197
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 135/190 (71%), Gaps = 10/190 (5%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGK 60
GSS GQS YD FK+L+IGD+GVGKSS+L+ F + D+ + TIGVDFK+K L + K
Sbjct: 9 GSSKGQSFPYDHLFKLLMIGDAGVGKSSMLIRFTDDAFDEHIQSTIGVDFKVKHLELNNK 68
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN-- 118
R+KLT+WDTAGQERFRTLTSSYYRGAQG+++VYDVTRR++F NL + W KEV LYS N
Sbjct: 69 RIKLTVWDTAGQERFRTLTSSYYRGAQGVVMVYDVTRRDSFDNL-EQWLKEVKLYSPNNG 127
Query: 119 QDCVKMLVGNKVD------RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQL 172
+ VK+LVGNK+D ER V R E A+ G LFLE SAKTR V++ F ++
Sbjct: 128 EGVVKLLVGNKIDLADGDGSGYERQVDRHEAEEWARNQGMLFLEASAKTRMGVQESFMEV 187
Query: 173 ALKIMEVPSL 182
KI+E P L
Sbjct: 188 VHKILEDPDL 197
>gi|47225130|emb|CAF98757.1| unnamed protein product [Tetraodon nigroviridis]
Length = 204
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 137/199 (68%), Gaps = 5/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D D + TIGVDFK+K LTV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTLTVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRRETFT L D W E++ Y T D VKMLVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDR 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ V + EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L + S R
Sbjct: 127 ENHE-VEKPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQ--SEKHGR 183
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + GG CS
Sbjct: 184 GVQLSDEDAGGGTCGGYCS 202
>gi|348531663|ref|XP_003453328.1| PREDICTED: ras-related protein Rab-18-B-like [Oreochromis
niloticus]
Length = 205
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 142/200 (71%), Gaps = 6/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG+SGVGKSSLL+ F + D + S TIGVDFK+K L + G + KL IWDTAGQ
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W E++ Y+T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYTTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D +R V R EG+ A++H LF+E SAKT++ V+ FE+L KI++ P L E + K
Sbjct: 127 D-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESENQGQKV 185
Query: 193 NILKQKPENQSPPI-GGCCS 211
+ Q E+ P + GG CS
Sbjct: 186 RLGDQ--EHARPGVCGGYCS 203
>gi|410924888|ref|XP_003975913.1| PREDICTED: ras-related protein Rab-18-B-like [Takifugu rubripes]
Length = 205
Score = 206 bits (525), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 107/199 (53%), Positives = 141/199 (70%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K L + G R KL IWDTAGQ
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTLAIDGNRAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+RR+TF L + W E++ Y+T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSRRDTFVKLEN-WLNELETYTTRMDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D +R V R EG+ A++H LF+E SAKT++ V+ FE+L KI++ P L E N +R
Sbjct: 127 D-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLW-ESDNTGQR 184
Query: 193 NILKQKPENQSPPIGGCCS 211
L ++ + GG CS
Sbjct: 185 LQLGEQQQGGGRACGGYCS 203
>gi|395539893|ref|XP_003771898.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Sarcophilus
harrisii]
Length = 205
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 139/199 (69%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E N K
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLW-ESENQNKG 184
Query: 193 NILKQKPENQSPPIGGCCS 211
L + E+ GG CS
Sbjct: 185 VRLSHREESHGGACGGYCS 203
>gi|126341216|ref|XP_001367066.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 205
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 109/199 (54%), Positives = 139/199 (69%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLSELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E N K
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLW-ESENQNKG 184
Query: 193 NILKQKPENQSPPIGGCCS 211
L + E+ GG CS
Sbjct: 185 VRLSHREESHGGACGGYCS 203
>gi|410933133|ref|XP_003979946.1| PREDICTED: ras-related protein Rab-18-like isoform 1 [Takifugu
rubripes]
Length = 204
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/199 (55%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D D + TIGVDFK+K +TV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPDQAATIGVDFKVKTITVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTR+ETFT L D W E++ Y T D VKMLVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRQETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDR 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L + S R
Sbjct: 127 EN-REVERPEGLKFARKHSMLFIESSAKTRDGVQCAFEELVEKIIQTPGLWQ--SEKHGR 183
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + GG CS
Sbjct: 184 GVQLTDEDAGGGTCGGYCS 202
>gi|221127104|ref|XP_002163996.1| PREDICTED: ras-related protein Rab-18-like [Hydra magnipapillata]
Length = 204
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 140/200 (70%), Gaps = 7/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D D+ TIGVDFK+K + V G R+KL +WDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLIRFTDDTFDQDIGATIGVDFKVKTVEVDGNRMKLALWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+ R+TF L+D W E + Y+T QD VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSVRQTFDKLND-WLNECETYATKQDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE-EGSNVVK 191
R V+R+EG+ A+ H LF+E SAKT++ VE FE+L KI++ P L E E + +
Sbjct: 127 PG-RQVTRQEGLQFARRHSMLFIEASAKTKDGVECAFEELVEKILQTPGLWEKESKSTIG 185
Query: 192 RNILKQKPENQSPPIGGCCS 211
+I+ P + G CS
Sbjct: 186 LSIV---PAGNASSCYGSCS 202
>gi|148224120|ref|NP_001079868.1| uncharacterized protein LOC379558 [Xenopus laevis]
gi|33416686|gb|AAH56054.1| MGC69017 protein [Xenopus laevis]
Length = 205
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 133/176 (75%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
++ R V R EG+ A++H L++E SAKTR+ V+ FE+L KI++ P L E +N
Sbjct: 127 EN-REVDRNEGLKFARKHSMLYIEASAKTRDGVQCAFEELVEKIIQTPGLWESETN 181
>gi|34068436|gb|AAQ56773.1| ras-related GTP-binding protein Rab18 [Pelophylax ridibundus]
Length = 205
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKAKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFARL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D+ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E S+
Sbjct: 127 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESESH 181
>gi|147900430|ref|NP_001084300.1| RAB18, member RAS oncogene family [Xenopus laevis]
gi|49256207|gb|AAH74233.1| RAB18 protein [Xenopus laevis]
Length = 206
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV RR+TFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
++ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E +N
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESETN 181
>gi|221487606|gb|EEE25838.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 212
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAG 59
M +G+ SYD K+LLIGDSGVGKSS+L+ F ++ TIGVDFK+K +TV
Sbjct: 1 MHGRAGEPASYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGD 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
RLKL IWDTAGQERFRTLTSSYYRGAQGII+VYDV+ R++F NL W E+ YSTN
Sbjct: 61 MRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNA 119
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D V MLV NKVD+ + + V R EG A A + G LF+E SAKTR+ V+ FE+L KI++
Sbjct: 120 DAVLMLVANKVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLL 183
PSLL
Sbjct: 179 PSLL 182
>gi|156388137|ref|XP_001634558.1| predicted protein [Nematostella vectensis]
gi|156221642|gb|EDO42495.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 129/172 (75%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL++G+SGVGKSSLL+ F + D D+ TIGVDFK+K LTV G + KL IWDTAGQ
Sbjct: 8 TLKILIVGESGVGKSSLLLRFTDDTFDPDIGATIGVDFKVKTLTVEGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYD RETF L + W EV++YST +D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDTNSRETFDKLEE-WLNEVEMYSTKKDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R++G+ A+ H LF+E SA+T+E V+ FE+L KI++ P L E
Sbjct: 127 NN-REVDRKQGLQFARRHSMLFIEASARTKEGVQLAFEELVEKIIQTPGLWE 177
>gi|387017928|gb|AFJ51082.1| ras-related protein Rab-18-like [Crotalus adamanteus]
Length = 205
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 110/200 (55%), Positives = 140/200 (70%), Gaps = 6/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F ++ D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFTKL-DNWLTELETYCTRYDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S R
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQ--NR 183
Query: 193 NI-LKQKPENQSPPIGGCCS 211
+ L E GG CS
Sbjct: 184 GVKLSNTEEGYRGACGGYCS 203
>gi|27882648|gb|AAH43996.1| RAB18 protein, partial [Xenopus laevis]
Length = 212
Score = 204 bits (520), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 103/176 (58%), Positives = 131/176 (74%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G KL IWDTAGQ
Sbjct: 14 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNNAKLAIWDTAGQ 73
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV RR+TFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 74 ERFRTLTPSYYRGAQGVILVYDVARRDTFTRL-DNWLNELETYCTRNDIVKMLVGNKIDK 132
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
++ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E +N
Sbjct: 133 EN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWESETN 187
>gi|302828392|ref|XP_002945763.1| RabC/Rab18 [Volvox carteri f. nagariensis]
gi|300268578|gb|EFJ52758.1| RabC/Rab18 [Volvox carteri f. nagariensis]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 101/176 (57%), Positives = 129/176 (73%), Gaps = 1/176 (0%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D + KILL+GDSGVGK+SLL F S D+ ++ TIGVDF +K L+V KR+KLT+WDTA
Sbjct: 13 DFTIKILLLGDSGVGKTSLLTRFAHDSFDEKVASTIGVDFAVKKLSVYDKRVKLTVWDTA 72
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQE+FRTLTS++YRGA+GIILVYDV+R +T +L + W +E++LY T D V+M+V NKV
Sbjct: 73 GQEKFRTLTSTFYRGAKGIILVYDVSRPDTLRHLEEQWMRELELYGTEADAVRMVVANKV 132
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
D R VS EG A+ HG LF+E SAKT V FE+L LKI+E PSLLE+
Sbjct: 133 DVGDARRVSWHEGSDFARRHGCLFVETSAKTNIAVANAFEELVLKILETPSLLEDA 188
>gi|237830465|ref|XP_002364530.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211962194|gb|EEA97389.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221507403|gb|EEE33007.1| rab5, putative [Toxoplasma gondii VEG]
Length = 212
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 131/184 (71%), Gaps = 3/184 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAG 59
M +G+ SYD K+LLIGDSGVGKSS+L+ F ++ TIGVDFK+K +TV
Sbjct: 1 MHGRAGEPASYDHLLKLLLIGDSGVGKSSILLRFAEDVFNEKQLSTIGVDFKVKAMTVGD 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
RLKL IWDTAGQERFRTLTSSYYRGAQGII+VYDV+ R++F NL W E+ YSTN
Sbjct: 61 MRLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLNLQS-WLDEIYRYSTNA 119
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D V MLV NKVD+ + + V R EG A A + G LF+E SAKTR+ V+ FE+L KI++
Sbjct: 120 DAVLMLVSNKVDKRTVQ-VERREGEAFAFQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLL 183
PSLL
Sbjct: 179 PSLL 182
>gi|324523684|gb|ADY48284.1| Ras-related protein Rab-18 [Ascaris suum]
Length = 200
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 107/197 (54%), Positives = 135/197 (68%), Gaps = 8/197 (4%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSL++ F+ + D ++S TIGVDF++ TV G R+KL IWDTAGQ
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDTFDPEISATIGVDFRVTSRTVDGNRVKLAIWDTAGQ 70
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYDVT R +F L D W EVD YST + +KMLVGNK+D+
Sbjct: 71 ERFRTLTPSYYRGAQGVICVYDVTNRCSFERL-DHWMNEVDTYSTKNNAIKMLVGNKIDK 129
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
S RV++REEG+ AK H LF+E SAKTRE V+ FE+L K+++ P L E R
Sbjct: 130 TS-RVITREEGLQFAKRHRMLFIEASAKTREGVQCAFEELIEKVIQTPGLWES-----DR 183
Query: 193 NILKQKPENQSPPIGGC 209
+ NQ GC
Sbjct: 184 SGFALGTANQDAGTCGC 200
>gi|219116893|ref|XP_002179241.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409132|gb|EEC49064.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 213
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 112/218 (51%), Positives = 142/218 (65%), Gaps = 13/218 (5%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAG 59
M + Q+ YD FK+L+IGD+ VGKSS+L+ F S D+ + TIGVDFK+K L V G
Sbjct: 1 MAAPPPQTFPYDYLFKVLIIGDASVGKSSMLLRFTDDSFDEHIQSTIGVDFKVKHLEVEG 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS--T 117
KR+KLTIWDTAGQERFRTLTSSYYRGA G++LVYDVTR ++F NL W KEV +YS
Sbjct: 61 KRVKLTIWDTAGQERFRTLTSSYYRGAHGVVLVYDVTRTDSFENLQQ-WLKEVQMYSPGN 119
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+ VK+LVGNK D ER V EE A A+ G LFLE SAKTR + Q F ++ K++
Sbjct: 120 GESVVKLLVGNKCDL--ERQVPFEEADAWARSQGMLFLEASAKTRLGIRQVFTEVVKKML 177
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPI-----GGCC 210
E P L + V R ++ KP++ P + GCC
Sbjct: 178 ENPETL--ATAVPGRPKVQIKPQHARPNMMDDEESGCC 213
>gi|401411617|ref|XP_003885256.1| Rab1-prov protein, related [Neospora caninum Liverpool]
gi|325119675|emb|CBZ55228.1| Rab1-prov protein, related [Neospora caninum Liverpool]
Length = 212
Score = 204 bits (518), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 108/190 (56%), Positives = 133/190 (70%), Gaps = 3/190 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAG 59
M +G + SYD K+LLIGDSGVGKSS+L+ F ++ TIGVDFK+K +TV
Sbjct: 1 MQVPAGATASYDHLLKLLLIGDSGVGKSSILLRFSEDVFNEKQLSTIGVDFKVKAITVGD 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
RLKL IWDTAGQERFRTLTSSYYRGAQGII+VYDV+ R++F +L W E+ YSTN
Sbjct: 61 ARLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVSNRQSFLDLQS-WLDEIYRYSTNA 119
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D V MLV NK+D+ + V R EG A A + G LF+E SAKTR+ V+ FE+L KI++
Sbjct: 120 DAVIMLVANKIDKRTVE-VERREGEAFAYQKGMLFVETSAKTRQGVDHAFEELVQKILDT 178
Query: 180 PSLLEEGSNV 189
PSLLE S V
Sbjct: 179 PSLLENTSPV 188
>gi|432913216|ref|XP_004078963.1| PREDICTED: ras-related protein Rab-18-B-like [Oryzias latipes]
Length = 205
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 139/200 (69%), Gaps = 6/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG+SGVGKSSLL+ F + D + S TIGVDFK+K L + G + KL IWDTAGQ
Sbjct: 8 TLKLLIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTLAIEGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+RR++FT L + W E++ Y+T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSRRDSFTKLEN-WLNELETYTTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE-EGSNVVK 191
D +R V R EG+ A++H LF+E SAKT++ V+ FE+L KI++ P L E EG
Sbjct: 127 D-DREVDRNEGLKFARKHSMLFIEASAKTKDGVQCAFEELVEKILQTPGLWESEGPG--H 183
Query: 192 RNILKQKPENQSPPIGGCCS 211
R L + GG CS
Sbjct: 184 RVQLGSPDQAGGRACGGYCS 203
>gi|432926809|ref|XP_004080935.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-18-like
[Oryzias latipes]
Length = 204
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 100/168 (59%), Positives = 128/168 (76%), Gaps = 3/168 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D + S TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRRETFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLNELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
+S V R EG+ A++H +LF+E SAKT++ V+ FE+L K+++ P
Sbjct: 127 ESHE-VDRAEGLKFARKHSTLFIEASAKTKDGVQCAFEELVEKVIQTP 173
>gi|317419712|emb|CBN81748.1| Ras-related protein Rab-18 [Dicentrarchus labrax]
Length = 204
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 102/176 (57%), Positives = 130/176 (73%), Gaps = 3/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D + + TIGVDFK+K +TV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTITVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRRETF L D W E++ Y T D VKMLVGNK+DR
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRETFAKL-DNWLNELETYCTRNDLVKMLVGNKIDR 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
++ + R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L + S+
Sbjct: 127 ENHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSESH 181
>gi|327271994|ref|XP_003220771.1| PREDICTED: ras-related protein Rab-18-like [Anolis carolinensis]
Length = 205
Score = 202 bits (515), Expect = 6e-50, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 138/200 (69%), Gaps = 6/200 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFAKL-DNWLTELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S R
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESESQ--NR 183
Query: 193 NI-LKQKPENQSPPIGGCCS 211
+ L + GG CS
Sbjct: 184 GVKLSNDEDGHRGACGGYCS 203
>gi|348525554|ref|XP_003450287.1| PREDICTED: ras-related protein Rab-18-like [Oreochromis niloticus]
Length = 204
Score = 202 bits (514), Expect = 7e-50, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 5/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D + S TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDTFDPEQSATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRRETFT L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRETFTKL-DNWLSELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ + R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L + ++ R
Sbjct: 127 ENHE-LDRAEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWQSENH--GR 183
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + GG CS
Sbjct: 184 AVQLTDEDAGGGTCGGYCS 202
>gi|296531381|ref|NP_001171837.1| ras-related protein Rab-18-like [Saccoglossus kowalevskii]
Length = 207
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 129/175 (73%), Gaps = 3/175 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVDDLSP-TIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D P TIGVDFK+K L+V G KL IWDTAGQ
Sbjct: 10 TLKILIIGESGVGKSSLLLRFTDDTFDPEQPATIGVDFKVKTLSVEGNTTKLAIWDTAGQ 69
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+ R++F L D+W E++ +ST D VKMLVGNK+D
Sbjct: 70 ERFRTLTPSYYRGAQGVILVYDVSNRKSFQKL-DMWLNELETFSTKSDIVKMLVGNKIDM 128
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
D +R V R+EG+ A++H LF+E SAKT+E V+ FE+L K+++ P L E S
Sbjct: 129 D-KREVDRQEGLKFARKHAMLFIEASAKTKEGVQVAFEELVEKVIQTPGLWENDS 182
>gi|294888082|ref|XP_002772341.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
gi|239876460|gb|EER04157.1| Rab18 GTPase, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 105/176 (59%), Positives = 130/176 (73%), Gaps = 2/176 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWD 68
+YD FK+L+IGDSGVGKS LL+ F +D TIGVDFK+K L++ GKRLKL IWD
Sbjct: 5 NYDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYLSLMGKRLKLAIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRTLTSSYYRGAQGI+LVYDVT RE+F NL + W +EV Y+T++ VKMLV N
Sbjct: 65 TAGQERFRTLTSSYYRGAQGIVLVYDVTSRESFENL-EYWLEEVRKYATSRSSVKMLVAN 123
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
KVD + V+R EG A EH LF+E SAK + V++ F+QL LKI++ P LL+
Sbjct: 124 KVDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLLQ 179
>gi|57530682|ref|NP_001006355.1| ras-related protein Rab-18 [Gallus gallus]
gi|82233892|sp|Q5ZLG1.1|RAB18_CHICK RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|53129987|emb|CAG31432.1| hypothetical protein RCJMB04_6g4 [Gallus gallus]
Length = 206
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 130/175 (74%), Gaps = 3/175 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>gi|354473456|ref|XP_003498951.1| PREDICTED: ras-related protein Rab-18-like [Cricetulus griseus]
gi|344249075|gb|EGW05179.1| Ras-related protein Rab-18 [Cricetulus griseus]
Length = 206
Score = 200 bits (509), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 137/199 (68%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGV 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ ++ + GG CS
Sbjct: 186 KLSHREESHGGGACGGYCS 204
>gi|348565773|ref|XP_003468677.1| PREDICTED: ras-related protein Rab-18-like [Cavia porcellus]
Length = 206
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 136/199 (68%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGV 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + + GG CS
Sbjct: 186 KLSHMEESHGGGACGGYCS 204
>gi|405970601|gb|EKC35494.1| Ras-related protein Rab-18-B [Crassostrea gigas]
Length = 203
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+S VGKSSLL+ F + D + + TIGVDFK+K L V G R KL IWDTAGQ
Sbjct: 9 TLKILIIGESSVGKSSLLLRFTDDTFDPEQAATIGVDFKVKTLQVDGNRAKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG ILVYDVT R +F L DVW E++ +ST D +KMLVGNK+D+
Sbjct: 69 ERFRTLTPSYYRGAQGAILVYDVTNRASFQKL-DVWLNELETFSTKHDLIKMLVGNKIDQ 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R VS+E+G+ A++H LF+E SAKTRE V+ FE+L KI++ P L E
Sbjct: 128 EN-REVSKEDGLKFARKHHMLFIEASAKTREGVQCAFEELVEKIIQTPGLWE 178
>gi|290997916|ref|XP_002681527.1| rab family small GTPase [Naegleria gruberi]
gi|284095151|gb|EFC48783.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 102/198 (51%), Positives = 136/198 (68%), Gaps = 8/198 (4%)
Query: 19 LIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRT 77
L+GDS GKSS++ F + +SPTIGVDFK+K + V K++KLTI+DTAGQERFRT
Sbjct: 1 LVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTIFDTAGQERFRT 60
Query: 78 LTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERV 137
LTSSYYR A GIILVYDVTR ETF N+ + W KE DLYST ++CVK+L+GNK+D ER
Sbjct: 61 LTSSYYRNAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLIGNKIDLKEERK 119
Query: 138 VSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR----- 192
VS ++ AK + +++E SAKT+ENV++ FE++ +I+ +LLE V +
Sbjct: 120 VSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLLESTEPVRNKPTDNV 179
Query: 193 NILKQKPENQSPPIGGCC 210
NI +P N+S GCC
Sbjct: 180 NISTSEP-NESEGGSGCC 196
>gi|281207535|gb|EFA81718.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 202
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 103/198 (52%), Positives = 138/198 (69%), Gaps = 4/198 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
++K+LLIGDS VGK+S++ F+ + D DL TIGV+FK+K + V GK + L IWDTAGQ
Sbjct: 6 NYKVLLIGDSDVGKTSIVKRFLDDTFDEDLLCTIGVEFKMKAVEVDGKSVTLCIWDTAGQ 65
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
E+FR L SSYYRGA GIIL YDVT+RETF NL W E++ +S + VK+LVGNK+D+
Sbjct: 66 EKFRALISSYYRGAHGIILTYDVTKRETFKNLQ-YWLNEIETFSNRANVVKLLVGNKIDK 124
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V+REEG+ AK F+ECSAKT+ ++Q FE+LA KI+E PSL E+ N K+
Sbjct: 125 EN-REVTREEGLEFAKSKAMFFIECSAKTKIGIQQAFEELAHKIIETPSLSEDNEN-KKK 182
Query: 193 NILKQKPENQSPPIGGCC 210
I ++S GG C
Sbjct: 183 KIKATVSADESNQQGGYC 200
>gi|149634680|ref|XP_001506607.1| PREDICTED: ras-related protein Rab-18-like [Ornithorhynchus
anatinus]
Length = 206
Score = 200 bits (508), Expect = 3e-49, Method: Compositional matrix adjust.
Identities = 101/172 (58%), Positives = 129/172 (75%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|60223069|ref|NP_001012486.1| ras-related protein Rab-18 [Rattus norvegicus]
gi|81909560|sp|Q5EB77.1|RAB18_RAT RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|59808259|gb|AAH89957.1| RAB18, member RAS oncogene family [Rattus norvegicus]
Length = 206
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 137/197 (69%), Gaps = 6/197 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E + +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---QN 182
Query: 193 NILKQKPENQSPPIGGC 209
+K P +S G C
Sbjct: 183 KGVKLSPREESHGGGAC 199
>gi|30841008|ref|NP_851415.1| ras-related protein Rab-18 [Mus musculus]
gi|1710017|sp|P35293.2|RAB18_MOUSE RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|388325|gb|AAC37632.1| Rab18 [Mus musculus]
gi|515041|emb|CAA56583.1| rab18 [Mus musculus]
gi|26337433|dbj|BAC32402.1| unnamed protein product [Mus musculus]
gi|33604086|gb|AAH56351.1| RAB18, member RAS oncogene family [Mus musculus]
gi|74138639|dbj|BAE27140.1| unnamed protein product [Mus musculus]
gi|74150708|dbj|BAE25489.1| unnamed protein product [Mus musculus]
gi|74183892|dbj|BAE24512.1| unnamed protein product [Mus musculus]
gi|74191971|dbj|BAE32926.1| unnamed protein product [Mus musculus]
gi|74222309|dbj|BAE26955.1| unnamed protein product [Mus musculus]
gi|112292993|dbj|BAF02874.1| Rab18 [Mus musculus]
gi|148691081|gb|EDL23028.1| RAB18, member RAS oncogene family, isoform CRA_a [Mus musculus]
Length = 206
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 5/200 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E N K
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWES-ENQNKG 184
Query: 193 NILKQKPENQ-SPPIGGCCS 211
L + E++ GG CS
Sbjct: 185 VKLSHREESRGGGACGGYCS 204
>gi|225719394|gb|ACO15543.1| Ras-related protein Rab-18 [Caligus clemensi]
Length = 212
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 100/175 (57%), Positives = 128/175 (73%), Gaps = 2/175 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
S K+L+IG+S VGKSSL + F + D + S TIGVDFK+K +TV G R+KL IWDTAGQ
Sbjct: 11 SLKLLIIGESCVGKSSLQLRFTEDAFDPEHSATIGVDFKVKTITVQGNRVKLAIWDTAGQ 70
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRG QG ILVYDVT R++F+N+ + W E+D Y+T D VKMLVGNK D
Sbjct: 71 ERFRTLTPSYYRGGQGAILVYDVTNRDSFSNVEN-WLNELDTYATIHDIVKMLVGNKCDL 129
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
+ +RV+S+EEG A++H +F+E SAKTRE V+ FE+L I++ P L E S
Sbjct: 130 EEKRVISKEEGQKCARKHRMMFIEASAKTREGVQLAFEELVENIIQTPELWEASS 184
>gi|321457240|gb|EFX68330.1| hypothetical protein DAPPUDRAFT_301483 [Daphnia pulex]
Length = 207
Score = 200 bits (508), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 103/200 (51%), Positives = 138/200 (69%), Gaps = 4/200 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+ G+SGVGKSSLL+ F + D + + TIGVDFK+KL+ + G +KL IWDTAGQ
Sbjct: 8 TLKILITGESGVGKSSLLLRFTDDTFDNEQAATIGVDFKVKLINIDGNNVKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYR AQG ILVYDV R++F+ L D W E++ Y+TN + VKML+GNK+D+
Sbjct: 68 ERFRTLTPSYYRNAQGAILVYDVCSRQSFSRL-DAWFDELETYATNTNIVKMLIGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ R VSREEG+ AK+H LF+E SAKT++ V+ FE+L KI++ P L E ++ +
Sbjct: 127 E-RREVSREEGLKFAKKHSMLFIEASAKTKDGVQMAFEELVQKIIQTPGLWEVDASSQRG 185
Query: 193 NILKQKPENQSP-PIGGCCS 211
L + E P G CS
Sbjct: 186 MSLSDRTEGGQPWSCSGYCS 205
>gi|402587142|gb|EJW81078.1| member Ras oncogene family RAB18A [Wuchereria bancrofti]
Length = 200
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSL++ F+ + D +++ TIGVDF++ + V R+KL IWDTAGQ
Sbjct: 10 TLKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTTMMVDQNRVKLAIWDTAGQ 69
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYDV+ R+TF LS W EVD YST D VKML+GNK+D
Sbjct: 70 ERFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI 128
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
S R V+REEG+ AK+H LF+E SAKTRE V+ FE+L K+++ P L +
Sbjct: 129 -SNREVTREEGLQFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGLWD 179
>gi|224044745|ref|XP_002187766.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Taeniopygia
guttata]
Length = 207
Score = 199 bits (507), Expect = 4e-49, Method: Compositional matrix adjust.
Identities = 101/175 (57%), Positives = 130/175 (74%), Gaps = 3/175 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V+MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVQMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>gi|294931937|ref|XP_002780061.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
gi|239889905|gb|EER11856.1| GTP-binding protein yptV3, putative [Perkinsus marinus ATCC 50983]
Length = 193
Score = 199 bits (507), Expect = 5e-49, Method: Compositional matrix adjust.
Identities = 104/176 (59%), Positives = 128/176 (72%), Gaps = 2/176 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWD 68
+YD FK+L+IGDSGVGKS LL+ F +D TIGVDFK+K ++ GKRLKL IWD
Sbjct: 5 NYDHLFKLLIIGDSGVGKSCLLLRFCDDEFNDKQLATIGVDFKVKYISSMGKRLKLAIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRTLTSSYYRGAQGI+LVYDV RE+F NL + W +EV Y+T++ VKMLV N
Sbjct: 65 TAGQERFRTLTSSYYRGAQGIVLVYDVNSRESFENL-EYWLEEVRKYATSRSSVKMLVAN 123
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
KVD + V+R EG A EH LF+E SAK + V++ F+QL LKI++ P LLE
Sbjct: 124 KVDEVNGGDVTRREGEKFAIEHDMLFIESSAKLKVGVKEIFQQLVLKILDTPDLLE 179
>gi|260794026|ref|XP_002592011.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
gi|229277224|gb|EEN48022.1| hypothetical protein BRAFLDRAFT_122387 [Branchiostoma floridae]
Length = 213
Score = 199 bits (506), Expect = 6e-49, Method: Compositional matrix adjust.
Identities = 102/183 (55%), Positives = 131/183 (71%), Gaps = 9/183 (4%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +++ TIGVDFK+K LTV G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPEIAATIGVDFKVKTLTVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDV+ R +F L + W E++ +ST QD VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVSSRNSFNRL-EQWLSELETFSTKQDIVKMLVGNKIDK 126
Query: 133 DS-------ERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
S ++ V R EG+ A++H LF+E SAKTRE V+ FE+L KI++ P L E
Sbjct: 127 ASTLSSVQDKKEVDRNEGLKFARKHQMLFIEASAKTREGVQCAFEELVEKIIQTPGLWES 186
Query: 186 GSN 188
S
Sbjct: 187 DSQ 189
>gi|395827177|ref|XP_003786782.1| PREDICTED: ras-related protein Rab-18 [Otolemur garnettii]
Length = 206
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|355714854|gb|AES05139.1| RAB18, member RAS oncoprotein family [Mustela putorius furo]
Length = 205
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|301788416|ref|XP_002929624.1| PREDICTED: ras-related protein Rab-18-like [Ailuropoda melanoleuca]
Length = 206
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|335775453|gb|AEH58577.1| Ras-related protein Rab-18-like protein [Equus caballus]
Length = 206
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|10880989|ref|NP_067075.1| ras-related protein Rab-18 isoform 1 [Homo sapiens]
gi|197102556|ref|NP_001127616.1| ras-related protein Rab-18 [Pongo abelii]
gi|388452921|ref|NP_001253719.1| RAB18, member RAS oncogene family [Macaca mulatta]
gi|332240536|ref|XP_003269443.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Nomascus
leucogenys]
gi|332833815|ref|XP_003312545.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan troglodytes]
gi|397501611|ref|XP_003821474.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Pan paniscus]
gi|397501613|ref|XP_003821475.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan paniscus]
gi|402879861|ref|XP_003903543.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Papio anubis]
gi|403295005|ref|XP_003938447.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Saimiri
boliviensis boliviensis]
gi|410043688|ref|XP_003951660.1| PREDICTED: ras-related protein Rab-18 [Pan troglodytes]
gi|426364298|ref|XP_004049255.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Gorilla gorilla
gorilla]
gi|12230528|sp|Q9NP72.1|RAB18_HUMAN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|75070476|sp|Q5R5H5.1|RAB18_PONAB RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|7381201|gb|AAF61433.1|AF137372_1 ras-related protein RAB18 [Homo sapiens]
gi|12239330|gb|AAG49435.1|AF136974_1 ras-related protein 18 [Homo sapiens]
gi|20379076|gb|AAM21098.1|AF498950_1 small GTP binding protein RAB18 [Homo sapiens]
gi|33150584|gb|AAP97170.1|AF087860_1 rab18 [Homo sapiens]
gi|7531023|emb|CAB86486.1| ras-related small GTPase RAB18 [Homo sapiens]
gi|12052987|emb|CAB66668.1| hypothetical protein [Homo sapiens]
gi|15929113|gb|AAH15014.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|20809384|gb|AAH29350.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|32880023|gb|AAP88842.1| RAB18, member RAS oncogene family [Homo sapiens]
gi|49065336|emb|CAG38486.1| RAB18 [Homo sapiens]
gi|55732582|emb|CAH92991.1| hypothetical protein [Pongo abelii]
gi|61360907|gb|AAX41949.1| RAB18 member RAS oncogene family [synthetic construct]
gi|61360911|gb|AAX41950.1| RAB18 member RAS oncogene family [synthetic construct]
gi|90076230|dbj|BAE87795.1| unnamed protein product [Macaca fascicularis]
gi|90086345|dbj|BAE91725.1| unnamed protein product [Macaca fascicularis]
gi|117645108|emb|CAL38020.1| hypothetical protein [synthetic construct]
gi|119606460|gb|EAW86054.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119606461|gb|EAW86055.1| RAB18, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|193786050|dbj|BAG50939.1| unnamed protein product [Homo sapiens]
gi|208967232|dbj|BAG73630.1| RAB18, member RAS oncogene family [synthetic construct]
gi|380810740|gb|AFE77245.1| ras-related protein Rab-18 [Macaca mulatta]
gi|383411947|gb|AFH29187.1| ras-related protein Rab-18 [Macaca mulatta]
gi|384945898|gb|AFI36554.1| ras-related protein Rab-18 [Macaca mulatta]
gi|410209604|gb|JAA02021.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410260764|gb|JAA18348.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410305300|gb|JAA31250.1| RAB18, member RAS oncogene family [Pan troglodytes]
gi|410332701|gb|JAA35297.1| RAB18, member RAS oncogene family [Pan troglodytes]
Length = 206
Score = 198 bits (504), Expect = 9e-49, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|291401957|ref|XP_002717338.1| PREDICTED: RAB18, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|115495023|ref|NP_001068967.1| ras-related protein Rab-18 [Bos taurus]
gi|335296519|ref|XP_003357800.1| PREDICTED: ras-related protein Rab-18-like [Sus scrofa]
gi|426240891|ref|XP_004014327.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Ovis aries]
gi|122142144|sp|Q0IIG8.1|RAB18_BOVIN RecName: Full=Ras-related protein Rab-18; Flags: Precursor
gi|113911817|gb|AAI22651.1| RAB18, member RAS oncogene family [Bos taurus]
gi|296481383|tpg|DAA23498.1| TPA: ras-related protein Rab-18 [Bos taurus]
gi|385281370|gb|AFI57837.1| ras-related protein Rab-18 [Capra hircus]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|410963376|ref|XP_003988241.1| PREDICTED: ras-related protein Rab-18 isoform 1 [Felis catus]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|344277582|ref|XP_003410579.1| PREDICTED: ras-related protein Rab-18-like [Loxodonta africana]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFLKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|417397093|gb|JAA45580.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRSEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|149028369|gb|EDL83766.1| rCG40811, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 104/199 (52%), Positives = 137/199 (68%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGV 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ ++ + GG CS
Sbjct: 186 KLSPREECHGGGACGGYCS 204
>gi|328861035|gb|EGG10139.1| hypothetical protein MELLADRAFT_71064 [Melampsora larici-populina
98AG31]
Length = 228
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 109/204 (53%), Positives = 140/204 (68%), Gaps = 11/204 (5%)
Query: 6 GQSNSYDLS------FKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLT 56
G SNS D S K+LLIG S VGKSSLL+ F S ++ S TIGVDFK+KL++
Sbjct: 8 GPSNSNDSSTDPPQTLKLLLIGSSSVGKSSLLLRFTDEVFLSAEEASATIGVDFKVKLMS 67
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GKR KL+IWDTAGQERFRTLTSSYYRGAQG++LVYDVT RE+F +L W E+D ++
Sbjct: 68 RRGKRYKLSIWDTAGQERFRTLTSSYYRGAQGVVLVYDVTSRESFESLPS-WFSELDTFT 126
Query: 117 -TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALK 175
+ +D V+++VGNK D+D R VS EEG A A ++ +LF+E SAKT VE+ FE + K
Sbjct: 127 HSPRDVVRIVVGNKTDKDYSREVSIEEGRAFAADNNALFVETSAKTMRGVEEVFEAVVDK 186
Query: 176 IMEVPSLLEEGSNVVKRNILKQKP 199
I++ PSL +G N+ N L P
Sbjct: 187 IIDTPSLHNKGLNLRSNNRLATLP 210
>gi|62897867|dbj|BAD96873.1| RAB18, member RAS oncogene family variant [Homo sapiens]
Length = 206
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL +WDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLALWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|296206366|ref|XP_002750219.1| PREDICTED: uncharacterized protein LOC100402013 isoform 1
[Callithrix jacchus]
Length = 206
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K L+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|149016250|gb|EDL75496.1| rCG62892 [Rattus norvegicus]
Length = 206
Score = 197 bits (500), Expect = 3e-48, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG SGVGKSSLL+ F ++ D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGKSGVGKSSLLLRFTDNTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L + W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKLYN-WLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>gi|83753568|pdb|1X3S|A Chain A, Crystal Structure Of Human Rab18 In Complex With Gppnhp
Length = 195
Score = 196 bits (499), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 99/172 (57%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 15 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 74
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V LVGNK+D+
Sbjct: 75 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNXLVGNKIDK 133
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 134 EN-REVDRNEGLKFARKHSXLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 184
>gi|312084876|ref|XP_003144454.1| rab family protein 18 [Loa loa]
gi|307760381|gb|EFO19615.1| Ras-like protein Rab-18 [Loa loa]
Length = 200
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 127/172 (73%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL++G+SGVGKSSL++ F+ + D +++ TIG+DF++ + V R+KL IWDTAGQ
Sbjct: 10 TLKILIVGESGVGKSSLMLRFVDDTFDPEIAATIGIDFRVTSMMVDQNRVKLAIWDTAGQ 69
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYDV+ R+TF L W EVD YST D VKMLVGNK+D
Sbjct: 70 ERFRTLTPSYYRGAQGVICVYDVSNRQTFEKLGH-WMNEVDTYSTKMDAVKMLVGNKIDM 128
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
S R V+REEG+ AK++ LF+E SAKTRE V+ FE+L KI++ P L +
Sbjct: 129 -SNREVTREEGLEFAKKYRMLFIEASAKTREGVQCAFEELIEKILQTPGLWD 179
>gi|308477314|ref|XP_003100871.1| CRE-RAB-18 protein [Caenorhabditis remanei]
gi|308264445|gb|EFP08398.1| CRE-RAB-18 protein [Caenorhabditis remanei]
Length = 202
Score = 196 bits (498), Expect = 5e-48, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 132/197 (67%), Gaps = 6/197 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ + + G R+KL IWDTAGQ
Sbjct: 11 TLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVKLAIWDTAGQ 70
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYDVT R +F L+ W EVD Y TN + +KM+V NK+D
Sbjct: 71 ERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNDNIIKMMVANKIDM 129
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
RVVSREEG+ AK H +LF+E SAKTRE V+ FE+L KI++ P L + +
Sbjct: 130 -PNRVVSREEGLKFAKRHRTLFIEASAKTREGVQCTFEELIEKIIQTPDLWDNDRPTFR- 187
Query: 193 NILKQKPENQSPPIGGC 209
L Q + + GC
Sbjct: 188 --LGQPTDTSGGALCGC 202
>gi|268575806|ref|XP_002642883.1| C. briggsae CBR-RAB-18 protein [Caenorhabditis briggsae]
gi|74765201|sp|P90726.1|RAB18_CAEBR RecName: Full=Ras-related protein Rab-18
gi|1710360|gb|AAB38279.1| membrane associated GTP binding protein RAB18 [Caenorhabditis
briggsae]
Length = 202
Score = 195 bits (496), Expect = 8e-48, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 136/206 (66%), Gaps = 6/206 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLK 63
S S+S + KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ +T+ G R+K
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT SYYRGAQG+I VYDVT R +F L W EVD Y TN + +K
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
M+V NK+D R V+REEG+ AK H +LF+E SAKT+E V+ FE+L KI++ P L
Sbjct: 121 MMVANKIDM-PNRTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGC 209
+ + L Q + S + GC
Sbjct: 180 DNDRPTFR---LGQPTDTSSGNLCGC 202
>gi|341891892|gb|EGT47827.1| hypothetical protein CAEBREN_03430 [Caenorhabditis brenneri]
Length = 202
Score = 195 bits (496), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 137/206 (66%), Gaps = 6/206 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLK 63
S S+S + KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ + + G R+K
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMVIDGNRVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT SYYRGAQG+I VYDVT R +F L+ W EVD Y TN++ +K
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMTEVDTYCTNENIIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
M+V NK+D RVVSREEG+ AK H +LF+E SAKT+E V+ FE+L KI++ P L
Sbjct: 121 MMVANKIDM-PNRVVSREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGC 209
+ + L Q + + GC
Sbjct: 180 DNDRPTFR---LGQSTDASGGSLCGC 202
>gi|25151658|ref|NP_741092.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
gi|75017365|sp|Q8MXS1.1|RAB18_CAEEL RecName: Full=Ras-related protein Rab-18
gi|351018339|emb|CCD62283.1| Protein RAB-18, isoform b [Caenorhabditis elegans]
Length = 203
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLK 63
S S+S + KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ + + G R+K
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT SYYRGAQG+I VYDVT R +F L+ W +EVD Y TN + +K
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
M+V NK+D RVV+REEG+ AK H +LF+E SAKT+E V+ FE+L KI++ P L
Sbjct: 121 MMVANKIDM-PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
Query: 184 E 184
+
Sbjct: 180 D 180
>gi|118102871|ref|XP_423284.2| PREDICTED: ras-related protein Rab-18-B-like [Gallus gallus]
Length = 204
Score = 195 bits (495), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 96/176 (54%), Positives = 129/176 (73%), Gaps = 3/176 (1%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAG 71
++ K++LIGDS VGKSSLL+ F S + L PTI VDFK+K + V G ++L IWDTAG
Sbjct: 6 ITVKLILIGDSAVGKSSLLLRFAEGSFEPSLKPTICVDFKVKKMVVDGHTVQLAIWDTAG 65
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRTL SYYRG QGI+LVYDVTR++TFT L D W E+++Y+T + VKMLVGNK D
Sbjct: 66 QERFRTLNPSYYRGTQGIVLVYDVTRKDTFTGL-DSWLNELEIYNTKSNTVKMLVGNKTD 124
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
+ +R V R EG+ AK+ LF+E SAKT + V+ FE+L +KI++ P+LL++ +
Sbjct: 125 K-PDREVERREGLQFAKKRSLLFIETSAKTEDGVQHAFEELVIKILQTPNLLDKST 179
>gi|427787123|gb|JAA59013.1| Putative rab18a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 201
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+S VGKSSLL+ F D +L+ TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGS 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG ILVYDV TF L D W E++ Y T + VKMLVGNK+D+
Sbjct: 69 ERFRTLTPSYYRGAQGAILVYDVCNYSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDK 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
RVV++E+G+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E
Sbjct: 128 HENRVVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWE 179
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 194 bits (493), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 136/204 (66%), Gaps = 12/204 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYD FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 SYDYLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N+S W + ++ ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNISK-WLRNIEEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM--EVPSLLEEG 186
K D D R+VSRE G +A+EHG FLE SAKT N+EQ F+ LA I+ E+ EE
Sbjct: 123 KCDMDDRRIVSRERGEQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEEP 182
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
SN + +Q GGCC
Sbjct: 183 SNNI-------HVHDQKDKKGGCC 199
>gi|241068895|ref|XP_002408522.1| RAB-18, putative [Ixodes scapularis]
gi|215492508|gb|EEC02149.1| RAB-18, putative [Ixodes scapularis]
Length = 201
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/172 (56%), Positives = 123/172 (71%), Gaps = 2/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+S VGKSSLL+ F D L+ TIGVDFK+K +TV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRFTDDVFDPSLAATIGVDFKVKTVTVDGNKAKLAIWDTAGS 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG ILVYDV+ TF L D W E++ Y T + VKMLVGNK+DR
Sbjct: 69 ERFRTLTPSYYRGAQGAILVYDVSNHNTFLKL-DHWLAELETYCTRSNVVKMLVGNKIDR 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
RVVS+E+G+ A++H LF+E SAKT++ V+ FE+L KI++ P L E
Sbjct: 128 HESRVVSKEQGMNYARKHSMLFIEASAKTKDGVQCAFEELVEKIIQTPGLWE 179
>gi|391341575|ref|XP_003745104.1| PREDICTED: ras-related protein Rab-18-like [Metaseiulus
occidentalis]
Length = 203
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 97/190 (51%), Positives = 137/190 (72%), Gaps = 5/190 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG++ VGKS LL+ F+ + D L+ TIG D K K++TV ++KL++WDTAG
Sbjct: 7 TLKVLIIGEADVGKSCLLLRFVEDTFDTQLTSTIGFDHKSKVITVFDNKVKLSLWDTAGS 66
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT+SYYRGAQG +LVYDVT RE+F L D W E++ Y+T+++ VKMLVGNKVD+
Sbjct: 67 ERFRTLTASYYRGAQGAVLVYDVTCRESFEKL-DSWLIELETYATHKNIVKMLVGNKVDK 125
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+R V+++EGI+ A+ H LF+E SA+T ENV CFE+L KI+ P L + ++ +
Sbjct: 126 HEQRQVTKQEGISYARRHQMLFVEASARTSENVTGCFEELVAKILHTPGLWTKKND--RE 183
Query: 193 NI-LKQKPEN 201
NI L P+N
Sbjct: 184 NITLTDAPDN 193
>gi|443683130|gb|ELT87498.1| hypothetical protein CAPTEDRAFT_21334 [Capitella teleta]
gi|443728770|gb|ELU14963.1| hypothetical protein CAPTEDRAFT_21450 [Capitella teleta]
Length = 204
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 135/199 (67%), Gaps = 6/199 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ K+L+IG++GVGKSSLL+ F + D + S TIGVDFK+K + V G R KL IWDTAGQ
Sbjct: 9 TLKLLIIGETGVGKSSLLLRFTDDTFDPEQSATIGVDFKVKTIQVDGNRAKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG ILVYDV + +F L D W E++ +ST D VKMLVGNK+D+
Sbjct: 69 ERFRTLTPSYYRGAQGCILVYDVCSQASFAKL-DNWLNELETFSTKHDIVKMLVGNKIDK 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ R VSREEG+ A+ + LF+E SAKT+E V+ FE+L KI++ P L E +
Sbjct: 128 EP-REVSREEGLKFARRYHMLFIEASAKTKEGVQCAFEELVEKILQTPGLWETDQRGLS- 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + ++ + GG CS
Sbjct: 186 --IGRNDQSAAAGCGGYCS 202
>gi|255634935|gb|ACU17826.1| unknown [Glycine max]
Length = 121
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/111 (85%), Positives = 104/111 (93%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
M SSSGQS+ YDLSFKILLIGDS VGKSSLLVSFIS+S +D++PTIGVDFKIK+LTV GK
Sbjct: 1 MNSSSGQSSGYDLSFKILLIGDSAVGKSSLLVSFISNSAEDIAPTIGVDFKIKMLTVGGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKE 111
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRR+TFTNLS+V K+
Sbjct: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRDTFTNLSEVCLKK 111
>gi|325303040|tpg|DAA34577.1| TPA_exp: GTPase Rab18 [Amblyomma variegatum]
Length = 201
Score = 191 bits (486), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 98/176 (55%), Positives = 123/176 (69%), Gaps = 2/176 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+S VGKSSLL+ F D +L+ TIGVDFK+K LTV G + KL IWDTAG
Sbjct: 9 TLKILIIGESNVGKSSLLLRFTDDVFDPNLAATIGVDFKVKTLTVDGNKAKLAIWDTAGS 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG ILVYDV TF L D W E++ Y T + VKMLVGNK+D+
Sbjct: 69 ERFRTLTPSYYRGAQGAILVYDVCNHSTFQKL-DHWLAELETYCTRNNVVKMLVGNKIDK 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
R V++E+G+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E N
Sbjct: 128 LENREVTKEQGMNYARKHSMLFIEASAKTRDGVQCAFEELVEKIIQTPGLWENLRN 183
>gi|351712339|gb|EHB15258.1| Ras-related protein Rab-18 [Heterocephalus glaber]
Length = 205
Score = 191 bits (485), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 135/199 (67%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+ +AKT + V+ FE+L KI++ P L E +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIG-NAKTCDGVQCAFEELVEKIIQTPGLWESENQNKGV 184
Query: 193 NILKQKPENQSPPIGGCCS 211
+ + + GG CS
Sbjct: 185 RLSHMEDSHGRGACGGYCS 203
>gi|464565|sp|Q05976.1|RB18A_LYMST RecName: Full=Ras-related protein Rab-18A
gi|288936|emb|CAA51235.1| RAB18a [Lymnaea stagnalis]
Length = 202
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 128/183 (69%), Gaps = 5/183 (2%)
Query: 21 GDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLT 79
G+SGVGKSSLL+ F + D + + TIGVDFK+K LTV G + KL IWDTAGQERFRTLT
Sbjct: 16 GESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLT 75
Query: 80 SSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVS 139
SYYRGAQG+ILVYDV+ +++F L D W E++ +ST D VKMLVGNK+DR + V+
Sbjct: 76 PSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLVGNKIDRANHE-VT 133
Query: 140 REEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKP 199
++EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S + + P
Sbjct: 134 KDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSSKNL--TLSNHGP 191
Query: 200 ENQ 202
E Q
Sbjct: 192 EGQ 194
>gi|240849344|ref|NP_001155696.1| RAB18B, member RAS oncogene family-like [Acyrthosiphon pisum]
gi|328718584|ref|XP_003246519.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|328718586|ref|XP_003246520.1| PREDICTED: ras-related protein Rab-18-B-like [Acyrthosiphon pisum]
gi|239789319|dbj|BAH71290.1| ACYPI007125 [Acyrthosiphon pisum]
Length = 200
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 100/183 (54%), Positives = 130/183 (71%), Gaps = 6/183 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KILLIG SGVGKS LL F + + D + TIGVDFK++ +TV +KL +WDTAGQ
Sbjct: 8 TLKILLIGQSGVGKSCLLCRFTDDTFNVDNAVTIGVDFKMRKITVDNNNIKLALWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT +YYR QG +LVYDV+ R++FT L + W E++ YST + +KM+VGNK+
Sbjct: 68 ERFRTLTPNYYRDGQGAVLVYDVSNRDSFTCL-ETWINELNRYSTKTNIIKMVVGNKI-- 124
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE--EGSNVV 190
D ER V+REEGIA A+ H +LF+E SAKT+E V FE+L KI+ PSL E E +NVV
Sbjct: 125 DMERQVTREEGIAFARRHQTLFIETSAKTKEGVYMAFEELVRKIINTPSLWEKLEDANVV 184
Query: 191 KRN 193
+ N
Sbjct: 185 RCN 187
>gi|66804573|ref|XP_636019.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74896885|sp|Q54GY8.1|RAB18_DICDI RecName: Full=Ras-related protein Rab-18
gi|60464366|gb|EAL62514.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 202
Score = 190 bits (482), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D +K+LLIGDS VGK+S++ F + D DL TIGV+FK+K + V GK++ L IWDTA
Sbjct: 4 DKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTA 63
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQE+FR L SSYYRGA GIIL YDVT+RE+F NL + W EV+ ++ + VK+LVGNK+
Sbjct: 64 GQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNKI 122
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D+++ R V+REEG AK+ LF+ECSAK++ ++Q FE+LA KI+E+P S
Sbjct: 123 DKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNT-SSSQPK 180
Query: 191 KRNILKQKPENQSPPIGGCCS 211
+RN K E++ G CS
Sbjct: 181 QRNTGSVKVEDEPDHNQGVCS 201
>gi|194762816|ref|XP_001963530.1| GF20241 [Drosophila ananassae]
gi|190629189|gb|EDV44606.1| GF20241 [Drosophila ananassae]
Length = 204
Score = 189 bits (481), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVV++E G A+A+EHG F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIEEAFCELAQAILDKTSGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R I+ ++ +++P CC+
Sbjct: 183 -QERVIIDRRNNDKAPGYNKCCA 204
>gi|326430486|gb|EGD76056.1| GTP-binding protein yptV3 [Salpingoeca sp. ATCC 50818]
Length = 199
Score = 189 bits (481), Expect = 5e-46, Method: Compositional matrix adjust.
Identities = 96/178 (53%), Positives = 130/178 (73%), Gaps = 5/178 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D KIL+IGDS GKS LL+ F + D+ + PTIGVDFK K+LT+ G+++KLT+WDTA
Sbjct: 5 DAELKILIIGDSNCGKSCLLMRFTDDTFDEHMGPTIGVDFKNKMLTLNGQQVKLTVWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQ+RF+TLT+SYYRGA G+ILVYDVTRR TF ++ W E ++Y + + VKMLV NK+
Sbjct: 65 GQDRFKTLTASYYRGAHGVILVYDVTRRATFEHIIP-WLNEANVYC-DDNVVKMLVANKI 122
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D R VS +EG ALA+E LF+ECSAKT+ V+Q FE+LA ++++ P L + S+
Sbjct: 123 DE--PRQVSTDEGRALAREKNMLFIECSAKTKVGVQQAFEELAQQVLDTPELYQSPSS 178
>gi|91082425|ref|XP_970378.1| PREDICTED: similar to RAB18, member RAS oncogene family [Tribolium
castaneum]
gi|270007517|gb|EFA03965.1| hypothetical protein TcasGA2_TC014110 [Tribolium castaneum]
Length = 204
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 97/172 (56%), Positives = 124/172 (72%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSS+LV F + D D + TIGVDFK K LTV +KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSILVRFTEDNFDPDQTLTIGVDFKTKKLTVDDNTVKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYR AQG ILVYDVT TF L + W E++ YST + VKM+VGNK+D+
Sbjct: 68 ERFRTLTPSYYRDAQGAILVYDVTNYSTFAKL-ETWLNELETYSTKANIVKMIVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V+REE + A+ H +L++E SAKTR+ V+ FE+L KI++ P L E
Sbjct: 127 EN-REVNREEAMKFARRHQTLYIEASAKTRDGVQCAFEELVHKIIQTPGLWE 177
>gi|328870650|gb|EGG19023.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 101/197 (51%), Positives = 131/197 (66%), Gaps = 6/197 (3%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
+KILLIGDS VGK+S++ F D DL TIGV++K+K L V K + IWDTAGQE
Sbjct: 8 YKILLIGDSDVGKTSIVKRFSDDIFDEDLLCTIGVEYKVKTLKVDDKEVTFNIWDTAGQE 67
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
+FR L SSYYRGA GIIL YDVT+RETF NL W E++ +ST + VK+LVGNK+D++
Sbjct: 68 KFRALISSYYRGAHGIILTYDVTKRETFKNLQ-YWLNEIETFSTRSNVVKLLVGNKIDKE 126
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRN 193
+ R V+REEG+ A+ LF+ECSAKT+ ++Q FE+LA KI+E P EE K
Sbjct: 127 N-REVTREEGLEFARSKAMLFIECSAKTKVGIQQAFEELAHKILETPD--EEPQKKKKST 183
Query: 194 ILKQKPENQSPPIGGCC 210
L Q P+ Q + C
Sbjct: 184 NLVQ-PDEQDQNMDSYC 199
>gi|319411948|emb|CBQ73991.1| probable Ras-related protein Rab-18 [Sporisorium reilianum SRZ2]
Length = 233
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 8 SNSYDL-SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLK 63
S+S D+ + KILLIG S VGKSSLL+ F S ++ + TIGVD++IK + V GKR K
Sbjct: 2 SSSADVPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L+IWDTAGQERFRTLTSSYYRGAQG+I+ YDVT+R+TF L W E++ ++T+ D VK
Sbjct: 62 LSIWDTAGQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSDDVVK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
++VGNKVD++ RVV+ +EG A A + G LF+ECSAK V F++L +I+ PSL
Sbjct: 121 IIVGNKVDKEFSRVVTTQEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLW 180
Query: 184 EE 185
++
Sbjct: 181 QK 182
>gi|388854821|emb|CCF51502.1| probable Ras-related protein Rab-18 [Ustilago hordei]
Length = 232
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 127/175 (72%), Gaps = 4/175 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ KILLIG S VGKSSLL+ F S ++ + TIGVD++IK + V GKR KL+IWDTA
Sbjct: 8 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 67
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQG+I+ YDVT+R+TF L W E++ ++T++D VK++VGNKV
Sbjct: 68 GQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKV 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
D++ RVV+ EEG A + G LF+ECSAK V F++L +I+ PSL ++
Sbjct: 127 DKEFSRVVTTEEGQGFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 181
>gi|126326099|ref|XP_001363346.1| PREDICTED: ras-related protein Rab-18-like [Monodelphis domestica]
Length = 208
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 102/199 (51%), Positives = 132/199 (66%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ + D ++S TIGVDFK+K ++ G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRITDDTFDPNISATIGVDFKVKTISFDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT +YYRGAQG+ILVYDVTRR+TF L D W E++ + D KMLVGNK+D+
Sbjct: 68 ERFRTLTPNYYRGAQGVILVYDVTRRDTFVKL-DNWLIELNTHCMGNDITKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ V R EG+ A++H LF+E SAKT + V FE+L KI + P + E N K
Sbjct: 127 ENHE-VDRNEGLKFARKHSMLFIEVSAKTCDGVRCAFEELVEKIFQTPGVWEI-KNQKKG 184
Query: 193 NILKQKPENQSPPIGGCCS 211
L Q E+ GGC S
Sbjct: 185 VRLSQNEESPGRVCGGCFS 203
>gi|443895663|dbj|GAC73008.1| GTPase Rab18 [Pseudozyma antarctica T-34]
Length = 233
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 95/175 (54%), Positives = 128/175 (73%), Gaps = 4/175 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ KILLIG S VGKSSLL+ F S ++ + TIGVD++IK + V GKR KL+IWDTA
Sbjct: 9 TLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFKLSIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQG+I+ YDVT+R+TF L W E++ ++T++D VK++VGNKV
Sbjct: 69 GQERFRTLTSSYYRGAQGVIIAYDVTQRDTFDALP-TWFNELETFTTSEDVVKIIVGNKV 127
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
D++ RVV+ +EG A A + G LF+ECSAK V F++L +I+ PSL ++
Sbjct: 128 DKEFSRVVTTDEGQAFADKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLWQK 182
>gi|17737369|ref|NP_523419.1| Rab10 [Drosophila melanogaster]
gi|194893373|ref|XP_001977864.1| GG19277 [Drosophila erecta]
gi|195345923|ref|XP_002039518.1| GM23016 [Drosophila sechellia]
gi|195482026|ref|XP_002101878.1| GE17866 [Drosophila yakuba]
gi|2317272|dbj|BAA21744.1| Rab10 [Drosophila melanogaster]
gi|7295615|gb|AAF50924.1| Rab10 [Drosophila melanogaster]
gi|16648398|gb|AAL25464.1| LD39986p [Drosophila melanogaster]
gi|190649513|gb|EDV46791.1| GG19277 [Drosophila erecta]
gi|194134744|gb|EDW56260.1| GM23016 [Drosophila sechellia]
gi|194189402|gb|EDX02986.1| GE17866 [Drosophila yakuba]
gi|220946172|gb|ACL85629.1| Rab10-PA [synthetic construct]
gi|220955946|gb|ACL90516.1| Rab10-PA [synthetic construct]
Length = 204
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVV++E G A+A+EHG F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R I+ ++ + ++P CC+
Sbjct: 183 -QERVIIDRRNQEKAPGYSKCCA 204
>gi|195448332|ref|XP_002071611.1| GK25049 [Drosophila willistoni]
gi|194167696|gb|EDW82597.1| GK25049 [Drosophila willistoni]
Length = 204
Score = 188 bits (477), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVVS+E G A+A+EHG F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMTDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ ++ +++P CC+
Sbjct: 183 -PERVVIDRRNNDKAPGYNKCCA 204
>gi|158287951|ref|XP_309827.4| AGAP010875-PA [Anopheles gambiae str. PEST]
gi|157019435|gb|EAA05523.4| AGAP010875-PA [Anopheles gambiae str. PEST]
Length = 203
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 122/172 (70%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+FKIL+IG+SGVGKSSL++ F + D D + TIGVDFK K+L + G ++KL IWDTAGQ
Sbjct: 9 TFKILIIGESGVGKSSLMLRFTENDFDSDQALTIGVDFKTKMLDLDGVKVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYR AQG ILVYDVT+ +TF L + W E+++Y T + KM+VGNK+D
Sbjct: 69 ERFRTLTPSYYRDAQGAILVYDVTKPDTFQKL-ESWLNELEIYGTRNNMAKMVVGNKIDH 127
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
R + REEG AK+H +F+E SAKT E V+ FE++ KIME L E
Sbjct: 128 -PNRAIGREEGFRFAKKHRMMFIETSAKTSEGVKDAFEEVVRKIMETDGLWE 178
>gi|289741231|gb|ADD19363.1| Rab protein 10 [Glossina morsitans morsitans]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVVS+E G A+A+EHG F+E SAK+ N+E+ F +LA I++ + E N
Sbjct: 123 KCDMADKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTAGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ ++ ++P CCS
Sbjct: 183 -PERVVVDRRNNEKAPAYKSCCS 204
>gi|198469194|ref|XP_002134246.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
gi|198146758|gb|EDY72873.1| GA26078 [Drosophila pseudoobscura pseudoobscura]
Length = 204
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 139/203 (68%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVV++E G A+A+EHG F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMTDKRVVNKERGEAIAREHGIRFMETSAKSNTNIERAFCELAEAILDKTSGKEAAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ ++ +++P CC+
Sbjct: 183 -PERVVIDRRNNDKAPGYSKCCA 204
>gi|328770926|gb|EGF80967.1| hypothetical protein BATDEDRAFT_11061 [Batrachochytrium
dendrobatidis JAM81]
Length = 227
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 98/177 (55%), Positives = 127/177 (71%), Gaps = 7/177 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+FK+LLIGDSG GKSSLL+ F D++S TIGVDFK+K++ + K+ KLTIWDTA
Sbjct: 25 TFKLLLIGDSGTGKSSLLLQFTDDLWLQPDEVSATIGVDFKVKVIDIDSKKYKLTIWDTA 84
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLY-STNQDCVKMLVGNK 129
GQERFRTLTSSYYRGAQG+ILVYDV+ R +F +L W E+D Y S+N VK++VGNK
Sbjct: 85 GQERFRTLTSSYYRGAQGVILVYDVSNRGSFDHLQ-TWFNELDTYTSSNNSVVKIIVGNK 143
Query: 130 VDRD--SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
D+D R V R+EG A AK+ G+LF+E SAKT V F ++ +I++ PSL +
Sbjct: 144 SDKDVSGGREVPRKEGEAFAKKMGTLFIETSAKTTMGVRDAFVEVVRRIIDTPSLWQ 200
>gi|195398659|ref|XP_002057938.1| GJ15815 [Drosophila virilis]
gi|194150362|gb|EDW66046.1| GJ15815 [Drosophila virilis]
Length = 204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 138/203 (67%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVVS+E G A+A+EHG F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMGDKRVVSKERGEAIAREHGIRFMETSAKSNINIERAFCELAEAILDKTSGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ + +++P CC+
Sbjct: 183 -PERVVIDRANSDKAPGYNKCCA 204
>gi|332372776|gb|AEE61530.1| unknown [Dendroctonus ponderosae]
Length = 204
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/172 (54%), Positives = 122/172 (70%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D + + TIGVDFK K L V G +KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTEDNFDPEQTLTIGVDFKTKKLNVEGNTVKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYR AQG ILV+DV + TF L + W E++ YST + VKM++GNK+D
Sbjct: 68 ERFRTLTPSYYRDAQGAILVFDVGSQATFAKL-ETWLNELETYSTKNNIVKMIIGNKIDV 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
D R VSRE+ +A A+ H +L++E SAKT+ V+ FE+L KI++ P L E
Sbjct: 127 D-HREVSREQAMAFARRHQTLYIEASAKTKHGVQAAFEELVHKIIQTPGLWE 177
>gi|242020978|ref|XP_002430924.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
gi|212516142|gb|EEB18186.1| GTP-binding nuclear protein RAN1, putative [Pediculus humanus
corporis]
Length = 206
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 97/199 (48%), Positives = 135/199 (67%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVDDLSP-TIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ FI D P TIGVDFK K +TV G R+KL +WDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFIDDKFDPDQPLTIGVDFKTKEMTVDGNRVKLALWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTL SYYR A G ILVYDV+ TF + D W E+D+Y+T + +K++VGNK+D
Sbjct: 68 ERFRTLIPSYYRDAHGAILVYDVSNYITFRKIED-WLNELDVYATKPNLIKIIVGNKIDL 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
+ +R V++EEGI LAK H +LF+E S KT++ V+ ++L KI++ P L + S+ ++
Sbjct: 127 E-KREVTKEEGIKLAKRHATLFIESSVKTKDGVQTAMQELVQKIIQTPGLWDPISHNLRL 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ +PE + G C+
Sbjct: 186 DQNHYEPEYKYNCSGYRCN 204
>gi|148298847|ref|NP_001091822.1| small GTP-binding protein Rab10 [Bombyx mori]
gi|111608111|gb|ABH10799.1| small GTP-binding protein Rab10 [Bombyx mori]
Length = 203
Score = 186 bits (472), Expect = 6e-45, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 141/203 (69%), Gaps = 5/203 (2%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF ++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVVS+E G A+A+EHG F+E SAK N+++ F +LA I++ + E ++
Sbjct: 123 KCDMEEKRVVSKERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTAGREADAD 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
R ++++P +++PP CC+
Sbjct: 183 -HSRIAVERRP-SRAPPSRACCT 203
>gi|401885802|gb|EJT49887.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 2479]
Length = 222
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 107/212 (50%), Positives = 135/212 (63%), Gaps = 19/212 (8%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ K+LLIG+S VGKSSLL+ F S ++ + TIGVDFK+K + V G+R KL+IWDTA
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQG+ILVYDVT+R TF L W +E+D Y +D VK++VGNKV
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVTQRNTFDELIK-WFREIDTYCA-EDVVKIIVGNKV 129
Query: 131 DR-------------DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
D+ + R V+ EEG A A G+LF+ECSAKTR V F+ L +I+
Sbjct: 130 DKVTLVAIRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQVLVRRIL 189
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
E PSL G V R Q E+ + GC
Sbjct: 190 ETPSLWTRGPQPV-RTPNVQLQEDAPGYLSGC 220
>gi|66475702|ref|XP_627667.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|67619548|ref|XP_667653.1| small GTP binding protein rab1a [Cryptosporidium hominis TU502]
gi|32398899|emb|CAD98364.1| small GTP binding protein rab1a, probable [Cryptosporidium parvum]
gi|46229098|gb|EAK89947.1| RAS small GTpases RIC1/ypt1 [Cryptosporidium parvum Iowa II]
gi|54658806|gb|EAL37422.1| small GTP binding protein rab1a [Cryptosporidium hominis]
Length = 203
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 134/205 (65%), Gaps = 10/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ +++ K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D S+RVV+ +EG LA HG F+E SAK NVEQ F +A +I ++V S G
Sbjct: 123 CDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQVNSQNTRG 182
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
S + +P Q GGCCS
Sbjct: 183 SAQQGPKLAGAQPIRQ----GGCCS 203
>gi|170036368|ref|XP_001846036.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
gi|167879008|gb|EDS42391.1| GTP-binding protein yptV3 [Culex quinquefasciatus]
Length = 200
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 124/172 (72%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+FKIL+IG+SGVGKSSL++ F D D + TIGVDFK K++ + ++KL IWDTAGQ
Sbjct: 9 TFKILIIGESGVGKSSLMLRFTEDDFDKDQALTIGVDFKTKIVEIDNVKVKLAIWDTAGQ 68
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYR AQG ILVYDVT+++TF L + W E+++Y T + KM+VGNK+D
Sbjct: 69 ERFRTLTPSYYRDAQGAILVYDVTKKDTFQKL-ESWLNELEIYGTRNNMAKMIVGNKID- 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++R ++R++G AK+H ++F+E SA+T E V FE++ KIME L E
Sbjct: 127 STDRTITRDDGFRFAKKHRTMFIETSARTNEGVRDAFEEVVRKIMETDGLWE 178
>gi|221052060|ref|XP_002257606.1| Rab18 GTPase [Plasmodium knowlesi strain H]
gi|193807436|emb|CAQ37942.1| Rab18 GTPase, putative [Plasmodium knowlesi strain H]
Length = 201
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 102/200 (51%), Positives = 137/200 (68%), Gaps = 6/200 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + ++ + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELS- 181
Query: 188 NVVKRNI-LKQKPENQSPPI 206
VV +N+ L +K EN+S +
Sbjct: 182 -VVTKNLKLSKKEENRSNCV 200
>gi|209881799|ref|XP_002142337.1| Ras small GTPase RIC1/ypt1 protein [Cryptosporidium muris RN66]
gi|209557943|gb|EEA07988.1| Ras small GTPase RIC1/ypt1 protein, putative [Cryptosporidium muris
RN66]
Length = 203
Score = 185 bits (470), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 137/205 (66%), Gaps = 10/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ +T+ K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTITLENKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S+RVV+ +EG LA +G F+E SAK NVEQ F +A +I + L +N
Sbjct: 123 CDLVSKRVVTSDEGKELADSYGIKFIETSAKNAYNVEQAFHTMAGEIKKRVQL----NNQ 178
Query: 190 VKRNILKQKPE-NQSPPI--GGCCS 211
+ + +Q P+ + PI GGCC+
Sbjct: 179 NTKGVTQQGPKLAGAQPIRQGGCCA 203
>gi|196001837|ref|XP_002110786.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
gi|190586737|gb|EDV26790.1| hypothetical protein TRIADDRAFT_49948 [Trichoplax adhaerens]
Length = 205
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 132/199 (66%), Gaps = 3/199 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG++GVGKSSLL+ F D + S TIGVDFKIK + V G R+KL IWDTAGQ
Sbjct: 7 TLKILIIGEAGVGKSSLLLRFTDDQFDPEQSATIGVDFKIKTVNVEGNRVKLAIWDTAGQ 66
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYD ++R +F L + W E+ Y T +D +KMLVGNK+D+
Sbjct: 67 ERFRTLTPSYYRGAQGVILVYDTSKRTSFDKLEN-WLTELRTYCTKRDVIKMLVGNKIDK 125
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D +R V G A+ + LF ECSAKT ++V+ F++L KI++ P L + +
Sbjct: 126 D-QREVDTLTGTNFARRYQMLFTECSAKTCDHVQDAFDELVHKIIQTPGLWDTEKSNSGL 184
Query: 193 NILKQKPENQSPPIGGCCS 211
I ++ E ++ G CS
Sbjct: 185 KIGERDGEAKASSCYGGCS 203
>gi|71019037|ref|XP_759749.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
gi|46099272|gb|EAK84505.1| hypothetical protein UM03602.1 [Ustilago maydis 521]
Length = 233
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 97/182 (53%), Positives = 132/182 (72%), Gaps = 5/182 (2%)
Query: 8 SNSYDL-SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLK 63
S+S D+ + KILLIG S VGKSSLL+ F S ++ + TIGVD++IK + V GKR K
Sbjct: 2 SSSNDVPTLKILLIGASSVGKSSLLLRFTDDEFLSPEETTATIGVDYRIKGIEVGGKRFK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L+IWDTAGQERFRTLTSSYYRGAQG+I+ YDVT+R+TF L W E++ ++T+ D VK
Sbjct: 62 LSIWDTAGQERFRTLTSSYYRGAQGVIITYDVTQRDTFDALP-TWFNELETFTTSDDVVK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
++VGNKVD++ RVV+ +EG A++ G LF+ECSAK V F++L +I+ PSL
Sbjct: 121 VIVGNKVDKEFSRVVTTKEGQEFAEKMGCLFVECSAKKGVGVNGAFDELVNRIISTPSLW 180
Query: 184 EE 185
++
Sbjct: 181 QK 182
>gi|89258421|gb|ABD65434.1| Rab10 [Suberites domuncula]
Length = 208
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 96/211 (45%), Positives = 139/211 (65%), Gaps = 4/211 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAG 59
M + + +YDL FK+LLIGDSGVGK+ +L + + + TIG+DFKIK + + G
Sbjct: 1 MAAQAVPKKAYDLLFKLLLIGDSGVGKTCVLFRYADDTFNTTFISTIGIDFKIKTIELEG 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL IWDTAGQERF T+T+SYYRGA GIILVYD+T +++F N++ W + ++++++
Sbjct: 61 KRIKLQIWDTAGQERFHTITTSYYRGAMGIILVYDITNQKSFDNITK-WLQNIEMHAS-A 118
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D ++L+GNK D ++ RVV ++ G ALA G FLE SAKT N+E+ FEQLA +I+
Sbjct: 119 DVERILIGNKCDWEARRVVPKDRGNALAHNQGISFLETSAKTNYNIEEAFEQLAKQILRK 178
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+E V+ N K+ E+ S CC
Sbjct: 179 VPAKKEDETVLDLNRSKKSTED-SDKSSKCC 208
>gi|167521531|ref|XP_001745104.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163776718|gb|EDQ90337.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 125/170 (73%), Gaps = 4/170 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+FK+L+IGDS GKSSLL++F + D+ + PTIGVDFK K L + G ++ LT+WDTAGQ
Sbjct: 8 TFKVLIIGDSNCGKSSLLMAFTEGTFDESIGPTIGVDFKQKSLMLDGNKVNLTLWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT+SYYRGA +IL+YDV+R ETF ++ D+W EV++Y + VK+L+ NK+D
Sbjct: 68 ERFRTLTASYYRGAHAVILLYDVSRPETFEHI-DMWLNEVNVYCPEKKIVKLLIANKIDL 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
ER VS E G A++ +F+ECSAKT+ V+Q FE+LA K+++ P L
Sbjct: 127 --ERRVSTEVGRDFARDKQMMFIECSAKTKAGVQQAFEELAQKVLDTPEL 174
>gi|330806499|ref|XP_003291206.1| Rab GTPase [Dictyostelium purpureum]
gi|325078628|gb|EGC32269.1| Rab GTPase [Dictyostelium purpureum]
Length = 202
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 136/197 (69%), Gaps = 3/197 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+K+LLIGDS VGK+S++ F + D+ + TIGV+FK+K + V GK++ L IWDTAGQ
Sbjct: 6 QYKVLLIGDSDVGKTSIVKRFSDDTFDEEVLTTIGVEFKMKEVKVDGKKVDLCIWDTAGQ 65
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
E+FR L SSYYRGA GIIL YDVT+R+TF NL + W EV+ ++ + VK+LVGNK+D+
Sbjct: 66 EKFRALISSYYRGAHGIILTYDVTKRDTFENL-NYWLNEVENFANRSNLVKLLVGNKIDK 124
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R +SREEG AK+ LF+ECSAKT+ ++Q FE+LA KI+E P + S+ ++
Sbjct: 125 EN-REISREEGAEFAKKKAMLFIECSAKTKIGIQQAFEELAQKIIESPQNTQSSSSSSQQ 183
Query: 193 NILKQKPENQSPPIGGC 209
K E + P GC
Sbjct: 184 RQKTVKIEEEEPQYQGC 200
>gi|406695666|gb|EKC98968.1| putative Ras-related protein Rab-18 [Trichosporon asahii var.
asahii CBS 8904]
Length = 222
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 105/212 (49%), Positives = 136/212 (64%), Gaps = 19/212 (8%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ K+LLIG+S VGKSSLL+ F S ++ + TIGVDFK+K + V G+R KL+IWDTA
Sbjct: 12 NLKLLLIGNSSVGKSSLLLRFTDDDFLSEEETAATIGVDFKVKSVEVDGRRYKLSIWDTA 71
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGAQG+ILVYDV++R TF L W +E++ Y +D VK++VGNKV
Sbjct: 72 GQERFRTLTSSYYRGAQGVILVYDVSQRNTFDELIK-WFREIETYCA-EDVVKIIVGNKV 129
Query: 131 DR-------------DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
D+ + R V+ EEG A A G+LF+ECSAKTR V F++L +I+
Sbjct: 130 DKVTLVAMRRADESQEFTRQVTTEEGQAFADRMGTLFMECSAKTRVGVNDAFQELVRRIL 189
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
E PSL G V R Q E+ + GC
Sbjct: 190 ETPSLWTRGPQPV-RTPNVQLQEDAPGYLSGC 220
>gi|294949450|ref|XP_002786203.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239900360|gb|EER17999.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 205
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 102/206 (49%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT RE+F N+ W +E+D Y+T ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF----EQLALKIMEVPSLLEE 185
D S++VV+ +EG LA + G FLE SAK NVEQ F ++ ++ P
Sbjct: 123 TDLTSKKVVTYDEGKELADQLGVPFLETSAKNSHNVEQAFIEMSSEIKSRVKTAPQPNRS 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
G+ + + NQS GCCS
Sbjct: 183 GAGAARLRPGQPAHGNQS----GCCS 204
>gi|389582066|dbj|GAB64466.1| small GTPase Rab18 [Plasmodium cynomolgi strain B]
Length = 201
Score = 184 bits (467), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 100/200 (50%), Positives = 137/200 (68%), Gaps = 6/200 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + ++ + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELS- 181
Query: 188 NVVKRNI-LKQKPENQSPPI 206
+V +N+ L +K EN++ +
Sbjct: 182 -IVTKNLKLSKKEENRANCV 200
>gi|343172006|gb|AEL98707.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/108 (78%), Positives = 98/108 (90%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K + + GK+LKL IWDTA
Sbjct: 3 FDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL DVWAKE+DLYSTN
Sbjct: 63 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRDVWAKEIDLYSTN 110
>gi|374081854|ref|NP_001243339.1| ras-related protein Rab-18 isoform 2 [Homo sapiens]
gi|332240538|ref|XP_003269444.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Nomascus
leucogenys]
gi|332833817|ref|XP_507716.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Pan troglodytes]
gi|397501615|ref|XP_003821476.1| PREDICTED: ras-related protein Rab-18 isoform 3 [Pan paniscus]
gi|51599149|gb|AAU08232.1| RAB18 long isoform 1 [Homo sapiens]
Length = 235
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 128/201 (63%), Gaps = 32/201 (15%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIW----- 67
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQ 67
Query: 68 ------------------------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 103
DTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF
Sbjct: 68 QTANFFLKSQIGNSPILKWAMWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 127
Query: 104 LSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRE 163
L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A++H LF+E SAKT +
Sbjct: 128 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 185
Query: 164 NVEQCFEQLALKIMEVPSLLE 184
V+ FE+L KI++ P L E
Sbjct: 186 GVQCAFEELVEKIIQTPGLWE 206
>gi|426364300|ref|XP_004049256.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Gorilla gorilla
gorilla]
Length = 235
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 128/201 (63%), Gaps = 32/201 (15%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIW----- 67
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHQ 67
Query: 68 ------------------------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 103
DTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF
Sbjct: 68 QTANFFLKSQIGNSPILKWAIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 127
Query: 104 LSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRE 163
L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A++H LF+E SAKT +
Sbjct: 128 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 185
Query: 164 NVEQCFEQLALKIMEVPSLLE 184
V+ FE+L KI++ P L E
Sbjct: 186 GVQCAFEELVEKIIQTPGLWE 206
>gi|331234359|ref|XP_003329839.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309308829|gb|EFP85420.1| hypothetical protein PGTG_11776 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 236
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 95/173 (54%), Positives = 125/173 (72%), Gaps = 5/173 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ K+LLIG S VGKSSLL+ F S ++ S TIGVDFK KL+ GKR KL+IWDTA
Sbjct: 30 TLKLLLIGSSSVGKSSLLLRFTDQVFLSAEESSATIGVDFKFKLIDHKGKRYKLSIWDTA 89
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS-TNQDCVKMLVGNK 129
GQERFRTLTSSYYRGAQG++LVYDVT R +F +L W E+D ++ + QD V+++VGNK
Sbjct: 90 GQERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPS-WFSELDTFAHSPQDVVRVIVGNK 148
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
VD+D R VS +EG A A ++ ++F E S KTR+ V++ FE + KI++ SL
Sbjct: 149 VDKDESRTVSTDEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIIDSISL 201
>gi|256073243|ref|XP_002572941.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|1016750|gb|AAA79138.1| rab-related GTP-binding protein [Schistosoma mansoni]
gi|353230960|emb|CCD77377.1| rab-related GTP-binding protein [Schistosoma mansoni]
Length = 205
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 132/204 (64%), Gaps = 7/204 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYD FKILLIGDSGVGK+ LLV ++ S V TIG+DFKIK + + GK++KL IWD
Sbjct: 5 SYDALFKILLIGDSGVGKTCLLVRYVEESFVPTFISTIGIDFKIKTIELEGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+TSSYYRGA GI+L+YD+T R+TF N+ W ++N + K+L+ N
Sbjct: 65 TAGQERFHTITSSYYRGAMGIMLIYDITSRQTFDNV-QTWMNRTFSLASN-EVEKLLIAN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL-LEEGS 187
K D RVVS EEG A+E+G FLE SAK+ NV + FE+L I+ S+ E S
Sbjct: 123 KCDMAHNRVVSYEEGRQKAEEYGIGFLETSAKSSTNVHKAFEELTRAILHNSSIRRHESS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCCS 211
V + + L + P + S G CCS
Sbjct: 183 TVTQVHRLAEPPNSIS---GTCCS 203
>gi|403295007|ref|XP_003938448.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 235
Score = 183 bits (464), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 128/201 (63%), Gaps = 32/201 (15%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIW----- 67
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVTLHW 67
Query: 68 ------------------------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 103
DTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF
Sbjct: 68 QTENFFLKGQIGFSPDLKWPIWQSDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 127
Query: 104 LSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRE 163
L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A++H LF+E SAKT +
Sbjct: 128 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 185
Query: 164 NVEQCFEQLALKIMEVPSLLE 184
V+ FE+L KI++ P L E
Sbjct: 186 GVQCAFEELVEKIIQTPGLWE 206
>gi|170579409|ref|XP_001894818.1| Ras-related protein Rab-18A [Brugia malayi]
gi|158598441|gb|EDP36329.1| Ras-related protein Rab-18A, putative [Brugia malayi]
Length = 194
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 123/172 (71%), Gaps = 9/172 (5%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSL++ F+ + D +++ TIGVDF++ + V R DTAGQ
Sbjct: 10 TLKILIIGESGVGKSSLMLRFVDDTFDPEIAATIGVDFRVTSMMVNQNR------DTAGQ 63
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+I VYDV+ R+TF LS W EVD YST D VKML+GNK+D
Sbjct: 64 ERFRTLTPSYYRGAQGVICVYDVSNRQTFERLSH-WMNEVDTYSTKTDAVKMLIGNKIDI 122
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
S R V+REEG+ AK+H LF+E SAKTRE V+ FE+L K+++ P L +
Sbjct: 123 -SSREVTREEGLEFAKKHRMLFIEASAKTREGVQCAFEELIEKVLQTPGLWD 173
>gi|302782443|ref|XP_002972995.1| rab family GTPase [Selaginella moellendorffii]
gi|302805428|ref|XP_002984465.1| rab family GTPase [Selaginella moellendorffii]
gi|300147853|gb|EFJ14515.1| rab family GTPase [Selaginella moellendorffii]
gi|300159596|gb|EFJ26216.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 182 bits (463), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 104/205 (50%), Positives = 132/205 (64%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEE 185
D +++VV + A A E G FLE SAK NVEQ F +A +I P++
Sbjct: 123 ADLTAKKVVDTQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSN 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
N V N K +P NQ GGCC
Sbjct: 183 KPNNVSLN--KGQPLNQK---GGCC 202
>gi|353239644|emb|CCA71547.1| probable Ras-related protein Rab-18 [Piriformospora indica DSM
11827]
Length = 218
Score = 182 bits (463), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 129/194 (66%), Gaps = 6/194 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+ K+LLIG+S VGKSSLL+ F + D+ S TIGVDF++ + + G+R+KL+IWDTA
Sbjct: 9 NLKLLLIGNSSVGKSSLLMRFTDAQFLPEDESSATIGVDFRVCKMEIGGRRVKLSIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGAQGII+ YD++ RETF L W E+D Y T VKMLVGNK+
Sbjct: 69 GQERFRTITSSYYRGAQGIIVAYDISNRETFDALPR-WFTELDTYVT-PSVVKMLVGNKL 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D++ R VS +EG A+ +G LFLE SAKT V + F++L KI++ P L + +
Sbjct: 127 DKEFSRAVSEDEGRKFAQRNGCLFLEASAKTNVGVREAFQELVEKILDTPELWAPAAPRI 186
Query: 191 KRNILKQKPENQSP 204
+ KP+ P
Sbjct: 187 T-STATAKPQQSMP 199
>gi|183235021|ref|XP_649033.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169800780|gb|EAL43647.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709560|gb|EMD48804.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 199
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 130/204 (63%), Gaps = 7/204 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ +D FKIL+IGDSGVGKS LL+ F D TIGVDFKIK L + G+ +KL I
Sbjct: 2 AQEFDYLFKILMIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F ++ W E++ + + + VKML+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDVQSFNHIRQ-WLNEIE-GNASPNVVKMLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D+D+ + VS E+ AK+ G F E SAK NVE F +LA ++ + ++E
Sbjct: 120 GNKADKDATKAVSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELA---QDIKNQMKET 176
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
V N+ KPE Q P GCC
Sbjct: 177 PRVTPDNVAI-KPEVQQEPQPGCC 199
>gi|443710459|gb|ELU04712.1| hypothetical protein CAPTEDRAFT_155110 [Capitella teleta]
Length = 198
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 135/203 (66%), Gaps = 11/203 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ LL F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+S W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKTFDNISK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGS 187
K D + +R V ++ G ++A+EHG FLE SAK+ NVE+ F LA I+ + PS +G
Sbjct: 123 KCDIEDKRQVPKQRGESIAREHGIPFLETSAKSNVNVEKAFMDLAQAILNKTPSKDADGH 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
N K ++S G CC
Sbjct: 183 N-------KAVDIHKSESKGRCC 198
>gi|156095590|ref|XP_001613830.1| small GTPase Rab1A [Plasmodium vivax Sal-1]
gi|148802704|gb|EDL44103.1| small GTPase Rab1A, putative [Plasmodium vivax]
Length = 200
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 132/204 (64%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++SYD FKILLIGDSGVGKS LL+ F + D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGII+VYDVT R++F N+ + W E++ Y++ +D K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKVLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK+D ++R VS EEG LA FLE SAK NVEQ F+ +A +I L +
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQLENQQ 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
V N L KP + CC
Sbjct: 180 KGRVNIN-LNAKPIKDNKK--KCC 200
>gi|195042188|ref|XP_001991383.1| GH12621 [Drosophila grimshawi]
gi|193901141|gb|EDW00008.1| GH12621 [Drosophila grimshawi]
Length = 204
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 137/203 (67%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVV++E G A+A+EH F+E SAK+ N+E+ F +LA I++ + E N
Sbjct: 123 KCDMTDKRVVNKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTAGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ + +++P CC+
Sbjct: 183 -PERVVIDRGNSDKAPGYNKCCA 204
>gi|156094918|ref|XP_001613495.1| small GTPase Rab18 [Plasmodium vivax Sal-1]
gi|148802369|gb|EDL43768.1| small GTPase Rab18, putative [Plasmodium vivax]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 99/200 (49%), Positives = 137/200 (68%), Gaps = 6/200 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + ++ + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKANHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELS- 181
Query: 188 NVVKRNI-LKQKPENQSPPI 206
+V +N+ L +K E+++ +
Sbjct: 182 -IVTKNLKLSKKEESRANCV 200
>gi|115434888|ref|NP_001042202.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|113531733|dbj|BAF04116.1| Os01g0179700 [Oryza sativa Japonica Group]
gi|125524668|gb|EAY72782.1| hypothetical protein OsI_00645 [Oryza sativa Indica Group]
gi|125569264|gb|EAZ10779.1| hypothetical protein OsJ_00614 [Oryza sativa Japonica Group]
gi|215697672|dbj|BAG91666.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765495|dbj|BAG87192.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 203
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A I + + SN
Sbjct: 123 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAASNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPPTVQIRGQPVNQKT---SCCS 202
>gi|124512632|ref|XP_001349449.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
gi|19310063|emb|CAD27350.1| Rab18 GTPase [Plasmodium falciparum]
gi|23499218|emb|CAD51298.1| PfRab18, GTPase [Plasmodium falciparum 3D7]
Length = 201
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/197 (50%), Positives = 136/197 (69%), Gaps = 6/197 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + ++ + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWINEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLELS- 181
Query: 188 NVVKRNI-LKQKPENQS 203
+V +N+ L +K E++S
Sbjct: 182 -IVTKNLKLGKKEESRS 197
>gi|390465163|ref|XP_003733352.1| PREDICTED: uncharacterized protein LOC100402013 [Callithrix
jacchus]
Length = 235
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 127/201 (63%), Gaps = 32/201 (15%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIW----- 67
+ K L+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKFLIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWVSLHQ 67
Query: 68 ------------------------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 103
DTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF
Sbjct: 68 HTKNFFLKGQIGFRPTLKWPIWQYDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 127
Query: 104 LSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRE 163
L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A++H LF+E SAKT +
Sbjct: 128 L-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 185
Query: 164 NVEQCFEQLALKIMEVPSLLE 184
V+ FE+L KI++ P L E
Sbjct: 186 GVQCAFEELVEKIIQTPGLWE 206
>gi|350538481|ref|NP_001233833.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053067|gb|AAA80680.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R VS + A A E G F+E SAK+ NVEQ F +A +I + +N
Sbjct: 123 SDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 KPPTVQIRGQPVNQK---NGCCS 202
>gi|56753826|gb|AAW25110.1| SJCHGC06157 protein [Schistosoma japonicum]
Length = 211
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVA-GKRLKLTIWDTA 70
++FK+LLIGDSGVGKSSLL+ + + + LS TIGVDFK+KL+TV G ++KL+IWDTA
Sbjct: 10 INFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLT + YRG+ + VYDV RE+F NL +W +E+ YS N + +K+LVGNK+
Sbjct: 70 GQERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IWMEELKTYSDNPNMIKLLVGNKI 128
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG---- 186
D R++SREEG+ A+ + + E SAKT E V Q F + KI L +G
Sbjct: 129 D-SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQGKKRA 187
Query: 187 -SNVVKRNILKQKPENQSPPIGGCCS 211
SN R L E QS GCCS
Sbjct: 188 LSNESNRANLTSSQEMQSH--SGCCS 211
>gi|255539911|ref|XP_002511020.1| protein with unknown function [Ricinus communis]
gi|223550135|gb|EEF51622.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A I + +N
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKNRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 RPPTVQIRGQPVNQK---SGCCS 202
>gi|388490950|gb|AFK33541.1| unknown [Medicago truncatula]
Length = 122
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 80/121 (66%), Positives = 101/121 (83%)
Query: 91 LVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEH 150
+VYDVTRRETFTNLSD+WAKE+DLYSTNQDC+KMLVGNKVD++SER V+++E + A+++
Sbjct: 1 MVYDVTRRETFTNLSDIWAKEIDLYSTNQDCIKMLVGNKVDKESERAVTKKEAVDFARQY 60
Query: 151 GSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
G L+ ECSAKTR NVEQCFE+L +KI++ PSLL EGS+ VK+NI KQKP+ CC
Sbjct: 61 GCLYTECSAKTRVNVEQCFEELVMKILDTPSLLAEGSSGVKKNIFKQKPQEFDASPSSCC 120
Query: 211 S 211
S
Sbjct: 121 S 121
>gi|7643790|gb|AAF65510.1| small GTP-binding protein [Capsicum annuum]
Length = 203
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDITDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R VS + A A E G F+E SAK+ NVEQ F +A +I + +N
Sbjct: 123 SDLNDNRAVSYDTAKAFADEIGIPFMEASAKSATNVEQAFMAMAAEIKNRMATQPASNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 KPPTVQIRGQPVNQK---SGCCS 202
>gi|195134256|ref|XP_002011553.1| GI11034 [Drosophila mojavensis]
gi|193906676|gb|EDW05543.1| GI11034 [Drosophila mojavensis]
Length = 204
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 136/203 (66%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVVS+E G A+A+EH F+E SAK+ N+E+ F +LA I++ S E N
Sbjct: 123 KCDMSDKRVVSKERGEAIAREHSIRFMETSAKSNINIERAFCELAEAILDKTSGRESAEN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
+R ++ + +++ CC+
Sbjct: 183 -PERVVIDRGNSDKATSYSKCCA 204
>gi|124506171|ref|XP_001351683.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
gi|13375179|emb|CAC34553.1| putative GTPase [Plasmodium falciparum 3D7]
gi|23504611|emb|CAD51490.1| Rab1b, GTPase [Plasmodium falciparum 3D7]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 133/205 (64%), Gaps = 8/205 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++SYD FKILLIGDSGVGKS LL+ F + D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGII+VYDVT R++F N+ + W E++ Y++ +D K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK+D ++R VS EEG LA FLE SAK NVEQ F+ +A +I E
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAYEIKNKSQ--HET 177
Query: 187 SNVVKRNI-LKQKPENQSPPIGGCC 210
N K NI L +P + CC
Sbjct: 178 INKGKTNINLNARPIKDTKK--KCC 200
>gi|198418247|ref|XP_002129883.1| PREDICTED: similar to Ras-related protein Rab-10 [Ciona
intestinalis]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 135/203 (66%), Gaps = 8/203 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + ++ +++ +D KML+GN
Sbjct: 65 TAGQERFHTITTSYYRGANGIMLVYDITNTKSFENISK-WLRNIEEHAS-EDVEKMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +R++S+E G +AKEHG F E SAK N+E F LA I+ + E G+
Sbjct: 123 KCDMEDKRMISKERGEMIAKEHGIKFYETSAKNNINIETAFIALATDILHKTPVKETGAG 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
++ +Q+ ++S CCS
Sbjct: 183 SAGVDVTQQRQSSRS-----CCS 200
>gi|343172008|gb|AEL98708.1| Ras-like protein, partial [Silene latifolia]
Length = 110
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 84/108 (77%), Positives = 97/108 (89%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
+D FK+L+IGDSGVGKSSLL+SF S + +DLSPTIGVDFK+K + + GK+LKL IWDTA
Sbjct: 3 FDYLFKLLMIGDSGVGKSSLLLSFTSDTFEDLSPTIGVDFKVKYVNMGGKKLKLAIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNL VWAKE+DLYSTN
Sbjct: 63 GQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLRGVWAKEIDLYSTN 110
>gi|388506692|gb|AFK41412.1| unknown [Medicago truncatula]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VVS E A A E G F+E SAK NVEQ F +A +I + S
Sbjct: 123 SDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSAR 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PATVQIRGQPVNQK---AGCCS 201
>gi|224138704|ref|XP_002326669.1| predicted protein [Populus trichocarpa]
gi|222833991|gb|EEE72468.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADGSYLDSYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I + +N
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFIETSAKNSTNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ+ GCCS
Sbjct: 183 RPPTVQIRGQPVNQN---SGCCS 202
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 181 bits (458), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/204 (46%), Positives = 137/204 (67%), Gaps = 11/204 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE--EG 186
K D + +RVVS E+G A+A+EHG F+E SAK N+++ F +LA I++ E +
Sbjct: 123 KSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGKEPQDA 182
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
++ V NI +++ N+ CC
Sbjct: 183 ADRVTVNIPRERNSNR------CC 200
>gi|327275917|ref|XP_003222718.1| PREDICTED: ras-related protein Rab-18-B-like [Anolis carolinensis]
Length = 212
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/181 (52%), Positives = 128/181 (70%), Gaps = 5/181 (2%)
Query: 4 SSGQSNSYDL-SFKILLIGDSGVGKSSLLVSFISSSVDDL-SPTIGVDFKIKLLTVAGKR 61
S+ Q ++ L + K+LLIGDSGVGKSSLL+ F + PTIGVDFKIK + V
Sbjct: 5 STPQESATSLPTLKLLLIGDSGVGKSSLLLRFTEDQFEPYRKPTIGVDFKIKKVIVGDLP 64
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
L++ IWDTAGQERFRTLT SYYRGAQGIILVYDVTRRETF L + W +E++++ T ++
Sbjct: 65 LQVAIWDTAGQERFRTLTPSYYRGAQGIILVYDVTRRETFLGL-ESWLQELEVF-TKKEV 122
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
VK+LVGNK+D ++ V R EG+ A+ H LF E SAK + V+ F+++ ++I++ P
Sbjct: 123 VKILVGNKID-ETRHEVERREGLRFARRHSLLFAEASAKMKYGVQNIFDEVVIRILQTPG 181
Query: 182 L 182
L
Sbjct: 182 L 182
>gi|217071342|gb|ACJ84031.1| unknown [Medicago truncatula]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 128/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VVS E A A E G F+E SAK NVEQ F +A +I + S
Sbjct: 123 SDLSDKKVVSSETAKAFADEIGIPFMETSAKNASNVEQAFMAMAAEIKNRMASQPANSAR 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PATVQIRGQPVNQK---AGCCS 201
>gi|297599697|ref|NP_001047606.2| Os02g0653800 [Oryza sativa Japonica Group]
gi|14140133|emb|CAC39050.1| putative GTP-binding protein [Oryza sativa]
gi|49387522|dbj|BAD24987.1| putative GTP-binding protein YPTM2 [Oryza sativa Japonica Group]
gi|215769313|dbj|BAH01542.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222623360|gb|EEE57492.1| hypothetical protein OsJ_07768 [Oryza sativa Japonica Group]
gi|255671140|dbj|BAF09520.2| Os02g0653800 [Oryza sativa Japonica Group]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 123 SDLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPPTVQIRGQPVNQKT---SCCS 202
>gi|224136446|ref|XP_002326862.1| predicted protein [Populus trichocarpa]
gi|118483707|gb|ABK93747.1| unknown [Populus trichocarpa]
gi|222835177|gb|EEE73612.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 13/206 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSLLEE 185
D S +VVS E+ A A E G F+E SAK NVEQ F ++ I + P++
Sbjct: 123 SDLTSNKVVSYEQAKAFADEIGIPFMETSAKDATNVEQAFMAMSAAIKDRMASQPAMNNA 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
+ V+ K +P Q GGCCS
Sbjct: 183 KPSTVQ---FKGQPVEQK---GGCCS 202
>gi|225454983|ref|XP_002281150.1| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
gi|297744977|emb|CBI38569.3| unnamed protein product [Vitis vinifera]
Length = 203
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A I + +N
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAADIKTRMASQPAMNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
++ L+ +P NQ GCCS
Sbjct: 183 RPPSVQLQGQPVNQK---SGCCS 202
>gi|221057099|ref|XP_002259687.1| GTPase [Plasmodium knowlesi strain H]
gi|193809759|emb|CAQ40461.1| GTPase, putative [Plasmodium knowlesi strain H]
Length = 200
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 123/176 (69%), Gaps = 3/176 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++SYD FKILLIGDSGVGKS LL+ F + D TIGVDFKIK + + K +KL I
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIKTIEIEDKIIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGII+VYDVT R++F N+ + W E++ Y++ +D K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKYAS-EDVQKILI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
GNK+D ++R VS EEG LA FLE SAK NVEQ F+ +A +I L
Sbjct: 120 GNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNVEQAFKTMAHEIKNKSQL 175
>gi|116782376|gb|ABK22484.1| unknown [Picea sitchensis]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 7/206 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 TTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D +RVV ++ + A E G FLE SAK NVEQ F +A ++ + S L E
Sbjct: 120 GNKCDMAEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFITMAGEVKRRMASQLTE 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
G+ +K +P Q G CCS
Sbjct: 180 GNRKTNTVEMKGQPLQQK---GSCCS 202
>gi|159795493|pdb|2RHD|A Chain A, Crystal Structure Of Cryptosporidium Parvum Small Gtpase
Rab1a
Length = 175
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 95/172 (55%), Positives = 121/172 (70%), Gaps = 3/172 (1%)
Query: 6 GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKL 64
G + YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ +++ K +KL
Sbjct: 1 GMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTISLENKTVKL 60
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT R++F N+ W +E+D Y+ ++ K+
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIIVYDVTDRDSFDNVKQ-WIQEIDRYAM-ENVNKL 118
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
LVGNK D S+RVV+ +EG LA HG F+E SAK NVEQ F +A +I
Sbjct: 119 LVGNKCDLVSKRVVTSDEGRELADSHGIKFIETSAKNAYNVEQAFHTMAGEI 170
>gi|294883408|ref|XP_002770925.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
gi|239874051|gb|EER02741.1| RAS small GTpases RIC1/ypt1, putative [Perkinsus marinus ATCC
50983]
Length = 211
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 104/207 (50%), Positives = 133/207 (64%), Gaps = 12/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 10 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 69
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT RE+F N+ W +E+D Y+T ++ K+LVGNK
Sbjct: 70 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKH-WVQEIDKYAT-ENVSKLLVGNK 127
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEVPSLLEE 185
D S++VV+ +EG LA + G FLE SAK NVEQ F +++ ++ P
Sbjct: 128 SDLTSKKVVTYDEGKELADQLGISFLETSAKNSHNVEQAFIEMSRGIKSRVKTTPQPSRS 187
Query: 186 GSNVVKRNILKQKPE-NQSPPIGGCCS 211
G+ R Q NQS GCCS
Sbjct: 188 GAGGPARLRPGQPAHGNQS----GCCS 210
>gi|307213108|gb|EFN88630.1| Ras-related protein Rab-10 [Harpegnathos saltator]
Length = 200
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDEAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVVS E+G A+A+EHG F+E SAK N++Q F +LA I++
Sbjct: 123 KSDMEDKRVVSTEKGEAIAREHGIRFMETSAKANINIDQAFSELAEAILD 172
>gi|390979747|gb|AFM30910.1| small GTPase [Hevea brasiliensis]
Length = 203
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVE+ F +A I + +N
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEEAFMAMAADIKNRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 RPPTVQIRGQPVNQK---SGCCS 202
>gi|68075529|ref|XP_679683.1| Rab18 GTPase [Plasmodium berghei strain ANKA]
gi|56500482|emb|CAH95262.1| Rab18 GTPase, putative [Plasmodium berghei]
Length = 201
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 124/177 (70%), Gaps = 3/177 (1%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + ++ + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEEKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLE 179
>gi|357631253|gb|EHJ78843.1| small GTP-binding protein Rab10 [Danaus plexippus]
Length = 206
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 89/183 (48%), Positives = 130/183 (71%), Gaps = 3/183 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDNHFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF ++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFDDIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVVS+E G A+A+EHG F+E SAK+ N+E+ F +LA I++ + E ++
Sbjct: 123 KCDMEDKRVVSKERGEAIAREHGIRFMETSAKSNTNIERAFSELAEAILDKSAGREAEAD 182
Query: 189 VVK 191
+ +
Sbjct: 183 LAR 185
>gi|242066528|ref|XP_002454553.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|194691170|gb|ACF79669.1| unknown [Zea mays]
gi|219887101|gb|ACL53925.1| unknown [Zea mays]
gi|241934384|gb|EES07529.1| hypothetical protein SORBIDRAFT_04g033160 [Sorghum bicolor]
gi|413938047|gb|AFW72598.1| GTP-binding protein YPTM2 isoform 1 [Zea mays]
gi|413938048|gb|AFW72599.1| GTP-binding protein YPTM2 isoform 2 [Zea mays]
Length = 203
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV+ E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 123 SDLTANKVVATETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPATVQIRGQPVNQKT---SCCS 202
>gi|168029477|ref|XP_001767252.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681507|gb|EDQ67933.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 204
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 128/202 (63%), Gaps = 3/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VV E A A E G FLE SAK NVEQ F +A +I + S+
Sbjct: 123 SDLASKKVVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSST 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
K N + P GCCS
Sbjct: 183 SKPNNVTNLRGQAIPQKSGCCS 204
>gi|303750|dbj|BAA02116.1| GTP-binding protein [Pisum sativum]
gi|738940|prf||2001457H GTP-binding protein
Length = 202
Score = 180 bits (456), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 130/204 (63%), Gaps = 10/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +VVS E A A E G F+E SAK NVEQ F +A +I + + SN
Sbjct: 123 SDLADNKVVSSETAKAFADEIGIPFMETSAKNANNVEQAFMAMAAEIKN--RMASQPSNN 180
Query: 190 VKRNI--LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 181 ARPPTVQIRGQPVNQK---SGCCS 201
>gi|350538277|ref|NP_001233823.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053063|gb|AAA80678.1| small GTP-binding protein [Solanum lycopersicum]
Length = 203
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSRLLLRFADDSYLESYISTIGVDFKIRTVDQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VVS E A A E G F+E SAK NVEQ F +A I + +N
Sbjct: 123 CDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 RPPTVQIRGQPVNQK---SGCCS 202
>gi|4586580|dbj|BAA76422.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 202
Score = 179 bits (455), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 126/213 (59%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLAANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPANNARPPTVQIRGQPMNQKSGCCS 201
>gi|300175138|emb|CBK20449.2| unnamed protein product [Blastocystis hominis]
Length = 202
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 130/204 (63%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
++ YD FK+LLIGDSGVGKS LL+ F D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDQYSDCYITTIGVDFKIRTVDLDGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y+ N++ VK+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVK-TWLHEIDRYA-NENVVKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +++VVS E A G F+E SAK NVE F +A +IM+ + ++ G
Sbjct: 120 GNKADLTAKKVVSYETAKEFADSLGIEFVETSAKNSTNVETAFMTMAREIMQKNASVQSG 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
K ++ + +S GCC
Sbjct: 180 PKGAKPTVVPSAAKKESK---GCC 200
>gi|224063625|ref|XP_002301234.1| predicted protein [Populus trichocarpa]
gi|222842960|gb|EEE80507.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 13/206 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSLLEE 185
D + +VVS E A A E G F+E SAK NVEQ F +A I + P++
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAAAIKDRMASQPAMNNA 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
+ V+ L+ +P Q GGCCS
Sbjct: 183 KPSTVQ---LRGQPVEQK---GGCCS 202
>gi|1448941|gb|AAB04618.1| ypt-related protein [Brassica rapa subsp. campestris]
Length = 206
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 106/209 (50%), Positives = 130/209 (62%), Gaps = 12/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F + +D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D Y+ + C K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYANDSVC-KLLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-----EVPS 181
GNK D +VVS E G ALA E G FLE SAK NVEQ F +A +I +
Sbjct: 120 GNKNDMVESKVVSTETGKALADELGIPFLETSAKDSTNVEQAFLTIAGEIKKKMGSHTNA 179
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
GS V+ +K +P Q+ GGCC
Sbjct: 180 NKTSGSGTVQ---MKGQPIQQNNG-GGCC 204
>gi|393214870|gb|EJD00362.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 234
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 101/194 (52%), Positives = 130/194 (67%), Gaps = 7/194 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKL 64
S+S ++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + + GK++KL
Sbjct: 11 SDSSPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEINGKKVKL 70
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
+IWDTAGQERFRT+TSSYYRGAQGIILVYDV RE+F L W E+ Y ++ VK+
Sbjct: 71 SIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFAALPR-WYSELGTYVSDS-VVKI 128
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
LVGNKVD++ R V EG A A+ GSLF+E SAKT V + F + +I++ P L
Sbjct: 129 LVGNKVDKEFSRQVPTSEGAAFAQRMGSLFVEASAKTAVGVREAFTDVVERILDTPELWA 188
Query: 185 EGSNVVK-RN-ILK 196
SNV RN ILK
Sbjct: 189 PVSNVTPDRNAILK 202
>gi|70947149|ref|XP_743217.1| Rab18 GTPase [Plasmodium chabaudi chabaudi]
gi|56522611|emb|CAH89069.1| Rab18 GTPase, putative [Plasmodium chabaudi chabaudi]
Length = 200
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 97/187 (51%), Positives = 129/187 (68%), Gaps = 6/187 (3%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
N YD K+LL+GDS VGKSS+L + + + + TIG+DFK+K L + K +K+ IW
Sbjct: 5 NKYDYLLKLLLVGDSSVGKSSILCRYSDNQFEKKVLSTIGIDFKVKYLKIDNKTIKVGIW 64
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTS+YYR A IILVYD T RE+F NL DVW E+D YSTN++ +KMLV
Sbjct: 65 DTAGQERFRTLTSAYYRNAHAIILVYDCTVRESFENL-DVWIHEIDKYSTNKNAIKMLVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK+D+ + V+++EG A E+ LF E SAK N+ CFE+L +I+ PSLLE
Sbjct: 124 NKIDKPNHE-VTKDEGKNFAFENNMLFCETSAKNDINITYCFEELIQQILNNPSLLE--- 179
Query: 188 NVVKRNI 194
+VV +N+
Sbjct: 180 SVVTKNL 186
>gi|393244988|gb|EJD52499.1| ras-domain-containing protein [Auricularia delicata TFB-10046 SS5]
Length = 228
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 125/183 (68%), Gaps = 5/183 (2%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLK 63
Q + ++ K+L+IG+S VGKSSLL+ F D+ S TIGVDF++ + V GK++K
Sbjct: 8 QPAAPPINCKLLIIGNSSVGKSSLLLRFTDEQWLPEDESSATIGVDFRVCKMEVKGKKVK 67
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L+IWDTAGQERFRT+TSSYYRGAQGI LVYDV+ RE+F L W E++ Y + VK
Sbjct: 68 LSIWDTAGQERFRTITSSYYRGAQGIFLVYDVSNRESFDALPR-WFSELETY-VSSSVVK 125
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
MLVGNK+D++ R VSREEG A G LF+E SAKT NV + F ++ KI++ P L
Sbjct: 126 MLVGNKLDKEFSRTVSREEGQKFADRMGCLFVESSAKTAANVREAFVEMVEKILDTPELW 185
Query: 184 EEG 186
+ G
Sbjct: 186 QPG 188
>gi|166235969|gb|ABY85791.1| GTPase Rab1 [Larix kaempferi]
Length = 203
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 132/206 (64%), Gaps = 6/206 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 TTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELDGKAIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y+++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASDS-VSKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D +RVV ++ + A E G FLE SAK NVEQ F +A ++ + S L E
Sbjct: 120 GNKCDMTEKRVVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTE 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
G+ K N ++ K + G CCS
Sbjct: 180 GNR--KANTIEMKGQPLPQRGGSCCS 203
>gi|356568583|ref|XP_003552490.1| PREDICTED: ras-related protein RABD2a-like [Glycine max]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 125/213 (58%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++ R VS E A A E G F+E SAK NVEQ F +A I
Sbjct: 123 CDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GGCCS
Sbjct: 170 -KDRMASQPANNARPPTVQIRGQPVAQKGGCCS 201
>gi|157167495|ref|XP_001654824.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|157167497|ref|XP_001654825.1| ras-related protein Rab-10, putative [Aedes aegypti]
gi|108882449|gb|EAT46674.1| AAEL002155-PA [Aedes aegypti]
gi|403182468|gb|EJY57406.1| AAEL002155-PB [Aedes aegypti]
Length = 204
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 133/203 (65%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +RVVS E G ++A+EH F+E SAK N+E+ F +LA I++ S E N
Sbjct: 123 KCDMTDKRVVSIERGESIAREHDIRFMETSAKANINIERAFRELAEAILDKTSGKETTDN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
R ++ + ++ P CC+
Sbjct: 183 -PDRVVVNRGTGDKPPAYKACCA 204
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 135/202 (66%), Gaps = 7/202 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQPKTFDNITK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +R++ +E G ++A+EHG FLE SAK+ NVE+ F LA I+ + +
Sbjct: 123 KCDMEDKRMIPKERGESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDSNPD 182
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
++ K+ +S GCC
Sbjct: 183 SSSVSVHKETSSRKS----GCC 200
>gi|356563370|ref|XP_003549937.1| PREDICTED: GTP-binding protein YPTM2-like isoform 1 [Glycine max]
Length = 202
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 126/213 (59%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTANKVVSSETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPVNNARPPTVQIRGQPVNQKAGCCS 201
>gi|449458992|ref|XP_004147230.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
gi|449517559|ref|XP_004165813.1| PREDICTED: GTP-binding protein YPTM2-like [Cucumis sativus]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 132/205 (64%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D + +VVS E A A E G F+E SAK+ NVEQ F +A +I M +
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEQAFMAMAAEIKNRMATQPMNNAR 182
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
V+ ++ +P NQ GCCS
Sbjct: 183 PPTVQ---IRGQPVNQK---SGCCS 201
>gi|388582980|gb|EIM23283.1| hypothetical protein WALSEDRAFT_15609 [Wallemia sebi CBS 633.66]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 95/177 (53%), Positives = 122/177 (68%), Gaps = 16/177 (9%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIW--- 67
+FK+LLIG+S VGKSSLL+ F + +D + TIGVDFK+K + + KR KL+IW
Sbjct: 19 AFKLLLIGNSSVGKSSLLLRFTENDFLPEEDANATIGVDFKVKYIQIKDKRYKLSIWCVF 78
Query: 68 --------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
+TAGQERFR+L SSYYRGAQG+ILVYDVT RETF L VW +E+D YST+
Sbjct: 79 ATHTHANFNTAGQERFRSLVSSYYRGAQGVILVYDVTNRETFDKLR-VWFQELDTYSTD- 136
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D VK++VGNK D + +R VS EE LA+ H ++F+ECSAKT V F +LA K+
Sbjct: 137 DAVKIVVGNKTDVNHQRAVSIEEAKELAELHNAMFVECSAKTSTGVNHLFYELAQKV 193
>gi|359806422|ref|NP_001241498.1| uncharacterized protein LOC100783333 [Glycine max]
gi|255636244|gb|ACU18462.1| unknown [Glycine max]
Length = 202
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 126/213 (59%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPVNNARPPTVQIRGQPVNQKAGCCS 201
>gi|91079074|ref|XP_975225.1| PREDICTED: similar to Rab-protein 10 CG17060-PA [Tribolium
castaneum]
gi|270003655|gb|EFA00103.1| hypothetical protein TcasGA2_TC002919 [Tribolium castaneum]
Length = 203
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 134/203 (66%), Gaps = 6/203 (2%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +R VS+E G +A+EHG F+E SAK N+++ F LA I++ + E G +
Sbjct: 123 KCDMSDKRTVSKERGETIAREHGIRFMETSAKANINIDKAFNDLAEAILDKTAGREPGDH 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
V + + +++ N S CC+
Sbjct: 183 VDRVLVDRKQQSNTSRS---CCN 202
>gi|56754975|gb|AAW25670.1| SJCHGC06150 protein [Schistosoma japonicum]
gi|226470410|emb|CAX70485.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485751|emb|CAX75295.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485753|emb|CAX75296.1| Rab-protein 10 [Schistosoma japonicum]
gi|226485755|emb|CAX75297.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 179 bits (454), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 132/203 (65%), Gaps = 7/203 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYD FK+LLIGDSGVGK+ LL+ ++ S TIG+DFKIK + + GK++KL IWD
Sbjct: 5 SYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+++YD+T R TF N+ W K + Y++ +D K++VGN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMMIYDITNRRTFDNIQ-TWMKNICDYAS-EDVEKLVVGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGS 187
K D D+ R VS EEG A+ H FLE SA T ENV + FE+L L I+ + P+ E S
Sbjct: 123 KCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRGHEPS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
V + + L ++S CC
Sbjct: 183 TVTQSHRLVDPLNSKSE---SCC 202
>gi|66518279|ref|XP_393723.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Apis mellifera]
gi|380028841|ref|XP_003698094.1| PREDICTED: ras-related protein Rab-10-like [Apis florea]
Length = 200
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVVS E G A+A+EHG F+E SAK N+++ F +LA I+E
Sbjct: 123 KSDMEDKRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|308081088|ref|NP_001183566.1| uncharacterized protein LOC100502159 [Zea mays]
gi|194700886|gb|ACF84527.1| unknown [Zea mays]
gi|238013122|gb|ACR37596.1| unknown [Zea mays]
gi|413923310|gb|AFW63242.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
gi|413938043|gb|AFW72594.1| hypothetical protein ZEAMMB73_730860 [Zea mays]
Length = 203
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV+ E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 123 SDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPATVQIRGQPVNQKT---SCCS 202
>gi|388520849|gb|AFK48486.1| unknown [Lotus japonicus]
Length = 202
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 126/213 (59%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPVNNARPPTVQIRGQPVNQKSGCCS 201
>gi|196011940|ref|XP_002115833.1| conserved hypothetical protein [Trichoplax adhaerens]
gi|190581609|gb|EDV21685.1| conserved hypothetical protein [Trichoplax adhaerens]
Length = 210
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/216 (46%), Positives = 138/216 (63%), Gaps = 22/216 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I + +++G
Sbjct: 118 GNKSDLESRRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQK---IQDG 174
Query: 187 SNVVKR--NILKQKPENQS----------PPIGGCC 210
+ + N +K P+N S P GGCC
Sbjct: 175 AFDINNEANGIKLGPQNPSNPSTSVPDRPPQSGGCC 210
>gi|162458854|ref|NP_001105441.1| GTP-binding protein YPTM2 [Zea mays]
gi|466172|sp|Q05737.1|YPTM2_MAIZE RecName: Full=GTP-binding protein YPTM2
gi|287835|emb|CAA44919.1| yptm2 [Zea mays]
Length = 203
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV+ E A A E G F+E SAK NV+Q F +A I + + +N
Sbjct: 123 SDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPATVQIRGQPVNQKT---SCCS 202
>gi|1370162|emb|CAA66447.1| RAB1A [Lotus japonicus]
gi|388504068|gb|AFK40100.1| unknown [Lotus japonicus]
Length = 201
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELQGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VV + A A E G FLE SAK NVEQ F +A +I + G
Sbjct: 120 GNKSDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPTG 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
S + +K +P P CC
Sbjct: 180 SKSAETVQMKGQP---IPQKSNCC 200
>gi|224057960|ref|XP_002299410.1| predicted protein [Populus trichocarpa]
gi|118481403|gb|ABK92644.1| unknown [Populus trichocarpa]
gi|222846668|gb|EEE84215.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 179 bits (453), Expect = 9e-43, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A I + +N
Sbjct: 123 SDLTANKVVSYETAKAFADEIGIPFMETSAKNAINVEQAFMAMAADIKNRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ+ GCCS
Sbjct: 183 RPPTVQIRGQPVNQNT---GCCS 202
>gi|383848303|ref|XP_003699791.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Megachile
rotundata]
Length = 200
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + RVVS E G A+A+EHG F+E SAK N+++ F +LA I+E
Sbjct: 123 KSDMEDRRVVSTERGEAIAREHGIRFMETSAKANINIDRAFSELAEAILE 172
>gi|432607|gb|AAB28535.1| ras-related GTP binding protein possessing GTPase activity [Oryza
sativa]
Length = 202
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/202 (50%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVS E G ALA E G FLE SAK NVE+ F +A +I + +G
Sbjct: 123 CDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEIKN--RMASQGRTN 180
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
+ Q P CCS
Sbjct: 181 ASKPATVQMPRQPVAQQSSCCS 202
>gi|308475031|ref|XP_003099735.1| CRE-RAB-10 protein [Caenorhabditis remanei]
gi|308266390|gb|EFP10343.1| CRE-RAB-10 protein [Caenorhabditis remanei]
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 133/202 (65%), Gaps = 8/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD+ FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D VKM++GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D RVVSRE G +A++HG F E SAK +V+ F LA I+ ++P +E S
Sbjct: 124 CDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPESTDEQSR 183
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+ Q+P + GGCC
Sbjct: 184 DTVNPVQPQRPGSS----GGCC 201
>gi|224074217|ref|XP_002304305.1| predicted protein [Populus trichocarpa]
gi|118485751|gb|ABK94725.1| unknown [Populus trichocarpa]
gi|222841737|gb|EEE79284.1| predicted protein [Populus trichocarpa]
Length = 203
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I + +N
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 RPPTVQIRGQPVNQK---SGCCS 202
>gi|17509233|ref|NP_491857.1| Protein RAB-10 [Caenorhabditis elegans]
gi|351062741|emb|CCD70773.1| Protein RAB-10 [Caenorhabditis elegans]
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 135/202 (66%), Gaps = 8/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD+ FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D VKM++GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D RVVSRE G +A++HG F E SAK +V+ F LA I+ ++P +E S
Sbjct: 124 CDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDEQS- 182
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+ + +P+ QS GGCC
Sbjct: 183 --RDTVNPVQPQRQSSS-GGCC 201
>gi|432953336|ref|XP_004085355.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV A G FLE SAK+ NVEQ F +A +I +
Sbjct: 123 CDLTTRKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ KP N SP GGCC
Sbjct: 183 EKSNVKIQSKPVNPSP--GGCC 202
>gi|357508061|ref|XP_003624319.1| Ras-like protein [Medicago truncatula]
gi|355499334|gb|AES80537.1| Ras-like protein [Medicago truncatula]
Length = 202
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 131/205 (63%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D SER VS + A A E G F+E SAK NVEQ F +A I + + + +N
Sbjct: 123 CDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD--RMASQPTNN 180
Query: 190 VKRNILKQKPENQSPPIG---GCCS 211
+ ++ + + P+G GCCS
Sbjct: 181 ARPPTVQIRGQ----PVGQKSGCCS 201
>gi|313231127|emb|CBY19125.1| unnamed protein product [Oikopleura dioica]
Length = 220
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/224 (44%), Positives = 141/224 (62%), Gaps = 18/224 (8%)
Query: 1 MGSSSGQSN--------SYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFK 51
M S++G S +YD FK+LLIGDSGVGK+ LL F +S + TIG+DFK
Sbjct: 1 MSSAAGSSTPTSIAAQKAYDYLFKLLLIGDSGVGKTCLLFRFAENSFNPTFISTIGIDFK 60
Query: 52 IKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKE 111
I+ + + GKR+KL +WDTAGQERFRT+T++YYRGA GI+LVYDVT ++TF N+++ W K
Sbjct: 61 IQTVEIDGKRIKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTSKKTFENITN-WLKN 119
Query: 112 VDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQ 171
++ ++ + ++LV NK D++ +RV+S E+G LA HG F+ECSA T ENV + F +
Sbjct: 120 IEEHAA-EGVEQLLVANKCDQEDKRVISEEQGQLLAVHHGIDFIECSAMTGENVREAFYR 178
Query: 172 LALKIMEVPSLLE-----EGSNVVKRNILKQKPENQSPPIGGCC 210
+A ++ E +GS VK IL +G CC
Sbjct: 179 MARRVKTKHESKESAQRADGSKSVK--ILSDPGSPLGKSLGNCC 220
>gi|303748|dbj|BAA02115.1| GTP-binding protein [Pisum sativum]
gi|738939|prf||2001457G GTP-binding protein
Length = 201
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/204 (50%), Positives = 125/204 (61%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+L+IGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLHEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VV + A A E G FLE SAK NVEQ F +A +I + G
Sbjct: 120 GNKCDLTENKVVQTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKKKMGSQPSG 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
S + +K +P P CC
Sbjct: 180 SKSAESVQMKGQP---IPQNNNCC 200
>gi|399163153|gb|AFP33152.1| rab-10, partial [Caenorhabditis elegans]
Length = 200
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 135/202 (66%), Gaps = 8/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD+ FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 5 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D VKM++GNK
Sbjct: 65 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D RVVSRE G +A++HG F E SAK +V+ F LA I+ ++P +E S
Sbjct: 123 CDMSDRRVVSRERGEKIAQDHGISFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDEQS- 181
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+ + +P+ QS GGCC
Sbjct: 182 --RDTVNPVQPQRQSSS-GGCC 200
>gi|405976260|gb|EKC40773.1| Ras-related protein Rab-10 [Crassostrea gigas]
Length = 212
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 91/169 (53%), Positives = 122/169 (72%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ LL F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVELGGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+S W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNPKTFENISK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D +++R VS++ G A+AKEH FLE SAK NVE+ F LA I+
Sbjct: 123 KCDMENKRQVSKDRGEAIAKEHEIPFLETSAKANINVEKAFMDLAQAIL 171
>gi|255581964|ref|XP_002531780.1| protein with unknown function [Ricinus communis]
gi|223528573|gb|EEF30594.1| protein with unknown function [Ricinus communis]
Length = 203
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK NVEQ F +A +I + +N
Sbjct: 123 NDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ GCCS
Sbjct: 183 RPPTVQIRGQPVNQK---SGCCS 202
>gi|89257579|gb|ABD65068.1| GTP-binding protein, putative [Brassica oleracea]
Length = 202
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G +
Sbjct: 123 CDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PSTVQIRGQPVNQQ---SGCCS 201
>gi|388500972|gb|AFK38552.1| unknown [Medicago truncatula]
Length = 202
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 131/205 (63%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D SER VS + A A E G F+E SAK NVEQ F +A I + + + +N
Sbjct: 123 CDLTSERAVSYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKD--RMASQPTNN 180
Query: 190 VKRNILKQKPENQSPPIG---GCCS 211
+ ++ + + P+G GCCS
Sbjct: 181 ARPPTVQIRGQ----PVGQKSGCCS 201
>gi|168030217|ref|XP_001767620.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
gi|162681149|gb|EDQ67579.1| Rab1/RabD-family small GTPase [Physcomitrella patens subsp. patens]
Length = 203
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 131/202 (64%), Gaps = 4/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VV A A E G FLE SAK NVEQ F +A +I + S+
Sbjct: 123 SDLASKKVVDYATAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPALSST 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
+ N ++ + + P GGCCS
Sbjct: 183 SRPNNVQLRGQTILPK-GGCCS 203
>gi|409075969|gb|EKM76344.1| hypothetical protein AGABI1DRAFT_115896 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426192906|gb|EKV42841.1| hypothetical protein AGABI2DRAFT_195613 [Agaricus bisporus var.
bisporus H97]
Length = 220
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 133/213 (62%), Gaps = 15/213 (7%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S ++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + V GK++KL+I
Sbjct: 8 SQPMNVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVKGKKIKLSI 67
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGIILVYDV+ RETF L W E++ Y + +K+LV
Sbjct: 68 WDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WYSELETY-VSSSVIKILV 125
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK+D++ R V+ EG A+ GSLF+E SAKT V++ F ++ KI+E P L
Sbjct: 126 GNKLDKEFSRQVTAAEGQQFAERMGSLFIEASAKTSVGVKEVFTEVVEKILETPELWANS 185
Query: 187 SNVVKRNILKQKP--------ENQSPP--IGGC 209
+ N P N +PP GGC
Sbjct: 186 TKHSTSNGNGGMPGGVQVLDLRNDAPPQDAGGC 218
>gi|392574050|gb|EIW67187.1| hypothetical protein TREMEDRAFT_40402 [Tremella mesenterica DSM
1558]
Length = 205
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 128/202 (63%), Gaps = 4/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R+TFTN+ W +E+D Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTFTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV E + A E G FLE SAK NVEQ F ++ +I + S
Sbjct: 124 SDLTTKKVVEHNEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSTSMASGS 183
Query: 190 VKRNILKQKPEN-QSPPIGGCC 210
++ +K + + GGCC
Sbjct: 184 GGKSTIKGLGQTVEQKTAGGCC 205
>gi|391343074|ref|XP_003745839.1| PREDICTED: ras-related protein Rab-10-like [Metaseiulus
occidentalis]
Length = 204
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/211 (45%), Positives = 136/211 (64%), Gaps = 20/211 (9%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELHGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T + +F N++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNQRSFENIAK-WLRYIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-------VPS 181
K D + +RV+S+++G A+A++H FLE SAK N+E+ F QLA I++ V +
Sbjct: 123 KCDMELKRVISKDKGEAIARDHNISFLETSAKANINIEEAFTQLAEAILQKQTSGRAVDA 182
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGG-CCS 211
G NV R + P +G CC
Sbjct: 183 ATSGGINVGPR---------ERPALGANCCH 204
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 123/170 (72%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVVS E+G A+A+EHG F+E SAK N+++ F +LA I++
Sbjct: 123 KSDMEEKRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|255637404|gb|ACU19030.1| unknown [Glycine max]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 124/213 (58%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+ LIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLFLIGDSGVGKSCLLLRFADDSYIESYINTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++ R VS E A A E G F+E SAK NVEQ F +A I
Sbjct: 123 CDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GGCCS
Sbjct: 170 -KDRMASQPANNARPPTVQIRGQPVAQKGGCCS 201
>gi|1370166|emb|CAA98160.1| RAB1C [Lotus japonicus]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/213 (48%), Positives = 125/213 (58%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTENKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPVNNARPPTVQIRGQPVNQKSGCCS 201
>gi|390339812|ref|XP_003725089.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Strongylocentrotus
purpuratus]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 134/202 (66%), Gaps = 7/202 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ LL F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCLLFRFSDDTFSTTFISTIGIDFKIKTVELNGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + + ++ N+D KML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +R+++++ G +AKE+G F+E SAK NVEQ F LA I++ + GS
Sbjct: 123 KCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTGSP 182
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
V + +K+ + S CC
Sbjct: 183 GVVKPDMKEGSSSGSK----CC 200
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + RVVS E+G A+A+EHG F+E SAK N+++ F +LA I++
Sbjct: 123 KSDMEERRVVSTEKGEAIAREHGIRFMETSAKANINIDRAFSELAEAILD 172
>gi|340503618|gb|EGR30169.1| ras oncogene family protein, putative [Ichthyophthirius
multifiliis]
Length = 210
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 133/209 (63%), Gaps = 14/209 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+S VGKSSLL+ F + ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+TSSYY+GA GIILVYD+T R+TF ++ D W E D + N++ VK+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVVKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
+D +++R VS +EG LA G F+E SA T NVE F LA E+ S +++ ++
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTANNVENAFVTLA---TEIKSRVQKTTDN 181
Query: 190 VKRNILKQKPE--------NQSPPIGGCC 210
N Q N+ GGCC
Sbjct: 182 KNNNAAGQGKTKIKAGEDINKKKSQGGCC 210
>gi|401623107|gb|EJS41224.1| sec4p [Saccharomyces arboricola H-6]
Length = 215
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 124/180 (68%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ RVV+ ++G ALAKE G F+E SAK NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMDT-RVVTADQGEALAKELGIPFIESSAKNDNNVNEIFFTLAKLIQE 182
>gi|254583598|ref|XP_002497367.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
gi|238940260|emb|CAR28434.1| ZYRO0F03872p [Zygosaccharomyces rouxii]
Length = 217
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 124/180 (68%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVD---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF+N+ W K V+ ++ N
Sbjct: 66 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIRQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D +LVGNK D D+ R V+ E+G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DDAQLLLVGNKSDMDT-RTVTYEQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|449461253|ref|XP_004148356.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
gi|449505222|ref|XP_004162409.1| PREDICTED: ras-related protein RABD2c-like [Cucumis sativus]
Length = 202
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VVS E A A E G F+E SAK+ NVE+ F +A +I + +
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKSATNVEEAFMAMAAEIKNRMATQPMNNAR 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVNIRGQPVNQK---SGCCS 201
>gi|321457381|gb|EFX68468.1| hypothetical protein DAPPUDRAFT_301441 [Daphnia pulex]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 122/169 (72%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 SYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITSVKTFDNIAK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D + +R VS+E+G +A+EHG F+E SAK N+E F +LA I+
Sbjct: 123 KCDVEDKRAVSKEKGEMIAREHGIRFMETSAKANINIESAFYELAQAIL 171
>gi|357135226|ref|XP_003569212.1| PREDICTED: ras-related protein RIC1-like [Brachypodium distachyon]
Length = 203
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 105/214 (49%), Positives = 127/214 (59%), Gaps = 29/214 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVS E G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEI------------- 169
Query: 190 VKRNILKQKPENQSPPI------------GGCCS 211
K + Q N S P GCCS
Sbjct: 170 -KNRMASQPAANASKPATVQMRGQPVAQQNGCCS 202
>gi|365760935|gb|EHN02617.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 127/180 (70%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++T+
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHATD 124
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ + +LVGNK D D+ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 125 EAQL-LLVGNKSDMDT-RVVTVDQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|297833958|ref|XP_002884861.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
gi|297330701|gb|EFH61120.1| hypothetical protein ARALYDRAFT_478519 [Arabidopsis lyrata subsp.
lyrata]
Length = 205
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F + +D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VVS E G ALA E G FLE SAK NVEQ F +A +I +
Sbjct: 120 GNKNDMVENKVVSTETGKALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNA 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+ ++ K + GGCC
Sbjct: 180 NKTSGPGTVQMKGQPIQQNNGGCC 203
>gi|326493844|dbj|BAJ85384.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 103/203 (50%), Positives = 130/203 (64%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVS E G ALA E G FLE SAK NVE+ F +A +I + G+
Sbjct: 123 CDLAESRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAAEIKNRMASQPAGNAS 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 KPATVQMRGQPVAQQ---NGCCS 202
>gi|112005093|gb|ABH85387.1| putative GTP binding protein [Beta vulgaris]
Length = 202
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y+++ + VK+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQQSFDNVKQ-WLNEIDRYASD-NVVKILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S +VVS E A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTSNKVVSSETAKAFADEIGIPFLETSAKNSTNVEQAFMTMAAEI 169
>gi|302764578|ref|XP_002965710.1| rab family GTPase [Selaginella moellendorffii]
gi|302779692|ref|XP_002971621.1| rab family GTPase [Selaginella moellendorffii]
gi|300160753|gb|EFJ27370.1| rab family GTPase [Selaginella moellendorffii]
gi|300166524|gb|EFJ33130.1| rab family GTPase [Selaginella moellendorffii]
Length = 210
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 21/216 (9%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDNKPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NSNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D R VS EEG AKEHG +F+E SAKT +NVE+ F A KI + +EEG
Sbjct: 118 GNKADLAHRRAVSTEEGEQFAKEHGLIFMETSAKTAQNVEEAFINTASKIHQK---IEEG 174
Query: 187 -------SNVVKRNILKQKP----ENQSPPIGGCCS 211
++ +K +L P ++ P GGCCS
Sbjct: 175 VFDVSNEASGIKIGVLPNHPGHRGDSSGPQSGGCCS 210
>gi|1616614|emb|CAA69701.1| small GTP-binding protein [Nicotiana plumbaginifolia]
Length = 203
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 7/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASDS-VNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VVS E A A E G F+E SAK NVEQ F +A I + +N
Sbjct: 123 CDLTAQKVVSTETAQAFADEIGIPFMETSAKNATNVEQAFMAMAASIKNRMASQPASNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
+ ++ +P NQ GCC
Sbjct: 183 RPPTVQIRGQPVNQK---SGCC 201
>gi|89257443|gb|ABD64935.1| GTP-binding protein, putative [Brassica oleracea]
Length = 203
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 126/202 (62%), Gaps = 5/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G
Sbjct: 123 NDLTSQKVVSTETAQAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPSGGAK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVQIRGQPVNQQQ--SGCCS 202
>gi|341885115|gb|EGT41050.1| hypothetical protein CAEBREN_19821 [Caenorhabditis brenneri]
gi|341885137|gb|EGT41072.1| hypothetical protein CAEBREN_20077 [Caenorhabditis brenneri]
Length = 201
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/202 (46%), Positives = 133/202 (65%), Gaps = 8/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD+ FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D VKM++GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D RVVSRE G +A++HG F E SAK +V+ F LA I+ ++P EE S
Sbjct: 124 CDMSDRRVVSRERGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDSTEEQS- 182
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
R+ + ++ GGCC
Sbjct: 183 ---RDTVNPVQPQRTGGSGGCC 201
>gi|413938044|gb|AFW72595.1| hypothetical protein ZEAMMB73_730860, partial [Zea mays]
Length = 207
Score = 177 bits (449), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 9 FDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 68
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 69 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 126
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV+ E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 127 SDLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANA 186
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 187 RPATVQIRGQPVNQKT---SCCS 206
>gi|15229836|ref|NP_187779.1| Ras-related protein RABD1 [Arabidopsis thaliana]
gi|75338904|sp|Q9ZRE2.1|RABD1_ARATH RecName: Full=Ras-related protein RABD1; Short=AtRABD1; AltName:
Full=Ras-related protein ATFP8
gi|6671929|gb|AAF23189.1|AC016795_2 putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|4097557|gb|AAD00111.1| ATFP8 [Arabidopsis thaliana]
gi|26451349|dbj|BAC42775.1| putative GTP-binding protein ATFP8 [Arabidopsis thaliana]
gi|28973343|gb|AAO63996.1| putative GTP-binding protein (ATFP8) [Arabidopsis thaliana]
gi|332641569|gb|AEE75090.1| Ras-related protein RABD1 [Arabidopsis thaliana]
Length = 205
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F + +D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VVS E G ALA E G FLE SAK NVEQ F +A +I +
Sbjct: 120 GNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNA 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+ ++ K + GGCC
Sbjct: 180 NKTSGPGTVQMKGQPIQQNNGGCC 203
>gi|4096662|gb|AAD10389.1| Rab1-like small GTP-binding protein [Petunia x hybrida]
Length = 202
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 98/170 (57%), Positives = 116/170 (68%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ N+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLSEIDRYA-NESVCKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV + G ALA E G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKCDLVENKVVDTQTGKALADELGIPFLETSAKDSINVEQAFLTMAGEI 169
>gi|449431876|ref|XP_004133726.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 201
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/209 (50%), Positives = 128/209 (61%), Gaps = 14/209 (6%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSL 182
GNK D +VV + A A E G FLE SAK NVEQ F +A +I + P+
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTS 179
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCCS 211
+ NV +K +P Q CCS
Sbjct: 180 SKSSGNVQ----MKGQPIQQK---SSCCS 201
>gi|350538375|ref|NP_001233828.1| small GTP-binding protein [Solanum lycopersicum]
gi|1053065|gb|AAA80679.1| small GTP-binding protein [Solanum lycopersicum]
Length = 202
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/205 (51%), Positives = 127/205 (61%), Gaps = 7/205 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ N+ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYA-NESVCKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VV + G ALA E G FLE SAK NVEQ F +A +I + G
Sbjct: 120 GNKCDLVENKVVDTQMGKALADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPAG 179
Query: 187 SNVVKRNI-LKQKPENQSPPIGGCC 210
+ + +K +P Q G CC
Sbjct: 180 AKRTGSTVQIKGQPIEQK---GNCC 201
>gi|218191283|gb|EEC73710.1| hypothetical protein OsI_08312 [Oryza sativa Indica Group]
Length = 206
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 128/202 (63%), Gaps = 7/202 (3%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D + +VVS E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 127 DLTANKVVSSETAKAFADEMGIPFMETSAKNATNVEQAFMAMAASIKDRMASQPAAANAR 186
Query: 191 KRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 187 PPTVQIRGQPVNQKT---SCCS 205
>gi|225465202|ref|XP_002264623.1| PREDICTED: ras-related protein RABD1 [Vitis vinifera]
gi|297739505|emb|CBI29687.3| unnamed protein product [Vitis vinifera]
Length = 202
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 105/208 (50%), Positives = 128/208 (61%), Gaps = 13/208 (6%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNDYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA----LKIMEVPSL 182
GNK D +VV E A A E G FLE SAK NVEQ F +A K+ P+
Sbjct: 120 GNKCDLVENKVVDTETAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMGNQPNA 179
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCC 210
S+ V+ +K +P Q+ CC
Sbjct: 180 TARSSSTVQ---MKGQPIQQNS---NCC 201
>gi|15236555|ref|NP_193486.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
gi|297800342|ref|XP_002868055.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|75204021|sp|Q9SEH3.1|RAD2C_ARATH RecName: Full=Ras-related protein RABD2c; Short=AtRABD2c; AltName:
Full=Ras-related protein Rab1C; Short=AtRab1C
gi|6651023|gb|AAF22133.1|AF127134_1 ras-related small GTP-binding protein [Arabidopsis thaliana]
gi|7268505|emb|CAB78756.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|15529161|gb|AAK97675.1| AT4g17530/dl4800c [Arabidopsis thaliana]
gi|110742819|dbj|BAE99310.1| ras-related small GTP-binding protein RAB1c [Arabidopsis thaliana]
gi|297313891|gb|EFH44314.1| hypothetical protein ARALYDRAFT_914960 [Arabidopsis lyrata subsp.
lyrata]
gi|332658507|gb|AEE83907.1| RAB GTPase homolog 1C [Arabidopsis thaliana]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G +
Sbjct: 123 CDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVQIRGQPVNQQ---SGCCS 201
>gi|346472349|gb|AEO36019.1| hypothetical protein [Amblyomma maculatum]
Length = 200
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 23/210 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +R++SRE G A+A +H F+E SAKT N+E+ F +LA I+
Sbjct: 123 KCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILN---------- 172
Query: 189 VVKRNILKQKPENQS-----PP---IGGCC 210
K+ K + ENQ PP + CC
Sbjct: 173 --KQMAGKDQAENQDRLKVLPPEKKVMNCC 200
>gi|340509040|gb|EGR34616.1| hypothetical protein IMG5_005710 [Ichthyophthirius multifiliis]
Length = 210
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 133/206 (64%), Gaps = 8/206 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+S VGKSSLL+ F + ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSSVGKSSLLLRFSDNIFNECFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+TSSYY+GA GIILVYD+T R+TF ++ D W E D + N++ +K+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDRQTFKDI-DNWLAEAD-KNANENVIKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM---EVPSLLEEG 186
+D +++R VS +EG LA G F+E SA T NVE F LA +I+ + S +G
Sbjct: 125 IDLENKRQVSFDEGKELADSLGIKFIETSALTASNVENAFVTLATEIISRVQKSSDNNKG 184
Query: 187 SNVV--KRNILKQKPENQSPPIGGCC 210
N K I + N GGCC
Sbjct: 185 GNQASGKTRIRAGEDINNIKKQGGCC 210
>gi|118490011|gb|ABK96799.1| ras-related GTP binding protein [Solanum tuberosum]
Length = 203
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 104/204 (50%), Positives = 130/204 (63%), Gaps = 9/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLRIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + RVVS E A A E G FLE SAK NVEQ F + I + + SN
Sbjct: 123 ADLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTGAIKNRMA-SQPASNS 181
Query: 190 VKRNI--LKQKPENQSPPIGGCCS 211
K ++ +P QS GGCCS
Sbjct: 182 AKPPTVNIRGQPVTQS---GGCCS 202
>gi|442756017|gb|JAA70168.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 200
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/169 (52%), Positives = 122/169 (72%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNSKSFDNIAK-WLRYIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D + +R+VSRE G A+A +HG F+E SAKT N+E F +LA I+
Sbjct: 123 KCDMEDKRLVSRERGNAVAIDHGIRFMETSAKTNVNIEFAFTELAEAIL 171
>gi|87295018|gb|ABD36921.1| Rab1 [Pinus pinaster]
Length = 202
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 131/206 (63%), Gaps = 7/206 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGKS LL+ F S V TIGVDFKI+ + + GK +KL I
Sbjct: 2 TTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYVGSYISTIGVDFKIRTIELDGKAIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y+++ + K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDMDSFNNVKQ-WLSEIDKYASD-NVSKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D ++ V ++ + A E G FLE SAK NVEQ F +A ++ + S L E
Sbjct: 120 GNKCDLTEKQAVDQQMAKSFADELGIPFLETSAKDASNVEQAFLTMAGEVKRRMASQLTE 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
G+ +K +P Q GGCCS
Sbjct: 180 GNRKANTVEMKGQPLQQK---GGCCS 202
>gi|427787177|gb|JAA59040.1| Putative rab-protein 10 [Rhipicephalus pulchellus]
Length = 200
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 134/210 (63%), Gaps = 23/210 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFHTTFISTIGIDFKIKTIELKGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNTKSFDNIAK-WLRYIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +R++SRE G A+A +H F+E SAKT N+E+ F +LA I+
Sbjct: 123 KCDMEDKRLISRERGEAVAIDHNIRFMETSAKTNVNIERAFTELAEAILN---------- 172
Query: 189 VVKRNILKQKPENQS-----PP---IGGCC 210
K+ K + ENQ PP + CC
Sbjct: 173 --KQMAGKDQAENQDRLRVLPPEKKVMNCC 200
>gi|66811592|ref|XP_639975.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74854016|sp|Q54NU2.1|RAB1D_DICDI RecName: Full=Ras-related protein Rab-1D
gi|60466912|gb|EAL64956.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 204
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FKILLIGDSGVGKS LL+ F S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYD T +++FTN+ W E+D Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +E+VV + + A+ +G F+E SAK NVE+CF +A I
Sbjct: 125 TDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>gi|359318893|ref|XP_848769.2| PREDICTED: ras-related protein Rab-18 isoform 2 [Canis lupus
familiaris]
Length = 236
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 126/202 (62%), Gaps = 33/202 (16%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIW----- 67
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IW
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWFLFWG 67
Query: 68 -------------------------DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFT 102
TAGQERFRTLT SYYRGA G+ILVYDVTRR+TF
Sbjct: 68 CKLLIYSTYSSSYYSSLYFGQEKKVGTAGQERFRTLTPSYYRGAPGVILVYDVTRRDTFV 127
Query: 103 NLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTR 162
L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A++H LF+E SAKT
Sbjct: 128 KL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTC 185
Query: 163 ENVEQCFEQLALKIMEVPSLLE 184
+ V+ FE+L KI++ P L E
Sbjct: 186 DGVQCAFEELVEKIIQTPGLWE 207
>gi|50287271|ref|XP_446065.1| hypothetical protein [Candida glabrata CBS 138]
gi|51701907|sp|O42819.1|SEC4_CANGA RecName: Full=Ras-related protein SEC4
gi|2959746|emb|CAA12071.1| putative SEC4 protein [Candida glabrata]
gi|49525372|emb|CAG58989.1| unnamed protein product [Candida glabrata]
Length = 215
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 123/179 (68%), Gaps = 10/179 (5%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + G
Sbjct: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W K V+ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQ-WFKTVNEHA-ND 124
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ RVV+ E+G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 125 EAQLLLVGNKSDMDT-RVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQE 182
>gi|388502282|gb|AFK39207.1| unknown [Lotus japonicus]
Length = 209
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 169
>gi|156555777|ref|XP_001602999.1| PREDICTED: ras-related protein Rab-18-B-like [Nasonia vitripennis]
Length = 223
Score = 176 bits (447), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 88/171 (51%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
KIL+IG++ VGKSS+L+ F D++ T+G+D+K K +T+ G +KL IWDTAGQE
Sbjct: 10 LKILMIGETNVGKSSILLRFTEDEFHDNIQNTVGMDYKSKKVTIDGNTVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT +YYR QG ILVYDVT R TFT L D+W E+ Y D VKM+VGNK+D
Sbjct: 70 RFRTLTPNYYRDGQGAILVYDVTDRSTFTKL-DMWLNELHTYCNKTDIVKMVVGNKIDL- 127
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+R V+ EEG+ A+ H +L++E SAKT + V+ CFE+L KI++ P L +
Sbjct: 128 PDRQVTTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWD 178
>gi|405964668|gb|EKC30125.1| Ras-related protein Rab-8A [Crassostrea gigas]
Length = 207
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 134/206 (65%), Gaps = 4/206 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ QD KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIRN-WIRNIEEHAS-QDVDKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + +RVVS+E+G ALA EHG F+E SAK NVE F LA I E
Sbjct: 120 GNKCDMNDKRVVSKEKGEALAIEHGIKFMETSAKASINVEDAFFTLARDIKAKMDRKLES 179
Query: 187 SNVVKRNILKQKP-ENQSPPIGGCCS 211
SN +N P + Q+ G C+
Sbjct: 180 SNAQAKNAGGITPGKTQAKKSGWRCT 205
>gi|321256350|ref|XP_003193368.1| ras-related protein ypt1 [Cryptococcus gattii WM276]
gi|317459838|gb|ADV21581.1| ras-related protein ypt1, putative [Cryptococcus gattii WM276]
gi|405119560|gb|AFR94332.1| GTP-binding protein ypt1 [Cryptococcus neoformans var. grubii H99]
Length = 205
Score = 176 bits (447), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R+T+TN+ W +E+D Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV E A A E G FLE SAK NVEQ F ++ +I + S
Sbjct: 124 SDLATKKVVEYAEAKAFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGP 183
Query: 190 VKRNILKQKPEN-QSPPIGGCC 210
++ +K +N + GGCC
Sbjct: 184 GAKSTIKGLGQNVEQKTAGGCC 205
>gi|403358406|gb|EJY78849.1| RAS small GTpases RIC1/ypt1, putative [Oxytricha trifallax]
Length = 208
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 8/206 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+SGVGKSSLL+ F D+ PTIGVDFKI+ + V GK +KL IWDT
Sbjct: 5 YDYLFKVLLIGNSGVGKSSLLLRFADDVFTDNFMPTIGVDFKIRTIEVDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+TSSYY+GA GII+ YD+T RE+F+ + + W EV+ ++++ + ++LVGNK
Sbjct: 65 AGQERFKTITSSYYKGAHGIIVTYDITDRESFSAIEN-WMNEVEKHASD-NISRILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-----MEVPSLLE 184
D + R VS +EG LA+ + FLE SAK +NVE+ F + +I + P
Sbjct: 123 SDMEDARQVSTDEGKELAEHYNVRFLETSAKDCKNVEEAFTMMTREIKSRVAITQPKKAT 182
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
E + + N + + + GGCC
Sbjct: 183 EQTQAQRINKNQHQTKKIQEKKGGCC 208
>gi|226470408|emb|CAX70484.1| Rab-protein 10 [Schistosoma japonicum]
Length = 205
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYD FK+LLIGDSGVGK+ LL+ ++ S TIG+DFKIK + + GK++KL IWD
Sbjct: 5 SYDALFKLLLIGDSGVGKTCLLIRYVDGSYSPSFISTIGIDFKIKTIELEGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA G +++YD+T R TF N+ W K + Y++ +D K++VGN
Sbjct: 65 TAGQERFHTITTSYYRGAMGRMMIYDITNRRTFDNIQ-TWMKNICDYAS-EDVEKLVVGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGS 187
K D D+ R VS EEG A+ H FLE SA T ENV + FE+L L I+ + P+ E S
Sbjct: 123 KCDFDNRRAVSYEEGSEKARLHRIKFLETSAMTGENVNKAFEELTLAILRKTPTRGHEPS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
V + + L ++S CC
Sbjct: 183 TVTQSHRLVDPLNSKSE---SCC 202
>gi|187609396|pdb|3CPH|A Chain A, Crystal Structure Of Sec4 In Complex With Rab-Gdi
Length = 213
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|442759119|gb|JAA71718.1| Putative gtp-binding protein [Ixodes ricinus]
Length = 207
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+S+L F + D TIG+DFKI+++ + GK++KL I
Sbjct: 2 AKSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT+ TF N+ W + D ++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTKENTFENIK-TWIRNTDEHAA-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D + R VSRE G LA EHG F+E SA + NVE F LA I E
Sbjct: 120 GNKCDMNDLRQVSRERGEKLAVEHGIKFMETSAVSSINVEDAFYTLARDIKE 171
>gi|224001286|ref|XP_002290315.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
gi|220973737|gb|EED92067.1| ypt1-like rab-type small G protein [Thalassiosira pseudonana
CCMP1335]
Length = 201
Score = 176 bits (445), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKSSLL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D + +RVVS E+G A G FLE SAKT NVEQ F +A +I
Sbjct: 123 CDLEGKRVVSTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQI 169
>gi|303734|dbj|BAA02118.1| GTP-binding protein [Pisum sativum]
gi|452359|emb|CAA82707.1| guanine nucleotide regulatory protein [Vicia faba]
gi|738942|prf||2001457K GTP-binding protein
gi|1098293|prf||2115367A small GTP-binding protein
Length = 202
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 128/205 (62%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V E A A E G F+E SAK NVEQ F +A I E + + +N
Sbjct: 123 CDLTENRAVPYETAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSIKE--RMASQPTNN 180
Query: 190 VKRNILKQKPENQSPPIG---GCCS 211
+ ++ + + P+G GCCS
Sbjct: 181 ARPPTVQIRGQ----PVGQKSGCCS 201
>gi|123444682|ref|XP_001311109.1| Ras-like GTP-binding protein YPT1 [Trichomonas vaginalis G3]
gi|62736240|gb|AAX97449.1| small Rab GTPase Rab1b [Trichomonas vaginalis]
gi|121892906|gb|EAX98179.1| Ras-like GTP-binding protein YPT1, putative [Trichomonas vaginalis
G3]
Length = 203
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 129/201 (64%), Gaps = 5/201 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+DL FK+LLIGDSG GKS LL+ F + D+ TIGVDFKIK + V GK +K+ +WDT
Sbjct: 6 FDLLFKVLLIGDSGTGKSCLLIRFAENIFSDNYISTIGVDFKIKTINVDGKTIKMQVWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T+SYYRG+ GIILVYDVT R++F ++ + W KE+D + D +++VGNK
Sbjct: 66 AGQERFRTITASYYRGSNGIILVYDVTNRDSFDHI-NYWMKEIDRLAA-PDVCRLIVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +RVV+ EEG +LA+++G FLE SA NVE+ F +A + + G N
Sbjct: 124 SDLSDKRVVTTEEGQSLAQQYGVSFLETSALGNANVEEMFTAMAKAMRKKQGATSGGEN- 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
N + KP + GC
Sbjct: 183 -GGNAVPLKPAKKVEGESGCA 202
>gi|323305102|gb|EGA58852.1| Sec4p [Saccharomyces cerevisiae FostersB]
gi|323348772|gb|EGA83012.1| Sec4p [Saccharomyces cerevisiae Lalvin QA23]
gi|365765838|gb|EHN07343.1| Sec4p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 215
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|311907|emb|CAA51011.1| ras-related GTP-binding protein [Nicotiana tabacum]
Length = 203
Score = 176 bits (445), Expect = 7e-42, Method: Compositional matrix adjust.
Identities = 104/215 (48%), Positives = 127/215 (59%), Gaps = 31/215 (14%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLSEIDRYASD-GVNKILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + RVVS E A A E G FLE SAK NVEQ F + I
Sbjct: 123 SDLTANRVVSYETAKAFADEIGIPFLETSAKDATNVEQAFMAMTSAI------------- 169
Query: 190 VKRNILKQKPENQS--PPI-----------GGCCS 211
+N + +P N S PP GGCCS
Sbjct: 170 --KNRMASQPANNSAKPPTVNIRGQPVTQSGGCCS 202
>gi|29841143|gb|AAP06156.1| SJCHGC02833 protein [Schistosoma japonicum]
gi|226468172|emb|CAX76313.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468174|emb|CAX76314.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468176|emb|CAX76315.1| Rab-protein 8 [Schistosoma japonicum]
gi|226468178|emb|CAX76316.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472646|emb|CAX71009.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472648|emb|CAX71010.1| Rab-protein 8 [Schistosoma japonicum]
gi|226472650|emb|CAX71011.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/201 (49%), Positives = 128/201 (63%), Gaps = 8/201 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +E++ Y+ N ++LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V + + AKEH FLE SAK NVE F ++A +I + ++ S+
Sbjct: 123 CDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSSN 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
V N +P +S GGCC
Sbjct: 183 VTVN--STQPVTKS---GGCC 198
>gi|18422766|ref|NP_568678.1| RAB GTPase-1A [Arabidopsis thaliana]
gi|297794499|ref|XP_002865134.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|75172011|sp|Q9FPJ4.1|RAD2B_ARATH RecName: Full=Ras-related protein RABD2b; Short=AtRABD2b; AltName:
Full=Ras-related protein Rab1A; Short=AtRab1A
gi|11762128|gb|AAG40342.1|AF324990_1 AT5g47200 [Arabidopsis thaliana]
gi|19347885|gb|AAL85999.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21281060|gb|AAM45061.1| putative ras-related small GTP-binding protein [Arabidopsis
thaliana]
gi|21553520|gb|AAM62613.1| ras-related small GTP-binding protein-like protein [Arabidopsis
thaliana]
gi|71143080|gb|AAZ23931.1| At5g47200 [Arabidopsis thaliana]
gi|107738243|gb|ABF83667.1| At5g47200 [Arabidopsis thaliana]
gi|110742473|dbj|BAE99155.1| ras-related small GTP-binding protein-like [Arabidopsis thaliana]
gi|297310969|gb|EFH41393.1| hypothetical protein ARALYDRAFT_494258 [Arabidopsis lyrata subsp.
lyrata]
gi|332008100|gb|AED95483.1| RAB GTPase-1A [Arabidopsis thaliana]
Length = 202
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G
Sbjct: 123 NDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVQIRGQPVNQQ---SGCCS 201
>gi|190406568|gb|EDV09835.1| GTP-binding protein SAS1 [Saccharomyces cerevisiae RM11-1a]
gi|207345675|gb|EDZ72422.1| YFL005Wp-like protein [Saccharomyces cerevisiae AWRI1631]
gi|259146187|emb|CAY79446.1| Sec4p [Saccharomyces cerevisiae EC1118]
gi|323355176|gb|EGA87003.1| Sec4p [Saccharomyces cerevisiae VL3]
Length = 215
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|449530083|ref|XP_004172026.1| PREDICTED: ras-related protein RABD1-like isoform 2 [Cucumis
sativus]
Length = 187
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 169
>gi|14318517|ref|NP_116650.1| Sec4p [Saccharomyces cerevisiae S288c]
gi|134394|sp|P07560.1|SEC4_YEAST RecName: Full=Ras-related protein SEC4; AltName: Full=Suppressor of
RHO3 protein 6
gi|172566|gb|AAA35032.1| ras-like protein [Saccharomyces cerevisiae]
gi|836749|dbj|BAA09233.1| Ras-related protein [Saccharomyces cerevisiae]
gi|51013137|gb|AAT92862.1| YFL005W [Saccharomyces cerevisiae]
gi|151940757|gb|EDN59144.1| small GTP binding protein [Saccharomyces cerevisiae YJM789]
gi|256268867|gb|EEU04218.1| Sec4p [Saccharomyces cerevisiae JAY291]
gi|285811889|tpg|DAA12434.1| TPA: Sec4p [Saccharomyces cerevisiae S288c]
gi|349577911|dbj|GAA23078.1| K7_Sec4p [Saccharomyces cerevisiae Kyokai no. 7]
gi|392299666|gb|EIW10759.1| Sec4p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 215
Score = 176 bits (445), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>gi|348538098|ref|XP_003456529.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 202
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK+ NVEQ F +A +I +
Sbjct: 123 CDLTTKKVVDYTTAKEFADNLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATAGAA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ KP N S GGCC
Sbjct: 183 EKSNVKIQSKPVNTSS--GGCC 202
>gi|268567998|ref|XP_002640132.1| C. briggsae CBR-RAB-10 protein [Caenorhabditis briggsae]
Length = 201
Score = 175 bits (444), Expect = 8e-42, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 8/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD+ FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDMLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D VKM++GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVVKMILGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D RVVS++ G +A++HG F E SAK +V+ F LA I+ ++P +E S
Sbjct: 124 CDMSDRRVVSKDRGEKIAQDHGIRFHETSAKLNVHVDTAFYDLAEAILAKMPDSTDEQSR 183
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+ Q+P GGCC
Sbjct: 184 DTINPVQPQRPGGS----GGCC 201
>gi|217073632|gb|ACJ85176.1| unknown [Medicago truncatula]
Length = 207
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/196 (50%), Positives = 119/196 (60%), Gaps = 17/196 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D SER S + A A E G F+E SAK NVEQ F +A I
Sbjct: 123 CDLTSERAASYDTAKAFADEIGIPFMETSAKDSTNVEQAFMAMASSI------------- 169
Query: 190 VKRNILKQKPENQSPP 205
K + Q N PP
Sbjct: 170 -KDRMASQPTNNAKPP 184
>gi|117939063|dbj|BAF36685.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 190
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 96/195 (49%), Positives = 127/195 (65%), Gaps = 6/195 (3%)
Query: 17 ILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDTAGQERF 75
+LLIGDSGVGKS LL+ F + TIGVDFKI+ + + GK +KL IWDTAGQ+RF
Sbjct: 1 LLLIGDSGVGKSCLLLRFADDTYSGTYIATIGVDFKIRTIQIGGKVIKLQIWDTAGQDRF 60
Query: 76 RTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSE 135
RT+TSSYYRGA GII+VYDVT R++F N+ +W KE++ Y+T C ++LVGNK D ++
Sbjct: 61 RTITSSYYRGANGIIIVYDVTNRDSFNNVQ-MWVKEIESYATEGVC-RLLVGNKCDLVNK 118
Query: 136 RVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNIL 195
+VV G LA G FLE SAK NVEQ F+ +A +IM+ + +G K +L
Sbjct: 119 KVVDYNTGKQLADSFGISFLETSAKNATNVEQAFQTMATEIMKHTAPRNDGPIGTKVEVL 178
Query: 196 KQKPENQSPPIGGCC 210
P ++ GGCC
Sbjct: 179 ---PPSEVKSEGGCC 190
>gi|145535548|ref|XP_001453507.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833747|emb|CAI39343.1| rab_B22 [Paramecium tetraurelia]
gi|124421229|emb|CAK86110.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 136/204 (66%), Gaps = 9/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKILLIG+S VGKSSLL+ F + ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+T+SYY+GA GIILVYDVT +++F ++ + W EV+ Y+ N++ V++LVGNK
Sbjct: 67 AGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
VD +S+R V+ EEG LA F+E SAK NVE+ F LA E+ + + +GS
Sbjct: 125 VDLESKREVTFEEGKELADSLNIRFIETSAKNSSNVEKAFITLA---NEIKAKVAKGSEA 181
Query: 190 VK-RNILKQKPENQSPPIG--GCC 210
V + + P+ Q + GCC
Sbjct: 182 VPIKTGPRITPDQQQNTVKDTGCC 205
>gi|297842904|ref|XP_002889333.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297335175|gb|EFH65592.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 101/203 (49%), Positives = 127/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V E A A E G F+E SAK NVEQ F ++ I E + G+N
Sbjct: 123 SDLTENRDVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 RPPTVQIRGQPMAQK---NGCCS 202
>gi|15217622|ref|NP_171715.1| Ras-related protein RABD2A [Arabidopsis thaliana]
gi|205371858|sp|P28188.3|RAD2A_ARATH RecName: Full=Ras-related protein RABD2a; Short=AtRABD2a; AltName:
Full=Ras-related protein Ara-5; AltName:
Full=Ras-related protein Rab1B; Short=AtRab1B
gi|15450465|gb|AAK96526.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|16974457|gb|AAL31232.1| At1g02130/T7I23_6 [Arabidopsis thaliana]
gi|332189266|gb|AEE27387.1| Ras-related protein RABD2A [Arabidopsis thaliana]
Length = 203
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 126/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R + E A A E G F+E SAK NVEQ F ++ I E + G+N
Sbjct: 123 SDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 RPPTVQIRGQPVAQK---NGCCS 202
>gi|392567328|gb|EIW60503.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 204
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 126/205 (61%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D S++VV A + G FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTSKKVVEYSVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTTT 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
+ K + + Q GGCC
Sbjct: 180 AAGTGKSSTITPGQTVQQQAAGGCC 204
>gi|158294114|ref|XP_556035.3| AGAP005393-PA [Anopheles gambiae str. PEST]
gi|157015414|gb|EAL39812.3| AGAP005393-PA [Anopheles gambiae str. PEST]
Length = 213
Score = 175 bits (444), Expect = 9e-42, Method: Compositional matrix adjust.
Identities = 102/222 (45%), Positives = 138/222 (62%), Gaps = 31/222 (13%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSPPIG-----------GCC 210
+N +K + Q+ SP +G GCC
Sbjct: 175 VFDINNEANGIK---IGQQHSPTSPSLGSGNSPGGPASSGCC 213
>gi|192910784|gb|ACF06500.1| Ras-related protein RIC1 [Elaeis guineensis]
Length = 202
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D + RVVS E G A A E G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAANRVVSYETGKAFADEIGIPFLETSAKDATNVEKAFMTMAAEI 169
>gi|116791141|gb|ABK25871.1| unknown [Picea sitchensis]
Length = 203
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 103/209 (49%), Positives = 132/209 (63%), Gaps = 12/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL I
Sbjct: 2 TTEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKMIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E++ Y++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEINRYAS-ENVNKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSL 182
GNK D + RVVS + G A G FLE SAK NVE+ F +A +I + P+L
Sbjct: 120 GNKCDLTTRRVVSYQTGKDFADSLGIPFLETSAKNATNVEEAFMTMASEIKKRMASQPAL 179
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCCS 211
S V N+ +P PP GCCS
Sbjct: 180 NTGKSGTV--NVGGSQP---IPPKTGCCS 203
>gi|367011395|ref|XP_003680198.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
gi|359747857|emb|CCE90987.1| hypothetical protein TDEL_0C00980 [Torulaspora delbrueckii]
Length = 215
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/180 (55%), Positives = 122/180 (67%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGTGKSYDSIMKILLIGDSGVGKSCLLVRFVD---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK+ KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKTKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIRQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D +LVGNK D D+ R V+ E+G LAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DDAQLLLVGNKSDMDT-RTVTYEQGETLAKELGIPFVESSAKNDDNVNEIFFTLARLIQE 182
>gi|338721465|ref|XP_001494344.3| PREDICTED: ras-related protein Rab-18-like [Equus caballus]
Length = 248
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 88/156 (56%), Positives = 113/156 (72%), Gaps = 3/156 (1%)
Query: 30 LLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQG 88
LL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQERFRTLT SYYRGAQG
Sbjct: 66 LLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQG 125
Query: 89 IILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAK 148
+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+++ R V R EG+ A+
Sbjct: 126 VILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKEN-REVDRNEGLKFAR 183
Query: 149 EHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 184 KHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 219
>gi|355783089|gb|EHH65010.1| hypothetical protein EGM_18349 [Macaca fascicularis]
Length = 205
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G LFLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGILFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|392579393|gb|EIW72520.1| hypothetical protein TREMEDRAFT_26769 [Tremella mesenterica DSM
1558]
Length = 187
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 119/171 (69%), Gaps = 5/171 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+S KILL+G+S VGKSSLL+ F +D TIGVDFK+ L V K+ KL IWDT
Sbjct: 13 ISIKILLVGNSSVGKSSLLLRFTEDDFLADEDTIATIGVDFKVTRLEVDEKKYKLAIWDT 72
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRTLT+SYYRGAQG++LVYD+T R+TF L W +E+D Y + VK+++GNK
Sbjct: 73 AGQERFRTLTASYYRGAQGVVLVYDMTSRKTFDELLR-WDRELDTYCGDS-IVKLILGNK 130
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
D+ R V+ EEG A A+ G+LF+ECSAKT E +E+ F +L K+ +P
Sbjct: 131 ADKSLARQVTTEEGKAFAESLGALFMECSAKTNEGIEEAFRELVRKVSGIP 181
>gi|346467655|gb|AEO33672.1| hypothetical protein [Amblyomma maculatum]
Length = 235
Score = 175 bits (444), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 119
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 177
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D + +VVS E G A A E G F+E AK NVEQ F +A I
Sbjct: 178 SDLTANKVVSYETGKAFADEIGIPFMETGAKNATNVEQAFMAMAADI 224
>gi|115437604|ref|NP_001043336.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|109940139|sp|P40392.2|RIC1_ORYSJ RecName: Full=Ras-related protein RIC1
gi|57899331|dbj|BAD87942.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|57900421|dbj|BAD87657.1| Ras-related protein RIC1 [Oryza sativa Japonica Group]
gi|113532867|dbj|BAF05250.1| Os01g0558600 [Oryza sativa Japonica Group]
gi|125526416|gb|EAY74530.1| hypothetical protein OsI_02420 [Oryza sativa Indica Group]
gi|125570818|gb|EAZ12333.1| hypothetical protein OsJ_02222 [Oryza sativa Japonica Group]
gi|215769435|dbj|BAH01664.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D RVVS E G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>gi|242057717|ref|XP_002458004.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
gi|241929979|gb|EES03124.1| hypothetical protein SORBIDRAFT_03g025350 [Sorghum bicolor]
Length = 203
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D RVVS E G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>gi|156555012|ref|XP_001603108.1| PREDICTED: ras-related protein Rab-2-like [Nasonia vitripennis]
Length = 214
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D D+ R V REEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLDARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +AKEHG F E SAK N+E+ F LA I++ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|410076036|ref|XP_003955600.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
gi|372462183|emb|CCF56465.1| hypothetical protein KAFR_0B01660 [Kazachstania africana CBS 2517]
Length = 206
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/178 (55%), Positives = 123/178 (69%), Gaps = 10/178 (5%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGK 60
SG +YD KILLIGDSGVGKS LLV F+ D SP TIG+DFKIK + + GK
Sbjct: 2 SGNGKNYDSIMKILLIGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKTVDINGK 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N D
Sbjct: 59 KVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNDHA-NDD 116
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+LVGNK D D+ R+V+ E+G ALAKE G F+E SAK +NV + F LA I +
Sbjct: 117 AQLLLVGNKSDMDT-RLVTYEQGEALAKELGLPFVESSAKDDQNVNEIFFTLARLIQD 173
>gi|413923309|gb|AFW63241.1| hypothetical protein ZEAMMB73_436511 [Zea mays]
Length = 272
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 128/202 (63%), Gaps = 7/202 (3%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 75 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 134
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 135 GQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNKS 192
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D + +VV+ E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 193 DLTANKVVATETAKAFADEMGIPFMETSAKNAINVEQAFMAMAASIKDRMASQPAAANAR 252
Query: 191 KRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 253 PATVQIRGQPVNQKT---SCCS 271
>gi|449267460|gb|EMC78403.1| Ras-related protein Rab-18-B, partial [Columba livia]
Length = 187
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 87/164 (53%), Positives = 115/164 (70%), Gaps = 3/164 (1%)
Query: 25 VGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYY 83
V SLL+ F + L PTIG+DFK+K + V G ++L IWDTAGQERFRTLT SYY
Sbjct: 1 VSSRSLLLRFTGGGFEPKLKPTIGIDFKVKKMVVDGHAVQLAIWDTAGQERFRTLTPSYY 60
Query: 84 RGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEG 143
RGAQG++LVYDVTR+ETFT L W E+D Y + VKMLVGNK D+ +R V R+EG
Sbjct: 61 RGAQGVVLVYDVTRKETFTGLEG-WLNELDTYIAKNNTVKMLVGNKTDK-PDREVERKEG 118
Query: 144 IALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
+ A++H LF+E SAKT++ V+ FE+LA KI+E P + ++ +
Sbjct: 119 LQFARKHSLLFIETSAKTQDGVQCAFEELAAKILETPGVCKKNA 162
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +AKEHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|2317906|gb|AAC24370.1| ARA-5 [Arabidopsis thaliana]
Length = 258
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 126/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 119
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 120 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 177
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R + E A A E G F+E SAK NVEQ F ++ I E + G+N
Sbjct: 178 SDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 237
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 238 RPPTVQIRGQPVAQK---NGCCS 257
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 130/207 (62%), Gaps = 18/207 (8%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKSSLL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 35 DYLFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 94
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 95 GQERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQ-WLHEIDRYAA-ENVNKLLVGNKC 152
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF----EQLALKIMEVPS---LL 183
D + +RVV+ E+G A G FLE SAKT NVEQ F Q+ ++ PS
Sbjct: 153 DLEGKRVVTTEQGKEFADGLGIEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAAPAT 212
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
+ G N+ + + K+ GGCC
Sbjct: 213 KPGVNLRSQQVKKEG--------GGCC 231
>gi|58261356|ref|XP_568088.1| ras-related protein ypt1 [Cryptococcus neoformans var. neoformans
JEC21]
gi|134115607|ref|XP_773517.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50256143|gb|EAL18870.1| hypothetical protein CNBI1310 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57230170|gb|AAW46571.1| ras-related protein ypt1, putative [Cryptococcus neoformans var.
neoformans JEC21]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R+T+TN+ W +E+D Y+ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDRDTYTNVKQ-WLQEIDRYAV-EGVNKLLVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV E + A E G FLE SAK NVEQ F ++ +I + S
Sbjct: 124 SDLATKKVVEYAEAKSFADELGIPFLETSAKNATNVEQAFLTMSKQIKDRMGSSTMASGP 183
Query: 190 VKRNILKQKPEN-QSPPIGGCC 210
++ +K +N + GGCC
Sbjct: 184 GAKSTIKGLGQNVEQKTAGGCC 205
>gi|387202244|gb|AFJ68941.1| gtp-binding protein gb2, partial [Nannochloropsis gaditana CCMP526]
Length = 206
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 96/172 (55%), Positives = 115/172 (66%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISS---SVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGDSGVGKS LL+ F V DL TIGV+F +L+ + GK +KL I
Sbjct: 2 SYAYLFKSIVIGDSGVGKSCLLLQFTDRRFVQVHDL--TIGVEFGARLVHIDGKAIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W +E LYS+ + V MLV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAR-WLEEAKLYSS-PNMVIMLV 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D D R VS EG A A+ HG LFLE SA+T NVE F A KI E
Sbjct: 118 GNKCDADGRRAVSTAEGQAFAEAHGLLFLETSARTGHNVEAAFSHTAEKIYE 169
>gi|388511969|gb|AFK44046.1| unknown [Lotus japonicus]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 122/213 (57%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R VS E A A E G F+E SAK NVEQ F +A I
Sbjct: 123 SDLTANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 170 -KNRMASQPANNARPPTVNISGKPVGQSSGCCS 201
>gi|302787773|ref|XP_002975656.1| rab family GTPase [Selaginella moellendorffii]
gi|300156657|gb|EFJ23285.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 17/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEE 185
D +++VV + A A E G FLE SAK NVEQ F +A +I PS+
Sbjct: 123 CDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSAA 182
Query: 186 GSNVV--KRNILKQKPENQSPPIGGCCS 211
+ + +L+ KP CCS
Sbjct: 183 KPTTIPLRGQVLQHKP--------NCCS 202
>gi|302794149|ref|XP_002978839.1| rab family GTPase [Selaginella moellendorffii]
gi|300153648|gb|EFJ20286.1| rab family GTPase [Selaginella moellendorffii]
Length = 202
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 130/208 (62%), Gaps = 17/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEE 185
D +++VV + A A E G FLE SAK NVEQ F +A +I PS+
Sbjct: 123 CDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPSMSSA 182
Query: 186 GSNVV--KRNILKQKPENQSPPIGGCCS 211
+ + +L+ KP CCS
Sbjct: 183 KPTTIPLRGQVLQHKP--------NCCS 202
>gi|296083547|emb|CBI23542.3| unnamed protein product [Vitis vinifera]
Length = 198
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 130/205 (63%), Gaps = 13/205 (6%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEEG 186
D + +VVS E A A E G F+E SAK NVEQ F +A +I P++
Sbjct: 119 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTAR 178
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
V+ ++ +P NQ GCCS
Sbjct: 179 PPTVQ---IRGQPVNQK---SGCCS 197
>gi|56753633|gb|AAW25019.1| SJCHGC09359 protein [Schistosoma japonicum]
gi|226466726|emb|CAX69498.1| Rab-protein 8 [Schistosoma japonicum]
Length = 205
Score = 175 bits (443), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/194 (46%), Positives = 129/194 (66%), Gaps = 6/194 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGK+S+L+ F + + TIG+DFKI+ + + GK++KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKTSILLRFSDNLFNQTFISTIGIDFKIRTVDIDGKKIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+T++YYRGA GI+LVYD+T + +F N+ W + +D ++ N D KML+GNK
Sbjct: 65 AGQERFKTITTAYYRGAMGIMLVYDITNQHSFNNIK-TWMQNIDEHANN-DVEKMLLGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D D +R +S ++G+ LA H LF+E SAK+ N+ + FE LA I ME L
Sbjct: 123 CDVDEKRQISFQQGLQLANSHNILFMETSAKSNINITEAFEALATGIKVKMERNMDLNNP 182
Query: 187 SNVVKRNILKQKPE 200
+NI ++P+
Sbjct: 183 PREDTKNINSKRPK 196
>gi|326506468|dbj|BAJ86552.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326516366|dbj|BAJ92338.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +R VS E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 123 CDLADKRAVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMAASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P +Q CCS
Sbjct: 183 RPATVQIRGQPVDQKT---SCCS 202
>gi|410917514|ref|XP_003972231.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
Length = 202
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 129/202 (63%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK+ NVEQ F +A +I +
Sbjct: 123 CDLTTKKVVDYTTAKEFADNLGIPFLETSAKSSTNVEQAFMTMAAEIKKRMGPGATAGAS 182
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ KP N S GGCC
Sbjct: 183 EKSNVKIQSKPVNTSS--GGCC 202
>gi|395328454|gb|EJF60846.1| ras-domain-containing protein [Dichomitus squalens LYAD-421 SS1]
Length = 227
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 122/178 (68%), Gaps = 5/178 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + V GK++KL+IWDT
Sbjct: 12 INVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMDVKGKKVKLSIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYDV RE+F L W E++ Y + VK++VGNK
Sbjct: 72 AGQERFRTITSSYYRGAQGIILVYDVANRESFDALPK-WFSELETY-VSSSVVKIIVGNK 129
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
VD++ R VS EG A A +LF+E SAKT V++ F + +IM+ P L + G+
Sbjct: 130 VDKEYSRQVSASEGQAFAARMDALFVEASAKTAVGVQEAFRDVVERIMDTPELWQTGA 187
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 174 bits (442), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKSKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|449544952|gb|EMD35924.1| hypothetical protein CERSUDRAFT_53067 [Ceriporiopsis subvermispora
B]
Length = 223
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 121/173 (69%), Gaps = 5/173 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + V GK++KL+IWDT
Sbjct: 10 INVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESSATIGVDFRVHKMEVNGKKVKLSIWDT 69
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYDV RE+F L W E++ Y + VK++VGNK
Sbjct: 70 AGQERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSSSVVKIIVGNK 127
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
VD++ R VS EG A+ GSLF+E SAKT V + F+++ KI++ P L
Sbjct: 128 VDKEFSRQVSYSEGQQFAQRMGSLFVEASAKTSVGVREAFQEVVEKIIDTPEL 180
>gi|321478009|gb|EFX88967.1| hypothetical protein DAPPUDRAFT_304738 [Daphnia pulex]
Length = 212
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/212 (46%), Positives = 136/212 (64%), Gaps = 18/212 (8%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAREIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSPPIGGCCS 211
+N +K + P N + P GG +
Sbjct: 175 VFDINNEANGIKLG-PQHLPSNANTPSGGASA 205
>gi|297814341|ref|XP_002875054.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
gi|297320891|gb|EFH51313.1| ATRAB1B [Arabidopsis lyrata subsp. lyrata]
Length = 203
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 125/203 (61%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASDS-VNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R V E A A E G F+E SAK NVEQ F +A I + + +N
Sbjct: 123 CDLAANRAVPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P P GCCS
Sbjct: 183 RPPTVQIRGQP---VPQKNGCCS 202
>gi|307189424|gb|EFN73834.1| Ras-related protein Rab-18 [Camponotus floridanus]
Length = 224
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
KIL+IG+S VGKSS+L+ F +++ T+G+D+K K +T+ G +KL IWDTAGQE
Sbjct: 10 LKILIIGESNVGKSSILLRFTEDEFCENMQSTVGMDYKTKQITIDGNTVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG IL+YDVT R TF L + W E++ Y D VKM+VGNK+D
Sbjct: 70 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNRTDIVKMVVGNKIDLP 128
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRN 193
+ R VS EEG+ A+ H +L++E SAKT + V+ CFE+L KI++ P L + S + N
Sbjct: 129 N-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTHSTRLYDN 187
>gi|340374081|ref|XP_003385567.1| PREDICTED: ras-related protein Rab-1A-like [Amphimedon
queenslandica]
Length = 209
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 130/205 (63%), Gaps = 9/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+V+DVT +E+F+N+ VW +E+D Y++ C K++VGNK
Sbjct: 67 AGQERFRTITSSYYRGANGIIIVFDVTDQESFSNVK-VWLQEIDRYASTNVC-KLMVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV----PSLLEE 185
D +++VV A + FLE SAK NVEQ F +A +I +V P+
Sbjct: 125 CDLTNKKVVDFTTAKEFADQLSIPFLETSAKNATNVEQAFMTMAAEIKKVQGNEPAPGGG 184
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
G VK I + +P P GG C
Sbjct: 185 GGTNVK--ITQSQPIKDKPNSGGGC 207
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 120/169 (71%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+
Sbjct: 123 KCDMDDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDIL 171
>gi|340720307|ref|XP_003398582.1| PREDICTED: ras-related protein Rab-10-like isoform 1 [Bombus
terrestris]
Length = 200
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVVS G A+A+EHG F+E SAK N+++ F +L I+E
Sbjct: 123 KSDMEDKRVVSTARGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|449458327|ref|XP_004146899.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
gi|449519234|ref|XP_004166640.1| PREDICTED: ras-related protein RABD2a-like [Cucumis sativus]
Length = 201
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 128/204 (62%), Gaps = 11/204 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFENVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R VS E A A E G F+E SAK NVEQ F + I + + +N
Sbjct: 123 CDL-PNRAVSYESAKAFADEVGIPFMETSAKDATNVEQAFMAMTADIKN--RMASQPANN 179
Query: 190 VKRNI--LKQKPENQSPPIGGCCS 211
+ L+ +P NQ GGCCS
Sbjct: 180 ARPPTVQLQGQPVNQK---GGCCS 200
>gi|260787287|ref|XP_002588685.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
gi|229273853|gb|EEN44696.1| hypothetical protein BRAFLDRAFT_131227 [Branchiostoma floridae]
Length = 203
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/189 (49%), Positives = 128/189 (67%), Gaps = 7/189 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNPKSFDNISK-WLRNIDEHA-NEDVERMLIGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSL---LE 184
K D + +R+V + G +AKEHG F E SAK N+E+ F LA I+ + PS E
Sbjct: 123 KCDMEDKRIVGTDRGENIAKEHGIRFFETSAKANINIEKAFMTLAEDILRKTPSKDSGPE 182
Query: 185 EGSNVVKRN 193
GS V R+
Sbjct: 183 AGSVAVGRD 191
>gi|115916189|ref|XP_788933.2| PREDICTED: ras-related protein Rab-10 isoform 2 [Strongylocentrotus
purpuratus]
Length = 224
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 134/203 (66%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
YD FK+L+IGDS VGK++L+ F + S D TIG+DFKIK + + GK++KL IW
Sbjct: 27 YDYIFKVLVIGDSYVGKTALITIFSTGRASPYRDYQTTIGIDFKIKTVELNGKKIKLQIW 86
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + + ++ N+D KML+G
Sbjct: 87 DTAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIQEHA-NEDVEKMLLG 144
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D D +R+++++ G +AKE+G F+E SAK NVEQ F LA I++ + GS
Sbjct: 145 NKCDMDDKRMINKDRGETIAKENGIKFMETSAKANINVEQAFMTLAADILKKYPQRDTGS 204
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
V + +K+ + S CC
Sbjct: 205 PGVVKPDMKEGSSSGSK----CC 223
>gi|347964252|ref|XP_311197.3| AGAP000671-PA [Anopheles gambiae str. PEST]
gi|333467445|gb|EAA06827.3| AGAP000671-PA [Anopheles gambiae str. PEST]
Length = 204
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/203 (44%), Positives = 129/203 (63%), Gaps = 4/203 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTSTFISTIGIDFKIKTIELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFDNIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D +R V +E G +A+EH F+E SAK N+E F +LA I++ + E N
Sbjct: 123 KCDMADKRAVRKERGENIAREHDIRFMETSAKANTNIELAFRELAEAILDKVAGKETTDN 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
R ++ + + P CC+
Sbjct: 183 -PDRVVVNRSTGERLPAYKACCT 204
>gi|327505561|gb|AEA92308.1| Rab4 [Hevea brasiliensis]
Length = 202
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKCDLVDNKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEI 169
>gi|359497565|ref|XP_002265463.2| PREDICTED: GTP-binding protein YPTM2 [Vitis vinifera]
Length = 207
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 130/205 (63%), Gaps = 13/205 (6%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 127
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEEG 186
D + +VVS E A A E G F+E SAK NVEQ F +A +I P++
Sbjct: 128 DLTANKVVSYETAKAFADEIGIPFMETSAKNATNVEQAFMAMAAEIKNRMASQPAMNTAR 187
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
V+ ++ +P NQ GCCS
Sbjct: 188 PPTVQ---IRGQPVNQK---SGCCS 206
>gi|15233367|ref|NP_195311.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|75281787|sp|Q38922.1|RAB1B_ARATH RecName: Full=Ras-related protein RABB1b; Short=AtRABB1b; AltName:
Full=Ras-related protein GB2; Short=AtGB2; AltName:
Full=Ras-related protein Rab2C; Short=AtRab2C
gi|1184983|gb|AAA87883.1| ATGB2 [Arabidopsis thaliana]
gi|3805852|emb|CAA21472.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|7270538|emb|CAB81495.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|17529056|gb|AAL38738.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21436445|gb|AAM51423.1| putative GTP-binding protein GB2 [Arabidopsis thaliana]
gi|21553875|gb|AAM62968.1| GTP-binding protein GB2 [Arabidopsis thaliana]
gi|332661181|gb|AEE86581.1| GTP-binding protein GB2 [Arabidopsis thaliana]
Length = 211
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 121/172 (70%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +R VS+EEG AKEHG LFLE SA+T +NVE+ F + A KI++
Sbjct: 118 GNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169
>gi|330799096|ref|XP_003287584.1| Rab GTPase [Dictyostelium purpureum]
gi|325082448|gb|EGC35930.1| Rab GTPase [Dictyostelium purpureum]
Length = 211
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 138/217 (63%), Gaps = 19/217 (8%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTV 57
+S +S +YD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + +
Sbjct: 6 APASNKSAAYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIEL 62
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
GKR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ ++T
Sbjct: 63 EGKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT 121
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA---- 173
+ KML+GNK D ++VV G +LA E+G FLE SAK NVE+ F LA
Sbjct: 122 DS-VNKMLIGNKCDMAEKKVVDSARGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIK 180
Query: 174 LKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
++++ P+ E + + L Q P N+ GCC
Sbjct: 181 KRMIDTPN---EPPQLHSKPDLTQNPNNKK---RGCC 211
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRHIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|157107937|ref|XP_001650005.1| ras-related protein Rab-2A, putative [Aedes aegypti]
gi|170056253|ref|XP_001863947.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|108879444|gb|EAT43669.1| AAEL004902-PA [Aedes aegypti]
gi|167876016|gb|EDS39399.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 213
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/222 (45%), Positives = 138/222 (62%), Gaps = 31/222 (13%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSPPIG-----------GCC 210
+N +K + Q+ +P +G GCC
Sbjct: 175 VFDINNEANGIK---IGQQHSPTNPSLGSGNNPGGQSSSGCC 213
>gi|17137088|ref|NP_477090.1| Rab2, isoform A [Drosophila melanogaster]
gi|442622498|ref|NP_001260732.1| Rab2, isoform B [Drosophila melanogaster]
gi|194758098|ref|XP_001961299.1| GF11067 [Drosophila ananassae]
gi|194864038|ref|XP_001970739.1| GG23219 [Drosophila erecta]
gi|195474169|ref|XP_002089364.1| GE19072 [Drosophila yakuba]
gi|195580994|ref|XP_002080319.1| GD10420 [Drosophila simulans]
gi|2313035|dbj|BAA21706.1| rab2 [Drosophila melanogaster]
gi|21645117|gb|AAM70817.1| Rab2, isoform A [Drosophila melanogaster]
gi|27820101|gb|AAO25075.1| GH01619p [Drosophila melanogaster]
gi|190622597|gb|EDV38121.1| GF11067 [Drosophila ananassae]
gi|190662606|gb|EDV59798.1| GG23219 [Drosophila erecta]
gi|194175465|gb|EDW89076.1| GE19072 [Drosophila yakuba]
gi|194192328|gb|EDX05904.1| GD10420 [Drosophila simulans]
gi|220944512|gb|ACL84799.1| Rab2-PA [synthetic construct]
gi|220954388|gb|ACL89737.1| Rab2-PA [synthetic construct]
gi|440214116|gb|AGB93265.1| Rab2, isoform B [Drosophila melanogaster]
Length = 213
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 102/220 (46%), Positives = 136/220 (61%), Gaps = 27/220 (12%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSPPI---------GGCC 210
+N +K + P N S P GCC
Sbjct: 175 VFDINNEANGIKIG-QQHSPTNPSLPGAGGAAGAANSGCC 213
>gi|357445237|ref|XP_003592896.1| Ras-like protein [Medicago truncatula]
gi|92893897|gb|ABE91947.1| Ras small GTPase, Rab type [Medicago truncatula]
gi|355481944|gb|AES63147.1| Ras-like protein [Medicago truncatula]
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 123/205 (60%), Gaps = 7/205 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+L+IGDS VGKS LL+ F S DD TIGVDFKI+ + + GK KL I
Sbjct: 3 SNEYDYLFKLLIIGDSSVGKSCLLLRFADDSYDDTYISTIGVDFKIRTVELEGKTAKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ N K+LV
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDIESFNNVKQ-WLHEIDRYA-NHSVSKLLV 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D ++V A A E G FLE SAK NVEQ F +A +I G
Sbjct: 121 GNKCDLTDNKLVHTHTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEIKNKMGSQPTG 180
Query: 187 SNVVKRNI-LKQKPENQSPPIGGCC 210
S ++ +K +P Q+ CC
Sbjct: 181 SKSAAESVQMKGQPIQQNT---NCC 202
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 130/197 (65%), Gaps = 8/197 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +++D Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEVPSLLEE 185
+D RVVS +E +A+++ ++E SAKT NVE+ F +A K+ + PS
Sbjct: 123 IDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NA 180
Query: 186 GSNVVKRNILKQKPENQ 202
++ V N + P N+
Sbjct: 181 PASTVSLNTASKVPTNR 197
>gi|255634140|gb|ACU17433.1| unknown [Glycine max]
Length = 212
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D ++ R VS E A A E G F+E SAK NVEQ F +A I
Sbjct: 123 CDLEANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI 169
>gi|50553762|ref|XP_504292.1| YALI0E23067p [Yarrowia lipolytica]
gi|1173333|sp|P41924.1|RYL1_YARLI RecName: Full=Ras-like GTP-binding protein RYL1
gi|173257|gb|AAA35245.1| ras-like protein [Yarrowia lipolytica]
gi|49650161|emb|CAG79891.1| YALI0E23067p [Yarrowia lipolytica CLIB122]
gi|1097101|prf||2113252A Rab protein
Length = 203
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 123/178 (69%), Gaps = 9/178 (5%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGK 60
S +YDL K+LLIGDSGVGKS LL+ F D +P TIG+DFKI+ + + +
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCE---DQFTPSFITTIGIDFKIRTIDIGNQ 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
R+KL +WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + V Y+ N+
Sbjct: 59 RVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEG 116
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+LVGNK D D +RVVS E+G ALA + G FLE S+KT NVE+CF +A +I +
Sbjct: 117 VELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRD 174
>gi|323337771|gb|EGA79014.1| Sec4p [Saccharomyces cerevisiae Vin13]
Length = 186
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F L
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFHLG 177
>gi|226468180|emb|CAX76317.1| Rab-protein 8 [Schistosoma japonicum]
Length = 198
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 127/201 (63%), Gaps = 8/201 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGII+VYDVT + +F N+ W +E++ Y+ N ++LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVYDVTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V + + AKEH FLE SAK NVE F ++A +I + ++ +
Sbjct: 123 CDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMPSN 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
V N +P +S GGCC
Sbjct: 183 VTVN--STQPVTKS---GGCC 198
>gi|195028532|ref|XP_001987130.1| GH21751 [Drosophila grimshawi]
gi|195383514|ref|XP_002050471.1| GJ22175 [Drosophila virilis]
gi|193903130|gb|EDW01997.1| GH21751 [Drosophila grimshawi]
gi|194145268|gb|EDW61664.1| GJ22175 [Drosophila virilis]
Length = 213
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|301117468|ref|XP_002906462.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|2500076|sp|Q01890.1|YPT1_PHYIN RecName: Full=Ras-like GTP-binding protein YPT1
gi|940432|gb|AAB40355.1| ras related protein PiYpt1 [Phytophthora infestans]
gi|262107811|gb|EEY65863.1| Rab1 family GTPase (PiYpt1) [Phytophthora infestans T30-4]
gi|348688420|gb|EGZ28234.1| hypothetical protein PHYSODRAFT_309136 [Phytophthora sojae]
Length = 201
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++RVVS + A+ G FLE SAK NVE+ F +A +I + + + V
Sbjct: 123 SDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMA----NAPV 178
Query: 190 VKRNILKQKPENQSPPIGG--CC 210
+ +K P Q P GG CC
Sbjct: 179 APKAGVKLTPGQQVPSNGGSKCC 201
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDMERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|325179736|emb|CCA14139.1| Rab8 family GTPase putative [Albugo laibachii Nc14]
Length = 219
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 99/214 (46%), Positives = 138/214 (64%), Gaps = 15/214 (7%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTV 57
G + N +D+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + +
Sbjct: 16 GRMARHENPFDMQIKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNIEL 72
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
GK++KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++
Sbjct: 73 DGKKIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA- 130
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+ K+L+GNK D ++V+S EEG ALA E+G F E SAK NVE F +A ++
Sbjct: 131 DVHVNKILIGNKCDMMDDKVISTEEGQALADEYGVRFYETSAKNNINVEGGFIDIAREVK 190
Query: 178 EVPSLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
L+EEG + K +I L K PP GCC
Sbjct: 191 N--RLMEEGGSHKKESINLSAKA---IPPKKGCC 219
>gi|345491599|ref|XP_001606644.2| PREDICTED: ras-related protein Rab-10-like [Nasonia vitripennis]
Length = 200
Score = 174 bits (440), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ + W + +D ++ N++ KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVN-WLRNIDEHA-NENVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + R VS E G A+A+EHG F+E SAK N+++ F +LA I++
Sbjct: 123 KSDMEDRREVSTERGEAIAREHGIRFMETSAKANINIDRAFRELAEAILD 172
>gi|402594067|gb|EJW87994.1| rab family protein 10 [Wuchereria bancrofti]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/203 (45%), Positives = 131/203 (64%), Gaps = 8/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D KML+GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKMLLGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVSRE G +A +HG FLE SAK +++ F LA I++ + EG
Sbjct: 124 CDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNEG--- 180
Query: 190 VKRNILKQKPENQSPPIG--GCC 210
+K+ ++ + IG CC
Sbjct: 181 MKQPTIRPAEPQSNVAIGRLSCC 203
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|281203623|gb|EFA77820.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 214
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 123/178 (69%), Gaps = 9/178 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+S+ +S +YD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + +
Sbjct: 7 TSANKSAAYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELE 63
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ ++T
Sbjct: 64 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT- 121
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+ KML+GNK D ++VV G ALA EHG FLE SAK NVE+ F LA I
Sbjct: 122 ESVNKMLIGNKCDLPEKKVVDSSRGKALADEHGIKFLETSAKNSINVEEAFISLAKDI 179
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGGQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|170592955|ref|XP_001901230.1| Ras-related protein Rab-10 [Brugia malayi]
gi|158591297|gb|EDP29910.1| Ras-related protein Rab-10, putative [Brugia malayi]
Length = 226
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 132/203 (65%), Gaps = 8/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 29 YDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 88
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D KML+GNK
Sbjct: 89 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKMLLGNK 146
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVSRE G +A +HG FLE SAK +++ F LA I++ + EG
Sbjct: 147 CDMAERRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPIKNEGMK- 205
Query: 190 VKRNILKQKPENQSPPIG--GCC 210
+ I +P+N + IG CC
Sbjct: 206 -QPTIRPAEPQN-NVAIGRLSCC 226
>gi|1381678|gb|AAB97115.1| small GTP-binding protein [Glycine max]
Length = 202
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 123/213 (57%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++ R VS E A A G F+E SAK NVEQ F + I
Sbjct: 123 CDLEANRAVSYETAKAFADGIGIPFMETSAKDATNVEQAFMAMTASI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GGCCS
Sbjct: 170 -KDRMASQPANNARPPTVQIRGQPVAQKGGCCS 201
>gi|350417568|ref|XP_003491486.1| PREDICTED: ras-related protein Rab-10-like [Bombus impatiens]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T +TF N+ W + +D ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKTFENIVK-WLRNIDEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVVS G A+A+EHG F+E SAK N+++ F +L I+E
Sbjct: 123 KSDMEDKRVVSTGRGEAIAREHGIRFMETSAKADINIDRAFNELTEAILE 172
>gi|297798332|ref|XP_002867050.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
gi|297312886|gb|EFH43309.1| GTP-binding 2 [Arabidopsis lyrata subsp. lyrata]
Length = 211
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 121/172 (70%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +R VS+EEG AKEHG LFLE SA+T +NVE+ F + A KI++
Sbjct: 118 GNKCDLAHKRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIKTAAKILQ 169
>gi|255071629|ref|XP_002499489.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226514751|gb|ACO60747.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 204
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELEGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLNEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D ++R V E A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTAKRAVDYETAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|393220275|gb|EJD05761.1| GTP-binding protein ypt1 [Fomitiporia mediterranea MF3/22]
Length = 202
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 130/202 (64%), Gaps = 7/202 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +T+ N+ W +E+D Y+++ + K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTYKNVKQ-WLQEIDRYASD-NVNKLLVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-VPSLLEEGSN 188
DR +E+VV AK+ G FLE SAKT NVEQ F +A +I E + + +
Sbjct: 124 SDRTNEKVVEYAVASEFAKQLGIPFLETSAKTALNVEQAFLTMAREIKERTGTATKANKD 183
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
V + K+ QS G CC
Sbjct: 184 TV---VPKEGQALQSNSGGNCC 202
>gi|125806738|ref|XP_001360146.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|195149123|ref|XP_002015507.1| GL11116 [Drosophila persimilis]
gi|195455130|ref|XP_002074572.1| GK23088 [Drosophila willistoni]
gi|54635317|gb|EAL24720.1| GA17076 [Drosophila pseudoobscura pseudoobscura]
gi|194109354|gb|EDW31397.1| GL11116 [Drosophila persimilis]
gi|194170657|gb|EDW85558.1| GK23088 [Drosophila willistoni]
Length = 213
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|387914198|gb|AFK10708.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392881360|gb|AFM89512.1| Ras-related protein ORAB-1 [Callorhinchus milii]
gi|392884280|gb|AFM90972.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 126 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 185
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
NI QS P+ GGCC
Sbjct: 186 EKSNVNI-------QSTPVKSSSGGCC 205
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I++ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|212275502|ref|NP_001130744.1| Ras protein RIC1 [Zea mays]
gi|194690000|gb|ACF79084.1| unknown [Zea mays]
gi|195605598|gb|ACG24629.1| ras-related protein RIC1 [Zea mays]
gi|195606872|gb|ACG25266.1| ras-related protein RIC1 [Zea mays]
gi|223942789|gb|ACN25478.1| unknown [Zea mays]
gi|413950363|gb|AFW83012.1| Ras protein RIC1 [Zea mays]
Length = 203
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 95/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D RVVS E G ALA + G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAENRVVSYEAGKALADDIGIPFLETSAKDATNVEKAFMTMAGEI 169
>gi|16974365|gb|AAL31108.1| AT4g17530/dl4800c [Arabidopsis thaliana]
Length = 202
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G +
Sbjct: 123 CDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GC S
Sbjct: 183 PPTVQIRGQPVNQQ---SGCAS 201
>gi|403413519|emb|CCM00219.1| predicted protein [Fibroporia radiculosa]
Length = 224
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 122/182 (67%), Gaps = 5/182 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGK 60
+ Q + ++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + V GK
Sbjct: 2 AQAQDKTSTVNVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVKGK 61
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL+IWDTAGQERFRT+TSSYYRGAQGIILVYDV RE+F L W E++ Y +
Sbjct: 62 KVKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVANRESFDALPR-WYSELETY-VSPS 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
VK++VGNKVD++ R VS EG A+ SLF E SAKT V + F+++ KI++ P
Sbjct: 120 VVKIIVGNKVDKEFSRQVSHSEGQHFAERMNSLFFEASAKTSIGVREAFQEVVEKILDTP 179
Query: 181 SL 182
L
Sbjct: 180 EL 181
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVNIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|307105958|gb|EFN54205.1| GTP-binding protein yptV1 [Chlorella variabilis]
Length = 204
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/172 (53%), Positives = 116/172 (67%), Gaps = 3/172 (1%)
Query: 6 GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKL 64
+ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 AHQSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRT+TSSYYRGA GII+V+DVT +E+F N+ W E+D Y+ N++ K+
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIVVFDVTDQESFNNVKQ-WLNEIDRYA-NENVNKL 119
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
LVGNK D S+RVV A A E G F+E SAK NVEQ F +A +I
Sbjct: 120 LVGNKTDLTSKRVVDFNTAKAFADEIGIPFIETSAKNASNVEQAFMTMAAEI 171
>gi|195120996|ref|XP_002005007.1| GI19298 [Drosophila mojavensis]
gi|193910075|gb|EDW08942.1| GI19298 [Drosophila mojavensis]
Length = 213
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|323309243|gb|EGA62464.1| Sec4p [Saccharomyces cerevisiae FostersO]
Length = 186
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F L
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEXFFHLG 177
>gi|452819428|gb|EME26487.1| Rab family, other [Galdieria sulphuraria]
Length = 203
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 116/169 (68%), Gaps = 3/169 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYNESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N+ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLHEIDRYA-NESVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D +++VV A G FLE SAKT ENVEQ F +A +I E
Sbjct: 123 NDLTTKKVVDTATAKEFADSLGIKFLETSAKTSENVEQAFITMAQEIKE 171
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|224119896|ref|XP_002331089.1| predicted protein [Populus trichocarpa]
gi|118486589|gb|ABK95133.1| unknown [Populus trichocarpa]
gi|222872817|gb|EEF09948.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 123/204 (60%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + GK KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTSKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VV + A A E G FLE SAK NVEQ F +A +I + S
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEIKKKMSNQPTA 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+N +K +P Q CC
Sbjct: 180 NNSTGTVQMKGQPIEQK---NNCC 200
>gi|290970854|ref|XP_002668282.1| rab family small GTPase [Naegleria gruberi]
gi|284081592|gb|EFC35538.1| rab family small GTPase [Naegleria gruberi]
Length = 197
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 132/209 (63%), Gaps = 21/209 (10%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S ++D +FK++L+GDS GKSS++ F + +SPTIGVDFK+K + V K++KLTI
Sbjct: 3 SKAFDHNFKLVLVGDSATGKSSIITQFTEDEFKEQMSPTIGVDFKVKFMNVNRKKVKLTI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
+DTAG A GIILVYDVTR ETF N+ + W KE DLYST ++CVK+L+
Sbjct: 63 FDTAG-------------NAHGIILVYDVTREETFNNIKN-WLKECDLYSTFEECVKLLI 108
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK+D ER VS ++ AK + +++E SAKT+ENV++ FE++ +I+ +LLE
Sbjct: 109 GNKIDLKEERKVSLQDAQNFAKSNNMVYIETSAKTKENVDKAFEEVVYQILNTTNLLEST 168
Query: 187 SNVVKR-----NILKQKPENQSPPIGGCC 210
V + NI +P N+S GCC
Sbjct: 169 EPVRNKPTDNVNISTSEP-NESEGGSGCC 196
>gi|323333722|gb|EGA75114.1| Sec4p [Saccharomyces cerevisiae AWRI796]
Length = 186
Score = 173 bits (439), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 96/175 (54%), Positives = 122/175 (69%), Gaps = 10/175 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F L
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEYFFHLG 177
>gi|328874798|gb|EGG23163.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 205
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FKILLIGDSGVGKS LL+ F S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 5 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYD T +++F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +E+VV + + A+ G F+E SAK NVE+CF +A I
Sbjct: 123 TDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDI 169
>gi|206553|gb|AAA42006.1| ras protein [Rattus norvegicus]
Length = 205
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 130/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK +NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNEKNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|401410672|ref|XP_003884784.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
gi|325119202|emb|CBZ54756.1| hypothetical protein NCLIV_051820 [Neospora caninum Liverpool]
Length = 202
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT R++F N+ + W E+D Y+ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRDSFNNVKN-WMMEIDKYAM-EGVSKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S+RVVS EEG A F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTSKRVVSFEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEI 169
>gi|131785|sp|P22125.1|RAB1_DISOM RecName: Full=Ras-related protein ORAB-1
gi|213123|gb|AAA49234.1| GTP-binding protein [Discopyge ommata]
Length = 202
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 182
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
NI QS P+ GGCC
Sbjct: 183 EKSNVNI-------QSTPVKSSGGGCC 202
>gi|312382073|gb|EFR27648.1| hypothetical protein AND_05520 [Anopheles darlingi]
Length = 182
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS---VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|224129738|ref|XP_002328790.1| predicted protein [Populus trichocarpa]
gi|222839088|gb|EEE77439.1| predicted protein [Populus trichocarpa]
Length = 201
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKCDLVENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEI 169
>gi|145508820|ref|XP_001440354.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833819|emb|CAI39368.1| rab_A22 [Paramecium tetraurelia]
gi|124407571|emb|CAK72957.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 121/167 (72%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKILLIG+S VGKSSLL+ F + ++ PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFADNVFNESFLPTIGVDFKIRTFDLNGKTVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+T+SYY+GA GIILVYDVT +++F ++ + W EV+ Y+ N++ V++LVGNK
Sbjct: 67 AGQERFKTITNSYYKGAHGIILVYDVTDKQSFKDVEN-WLAEVEKYA-NENVVRVLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
VD +S+R V+ EEG LA F+E SAK NVE+ F LA +I
Sbjct: 125 VDLESKREVTSEEGKELADSLNIRFIETSAKNSSNVEKAFITLANEI 171
>gi|281203215|gb|EFA77416.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/177 (53%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FKILLIGDSGVGKS LL+ F S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 5 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYD T +++F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
D +E+VV + + A+ G F+E SAK NVE+CF +A I + ++E
Sbjct: 123 TDLVNEKVVDTNQAKSFAESMGIPFIETSAKNATNVEECFCSMARDIKNRLADIQEA 179
>gi|440794437|gb|ELR15598.1| ras-related protein Rab-2A, putative [Acanthamoeba castellanii str.
Neff]
Length = 200
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 94/176 (53%), Positives = 119/176 (67%), Gaps = 7/176 (3%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLK 63
Q+ Y FK +++GD+ VGKS LL+ F V DL TIGV+F + LT+ ++K
Sbjct: 15 QALPYKYLFKYIIVGDTAVGKSCLLLQFTDKRFQPVHDL--TIGVEFGSRTLTIEDNQVK 72
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQE+FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ YS N + V
Sbjct: 73 LQIWDTAGQEKFRSITRSYYRGAAGALLVYDITRRETFEHLTS-WLEDCRKYS-NSNIVI 130
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
ML+GNK D +S+R VS+EEG A AKEH LFLE SAKT ENVEQ F A I E
Sbjct: 131 MLIGNKCDLESKRQVSKEEGAAFAKEHNLLFLETSAKTAENVEQAFINTARTIYET 186
>gi|358248394|ref|NP_001239874.1| uncharacterized protein LOC100796206 [Glycine max]
gi|414832|gb|AAA34003.1| Rab7p [Glycine max]
Length = 201
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 96/170 (56%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDTVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV A A E G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSINVEQAFLTMAAEI 169
>gi|384247689|gb|EIE21175.1| GTP-binding protein YPTC1 [Coccomyxa subellipsoidea C-169]
Length = 202
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 116/167 (69%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|89027972|gb|ABD59352.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 127/209 (60%), Gaps = 11/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PS 181
GNK D R V A A+E G FLE SAK NVE+ F ++ I + +
Sbjct: 120 GNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
L + SN+V+ +K +P Q CC
Sbjct: 180 LERKPSNIVQ---MKGQPIQQEQQKSRCC 205
>gi|390594811|gb|EIN04220.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 272
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 121/178 (67%), Gaps = 5/178 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKL 64
S ++ K+LLIG+S VGKSS L+ F ++ S TIGVDF++ + V GK++KL
Sbjct: 6 SGDAPINVKLLLIGNSSVGKSSFLLRFSDEQWLPEEEASATIGVDFRVHKMEVKGKKVKL 65
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
+IWDTAGQERFRT+TSSYYRGAQGIIL+YDV+ RE+F L W E++ Y + K+
Sbjct: 66 SIWDTAGQERFRTITSSYYRGAQGIILMYDVSNRESFDALPR-WFSELETY-VSPSVAKI 123
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
+VGNKVD++ R V+ EG A A+ SLF+E SAKT V + FE+L +IM+ P L
Sbjct: 124 IVGNKVDKEFSRQVATGEGAAFAQRMDSLFIEASAKTAVGVSEAFEELVERIMDTPEL 181
>gi|303732|dbj|BAA02117.1| GTP-binding protein [Pisum sativum]
gi|738941|prf||2001457J GTP-binding protein
Length = 203
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + RVVS + A + G F+E SAK NVE F +A I + + +N
Sbjct: 123 SDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GGCCS
Sbjct: 183 RPPTVQIRGQPVGQK---GGCCS 202
>gi|195331895|ref|XP_002032634.1| GM20894 [Drosophila sechellia]
gi|194124604|gb|EDW46647.1| GM20894 [Drosophila sechellia]
Length = 200
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D DS R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLDSRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|206725460|ref|NP_001128655.1| RAB1A, member RAS oncogene family [Taeniopygia guttata]
gi|397529551|ref|NP_001257591.1| ras-related protein Rab-1A [Gallus gallus]
gi|345329074|ref|XP_001513393.2| PREDICTED: ras-related protein Rab-1A-like [Ornithorhynchus
anatinus]
gi|197127903|gb|ACH44401.1| putative RAB1B member RAS oncogene family variant 3 [Taeniopygia
guttata]
gi|197127905|gb|ACH44403.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSS--GGCC 205
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 173 bits (438), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLGNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|324528770|gb|ADY48949.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 201
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 93/201 (46%), Positives = 129/201 (64%), Gaps = 6/201 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T+SYYRGA GI+LVYD+T ++F N++ W + +D +++ +D KML+GNK
Sbjct: 66 AGQERFHTITTSYYRGAMGIMLVYDITNAKSFDNIAK-WLRNIDEHAS-EDVEKMLLGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D RVVSRE G +A +HG FLE SAK +++ F LA I++ EE +
Sbjct: 124 CDMADRRVVSRERGEKIANDHGIRFLETSAKANIQIDKAFYDLAEAILDKMPNKEENA-- 181
Query: 190 VKRNILKQKPENQSPPIGGCC 210
K+ ++ S GCC
Sbjct: 182 -KQPTIRPVDSGASTGRVGCC 201
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 130/205 (63%), Gaps = 12/205 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GKR+KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + ++ ++ N+D KML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISK-WLRNIEEHA-NEDVEKMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + RVVS+ +G +A EH F E SAK N+E+ F LA I+ E +
Sbjct: 123 KCDMEDVRVVSKAKGEQIASEHNIRFFETSAKANINIEKAFLTLAEDILHKTPGKEPTNE 182
Query: 189 VVKRNILKQKPENQSPPIGG--CCS 211
V N N+S GG CCS
Sbjct: 183 NVDVN-------NRSGSSGGVRCCS 200
>gi|427782855|gb|JAA56879.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 207
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 117/172 (68%), Gaps = 3/172 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+S+L F + D TIG+DFKI+++ + GK++KL I
Sbjct: 2 AKSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT+ TF N+ W + D ++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIK-TWIRNTDEHAA-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D + R VS+E G LA EH F+E SA + NVE+ F LA I E
Sbjct: 120 GNKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLARDIKE 171
>gi|116782525|gb|ABK22540.1| unknown [Picea sitchensis]
gi|116784933|gb|ABK23527.1| unknown [Picea sitchensis]
gi|224284724|gb|ACN40093.1| unknown [Picea sitchensis]
Length = 202
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 101/206 (49%), Positives = 128/206 (62%), Gaps = 13/206 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEE 185
D + R V + A A E G FLE SAK NVEQ F +A +I P++
Sbjct: 123 CDLTANRAVDYDTAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEIKNRMASQPAMNSS 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
V+ +K +P Q GCCS
Sbjct: 183 RPATVQ---MKGQPVVQK---SGCCS 202
>gi|302787058|ref|XP_002975299.1| rab family GTPase [Selaginella moellendorffii]
gi|302822855|ref|XP_002993083.1| rab family GTPase [Selaginella moellendorffii]
gi|300139083|gb|EFJ05831.1| rab family GTPase [Selaginella moellendorffii]
gi|300156873|gb|EFJ23500.1| rab family GTPase [Selaginella moellendorffii]
Length = 212
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 136/216 (62%), Gaps = 10/216 (4%)
Query: 1 MGSSSGQSNS-YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVA 58
M S SG++ + YD K+LLIGDSGVGKS LL+ F +S TIG+DFKI+ + +
Sbjct: 1 MASGSGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDNSFTTSFITTIGIDFKIRTIELD 60
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119
Query: 119 QDCVKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+ K+LVGNK D D S+R V E+G ALA E G F E SAKT +NVE F +A I
Sbjct: 120 -NVNKILVGNKADMDESKRAVPTEKGQALADEFGIKFFETSAKTNQNVEDVFFTIARDIK 178
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPI---GGCC 210
+ L E + N+ +P+ P CC
Sbjct: 179 Q--RLAESDAKAEPGNLRLNRPDTSRGPHKKEKSCC 212
>gi|89258411|gb|ABD65429.1| Rab2 [Suberites domuncula]
Length = 214
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 99/220 (45%), Positives = 138/220 (62%), Gaps = 26/220 (11%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIEGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFDHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D D++R V EEG+A AKEHG +F+E SAKT NVE+ F A E+ + +++G
Sbjct: 118 GNKSDLDAKREVKSEEGLAFAKEHGLVFMETSAKTAANVEEAFINTA---KEIYTKIQDG 174
Query: 187 SNVVKR--NILKQKPENQSPPI--------------GGCC 210
V N +K P++Q+ GGCC
Sbjct: 175 VFDVNNEANGIKLGPQHQTGGTVRPGTTEPGKPQGSGGCC 214
>gi|2245111|emb|CAB10533.1| GTP-binding RAB1C like protein [Arabidopsis thaliana]
Length = 221
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/201 (49%), Positives = 125/201 (62%), Gaps = 6/201 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDTA
Sbjct: 25 DYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDTA 84
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 85 GQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNKC 142
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D S++VVS E A A E G FLE SAK NVE+ F + I + G +
Sbjct: 143 DLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSKP 202
Query: 191 KRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 203 PTVQIRGQPVNQQ---SGCCS 220
>gi|392876316|gb|AFM86990.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI++VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIMVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 126 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 185
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
NI QS P+ GGCC
Sbjct: 186 EKSNVNI-------QSTPVKSSSGGCC 205
>gi|326914865|ref|XP_003203743.1| PREDICTED: ras-related protein Rab-1A-like [Meleagris gallopavo]
Length = 231
Score = 172 bits (437), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 34 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 93
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 94 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 151
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 152 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 211
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 212 EKSNVKIQSTPVKQSS--GGCC 231
>gi|255549670|ref|XP_002515886.1| protein with unknown function [Ricinus communis]
gi|223544791|gb|EEF46306.1| protein with unknown function [Ricinus communis]
Length = 219
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 102/203 (50%), Positives = 131/203 (64%), Gaps = 9/203 (4%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDTA
Sbjct: 22 DYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDTA 81
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+V+DVT E+F N+ W E+D ++T+ + K+LVGNK
Sbjct: 82 GQERFRTITSSYYRGAHGIIIVFDVTDEESFRNVKG-WLTEIDKFATD-NINKLLVGNKC 139
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D ++RVVS E A A E G FLE SAK NVE F +A +I + + + +N V
Sbjct: 140 DVTNKRVVSNETAKAFADEIGIPFLETSAKNATNVEDAFMTMAAEIKKRMA-SQPAANAV 198
Query: 191 KRNI--LKQKPENQSPPIGGCCS 211
+ ++ KP NQS CCS
Sbjct: 199 RPTTVPIRGKPVNQSTT---CCS 218
>gi|4758988|ref|NP_004152.1| ras-related protein Rab-1A isoform 1 [Homo sapiens]
gi|6679587|ref|NP_033022.1| ras-related protein Rab-1A [Mus musculus]
gi|45433570|ref|NP_112352.2| ras-related protein Rab-1A [Rattus norvegicus]
gi|55741705|ref|NP_001003153.1| ras-related protein Rab-1A [Canis lupus familiaris]
gi|381140057|ref|NP_001244201.1| RAB1A, member RAS oncogene family [Macaca mulatta]
gi|149727528|ref|XP_001493347.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Equus
caballus]
gi|291386694|ref|XP_002709883.1| PREDICTED: RAB1A, member RAS oncogene family isoform 1 [Oryctolagus
cuniculus]
gi|296223703|ref|XP_002757737.1| PREDICTED: ras-related protein Rab-1A-like [Callithrix jacchus]
gi|301784597|ref|XP_002927708.1| PREDICTED: ras-related protein Rab-1A-like [Ailuropoda melanoleuca]
gi|332813296|ref|XP_530454.3| PREDICTED: ras-related protein Rab-1A isoform 3 [Pan troglodytes]
gi|344283860|ref|XP_003413689.1| PREDICTED: ras-related protein Rab-1A-like [Loxodonta africana]
gi|348563536|ref|XP_003467563.1| PREDICTED: ras-related protein Rab-1A-like [Cavia porcellus]
gi|354471845|ref|XP_003498151.1| PREDICTED: ras-related protein Rab-1A-like [Cricetulus griseus]
gi|395731755|ref|XP_002812010.2| PREDICTED: ras-related protein Rab-1A [Pongo abelii]
gi|395829763|ref|XP_003788014.1| PREDICTED: ras-related protein Rab-1A [Otolemur garnettii]
gi|397521755|ref|XP_003830953.1| PREDICTED: ras-related protein Rab-1A [Pan paniscus]
gi|402891075|ref|XP_003908785.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|402891077|ref|XP_003908786.1| PREDICTED: ras-related protein Rab-1A [Papio anubis]
gi|403260564|ref|XP_003922736.1| PREDICTED: ras-related protein Rab-1A [Saimiri boliviensis
boliviensis]
gi|410954918|ref|XP_003984106.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Felis catus]
gi|51338603|sp|P62820.3|RAB1A_HUMAN RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338604|sp|P62821.3|RAB1A_MOUSE RecName: Full=Ras-related protein Rab-1A; AltName:
Full=YPT1-related protein
gi|51338716|sp|Q6NYB7.3|RAB1A_RAT RecName: Full=Ras-related protein Rab-1A
gi|51338790|sp|P62822.3|RAB1A_CANFA RecName: Full=Ras-related protein Rab-1A
gi|2144600|pir||TVDGYP GTP-binding protein Rab1 - dog
gi|6969622|gb|AAF33844.1|AF226873_1 small GTP-binding protein RAB1A [Mus musculus]
gi|20379034|gb|AAM21077.1|AF498929_1 small GTP binding protein RAB1A [Homo sapiens]
gi|55457|emb|CAA68284.1| unnamed protein product [Mus musculus]
gi|550060|gb|AAA60240.1| GTP-binding protein [Homo sapiens]
gi|763158|emb|CAA33760.1| GTP-binding protein [Mus musculus]
gi|6006435|emb|CAB56775.1| rab1 [Canis lupus familiaris]
gi|12654175|gb|AAH00905.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|26329917|dbj|BAC28697.1| unnamed protein product [Mus musculus]
gi|33096735|emb|CAE11872.1| hypothetical protein [Homo sapiens]
gi|37515280|gb|AAH02077.3| RAB1, member RAS oncogene family [Mus musculus]
gi|44890248|gb|AAH66662.1| RAB1, member RAS oncogene family [Rattus norvegicus]
gi|49168464|emb|CAG38727.1| RAB1A [Homo sapiens]
gi|54695926|gb|AAV38335.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|54695928|gb|AAV38336.1| RAB1A, member RAS oncogene family [Homo sapiens]
gi|61355917|gb|AAX41190.1| RAB1A member RAS oncogene family [synthetic construct]
gi|61355926|gb|AAX41191.1| RAB1A member RAS oncogene family [synthetic construct]
gi|74147521|dbj|BAE38660.1| unnamed protein product [Mus musculus]
gi|74189058|dbj|BAE39292.1| unnamed protein product [Mus musculus]
gi|74197039|dbj|BAE35072.1| unnamed protein product [Mus musculus]
gi|112292935|dbj|BAF02845.1| Rab1A [Mus musculus]
gi|119620324|gb|EAW99918.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|119620328|gb|EAW99922.1| RAB1A, member RAS oncogene family, isoform CRA_b [Homo sapiens]
gi|120419448|gb|ABM21543.1| RAB1A, member RAS oncogene family [Bos taurus]
gi|123994817|gb|ABM85010.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|148675882|gb|EDL07829.1| RAB1, member RAS oncogene family, isoform CRA_a [Mus musculus]
gi|149044748|gb|EDL97934.1| rCG23301, isoform CRA_b [Rattus norvegicus]
gi|159906367|gb|ABX10872.1| RAB1A [Capra hircus]
gi|189054895|dbj|BAG37879.1| unnamed protein product [Homo sapiens]
gi|190689469|gb|ACE86509.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|190690831|gb|ACE87190.1| RAB1A, member RAS oncogene family protein [synthetic construct]
gi|307685159|dbj|BAJ20510.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|355562769|gb|EHH19363.1| hypothetical protein EGK_20053 [Macaca mulatta]
gi|380783935|gb|AFE63843.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|380783937|gb|AFE63844.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|383420425|gb|AFH33426.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|384948550|gb|AFI37880.1| ras-related protein Rab-1A isoform 1 [Macaca mulatta]
gi|410220890|gb|JAA07664.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410220892|gb|JAA07665.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308940|gb|JAA33070.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308942|gb|JAA33071.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410308944|gb|JAA33072.1| RAB1A, member RAS oncogene family [Pan troglodytes]
gi|410350819|gb|JAA42013.1| RAB1A, member RAS oncogene family [Pan troglodytes]
Length = 205
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|326510941|dbj|BAJ91818.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326531646|dbj|BAJ97827.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 204
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 103/208 (49%), Positives = 128/208 (61%), Gaps = 10/208 (4%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++ YD FK+LLIGDS VGKS LL+ F + VD TIGVDFKI+ + + GK +KL I
Sbjct: 3 ASEYDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT RE+F N+ W E+D Y+++ C K+LV
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKQ-WLSEIDRYASDSVC-KLLV 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLL 183
GNK D +VV EE A A+ G FLE SAK NVE F ++ +I M
Sbjct: 121 GNKCDLVDSKVVDTEEAKAFAESLGMNFLETSAKESINVETAFLTMSSEIKNKMASQPAA 180
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCCS 211
E S V +K +P Q CCS
Sbjct: 181 ERKSTVHVH--MKGQPIQQQQS--SCCS 204
>gi|260942787|ref|XP_002615692.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
gi|238850982|gb|EEQ40446.1| hypothetical protein CLUG_04574 [Clavispora lusitaniae ATCC 42720]
Length = 204
Score = 172 bits (437), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 120/180 (66%), Gaps = 9/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S+ S SYD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 2 SAKAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIESN 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT TF N+ + W + V ++ N
Sbjct: 59 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARTFENVEN-WFQTVTQHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D LVGNK D + R VSRE+G LA FLE SAKT ENVE F +LA I E
Sbjct: 117 EDAQIFLVGNKSDDEENRQVSREQGQQLASSLNIPFLEASAKTNENVESIFYELASLIQE 176
>gi|389584207|dbj|GAB66940.1| small GTPase Rab1A [Plasmodium cynomolgi strain B]
Length = 221
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 105/226 (46%), Positives = 133/226 (58%), Gaps = 29/226 (12%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFI----------------------SSSVDDLSPT 45
++SYD FKILLIGDSGVGKS LL+ F + D T
Sbjct: 2 NDSYDSLFKILLIGDSGVGKSCLLLRFARKRGRQTYLINRFETENDQINDDTYTDSYIST 61
Query: 46 IGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLS 105
IGVDFKIK + + K +KL IWDTAGQERFRT+TSSYYRGAQGII+VYDVT R++F N+
Sbjct: 62 IGVDFKIKTIEIEDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVK 121
Query: 106 DVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENV 165
+ W E++ Y++ +D K+L+GNK+D ++R VS EEG LA FLE SAK NV
Sbjct: 122 N-WIIEIEKYAS-EDVQKILIGNKIDLKNDRNVSYEEGKELADSCNIQFLETSAKIAHNV 179
Query: 166 EQCFEQLALKIMEVPSLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
EQ F+ +A +I L E + NI L KP + CC
Sbjct: 180 EQAFKTMAHEIKNKSQL--ENQQKGRANINLNAKPIKDNKK--KCC 221
>gi|237843001|ref|XP_002370798.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|211968462|gb|EEB03658.1| RAS small GTpase, putative [Toxoplasma gondii ME49]
gi|221502504|gb|EEE28231.1| Rab family protein [Toxoplasma gondii VEG]
Length = 202
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT RE+F N+ + W E+D Y+ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S+R V+ EEG A F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEI 169
>gi|54695924|gb|AAV38334.1| RAB1A, member RAS oncogene family [synthetic construct]
gi|61365844|gb|AAX42772.1| RAB1A member RAS oncogene family [synthetic construct]
Length = 206
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|345480659|ref|XP_003424189.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Nasonia
vitripennis]
Length = 210
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 95/209 (45%), Positives = 137/209 (65%), Gaps = 7/209 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK + S+R VS+E G ALA E+G F+E SAK+ NVE+ F LA I ++ L+E
Sbjct: 120 GNKCELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLKE 179
Query: 186 GSNVVK---RNILKQKPENQSPPIGGCCS 211
SN K + +P+ + P + CS
Sbjct: 180 ASNPPKGGGHQLKAMEPQRKPPSLFSRCS 208
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD++ ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDISNTKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I++ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILKKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|417408915|gb|JAA50989.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 237
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 40 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 99
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 100 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 157
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 158 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 217
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 218 EKSNVKIQSTPVKQSG--GGCC 237
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPTGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|387017956|gb|AFJ51096.1| ras-related protein Rab-1A [Crotalus adamanteus]
Length = 205
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATSGGAEKSNVKIQSTPVKQSS--GGCC 205
>gi|91087587|ref|XP_971919.1| PREDICTED: similar to Rab-protein 2 CG3269-PA [Tribolium castaneum]
gi|270010699|gb|EFA07147.1| hypothetical protein TcasGA2_TC010138 [Tribolium castaneum]
Length = 213
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W + +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLDDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|221220558|gb|ACM08940.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 129/207 (62%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK+ NVEQ F +A +I + P GS
Sbjct: 123 CDLTTKKVVDYTTAKEFADNLGIPFLEASAKSATNVEQAFMTMAAEIKKRMGPGATAGGS 182
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
K + QS P+ GGCC
Sbjct: 183 E-------KSNVKIQSTPVKTSSGGCC 202
>gi|307214891|gb|EFN89759.1| Ras-related protein Rab-18 [Harpegnathos saltator]
Length = 223
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 87/174 (50%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
KIL+IG+S VGKSS+L+ F +++ T+G+D+K K +++ G +KL IWDTAGQE
Sbjct: 10 LKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQISIDGNIVKLAIWDTAGQE 69
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG IL+YDVT R TF L + W E++ Y D VKM+VGNK+D
Sbjct: 70 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVVGNKIDLP 128
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
+ R VS EEG+ A+ H +L++E SAKT + V+ CFE+L KI++ P L + S
Sbjct: 129 N-REVSTEEGLQFARRHQTLYIESSAKTADGVKCCFEELVQKIIQTPGLWDTHS 181
>gi|242073190|ref|XP_002446531.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
gi|241937714|gb|EES10859.1| hypothetical protein SORBIDRAFT_06g017650 [Sorghum bicolor]
Length = 207
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 126/209 (60%), Gaps = 11/209 (5%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
N +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + + GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E+D Y+ + C K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEIDRYANDTVC-KLLVG 120
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PSL 182
NK D R V A A+E G FLE SAK NVE+ F ++ I +L
Sbjct: 121 NKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKDSINVEEAFLAMSAAIKNSKARSQAAL 180
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCCS 211
+ SN+V+ +K +P Q CCS
Sbjct: 181 ERKPSNIVQ---MKGQPIQQEQQKSRCCS 206
>gi|357122771|ref|XP_003563088.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +RVVS E A A E G F+E SAK NVEQ F ++ I + + +N
Sbjct: 123 CDLTDKRVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q CCS
Sbjct: 183 RPATVQIRGQPVEQKT---SCCS 202
>gi|324506590|gb|ADY42810.1| Ras-related protein Rab-1A [Ascaris suum]
Length = 202
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 126/201 (62%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S+R V A + G FLE SAK+ NVEQ F +A +I +++
Sbjct: 123 CDLTSKRAVEYNSAKEYADQLGIPFLETSAKSSTNVEQAFLTMAAEIKNRMGPVQQAGTG 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P N+ GGCC
Sbjct: 183 PSVRIGGSQPVNEK-KTGGCC 202
>gi|440907831|gb|ELR57927.1| Ras-related protein Rab-1A, partial [Bos grunniens mutus]
Length = 246
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 49 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 108
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 109 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 166
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 167 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 226
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 227 EKSNVKIQSTPVKQSG--GGCC 246
>gi|145503838|ref|XP_001437891.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834329|emb|CAI44518.1| rab_B61 [Paramecium tetraurelia]
gi|124405052|emb|CAK70494.1| unnamed protein product [Paramecium tetraurelia]
Length = 211
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT-IGVDFKIKLLTVAGKRLKLT 65
+S YD FK+LLIG SGVGKS +L+ ++ ++ + IGVDFKIK + + K +KL
Sbjct: 5 ESTEYDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQ 64
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQ+RFRT+T SYYRGA GII+VYD+T RE+F ++ +W E+D Y+ +D ++ML
Sbjct: 65 IWDTAGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSVK-MWMSEIDKYA-QEDVIRML 122
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
VGNK D D +R VS EEG ALAK+ F+E SAK N+EQ F +A ++E
Sbjct: 123 VGNKCDMDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 175
>gi|348531422|ref|XP_003453208.1| PREDICTED: ras-related protein Rab-2A-like [Oreochromis niloticus]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 136/220 (61%), Gaps = 28/220 (12%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSP---------PIGGCC 210
+N +K I Q P S GGCC
Sbjct: 175 VFDINNEANGIK--IGPQHPTTNSTLSSNQGGHQAGGGCC 212
>gi|443688647|gb|ELT91272.1| hypothetical protein CAPTEDRAFT_159217 [Capitella teleta]
Length = 206
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 94/199 (47%), Positives = 130/199 (65%), Gaps = 5/199 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELEGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ W + ++ +++N D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIR-TWIRNIEEHASN-DVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + R VS+E+G ALA E+G FLE SAK NVE+ F LA I E
Sbjct: 120 GNKCDMNDRRQVSKEKGEALAVEYGVKFLETSAKASINVEEGFISLARDIKAKMDRKLEA 179
Query: 187 SNVVKRNI--LKQKPENQS 203
SN R LK +P +S
Sbjct: 180 SNPSNRTAHQLKNEPSKKS 198
>gi|432915657|ref|XP_004079196.1| PREDICTED: ras-related protein Rab-2A-like [Oryzias latipes]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 136/220 (61%), Gaps = 28/220 (12%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSP---------PIGGCC 210
+N +K I Q P S GGCC
Sbjct: 175 VFDINNEANGIK--IGPQHPTTNSTLSSSQGGHQAGGGCC 212
>gi|24306110|gb|AAN52527.1|AF454544_2 GTP-binding protein [Ogataea angusta]
gi|24795513|gb|AAN64444.1|AF346820_1 GTP-binding protein [Ogataea angusta]
gi|320583918|gb|EFW98131.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 203
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 126/204 (61%), Gaps = 3/204 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFAEDTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N++ W +E+D Y+T+ +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVNQ-WLQEIDRYATS-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D ++VV A G FLE SA NVEQ F ++ +I + +
Sbjct: 120 GNKCDLTDKKVVDYAVAKEFADSRGIKFLETSASQSTNVEQAFIVMSKQIKSQMANSQPA 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
SN + + + GGCC
Sbjct: 180 SNTAGKPSVNLSGTSVINQQGGCC 203
>gi|410730349|ref|XP_003671354.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
gi|401780172|emb|CCD26111.2| hypothetical protein NDAI_0G03340 [Naumovozyma dairenensis CBS 421]
Length = 207
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 123/180 (68%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S+S YD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 2 SASANGKGYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF+N+ W K V+ ++ N
Sbjct: 59 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQ-WFKTVNEHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ RVV+ E+G +LAKE G F+E SAK +NV + F LA I E
Sbjct: 117 DEAQLLLVGNKSDMDT-RVVTYEQGESLAKELGLPFVESSAKNDDNVNEIFFTLAKLIQE 175
>gi|89027974|gb|ABD59353.1| small GTP binding protein Rab1A [Saccharum officinarum]
Length = 207
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 100/209 (47%), Positives = 127/209 (60%), Gaps = 11/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTIEMEGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD+T E+F N + W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNN-AKQWLSEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PS 181
GNK D R V A A+E G FLE SAK NVE+ F ++ I + +
Sbjct: 120 GNKCDLAESRTVDTSVAQAYAEEIGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
L + SN+V+ +K +P Q CC
Sbjct: 180 LERKPSNIVQ---MKGQPIQQEQQKSRCC 205
>gi|392559791|gb|EIW52975.1| ras-domain-containing protein [Trametes versicolor FP-101664 SS1]
Length = 227
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 121/178 (67%), Gaps = 5/178 (2%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S ++ K+LLIG+S VGKSSLL+ F D+ + TIGVDF++ + V KR+KL+I
Sbjct: 9 SAPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDESNATIGVDFRVHKMEVKSKRVKLSI 68
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGIILVYDV RE+F L W E++ Y ++ VK++V
Sbjct: 69 WDTAGQERFRTITSSYYRGAQGIILVYDVANRESFEALPR-WFSELETYVSSS-VVKIIV 126
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
GNKVD++ R VS EG A A G+LF+E SAKT VE F + +I++ P L +
Sbjct: 127 GNKVDKEYSRQVSTAEGQAFATRMGALFIEASAKTAVGVEDAFRDVVARIIDTPELWQ 184
>gi|146180701|ref|XP_001021320.2| Ras family protein [Tetrahymena thermophila]
gi|146144411|gb|EAS01075.2| Ras family protein [Tetrahymena thermophila SB210]
gi|307777750|dbj|BAJ21271.1| Rab-family small GTPase Rab1A [Tetrahymena thermophila]
Length = 211
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+S VGKSSLL+ F + +D PTIGVDFKI+ + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGNSAVGKSSLLLRFSDNIFNDCFLPTIGVDFKIRTFDIQGKAVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+TSSYY+GA GIILVYD+T ++TF ++ D W E D + N++ +K+LVGNK
Sbjct: 67 AGQERFKTITSSYYKGAHGIILVYDITDKQTFKDI-DNWLAEAD-KNANENVIKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +S+R V+ EEG LA G F+E SA NVE F LA +I
Sbjct: 125 ADLESKRQVTFEEGKELADSLGIKFIETSALNSNNVETAFITLATEI 171
>gi|410930247|ref|XP_003978510.1| PREDICTED: ras-related protein Rab-2A-like [Takifugu rubripes]
Length = 212
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 136/220 (61%), Gaps = 28/220 (12%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSP---------PIGGCC 210
+N +K I Q P S GGCC
Sbjct: 175 VFDINNEANGIK--IGPQHPTTNSTLSGSQGGQHAGGGCC 212
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|432901784|ref|XP_004076945.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oryzias
latipes]
Length = 202
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 8/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A E+ + G+ V
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMA---AEIKKRMGPGATV 179
Query: 190 --VKRNILKQKPENQSPPIGGCC 210
K N+ + P GGCC
Sbjct: 180 GGEKPNVKLTPGTSVKPSSGGCC 202
>gi|219126122|ref|XP_002183313.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405069|gb|EEC45013.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 203
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 99/205 (48%), Positives = 127/205 (61%), Gaps = 11/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEQDQKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDAESFNNVKQ-WLHEIDRYAA-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF----EQLALKIMEVPSLLEE 185
D ++RVVS E+G A G FLE SAKT NVEQ F Q+ ++ PS
Sbjct: 123 SDLTAKRVVSTEQGKEFADSLGIEFLETSAKTSSNVEQAFLTMASQIKARMKTQPSAAGA 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
+ ++ Q+ +N+ GCC
Sbjct: 183 QAGKGGVSLRSQQVKNKE----GCC 203
>gi|225709362|gb|ACO10527.1| Ras-related protein Rab-10 [Caligus rogercresseyi]
Length = 198
Score = 172 bits (436), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 125/177 (70%), Gaps = 3/177 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + GK++KL IWD
Sbjct: 5 SYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFELRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYR A GI+LVYDVT ++F N++ W + + ++ ++ KM++GN
Sbjct: 65 TAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLQNIQEHAA-EEVDKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
K D + +RV+S+E+G A+++E+G FLE SAKT N+E+ F LA I+E +EE
Sbjct: 123 KCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFMDLAESILERTPGVEE 179
>gi|366991981|ref|XP_003675756.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
gi|342301621|emb|CCC69392.1| hypothetical protein NCAS_0C04020 [Naumovozyma castellii CBS 4309]
Length = 210
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 96/180 (53%), Positives = 124/180 (68%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+++G YD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 5 AAAGNGKGYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 61
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF+N+ W K V+ ++ N
Sbjct: 62 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNVKQ-WFKTVNEHA-N 119
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ RVV+ E+G +LAKE G F+E SAK +NV + F LA I E
Sbjct: 120 DEAQLLLVGNKSDMDT-RVVTYEQGESLAKELGLPFIESSAKNDDNVNEIFFTLAKLIQE 178
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 135/210 (64%), Gaps = 14/210 (6%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
S +YD FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + K++KL I
Sbjct: 2 SKAYDYLFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ W + ++ + + D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITAEKSFDNIK-TWIRNIE-QNASSDVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI------MEVP 180
GNK D + +RVVS E+G LA E+G F E SAK++ +VE+ F +A I EV
Sbjct: 120 GNKCDMEDKRVVSTEQGEKLAAEYGVPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVS 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ E +++K + KPE +S GGCC
Sbjct: 180 TPHEHEKDIIKPD---NKPEPKSG--GGCC 204
>gi|66814402|ref|XP_641380.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|134228|sp|P20790.1|RAB8A_DICDI RecName: Full=Ras-related protein Rab-8A; AltName: Full=GTP-binding
protein SAS1
gi|167877|gb|AAA33249.1| GTP-binding protein SAS1 [Dictyostelium discoideum]
gi|60469254|gb|EAL67248.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 208
Score = 172 bits (435), Expect = 9e-41, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 132/202 (65%), Gaps = 17/202 (8%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
++ +S +YD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + + G
Sbjct: 5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELEG 61
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ ++T+
Sbjct: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS 120
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-- 177
KML+GNK D ++VV G +LA E+G FLE SAK NVE+ F LA I
Sbjct: 121 -VNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
Query: 178 ------EVPSLLEEGSNVVKRN 193
E P +++ G+N+ N
Sbjct: 180 MIDTPNEQPQVVQPGTNLGANN 201
>gi|223997470|ref|XP_002288408.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|223998436|ref|XP_002288891.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
gi|220975516|gb|EED93844.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220975999|gb|EED94327.1| rab-type small GTPase [Thalassiosira pseudonana CCMP1335]
Length = 181
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/171 (54%), Positives = 120/171 (70%), Gaps = 9/171 (5%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKRL 62
Q+ YD+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + V GKR+
Sbjct: 3 QAAPYDMQIKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNVEVDGKRI 59
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ +
Sbjct: 60 KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-DVHVN 117
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
K+LVGNK D E+VVS EEG LAKE G F ECSAK NVEQ F +A
Sbjct: 118 KILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFFECSAKNDINVEQSFLGIA 168
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 86/176 (48%), Positives = 121/176 (68%), Gaps = 6/176 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII VYDVT + +F +++ W +++D Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSNVC-KLLIGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF----EQLALKIMEVPS 181
+D RVVS EE +A+++ ++E SAKT NVE+ F + L ++ + PS
Sbjct: 123 IDLAENRVVSTEEAKHVAEQNNMNYIEASAKTDSNVEKAFITIAKALKDRVTQYPS 178
>gi|346467487|gb|AEO33588.1| hypothetical protein [Amblyomma maculatum]
Length = 228
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/175 (52%), Positives = 117/175 (66%), Gaps = 3/175 (1%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
+S + YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK
Sbjct: 34 NSPAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKT 93
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y++ ++
Sbjct: 94 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENV 151
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
K+LVGNK D + +VVS E G A A E G F+E SAK NV F +A I
Sbjct: 152 NKLLVGNKCDLTANKVVSYETGKAFADEIGIPFMETSAKNATNVXHAFMAMAADI 206
>gi|440911147|gb|ELR60860.1| Ras-related protein Rab-18, partial [Bos grunniens mutus]
Length = 174
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 93/178 (52%), Positives = 118/178 (66%), Gaps = 7/178 (3%)
Query: 34 FISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILV 92
F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQERFRTLT SYYRGAQG+ILV
Sbjct: 2 FTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILV 61
Query: 93 YDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGS 152
YDVTRR+TF L D W E++ Y T D V MLVGNK+D+++ V R EG+ A++H
Sbjct: 62 YDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDKENHE-VDRNEGLKFARKHSM 119
Query: 153 LFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
LF+E SAKT + V+ FE+L KI++ P L E N K L + E Q GG C
Sbjct: 120 LFIEESAKTCDGVQCAFEELVEKIIQTPGLW-ESENQNKGVKLTHREEGQG---GGAC 173
>gi|55742328|ref|NP_001007162.1| ras-related protein Rab-1A [Danio rerio]
gi|29571131|gb|AAH50239.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|38541759|gb|AAH62857.1| RAB1A, member RAS oncogene family [Danio rerio]
gi|182889992|gb|AAI65910.1| Rab1a protein [Danio rerio]
Length = 201
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+K + P GGCC
Sbjct: 183 ----EKTMKIESTPVKPASGGCC 201
>gi|260834761|ref|XP_002612378.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
gi|229297755|gb|EEN68387.1| hypothetical protein BRAFLDRAFT_58617 [Branchiostoma floridae]
Length = 214
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|75077202|sp|Q4R8X3.1|RAB1B_MACFA RecName: Full=Ras-related protein Rab-1B
gi|67967932|dbj|BAE00448.1| unnamed protein product [Macaca fascicularis]
Length = 201
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT RE++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPAGGGCC 201
>gi|417398094|gb|JAA46080.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 267
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|241999568|ref|XP_002434427.1| RAS-related protein, putative [Ixodes scapularis]
gi|215497757|gb|EEC07251.1| RAS-related protein, putative [Ixodes scapularis]
gi|442750147|gb|JAA67233.1| Putative gtpase rab2 small g protein superfamily [Ixodes ricinus]
Length = 212
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|224284454|gb|ACN39961.1| unknown [Picea sitchensis]
gi|224284508|gb|ACN39987.1| unknown [Picea sitchensis]
Length = 216
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/219 (45%), Positives = 133/219 (60%), Gaps = 12/219 (5%)
Query: 1 MGSSSGQSNS-YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVA 58
M +++G++ + YD K+LLIGDSGVGKS LL+ F S TIG+DFKI++ +
Sbjct: 1 MAAATGRARADYDYLVKLLLIGDSGVGKSCLLLRFTDDSFTTSFITTIGIDFKIRIFELD 60
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKR+KL IWDTAGQERFRT+T++YYR A GI+LVYDVT +F N+ + W K ++ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRNAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD 119
Query: 119 QDCVKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+ K+LVGNK D D S+R VS G LA E+G F E SAKT NVEQ F +A IM
Sbjct: 120 -NVNKILVGNKADMDESKRAVSTARGQELADEYGIKFFETSAKTNINVEQAFFSIAKDIM 178
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGG-----CCS 211
+ L E + I P P CCS
Sbjct: 179 K--RLSETDFRPAPQTITINNPNTAEGPASASSKSRCCS 215
>gi|383852551|ref|XP_003701790.1| PREDICTED: ras-related protein Rab-18-like [Megachile rotundata]
Length = 219
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 120/176 (68%), Gaps = 3/176 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
++ K+L+IG+S VGKSS+++ F +++ T+G+D+K K +T+ G +KL IWD
Sbjct: 2 TFYFVLKLLMIGESNVGKSSIILRFTEDEFYENMQSTVGMDYKTKQITIDGNMVKLAIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRTLT SYYR QG ILVYDVT R TF L + W E++ Y D VKM+VGN
Sbjct: 62 TAGQERFRTLTPSYYRDGQGAILVYDVTDRVTFVKL-ETWLNELNTYCNKTDIVKMVVGN 120
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
K+D + R VS EEG+ A+ H +L++E SAKT + ++ CFE+L KI++ P L +
Sbjct: 121 KIDLPN-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWD 175
>gi|303272717|ref|XP_003055720.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226463694|gb|EEH60972.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 204
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLEGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV + A A E G FLE SAK NVE+ F ++A +I
Sbjct: 123 SDLTAKKVVDYQTAKAFADEIGIPFLETSAKNATNVEEAFMKMAGEI 169
>gi|343172836|gb|AEL99121.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +K
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTIELEGKSVKYRF 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEINRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D RVV + G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELGIPFLETSAKDAVNVEKAFLTMAGEI 169
>gi|330797350|ref|XP_003286724.1| Rab GTPase [Dictyostelium purpureum]
gi|325083322|gb|EGC36778.1| Rab GTPase [Dictyostelium purpureum]
Length = 205
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FKILLIGDSGVGKS LL+ F S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYD T +++F N+ W E++ Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFNNVKQ-WMGEIERYAC-ENVNKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +E+VV + + A+ G F+E SAK NVE+CF +A I
Sbjct: 125 TDLVNEKVVDSNQAKSFAESMGIPFIETSAKNATNVEECFISMARDI 171
>gi|116779261|gb|ABK21206.1| unknown [Picea sitchensis]
gi|224284661|gb|ACN40063.1| unknown [Picea sitchensis]
Length = 202
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 100/206 (48%), Positives = 130/206 (63%), Gaps = 13/206 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSLLEE 185
D +++VV + A A E G FLE SAK NVE F +A +I P++
Sbjct: 123 NDLTAKKVVDYQTAKAFADEIGIPFLETSAKNAINVEDAFMTMAAEIKNRMASQPAMNST 182
Query: 186 GSNVVKRNILKQKPENQSPPIGGCCS 211
V+ +K +P P GCCS
Sbjct: 183 RPTTVQ---MKGQP---VVPKSGCCS 202
>gi|116786670|gb|ABK24196.1| unknown [Picea sitchensis]
Length = 213
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 120/180 (66%), Gaps = 10/180 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K +KL I
Sbjct: 2 SYAYLFKYIVIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIGNKPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLA-TWLEDARQHA-NSNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D D R VS EEG AKEHG +F+E SAKT +NVE+ F A KI + +EEG
Sbjct: 118 GNKCDLDHRRAVSTEEGAQFAKEHGLVFMETSAKTAQNVEEAFINTAAKIYQK---IEEG 174
>gi|358253006|dbj|GAA51290.1| Ras-related protein Rab-18 [Clonorchis sinensis]
Length = 215
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 124/177 (70%), Gaps = 4/177 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVA-GKRLKLTIWDTA 70
++FK+L+IGDSGVGKSSLL+ +I+ S + +S TIGVD+++K+ TV G +KL+IWDTA
Sbjct: 15 VNFKLLVIGDSGVGKSSLLLRYINDSFEARVSATIGVDYRVKVTTVPDGTMIKLSIWDTA 74
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLT ++YRGA G I+VYDV+ R +F LS+ W +E+ +S++ D V+MLVGNK+
Sbjct: 75 GQERFRTLTPNFYRGAHGAIIVYDVSNRGSFDRLSN-WMEELKTFSSHHDMVRMLVGNKI 133
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
D R V+REEG+ A+ + E SAKT E V F L +I +P L + S
Sbjct: 134 DH-IPRQVTREEGLRYARMFNMPYAETSAKTSEGVNSVFSDLVQRIYTIPHLWDPDS 189
>gi|357122765|ref|XP_003563085.1| PREDICTED: GTP-binding protein YPTM2-like [Brachypodium distachyon]
Length = 203
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VVS E A A E G F+E SAK NVEQ F ++ I + + +N
Sbjct: 123 SDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q CCS
Sbjct: 183 RPATVQIRGQPVEQK---ASCCS 202
>gi|260804583|ref|XP_002597167.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
gi|229282430|gb|EEN53179.1| hypothetical protein BRAFLDRAFT_276199 [Branchiostoma floridae]
Length = 204
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 131/204 (64%), Gaps = 11/204 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG--S 187
D +++VV A + FLE SAK NVEQ F +A E+ + + G +
Sbjct: 126 SDLTTKKVVDYTTAKEFADQLHIPFLETSAKNATNVEQAFMTMA---AEIKNRMGPGAVT 182
Query: 188 NVVKRNI-LKQKPENQSPPIGGCC 210
N K+N+ ++ P QS GGCC
Sbjct: 183 NETKQNVKIQSTPVKQSG--GGCC 204
>gi|74834459|emb|CAI44552.1| rab_A61 [Paramecium tetraurelia]
Length = 211
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 121/173 (69%), Gaps = 3/173 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT-IGVDFKIKLLTVAGKRLKLT 65
+S YD FK+LLIG SGVGKS +L+ ++ ++ + IGVDFKIK + + K +KL
Sbjct: 5 ESTEYDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQ 64
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQ+RFRT+T SYYRGA GII+VYD+T RE+F ++ +W E+D Y+ +D ++ML
Sbjct: 65 IWDTAGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSVK-MWMSEIDKYA-QEDVIRML 122
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
VGNK D D +R VS EEG ALAK+ F+E SAK N+EQ F +A ++E
Sbjct: 123 VGNKCDVDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 175
>gi|410900346|ref|XP_003963657.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Takifugu
rubripes]
gi|312987462|gb|ADR31264.1| Rab1 [Sciaenops ocellatus]
Length = 203
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 123/201 (61%), Gaps = 3/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGG 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
K N+ P GGCC
Sbjct: 183 EKPNVKLTPGTTVKPSSGGCC 203
>gi|313228144|emb|CBY23294.1| unnamed protein product [Oikopleura dioica]
Length = 211
Score = 172 bits (435), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/217 (45%), Positives = 136/217 (62%), Gaps = 23/217 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W + +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLDDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V REEG A A+EHG +F+E SAKT VE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKREEGEAFAREHGLVFMETSAKTAAGVEEAFINTAREIYEK---IQEG 174
Query: 187 SNVVKR--NILKQKPENQSPP-----------IGGCC 210
+ + N +K P++QS GGCC
Sbjct: 175 AFDINNEANGIKLGPQHQSGAGMPNSRGQQNQGGGCC 211
>gi|115471321|ref|NP_001059259.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|33146687|dbj|BAC80082.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|50510010|dbj|BAD30623.1| putative ethylene-responsive small GTP-binding protein [Oryza
sativa Japonica Group]
gi|113610795|dbj|BAF21173.1| Os07g0239400 [Oryza sativa Japonica Group]
gi|215696996|dbj|BAG90990.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222636727|gb|EEE66859.1| hypothetical protein OsJ_23656 [Oryza sativa Japonica Group]
Length = 215
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 128/206 (62%), Gaps = 10/206 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLAETDSK 187
Query: 189 VVKRNILKQKPENQSPPI----GGCC 210
R I KPE + CC
Sbjct: 188 TEDRTIKINKPEGDAEATTLQKSACC 213
>gi|412986893|emb|CCO15319.1| predicted protein [Bathycoccus prasinos]
Length = 204
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLFRFADDTYQESYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVK-TWLSEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S++VV A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 SDLTSKKVVDYATAKAFADEIGIPFMETSAKNATNVEQAFVTMANEI 169
>gi|218199351|gb|EEC81778.1| hypothetical protein OsI_25471 [Oryza sativa Indica Group]
Length = 215
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 128/206 (62%), Gaps = 10/206 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLAETDSK 187
Query: 189 VVKRNILKQKPENQSPPI----GGCC 210
R I KPE + CC
Sbjct: 188 TEDRTIKINKPEGDAEATTSQKSACC 213
>gi|119620329|gb|EAW99923.1| RAB1A, member RAS oncogene family, isoform CRA_f [Homo sapiens]
Length = 257
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 60 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 177
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 178 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 237
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 238 EKSNVKIQSTPVKQSG--GGCC 257
>gi|390598341|gb|EIN07739.1| GTP-binding protein ypt1 [Punctularia strigosozonata HHB-11173 SS5]
Length = 204
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D S++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTSKKVVEYSVAKDFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTST 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
S K + + Q GGCC
Sbjct: 180 ASGPGKTSTVTPGQSVQQQASGGCC 204
>gi|348688677|gb|EGZ28491.1| hypothetical protein PHYSODRAFT_353544 [Phytophthora sojae]
Length = 202
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 136/209 (65%), Gaps = 15/209 (7%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKRL 62
N +D+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + + K++
Sbjct: 4 HENPFDMQIKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNIELDNKKV 60
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ +
Sbjct: 61 KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA-DVHVN 118
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
K+L+GNK D ++VVS EEG ALA E+G F E SAK NVE F ++A ++ L
Sbjct: 119 KILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKN--RL 176
Query: 183 LEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
+EEG K ++ L KP +P GCC
Sbjct: 177 MEEGGPHKKDSVNLNAKP---APVKKGCC 202
>gi|328871755|gb|EGG20125.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 212
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 123/178 (69%), Gaps = 9/178 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
++S +S +YD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + +
Sbjct: 7 TASNKSAAYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELE 63
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ ++T
Sbjct: 64 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHAT- 121
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+ KML+GNK D ++VV G ALA E+G FLE SAK NVE+ F LA I
Sbjct: 122 ESVNKMLIGNKCDLPEKKVVDSSRGKALADEYGIKFLETSAKNSINVEEAFISLAKDI 179
>gi|223649310|gb|ACN11413.1| Ras-related protein Rab-1A [Salmo salar]
Length = 202
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 8/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK+ NVEQ F +A +I + P G+
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKSATNVEQAFMTMAAEIKKRMGPGATTGGN 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
K N+ K + P GGCC
Sbjct: 183 E--KSNV-KIQSTPVKPASGGCC 202
>gi|217841|dbj|BAA00832.1| small GTP-binding protein [Arabidopsis thaliana]
Length = 195
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/199 (49%), Positives = 124/199 (62%), Gaps = 7/199 (3%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQE 60
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNKSDLT 118
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRN 193
R + E A A E G F+E SAK NVEQ F ++ I E + G+N
Sbjct: 119 ENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNARPPT 178
Query: 194 I-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 179 VQIRGQPVAQK---NGCCS 194
>gi|290462541|gb|ADD24318.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
gi|290562327|gb|ADD38560.1| Ras-related protein Rab-10 [Lepeophtheirus salmonis]
Length = 198
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/177 (49%), Positives = 126/177 (71%), Gaps = 3/177 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
SYDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + GK++KL IWD
Sbjct: 5 SYDLLFKLLLIGDSGVGKTCILFRFSEDTFNTTFISTIGIDFKIKTFDLRGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYR A GI+LVYDVT ++F N++ W + + ++ ++ KM++GN
Sbjct: 65 TAGQERFHTITTSYYRNAMGIMLVYDVTNPKSFDNIAK-WLRNIQEHAA-EEVDKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
K D + +RV+S+E+G A+++E+G FLE SAKT N+E+ F +LA I++ +EE
Sbjct: 123 KCDMEDKRVISKEKGEAISREYGIRFLETSAKTNVNIERAFIELAESILDRTPGIEE 179
>gi|225452278|ref|XP_002270701.1| PREDICTED: ras-related protein RABB1b [Vitis vinifera]
gi|296087576|emb|CBI34832.3| unnamed protein product [Vitis vinifera]
Length = 209
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/212 (46%), Positives = 132/212 (62%), Gaps = 14/212 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-----VPS 181
GNK D R VS+EEG AKE+G LFLE SA+T +NVE+ F + A +I++ V
Sbjct: 118 GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAARILQNIQEGVFD 177
Query: 182 LLEEGSNVVKRNILKQKPENQS--PPIGGCCS 211
L E S + Q P GGCC+
Sbjct: 178 LSNESSGIKVGYGRPQGPSGDGTVSQRGGCCN 209
>gi|353244337|emb|CCA75747.1| related to YPT-1 GTP-binding protein ypt1 [Piriformospora indica
DSM 11827]
Length = 227
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 25 HASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 84
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 85 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDTDTFTNVKQ-WLQEIDRYAS-EGVNKLL 142
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D S++VV A + G FLE SAK NVEQ F +A +I +
Sbjct: 143 VGNKSDLTSKKVVEYTVAKEFADQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGASGT 202
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
G K N + + GCC
Sbjct: 203 GGPTSKTNTITPGTGITTNTSSGCC 227
>gi|340380157|ref|XP_003388590.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
gi|340386342|ref|XP_003391667.1| PREDICTED: ras-related protein Rab-8A-like [Amphimedon
queenslandica]
Length = 205
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +LV F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVDIEGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFDNIRN-WIRNIE-ENAAADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + RVVSRE G LA+EH F+E SAK+ +NVE F LA I
Sbjct: 120 GNKCDLEESRVVSRERGQLLAEEHQVKFMETSAKSGQNVETAFLNLAKDI 169
>gi|82541361|ref|XP_724926.1| GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23479748|gb|EAA16491.1| putative GTPase [Plasmodium yoelii yoelii]
Length = 225
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 103/216 (47%), Positives = 131/216 (60%), Gaps = 22/216 (10%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFI---------------SSSVDDLSPTIGVDFKIKLL 55
+D FKILLIGDSGVGKS LL+ F + D TIGVDFKIK +
Sbjct: 16 FDSLFKILLIGDSGVGKSCLLLRFAGLLKLFYKLRNNDTDDTYTDSYISTIGVDFKIKTI 75
Query: 56 TVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLY 115
+ K +KL IWDTAGQERFRT+TSSYYRGAQGII+VYDVT R++F N+ + W E++ Y
Sbjct: 76 EIDDKIIKLQIWDTAGQERFRTITSSYYRGAQGIIIVYDVTDRDSFNNVKN-WIIEIEKY 134
Query: 116 STNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALK 175
++ +D K+L+GNK+D ++R VS EEG LA+ FLE SAK NVEQ F+ +A +
Sbjct: 135 AS-EDVQKILIGNKIDLKNDRSVSYEEGKELAESCNIQFLETSAKISHNVEQAFKTMAYE 193
Query: 176 IMEVPSLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
I L E + NI L KP + CC
Sbjct: 194 IKNKSQL--ENQQKGRANINLNAKPIKDNKK--KCC 225
>gi|357123970|ref|XP_003563680.1| PREDICTED: ras-related protein RABE1c-like [Brachypodium
distachyon]
Length = 214
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 11/206 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A ++ L E +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGITFFETSAKTNLNVEQVFFSIA---RDIKQRLSESDS 186
Query: 189 VVKRNILKQKPENQSPPIG----GCC 210
+ +K KPE ++ G CC
Sbjct: 187 KPEGGTIKIKPEGEADAAGAQKSACC 212
>gi|326433258|gb|EGD78828.1| Rab1/RabD-family small GTPase [Salpingoeca sp. ATCC 50818]
Length = 203
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 128/204 (62%), Gaps = 8/204 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKDSFENVKQ-WLQEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++ V A G FLE SAK NVEQ F +A +I P++ G+
Sbjct: 123 SDLAAKKQVDYTTAKEFADSIGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPTMASGGA 182
Query: 188 NVVKRNILKQKPENQSPPIGGCCS 211
+K KP + S GGCCS
Sbjct: 183 KKKDTLDIKAKPASSS---GGCCS 203
>gi|52345478|ref|NP_001004787.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|148230336|ref|NP_001080138.1| RAB1A, member RAS oncogene family [Xenopus laevis]
gi|27924279|gb|AAH45014.1| Rab1-prov protein [Xenopus laevis]
gi|49250530|gb|AAH74522.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117557991|gb|AAI27357.1| RAB1A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 204
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/207 (47%), Positives = 127/207 (61%), Gaps = 5/207 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
K ++ P QS GGCC
Sbjct: 180 ATAGGQEKNVKIQSTPVKQSS--GGCC 204
>gi|464524|sp|Q05974.1|RAB1A_LYMST RecName: Full=Ras-related protein Rab-1A
gi|288934|emb|CAA51233.1| RAB1 [Lymnaea stagnalis]
Length = 205
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 18/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A + G FLE SAK NVEQ F +A +I + S+
Sbjct: 126 SDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASD- 184
Query: 190 VKRNILKQKPE---NQSPPI----GGCC 210
KP N S P+ GGCC
Sbjct: 185 -------SKPSVKINSSTPVSANKGGCC 205
>gi|345322815|ref|XP_003430635.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Ornithorhynchus anatinus]
Length = 200
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGD GVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDXGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +AKEHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVLKTKGEQIAKEHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|405969917|gb|EKC34860.1| Ras-related protein Rab-1A [Crassostrea gigas]
Length = 205
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 127/202 (62%), Gaps = 8/202 (3%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F+N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFSNVKQ-WLQEIDRYAS-ENVNKLLVGNKS 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGSN 188
D ++++VV A + G FLE SAK NVEQ F +A +I P + N
Sbjct: 127 DMETKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVISASPDN 186
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
I P QS GGCC
Sbjct: 187 KPSVKINASNPVKQS---GGCC 205
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 97/181 (53%), Positives = 125/181 (69%), Gaps = 11/181 (6%)
Query: 3 SSSGQSN-SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTV 57
S++G +N +YD KILL+GDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 8 SANGSTNKNYDSVMKILLLGDSGVGKSCLLVRFVE---DKFTPTFITTIGIDFKIKTVDI 64
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
GKR+KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT TF N+ W V+ +++
Sbjct: 65 NGKRVKLQLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQ-WFSTVNQHAS 123
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+D V +LVGNK D D+ R VS E+G ALAKE G F+E SAK NV + F LA I
Sbjct: 124 -EDVVMLLVGNKKDMDT-RTVSYEQGEALAKELGIPFIEASAKDDTNVSEIFFTLAKLIQ 181
Query: 178 E 178
E
Sbjct: 182 E 182
>gi|1588651|prf||2209256A rab2 gene
Length = 220
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|327260900|ref|XP_003215271.1| PREDICTED: ras-related protein Rab-1A-like [Anolis carolinensis]
Length = 203
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 128/205 (62%), Gaps = 6/205 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL I
Sbjct: 3 AQQHDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LV
Sbjct: 63 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 121 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATA 180
Query: 187 SNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 181 GGAEKSNVKIQSTPVKQSS--GGCC 203
>gi|427777947|gb|JAA54425.1| Putative rab8a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 209
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+S+L F + D TIG+DFKI+++ + GK++KL I
Sbjct: 2 AKSYDFLFKLLLIGDSGVGKTSILFRFSDNKFDGSFISTIGIDFKIRIIEIDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT+ TF N+ W + D ++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTKEATFENIK-TWIRNTDEHAA-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
GNK D + R VS+E G LA EH F+E SA + NVE+ F LA
Sbjct: 120 GNKCDMNELRQVSKERGEKLAIEHNIKFMETSAVSSINVEEAFYTLA 166
>gi|367461227|gb|AEX14567.1| small GTP-binding protein [Dunaliella salina]
Length = 203
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVDLDGKVVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS YYRGA GII+VYDVT E+F N+ W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSGYYRGAHGIIVVYDVTDMESFNNVK-TWLNEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S+R V + A A E G FLE SAK+ NVEQ F +A +I
Sbjct: 123 NDLTSKRAVDYQTAKAFADEIGIPFLETSAKSSTNVEQAFMTMAAEI 169
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK ++E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANVSIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|126697336|gb|ABO26625.1| Ras-related protein Rab-1A [Haliotis discus discus]
Length = 205
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 18/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A + G FLE SAK NVEQ F +A +I + S
Sbjct: 126 CDLTTKKVVDYTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPVTAAS-- 183
Query: 190 VKRNILKQKPE---NQSPPI----GGCC 210
+ KP N S P+ GGCC
Sbjct: 184 ------ENKPSVKINSSTPVKQGGGGCC 205
>gi|301613321|ref|XP_002936157.1| PREDICTED: ras-related protein Rab-2A [Xenopus (Silurana)
tropicalis]
Length = 211
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 132/200 (66%), Gaps = 12/200 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
NK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 ANKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEG 174
Query: 187 SNVVKR--NILKQKPENQSP 204
+ N +K P++ +P
Sbjct: 175 VFDINNEANGIKIGPQHSTP 194
>gi|402595096|gb|EJW89022.1| rab family protein 8 [Wuchereria bancrofti]
Length = 209
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 134/208 (64%), Gaps = 6/208 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMII 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA--LKIMEVPSLLE 184
GNK D + R VSRE G LA E+G+ F+E SAK NVE+ F LA +K+ + E
Sbjct: 120 GNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQE 179
Query: 185 EGSNVVKRNILKQKPENQSPPIGGC-CS 211
+ R + Q P S G CS
Sbjct: 180 NTTQNTGRITVHQTPRKSSSLFSGWRCS 207
>gi|156381354|ref|XP_001632230.1| predicted protein [Nematostella vectensis]
gi|156219283|gb|EDO40167.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 127/205 (61%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSLLEE 185
D +++VV A+ G FLE SAK NVEQ F +A +I P+
Sbjct: 126 CDLTTKKVVDFTTAKEYAESLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPSPAPQGA 185
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
GSNV I P Q GGCC
Sbjct: 186 GSNV---KINSSTPVKQGG--GGCC 205
>gi|550062|gb|AAA60241.1| GTP-binding protein [Homo sapiens]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLMFMETSAKTASNVEEAFINTAKEIYE 169
>gi|10946940|ref|NP_067493.1| ras-related protein Rab-2A [Mus musculus]
gi|1709998|sp|P53994.1|RAB2A_MOUSE RecName: Full=Ras-related protein Rab-2A
gi|1177547|emb|CAA64684.1| GTP-binding protein [Mus musculus]
gi|26347751|dbj|BAC37524.1| unnamed protein product [Mus musculus]
gi|74137386|dbj|BAE35742.1| unnamed protein product [Mus musculus]
gi|74183144|dbj|BAE22525.1| unnamed protein product [Mus musculus]
gi|74194509|dbj|BAE37298.1| unnamed protein product [Mus musculus]
gi|74198093|dbj|BAE35226.1| unnamed protein product [Mus musculus]
gi|74211806|dbj|BAE29254.1| unnamed protein product [Mus musculus]
gi|74222313|dbj|BAE26957.1| unnamed protein product [Mus musculus]
gi|112292939|dbj|BAF02847.1| Rab2A [Mus musculus]
gi|148673733|gb|EDL05680.1| RAB2, member RAS oncogene family [Mus musculus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|345306838|ref|XP_001513461.2| PREDICTED: ras-related protein Rab-2A-like [Ornithorhynchus
anatinus]
Length = 212
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|193615541|ref|XP_001951463.1| PREDICTED: ras-related protein Rab-10-like [Acyrthosiphon pisum]
Length = 200
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 117/169 (69%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCILFRFSDDAFTTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+ W + ++ ++ N+D KM++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNEKSFENIVK-WLRNINEHA-NEDVEKMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D D +RVV + G +A+EH FLE SAK N+E+ F L L I+
Sbjct: 123 KCDMDDKRVVGKSRGEGIAREHNISFLETSAKANINIEKAFTDLTLSIL 171
>gi|407038223|gb|EKE39000.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 187
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 123/193 (63%), Gaps = 7/193 (3%)
Query: 19 LIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRT 77
+IGDSGVGKS LL+ F D TIGVDFKIK L + G+ +KL IWDTAGQERFRT
Sbjct: 1 MIGDSGVGKSCLLLRFSDDVFSDTYITTIGVDFKIKTLKINGRDIKLQIWDTAGQERFRT 60
Query: 78 LTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERV 137
+TSSYYRGA GII+VYDVT ++F ++ W E++ + + + VKML+GNK D+D+ +
Sbjct: 61 ITSSYYRGAHGIIVVYDVTDVQSFNHIRQ-WLNEIE-GNASPNVVKMLIGNKADKDATKA 118
Query: 138 VSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQ 197
VS E+ AK+ G F E SAK NVE F +LA ++ + ++E V N+
Sbjct: 119 VSTEQAAEFAKQEGMKFFETSAKQSINVEAAFLELA---QDIKNQMKETPRVTPDNVAI- 174
Query: 198 KPENQSPPIGGCC 210
KPE Q P GCC
Sbjct: 175 KPEVQQEPQPGCC 187
>gi|343172838|gb|AEL99122.1| Ras-like protein, partial [Silene latifolia]
Length = 196
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/170 (55%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + GK +K
Sbjct: 2 SNEYDFLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTTELEGKSVKYRF 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E++ Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEINRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D RVV + G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 120 GNKCDLVENRVVDTQMGQALADELGIPFLETSAKDAVNVEKAFLTMAGEI 169
>gi|255710579|ref|XP_002551573.1| KLTH0A02662p [Lachancea thermotolerans]
gi|238932950|emb|CAR21131.1| KLTH0A02662p [Lachancea thermotolerans CBS 6340]
Length = 213
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/180 (54%), Positives = 121/180 (67%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
SSS + SYD KILL+GDSGVGKS LLV F+ D SP TIG+DFKIK + +
Sbjct: 9 SSSANAKSYDSIMKILLVGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF+N+ W V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFSNIKQ-WFSTVNQHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ R VS ++G ALAKE G F+E SAK NV F LA I E
Sbjct: 124 DEAQLLLVGNKSDMDT-RAVSTDQGEALAKELGIPFVEASAKDDTNVNDIFFLLAKLIQE 182
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/175 (53%), Positives = 121/175 (69%), Gaps = 9/175 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ + + GKR+K
Sbjct: 7 SRAYDSILKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIEIDGKRIK 63
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ + W + V ++ N+D
Sbjct: 64 LQVWDTAGQERFRTITTAYYRGATGIILVYDVTDERTFENVRN-WFQTVHQHA-NEDTQL 121
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+LVGNK D R VS E G +LA+E G FLE SAKT +NV++ F +LA I E
Sbjct: 122 ILVGNKNDEKDLRAVSSERGESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQE 176
>gi|74185239|dbj|BAE30098.1| unnamed protein product [Mus musculus]
Length = 205
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAG+ERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGEERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|392588635|gb|EIW77967.1| ras-domain-containing protein [Coniophora puteana RWD-64-598 SS2]
Length = 229
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 123/182 (67%), Gaps = 5/182 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGK 60
+S S ++ K+LLIG++ VGKSSLL+ F D+ + TIGVDF++ + V G+
Sbjct: 8 ASKSSAPAPVNVKLLLIGNASVGKSSLLLRFSDEQWLPEDEATATIGVDFRVHKMEVNGR 67
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL+IWDTAGQERFRT+TSSYYRGAQGIILVYDV+ RETF L W E++ Y +
Sbjct: 68 KVKLSIWDTAGQERFRTITSSYYRGAQGIILVYDVSNRETFEALPR-WFSEIETY-VSPT 125
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
V+++VGNK+D+++ R V EG A A+ +LFLE SAKT V + FE + I++ P
Sbjct: 126 VVRIIVGNKLDKENSRQVPTSEGAAFAERQDALFLEASAKTAVGVRETFEDVVRHILDTP 185
Query: 181 SL 182
L
Sbjct: 186 EL 187
>gi|399163137|gb|AFP33144.1| rab-1, partial [Caenorhabditis elegans]
Length = 204
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +ETF N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++R V + A + G FLE SAK+ NVEQ F +A +I ++
Sbjct: 125 CDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGA 184
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P Q GGCC
Sbjct: 185 PGVRITGSQPV-QDKKSGGCC 204
>gi|410077757|ref|XP_003956460.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
gi|372463044|emb|CCF57325.1| hypothetical protein KAFR_0C03330 [Kazachstania africana CBS 2517]
Length = 210
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/175 (56%), Positives = 119/175 (68%), Gaps = 10/175 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S+S +YD KILLIGDSGVGKS LLV F+ D SP TIG+DFKIK + +
Sbjct: 5 SASATGKNYDSIMKILLIGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKTVEIN 61
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT +TF N++ W K V ++ N
Sbjct: 62 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANINK-WFKTVTEHA-N 119
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
D +LVGNK D D+ RVVS E+G LAKE G F+E SAK NV F LA
Sbjct: 120 DDAQLLLVGNKNDMDT-RVVSCEQGEVLAKELGLPFVESSAKDNNNVSDIFLSLA 173
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK ++E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANISIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|17558550|ref|NP_503397.1| Protein RAB-1 [Caenorhabditis elegans]
gi|351059221|emb|CCD67094.1| Protein RAB-1 [Caenorhabditis elegans]
Length = 205
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 125/201 (62%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +ETF N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++R V + A + G FLE SAK+ NVEQ F +A +I ++
Sbjct: 126 CDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGA 185
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P Q GGCC
Sbjct: 186 PGVRITGSQPV-QDKKSGGCC 205
>gi|49065350|emb|CAG38493.1| RAB1B [Homo sapiens]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 127/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + ++ TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTENYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPAGGGCC 201
>gi|395859792|ref|XP_003802215.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Otolemur
garnettii]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 134/207 (64%), Gaps = 12/207 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYEK---IQEG 174
Query: 187 SNVVKR--NILKQKPENQSPPIGGCCS 211
+ N +K P++ + C+
Sbjct: 175 VFDINNEANGIKIGPQHAATNATHACN 201
>gi|1370164|emb|CAA98159.1| RAB1B [Lotus japonicus]
Length = 194
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 120/209 (57%), Gaps = 28/209 (13%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + K +KL IWDTAGQE
Sbjct: 1 FKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDTAGQE 60
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK D
Sbjct: 61 RFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNKSDLT 118
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRN 193
+ R VS E A A E G F+E SAK NVEQ F +A I K
Sbjct: 119 ANRAVSYETAKAFADEIGIPFMETSAKDATNVEQAFMAMAASI--------------KNR 164
Query: 194 ILKQKPENQSPPI-----------GGCCS 211
+ Q N PP GCCS
Sbjct: 165 MASQPANNARPPTVNISGKPVGQSSGCCS 193
>gi|34849826|gb|AAH58382.1| RAB2A, member RAS oncogene family [Mus musculus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEKAFINTAKEIYE 169
>gi|41393075|ref|NP_958862.1| ras-related protein Rab-2A [Danio rerio]
gi|27881912|gb|AAH44459.1| RAB2A, member RAS oncogene family [Danio rerio]
gi|182891762|gb|AAI65141.1| Rab2a protein [Danio rerio]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|4506365|ref|NP_002856.1| ras-related protein Rab-2A isoform a [Homo sapiens]
gi|50979323|ref|NP_001003318.1| ras-related protein Rab-2A [Canis lupus familiaris]
gi|197098732|ref|NP_001126581.1| ras-related protein Rab-2A [Pongo abelii]
gi|302564413|ref|NP_001180789.1| ras-related protein Rab-2A [Macaca mulatta]
gi|350535689|ref|NP_001233386.1| ras-related protein Rab-2A [Pan troglodytes]
gi|296226560|ref|XP_002758983.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Callithrix
jacchus]
gi|301759885|ref|XP_002915755.1| PREDICTED: ras-related protein Rab-2A-like [Ailuropoda melanoleuca]
gi|332213898|ref|XP_003256067.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Nomascus
leucogenys]
gi|390475645|ref|XP_003734991.1| PREDICTED: ras-related protein Rab-2A isoform 2 [Callithrix
jacchus]
gi|402878329|ref|XP_003902845.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Papio anubis]
gi|403288788|ref|XP_003935569.1| PREDICTED: ras-related protein Rab-2A [Saimiri boliviensis
boliviensis]
gi|46577636|sp|P61019.1|RAB2A_HUMAN RecName: Full=Ras-related protein Rab-2A
gi|46577642|sp|P61105.1|RAB2A_CANFA RecName: Full=Ras-related protein Rab-2A
gi|75070519|sp|Q5R6B6.1|RAB2A_PONAB RecName: Full=Ras-related protein Rab-2A
gi|75075847|sp|Q4R4X6.1|RAB2A_MACFA RecName: Full=Ras-related protein Rab-2A
gi|20379036|gb|AAM21078.1|AF498930_1 small GTP binding protein RAB2A [Homo sapiens]
gi|35837|emb|CAA31411.1| unnamed protein product [Homo sapiens]
gi|164054|gb|AAA30888.1| GTP-binding protein (rab2) [Canis lupus familiaris]
gi|14286264|gb|AAH08929.1| RAB2A, member RAS oncogene family [Homo sapiens]
gi|54696258|gb|AAV38501.1| RAB2, member RAS oncogene family [Homo sapiens]
gi|55731983|emb|CAH92700.1| hypothetical protein [Pongo abelii]
gi|61358667|gb|AAX41604.1| RAB2 member RAS oncogene family [synthetic construct]
gi|67970120|dbj|BAE01404.1| unnamed protein product [Macaca fascicularis]
gi|67971014|dbj|BAE01849.1| unnamed protein product [Macaca fascicularis]
gi|119607233|gb|EAW86827.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119607234|gb|EAW86828.1| RAB2, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|189065426|dbj|BAG35265.1| unnamed protein product [Homo sapiens]
gi|261860492|dbj|BAI46768.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|312151824|gb|ADQ32424.1| RAB2A, member RAS oncogene family [synthetic construct]
gi|335773365|gb|AEH58368.1| Ras-related protein Rab-2A-like protein [Equus caballus]
gi|343960663|dbj|BAK61921.1| ras-related protein Rab-2A [Pan troglodytes]
gi|380783321|gb|AFE63536.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|383408523|gb|AFH27475.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|384948552|gb|AFI37881.1| ras-related protein Rab-2A isoform a [Macaca mulatta]
gi|410218884|gb|JAA06661.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410260538|gb|JAA18235.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410305644|gb|JAA31422.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|410355261|gb|JAA44234.1| RAB2A, member RAS oncogene family [Pan troglodytes]
gi|417397207|gb|JAA45637.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|324521795|gb|ADY47928.1| Ras-related protein Rab-8B [Ascaris suum]
Length = 223
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/208 (44%), Positives = 136/208 (65%), Gaps = 6/208 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + V GK++KL I
Sbjct: 16 AKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIEVDGKKIKLQI 75
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 76 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMII 133
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D + R VSRE G LA E+G+ FLE SAK NVE+ F LA I ++ +
Sbjct: 134 GNKCDVEERRQVSRERGEQLAIEYGTKFLETSAKANINVEEAFFTLARDIKLKTERASHQ 193
Query: 186 GSNVVKRNILKQKPENQSPPI--GGCCS 211
+ I ++P+ +S I G CS
Sbjct: 194 CTTQNTGRISMEQPQKKSASIFSGWRCS 221
>gi|311253799|ref|XP_001926739.2| PREDICTED: ras-related protein Rab-2A [Sus scrofa]
gi|385281364|gb|AFI57834.1| ras-related protein Rab-2A [Capra hircus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|51468996|emb|CAH17998.1| RAB1-like [Poa pratensis]
Length = 203
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 128/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VVS E A A E G F+E SAK NVEQ F ++ I + + +N
Sbjct: 123 CDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q CCS
Sbjct: 183 RPATVQIRGQPVEQKT---SCCS 202
>gi|449016131|dbj|BAM79533.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 209
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 129/209 (61%), Gaps = 8/209 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVA-GKRLKLT 65
+ +D FK+LLIGDSGVGKS LL+ F S D TIGVDFKIK L GK +KL
Sbjct: 3 TTDFDYLFKLLLIGDSGVGKSCLLLRFAEGSFSDSFMSTIGVDFKIKSLQFEDGKVVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+V+DVT E+F N++ W E++ Y++ C K+L
Sbjct: 63 IWDTAGQERFRTITSSYYRGAHGIIIVFDVTDEESFKNVTS-WISEIENYASESVC-KLL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE- 184
VGNK D +RVV+R++ LA+ G ++E SAKT ++VE+ F + +I L
Sbjct: 121 VGNKTDLTEQRVVTRQQAEELAQRLGIPYIETSAKTADHVEEAFVMMTKEIRNRTGNLAL 180
Query: 185 ---EGSNVVKRNILKQKPENQSPPIGGCC 210
G+ + + + Q GGCC
Sbjct: 181 AKGSGAGTSRSGVDVRAETEQVSQSGGCC 209
>gi|73535753|pdb|1Z0A|A Chain A, Gdp-Bound Rab2a Gtpase
gi|73535754|pdb|1Z0A|B Chain B, Gdp-Bound Rab2a Gtpase
gi|73535755|pdb|1Z0A|C Chain C, Gdp-Bound Rab2a Gtpase
gi|73535756|pdb|1Z0A|D Chain D, Gdp-Bound Rab2a Gtpase
Length = 174
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/173 (51%), Positives = 121/173 (69%), Gaps = 7/173 (4%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL
Sbjct: 5 SAYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML
Sbjct: 63 IWDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIML 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 121 IGNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 173
>gi|170592447|ref|XP_001900976.1| Rab family protein 8 [Brugia malayi]
gi|158591043|gb|EDP29656.1| Rab family protein 8, putative [Brugia malayi]
Length = 237
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 131/200 (65%), Gaps = 5/200 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKSYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVDRMII 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA--LKIMEVPSLLE 184
GNK D + R VSRE G LA E+G+ F+E SAK NVE+ F LA +K+ + E
Sbjct: 120 GNKCDIEERRQVSRERGEQLAIEYGTKFMETSAKANINVEEAFFTLARDIKLKTERASQE 179
Query: 185 EGSNVVKRNILKQKPENQSP 204
+ R + Q P S
Sbjct: 180 HTTQNTGRITVHQTPRKSSS 199
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 96/177 (54%), Positives = 120/177 (67%), Gaps = 10/177 (5%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M +S S YD K+LLIGDSGVGKS LLV F+ D SP TIG+DFKIK +
Sbjct: 1 MSASGENSKQYDSIMKVLLIGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKTVD 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
+ GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ + W K V ++
Sbjct: 58 INGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENVKN-WFKTVSDHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
T+ D +LVGNK D D+ R+V+ E+G AL KE G F+E SAK NV + F LA
Sbjct: 117 TD-DAQLLLVGNKCDMDT-RLVTHEQGEALGKELGIPFVEASAKDDTNVNEVFFTLA 171
>gi|157108598|ref|XP_001650303.1| ras-related protein Rab-1A, putative [Aedes aegypti]
gi|108879268|gb|EAT43493.1| AAEL005069-PA [Aedes aegypti]
Length = 206
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 102/213 (47%), Positives = 135/213 (63%), Gaps = 13/213 (6%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
S+S S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK
Sbjct: 2 SASAMSPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKT 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++
Sbjct: 62 IKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVK-TWLEEIERYAC-ENV 119
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---ME 178
K+LVGNK D +++VV + A + G FLE SAK NVEQ F +A +I +
Sbjct: 120 NKLLVGNKCDLQTKKVVDTTTAMEYANQLGIPFLETSAKNATNVEQAFMTMAAEIKNRVG 179
Query: 179 VPSLLEEGSNVVKRNILKQKP-ENQSPPIGGCC 210
PS E + VK I K + E++S GCC
Sbjct: 180 PPSSAAEAPSAVK--IDKSRSVESKS----GCC 206
>gi|428184440|gb|EKX53295.1| hypothetical protein GUITHDRAFT_91995 [Guillardia theta CCMP2712]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 93/170 (54%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ L + GK +KL I
Sbjct: 2 STEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N KMLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++VV A + G FLE SAK NVEQ F +A +I
Sbjct: 120 GNKCDLTAKKVVDYNTAKEFADQLGIPFLETSAKDSTNVEQAFITMAAEI 169
>gi|21313162|ref|NP_083852.1| ras-related protein Rab-1B [Mus musculus]
gi|354494718|ref|XP_003509482.1| PREDICTED: ras-related protein Rab-1B-like [Cricetulus griseus]
gi|46577116|sp|Q9D1G1.1|RAB1B_MOUSE RecName: Full=Ras-related protein Rab-1B
gi|12834379|dbj|BAB22888.1| unnamed protein product [Mus musculus]
gi|16741106|gb|AAH16408.1| RAB1B, member RAS oncogene family [Mus musculus]
gi|74140247|dbj|BAE33821.1| unnamed protein product [Mus musculus]
gi|112292937|dbj|BAF02846.1| Rab1B [Mus musculus]
gi|148701158|gb|EDL33105.1| RAB1B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|344243245|gb|EGV99348.1| Ras-related protein Rab-1B [Cricetulus griseus]
Length = 201
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPASGGCC 201
>gi|392875748|gb|AFM86706.1| Ras-related protein ORAB-1 [Callorhinchus milii]
Length = 205
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 100/207 (48%), Positives = 127/207 (61%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
Y FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YGYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 126 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 185
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
NI QS P+ GGCC
Sbjct: 186 EKSNVNI-------QSTPVKSSSGGCC 205
>gi|45201075|ref|NP_986645.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|44985858|gb|AAS54469.1| AGL021Wp [Ashbya gossypii ATCC 10895]
gi|374109896|gb|AEY98801.1| FAGL021Wp [Ashbya gossypii FDAG1]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 99/182 (54%), Positives = 123/182 (67%), Gaps = 11/182 (6%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
+ SSSG N YD KILL+GDSGVGKS LLV F+ D SP TIG+DFKIK +
Sbjct: 7 VSSSSGAKN-YDSIMKILLVGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKAVD 62
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
+ GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W V+ ++
Sbjct: 63 INGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQ-WFTTVNQHA 121
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N++ +LVGNK D D+ R V+ E+G +LAKE G F+E SAK ENV F LA I
Sbjct: 122 -NEEAQLLLVGNKKDMDT-RAVTYEQGESLAKELGVPFIEASAKDDENVSDIFFTLAKLI 179
Query: 177 ME 178
E
Sbjct: 180 QE 181
>gi|350418387|ref|XP_003491843.1| PREDICTED: ras-related protein Rab-18-like [Bombus impatiens]
Length = 223
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
K+L+IG+S VGKSS+L+ F +++ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 9 LKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG ILVYDVT R TF L + W E++ Y D +KM+VGNK+D
Sbjct: 69 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVGNKIDLP 127
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+ R VS EEG+ A+ H +L++E SAKT + ++ CFE+L KI++ P L +
Sbjct: 128 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWD 177
>gi|289740161|gb|ADD18828.1| GTPase Rab2 [Glossina morsitans morsitans]
Length = 213
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SA+T NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSARTAANVEEAFINTAKEIYE 169
>gi|6517192|dbj|BAA87878.1| Drab2 [Drosophila melanogaster]
Length = 213
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 101/220 (45%), Positives = 136/220 (61%), Gaps = 27/220 (12%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D DS R V +EEG A A+E+G +F+E SA+T NVE+ F A +I E ++EG
Sbjct: 118 GNKSDLDSRREVKKEEGEAFARENGLVFMETSARTAANVEEAFINTAKEIYEK---IQEG 174
Query: 187 -------SNVVKRNILKQKPENQSPPI---------GGCC 210
+N +K + P N S P GCC
Sbjct: 175 VFDINNEANGIKIG-QQHSPTNPSLPGAGGAAGAANSGCC 213
>gi|392876326|gb|AFM86995.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|45382561|ref|NP_990559.1| ras-related protein Rab-2A [Gallus gallus]
gi|224046295|ref|XP_002198446.1| PREDICTED: ras-related protein Rab-2A isoform 1 [Taeniopygia
guttata]
gi|82245348|sp|Q90965.1|RAB2A_CHICK RecName: Full=Ras-related protein Rab-2A
gi|664925|emb|CAA59004.1| GTP-binding protein [Gallus gallus]
gi|387017962|gb|AFJ51099.1| RAB2, member RAS oncogene family [Crotalus adamanteus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|213513554|ref|NP_001133505.1| ras-related protein Rab-2A [Salmo salar]
gi|197632081|gb|ACH70764.1| RAB2A, member RAS oncogene family [Salmo salar]
gi|209154270|gb|ACI33367.1| Ras-related protein Rab-2A [Salmo salar]
gi|223647330|gb|ACN10423.1| Ras-related protein Rab-2A [Salmo salar]
gi|223649324|gb|ACN11420.1| Ras-related protein Rab-2A [Salmo salar]
gi|223673215|gb|ACN12789.1| Ras-related protein Rab-2A [Salmo salar]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|156838990|ref|XP_001643191.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
gi|156113790|gb|EDO15333.1| hypothetical protein Kpol_1011p3 [Vanderwaltozyma polyspora DSM
70294]
Length = 214
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 98/182 (53%), Positives = 124/182 (68%), Gaps = 12/182 (6%)
Query: 3 SSSGQSN--SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
S+SG +N +YD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK +
Sbjct: 6 STSGSTNGKNYDSIMKILLIGDSGVGKSCLLVRFVD---DKFNPSFITTIGIDFKIKTVE 62
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
+ GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT +TF N+ W K V ++
Sbjct: 63 INGKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQ-WFKTVTEHA 121
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N + +LVGNK D D+ R V+ E+G L+KE G F+E SAK ENV + F LA I
Sbjct: 122 -NDEAQLLLVGNKSDMDT-RAVTYEQGEELSKELGIPFIESSAKNDENVNEIFSTLAKLI 179
Query: 177 ME 178
E
Sbjct: 180 QE 181
>gi|156119376|ref|NP_001095172.1| ras-related protein Rab-2A [Oryctolagus cuniculus]
gi|266878|sp|Q01971.1|RAB2A_RABIT RecName: Full=Ras-related protein Rab-2A
gi|1696|emb|CAA48208.1| tubulovesicle-membrane-associated GTP-binding protein [Oryctolagus
cuniculus]
Length = 212
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|340726562|ref|XP_003401625.1| PREDICTED: ras-related protein Rab-18-like [Bombus terrestris]
Length = 223
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
K+L+IG+S VGKSS+L+ F +++ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 9 LKLLMIGESNVGKSSILLRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 68
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG ILVYDVT R TF L + W E++ Y D +KM+VGNK+D
Sbjct: 69 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVGNKIDLP 127
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+ R VS EEG+ A+ H +L++E SAKT + ++ CFE+L KI++ P L +
Sbjct: 128 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWD 177
>gi|131847|sp|P22127.1|RAB10_DISOM RecName: Full=Ras-related protein Rab-10; Short=ORA1
gi|213115|gb|AAA49230.1| GTP-binding protein [Discopyge ommata]
Length = 200
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVV + +G +A+EH F E SAK N+E+ F LA I++
Sbjct: 123 KCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQ 172
>gi|71026455|ref|XP_762899.1| small GTP-binding protein Rab1 [Theileria parva strain Muguga]
gi|68349851|gb|EAN30616.1| small GTP-binding protein rab1 [Theileria parva]
Length = 227
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 90/204 (44%), Positives = 130/204 (63%), Gaps = 15/204 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFI--------SSSVDDLSPTIGVDFKIKLLTVAGKRL 62
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFAVFLFIFIDNTYSESYMSTIGVDFKIKTVKIDNTTI 63
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +++D Y+T+ C
Sbjct: 64 KLQIWDTAGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC- 122
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIME 178
K+L+GNK+D RVVS +E +A+++ ++E SAKT NVE+ F +A K+ +
Sbjct: 123 KLLIGNKIDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQ 182
Query: 179 VPSLLEEGSNVVKRNILKQKPENQ 202
PS ++ V N + P N+
Sbjct: 183 YPS--NAPASTVSLNTASKVPTNR 204
>gi|440291312|gb|ELP84581.1| hypothetical protein EIN_171560 [Entamoeba invadens IP1]
Length = 207
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 131/202 (64%), Gaps = 10/202 (4%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
S+ D FK+LLIGDSGVGKS LL+ F + D TIGVDFKIK + + G +KL I
Sbjct: 2 SDPKDYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQINGLNVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGAQGII+VY V +TF N+ W +E++ Y++ + +K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ESVIKLLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME------VP 180
GNK D + ER V+ E+G LA F+E SAK NV++ F ++A IM+ P
Sbjct: 120 GNKCDLEDERAVTVEQGQELANSLNVSFMESSAKKALNVDELFNKIATDIMKNLQTSNTP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQ 202
S ++ +N+ K N K KPE +
Sbjct: 180 SKTDDKANLSKGN-GKAKPEKK 200
>gi|387914838|gb|AFK11028.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+D KIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|392935497|pdb|3TKL|A Chain A, Crystal Structure Of The Gtp-Bound Rab1a In Complex With
The Coiled- Coil Domain Of Lida From Legionella
Pneumophila
Length = 196
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAG 59
+GS S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + G
Sbjct: 3 LGSMSSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 62
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ +
Sbjct: 63 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-E 120
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+ K+LVGNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 121 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|403372762|gb|EJY86287.1| Rab family GTPase [Oxytricha trifallax]
Length = 223
Score = 171 bits (432), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 87/171 (50%), Positives = 117/171 (68%), Gaps = 4/171 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRL 62
SS + YD K+++IGDS VGK+ LL+ F S PTIG+DFKIK + V KR+
Sbjct: 2 SSFKKPGYDHLLKLIIIGDSSVGKTCLLLRFSEDSFPVSHMPTIGIDFKIKKINVDDKRV 61
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL +WDTAGQERFRT+T +YY+GA GIILVYD T ++TF N+ + W K++D ++ NQ+
Sbjct: 62 KLQVWDTAGQERFRTITQTYYKGAMGIILVYDCTDQQTFNNIQN-WLKQIDQHA-NQNVA 119
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
K+LV NK D+ ++V+ E G LA +HG LF E SAKT NV + F Q+A
Sbjct: 120 KVLVANKCDK-PDKVIETERGKQLAADHGLLFFETSAKTGHNVNEVFHQIA 169
>gi|167524781|ref|XP_001746726.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774996|gb|EDQ88622.1| predicted protein [Monosiga brevicollis MX1]
Length = 203
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 125/201 (62%), Gaps = 3/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYSETYISTIGVDFKIRTIELEGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E++ Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKESFDNVKQ-WLTEIERYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++ V A A E G FLE SAK+ NVEQ F +A +I ++
Sbjct: 123 SDLQSKKQVDYTTAKAFADERGIPFLETSAKSATNVEQAFMTMASEIKARMGPAGASNDT 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
K + + + S GGCC
Sbjct: 183 SKGTVSMKAGKPVSSGGGGCC 203
>gi|162463546|ref|NP_001105546.1| GTP-binding protein YPTM1 [Zea mays]
gi|466170|sp|P16976.2|YPTM1_MAIZE RecName: Full=GTP-binding protein YPTM1
gi|287833|emb|CAA44918.1| yptm1 [Zea mays]
Length = 208
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 128/211 (60%), Gaps = 12/211 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E+D Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PS 181
GNK D R V A A+E G FLE SAK NVE+ F ++ I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 182 LLEEGSNVVKRNILKQKP-ENQSPPIGGCCS 211
L + SNVV+ +K +P + + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F+N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++ V R AK FLE SAK NVEQ F +A +I L +
Sbjct: 123 CDLTSKKQVDRSTAEEFAKSLNIPFLETSAKISTNVEQAFMTMAAEIKN--RLASQPITT 180
Query: 190 VKRNILKQKPENQSPPI-GGCC 210
++ L P P GGCC
Sbjct: 181 QQQPSLGITPAPSKPQSNGGCC 202
>gi|159490336|ref|XP_001703135.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500073|sp|Q39571.1|YPTC1_CHLRE RecName: Full=GTP-binding protein YPTC1
gi|806724|gb|AAA82727.1| YptC1 [Chlamydomonas reinhardtii]
gi|78522571|gb|ABB46195.1| YptC1 [Chlamydomonas incerta]
gi|158270765|gb|EDO96600.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 203
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S++VV A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTSKKVVEYSVAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|197127906|gb|ACH44404.1| putative RAB1B member RAS oncogene family variant 2 [Taeniopygia
guttata]
Length = 205
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 127/207 (61%), Gaps = 4/207 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
K N+ Q + + GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTKVKQSS-GGCC 205
>gi|299753665|ref|XP_001833414.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
gi|298410405|gb|EAU88348.2| GTP-binding protein ypt1 [Coprinopsis cinerea okayama7#130]
Length = 204
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 124/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TF+N+ W E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLSEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D ++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTGKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTST 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
S K + + QS GGCC
Sbjct: 180 PSGAAKSSTVTPGQTVQSQTGGGCC 204
>gi|145484709|ref|XP_001428364.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833834|emb|CAI39372.1| rab_A10 [Paramecium tetraurelia]
gi|124395449|emb|CAK60966.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 94/205 (45%), Positives = 128/205 (62%), Gaps = 10/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKILLIG+S VGKSSLL+ F + PTIGVDFKI+ + GK +K+ IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+T+SYY+GA GIIL YD+T +++F ++ + W EV+ +++ ++ V++LVGNK
Sbjct: 67 AGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA----LKIMEVPSLLEE 185
D +S+R V+ EEG LA G F+E SAK NV+Q F LA KI +
Sbjct: 125 ADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNIKAKIGKSEDKPTP 184
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
G N+ P + GGCC
Sbjct: 185 GGKTPAGNLKNTSPAKKE---GGCC 206
>gi|74193229|dbj|BAE20616.1| unnamed protein product [Mus musculus]
Length = 201
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+L+IGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLMIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPASGGCC 201
>gi|321473003|gb|EFX83971.1| hypothetical protein DAPPUDRAFT_223052 [Daphnia pulex]
Length = 203
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 128/204 (62%), Gaps = 9/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYSESYISTIGVDFKIRTIDLDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +++VV A++ G FLE SAK NVEQ F +A +I M PS +G
Sbjct: 123 CDLSTKKVVDYAAAKEYAEQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPSAPSDG 182
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+ N +P QS GCC
Sbjct: 183 VGGININ-SSSRPVEQSK--SGCC 203
>gi|322803217|gb|EFZ23238.1| hypothetical protein SINV_08216 [Solenopsis invicta]
Length = 224
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 86/174 (49%), Positives = 116/174 (66%), Gaps = 3/174 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
KIL+IG+S VGKSS+L+ F +++ T+G+D+K K + + G +KL IWDTAGQE
Sbjct: 12 LKILMIGESNVGKSSILLRFTEDEFYENMQSTVGMDYKTKQVNIDGNVVKLAIWDTAGQE 71
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG IL+YDVT R TF L + W E++ Y D VKM+VGNK+D
Sbjct: 72 RFRTLTPSYYRDGQGAILMYDVTDRNTFVKL-ETWLNELNTYCNKTDIVKMVVGNKIDL- 129
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
R VS E+G+ A+ H +L++E SAKT + V CFE+L KI++ P L + S
Sbjct: 130 PNREVSTEDGLQFARRHQTLYIESSAKTADGVRCCFEELVQKIIQTPGLWDTHS 183
>gi|225718734|gb|ACO15213.1| Ras-related protein Rab-2 [Caligus clemensi]
Length = 212
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 134/201 (66%), Gaps = 13/201 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++++ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMISIEGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF++L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFSHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +++R V REEG A A+EHG +F+E SAKT NVE+ F A E+ ++EG
Sbjct: 118 GNKSDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTA---REIYDKIQEG 174
Query: 187 SNVVKR--NILKQKPENQSPP 205
+ N +K P+N SP
Sbjct: 175 VFDINNEANGIKIGPQN-SPA 194
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 129/205 (62%), Gaps = 12/205 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GKR+KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + ++ ++ N+D KML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGILLVYDITNAKSFENISK-WLRNIEEHA-NEDVEKMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + RVVS+ +G + EH F E SAK N+E+ F LA ++ E +
Sbjct: 123 KCDMEDVRVVSKAKGEQIVSEHNIRFFETSAKANINIEKAFLTLAEDVLHKTPGKEPTNE 182
Query: 189 VVKRNILKQKPENQSPPIGG--CCS 211
V N N+S GG CCS
Sbjct: 183 NVDVN-------NRSGSSGGVRCCS 200
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 170 bits (430), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 121/182 (66%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + TIG+DFKIK + + K++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQEKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLGNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KFDMDDKRVVPKGKGEQIAREHGIRFFETSAKANTNIEKAFLTLAQDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>gi|427787333|gb|JAA59118.1| Putative rab2a member ras oncoprotein family [Rhipicephalus
pulchellus]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|325303716|tpg|DAA34556.1| TPA_exp: RAS oncogene family member RAB2 [Amblyomma variegatum]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLETRREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|242010199|ref|XP_002425860.1| RAB-2,4,14, putative [Pediculus humanus corporis]
gi|212509812|gb|EEB13122.1| RAB-2,4,14, putative [Pediculus humanus corporis]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/172 (52%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W + +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLDDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D + +R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLEIKREVKKEEGEAFAREHGLIFMETSAKTATNVEEAFINTAKEIYE 169
>gi|156551213|ref|XP_001600682.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Nasonia
vitripennis]
Length = 209
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/208 (45%), Positives = 133/208 (63%), Gaps = 6/208 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK + S+R VS+E G ALA E+G F+E SAK+ NVE+ F LA I E
Sbjct: 120 GNKCELTSKRQVSKERGEALAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLEA 179
Query: 187 SNVVK---RNILKQKPENQSPPIGGCCS 211
SN K + +P+ + P + CS
Sbjct: 180 SNPPKGGGHQLKAMEPQRKPPSLFSRCS 207
>gi|395515756|ref|XP_003762065.1| PREDICTED: ras-related protein Rab-26 [Sarcophilus harrisii]
Length = 261
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 10/185 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
SSSG + YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 59 SSSG--DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLNVDGV 116
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YDVT R +F N+ W E+ Y+ +D
Sbjct: 117 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNRASFDNIQ-AWLTEIHEYA-QKD 174
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---- 176
V ML+GNKVD ERVV RE+G LAKE+G F+E SAKT NV+ F+ +A ++
Sbjct: 175 VVLMLLGNKVDSTQERVVKREDGEKLAKEYGVPFMETSAKTGLNVDLAFKAIAKELKHRS 234
Query: 177 MEVPS 181
M++PS
Sbjct: 235 MKLPS 239
>gi|414587082|tpg|DAA37653.1| TPA: ypt-like protein isoform 1 [Zea mays]
gi|414587083|tpg|DAA37654.1| TPA: ypt-like protein isoform 2 [Zea mays]
Length = 208
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 128/211 (60%), Gaps = 12/211 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E+D Y+ N K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PS 181
GNK D R V A A+E G FLE SAK NVE+ F ++ I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAEEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 182 LLEEGSNVVKRNILKQKP-ENQSPPIGGCCS 211
L + SNVV+ +K +P + + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|363739586|ref|XP_414855.3| PREDICTED: ras-related protein Rab-26 [Gallus gallus]
Length = 253
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 10/185 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
SSSG+ YDL+FK++L+GDSGVGK+ LLV F + T+G+DF+ K+LTV G
Sbjct: 51 SSSGEF--YDLAFKVMLVGDSGVGKTCLLVRFKDGAFLAGSFISTVGIDFRNKVLTVDGV 108
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YDVT + +F N+ W E+ Y+ QD
Sbjct: 109 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQ-AWLTEIHEYA-QQD 166
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---- 176
V ML+GNKVD +RVV RE+G LAKE+G F+E SAK+ NVE F +A ++
Sbjct: 167 VVLMLLGNKVDSAQDRVVKREDGEKLAKEYGVPFMETSAKSGLNVELAFTAIAKELKHRS 226
Query: 177 MEVPS 181
M++P+
Sbjct: 227 MKLPN 231
>gi|345569442|gb|EGX52308.1| hypothetical protein AOL_s00043g97 [Arthrobotrys oligospora ATCC
24927]
Length = 203
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/211 (48%), Positives = 131/211 (62%), Gaps = 19/211 (9%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIDLDGKRIK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIQ-TWFQNVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEV 179
+L+GNK D + +RVVS E G ALA E G F+E SAK NVE+ F LA +IM+
Sbjct: 119 ILIGNKCDWEEKRVVSTERGQALANELGIPFMEVSAKANINVEEAFLLLARDIKKRIMDS 178
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
S + VV N E S G CC
Sbjct: 179 SSGEKNQPGVVNVN------ETSSAAGGKCC 203
>gi|154416464|ref|XP_001581254.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736312|gb|AAX97485.1| small Rab GTPase RabX8 [Trichomonas vaginalis]
gi|121915480|gb|EAY20268.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 207
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/211 (40%), Positives = 135/211 (63%), Gaps = 11/211 (5%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGKRLKL 64
+ ++ YD FKI+L+GDSGVGK++++ + + PTIGV+F+ K + + K++KL
Sbjct: 2 AQEAPDYDFQFKIILLGDSGVGKTAIITRYCKELFHEQDPTIGVNFQQKYIEINNKKIKL 61
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQE+FRT+T +YR G ILVYD+T +++ +L +W E++ T+ DC +
Sbjct: 62 AIWDTAGQEKFRTITRQFYRKVDGAILVYDLTDKKSLEDLESLWIPELNSNVTS-DCQML 120
Query: 125 LVGNKVD--RDSE---RVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
+VGNK D D E ++V++EE +A++H +LF+E SAK+ E V+Q FE+L +++E
Sbjct: 121 IVGNKCDLKEDPEYKDKIVTKEEAENVARKHATLFVESSAKSNEGVQQAFEELVTRLVEK 180
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
P EE + ++ P+N SP G CC
Sbjct: 181 PRTHEEDA----AETVQIDPKN-SPSQGWCC 206
>gi|357135065|ref|XP_003569132.1| PREDICTED: ras-related protein RABD1-like [Brachypodium distachyon]
Length = 205
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDS VGKS LL+ F + VD TIGVDFKI+ + + GK +KL IWDT
Sbjct: 6 YDYLFKLLLIGDSSVGKSCLLLRFADDAYVDTYISTIGVDFKIRTVELDGKSVKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ C K+LVGNK
Sbjct: 66 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +VV EE ALA G FLE SAK NVE+ F ++ +I
Sbjct: 124 CDLVDSKVVDTEEAKALADSLGMTFLETSAKESINVEKAFLTMSSEI 170
>gi|449431874|ref|XP_004133725.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 204
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 102/205 (49%), Positives = 125/205 (60%), Gaps = 14/205 (6%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME----VPSLLEEG 186
D +VV + A A E G FLE SAK NVEQ F +A +I + P+ +
Sbjct: 127 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEIKKKMGSQPTSSKSS 186
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
NV +K +P Q CCS
Sbjct: 187 GNVQ----MKGQPIQQK---SSCCS 204
>gi|13569962|ref|NP_112243.1| ras-related protein Rab-1B [Homo sapiens]
gi|197100392|ref|NP_001127221.1| ras-related protein Rab-1B [Pongo abelii]
gi|388490382|ref|NP_001253093.1| ras-related protein Rab-1B [Macaca mulatta]
gi|73983002|ref|XP_852545.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Canis lupus
familiaris]
gi|194218484|ref|XP_001491236.2| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Equus
caballus]
gi|301762492|ref|XP_002916663.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Ailuropoda
melanoleuca]
gi|332250270|ref|XP_003274276.1| PREDICTED: ras-related protein Rab-1B [Nomascus leucogenys]
gi|344295844|ref|XP_003419620.1| PREDICTED: ras-related protein Rab-1B-like isoform 1 [Loxodonta
africana]
gi|348565037|ref|XP_003468310.1| PREDICTED: ras-related protein Rab-1B-like [Cavia porcellus]
gi|395851731|ref|XP_003798406.1| PREDICTED: ras-related protein Rab-1B [Otolemur garnettii]
gi|397517009|ref|XP_003828712.1| PREDICTED: ras-related protein Rab-1B [Pan paniscus]
gi|403293572|ref|XP_003937787.1| PREDICTED: ras-related protein Rab-1B [Saimiri boliviensis
boliviensis]
gi|410974562|ref|XP_003993713.1| PREDICTED: ras-related protein Rab-1B isoform 1 [Felis catus]
gi|23396834|sp|Q9H0U4.1|RAB1B_HUMAN RecName: Full=Ras-related protein Rab-1B
gi|75070920|sp|Q5RE13.1|RAB1B_PONAB RecName: Full=Ras-related protein Rab-1B
gi|33150668|gb|AAP97212.1|AF092437_1 rab1B [Homo sapiens]
gi|12052796|emb|CAB66570.1| hypothetical protein [Homo sapiens]
gi|49522855|gb|AAH71169.1| RAB1B, member RAS oncogene family [Homo sapiens]
gi|55726450|emb|CAH89994.1| hypothetical protein [Pongo abelii]
gi|117645214|emb|CAL38073.1| hypothetical protein [synthetic construct]
gi|158257604|dbj|BAF84775.1| unnamed protein product [Homo sapiens]
gi|189067518|dbj|BAG37733.1| unnamed protein product [Homo sapiens]
gi|208967236|dbj|BAG73632.1| RAB1B, member RAS oncogene family [synthetic construct]
gi|351710863|gb|EHB13782.1| Ras-related protein Rab-1B [Heterocephalus glaber]
gi|380785433|gb|AFE64592.1| ras-related protein Rab-1B [Macaca mulatta]
gi|384949652|gb|AFI38431.1| ras-related protein Rab-1B [Macaca mulatta]
gi|410214286|gb|JAA04362.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410266454|gb|JAA21193.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410305364|gb|JAA31282.1| RAB1B, member RAS oncogene family [Pan troglodytes]
gi|410336325|gb|JAA37109.1| RAB1B, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPAGGGCC 201
>gi|164658714|ref|XP_001730482.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
gi|159104378|gb|EDP43268.1| hypothetical protein MGL_2278 [Malassezia globosa CBS 7966]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 101/213 (47%), Positives = 131/213 (61%), Gaps = 9/213 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
+G S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 AGLSPDYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT TF N+ W +E++ Y+ + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDESTFANVKQ-WLQEIERYAC-EGVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+LVGNK D + + V E LA E G FL+ SAK NVEQ F +A +I M V
Sbjct: 120 LLVGNKADLTNSKAVDFESAKQLADELGIAFLDTSAKDATNVEQAFLTMAKQIKDRMGVS 179
Query: 181 SLLEEGSNVVKRNILK-QKPEN--QSPPIGGCC 210
++ + ++ LK + +N S GGCC
Sbjct: 180 AMQNGSAGGAGKSTLKVGQGQNVQASSNSGGCC 212
>gi|356563372|ref|XP_003549938.1| PREDICTED: GTP-binding protein YPTM2-like isoform 2 [Glycine max]
Length = 215
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 103/226 (45%), Positives = 126/226 (55%), Gaps = 41/226 (18%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEG-------------IALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D + +VVS E A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 CDLTANKVVSSETAKVILNFVVLFLLTSAFADEIGIPFMETSAKNATNVEQAFMAMAAEI 182
Query: 177 MEVPSLLEEGSNVVKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GCCS
Sbjct: 183 --------------KNRMASQPVNNARPPTVQIRGQPVNQKAGCCS 214
>gi|254570485|ref|XP_002492352.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|12381851|emb|CAC24717.1| Sec4p [Komagataella pastoris]
gi|238032150|emb|CAY70093.1| Secretory vesicle-associated Rab GTPase essential for exocytosis
[Komagataella pastoris GS115]
gi|328353638|emb|CCA40036.1| Ras-related protein RIC1 [Komagataella pastoris CBS 7435]
Length = 204
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/187 (47%), Positives = 125/187 (66%), Gaps = 3/187 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAG 59
M S YDL+ K+LL+GDSGVGKS LL+ F+ S + TIG+DFKI+ + + G
Sbjct: 1 MASRGTSRQQYDLTMKLLLVGDSGVGKSCLLLRFVDDSFNPSFITTIGIDFKIRTVEING 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K++KL IWDTAGQERFRT+T++YYRGA GIILVYDVT +F ++ + W + ++ ++ N+
Sbjct: 61 KKVKLQIWDTAGQERFRTITTAYYRGAMGIILVYDVTDERSFNSVHN-WYQTLNQHA-NE 118
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D LVGNK D + R V++E+G LA E G FLE SAK+ +NV+ F +LA + E
Sbjct: 119 DAQLFLVGNKCDDEESRQVTKEQGEQLASELGVPFLEASAKSNKNVDAIFLELAKRFEEK 178
Query: 180 PSLLEEG 186
++G
Sbjct: 179 MRNTQQG 185
>gi|225449603|ref|XP_002284071.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|296086273|emb|CBI31714.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIAKDIKQ--RLAETDSK 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
+ I +P+ Q+P CC
Sbjct: 188 AEPQTIKINQPDQAANGGQAPQKSACC 214
>gi|213401875|ref|XP_002171710.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
gi|211999757|gb|EEB05417.1| GTP-binding protein SAS1 [Schizosaccharomyces japonicus yFS275]
Length = 200
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 94/191 (49%), Positives = 130/191 (68%), Gaps = 9/191 (4%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ SYD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 3 TKSYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRIK 59
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+L+YDVT ++F N+ W V+ +++ ++ K
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDEKSFENIR-TWFSNVEQHAS-ENVFK 117
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+L+GNK D + +R V+ E+G ALA+E G FLE SAKT NV++ F LA +I +
Sbjct: 118 ILIGNKCDCEEQRQVTYEQGQALAEELGIKFLEASAKTNVNVDEAFFTLAREIKKQKIDA 177
Query: 184 EEGSNVVKRNI 194
E+ S+ NI
Sbjct: 178 EQESSAQASNI 188
>gi|13929006|ref|NP_113906.1| ras-related protein Rab-2A [Rattus norvegicus]
gi|131789|sp|P05712.1|RAB2A_RAT RecName: Full=Ras-related protein Rab-2A
gi|206555|gb|AAA42007.1| ras protein [Rattus norvegicus]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL T+GV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TMGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|302413135|ref|XP_003004400.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|261356976|gb|EEY19404.1| GTP-binding protein ypt1 [Verticillium albo-atrum VaMs.102]
gi|346972547|gb|EGY15999.1| GTP-binding protein ypt1 [Verticillium dahliae VdLs.17]
Length = 202
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 99/202 (49%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VV A G FLE SAK NVEQ F +A +I E + +N
Sbjct: 123 SDMADKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE--RMGTTTANN 180
Query: 190 VKRNILKQKPEN-QSPPIGGCC 210
KR++ +N S P GGCC
Sbjct: 181 EKRSVQVGPGQNVSSSPSGGCC 202
>gi|85001490|ref|XP_955461.1| small GTP-binding protein Rab1 [Theileria annulata strain Ankara]
gi|74951238|sp|Q4UB16.1|RAB1_THEAN RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1
gi|65303607|emb|CAI75985.1| small GTP-binding protein Rab1, putative [Theileria annulata]
Length = 220
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 85/176 (48%), Positives = 121/176 (68%), Gaps = 6/176 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +++D Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEVPS 181
+D RVV +E +A+++ ++E SAKT NVE+ F +A K+ + PS
Sbjct: 123 IDLVDSRVVLADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS 178
>gi|357613677|gb|EHJ68649.1| ras-related protein Rab-2A [Danaus plexippus]
Length = 212
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|302835618|ref|XP_002949370.1| RabD/Rab1 [Volvox carteri f. nagariensis]
gi|401686|sp|P31584.1|YPTV1_VOLCA RecName: Full=GTP-binding protein yptV1
gi|170661|gb|AAA34255.1| small G protein [Volvox carteri]
gi|300265197|gb|EFJ49389.1| RabD/Rab1 [Volvox carteri f. nagariensis]
Length = 203
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTVELDGKVIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLAEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D ++VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTGKKVVDYQAAKAFADEIGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|298707797|emb|CBJ30228.1| Rab1B, RAB family GTPase [Ectocarpus siliculosus]
Length = 203
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 90/167 (53%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDSKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDKESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++R V+ EE A A G FLE SAK NVE+ F +A +I
Sbjct: 123 SDLEAKRAVTTEEAKAFADTLGIEFLETSAKNASNVEKAFMMMASQI 169
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 122/174 (70%), Gaps = 3/174 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLK 63
S + +YD FK+LLIGDSGVGK+ L++ F S ++ TIG+DFKI+ + V GK++K
Sbjct: 89 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIK 148
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L +WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + +
Sbjct: 149 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 206
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+L+GNK D +++R V +E+ I LA+EHG F E SAK+ NV++ F LA I+
Sbjct: 207 LLLGNKCDMEAKRKVQKEQAIKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 260
>gi|170094132|ref|XP_001878287.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164646741|gb|EDR10986.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 204
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 125/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT E+FT++ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNESFTHVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D S++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTSKKVVEYSVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSST 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
S K + + QS G CC
Sbjct: 180 PSGAAKSSTVTPGQTVQSQQSGSCC 204
>gi|72535190|ref|NP_001026957.1| ras-related protein Rab-1A [Sus scrofa]
gi|75056559|sp|Q52NJ2.3|RAB1A_PIG RecName: Full=Ras-related protein Rab-1A
gi|62868642|gb|AAY17509.1| Ras-related protein Rab-1A [Sus scrofa]
Length = 205
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 128/208 (61%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT + +F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>gi|448089189|ref|XP_004196738.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|448093406|ref|XP_004197769.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359378160|emb|CCE84419.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
gi|359379191|emb|CCE83388.1| Piso0_003963 [Millerozyma farinosa CBS 7064]
Length = 205
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/180 (50%), Positives = 120/180 (66%), Gaps = 9/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S S SYD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 2 SGRAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIESK 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT TF N+ + W V ++ N
Sbjct: 59 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVEN-WFHTVTQHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D LVGNK D + R VS+E+G ALA + FLE SAK+ ENV+ F +LA I E
Sbjct: 117 EDAQIFLVGNKCDDEENRQVSKEDGQALASKLNVPFLEASAKSNENVDSIFYELASIIQE 176
>gi|126335536|ref|XP_001367034.1| PREDICTED: ras-related protein Rab-26-like [Monodelphis domestica]
Length = 261
Score = 170 bits (430), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 91/185 (49%), Positives = 127/185 (68%), Gaps = 10/185 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
SSSG + YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 59 SSSG--DFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLNVDGV 116
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YDVT R +F N+ W E+ Y+ +D
Sbjct: 117 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNRASFDNIQ-AWLTEIHEYA-QKD 174
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---- 176
V ML+GNKVD ERVV RE+G LAKE+G F+E SAKT NV+ F+ +A ++
Sbjct: 175 VVLMLLGNKVDSTQERVVKREDGEKLAKEYGVPFMETSAKTGLNVDLAFKAIAKELKHRS 234
Query: 177 MEVPS 181
M++PS
Sbjct: 235 MKLPS 239
>gi|296085943|emb|CBI31384.3| unnamed protein product [Vitis vinifera]
Length = 165
Score = 169 bits (429), Expect = 4e-40, Method: Compositional matrix adjust.
Identities = 81/113 (71%), Positives = 92/113 (81%), Gaps = 1/113 (0%)
Query: 48 VDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDV 107
VDFKI LLT+ GK+LKLTIWDTAGQERF TLT++YYRG GIILVYDVTR+ETFTNLSDV
Sbjct: 41 VDFKIILLTIGGKKLKLTIWDTAGQERFGTLTNTYYRGVHGIILVYDVTRQETFTNLSDV 100
Query: 108 WAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAK 160
W KEV+ YSTN C+ VGNKVDRDSER V+R EG++LA+EH FL K
Sbjct: 101 WEKEVEFYSTNHKCIDFFVGNKVDRDSERNVTR-EGMSLAQEHNVHFLNVVLK 152
>gi|392878122|gb|AFM87893.1| ras-related protein Rab-2A [Callorhinchus milii]
Length = 212
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVKFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|449279645|gb|EMC87180.1| Ras-related protein Rab-1A, partial [Columba livia]
Length = 197
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 191 KRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 179 KSNVKIQSTPVKQSS--GGCC 197
>gi|402218107|gb|EJT98185.1| ras-domain-containing protein [Dacryopinax sp. DJM-731 SS1]
Length = 215
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 92/185 (49%), Positives = 125/185 (67%), Gaps = 5/185 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGK 60
+S + S + KILLIGDS VGKSSLL+ F S ++ S TIGVDFK++ + V G
Sbjct: 2 ASDPATSAPANLKILLIGDSSVGKSSLLLRFSDQSFLSEEESSATIGVDFKVQRIEVDGV 61
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+ KL+IWDTAGQERFRT+TSSYYRGAQG+ILVYDV+ RE+F +L W E++ Y
Sbjct: 62 KYKLSIWDTAGQERFRTITSSYYRGAQGVILVYDVSSRESFDDLPR-WFTELETY-CGPS 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
K++VGNK+D++ R V EG A A+ G+LFLE SAK +V++ F+ + KI+ P
Sbjct: 120 VAKVIVGNKIDKEFSRRVPTAEGQAYAERMGALFLESSAKRGIHVDEVFQTIVRKIVATP 179
Query: 181 SLLEE 185
L ++
Sbjct: 180 ELWQK 184
>gi|54696254|gb|AAV38499.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368760|gb|AAX43232.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK +IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYTIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|112983258|ref|NP_001037612.1| GTP-binding protein RAB2 [Bombyx mori]
gi|99082890|gb|ABF66620.1| GTP-binding protein RAB2 [Bombyx mori]
Length = 214
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS---VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFRPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDT GQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTGGQEAFRSITRSYYRGAAGALLVYDITRRETFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLVFMETSAKTAANVEEAFINTAKEIYE 169
>gi|334312769|ref|XP_001374724.2| PREDICTED: ras-related protein Rab-1A-like [Monodelphis domestica]
Length = 257
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 127/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 60 HDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 119
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 120 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 177
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 178 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 237
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 238 EKSNVKIQSTPVKQSS--GGCC 257
>gi|328767509|gb|EGF77558.1| hypothetical protein BATDEDRAFT_20617 [Batrachochytrium
dendrobatidis JAM81]
Length = 208
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 95/213 (44%), Positives = 137/213 (64%), Gaps = 13/213 (6%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
++ ++ SYD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + + G
Sbjct: 2 ATSKNASYDYLIKLLLIGDSGVGKSCLLLRF---SDDSFTPSFITTIGIDFKIRTIELDG 58
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL IWDTAGQERFRT+T++YYRGA GI+L YDVT +F N+ + W + ++ +++ +
Sbjct: 59 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLTYDVTDERSFNNIRN-WIRNIEQHAS-E 116
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME- 178
K+L+GNK D ++V+S+E+G ALA EHG FLE SAK+ VE+ F LA I +
Sbjct: 117 GVNKILIGNKCDILDKKVISKEQGQALADEHGIKFLETSAKSNIGVEEAFYMLARDIKKR 176
Query: 179 -VPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ + E+ N+ + N + GCC
Sbjct: 177 LIDTAQEKTDLKTAGNVNVNQKGNAATA--GCC 207
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 84/172 (48%), Positives = 120/172 (69%), Gaps = 3/172 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGK+ L++ F + + TIG+DFK+K + V GK++KL +
Sbjct: 2 AKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + +ML+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIR-ENASAGVTRMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +++R VS+E G LAKEH F E SAK+ NVE+ F+ LA I++
Sbjct: 120 GNKCDVEAKRKVSKETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQ 171
>gi|402892814|ref|XP_003909603.1| PREDICTED: ras-related protein Rab-1B [Papio anubis]
Length = 264
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 68 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 127
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 128 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 185
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 186 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 244
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 245 ---ERPNLKIDSTPVKPAGGGCC 264
>gi|48103887|ref|XP_392903.1| PREDICTED: ras-related protein Rab-18-B [Apis mellifera]
Length = 223
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 83/174 (47%), Positives = 119/174 (68%), Gaps = 3/174 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
K+L+IG+S VGKSS+++ F +++ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 11 LKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG ILVYDVT R TF L + W E++ Y D +KM+VGNK+D
Sbjct: 71 RFRTLTPSYYRDGQGAILVYDVTDRVTFMKL-ETWLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
+ R VS EEG+ A+ H +L++E SAKT + ++ CFE+L KI++ P L + +
Sbjct: 130 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWDRHT 182
>gi|357125787|ref|XP_003564571.1| PREDICTED: ras-related protein RABE1a-like [Brachypodium
distachyon]
Length = 216
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 130/206 (63%), Gaps = 10/206 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 13 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 72
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+L+GNK
Sbjct: 73 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKVLIGNK 130
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA----LKIMEVPSLLE 184
D D S+R VS +G ALA E+G F E SAKT NVEQ F +A ++ E S E
Sbjct: 131 ADMDESKRAVSTAQGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQRLAETDSKPE 190
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
+ +K N Q E+ CC
Sbjct: 191 D--QTIKINKTGQGSEDPESQKSACC 214
>gi|56756457|gb|AAW26401.1| SJCHGC06657 protein [Schistosoma japonicum]
Length = 213
Score = 169 bits (429), Expect = 5e-40, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 14/204 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +L+ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARLINIDGKQVKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TFT+L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE F A I + ++EG
Sbjct: 118 GNKSDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDK---IQEG 174
Query: 187 SNVVKR--NILKQKPENQSPPIGG 208
+ V N +K P + P+GG
Sbjct: 175 ALDVNNEANGIKLGPHHN--PVGG 196
>gi|440548634|gb|AGC10822.1| Rab-1 [Eriocheir sinensis]
Length = 204
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 101/205 (49%), Positives = 129/205 (62%), Gaps = 13/205 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E+D Y+ ++ K+LVGN+
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDTTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNQ 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D ++VV + A G FLE SAK NVEQ F +A +I M PS G
Sbjct: 126 CDLTHKKVVDYQTAKEYADSLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPPS--APG 183
Query: 187 SNVVKRNI-LKQKPENQSPPIGGCC 210
S VK N + +P+ P GGCC
Sbjct: 184 SAGVKINPSVPVEPQ----PGGGCC 204
>gi|291399649|ref|XP_002716214.1| PREDICTED: RAB2A, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 212
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +L YD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLAYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|268560844|ref|XP_002646304.1| C. briggsae CBR-UNC-108 protein [Caenorhabditis briggsae]
Length = 214
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++ R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTANNVEEAFIDTAKEI 167
>gi|225709940|gb|ACO10816.1| Ras-related protein Rab-2 [Caligus rogercresseyi]
Length = 212
Score = 169 bits (429), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 132/201 (65%), Gaps = 13/201 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIEGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +++R V REEG A A+EHG +F+E SAKT NVE+ F A E+ ++EG
Sbjct: 118 GNKSDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTA---REIYDKIQEG 174
Query: 187 SNVVKR--NILKQKPENQSPP 205
+ N +K P+N SP
Sbjct: 175 VFDINNEANGIKIGPQN-SPA 194
>gi|226479810|emb|CAX73201.1| RAB2, member RAS oncogene family [Schistosoma japonicum]
Length = 213
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 134/204 (65%), Gaps = 14/204 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +L+ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARLINIDGKQVKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TFT+L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFTHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE F A I + ++EG
Sbjct: 118 GNKSDLESRRDVQKEEGEAFAREHGLVFMETSAKTAANVEDAFINTAKCIHDK---IQEG 174
Query: 187 SNVVKR--NILKQKPENQSPPIGG 208
+ V N +K P + P+GG
Sbjct: 175 ALDVNNEANGIKLGPHHN--PVGG 196
>gi|145539263|ref|XP_001455326.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423125|emb|CAK87929.1| unnamed protein product [Paramecium tetraurelia]
Length = 219
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/180 (49%), Positives = 121/180 (67%), Gaps = 9/180 (5%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT-IGVDFKIKLLTVAGKRLKLT 65
+S YD FK+LLIG SGVGKS +L+ ++ ++ + IGVDFKIK + + K +KL
Sbjct: 5 ESTEYDHLFKLLLIGTSGVGKSCMLMRYVDNNFTNNFYNTIGVDFKIKSIFLENKNIKLQ 64
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS-------TN 118
IWDTAGQ+RFRT+T SYYRGA GII+VYD+T RE+F ++ +W E+D Y+
Sbjct: 65 IWDTAGQDRFRTITCSYYRGAHGIIIVYDITDRESFDSVK-MWMSEIDKYTHGITHRYAQ 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D ++MLVGNK D D +R VS EEG ALAK+ F+E SAK N+EQ F +A ++E
Sbjct: 124 EDVIRMLVGNKCDVDDKRAVSYEEGEALAKQLKLQFIETSAKLSTNIEQSFLTIAKNVLE 183
>gi|464526|sp|Q05975.1|RAB2_LYMST RecName: Full=Ras-related protein Rab-2
gi|288938|emb|CAA51234.1| RAB2 [Lymnaea stagnalis]
Length = 212
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
>gi|221116035|ref|XP_002155975.1| PREDICTED: ras-related protein Rab-1A-like [Hydra magnipapillata]
Length = 202
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 124/208 (59%), Gaps = 18/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +ETF N+ W +E+D Y+ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQETFNNVKQ-WLQEIDRYAC-ESVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +++VV A G FLE SAK NVEQ F +A +I M P +
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGPPQTTADR 182
Query: 187 SNVVKRNILKQKPENQSPPI----GGCC 210
S V P P+ GGCC
Sbjct: 183 SEKV--------PLKSGSPVKPSGGGCC 202
>gi|150865512|ref|XP_001384762.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
gi|149386768|gb|ABN66733.2| GTP-binding protein [Scheffersomyces stipitis CBS 6054]
Length = 207
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 121/177 (68%), Gaps = 9/177 (5%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M + + S SYD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSTRAAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ D W + V ++
Sbjct: 58 SKGKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENV-DNWFQTVTQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
N+D LVGNK D +S R VS+E+G LA + FLE SAK+ ENV+ F +LA
Sbjct: 117 -NEDAQIFLVGNKCDDESNRQVSKEQGQELASKLNIPFLEASAKSNENVDSIFYELA 172
>gi|351714035|gb|EHB16954.1| Ras-related protein Rab-1A, partial [Heterocephalus glaber]
Length = 198
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 2 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 61
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 62 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 119
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 179
Query: 191 KRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 KSNVKIQSTPVKQSG--GGCC 198
>gi|255570958|ref|XP_002526430.1| protein with unknown function [Ricinus communis]
gi|223534210|gb|EEF35925.1| protein with unknown function [Ricinus communis]
Length = 202
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 111/167 (66%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 123 CDLIENKVVDTQTAKAFADELGIPFLETSAKDSINVEQAFLTMAGEI 169
>gi|255587494|ref|XP_002534292.1| protein with unknown function [Ricinus communis]
gi|223525564|gb|EEF28091.1| protein with unknown function [Ricinus communis]
Length = 216
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 131/207 (63%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L + S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKQ--RLADTDSR 187
Query: 189 VVKRNILKQKPE-----NQSPPIGGCC 210
+ I +P+ +Q+ P CC
Sbjct: 188 AEPQTIKINQPDQAGSASQAAPKSACC 214
>gi|17507539|ref|NP_491233.1| Protein UNC-108 [Caenorhabditis elegans]
gi|308485248|ref|XP_003104823.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|308257521|gb|EFP01474.1| CRE-UNC-108 protein [Caenorhabditis remanei]
gi|341876619|gb|EGT32554.1| CBN-UNC-108 protein [Caenorhabditis brenneri]
gi|341895318|gb|EGT51253.1| hypothetical protein CAEBREN_21630 [Caenorhabditis brenneri]
gi|373219190|emb|CCD66422.1| Protein UNC-108 [Caenorhabditis elegans]
Length = 214
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++ R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 167
>gi|221121860|ref|XP_002155452.1| PREDICTED: ras-related protein Rab-2-like [Hydra magnipapillata]
Length = 212
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 137/218 (62%), Gaps = 24/218 (11%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A E+ ++EG
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIGTA---KEIYQKIQEG 174
Query: 187 SNVVKR--NILKQKPEN--QSPPI----------GGCC 210
+ N +K P++ SP GGCC
Sbjct: 175 VFDINNEANGIKIGPQHTSSSPSTISGGAANQQSGGCC 212
>gi|410045431|ref|XP_003313192.2| PREDICTED: ras-related protein Rab-1B isoform 2 [Pan troglodytes]
Length = 269
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 73 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 132
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 133 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 190
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 191 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 249
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 250 ---ERPNLKIDSTPVKPAGGGCC 269
>gi|89258419|gb|ABD65433.1| Rab8 [Suberites domuncula]
Length = 175
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 86/170 (50%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +LV F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDFLFKLLLIGDSGVGKTCILVRFSEDAFNSTFISTIGIDFKIRTVEIEGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIRN-WIRNIE-ENASADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D RVVS E G LA+EHG F+E SAK+ +VE F LA I
Sbjct: 120 GNKCDLHESRVVSMERGRLLAEEHGVKFMETSAKSGTHVETAFLSLAKDI 169
>gi|384482285|pdb|3SFV|A Chain A, Crystal Structure Of The Gdp-Bound Rab1a S25n Mutant In
Complex With The Coiled-Coil Domain Of Lida From
Legionella Pneumophila
Length = 181
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 91/177 (51%), Positives = 119/177 (67%), Gaps = 3/177 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAG 59
+GS S + YD FK+LLIGDSGVGK+ LL+ F + + TIGVDFKI+ + + G
Sbjct: 3 LGSMSSMNPEYDYLFKLLLIGDSGVGKNCLLLRFADDTYTESYISTIGVDFKIRTIELDG 62
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ +
Sbjct: 63 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-E 120
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+ K+LVGNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 121 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 177
>gi|339250788|ref|XP_003374379.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316969320|gb|EFV53438.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 176
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 84/168 (50%), Positives = 121/168 (72%), Gaps = 3/168 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWDT
Sbjct: 6 YDLLFKLLLIGDSGVGKTCILYRFSDDAFNTTFISTIGIDFKIKTIELKGKKIKLQIWDT 65
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF T+T SYYRGA GI+LVYD+T +++F N++ W + ++ +++ +D KML+GNK
Sbjct: 66 AGQERFHTITMSYYRGAMGIMLVYDITNQKSFENITK-WLRNIEEHAS-EDVEKMLLGNK 123
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
D + +R+VS+E G +A +HG FLE SAK + N+++ F LA I+
Sbjct: 124 CDIEEKRMVSKERGEEIAGKHGIRFLETSAKAKINIDKAFYDLAEAIL 171
>gi|431912641|gb|ELK14659.1| Ras-related protein Rab-1A, partial [Pteropus alecto]
Length = 197
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 118
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 119 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 178
Query: 191 KRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 179 KSNVKIQSTPVKQSG--GGCC 197
>gi|389749024|gb|EIM90201.1| GTP-binding protein ypt1 [Stereum hirsutum FP-91666 SS1]
Length = 204
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 96/205 (46%), Positives = 124/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D S++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTSKKVVEYSVAKEFADQLTIPFLETSAKNATNVEQAFLTMAKQIKDRMGSTST 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
S K + + Q GCC
Sbjct: 180 PSGTGKSSTITPGQTVQQQQASGCC 204
>gi|409082456|gb|EKM82814.1| hypothetical protein AGABI1DRAFT_111382 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426200290|gb|EKV50214.1| hypothetical protein AGABI2DRAFT_190604 [Agaricus bisporus var.
bisporus H97]
Length = 204
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 124/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D ++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTGKKVVEYTVAKEFADQLNIPFLETSAKNATNVEQAFLTMAKQIKDRMGSATA 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
+ K + + QS GCC
Sbjct: 180 PTGAAKSSTVTPGQSVQSQQSNGCC 204
>gi|291237662|ref|XP_002738747.1| PREDICTED: RAB1A, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 206
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/208 (48%), Positives = 132/208 (63%), Gaps = 17/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFHNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +++VV A + FLE SAK NVEQ F +A +I M S+ ++G
Sbjct: 126 CDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSMPQDG 185
Query: 187 SNVVKRNILKQKPENQSPPI----GGCC 210
K+N+ K + S P+ GGCC
Sbjct: 186 ----KQNV---KIQGASTPVKQSSGGCC 206
>gi|225714638|gb|ACO13165.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
gi|290562553|gb|ADD38672.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIEGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +++R V REEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|225713134|gb|ACO12413.1| Ras-related protein Rab-2 [Lepeophtheirus salmonis]
Length = 212
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIEGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +++R V REEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLEAKRDVKREEGEAFAREHGLIFMETSAKTAANVEEAFINTAREIYD 169
>gi|224284051|gb|ACN39763.1| unknown [Picea sitchensis]
Length = 216
Score = 169 bits (428), Expect = 6e-40, Method: Compositional matrix adjust.
Identities = 100/217 (46%), Positives = 134/217 (61%), Gaps = 12/217 (5%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGK 60
G + G+++ YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GK
Sbjct: 4 GPARGRAD-YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGK 62
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
R+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ +
Sbjct: 63 RIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-N 120
Query: 121 CVKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
K+LVGNK D D S+R V G ALA E G F E SAKT NVEQ F +A I +
Sbjct: 121 VNKILVGNKADMDESKRAVPTARGQALADEFGIKFFETSAKTNLNVEQVFFTIARDIKQ- 179
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPP-----IGGCCS 211
L E + V + I KP+ P CC+
Sbjct: 180 -RLAESDTKVEPQTIKINKPDPAKGPGKAAERSSCCT 215
>gi|444515602|gb|ELV10933.1| Ras-related protein Rab-1A [Tupaia chinensis]
Length = 205
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/201 (48%), Positives = 126/201 (62%), Gaps = 6/201 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 9 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 68
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 69 GQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNKC 126
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 127 DLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGAE 186
Query: 191 KRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 187 KSNVKIQSTPVKQSG--GGCC 205
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 121/170 (71%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKAYDYLFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT+ +TF N+ + W + ++ +++ +D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKN-WIRNIEQHAS-EDVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D D +RVV++E G LA+E+ F E SAK NVE+ F +A I
Sbjct: 120 GNKCDVDDKRVVTKERGEQLAREYNVRFFETSAKANINVEEAFLTIARDI 169
>gi|399163139|gb|AFP33145.1| rab-2, partial [Caenorhabditis elegans]
Length = 213
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 1 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDGKQIKLQI 58
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 59 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 116
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++ R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 117 GNKSDLEARREVKREEGEAFAREHGLVFMETSAKTAANVEEAFIDTAKEI 166
>gi|168027125|ref|XP_001766081.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162682724|gb|EDQ69140.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 216
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 126/207 (60%), Gaps = 8/207 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEVPSLLE 184
D D S+R V +G ALA E+G F E SAKT NVE F +A ++ E S E
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKQRLAETDSKPE 189
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCCS 211
N L Q P CCS
Sbjct: 190 AAKNAKPDVKLLAGNSQQKPASSSCCS 216
>gi|380023930|ref|XP_003695762.1| PREDICTED: ras-related protein Rab-18-B-like [Apis florea]
Length = 223
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 118/171 (69%), Gaps = 3/171 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
K+L+IG+S VGKSS+++ F +++ T+G+D++ K +T+ G +KL IWDTAGQE
Sbjct: 11 LKLLMIGESNVGKSSIILRFTEDEFHENMQSTVGMDYRTKQVTIDGNTVKLAIWDTAGQE 70
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
RFRTLT SYYR QG ILVYDVT R TF L + W E++ Y D +KM+VGNK+D
Sbjct: 71 RFRTLTPSYYRDGQGAILVYDVTDRITFMKL-ETWLNELNTYCNKTDIIKMVVGNKIDLP 129
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+ R VS EEG+ A+ H +L++E SAKT + ++ CFE+L KI++ P L +
Sbjct: 130 N-REVSTEEGLQFARRHQTLYIESSAKTADGIKCCFEELVQKIIQTPGLWD 179
>gi|351725923|ref|NP_001237621.1| uncharacterized protein LOC100499898 [Glycine max]
gi|255627505|gb|ACU14097.1| unknown [Glycine max]
Length = 201
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 94/170 (55%), Positives = 112/170 (65%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +VV A A E G FLE SAK +VEQ F + +I
Sbjct: 120 GNKSDLVDNKVVDSLTAKAFADELGIPFLETSAKDSISVEQAFLTMTAEI 169
>gi|449455912|ref|XP_004145694.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
gi|449492910|ref|XP_004159138.1| PREDICTED: ras-related protein RABB1b-like [Cucumis sativus]
Length = 211
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDARPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + MLV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLV 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D R VS+EEG AKE+G LFLE SA+T +NVE+ F + A KI++
Sbjct: 118 GNKADLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIKTAAKILQ 169
>gi|301117946|ref|XP_002906701.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108050|gb|EEY66102.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 202
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/209 (45%), Positives = 135/209 (64%), Gaps = 15/209 (7%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKRL 62
N +D+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + + K++
Sbjct: 4 HENPFDMQIKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNIELDNKKV 60
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ +
Sbjct: 61 KLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRASFQSIRN-WVGQIQQHA-DVHVN 118
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
K+L+GNK D ++VVS EEG ALA E+G F E SAK NVE F ++A ++ L
Sbjct: 119 KILIGNKCDMTDDKVVSTEEGQALADEYGVKFFETSAKNNINVEGGFIEIAREVKN--RL 176
Query: 183 LEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
+EEG K ++ L KP +P CC
Sbjct: 177 MEEGGPHKKDSVNLNAKP---APVKKSCC 202
>gi|443693080|gb|ELT94523.1| hypothetical protein CAPTEDRAFT_177262 [Capitella teleta]
Length = 206
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 98/209 (46%), Positives = 127/209 (60%), Gaps = 6/209 (2%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRL 62
+ G + YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + K +
Sbjct: 2 NPGSNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDRKTI 61
Query: 63 KLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCV 122
KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ +
Sbjct: 62 KLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ESVN 119
Query: 123 KMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-VPS 181
K+LVGNK D +++VV A + G FLE SAK NVEQ F +A +I +
Sbjct: 120 KLLVGNKCDLTTKKVVDYTTAKEYADQLGVPFLETSAKNATNVEQAFMTMAAEIKNRMGP 179
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ G + I P Q GGCC
Sbjct: 180 VAAAGDSKPNVKINASTPVKQGG--GGCC 206
>gi|66801519|ref|XP_629685.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|166208507|sp|P36409.2|RAB2A_DICDI RecName: Full=Ras-related protein Rab-2A
gi|60463063|gb|EAL61258.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 207
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 96/212 (45%), Positives = 129/212 (60%), Gaps = 19/212 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K +KL IW
Sbjct: 2 YSFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDNKAIKLQIW 59
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQE FR++T SYYRG+ G +LVYD+TRR+TF +L+ W K+ Y+ N + +L+G
Sbjct: 60 DTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLT-CWLKDARSYA-NSNMTIILIG 117
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D +S+R VS EEG A E+G +FLE SAKT NVE+ F A KI E +++G
Sbjct: 118 NKSDMESKRAVSYEEGRQFADENGLIFLETSAKTASNVEEAFVNTASKIYEK---IQKGD 174
Query: 188 NVVKRNIL---------KQKPENQSPPIGGCC 210
+ KQ +Q P GGCC
Sbjct: 175 FDINNESFGIKLGAPTSKQDGTDQKPAGGGCC 206
>gi|37360618|dbj|BAC98287.1| mKIAA3012 protein [Mus musculus]
Length = 253
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL WDT
Sbjct: 56 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQRWDT 115
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 116 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 173
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 174 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPGATAGGA 233
Query: 190 VKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 234 EKSNVKIQSTPVKQSG--GGCC 253
>gi|111143508|gb|ABH06562.1| small Rab GTPase [Trichomonas vaginalis]
gi|111143526|gb|ABH06563.1| small Rab GTPase [Trichomonas vaginalis]
Length = 200
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 92/204 (45%), Positives = 130/204 (63%), Gaps = 6/204 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISS-SVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YDL FK+L++G+SGVGKS LL+ F +++ TIGVDFKI+ + G ++KL I
Sbjct: 2 SNDYDLLFKVLIVGESGVGKSCLLLRFTEDLFIENYISTIGVDFKIRTIEQEGAKVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFR +T SYY G+ GI++VYD+T R+TF +SD W ++++ N+D K+L+
Sbjct: 62 WDTAGQERFRAITKSYYHGSNGIVVVYDITDRKTFEKISD-WFEQINTSEPNEDSCKILI 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + R VS EEG LA+++ F+E SAK NV+ F+ +A + E G
Sbjct: 121 GNKCDLNESRQVSLEEGEQLARDYNVPFMETSAKDSINVDNLFDLMARAMREKSGKFTTG 180
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
S+ N+ +K QS GCC
Sbjct: 181 SS--NGNVSLKK--GQSIGKKGCC 200
>gi|221482114|gb|EEE20475.1| small GTP-binding protein domain-containing protein [Toxoplasma
gondii GT1]
Length = 230
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/166 (54%), Positives = 113/166 (68%), Gaps = 3/166 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 34 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTVKLQIWDTA 93
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT RE+F N+ + W E+D Y+ + K+LVGNK
Sbjct: 94 GQERFRTITSSYYRGAHGIIIVYDVTDRESFNNVKN-WMMEIDKYAM-EGVSKLLVGNKC 151
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D S+R V+ EEG A F+E SAK NVEQ F +A +I
Sbjct: 152 DLTSKRTVTYEEGKEFADSCNMRFIETSAKNAHNVEQAFHIMASEI 197
>gi|123708078|ref|NP_001074105.1| multiple EGF-like-domains 8 [Danio rerio]
gi|120537782|gb|AAI29422.1| Zgc:158741 [Danio rerio]
gi|182891058|gb|AAI64972.1| Zgc:158741 protein [Danio rerio]
Length = 184
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 86/171 (50%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELNGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITSEKSFENIKN-WIRNIEEHASS-DVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + R VS+E G LA ++G FLE SAKT NVE+ F LA IM
Sbjct: 120 GNKCDMNERRQVSKERGEKLAIDYGIKFLETSAKTSINVEEAFFTLARDIM 170
>gi|397605930|gb|EJK59155.1| hypothetical protein THAOC_20656 [Thalassiosira oceanica]
Length = 206
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 101/210 (48%), Positives = 133/210 (63%), Gaps = 15/210 (7%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKRLK 63
S +YD+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + V GKR+K
Sbjct: 5 SAAYDMQVKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNVEVDGKRIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ + K
Sbjct: 62 LQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-DVHVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D E+VVS EEG LAKE G F ECSAK NVE F +A + + L+
Sbjct: 120 ILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKD--RLM 177
Query: 184 EEGSNVVKRNILKQKPENQSPPIG---GCC 210
++G Q N P G GCC
Sbjct: 178 KDGGGAGPAKKGVQLGRN-DPAAGNRKGCC 206
>gi|226472644|emb|CAX71008.1| Rab-protein 8 [Schistosoma japonicum]
Length = 197
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 98/201 (48%), Positives = 127/201 (63%), Gaps = 9/201 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLIRFADESFSETYISTIGVDFKIRTIDLDGKVVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGII+VY VT + +F N+ W +E++ Y+ N ++LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAQGIIIVY-VTDKTSFINVKS-WLQEIEHYA-NSTVNRLLVGNK 121
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V + + AKEH FLE SAK NVE F ++A +I + ++ S+
Sbjct: 122 CDLPKSRAVDTVDAMNFAKEHQMPFLETSAKEAINVEDAFMEMARQIKASTAPMQSMSSN 181
Query: 190 VKRNILKQKPENQSPPIGGCC 210
V N +P +S GGCC
Sbjct: 182 VTVN--STQPVTKS---GGCC 197
>gi|255730689|ref|XP_002550269.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
gi|240132226|gb|EER31784.1| GTP-binding protein ypt1 [Candida tropicalis MYA-3404]
Length = 207
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/170 (53%), Positives = 114/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKSSLL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSSLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|126338784|ref|XP_001365286.1| PREDICTED: ras-related protein Rab-1B-like [Monodelphis domestica]
Length = 201
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E++ Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLEEINRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNPTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSSPVKPASGGCC 201
>gi|449492192|ref|XP_004175545.1| PREDICTED: ras-related protein Rab-18 isoform 2 [Taeniopygia
guttata]
Length = 170
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 83/144 (57%), Positives = 105/144 (72%), Gaps = 2/144 (1%)
Query: 44 PTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTN 103
P GVDFK+K ++V G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF
Sbjct: 2 PISGVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVK 61
Query: 104 LSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRE 163
L D W E++ Y T D V+MLVGNK+D+++ R V R EG+ A++H LF+E SAKT +
Sbjct: 62 L-DNWLNELETYCTRNDIVQMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCD 119
Query: 164 NVEQCFEQLALKIMEVPSLLEEGS 187
V+ FE+L KI++ P L E S
Sbjct: 120 GVQCAFEELVEKIIQTPGLWESES 143
>gi|29841055|gb|AAP06068.1| similar to GenBank Accession Number S38340 membrane associated GTP
binding protein RAB18 in Caenorhabditis briggsae
[Schistosoma japonicum]
Length = 189
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 89/176 (50%), Positives = 120/176 (68%), Gaps = 4/176 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVA-GKRLKLTIWDTA 70
++FK+LLIGDSGVGKSSLL+ + + + LS TIGVDFK+KL+TV G ++KL+IWDTA
Sbjct: 10 INFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKLVTVPDGTKIKLSIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLT + YRG+ + VYDV RE+F NL + +E+ YS N + +K+LVGNK+
Sbjct: 70 GQERFRTLTPNVYRGSHAAVFVYDVANRESFDNLK-IRMEELKTYSDNPNMIKLLVGNKI 128
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
D R++SREEG+ A+ + + E SAKT E V Q F + KI L +G
Sbjct: 129 D-SVPRLISREEGLRFARLYNMPYAETSAKTSEGVNQLFSDIVTKIFNHSELWNQG 183
>gi|405950969|gb|EKC18921.1| Ras-related protein Rab-2 [Crassostrea gigas]
Length = 211
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
>gi|444319260|ref|XP_004180287.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
gi|387513329|emb|CCH60768.1| hypothetical protein TBLA_0D02650 [Tetrapisispora blattae CBS 6284]
Length = 217
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 123/180 (68%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG + +YD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNAKNYDSIMKILLIGDSGVGKSCLLVRFVD---DKFNPSFITTIGIDFKIKTIDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W K V+ ++ N
Sbjct: 66 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDENTFENIR-TWFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ R V+ E+G +LAKE G F+E SAK +NV + F L I E
Sbjct: 124 GEAQLLLVGNKSDMET-RTVTYEQGESLAKELGIPFIESSAKDDKNVNEIFFTLTNLIQE 182
>gi|428184966|gb|EKX53820.1| hypothetical protein GUITHDRAFT_150303 [Guillardia theta CCMP2712]
Length = 200
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 102/207 (49%), Positives = 123/207 (59%), Gaps = 12/207 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S+ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ L + GK +KL I
Sbjct: 2 SSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTLELDGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ N KMLV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WMNEIDRYA-NDKVNKMLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLL 183
GNK D S+R V A G FLE SAK NVEQ F +A +I M
Sbjct: 120 GNKSDLASKRAVDTSVAKEYADSLGIPFLETSAKDSTNVEQAFITMAAEIKARMAQAPAG 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
+EGS + Q + GCC
Sbjct: 180 KEGSASI------QVGKGSEVTKKGCC 200
>gi|393231749|gb|EJD39338.1| GTP-binding protein ypt1 [Auricularia delicata TFB-10046 SS5]
Length = 204
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 123/205 (60%), Gaps = 3/205 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HASEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDMDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEE 185
VGNK D +++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTAKKVVEYGAAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKDRMGATST 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
K + Q GGCC
Sbjct: 180 SQGTGKGVTVTAGQSVQQQSGGGCC 204
>gi|26335369|dbj|BAC31385.1| unnamed protein product [Mus musculus]
Length = 168
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|449530081|ref|XP_004172025.1| PREDICTED: ras-related protein RABD1-like isoform 1 [Cucumis
sativus]
Length = 191
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/166 (56%), Positives = 111/166 (66%), Gaps = 3/166 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 10 DYLFKLLLIGDSSVGKSCLLLRFADDSYVDSYISTIGVDFKIRTVELDGKTIKLQIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+ + C K+LVGNK
Sbjct: 70 GQERFRTITSSYYRGAHGIIIVYDVTEMESFNNVKQ-WLNEIDRYANDSVC-KLLVGNKC 127
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +VV + A A E G FLE SAK NVEQ F +A +I
Sbjct: 128 DLVENKVVDTQTAKAFADELGIPFLETSAKDSTNVEQAFLTMAAEI 173
>gi|168049674|ref|XP_001777287.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162671389|gb|EDQ57942.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 96/216 (44%), Positives = 133/216 (61%), Gaps = 9/216 (4%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
++ ++++YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + KR
Sbjct: 2 ATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKR 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ +
Sbjct: 62 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 119
Query: 122 VKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---M 177
K+LVGNK D D S+R V +G ALA E+G F E SAKT NVE F +A I +
Sbjct: 120 NKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKTRL 179
Query: 178 EVPSLLEEGSNVVKRNILKQKP--ENQSPPIGGCCS 211
+ N + +K P Q P G CCS
Sbjct: 180 AESDSKPDAKNAAGKPDVKLTPGGAQQKPASGSCCS 215
>gi|218195930|gb|EEC78357.1| hypothetical protein OsI_18114 [Oryza sativa Indica Group]
gi|222629897|gb|EEE62029.1| hypothetical protein OsJ_16811 [Oryza sativa Japonica Group]
Length = 206
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 110/160 (68%), Gaps = 3/160 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDS VGKS LL+ F S +D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ C K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF 169
D +VV EE A A+ G FLE SAK NVE+ F
Sbjct: 123 CDLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 162
>gi|224012645|ref|XP_002294975.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
gi|220969414|gb|EED87755.1| rab-type small G protein [Thalassiosira pseudonana CCMP1335]
Length = 213
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 93/210 (44%), Positives = 130/210 (61%), Gaps = 18/210 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK++LIGDSGVGKS LL+ F + + TIGVDF+ + + + K +KL IWDT
Sbjct: 12 YDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKMGKKTVKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII+VYD T ++F +++D W KEV+ Y++ C K+LVGNK
Sbjct: 72 AGQERFRTITSAYYRGADGIIMVYDTTSSDSFDHVND-WLKEVNRYASEGTC-KLLVGNK 129
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
DR ++R V+ E+ A + G FLE SAKT +NVE+ F +A L+++
Sbjct: 130 SDRTADRAVTTEQAKEFADDLGVAFLETSAKTAKNVEEAFLTMA------GELIKQREAK 183
Query: 190 VKRNILKQKPENQS---------PPIGGCC 210
+ N K ++Q +GGCC
Sbjct: 184 IAANGGDGKSDSQGKVSLTSEKKAALGGCC 213
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 121/172 (70%), Gaps = 3/172 (1%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
SSS + YD FK++LIGDSGVGKS LL+ F + + TIGVDF+ + + + K
Sbjct: 4 SSSSKQRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKIDKKT 63
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+TS+YYRGA GII+V+DVT ++F +++D W KEV+ Y+ +
Sbjct: 64 VKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVND-WLKEVNRYAA-EGT 121
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
VK+LVGNK DR ++RVV+ E+ A E G F+E SAK+ +NVE+ F +A
Sbjct: 122 VKLLVGNKSDRTADRVVTEEQAREFADELGIPFIETSAKSAKNVEEAFLTMA 173
>gi|50550177|ref|XP_502561.1| YALI0D08162p [Yarrowia lipolytica]
gi|49648429|emb|CAG80749.1| YALI0D08162p [Yarrowia lipolytica CLIB122]
Length = 202
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/169 (55%), Positives = 112/169 (66%), Gaps = 3/169 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ L + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTLELEGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT ++TF N+ W E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFNNVK-TWFHEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D ++VV A G FLE SAK NVEQ F +A +I E
Sbjct: 123 SDITDKKVVEYTVAKEFADSLGIPFLETSAKNATNVEQAFLTMARQIKE 171
>gi|388498284|gb|AFK37208.1| unknown [Medicago truncatula]
Length = 203
Score = 169 bits (427), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 124/203 (61%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+ LIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLPLIGDSGVGKSCLLLRFADDSYIDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R VS + A + G F+E SAK NVE F +A I + + +N
Sbjct: 123 SDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEGAFMAMAAAIKDRMASQPSANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 RPPTVQIRGQPVGQK---SGCCS 202
>gi|260949313|ref|XP_002618953.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
gi|238846525|gb|EEQ35989.1| GTP-binding protein YPTC1 [Clavispora lusitaniae ATCC 42720]
Length = 206
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F ++ D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADNTYTQDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A+ FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTTAKEFAEALDIPFLETSALSSSNVEQAFYTMARQI 169
>gi|326506496|dbj|BAJ86566.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 203
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/167 (54%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDLDSFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D ++VVS E A A E G F+E SAK NVEQ F ++ I
Sbjct: 123 CDLTDKKVVSYETAKAFADEIGIPFMETSAKNALNVEQAFMAMSASI 169
>gi|326921616|ref|XP_003207053.1| PREDICTED: putative Rab-43-like protein ENSP00000330714-like
[Meleagris gallopavo]
Length = 332
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 82/138 (59%), Positives = 103/138 (74%), Gaps = 2/138 (1%)
Query: 47 GVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSD 106
GVDFK+K ++V G + KL IWDTAGQERFRTLT SYYRGAQG+ILVYDVTRR+TF L D
Sbjct: 168 GVDFKVKTISVDGNKAKLAIWDTAGQERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-D 226
Query: 107 VWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVE 166
W E++ Y T D VKMLVGNK+D+++ R V R EG+ A++H LF+E SAKT + V+
Sbjct: 227 NWLNELETYCTRNDIVKMLVGNKIDKEN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQ 285
Query: 167 QCFEQLALKIMEVPSLLE 184
FE+L KI++ P L E
Sbjct: 286 CAFEELVEKIIQTPGLWE 303
>gi|410077807|ref|XP_003956485.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
gi|372463069|emb|CCF57350.1| hypothetical protein KAFR_0C03580 [Kazachstania africana CBS 2517]
Length = 212
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/194 (47%), Positives = 127/194 (65%), Gaps = 5/194 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+SGVGKS LL+ F + +D TIGVDFKIK + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGNSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRG+ GII+VYDVT +E+F + +W +E+D Y+T+ +K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGSHGIIIVYDVTDQESFNGVK-MWLQEIDRYATSA-VLKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME--VPSLLEEGS 187
D D +R+V + A+ + FLE SA NVE+ F +A +I E +++GS
Sbjct: 123 CDLDGKRMVEYDVAKEFAESNNMPFLETSALDSTNVEEAFLTMARQIKESFAQQKIQDGS 182
Query: 188 NVVKRNILKQKPEN 201
N + L+ N
Sbjct: 183 NANANSNLQNDKSN 196
>gi|156371397|ref|XP_001628750.1| predicted protein [Nematostella vectensis]
gi|156215735|gb|EDO36687.1| predicted protein [Nematostella vectensis]
Length = 212
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 133/203 (65%), Gaps = 12/203 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF----EQLALKIMEVPSL 182
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F +++ KI E
Sbjct: 118 GNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQKIQEGVFD 177
Query: 183 LEEGSNVVKRNILKQKPENQSPP 205
+ +N +K + P N S P
Sbjct: 178 INNEANGIKLG-PQHSPSNPSMP 199
>gi|146422886|ref|XP_001487377.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
gi|146388498|gb|EDK36656.1| GTP-binding protein YPTC1 [Meyerozyma guilliermondii ATCC 6260]
Length = 207
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 124/208 (59%), Gaps = 7/208 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDFLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----MEVPSL 182
GNK D +++V A FLE SA + NVEQ F +A +I S
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQIKAQMTNNASS 179
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCC 210
G+N K N+ + S CC
Sbjct: 180 GAGGANASKSNVNLRGQSLTSNQSNSCC 207
>gi|196008991|ref|XP_002114361.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
gi|190583380|gb|EDV23451.1| hypothetical protein TRIADDRAFT_50496 [Trichoplax adhaerens]
Length = 205
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 131/203 (64%), Gaps = 7/203 (3%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FKILLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKILLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T+R++F N++ W + +D +++ +D K+++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDLTQRKSFENINK-WIRNIDEHAS-KDVEKIILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGS 187
KVD +R V + E LA+ H F+E SAKT N++ F LA I+ ++P + S
Sbjct: 123 KVDEADKREVLKSEAEELARIHSIRFMETSAKTNINIDAAFLGLANDILNKMPGKRSQAS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+ + NQ GCC
Sbjct: 183 ETISIQNHSRPNSNQKR---GCC 202
>gi|123417386|ref|XP_001305092.1| GTP-binding protein YPTM2 [Trichomonas vaginalis G3]
gi|62869549|gb|AAX97495.1| small Rab GTPase Rab1a [Trichomonas vaginalis]
gi|72537672|gb|AAZ73762.1| small Rab GTPase [Trichomonas vaginalis]
gi|72537674|gb|AAZ73763.1| small Rab GTPase [Trichomonas vaginalis]
gi|121886589|gb|EAX92162.1| GTP-binding protein YPTM2, putative [Trichomonas vaginalis G3]
Length = 202
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/206 (47%), Positives = 131/206 (63%), Gaps = 9/206 (4%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+L+IG+SGVGKS LL+ F D+ TIGVDFKI+ + + GK +KL I
Sbjct: 3 ANDYDYLFKVLIIGNSGVGKSCLLLRFAEDMFSDNYISTIGVDFKIRKIELDGKSIKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T SYYRG+ GI++VYD+T R++F + W E+D +++ QD ++LV
Sbjct: 63 WDTAGQERFRTITKSYYRGSNGIVVVYDITNRDSFEQVQH-WMSEIDNHAS-QDVCRLLV 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D +R V EEG ALA++ G F+E SAK NVE F +A + +V +
Sbjct: 121 GNKADL-PDRAVKTEEGEALARQFGIPFMETSAKESLNVENMFITMATSMKKKVGGMAAS 179
Query: 186 G-SNVVKRNILKQKPENQSPPIGGCC 210
G SN + I K + NQ GCC
Sbjct: 180 GSSNGGQVTIAKGQSVNQKS---GCC 202
>gi|226486|prf||1515250A rab1B protein
Length = 201
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK GGCC
Sbjct: 182 ---ERPNLKIDSTPVKSASGGCC 201
>gi|256071955|ref|XP_002572303.1| rab-18 [Schistosoma mansoni]
gi|353229802|emb|CCD75973.1| putative rab-18 [Schistosoma mansoni]
Length = 211
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 132/206 (64%), Gaps = 11/206 (5%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVA-GKRLKLTIWDTA 70
++FK+LLIGDSGVGKSSLL+ + + + LS TIGVDFK+K +TV G ++KL+IWDTA
Sbjct: 10 VNFKLLLIGDSGVGKSSLLMRYTNDCFESQLSATIGVDFKVKHVTVPDGTKIKLSIWDTA 69
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLT + YRG+ + V+DV+ RE+F +L+ W +E+ YS N D +K+LVGNK+
Sbjct: 70 GQERFRTLTPNVYRGSHAAVFVFDVSNRESFDHLNS-WMEELKTYSDNPDMIKLLVGNKI 128
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG---- 186
D S R +SREEG+ ++ + + E SAKT E V Q F + +I L +G
Sbjct: 129 DNIS-REISREEGLRFSRLYNMPYAETSAKTSEGVNQLFSDVVTRIYNHSELWNQGKKRA 187
Query: 187 -SNVVKRNILKQKPENQSPPIGGCCS 211
+N R L + + Q+ CCS
Sbjct: 188 NTNSSSRAHLTELEDKQTR--SSCCS 211
>gi|229596300|ref|XP_001011511.3| Ras family protein [Tetrahymena thermophila]
gi|225565488|gb|EAR91266.3| Ras family protein [Tetrahymena thermophila SB210]
gi|307777758|dbj|BAJ21275.1| Rab-family small GTPase Rab1B [Tetrahymena thermophila]
Length = 212
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/206 (43%), Positives = 128/206 (62%), Gaps = 4/206 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
QS YD FK++LIG+SGVGKS +L+ + ++ + TIGVDFKIK + + GK++KL
Sbjct: 9 QSQEYDHLFKLVLIGNSGVGKSCMLMRYAENTFTQNFYNTIGVDFKIKTINLQGKQIKLQ 68
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQ+RF+T+T++YYRGA GI++VYDVT + +F N+ W E++ Y+ C K+L
Sbjct: 69 IWDTAGQDRFKTITTNYYRGAHGIVVVYDVTDKLSFENVK-TWMSEIEKYAQENVC-KLL 126
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLE 184
+GNK D +RVVS EEG LA F+E SAK N++ FE +A ++ + +
Sbjct: 127 IGNKSDLSDKRVVSTEEGQQLASSLKIKFIETSAKNSNNIDSAFESMAQDVLIRISDIKT 186
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCC 210
+ N +R Q Q GCC
Sbjct: 187 QQDNERRRLKPGQNVSEQKSSSEGCC 212
>gi|149246283|ref|XP_001527611.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146447565|gb|EDK41953.1| GTP-binding protein SAS1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 208
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 122/182 (67%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSSKGSSSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTID 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++
Sbjct: 58 SKGKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDARSFENVQN-WFQTVSQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N++ LVGNK D + R VSRE+G LA++ FLE SAKT +NVE F +LA I
Sbjct: 117 -NEEAQIFLVGNKCDDEENRQVSREQGEELAQKLQIPFLEASAKTNQNVESIFYELAGII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|54696256|gb|AAV38500.1| RAB2, member RAS oncogene family [synthetic construct]
gi|61368765|gb|AAX43233.1| RAB2 member RAS oncogene family [synthetic construct]
Length = 213
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 119/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D + R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLEFRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>gi|334314630|ref|XP_001379530.2| PREDICTED: ras-related protein Rab-2B-like [Monodelphis domestica]
Length = 272
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|340519584|gb|EGR49822.1| secretion-related GTPase [Trichoderma reesei QM6a]
Length = 203
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 120/171 (70%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F+N+ W + V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFSNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N++Q F LA I
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 171
>gi|147903729|ref|NP_001090677.1| RAB8B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|117558080|gb|AAI27331.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 207
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 123/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VSRE+G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|268555746|ref|XP_002635862.1| C. briggsae CBR-RAB-1 protein [Caenorhabditis briggsae]
gi|308488626|ref|XP_003106507.1| CRE-RAB-1 protein [Caenorhabditis remanei]
gi|308253857|gb|EFO97809.1| CRE-RAB-1 protein [Caenorhabditis remanei]
Length = 205
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +ETF N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++R V + A + G FLE SAK+ NVEQ F +A +I ++
Sbjct: 126 CDLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGA 185
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P Q GCC
Sbjct: 186 PGVRITGSQPV-QDKKSSGCC 205
>gi|225710014|gb|ACO10853.1| Ras-related protein ORAB-1 [Caligus rogercresseyi]
Length = 201
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F NL VW +E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQDSFNNLK-VWLQEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A + FLE SAK NVEQ F +A +I P S
Sbjct: 123 CDLTTKKVVDYTTAKEYADQSSMPFLEASAKNATNVEQAFMTMAAEIKNTVGPPAPSGAS 182
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
VK + P QS GCC
Sbjct: 183 GQVK---IDSTPV-QSKSGSGCC 201
>gi|329185063|ref|NP_001002129.2| ras-related protein-like [Danio rerio]
gi|66911050|gb|AAH97013.1| Zgc:86773 protein [Danio rerio]
Length = 201
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/201 (47%), Positives = 126/201 (62%), Gaps = 5/201 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS +L+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W KE+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLKEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I + G +
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGGSE 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
++ P QS GGCC
Sbjct: 183 KPDLKIESTPVQQSG--GGCC 201
>gi|19115492|ref|NP_594580.1| GTPase Ypt2 [Schizosaccharomyces pombe 972h-]
gi|141305|sp|P17609.1|YPT2_SCHPO RecName: Full=GTP-binding protein ypt2; AltName: Full=SEC4 homolog
gi|5144|emb|CAA36707.1| unnamed protein product [Schizosaccharomyces pombe]
gi|5150|emb|CAA37045.1| unnamed protein product [Schizosaccharomyces pombe]
gi|2414662|emb|CAB16405.1| GTPase Ypt2 [Schizosaccharomyces pombe]
Length = 200
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 123/173 (71%), Gaps = 9/173 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ SYD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 3 TKSYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRIK 59
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+L+YDVT +++F N+ W V+ +++ ++ K
Sbjct: 60 LQIWDTAGQERFRTITTAYYRGAMGILLLYDVTDKKSFDNVR-TWFSNVEQHAS-ENVYK 117
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+L+GNK D + +R VS E+G ALA E G FLE SAKT NV++ F LA +I
Sbjct: 118 ILIGNKCDCEDQRQVSFEQGQALADELGVKFLEASAKTNVNVDEAFFTLAREI 170
>gi|308044223|ref|NP_001183904.1| uncharacterized protein LOC100502497 [Zea mays]
gi|238015358|gb|ACR38714.1| unknown [Zea mays]
Length = 214
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 128/205 (62%), Gaps = 9/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDFLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLSESDSK 187
Query: 189 VVKRNILKQKP---ENQSPPIGGCC 210
R I +P E + CC
Sbjct: 188 PEDRTISINRPDGGEASASQKSACC 212
>gi|343424907|emb|CBQ68445.1| probable GTP-binding protein ypt1 [Sporisorium reilianum SRZ2]
Length = 208
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
+G S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 AGLSADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y+ + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAC-EGVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A + FLE SAK+ NVEQ F +A +I +
Sbjct: 120 LLVGNKSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSS 179
Query: 184 EEGSNVVKRNILK----QKPENQSPPIGGCC 210
+ ++ LK Q QS GGCC
Sbjct: 180 TVNNQAGGKSTLKVGAGQNVSQQSA--GGCC 208
>gi|290980783|ref|XP_002673111.1| rab family small GTPase [Naegleria gruberi]
gi|284086692|gb|EFC40367.1| rab family small GTPase [Naegleria gruberi]
Length = 212
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 132/215 (61%), Gaps = 19/215 (8%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQVKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S N MLV
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFHHLT-TWLEDARRHS-NSTMTIMLV 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF--------EQLALKIME 178
GNK D DS R VS EEG A++H +FLE SAK ENVE+ F E++ I++
Sbjct: 118 GNKCDLDSRRAVSYEEGKKFAQQHDLIFLETSAKNDENVEEAFNYTARIINEKIEKGIID 177
Query: 179 VPSLL---EEGSNVVKRNILKQKPENQSPPIGGCC 210
V + + + G+ L +KP S P G CC
Sbjct: 178 VTNEMNGVKVGNAPTATTNLLEKP-TTSEPKGKCC 211
>gi|184186107|ref|NP_001116975.1| GTPase homolog [Strongylocentrotus purpuratus]
Length = 207
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T +++F N+ + W + ++ +++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNQKSFDNIRN-WIRNIEEHAS-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D D R VS+E+G LA E+G F+E SAK NVE+ F LA I
Sbjct: 120 GNKCDMDDRRAVSKEKGEQLAIEYGIKFMETSAKASINVEEAFVTLARDI 169
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGK+ L++ F + + TIG+DFK+K + V GK++KL +
Sbjct: 2 AKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T +++ N+ + W K + + + +ML+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSYENIQN-WMKSIK-ENASAGVSRMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D +++R VS+E G LAKEHG F E SAK+ NVE+ F LA I+
Sbjct: 120 GNKCDIEAKRKVSKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDIL 170
>gi|227603|prf||1707300A guanine nucleotide binding protein
Length = 208
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 101/211 (47%), Positives = 127/211 (60%), Gaps = 12/211 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ + V GK +KL I
Sbjct: 2 SNEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTVEVEGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E+D Y+ N +LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLDEIDRYA-NDSVRNVLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV-----PS 181
GNK D R V A A+E G FLE SAK NVE+ F ++ I + +
Sbjct: 120 GNKCDLAENRAVDTSVAQAYAQEVGIPFLETSAKESINVEEAFLAMSAAIKKSKAGSQAA 179
Query: 182 LLEEGSNVVKRNILKQKP-ENQSPPIGGCCS 211
L + SNVV+ +K +P + + CCS
Sbjct: 180 LERKPSNVVQ---MKGRPIQQEQQKSSRCCS 207
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 131/204 (64%), Gaps = 10/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +++VV A + G FLE SAK+ NVEQ F +A +I + PS +
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
++ VK I + +P + P GCC
Sbjct: 186 ASKVK--IDQGRPVEK--PNSGCC 205
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 81/171 (47%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ L++ F S ++ TIG+DFKI+ + V GK++KL +
Sbjct: 2 AKAYDHLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + ++L+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVERLLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D +++R V +E+ + LA+EHG F E SAK+ NV++ F LA I+
Sbjct: 120 GNKCDMEAKRKVQKEQAVKLAREHGIRFFETSAKSSTNVDEAFSSLARDIL 170
>gi|164660430|ref|XP_001731338.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
gi|159105238|gb|EDP44124.1| hypothetical protein MGL_1521 [Malassezia globosa CBS 7966]
Length = 229
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/200 (45%), Positives = 128/200 (64%), Gaps = 5/200 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSV--DDLSPTIGVDFKIKLLTVAGKRLKLTIWDTAG 71
+ K+LLIG SGVGKS+L+ + +D + TIGVD+KIK L V GK KL+IWDTAG
Sbjct: 12 TLKLLLIGSSGVGKSALVRRYTDDVFVEEDAAATIGVDYKIKSLCVDGKWFKLSIWDTAG 71
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QER+RTLTSSYYRGAQG++++YDVT ++ ++ W E+ + + V +L GNKVD
Sbjct: 72 QERYRTLTSSYYRGAQGVVILYDVTDLRSYEDVPQ-WVHELRTFEGDVPPVCLLAGNKVD 130
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVK 191
ER VS E+G A A+E+G LF+ECSAK + V+ F++L K++ P+L + V+
Sbjct: 131 IAEERQVSTEQGQAYAQENGMLFVECSAKAGQGVDHAFDELVRKVVSTPALWLHVAPGVR 190
Query: 192 RNILKQKPENQSPPIGGCCS 211
R + +P GG S
Sbjct: 191 RP--GDRIPGGAPDAGGTIS 208
>gi|348538473|ref|XP_003456715.1| PREDICTED: ras-related protein Rab-1A-like isoform 1 [Oreochromis
niloticus]
Length = 203
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 122/201 (60%), Gaps = 3/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATAGGG 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
K N+ GGCC
Sbjct: 183 EKPNVKLTPGTTVKTSSGGCC 203
>gi|255570175|ref|XP_002526048.1| protein with unknown function [Ricinus communis]
gi|223534629|gb|EEF36325.1| protein with unknown function [Ricinus communis]
Length = 211
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 98/214 (45%), Positives = 132/214 (61%), Gaps = 16/214 (7%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDSRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-----VPS 181
GNK D R VS+EEG AKE+G LFLE SA+T +NVE+ F + A KI++ V
Sbjct: 118 GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQNIQEGVFD 177
Query: 182 LLEEGSNVVKRNILKQKP----ENQSPPIGGCCS 211
+ E S + Q P + GGCCS
Sbjct: 178 VSNESSGIKVGYGRPQGPSGSRDGAVAQRGGCCS 211
>gi|51468998|emb|CAH17999.1| RAB1-like [Poa pratensis]
Length = 203
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 96/203 (47%), Positives = 127/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTMKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +++F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VVS E A A E G F+E S K NV Q F ++ I + + +N
Sbjct: 123 CDLTDKKVVSYETAKAFADEIGIPFMETSLKNALNVGQAFMAMSASIKDRMASQPAANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q G CCS
Sbjct: 183 RPATVQIRGQPVEQK---GSCCS 202
>gi|358393423|gb|EHK42824.1| secretion related small GTPase SRG1 [Trichoderma atroviride IMI
206040]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 8 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 64
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFANIR-TWFQNVEQHAT-EGVNKIL 122
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N++Q F LA I
Sbjct: 123 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 173
>gi|47211161|emb|CAF92536.1| unnamed protein product [Tetraodon nigroviridis]
Length = 247
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 94/192 (48%), Positives = 125/192 (65%), Gaps = 7/192 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV + A G FLE SAK+ NVEQ F +A E+ + G+
Sbjct: 123 CDLTTKKVVDYTTAKSFADNLGIPFLETSAKSSTNVEQAFMTMA---AEIKKRMGPGATA 179
Query: 190 VK-RNILKQKPE 200
R + +Q PE
Sbjct: 180 GGLREVQRQNPE 191
>gi|395507954|ref|XP_003758282.1| PREDICTED: ras-related protein Rab-1A [Sarcophilus harrisii]
Length = 329
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 131/212 (61%), Gaps = 9/212 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAG 59
+G+ G S D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + G
Sbjct: 125 LGAPPGCS---DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDG 181
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K +KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ +
Sbjct: 182 KTIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-E 239
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
+ K+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 240 NVNKLLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKR 299
Query: 180 PSLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 300 MGPGATAGGAEKSNVKIQSTPVKQSS--GGCC 329
>gi|391337939|ref|XP_003743321.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 90/174 (51%), Positives = 118/174 (67%), Gaps = 3/174 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SFREDQYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+ YDVT +E+F N+ W +E+D Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+LVGNK D +++VV AK+ FLE SAK NVEQ F+++A IM
Sbjct: 120 LLVGNKCDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM 173
>gi|147905945|ref|NP_001087181.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|50604253|gb|AAH78133.1| Rab8b-prov protein [Xenopus laevis]
Length = 207
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 133/202 (65%), Gaps = 17/202 (8%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + +R VSRE+G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEGFFTLARDIM--------- 170
Query: 187 SNVVKRNILKQKPENQSPPIGG 208
K N ++ EN SP GG
Sbjct: 171 ---TKLN--RKMNENVSPGGGG 187
>gi|18447917|dbj|BAB84324.1| ras-related protein RAB8-3 [Nicotiana tabacum]
Length = 216
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 97/207 (46%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ--RLAESDSK 187
Query: 189 VVKRNILKQKPE-----NQSPPIGGCC 210
+ I +P+ +QS CC
Sbjct: 188 AEPQTIRINQPDQAAGASQSVQKSACC 214
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGK+ L++ F + + TIG+DFK+K + V GK++KL +
Sbjct: 2 AKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + +ML+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVSRMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
GNK D +++R VS+E G LAK+HG F E SAK+ NVE+ F LA I++ S
Sbjct: 120 GNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSS 174
>gi|140832723|gb|AAI35799.1| rab8b protein [Xenopus (Silurana) tropicalis]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 85/169 (50%), Positives = 122/169 (72%), Gaps = 3/169 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL IWD
Sbjct: 2 TYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++GN
Sbjct: 62 TAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMILGN 119
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
K D + +R VSRE+G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 KCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 168
>gi|67470746|ref|XP_651336.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|13537429|dbj|BAB40669.1| small GTPase Rab1A [Entamoeba histolytica]
gi|56468058|gb|EAL45948.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708204|gb|EMD47708.1| small GTPase Rab1A, putative [Entamoeba histolytica KU27]
Length = 205
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 95/195 (48%), Positives = 123/195 (63%), Gaps = 20/195 (10%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTA 65
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGAQGII+VY V +TF N+ W +E++ Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D D ER V+ E+G LA F+E SAK NV++ F ++A IM
Sbjct: 124 DLDDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIRIATDIM------------- 170
Query: 191 KRNILKQKPENQSPP 205
+NI +P N S P
Sbjct: 171 -KNI---QPANTSKP 181
>gi|358058905|dbj|GAA95303.1| hypothetical protein E5Q_01960 [Mixia osmundae IAM 14324]
Length = 218
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 93/177 (52%), Positives = 121/177 (68%), Gaps = 11/177 (6%)
Query: 15 FKILLIGDSGVGKSSLLVSF---ISSSVDDLSPTIGVDFKIKLL--TVAG----KRLKLT 65
K+LLIG S VGKSSLL F + +S + + T+GVD K+KL+ T G K KL
Sbjct: 11 LKLLLIGSSSVGKSSLLTRFTDEVFASDGESAATVGVDMKVKLVKRTPPGQSTAKTYKLA 70
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
+WDTAGQERFRTLTSSYYRGA G+I+VYDV RETF NL D W +E++ + N D V+++
Sbjct: 71 LWDTAGQERFRTLTSSYYRGAHGVIVVYDVANRETFVNL-DTWFQELETFCHN-DIVRIV 128
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
VGNK D++ R+V+ EEG A + G LF+ECSAK +NVE F+ + KI+E P L
Sbjct: 129 VGNKTDKEFARMVTAEEGQAWSDSRGCLFMECSAKQGKNVESLFDTVIDKIIENPRL 185
>gi|384253262|gb|EIE26737.1| small rab-related GTPase [Coccomyxa subellipsoidea C-169]
Length = 213
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D R V+ EEG AKEHG +FLE SAKT NVE+ F A KI E
Sbjct: 118 GNKSDLTHRRAVTTEEGEQFAKEHGLVFLETSAKTAHNVEEAFINTARKIYE 169
>gi|402591657|gb|EJW85586.1| member Ras oncogene family RAB1A [Wuchereria bancrofti]
Length = 205
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V A + G FLE SAK+ NVEQ F +A +I +++
Sbjct: 126 CDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGTG 185
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P N+ GGCC
Sbjct: 186 PSVRIGGSQPVNEKKS-GGCC 205
>gi|326490445|dbj|BAJ84886.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326491645|dbj|BAJ94300.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 214
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 96/206 (46%), Positives = 128/206 (62%), Gaps = 11/206 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W K ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIKNIEQHASD-NVSKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A ++ L E +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIQFFETSAKTNMNVEQVFFSIA---RDIKQRLSEADS 186
Query: 189 VVKRNILKQKPENQSPPIGG----CC 210
+ +K E + G CC
Sbjct: 187 KPEGGTIKINTEGDASAAAGQKSACC 212
>gi|225441149|ref|XP_002267366.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297739984|emb|CBI30166.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/210 (47%), Positives = 129/210 (61%), Gaps = 17/210 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + + E S
Sbjct: 130 ADMDESKRAVPTSQGQALADEYGIKFFETSAKTNFNVEQVFFSIARDIKQ--RIAESDSK 187
Query: 189 VVKRNILKQKPENQSPPIG--------GCC 210
I KP+ P IG CC
Sbjct: 188 AEPLTIKISKPD---PAIGSATAQEKSACC 214
>gi|428169029|gb|EKX37967.1| hypothetical protein GUITHDRAFT_89513 [Guillardia theta CCMP2712]
Length = 209
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/178 (48%), Positives = 120/178 (67%), Gaps = 3/178 (1%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAG 59
M +SG + +YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + G
Sbjct: 1 MAKASGGTGNYDYLVKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIEQEG 60
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KRLKL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W +++ ++++
Sbjct: 61 KRLKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEQSFNNIRN-WMRQIQQHASD- 118
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+ K+L+GNK D ++V+ G ALA E G F E SAK NVE+ F ++A +M
Sbjct: 119 NVNKILIGNKCDMLDKKVIETARGQALADEFGIKFFETSAKNNINVEKAFTEIARDVM 176
>gi|255631584|gb|ACU16159.1| unknown [Glycine max]
Length = 202
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/213 (46%), Positives = 121/213 (56%), Gaps = 28/213 (13%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGV KS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLLKLLLIGDSGVRKSCLLLRFSDDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++ R VS E A A G F+E SAK NVEQ F + I
Sbjct: 123 CDLEANRAVSYEAAKAFADGIGIPFMETSAKGATNVEQAFMAMTASI------------- 169
Query: 190 VKRNILKQKPENQSPPI-----------GGCCS 211
K + Q N PP GGCCS
Sbjct: 170 -KDRMASQPANNARPPTVQIRGQPVAQKGGCCS 201
>gi|260792545|ref|XP_002591275.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
gi|229276479|gb|EEN47286.1| hypothetical protein BRAFLDRAFT_114333 [Branchiostoma floridae]
Length = 209
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/213 (43%), Positives = 133/213 (62%), Gaps = 18/213 (8%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFENIKN-WIRNIEEHAS-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---------M 177
GNK D + R VSR+ G LA E+G F+E SAK+ NVE+ F L I +
Sbjct: 120 GNKCDMEDRRQVSRDRGEKLAIEYGVKFMETSAKSSINVEEAFFTLGRDIKAKMDKKLDL 179
Query: 178 EVPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
P ++G NV + KP+ SP G C
Sbjct: 180 NSP---QKGGNV---QVTAAKPQKSSPFSGWKC 206
>gi|193624758|ref|XP_001951908.1| PREDICTED: ras-related protein Rab-2A-like [Acyrthosiphon pisum]
Length = 211
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +L+T+ K +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARLVTIETKPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +++R V +EEG A A+EHG +F+E SAKT +NVE+ F A +I E
Sbjct: 118 GNKSDLEAKREVKKEEGEAFAREHGLVFMETSAKTSDNVEEAFINTAKEIYE 169
>gi|401424329|ref|XP_003876650.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322492893|emb|CBZ28172.1| putative small GTP-binding protein Rab1 [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 200
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 125/205 (60%), Gaps = 14/205 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLESKVIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E++ Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIEKYAS-ENVNKILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV + A G FLE SAK NVE+ F Q+A I ++ E +V
Sbjct: 123 CDLVTKKVVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKARLAVSGEAKSV 182
Query: 190 VKRNILKQKPENQSPPIG----GCC 210
+ N+ Q+PP CC
Sbjct: 183 TRPNL-------QNPPTAKKDDSCC 200
>gi|378734099|gb|EHY60558.1| GTP-binding protein ypt2 [Exophiala dermatitidis NIH/UT8656]
Length = 209
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 135/211 (63%), Gaps = 13/211 (6%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIDLDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ W V+ +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIR-TWFANVEQHAS-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME--VPS 181
+L+GNK D + +RVVS E+G ALA E G FLE SAK N+E+ F LA + + + S
Sbjct: 119 ILIGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKANINIEKAFYSLASDVKKRLIDS 178
Query: 182 LLEEGSNVVKRNILK-QKPENQSPPIGG-CC 210
E G+ ++ +NQ +GG CC
Sbjct: 179 SKETGAATGNQSAGGVNVAQNQGAGVGGKCC 209
>gi|74096301|ref|NP_001027632.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
gi|28556900|dbj|BAC57527.1| GTP-binding protein rab-2 homologue [Ciona intestinalis]
Length = 176
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 121/172 (70%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS---VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ G+++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGRQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYE 169
>gi|355714863|gb|AES05142.1| RAB1B, member RAS oncoprotein family [Mustela putorius furo]
Length = 210
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/211 (45%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGK 60
+++ + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK
Sbjct: 6 ATAAAMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGK 65
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+KL IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++
Sbjct: 66 TIKLQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-EN 123
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV- 179
K+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 124 VNKLLVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRM 183
Query: 180 -PSLLEEGSNVVKRNILKQKPENQSPPIGGC 209
P G +R LK P GGC
Sbjct: 184 GPGAASGG----ERPNLKIDSTPVKPAGGGC 210
>gi|341886829|gb|EGT42764.1| hypothetical protein CAEBREN_29398 [Caenorhabditis brenneri]
Length = 201
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/200 (47%), Positives = 124/200 (62%), Gaps = 4/200 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYD+T +ETF N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQ-WLQEIDRYAC-ENVNKLLVGNKC 122
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D ++R V + A + G FLE SAK+ NVEQ F +A +I ++
Sbjct: 123 DLTAKRAVETQAAQDYAGQLGIPFLETSAKSSTNVEQAFLTMASEIKSRMGPVQGAGGAP 182
Query: 191 KRNILKQKPENQSPPIGGCC 210
I +P Q GGCC
Sbjct: 183 GVRITGSQPV-QDKKSGGCC 201
>gi|7706563|ref|NP_057614.1| ras-related protein Rab-8B [Homo sapiens]
gi|383872868|ref|NP_001244884.1| ras-related protein Rab-8B [Macaca mulatta]
gi|332235867|ref|XP_003267126.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Nomascus
leucogenys]
gi|397515492|ref|XP_003827984.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Pan paniscus]
gi|402874511|ref|XP_003901079.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Papio anubis]
gi|13638434|sp|Q92930.2|RAB8B_HUMAN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|7209512|dbj|BAA92249.1| RAB-8b protein [Homo sapiens]
gi|18088350|gb|AAH20654.1| RAB8B, member RAS oncogene family [Homo sapiens]
gi|57997184|emb|CAI46143.1| hypothetical protein [Homo sapiens]
gi|193785490|dbj|BAG50856.1| unnamed protein product [Homo sapiens]
gi|208967244|dbj|BAG73636.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|312151528|gb|ADQ32276.1| RAB8B, member RAS oncogene family [synthetic construct]
gi|355692780|gb|EHH27383.1| Ras-related protein Rab-8B [Macaca mulatta]
gi|380784677|gb|AFE64214.1| ras-related protein Rab-8B [Macaca mulatta]
gi|383419143|gb|AFH32785.1| ras-related protein Rab-8B [Macaca mulatta]
gi|384947648|gb|AFI37429.1| ras-related protein Rab-8B [Macaca mulatta]
gi|410217818|gb|JAA06128.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410263584|gb|JAA19758.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410300636|gb|JAA28918.1| RAB8B, member RAS oncogene family [Pan troglodytes]
gi|410332985|gb|JAA35439.1| RAB8B, member RAS oncogene family [Pan troglodytes]
Length = 207
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSANVEEAFFTLARDIM 170
>gi|226509821|ref|NP_001141291.1| uncharacterized protein LOC100273382 [Zea mays]
gi|194703818|gb|ACF85993.1| unknown [Zea mays]
gi|195624662|gb|ACG34161.1| ras-related protein ARA-3 [Zea mays]
gi|414588872|tpg|DAA39443.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 214
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 127/205 (61%), Gaps = 9/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLAESDSK 187
Query: 189 VVKRNILKQKPEN---QSPPIGGCC 210
R I +PE + CC
Sbjct: 188 PEDRTISINRPEGGEASASQKSACC 212
>gi|401427135|ref|XP_003878051.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322494298|emb|CBZ29597.1| putative ras-related protein rab-2a [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 211
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/190 (47%), Positives = 125/190 (65%), Gaps = 8/190 (4%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSVDDLSP-TIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
FK ++IGDSGVGKS LL+ F + L TIGV+F +L+++ GK +KL IWDTAGQE
Sbjct: 8 FKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGKSVKLQIWDTAGQE 67
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
FR++T SYYRGA G +LVYDVTRR+TFT+L W ++ + N V ML+GNK D D
Sbjct: 68 SFRSITRSYYRGASGALLVYDVTRRDTFTHLQS-WLEDAKA-NANTALVIMLIGNKCDLD 125
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRN 193
S+R VSREEG A A+ +G +F+E SAKT +NV+ F Q A I + L ++ +
Sbjct: 126 SKRQVSREEGEAFARCNGLMFMETSAKTSQNVDDAFLQTAALIYDNVQL-----GMIDAS 180
Query: 194 ILKQKPENQS 203
++ +P Q+
Sbjct: 181 VVSGRPGTQA 190
>gi|89258407|gb|ABD65427.1| Rab1 [Suberites domuncula]
Length = 205
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 127/206 (61%), Gaps = 11/206 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTVELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+FTN+ W +E+D Y++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGANGIIIVYDVTDQESFTNVK-TWLQEIDRYAST-NVSKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A + FLE SAK NVEQ F +A +I + G
Sbjct: 123 CDLTNKKVVDFTTAKEFADQLQIPFLETSAKNATNVEQAFMTMAAEIKRAQG-PDNGHVT 181
Query: 190 VKRNILKQKPENQSPPI-----GGCC 210
N ++ P +Q P+ GCC
Sbjct: 182 PGGNTVRITPSSQ--PLQQDKKKGCC 205
>gi|354478791|ref|XP_003501598.1| PREDICTED: ras-related protein Rab-26-like, partial [Cricetulus
griseus]
Length = 234
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 118/173 (68%), Gaps = 4/173 (2%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
S G + YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 30 SLGGSGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGM 89
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YD+T +++F N+ W E+ Y+ QD
Sbjct: 90 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQ-AWLTEIQEYA-QQD 147
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
V ML+GNKVD ERVV RE+G LAKE+G F+E SAKT NV+ F +A
Sbjct: 148 VVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIA 200
>gi|261188123|ref|XP_002620478.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
gi|239593353|gb|EEQ75934.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis SLH14081]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 15/210 (7%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA---LKIMEVP 180
ML+GNK D + +R VS E+G LA E G FLE SAK NVE+ F LA K+M+
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTT 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ GS V + + Q G CC
Sbjct: 179 KSEQAGSQGV---TIDHQGAGQGNLGGKCC 205
>gi|296213405|ref|XP_002753255.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Callithrix
jacchus]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|38175435|dbj|BAC83185.2| putative ras-related protein [Oryza sativa Japonica Group]
gi|215737480|dbj|BAG96610.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215737584|dbj|BAG96714.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767074|dbj|BAG99302.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/214 (43%), Positives = 135/214 (63%), Gaps = 6/214 (2%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTI-GVDFKIKLLTVAGK 60
G+ S +D K+LLIGDSGVGKS LL+ F + T G+DFK++ + + GK
Sbjct: 3 GAPSRSRGDFDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGK 62
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
R+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ +
Sbjct: 63 RVKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-N 120
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-V 179
K+LVGNKVD D++RVVS +G LA E+G F E SAKT +NVEQ F +A I + +
Sbjct: 121 VNKILVGNKVDMDTKRVVSTAQGQKLADEYGMKFFETSAKTNQNVEQVFFTIARDIKQRL 180
Query: 180 PSLLEEGSNVVKRNILKQKPEN--QSPPIGGCCS 211
+ + I +Q+P+ S CC+
Sbjct: 181 TETVAAAAEPPTIQISRQEPDQAAASSRWSACCN 214
>gi|149773480|ref|NP_001092729.1| ras-related protein Rab-8B [Danio rerio]
gi|148744724|gb|AAI42847.1| Rab8b protein [Danio rerio]
Length = 209
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFVTLARDIM 170
>gi|414588871|tpg|DAA39442.1| TPA: Ras protein ARA-3 [Zea mays]
Length = 228
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 127/205 (61%), Gaps = 9/205 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 26 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTVELDGKRVKLQIWDT 85
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 86 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 143
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 144 ADMDESKRAVPTSRGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLAESDSK 201
Query: 189 VVKRNILKQKPEN---QSPPIGGCC 210
R I +PE + CC
Sbjct: 202 PEDRTISINRPEGGEASASQKSACC 226
>gi|170594385|ref|XP_001901944.1| Ras-related protein Rab-1A [Brugia malayi]
gi|158590888|gb|EDP29503.1| Ras-related protein Rab-1A, putative [Brugia malayi]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/201 (47%), Positives = 124/201 (61%), Gaps = 4/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLNGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD+T +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDITDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R V A + G FLE SAK+ NVEQ F +A +I +++
Sbjct: 126 CDLIIRRAVEHSAAKEYADQLGIPFLETSAKSSTNVEQAFLTMASEIKNRMGPIQQVGTG 185
Query: 190 VKRNILKQKPENQSPPIGGCC 210
I +P N+ GGCC
Sbjct: 186 PSVRIGGSQPVNEKKS-GGCC 205
>gi|395546064|ref|XP_003774914.1| PREDICTED: ras-related protein Rab-2A-like [Sarcophilus harrisii]
Length = 212
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 99/215 (46%), Positives = 133/215 (61%), Gaps = 18/215 (8%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +L+++ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARLVSIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ ++ N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHA-NANMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-----VPS 181
GNK D D R VS+EEG A A+EHG +F+E SAKT NVE F A I E +
Sbjct: 118 GNKSDLDIRREVSKEEGEAFAQEHGLIFMETSAKTAVNVEDAFISTARGIYEKIQEGIFD 177
Query: 182 LLEEGSNV-VKRNILKQKPE---NQSPPI--GGCC 210
+ E S + + + P NQ P GGCC
Sbjct: 178 MSNETSGIKIGPQHVGAAPTHAGNQGVPRSGGGCC 212
>gi|115496115|ref|NP_001069785.1| ras-related protein Rab-8B [Bos taurus]
gi|116255981|sp|Q2HJI8.1|RAB8B_BOVIN RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|88682949|gb|AAI05331.1| RAB8B, member RAS oncogene family [Bos taurus]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLEASAKSSMNVEEAFFTLARDIM 170
>gi|351723507|ref|NP_001238305.1| uncharacterized protein LOC100306147 [Glycine max]
gi|255627683|gb|ACU14186.1| unknown [Glycine max]
Length = 203
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 125/203 (61%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT ++F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEDSFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + RVVS + A + G F+E SAK NVE F ++ I + +N
Sbjct: 123 SDLTANRVVSYDTAKEFADQIGIPFMETSAKDATNVEDAFMAMSAAIKNRMASQPSANNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 KPPTVQIRGQPVGQK---SGCCS 202
>gi|391337937|ref|XP_003743320.1| PREDICTED: ras-related protein Rab-1A-like [Metaseiulus
occidentalis]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVVKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT +E+F N+ W +E+D Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVAYDVTDQESFNNVKQ-WLQEIDRYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
D +++VV AK+ FLE SAK NVEQ F+++A IM
Sbjct: 126 CDLTTKKVVDHSTAAEFAKQLDIPFLETSAKDSTNVEQAFKKMAEDIM 173
>gi|291402892|ref|XP_002718230.1| PREDICTED: RAB8B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|354474332|ref|XP_003499385.1| PREDICTED: ras-related protein Rab-8B-like [Cricetulus griseus]
gi|410961066|ref|XP_003987106.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Felis catus]
gi|344251051|gb|EGW07155.1| Ras-related protein Rab-8B [Cricetulus griseus]
gi|351698401|gb|EHB01320.1| Ras-related protein Rab-8B [Heterocephalus glaber]
gi|431895937|gb|ELK05355.1| Ras-related protein Rab-8B [Pteropus alecto]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|397620779|gb|EJK65905.1| hypothetical protein THAOC_13196 [Thalassiosira oceanica]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/212 (47%), Positives = 133/212 (62%), Gaps = 15/212 (7%)
Query: 6 GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKR 61
++YD+ K+L+IGDSGVGK+ LL+ + + S SPT IG+DFKIK + V GKR
Sbjct: 2 ANQSAYDMQVKLLMIGDSGVGKTCLLLRYANES---FSPTFITTIGIDFKIKNVEVDGKR 58
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ +
Sbjct: 59 IKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-DVHV 116
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
K+LVGNK D E+VVS EEG LAKE G F ECSAK NVE F +A + +
Sbjct: 117 NKILVGNKCDMLDEKVVSTEEGQKLAKEFGVDFYECSAKNDINVEPTFLTIARAVKD--R 174
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIG---GCC 210
L+++G Q N P G GCC
Sbjct: 175 LMKDGGGAGPAKKGVQLGRN-DPAAGNRKGCC 205
>gi|219127381|ref|XP_002183915.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404638|gb|EEC44584.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/212 (45%), Positives = 128/212 (60%), Gaps = 10/212 (4%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVA 58
S + S YD+ K+L+IGDSGVGK+ LL+ + + D SPT IG+DFKIK + V
Sbjct: 2 SQASNSAPYDMQIKLLMIGDSGVGKTCLLLRYAN---DSFSPTFITTIGIDFKIKNVDVE 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
G R+KL IWDTAGQERFRT+T+SY+RGAQGI+LVYDVT R +F ++ + W ++ ++ +
Sbjct: 59 GTRIKLQIWDTAGQERFRTITTSYFRGAQGILLVYDVTDRRSFESIRN-WISQIQQHA-D 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K+LVGNK D E+VVS EEG LA E G F ECSAK +VE F +A + +
Sbjct: 117 VHVNKILVGNKCDMLDEKVVSTEEGQKLASEFGIPFFECSAKNDIHVESSFMHIAKAVKD 176
Query: 179 VPSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+G K L KP CC
Sbjct: 177 RLKADGQGGPSAKTG-LNLKPNQSGGKDKKCC 207
>gi|212724108|ref|NP_001131632.1| uncharacterized protein LOC100192989 [Zea mays]
gi|242090779|ref|XP_002441222.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
gi|194690528|gb|ACF79348.1| unknown [Zea mays]
gi|194692096|gb|ACF80132.1| unknown [Zea mays]
gi|194700986|gb|ACF84577.1| unknown [Zea mays]
gi|194703832|gb|ACF86000.1| unknown [Zea mays]
gi|195628548|gb|ACG36104.1| ras-related protein ARA-3 [Zea mays]
gi|241946507|gb|EES19652.1| hypothetical protein SORBIDRAFT_09g022670 [Sorghum bicolor]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/206 (47%), Positives = 131/206 (63%), Gaps = 10/206 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLAETDSK 187
Query: 189 VVKRNILKQKPE--NQSPPI--GGCC 210
+ I KP+ +++P CC
Sbjct: 188 PEDKAIKINKPDQGSEAPAAQRSACC 213
>gi|358385051|gb|EHK22648.1| secretion-related small GTPase [Trichoderma virens Gv29-8]
Length = 203
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N++Q F LA I
Sbjct: 121 IGNKCDWEDKRVVSTEQGQALADELGIPFLEVSAKSNINIDQAFYSLAADI 171
>gi|197100646|ref|NP_001124875.1| ras-related protein Rab-8B [Pongo abelii]
gi|395822281|ref|XP_003784449.1| PREDICTED: ras-related protein Rab-8B [Otolemur garnettii]
gi|403298222|ref|XP_003939929.1| PREDICTED: ras-related protein Rab-8B isoform 1 [Saimiri
boliviensis boliviensis]
gi|75070935|sp|Q5REC9.1|RAB8B_PONAB RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|55726211|emb|CAH89878.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|221116677|ref|XP_002157639.1| PREDICTED: ras-related protein Rab-8A-like [Hydra magnipapillata]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 118/170 (69%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIDLDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKN-WIRNIEEHAA-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + +R VS E G ALA +H F+E SAKT NVE+ F LA I
Sbjct: 120 GNKCDMNDKRQVSAERGQALAMDHNVKFMETSAKTSANVEEAFISLARDI 169
>gi|23463313|ref|NP_695229.1| ras-related protein Rab-8B [Rattus norvegicus]
gi|27734154|ref|NP_775589.1| ras-related protein Rab-8B [Mus musculus]
gi|2500066|sp|P70550.1|RAB8B_RAT RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|46576875|sp|P61028.1|RAB8B_MOUSE RecName: Full=Ras-related protein Rab-8B; Flags: Precursor
gi|1314637|gb|AAA99782.1| GTPase Rab8b [Rattus norvegicus]
gi|26351205|dbj|BAC39239.1| unnamed protein product [Mus musculus]
gi|37589192|gb|AAH59208.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|74212761|dbj|BAE33350.1| unnamed protein product [Mus musculus]
gi|112292971|dbj|BAF02863.1| Rab8B [Mus musculus]
gi|148694186|gb|EDL26133.1| RAB8B, member RAS oncogene family, isoform CRA_c [Mus musculus]
gi|149028910|gb|EDL84251.1| RAB8B, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|165970644|gb|AAI58580.1| RAB8B, member RAS oncogene family [Rattus norvegicus]
gi|187956868|gb|AAI57975.1| RAB8B, member RAS oncogene family [Mus musculus]
gi|335775450|gb|AEH58576.1| Ras-related protein Rab-8B-like protein [Equus caballus]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|383864075|ref|XP_003707505.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Megachile
rotundata]
Length = 210
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 93/209 (44%), Positives = 134/209 (64%), Gaps = 7/209 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK + +R VS+E G LA E+G F+E SAK+ NVE+ F LA I ++ L+E
Sbjct: 120 GNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLKE 179
Query: 186 GSNVVK---RNILKQKPENQSPPIGGCCS 211
SN K + +P+ + P CS
Sbjct: 180 ASNPPKGGGHQLKASEPQRKPPSWLARCS 208
>gi|190345453|gb|EDK37339.2| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 120/180 (66%), Gaps = 9/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S+ S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 2 SARAPSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIESK 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++ N
Sbjct: 59 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENV-ETWYQTVTQHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D LVGNK D DS R VS EEG LA + FLE SAK+ NV+ F +LA I E
Sbjct: 117 EDAQIFLVGNKCDDDSSRQVSTEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQE 176
>gi|54020781|ref|NP_001005636.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|49257826|gb|AAH74632.1| rab2b, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89269892|emb|CAJ83496.1| RAB2B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 120/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF++L+ W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTS-WLEDARQHSSS-NMVIILI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R VSREEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVSREEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|301756855|ref|XP_002914277.1| PREDICTED: ras-related protein Rab-8B-like [Ailuropoda melanoleuca]
gi|281347305|gb|EFB22889.1| hypothetical protein PANDA_002150 [Ailuropoda melanoleuca]
Length = 207
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|239609095|gb|EEQ86082.1| GTP-binding protein SAS1 [Ajellomyces dermatitidis ER-3]
gi|327356417|gb|EGE85274.1| GTP-binding protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 129/210 (61%), Gaps = 15/210 (7%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAS-EGVHK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA---LKIMEVP 180
ML+GNK D + +R VS E+G LA E G FLE SAK NVE+ F LA K+M+
Sbjct: 119 MLIGNKCDWEEKRAVSTEQGQQLANELGIPFLEVSAKNNINVEKAFYTLASDIKKVMDTN 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ GS V + + Q G CC
Sbjct: 179 KSEQAGSQGV---TIDHQGAGQGNLGGKCC 205
>gi|50752811|ref|XP_413757.1| PREDICTED: ras-related protein Rab-8B [Gallus gallus]
Length = 201
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 123/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E+G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNEKRQVSKEKGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 95/199 (47%), Positives = 125/199 (62%), Gaps = 5/199 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKIL+IGDSGVGKSSLL+ F + +D TIGVDFKIK + + K +KL IWDT
Sbjct: 76 YDYLFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWDT 135
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYY+GAQGII+VYDVT +E+F N+ W +++ Y+ KMLVGNK
Sbjct: 136 AGQERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKK-WLDDIEKYAA-PSVTKMLVGNK 193
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
+D ++ R V + A F+E SAK NVE+ F +A + ++ S GS
Sbjct: 194 IDVEANRQVKSQTAKDYATSQNMTFIESSAKESTNVERAFLLMA-ESLKNSSKTTHGSGS 252
Query: 190 VKRNI-LKQKPENQSPPIG 207
K+NI + +K P G
Sbjct: 253 AKKNIKVGEKIHTHKPLFG 271
>gi|302756377|ref|XP_002961612.1| rab family GTPase [Selaginella moellendorffii]
gi|302775546|ref|XP_002971190.1| rab family GTPase [Selaginella moellendorffii]
gi|300161172|gb|EFJ27788.1| rab family GTPase [Selaginella moellendorffii]
gi|300170271|gb|EFJ36872.1| rab family GTPase [Selaginella moellendorffii]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/176 (52%), Positives = 122/176 (69%), Gaps = 5/176 (2%)
Query: 1 MGSSSGQSNS-YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVA 58
M S +G++ + YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + +
Sbjct: 1 MASGAGRARADYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTVDLD 60
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GKR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++
Sbjct: 61 GKRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD 119
Query: 119 QDCVKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
+ K+LVGNK D D S+R VS E G ALA E G F E SAKT NVE+ F +A
Sbjct: 120 -NVNKILVGNKADMDESKRAVSTERGQALANEFGIKFFETSAKTNLNVEKVFFTIA 174
>gi|158341664|ref|NP_001103449.1| ras-related protein Rab-1B [Rattus norvegicus]
gi|293332049|ref|NP_001168820.1| uncharacterized protein LOC100382625 [Zea mays]
gi|392343176|ref|XP_002727643.2| PREDICTED: ras-related protein Rab-1B-like [Rattus norvegicus]
gi|149042337|gb|EDL96044.1| rCG63295 [Rattus norvegicus]
gi|149062037|gb|EDM12460.1| rCG48149, isoform CRA_b [Rattus norvegicus]
gi|223973195|gb|ACN30785.1| unknown [Zea mays]
Length = 201
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK GGCC
Sbjct: 182 ---ERPNLKIDSTPVKSASGGCC 201
>gi|339248933|ref|XP_003373454.1| GTP-binding protein Ypt2 [Trichinella spiralis]
gi|316970427|gb|EFV54365.1| GTP-binding protein Ypt2 [Trichinella spiralis]
Length = 178
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ SYD FK+LLIGDSGVGK+ LL F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKSYDFLFKLLLIGDSGVGKTCLLFRFAEDSFNNTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVY++T ++F N+ + W + ++ +++ + K+++
Sbjct: 62 WDTAGQERFRTITNAYYRGAMGILLVYEITNEKSFENIKN-WVRNIEEHAS-ANVEKIIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + +R VSRE G LA E+G F+E SAK NVE F LA I
Sbjct: 120 GNKCDMEDKRQVSRERGAQLAIEYGVKFMETSAKANINVESAFFTLARDI 169
>gi|147902722|ref|NP_001085321.1| rab2b, member RAS oncogene family [Xenopus laevis]
gi|49257196|gb|AAH71068.1| MGC78967 protein [Xenopus laevis]
gi|83318342|gb|AAI08769.1| MGC78967 protein [Xenopus laevis]
Length = 215
Score = 167 bits (424), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 121/172 (70%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK +KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF++L+ W ++ +S++ + V +L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFSHLTS-WLEDARQHSSS-NMVIILI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R VSREEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLESRRDVSREEGEAFAREHGLIFMETSAKTSANVEEAFIDTAKEIYK 169
>gi|392579564|gb|EIW72691.1| hypothetical protein TREMEDRAFT_58860 [Tremella mesenterica DSM
1558]
Length = 208
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/198 (47%), Positives = 124/198 (62%), Gaps = 23/198 (11%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTI 66
YD K+LLIGDSGVGKS LL+ F D +P TIG+DFKI+ + + GK++KL I
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCD---DAWTPSFITTIGIDFKIRTIELDGKKIKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F+N+ W +D +++ K+L+
Sbjct: 63 WDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFSNIR-TWHANIDQHAS-PGVNKILI 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D D +R VS E+G ALA E G FLE SAK E VE+ F LA I
Sbjct: 121 GNKCDWDDKRAVSLEQGKALADEFGLRFLETSAKANEGVEEAFFTLARDI---------- 170
Query: 187 SNVVKRNILKQKPENQSP 204
K ++ +PE +P
Sbjct: 171 ----KTRLIDSQPEAAAP 184
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 85/175 (48%), Positives = 121/175 (69%), Gaps = 3/175 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ YD FK+LLIGDSGVGK+ L++ F + + TIG+DFK+K + V GK++KL +
Sbjct: 2 AKKYDFLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + +ML+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVSRMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPS 181
GNK D +++R VS+E G LAK+HG F E SAK+ NVE+ F LA I++ S
Sbjct: 120 GNKCDIEAKRKVSKETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILKQSS 174
>gi|58265066|ref|XP_569689.1| Rab/GTPase [Cryptococcus neoformans var. neoformans JEC21]
gi|134109357|ref|XP_776793.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50259473|gb|EAL22146.1| hypothetical protein CNBC2840 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57225921|gb|AAW42382.1| Rab/GTPase, putative [Cryptococcus neoformans var. neoformans
JEC21]
gi|304569874|gb|ADM45310.1| Sav1 [Cryptococcus neoformans]
gi|405119103|gb|AFR93876.1| rab/GTPase [Cryptococcus neoformans var. grubii H99]
Length = 211
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 100/216 (46%), Positives = 134/216 (62%), Gaps = 11/216 (5%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAG 59
M +GQ YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + G
Sbjct: 1 MSGPAGQH--YDFLIKLLLIGDSGVGKSCLLLRFCEDSWTPSFITTIGIDFKIRTIELDG 58
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ W ++ +++
Sbjct: 59 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIR-TWLSNIEQHAS-P 116
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA--LKIM 177
K+L+GNK D + +R V+ E+G ALA E G FLE SAK E VE+ F LA +K
Sbjct: 117 GVNKILIGNKCDWEEKRSVTIEQGRALADEFGLRFLETSAKANEGVEEAFFTLARDIKTR 176
Query: 178 EVPSLLEEGSNV---VKRNILKQKPENQSPPIGGCC 210
+ S +E + V RN + ++ S GGCC
Sbjct: 177 LIDSQPQEAAPVQLGADRNGVNVNKQSDSSS-GGCC 211
>gi|224104483|ref|XP_002313450.1| predicted protein [Populus trichocarpa]
gi|222849858|gb|EEE87405.1| predicted protein [Populus trichocarpa]
Length = 215
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 94/204 (46%), Positives = 126/204 (61%), Gaps = 6/204 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT +NVEQ F +A I + S + +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNQNVEQVFFSIARDIKQRLSDTDTKAE 189
Query: 189 VVKRNILKQKPENQSPPI--GGCC 210
I + P CC
Sbjct: 190 PATSKIHLDQASGAGPAAQKSACC 213
>gi|148236958|ref|NP_001087273.1| RAB8B, member RAS oncogene family [Xenopus laevis]
gi|51873938|gb|AAH78493.1| MGC85265 protein [Xenopus laevis]
Length = 207
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/202 (45%), Positives = 132/202 (65%), Gaps = 17/202 (8%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + +R VSRE+G LA ++G FLE SAK+ NVE+ F L IM
Sbjct: 120 GNKCDMNDKRQVSREKGEKLAIDYGIKFLETSAKSSINVEEAFFTLGRDIM--------- 170
Query: 187 SNVVKRNILKQKPENQSPPIGG 208
K N ++ EN SP GG
Sbjct: 171 ---TKLN--RKMNENISPSGGG 187
>gi|67474604|ref|XP_653051.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|14423577|gb|AAK62471.1|AF389109_1 small GTP-binding protein Rab8 [Entamoeba histolytica]
gi|56469970|gb|EAL47665.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449710651|gb|EMD49688.1| small GTP-binding protein Rab8, putative [Entamoeba histolytica
KU27]
Length = 199
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 130/203 (64%), Gaps = 12/203 (5%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIW 67
D + K+LLIG+SGVGKSSLL+ F S D +P T+G+DF++K + + K+LKL IW
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRF---SEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRT+ SSYYRG GI+LVYD+T RE+F N+ + W + ++ + +Q+ K+LVG
Sbjct: 62 DTAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVG 119
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D + +RVV+ EEG +A + G FLE SAK V+ CF LA +++ + E S
Sbjct: 120 NKCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQ---RIGESS 176
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+ I+ + Q GCC
Sbjct: 177 QSAQPGIVDPTQQTQPTESTGCC 199
>gi|281350605|gb|EFB26189.1| hypothetical protein PANDA_004764 [Ailuropoda melanoleuca]
Length = 196
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 125/202 (61%), Gaps = 9/202 (4%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 1 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 60
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 61 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 118
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGSN 188
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 119 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG-- 176
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 177 --ERPNLKIDSTPVKPAGGGCC 196
>gi|145515201|ref|XP_001443500.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834479|emb|CAI44558.1| rab_A52 [Paramecium tetraurelia]
gi|124410889|emb|CAK76103.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 132/211 (62%), Gaps = 7/211 (3%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISS--SVDDLSPTIGVDFKIKLLTVAGK 60
S S YD K+++IGDSGVGK+++L F + S+ ++ T+GVDFKIK + V GK
Sbjct: 2 SKQANSQDYDWLVKVIVIGDSGVGKTNILSQFCDAKFSITHMA-TLGVDFKIKTIDVDGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFR +T +YY+GAQG+IL Y V R++F N+ D W + + + + D
Sbjct: 61 KLKLQIWDTAGQERFRNITKTYYKGAQGVILTYSVIDRQSFQNV-DGWLRSIQENTNSSD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
+LVGNK D +ER V+ EEG +++++ F E SAK+ N+ + F LA +I++
Sbjct: 120 VQLVLVGNKADMSAERQVTLEEGKKMSQQYNIPFFETSAKSNMNINEAFNNLAFRIIQTL 179
Query: 181 SLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
S ++ +N K+N+ LK P CC
Sbjct: 180 SKMQ--TNEEKQNLNLKPSEGKDKPKSESCC 208
>gi|407038762|gb|EKE39296.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 199
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 130/203 (64%), Gaps = 12/203 (5%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIW 67
D + K+LLIG+SGVGKSSLL+ F S D +P T+G+DF++K + + K+LKL IW
Sbjct: 5 DSTIKLLLIGESGVGKSSLLLRF---SEDAFNPMYITTVGIDFRVKNIELDNKKLKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRT+ SSYYRG GI+LVYD+T RE+F N+ + W + ++ + +Q+ K+LVG
Sbjct: 62 DTAGQERFRTIVSSYYRGVMGIVLVYDITSRESFNNI-EYWMRNIEA-NADQNVNKILVG 119
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D + +RVV+ EEG +A + G FLE SAK V+ CF LA +++ + E S
Sbjct: 120 NKCDAEDKRVVTSEEGQQMANKLGIPFLETSAKNSLKVDDCFISLARDVIQ---RIGESS 176
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+ I+ + Q GCC
Sbjct: 177 QSAQPGIVDPTQQTQPTESTGCC 199
>gi|76363526|sp|P51156.2|RAB26_RAT RecName: Full=Ras-related protein Rab-26
gi|38303826|gb|AAH61984.1| Rab26 protein [Rattus norvegicus]
gi|149052027|gb|EDM03844.1| RAB26, member RAS oncogene family [Rattus norvegicus]
Length = 257
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 121/178 (67%), Gaps = 4/178 (2%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
S G + YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 53 SLGGTGDFYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGM 112
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YD+T +++F N+ W E+ Y+ QD
Sbjct: 113 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDITNKDSFDNIQ-AWLTEIQEYA-QQD 170
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
V ML+GNKVD ERVV RE+G LAKE+G F+E SAK+ NV+ F +A ++ +
Sbjct: 171 VVLMLLGNKVDSTQERVVKREDGEKLAKEYGLPFMETSAKSGLNVDLAFTAIAKELKQ 228
>gi|168033669|ref|XP_001769337.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
gi|162679443|gb|EDQ65891.1| Rab8/RabE-family small GTPase [Physcomitrella patens subsp. patens]
Length = 215
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 98/218 (44%), Positives = 132/218 (60%), Gaps = 13/218 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
++ ++++YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + KR
Sbjct: 2 ATRARADNYDYLIKLLLIGDSGVGKSCLLLRFSDDSFTTSFITTIGIDFKIRTIELDNKR 61
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ +
Sbjct: 62 IKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NV 119
Query: 122 VKMLVGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
K+LVGNK D D S+R V +G ALA E+G F E SAKT NVE F +A I
Sbjct: 120 NKILVGNKADMDPSKRAVPFAKGQALADEYGIKFFETSAKTNMNVEDVFFTIARDIKT-- 177
Query: 181 SLLEEGSNVVKRN-------ILKQKPENQSPPIGGCCS 211
L E S +N LK P G CCS
Sbjct: 178 RLAESDSKPEAKNAGGKPDVTLKSGGAQPKPASGSCCS 215
>gi|296483236|tpg|DAA25351.1| TPA: ras-related protein Rab-8B [Bos taurus]
gi|440907016|gb|ELR57209.1| Ras-related protein Rab-8B [Bos grunniens mutus]
Length = 207
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFTLARDIM 170
>gi|167391072|ref|XP_001739628.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165896634|gb|EDR23985.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 88/168 (52%), Positives = 116/168 (69%), Gaps = 3/168 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNVKLQIWDTA 65
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGAQGII+VY V +TF N+ W +E++ Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D + ER V+ E+G LA F+E SAK NV++ F ++A IM+
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFNKIATDIMK 171
>gi|242089159|ref|XP_002440412.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
gi|241945697|gb|EES18842.1| hypothetical protein SORBIDRAFT_09g000550 [Sorghum bicolor]
Length = 205
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 100/205 (48%), Positives = 125/205 (60%), Gaps = 11/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDS VGKS LL+ F S VD TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGDSSVGKSCLLLRFADDSFVDTYISTIGVDFKIRTVDLDGKTVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ C K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAHGIIIVYDVTDMESFNNIKQ-WLSEIDRYASDNVC-KLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +VV E+ A A G F+E SAK NVE+ F ++ +I M +E
Sbjct: 125 CDLVDSKVVETEKAKAFADSLGIPFIETSAKESINVEEAFLTMSSEIKKRMATQPTVERR 184
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
V +K +P Q CCS
Sbjct: 185 PTVHVH--MKGQPIQQK---SSCCS 204
>gi|417397109|gb|JAA45588.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 207
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDRRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|357496971|ref|XP_003618774.1| Small GTP-binding protein [Medicago truncatula]
gi|355493789|gb|AES74992.1| Small GTP-binding protein [Medicago truncatula]
Length = 211
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 118/172 (68%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F ++LT+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMLTIDSRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + L+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMTITLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D R VS+EEG AKE+G LF+E SAKT +NVE+ F + A KI++
Sbjct: 118 GNKCDLSHRRAVSKEEGEQFAKENGLLFMEASAKTAQNVEEAFIKTAAKILQ 169
>gi|225710322|gb|ACO11007.1| Ras-related protein Rab-8A [Caligus rogercresseyi]
Length = 212
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 127/183 (69%), Gaps = 4/183 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D + R V++E+G LA E+G F+E SAK+ NVE+ F LA I ++ L+E
Sbjct: 120 GNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSATNVEEAFFTLARDIKAKMEKRLQE 179
Query: 186 GSN 188
SN
Sbjct: 180 ASN 182
>gi|194206583|ref|XP_001918101.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-8B-like
[Equus caballus]
Length = 207
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/172 (49%), Positives = 124/172 (72%), Gaps = 5/172 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD--LSPTIGVDFKIKLLTVAGKRLKLT 65
+ +YD FK+LLIGDSGVGK+ LL F + + +SP IG+DFKI+ + + GK++KL
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEEAFNTTFISP-IGIDFKIRTIELDGKKIKLQ 60
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M+
Sbjct: 61 IWDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMI 118
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
+GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 119 LGNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|323451357|gb|EGB07234.1| hypothetical protein AURANDRAFT_69836 [Aureococcus anophagefferens]
Length = 198
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 128/204 (62%), Gaps = 16/204 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YDL K+L+IGDS VGK+SLL+ + + + TIG+DFKIK + + GKR+KL IWDT
Sbjct: 7 YDLQIKLLMIGDSAVGKTSLLLRYANDTFSSTFITTIGIDFKIKTINLDGKRVKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQE+FRT+T SY+RGAQGI+LVYD+T R TF ++ W +++ ++ Q K+LVGNK
Sbjct: 67 AGQEQFRTITRSYFRGAQGIVLVYDITDRGTFNSVRS-WMAQINEHADGQ-VNKILVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-EVPSLLEEGSN 188
D S R VS +EG LA E+G F+E SAK NV + F +A ++ +PS G
Sbjct: 125 CDNSSARKVSADEGRKLADEYGVRFIETSAKQNVNVTEAFRAIAQQVTSRIPSRAAGGV- 183
Query: 189 VVKRNILKQKPENQSPPIG--GCC 210
K ++ + P G GCC
Sbjct: 184 ---------KLQSAAKPGGKKGCC 198
>gi|426369378|ref|XP_004051668.1| PREDICTED: ras-related protein Rab-1B [Gorilla gorilla gorilla]
Length = 198
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 125/202 (61%), Gaps = 9/202 (4%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 3 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 62
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 63 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 120
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGSN 188
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 121 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG-- 178
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 179 --ERPNLKIDSTPVKPAGGGCC 198
>gi|395502994|ref|XP_003755858.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Sarcophilus
harrisii]
Length = 216
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEI 167
>gi|357440493|ref|XP_003590524.1| Ras-like protein [Medicago truncatula]
gi|355479572|gb|AES60775.1| Ras-like protein [Medicago truncatula]
Length = 216
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 129/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ--RLAESDSK 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
+ + +P+ Q+ CC
Sbjct: 188 TEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|225439876|ref|XP_002278842.1| PREDICTED: ras-related protein RABE1c [Vitis vinifera]
gi|297741550|emb|CBI32682.3| unnamed protein product [Vitis vinifera]
Length = 216
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 128/207 (61%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F + I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQ--RLAETDSK 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
I P++ ++P CC
Sbjct: 188 AEPHTIRINPPDHAAGSAETPAKSACC 214
>gi|71019563|ref|XP_760012.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
gi|46099538|gb|EAK84771.1| hypothetical protein UM03865.1 [Ustilago maydis 521]
Length = 209
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/209 (43%), Positives = 131/209 (62%), Gaps = 13/209 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTI 66
YD K+LLIGDSGVGKS LL+ F D +P TIG+DFKI+ + + GKR+KL I
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCD---DAWTPSFITTIGIDFKIRTIELDGKRIKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LV+DVT +++F N+ W ++ +++ + K+L+
Sbjct: 63 WDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILI 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA----LKIMEVPSL 182
GNK D + +R V+ E+G LAKE G ++E SAK+ NVE+ F LA ++++ ++
Sbjct: 121 GNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAV 180
Query: 183 LEEGSNVVKRNILKQKPENQSPPIGGCCS 211
+ N+ GGCCS
Sbjct: 181 TQASPAAAAGNVNVNSAPKSGAAGGGCCS 209
>gi|50413456|ref|XP_457265.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
gi|49652930|emb|CAG85266.1| DEHA2B07062p [Debaryomyces hansenii CBS767]
Length = 208
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|145477777|ref|XP_001424911.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74833757|emb|CAI39348.1| rab_B10 [Paramecium tetraurelia]
gi|124391978|emb|CAK57513.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKILLIG+S VGKSSLL+ F + PTIGVDFKI+ + GK +K+ IWDT
Sbjct: 7 YDYLFKILLIGNSAVGKSSLLLRFSDQIFSESFLPTIGVDFKIRTFDMQGKSVKMQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERF+T+T+SYY+GA GIIL YD+T +++F ++ + W EV+ +++ ++ V++LVGNK
Sbjct: 67 AGQERFKTITASYYKGAHGIILTYDITDKQSFKDIEN-WLAEVEKHAS-ENVVRLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +S+R V+ EEG LA G F+E SAK NV+Q F LA I
Sbjct: 125 ADLESKRQVTYEEGKELADSLGIKFIEASAKANTNVDQAFMTLANNI 171
>gi|189204310|ref|XP_001938490.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330920200|ref|XP_003298922.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
gi|187985589|gb|EDU51077.1| GTP-binding protein SAS1 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311327651|gb|EFQ92986.1| hypothetical protein PTT_09780 [Pyrenophora teres f. teres 0-1]
Length = 206
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 130/208 (62%), Gaps = 10/208 (4%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +FTN+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFSNVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+L+GNK D + +R VS E+G ALA E G FLE SAK+ NV++ F LA I +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDT 178
Query: 184 EEGSNVVKRNILKQKPENQSPPIGG-CC 210
+ P++ + +GG CC
Sbjct: 179 ARTDQTAAPKVDVGGPDSGNAGMGGKCC 206
>gi|131803|sp|P10536.1|RAB1B_RAT RecName: Full=Ras-related protein Rab-1B
gi|57006|emb|CAA32105.1| unnamed protein product [Rattus sp.]
Length = 201
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK GGCC
Sbjct: 182 ---ERPNLKIDSTPVKSASGGCC 201
>gi|366997238|ref|XP_003678381.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
gi|342304253|emb|CCC72042.1| hypothetical protein NCAS_0J00630 [Naumovozyma castellii CBS 4309]
Length = 218
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 95/185 (51%), Positives = 122/185 (65%), Gaps = 10/185 (5%)
Query: 1 MGSSSGQSNS------YDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIK 53
+ +SSG +NS YD KILLIGDSGVGKS LLV F+ + + TIG+DFKIK
Sbjct: 7 ISTSSGNANSSTAAKNYDSVMKILLIGDSGVGKSCLLVRFVENKFNPSFITTIGIDFKIK 66
Query: 54 LLTVAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVD 113
L + G+++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W V+
Sbjct: 67 TLDIQGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFQNIRQ-WYSTVN 125
Query: 114 LYSTNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
++ N+ +LVGNK D R V++E+G LA+E G F+E SAK +NV F QLA
Sbjct: 126 EHA-NEQVQLLLVGNKSDL-GNRQVTKEQGEELARELGLPFMEASAKNDDNVNDLFLQLA 183
Query: 174 LKIME 178
I E
Sbjct: 184 KLIQE 188
>gi|146419610|ref|XP_001485766.1| hypothetical protein PGUG_01437 [Meyerozyma guilliermondii ATCC
6260]
Length = 205
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 120/180 (66%), Gaps = 9/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S+ S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 2 SARAPSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIESK 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++ N
Sbjct: 59 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDLRSFENV-ETWYQTVTQHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D LVGNK D DS R VS EEG LA + FLE SAK+ NV+ F +LA I E
Sbjct: 117 EDAQIFLVGNKCDDDSSRQVSTEEGQQLAAKLNVPFLEASAKSNHNVDSIFYELAGLIQE 176
>gi|340506305|gb|EGR32473.1| Ras family protein, putative [Ichthyophthirius multifiliis]
Length = 211
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 87/180 (48%), Positives = 124/180 (68%), Gaps = 5/180 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIG+SGVGKS +L+ F + ++ TIGVDFKIK + + GK +KL IWDT
Sbjct: 9 YDYLFKLLLIGNSGVGKSCMLMRFSENQFTNNFYNTIGVDFKIKTIQLNGKNIKLQIWDT 68
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQ+RF+T+T SYYRGA GI +V+D+T +++F N+ W E++ Y+ C ++LVGNK
Sbjct: 69 AGQDRFKTITCSYYRGAHGIAVVFDITDKQSFENVKG-WMVEIEKYAQENVC-RILVGNK 126
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP--SLLEEGS 187
D + R V +EG LA+ + ++E SAK+ ENV+Q F Q+A +IME SLL++ S
Sbjct: 127 TDMNENRQVQYQEGQELAQMYNLNYIEVSAKSGENVDQVFTQMAKQIMEKQGDSLLKKQS 186
>gi|324518786|gb|ADY47204.1| Ras-related protein Rab-10 [Ascaris suum]
Length = 200
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/207 (44%), Positives = 131/207 (63%), Gaps = 12/207 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPT----IGVDFKIKLLTVAGKRLK 63
++ YD FK+LLIGDSGVGK+S++ F + D SPT IG+DFKIK + V GKR+K
Sbjct: 2 AHKYDFLFKLLLIGDSGVGKTSIIHRF---TEDAFSPTYISTIGIDFKIKTIEVRGKRIK 58
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERF T+T+SYYRGA GI++VYD+T +F N++ W + ++L+++ +D K
Sbjct: 59 LQIWDTAGQERFHTITTSYYRGAMGIVVVYDITDEGSFDNIAK-WLRYIELHAS-EDVQK 116
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+L+ NK D R VS E G +AK HG FLE SA++ N+++ F LA I+ +
Sbjct: 117 ILLANKCDVIERRAVSSERGEKIAKAHGIKFLETSARSNINIQKAFGDLAEAILNKVTGD 176
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGCC 210
E+ V K ++ S GCC
Sbjct: 177 EQ---VEKTATVRPGISRTSTKRIGCC 200
>gi|156383922|ref|XP_001633081.1| predicted protein [Nematostella vectensis]
gi|156220146|gb|EDO41018.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDFLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ QD KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNDKSFENIKN-WIRNIEEHAS-QDVEKMVL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + R VS+E G LA E+G F+E SAK NVE+ F LA I
Sbjct: 120 GNKCDMEDRRQVSKERGEQLAVEYGIKFMETSAKASINVEEAFFTLARDI 169
>gi|289742273|gb|ADD19884.1| Rab protein 8 [Glossina morsitans morsitans]
Length = 207
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 18/202 (8%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T+ ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITQEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK + + +R VSRE G LA E+G F+E SAK NVE+ F LA I
Sbjct: 120 GNKCELNEKRQVSRERGEQLAVEYGIKFMETSAKASINVEEAFLTLASDI---------- 169
Query: 187 SNVVKRNILKQKPENQSPPIGG 208
+ ++++ E +PP GG
Sbjct: 170 -----KAKMEKRMEANNPPKGG 186
>gi|45185452|ref|NP_983169.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|44981141|gb|AAS50993.1| ABR220Wp [Ashbya gossypii ATCC 10895]
gi|374106372|gb|AEY95282.1| FABR220Wp [Ashbya gossypii FDAG1]
Length = 204
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 98/205 (47%), Positives = 127/205 (61%), Gaps = 4/205 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++ YD FK+LLIGDSGVGKS LL+ F + +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y T VK+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFDNMK-TWLQEIDRYGT-AGVVKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE-E 185
GNK D ++VV E A LE SA NVE+ F +A +I E S + E
Sbjct: 120 GNKNDLKDKKVVDFEVAREFADSLNIPVLETSALDSSNVEEAFLTMARQIKETMSHQQKE 179
Query: 186 GSNVVKRNILKQKPENQSPPIGGCC 210
++ + K ++ + GGCC
Sbjct: 180 SGKKDDKSGVNLKGQSLANSGGGCC 204
>gi|432092263|gb|ELK24887.1| Ras-related protein Rab-8B [Myotis davidii]
Length = 207
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-LDVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSTNVEEAFFTLARDIM 170
>gi|440633729|gb|ELR03648.1| hypothetical protein GMDG_06296 [Geomyces destructans 20631-21]
Length = 253
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 93/173 (53%), Positives = 116/173 (67%), Gaps = 9/173 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 57 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 113
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ ++T + K
Sbjct: 114 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFSNVEQHAT-EGVNK 171
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+L+GNK D D +R VS E G ALA E G FLE SAK NVE+ F LA I
Sbjct: 172 ILIGNKCDWDDKRTVSTERGQALADELGIPFLEVSAKANINVEKAFFSLAADI 224
>gi|294658349|ref|XP_460687.2| DEHA2F07568p [Debaryomyces hansenii CBS767]
gi|202953065|emb|CAG89024.2| DEHA2F07568p [Debaryomyces hansenii CBS767]
Length = 207
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/180 (50%), Positives = 119/180 (66%), Gaps = 9/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S S SYD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 2 SGRAPSRSYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIESN 58
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT TF N+ + W V ++ N
Sbjct: 59 GKKIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRTFENVEN-WYSTVTQHA-N 116
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D LVGNK D + R VS+E+G LA + FLE SAK+ ENV+ F +LA I E
Sbjct: 117 EDAQIFLVGNKCDDEENRQVSKEQGQELASKLNIPFLEASAKSNENVDPIFYELAGIIQE 176
>gi|284055664|pdb|3JZA|A Chain A, Crystal Structure Of Human Rab1b In Complex With The Gef
Domain Of DrraSIDM FROM LEGIONELLA PNEUMOPHILA
gi|302148858|pdb|3NKV|A Chain A, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|302148859|pdb|3NKV|B Chain B, Crystal Structure Of Rab1b Covalently Modified With Amp At
Y77
gi|442570813|pdb|4HLQ|B Chain B, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570815|pdb|4HLQ|D Chain D, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570817|pdb|4HLQ|F Chain F, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570819|pdb|4HLQ|H Chain H, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
gi|442570821|pdb|4HLQ|J Chain J, Crystal Structure Of Human Rab1b Bound To Gdp And Bef3 In
Complex With The Gap Domain Of Tbc1d20 From Homo Sapiens
Length = 175
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 6 GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKL 64
G YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 1 GHMPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 60
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKL 118
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
LVGNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 119 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|301095866|ref|XP_002897032.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
gi|262108461|gb|EEY66513.1| Rab8 family GTPase, putative [Phytophthora infestans T30-4]
Length = 207
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 92/207 (44%), Positives = 130/207 (62%), Gaps = 4/207 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
S+ YDL K+LLIGDSGVGKS +L+ + S TIG+DFK+K + V GKR+KL
Sbjct: 3 HSSKYDLLIKLLLIGDSGVGKSCVLLRYSDDSFTTSFITTIGIDFKVKTIDVDGKRIKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI++VYDVT +F N+ + W ++ + + + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILMVYDVTDDHSFQNIRN-WMTQI-RQNASSNVNKIL 120
Query: 126 VGNKVDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
+GNK D D SER V+ ++G LA E G F E SAK+ EN+++ F +A+ I + + E
Sbjct: 121 IGNKCDVDPSERAVTTKQGQDLADEFGIKFFETSAKSNENIDEAFRSIAVDIQKRLAESE 180
Query: 185 EGSNVVKRNILKQKPENQSPPIGGCCS 211
V + E+Q GCC+
Sbjct: 181 HDRLDVANGSKFRVDESQDQTKDGCCA 207
>gi|156383574|ref|XP_001632908.1| predicted protein [Nematostella vectensis]
gi|156219971|gb|EDO40845.1| predicted protein [Nematostella vectensis]
Length = 184
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/177 (49%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
DL FK+LLIGDSGVGK+ ++ F ++ + TIG+DFKIK L + GK++KL IWDTA
Sbjct: 7 DLFFKLLLIGDSGVGKTCIIFRFADNTFNPSFISTIGIDFKIKTLELGGKKIKLQIWDTA 66
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERF T+T++YYRGA GI+LVYDVT ++F+N+S W K++D ++ N+D +MLVGNK
Sbjct: 67 GQERFHTITTAYYRGAMGIMLVYDVTNEKSFSNISK-WLKKIDDHA-NEDVKRMLVGNKC 124
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEE 185
D +RV+S+ +G LA +G F+E SA + NVE+ F L I+ P +EE
Sbjct: 125 DMYDKRVISQTKGEQLASSYGISFIETSALSNINVEKSFVVLTEDILNAVCPPTVEE 181
>gi|46123663|ref|XP_386385.1| hypothetical protein FG06209.1 [Gibberella zeae PH-1]
gi|408398160|gb|EKJ77294.1| hypothetical protein FPSE_02569 [Fusarium pseudograminearum CS3096]
Length = 203
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N+++ F LA I
Sbjct: 121 IGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 171
>gi|6624302|dbj|BAA88497.1| small GTP-binding protein [Carica papaya]
Length = 211
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 88/172 (51%), Positives = 118/172 (68%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVAIDGRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
DTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 RDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D R VS+EEG AKEHG LFLE SA+T +NVE+ F + A KI++
Sbjct: 118 GNKSDLSHRRAVSKEEGEQFAKEHGLLFLEASARTAQNVEEAFIRTAAKILQ 169
>gi|432091097|gb|ELK24309.1| Ras-related protein Rab-1B [Myotis davidii]
Length = 212
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/202 (48%), Positives = 125/202 (61%), Gaps = 9/202 (4%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 17 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTA 76
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 77 GQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNKS 134
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGSN 188
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 135 DLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAATGG-- 192
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 193 --ERPNLKIDSTPVKPAGGGCC 212
>gi|198415359|ref|XP_002126732.1| PREDICTED: similar to Ras-related protein ORAB-1 [Ciona
intestinalis]
Length = 204
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 124/205 (60%), Gaps = 12/205 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 7 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A FLE SAKT NVEQ F +A +I G
Sbjct: 125 CDLTTKKVVDYTTAKEYADTLKIPFLETSAKTANNVEQAFMTMAAEIKN-----RMGPGT 179
Query: 190 VKRNILKQKPENQSPPI----GGCC 210
K + S P+ GGCC
Sbjct: 180 AASPGQSNKVDISSKPVDGKQGGCC 204
>gi|154343265|ref|XP_001567578.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134064910|emb|CAM43019.1| putative ras-related protein rab-2a [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 212
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 115/165 (69%), Gaps = 3/165 (1%)
Query: 15 FKILLIGDSGVGKSSLLVSFISSSVDDLSP-TIGVDFKIKLLTVAGKRLKLTIWDTAGQE 73
FK ++IGDSGVGKS LL+ F + L TIGV+F +L+++ G+ +KL IWDTAGQE
Sbjct: 8 FKYIIIGDSGVGKSCLLLQFTDKRFEPLHDLTIGVEFGARLISIQGRSVKLQIWDTAGQE 67
Query: 74 RFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRD 133
FR++T SYYRGA G +LVYDVTRR+TFT+L W ++ + N V ML+GNK D D
Sbjct: 68 SFRSITRSYYRGASGALLVYDVTRRDTFTHLQS-WLEDAKA-NANTALVIMLIGNKCDLD 125
Query: 134 SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
S+R VSREEG A A+ +G +F+E SAKT +NV+ F Q A I +
Sbjct: 126 SKRQVSREEGEAFARSNGLMFMETSAKTSKNVDDAFLQTAALIYD 170
>gi|442570869|pdb|4I1O|A Chain A, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570871|pdb|4I1O|C Chain C, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570873|pdb|4I1O|E Chain E, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
gi|442570875|pdb|4I1O|G Chain G, Crystal Structure Of The Legionella Pneumophila Gap Domain
Of Lepb In Complex With Rab1b Bound To Gdp And Bef3
Length = 181
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 115/172 (66%), Gaps = 3/172 (1%)
Query: 6 GQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKL 64
G YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 1 GHMPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 60
Query: 65 TIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKM 124
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+
Sbjct: 61 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKL 118
Query: 125 LVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
LVGNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 119 LVGNKSDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 170
>gi|340726840|ref|XP_003401760.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
terrestris]
gi|350421636|ref|XP_003492907.1| PREDICTED: ras-related protein Rab-8A-like isoform 2 [Bombus
impatiens]
Length = 210
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 93/202 (46%), Positives = 132/202 (65%), Gaps = 6/202 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK + +R VS+E G LA E+G F+E SAK+ NVE+ F LA I ++ L+E
Sbjct: 120 GNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDIKAKMEKKLKE 179
Query: 186 GSNVVK--RNILKQKPENQSPP 205
SN K + LK + PP
Sbjct: 180 ASNPPKGGGHQLKASEPQRKPP 201
>gi|302895243|ref|XP_003046502.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256727429|gb|EEU40789.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 203
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N+++ F LA I
Sbjct: 121 IGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 171
>gi|224102877|ref|XP_002312839.1| predicted protein [Populus trichocarpa]
gi|118481778|gb|ABK92828.1| unknown [Populus trichocarpa]
gi|222849247|gb|EEE86794.1| predicted protein [Populus trichocarpa]
Length = 211
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 133/217 (61%), Gaps = 22/217 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDARPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-----VPS 181
GNK D R VS+EEG AKE+G LFLE SA+T +NVE+ F A KI++ V
Sbjct: 118 GNKCDLAHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIGTAGKILQNIQEGVFD 177
Query: 182 LLEEGSNVVKRNILKQKPENQS-------PPIGGCCS 211
+ E S + + +P+ S GGCCS
Sbjct: 178 VSNESSGI---KVGYGRPQGASGARDGTVAQRGGCCS 211
>gi|126277017|ref|XP_001366139.1| PREDICTED: ras-related protein Rab-8B-like [Monodelphis domestica]
Length = 207
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKSDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEAFFTLARDIM 170
>gi|169784109|ref|XP_001826516.1| GTP-binding protein ypt2 [Aspergillus oryzae RIB40]
gi|83775261|dbj|BAE65383.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391868528|gb|EIT77742.1| GTP-binding protein [Aspergillus oryzae 3.042]
Length = 206
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/210 (46%), Positives = 131/210 (62%), Gaps = 14/210 (6%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ +++ + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFQNIR-TWFSNVEQHAS-EGVHK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+L+GNK D + +R VS E+G LA E G FLE SAK N+E+ F LA +I M+
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQQLADELGIPFLEVSAKNNINIEKAFYNLASEIKKGMDTS 178
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ GS V +I +Q P G CC
Sbjct: 179 KSEQPGSQGV--SIDQQGPGPNGSTGGKCC 206
>gi|57997511|emb|CAI46103.1| hypothetical protein [Homo sapiens]
Length = 209
Score = 167 bits (422), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|241958088|ref|XP_002421763.1| Ras-related protein Sec4; small GTPase of Rab family, putative
[Candida dubliniensis CD36]
gi|223645108|emb|CAX39704.1| Ras-related protein Sec4 [Candida dubliniensis CD36]
Length = 210
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GKR+KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++
Sbjct: 58 SKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVEN-WFQTVTQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N+D LVGNK D + R VS+E+G LA + FLE SAK+ ENV+ F +LA I
Sbjct: 117 -NEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|68475230|ref|XP_718333.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|68475429|ref|XP_718237.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|353678099|sp|P0CY31.1|SEC4_CANAL RecName: Full=Ras-related protein SEC4
gi|353678100|sp|C4YL11.1|SEC4_CANAW RecName: Full=Ras-related protein SEC4
gi|353678101|sp|P0CY30.1|SEC4_CANAX RecName: Full=Ras-related protein SEC4
gi|2345152|gb|AAB67974.1| small GTP-binding protein SEC4p [Candida albicans]
gi|2642182|gb|AAC50022.1| Sec4p [Candida albicans]
gi|3859676|emb|CAA22013.1| ras-related protein sec4p [Candida albicans]
gi|46439996|gb|EAK99307.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46440096|gb|EAK99406.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|238879654|gb|EEQ43292.1| GTP-binding protein SAS1 [Candida albicans WO-1]
Length = 210
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GKR+KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++
Sbjct: 58 SKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVEN-WFQTVTQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N+D LVGNK D + R VS+E+G LA + FLE SAK+ ENV+ F +LA I
Sbjct: 117 -NEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNVPFLEASAKSNENVDSIFYELASII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|350534422|ref|NP_001234140.1| ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
gi|5669640|gb|AAD46405.1|AF096249_1 ethylene-responsive small GTP-binding protein [Solanum
lycopersicum]
Length = 216
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S+ TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSLTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVEQ F +A I + L + S
Sbjct: 130 ADMDESKRAVPTAKGQALADEYGIKFFETSAKTNLNVEQVFFSIARDIKQ--RLADTDSK 187
Query: 189 VVKRNILKQKPE-----NQSPPIGGCC 210
+ +PE +Q+ CC
Sbjct: 188 AEPSTLKINQPEAGAGGSQTSQKSACC 214
>gi|363755488|ref|XP_003647959.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
gi|356891995|gb|AET41142.1| hypothetical protein Ecym_7305 [Eremothecium cymbalariae
DBVPG#7215]
Length = 213
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/180 (52%), Positives = 120/180 (66%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
S++ YD K+LL+GDSGVGKS LLV F+ D SP TIG+DFKIK + +
Sbjct: 9 STTPGGKGYDSIMKVLLVGDSGVGKSCLLVRFVE---DKFSPSFITTIGIDFKIKTVDID 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W V+ ++T
Sbjct: 66 GKKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFENIRQ-WFSTVNQHAT- 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+D +LVGNK D D+ R V+ E+G +LAKE G F+E SAK ENV F LA I E
Sbjct: 124 EDAQILLVGNKKDMDT-RAVTYEQGESLAKELGVPFIEASAKDDENVSDIFFTLAKIIQE 182
>gi|407039382|gb|EKE39614.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 205
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/195 (48%), Positives = 123/195 (63%), Gaps = 20/195 (10%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + D TIGVDFKIK + + GK +KL IWDTA
Sbjct: 6 DYLFKLLLIGDSGVGKSCLLLRFADDTYTDTHIATIGVDFKIKTVQIDGKNIKLQIWDTA 65
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGAQGII+VY V +TF N+ W +E++ Y++ + +K+L+GNK
Sbjct: 66 GQERFRTITSSYYRGAQGIIVVYSVIDLQTFQNVRQ-WLQEIERYAS-ETVIKLLIGNKC 123
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D + ER V+ E+G LA F+E SAK NV++ F ++A IM
Sbjct: 124 DLEDERAVTVEQGQELANSLNVSFMEASAKKSLNVDELFIKIATDIM------------- 170
Query: 191 KRNILKQKPENQSPP 205
+NI +P N S P
Sbjct: 171 -KNI---QPANTSKP 181
>gi|451996574|gb|EMD89040.1| hypothetical protein COCHEDRAFT_1140780 [Cochliobolus
heterostrophus C5]
Length = 206
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/209 (47%), Positives = 132/209 (63%), Gaps = 12/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +FTN+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFANVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME--VPS 181
+L+GNK D + +R VS E+G ALA E G FLE SAK+ NV++ F LA I + + +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDIKKRLIDT 178
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ S K ++ Q N G CC
Sbjct: 179 ARTDQSATPKVDVSGQDGGNAGMG-GKCC 206
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/190 (44%), Positives = 127/190 (66%), Gaps = 8/190 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLK 63
S + +YD FK+LLIGDSGVGK+ L++ F + ++ TIG+DFKI+ + + GK++K
Sbjct: 1 SAMAKAYDHLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L +WDTAGQERF+T+T++YYRGA GIILVYD+T ++F N+ + W K + + + +
Sbjct: 61 LQVWDTAGQERFKTITTAYYRGAMGIILVYDITDEKSFENIQN-WMKSIK-ENASAGVER 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+L+GNK D +++R V +E+ LA+EHG F E SAK+ NV++ F LA I LL
Sbjct: 119 LLLGNKCDMEAKRKVQKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDI-----LL 173
Query: 184 EEGSNVVKRN 193
+ G +K N
Sbjct: 174 KSGGRRLKNN 183
>gi|145552362|ref|XP_001461857.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834352|emb|CAI44523.1| rab_B52 [Paramecium tetraurelia]
gi|124429693|emb|CAK94484.1| unnamed protein product [Paramecium tetraurelia]
Length = 208
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/211 (42%), Positives = 133/211 (63%), Gaps = 7/211 (3%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISS--SVDDLSPTIGVDFKIKLLTVAGK 60
S G S YD K+++IGDSGVGK+++L F S+ ++ T+GVDFKIK + GK
Sbjct: 2 SRQGNSQDYDWLVKVIVIGDSGVGKTNVLSQFCDQKFSITHMA-TLGVDFKIKTIEAEGK 60
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRT+T +YY+GAQG+IL Y V R++F N+ D W K + + + D
Sbjct: 61 KLKLQIWDTAGQERFRTITKTYYKGAQGVILTYSVIDRQSFQNV-DGWLKSIQENTNSSD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
+L+GNK D +ER V+ EEG+ L+++ F E SAK+ N+ + F++L+ +I++
Sbjct: 120 VQLVLLGNKADMSAERKVTLEEGMKLSQQFNIPFFETSAKSNMNINEAFQELSQRIIQTL 179
Query: 181 SLLEEGSNVVKRNI-LKQKPENQSPPIGGCC 210
S ++ +N RN+ +K G CC
Sbjct: 180 SKMQ--ANDENRNLNIKPNGGEDKHKTGPCC 208
>gi|50306647|ref|XP_453297.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642431|emb|CAH00393.1| KLLA0D05313p [Kluyveromyces lactis]
Length = 204
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 126/202 (62%), Gaps = 4/202 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + +D TIGVDFKIK + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTNDYISTIGVDFKIKTVELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D + T +K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVK-TWLQEIDRFGT-AGVLKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-VPSLLEEGSN 188
D ++VV E A G F+E SA NVE+ F + +I E V ++
Sbjct: 123 NDLTDKKVVDTEVAKEFADSIGIPFIETSALDSSNVEEAFLIMTKQIKESVAKQQKDNGR 182
Query: 189 VVKRNILKQKPENQSPPIGGCC 210
++ + K ++ + GGCC
Sbjct: 183 AEDKSNVNLKGQSLTGSNGGCC 204
>gi|428672259|gb|EKX73173.1| Ras-related protein Rab1b small GTP-binding protein [Babesia equi]
Length = 220
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/164 (50%), Positives = 115/164 (70%), Gaps = 2/164 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGCGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNITIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +++ Y+T+ + K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLTDIERYATS-NVSKLLIGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA 173
+D RVV+ EE +A+ H ++E SAKT NVE+ F +A
Sbjct: 123 IDLADNRVVTSEEAKQVAEAHNMNYIEASAKTDSNVEKAFLSIA 166
>gi|403178259|ref|XP_003336706.2| hypothetical protein PGTG_18502 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375164078|gb|EFP92287.2| hypothetical protein PGTG_18502 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 246
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/183 (49%), Positives = 120/183 (65%), Gaps = 15/183 (8%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISS-------------SVDDLSPTIGVDFKIKLLTVAGK 60
+ K+LLIG S V + F+ S ++ S TIGVDFK KL+ GK
Sbjct: 30 TLKLLLIGSSSVQSILPSICFMDPQTRKRSAEYQVFLSAEESSATIGVDFKFKLIDHKGK 89
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS-TNQ 119
R KL+IWDTAGQERFRTLTSSYYRGAQG++LVYDVT R +F +L W E+D ++ + Q
Sbjct: 90 RYKLSIWDTAGQERFRTLTSSYYRGAQGVLLVYDVTNRASFESLPS-WFSELDTFAHSPQ 148
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D V+++VGNKVD+D R VS EEG A A ++ ++F E S KTR+ V++ FE + KI++
Sbjct: 149 DVVRVIVGNKVDKDESRTVSTEEGRAFASDNHAMFFETSVKTRKGVDEVFEAVVDKIIDS 208
Query: 180 PSL 182
SL
Sbjct: 209 ISL 211
>gi|350578544|ref|XP_001929064.4| PREDICTED: ras-related protein Rab-8B-like [Sus scrofa]
Length = 207
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 84/171 (49%), Positives = 122/171 (71%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVERMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSMNVEEAFFILARDIM 170
>gi|399163151|gb|AFP33151.1| rab-8, partial [Caenorhabditis elegans]
Length = 210
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 124/184 (67%), Gaps = 6/184 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 1 AKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQI 60
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GIILVYD+T +F N+ + W + ++ ++ + D +M++
Sbjct: 61 WDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAAS-DVERMII 118
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLL 183
GNK D + R VSR+ G LA E+G+ FLE SAK N+++ F LA I ME +
Sbjct: 119 GNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMR 178
Query: 184 EEGS 187
GS
Sbjct: 179 AGGS 182
>gi|390346094|ref|XP_003726477.1| PREDICTED: ras-related protein Rab-1A isoform 1 [Strongylocentrotus
purpuratus]
Length = 206
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 99/206 (48%), Positives = 127/206 (61%), Gaps = 12/206 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKVIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A + FLE SAK NVEQ F +A +I P + GS
Sbjct: 126 CDLTTKKVVDYTTAKEYADQLEIPFLETSAKNATNVEQAFMTMAAEIKNRMGPGSVPSGS 185
Query: 188 NVVKRNILKQKPENQS--PPIGGCCS 211
+ K N P P GCCS
Sbjct: 186 SHDKIN-----PSTTPVKPSGSGCCS 206
>gi|25150215|ref|NP_491199.2| Protein RAB-8 [Caenorhabditis elegans]
gi|40788402|dbj|BAD07034.1| Rab8 [Caenorhabditis elegans]
gi|351060636|emb|CCD68351.1| Protein RAB-8 [Caenorhabditis elegans]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/184 (47%), Positives = 124/184 (67%), Gaps = 6/184 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GIILVYD+T +F N+ + W + ++ ++ + D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAAS-DVERMII 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLL 183
GNK D + R VSR+ G LA E+G+ FLE SAK N+++ F LA I ME +
Sbjct: 120 GNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEMR 179
Query: 184 EEGS 187
GS
Sbjct: 180 AGGS 183
>gi|344234197|gb|EGV66067.1| ras-domain-containing protein [Candida tenuis ATCC 10573]
Length = 205
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|225718260|gb|ACO14976.1| Ras-related protein Rab-8A [Caligus clemensi]
Length = 212
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 86/183 (46%), Positives = 128/183 (69%), Gaps = 4/183 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFYNIKN-WIRNIEEHASS-DVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI-MEVPSLLEE 185
GNK D + R V++E+G LA E+G F+E SAK+ NVE+ F LA I ++ L+E
Sbjct: 120 GNKCDMNDRRNVTKEKGEELAIEYGIKFMETSAKSSINVEEAFFTLARDIKAKMEKRLQE 179
Query: 186 GSN 188
SN
Sbjct: 180 ASN 182
>gi|348500156|ref|XP_003437639.1| PREDICTED: ras-related protein Rab-8B-like [Oreochromis niloticus]
Length = 206
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 85/171 (49%), Positives = 121/171 (70%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ LL F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHAS-ADVEKMVL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D + +R VS+E G LA ++G FLE SAK+ NVE+ F LA IM
Sbjct: 120 GNKCDMNDKRQVSKERGEKLAIDYGIKFLETSAKSSINVEEGFYTLARDIM 170
>gi|324529832|gb|ADY49047.1| Ras-related protein Rab-2, partial [Ascaris suum]
Length = 212
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDSKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLTS-WLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|12084567|pdb|1G17|A Chain A, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
gi|12084568|pdb|1G17|B Chain B, Crystal Structure Of Sec4-Guanosine-5'-(Beta,Gamma)-
Imidotriphosphate
Length = 170
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 94/171 (54%), Positives = 119/171 (69%), Gaps = 10/171 (5%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIW 67
D KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + GK++KL IW
Sbjct: 1 DSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDINGKKVKLQIW 57
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRT+T++YYRGA GIILVYD+T TFTN+ W K V+ ++ N + +LVG
Sbjct: 58 DTAGQERFRTITTAYYRGAMGIILVYDITDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVG 115
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
NK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 116 NKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 165
>gi|400597721|gb|EJP65451.1| RAB/GTPase protein [Beauveria bassiana ARSEF 2860]
Length = 206
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 89/171 (52%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 8 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 64
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 65 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFQNVEQHAT-EGVNKIL 122
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RV+S E+G ALA E G FLE SAK+ N+++ F LA I
Sbjct: 123 IGNKCDWEDKRVISEEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 173
>gi|391333703|ref|XP_003741250.1| PREDICTED: ras-related protein Rab-2A-like [Metaseiulus
occidentalis]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 98/217 (45%), Positives = 134/217 (61%), Gaps = 23/217 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIEKKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQEAFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + R V +EEG A A+EHG +F+E SAKT +NVE F A E+ +++G
Sbjct: 118 GNKSDLEGRREVKKEEGEAFAQEHGLVFMETSAKTADNVEDAFINTA---KEIYDKIQDG 174
Query: 187 SNVVKR--NILKQKPE--NQSP---------PIGGCC 210
+ N +K P+ N SP GGCC
Sbjct: 175 VFDINNEANGIKIGPQQANTSPGGGNPSGNTQSGGCC 211
>gi|356570243|ref|XP_003553299.1| PREDICTED: ras-related protein RABB1b-like [Glycine max]
Length = 211
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/217 (44%), Positives = 134/217 (61%), Gaps = 22/217 (10%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ + +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTIDSRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS-WLEDARQHA-NPNMTIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D R VS+EEG AKE+G LFLE SA+T +NVE+ F + A KI++ ++EG
Sbjct: 118 GNKCDLSHRRAVSKEEGEQFAKENGLLFLEASARTAQNVEEAFIRTAGKILQN---IQEG 174
Query: 187 SNVVKR-----NILKQKPENQS-------PPIGGCCS 211
V + +P+ Q GGCCS
Sbjct: 175 VFDVSNESFGIKVGYGRPQGQPGARDGTVSARGGCCS 211
>gi|115495993|ref|NP_001069701.1| ras-related protein Rab-1B [Bos taurus]
gi|110832072|sp|Q2HJH2.1|RAB1B_BOVIN RecName: Full=Ras-related protein Rab-1B
gi|88682888|gb|AAI05394.1| RAB1B, member RAS oncogene family [Bos taurus]
gi|440907365|gb|ELR57519.1| Ras-related protein Rab-1B [Bos grunniens mutus]
Length = 201
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 97/203 (47%), Positives = 125/203 (61%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK GGCC
Sbjct: 182 ---ERPNLKIDSTPVKQAGGGCC 201
>gi|145348815|ref|XP_001418839.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|308805733|ref|XP_003080178.1| YptC1 (ISS) [Ostreococcus tauri]
gi|116058638|emb|CAL54345.1| YptC1 (ISS) [Ostreococcus tauri]
gi|144579069|gb|ABO97132.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 203
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 95/198 (47%), Positives = 121/198 (61%), Gaps = 18/198 (9%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTGTYISTIGVDFKIRTVELEGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F + W E+D Y+ N++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDMESFEAVKG-WLNEIDRYA-NENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VV A A E G F+E SAK NVEQ F +A +I
Sbjct: 123 SDLTSQKVVDYATAKAFADEIGIPFIETSAKNATNVEQAFMTMANEI------------- 169
Query: 190 VKRNILKQKPENQSPPIG 207
+N + +P+ + P G
Sbjct: 170 --KNRMASQPQMNAGPRG 185
>gi|452845509|gb|EME47442.1| hypothetical protein DOTSEDRAFT_69383 [Dothistroma septosporum
NZE10]
Length = 201
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 25/211 (11%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME---------VP 180
D ++VV A G FLE SAK NVEQ F +A +I E P
Sbjct: 123 SDMSDKKVVEYAVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 181 SL-LEEGSNVVKRNILKQKPENQSPPIGGCC 210
++ + +GSNV QS GGCC
Sbjct: 183 TVQVGQGSNV------------QSGSAGGCC 201
>gi|389743618|gb|EIM84802.1| ras-domain-containing protein [Stereum hirsutum FP-91666 SS1]
Length = 228
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 92/188 (48%), Positives = 121/188 (64%), Gaps = 6/188 (3%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLK 63
Q +S ++ K+LLIG+S VGKSSLL+ F D+ S TIGVDF++ + V GK++K
Sbjct: 4 QESSAPINVKLLLIGNSSVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMDVKGKKVK 63
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L+IWDTAGQERFRT+TSSYYRGAQGIILVYDV+ RE+F L W E++ Y + VK
Sbjct: 64 LSIWDTAGQERFRTITSSYYRGAQGIILVYDVSNRESFDALPR-WFSELETY-VSSSVVK 121
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
++VGNKVD++ R V E A LF+E SAKT V F + +I++ P L
Sbjct: 122 IIVGNKVDKEYSRQVPTAEAEQFAARQNCLFVEASAKTSVGVRDAFRNVVAQILDTPELW 181
Query: 184 EE-GSNVV 190
+ GS V
Sbjct: 182 DSAGSKAV 189
>gi|342885719|gb|EGU85701.1| hypothetical protein FOXB_03847 [Fusarium oxysporum Fo5176]
Length = 203
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 119/171 (69%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W + V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFQNVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +RVVS E+G ALA E G FLE SAK+ N+++ F LA I
Sbjct: 121 IGNKCDWEEKRVVSTEQGQALADELGIPFLEVSAKSNINIDKAFYSLAADI 171
>gi|403177656|ref|XP_003336121.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375172961|gb|EFP91702.2| GTP-binding protein ypt1 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 240
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 99/204 (48%), Positives = 126/204 (61%), Gaps = 8/204 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWDT
Sbjct: 41 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELEGKTVKLQIWDT 100
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT ++TFTN+ W E+D Y+ + K+LVGNK
Sbjct: 101 AGQERFRTITSSYYRGAHGIIVVYDVTDQDTFTNVKQ-WLHEIDRYAC-EGVNKLLVGNK 158
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP--SLLEEGS 187
D ++VV A + FLE SAK+ NVEQ F +A +I + + + GS
Sbjct: 159 SDLTQKKVVEYTVAKDFADQLTIPFLETSAKSATNVEQAFLTMAKQIKDRTGSTTVNTGS 218
Query: 188 NVVKRNILKQKPEN-QSPPIGGCC 210
N K + +N Q GCC
Sbjct: 219 N--KATLKVGAGQNVQQQQSSGCC 240
>gi|301610616|ref|XP_002934841.1| PREDICTED: ras-related protein Rab-8A [Xenopus (Silurana)
tropicalis]
Length = 207
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GKR+KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ ++++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKN-WIRNIEEHASS-DVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + +R VS+E+G LA E+G F+E SAK NVE F LA I
Sbjct: 120 GNKCDVNEKRQVSKEKGEKLALEYGIKFMETSAKANINVENAFFTLARDI 169
>gi|149244388|ref|XP_001526737.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449131|gb|EDK43387.1| GTP-binding protein ypt1 [Lodderomyces elongisporus NRRL YB-4239]
Length = 207
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALNIPFLETSALSSTNVEQAFYTMARQI 169
>gi|12084563|pdb|1G16|A Chain A, Crystal Structure Of Sec4-Gdp
gi|12084564|pdb|1G16|B Chain B, Crystal Structure Of Sec4-Gdp
gi|12084565|pdb|1G16|C Chain C, Crystal Structure Of Sec4-Gdp
gi|12084566|pdb|1G16|D Chain D, Crystal Structure Of Sec4-Gdp
Length = 170
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 118/167 (70%), Gaps = 10/167 (5%)
Query: 16 KILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIWDTAG 71
KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + GK++KL IWDTAG
Sbjct: 5 KILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDINGKKVKLQIWDTAG 61
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRT+T++YYRGA GIILVYD+T TFTN+ W K V+ ++ N + +LVGNK D
Sbjct: 62 QERFRTITTAYYRGAXGIILVYDITDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVGNKSD 119
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 120 XET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 165
>gi|241948557|ref|XP_002417001.1| RAB-family small GTP-binding protein, putative; YPT1-like RAB
GTPase, putative; transport GTPase, putative [Candida
dubliniensis CD36]
gi|223640339|emb|CAX44589.1| RAB-family small GTP-binding protein, putative [Candida
dubliniensis CD36]
Length = 207
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|871508|emb|CAA90082.1| small GTP-binding protein [Pisum sativum]
Length = 215
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/205 (46%), Positives = 128/205 (62%), Gaps = 7/205 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + + + S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSRSE 189
Query: 189 VVKRNILKQKPE---NQSPPIGGCC 210
I +Q P Q+ CC
Sbjct: 190 PQTIKINQQDPAANGGQAATKSACC 214
>gi|451847505|gb|EMD60812.1| hypothetical protein COCSADRAFT_97517 [Cochliobolus sativus ND90Pr]
Length = 206
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 119/173 (68%), Gaps = 9/173 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +FTN+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFANVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+L+GNK D + +R VS E+G ALA E G FLE SAK+ NV++ F LA I
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLAGDI 171
>gi|356983948|gb|AET43936.1| Ras-related protein Rab-1A, partial [Reishia clavigera]
Length = 195
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV + G FLE SAK NVEQ F +A +I
Sbjct: 126 CDLTTKKVVDYTTAKEYTDQLGIPFLETSAKNATNVEQAFMTMAAEI 172
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 129/204 (63%), Gaps = 11/204 (5%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 44 DYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTA 103
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT +ETF N+ W +E+D +++ + K+LVGNK
Sbjct: 104 GQERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQ-WLQEIDRFAS-EGVHKLLVGNKS 161
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME-VPSLLEEGSNV 189
D ++++VV + A + G FLE SAK NVEQ F +A +I + + + SN
Sbjct: 162 DLETKKVVDAKTAGEFATQLGIPFLETSAKNATNVEQAFLTMAKQIKDKMGAASSAQSNQ 221
Query: 190 VKRNI---LKQKPENQSPPIGGCC 210
K NI P+ S GCC
Sbjct: 222 AKANIKVGQAVAPQQSS----GCC 241
>gi|296471468|tpg|DAA13583.1| TPA: ras-related protein Rab-1B [Bos taurus]
Length = 197
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEI 169
>gi|344304693|gb|EGW34925.1| hypothetical protein SPAPADRAFT_133146 [Spathaspora passalidarum
NRRL Y-27907]
Length = 207
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|336369061|gb|EGN97403.1| hypothetical protein SERLA73DRAFT_184094 [Serpula lacrymans var.
lacrymans S7.3]
Length = 235
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
++ K+LLIG++ VGKSSLL+ F D+ S TIGVDF++ + V G+++KL+IWDT
Sbjct: 17 VNVKLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDT 76
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFR +TSSYYRGAQGIILVYDV RE+F L W E++ Y + V+++VGNK
Sbjct: 77 AGQERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNK 134
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
VD++ R V EG A A G+LF+E SAKT V F+ + +I+E P L
Sbjct: 135 VDKEQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPEL 187
>gi|328784309|ref|XP_003250431.1| PREDICTED: hypothetical protein LOC409456 [Apis mellifera]
Length = 1867
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 113/167 (67%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIDLDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T +ETF N+ W +E+D Y+ + + K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQETFNNVKQ-WLEEIDRYACD-NVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV A + G FLE SAK NVEQ F +A +I
Sbjct: 126 CDLHTKKVVDYTTAKEYADQLGIPFLETSAKNAMNVEQAFMTMAAEI 172
>gi|195399732|ref|XP_002058473.1| GJ14443 [Drosophila virilis]
gi|194142033|gb|EDW58441.1| GJ14443 [Drosophila virilis]
Length = 205
Score = 166 bits (421), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+LVGNK D +++VV A + G FLE SAK+ NVEQ F +A +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
S + ++ VK I + +P + GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTK--SGCC 205
>gi|330841005|ref|XP_003292496.1| Rab GTPase [Dictyostelium purpureum]
gi|325077244|gb|EGC30969.1| Rab GTPase [Dictyostelium purpureum]
Length = 207
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/212 (44%), Positives = 130/212 (61%), Gaps = 19/212 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K++KL IW
Sbjct: 2 YAFLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDNKQIKLQIW 59
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQE FR++T SYYRG+ G +LVYD+TRR+TF +L+ W K+ Y+ N + +L+G
Sbjct: 60 DTAGQESFRSITRSYYRGSAGALLVYDITRRDTFNHLT-CWLKDARSYA-NSNMTIILIG 117
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D +S+R VS EEG A+E+G +FLE SAKT NVE+ F A KI E +++G
Sbjct: 118 NKSDMESKRAVSYEEGKQFAEENGLIFLETSAKTASNVEEAFVNTAGKIYEK---IQKGD 174
Query: 188 NVVKRNIL---------KQKPENQSPPIGGCC 210
+ KQ ++ GGCC
Sbjct: 175 FDINNESFGIKLGAPQSKQDGQDNKQAAGGCC 206
>gi|170581209|ref|XP_001895584.1| Ras-related protein Rab-14 [Brugia malayi]
gi|158597400|gb|EDP35557.1| Ras-related protein Rab-14, putative [Brugia malayi]
Length = 213
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 116/177 (65%), Gaps = 4/177 (2%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKR 61
SS+G N Y FK ++IGD GVGKS LL F + D TIGV+F +++ V+G++
Sbjct: 2 SSNGPYN-YSYIFKYIIIGDMGVGKSCLLHQFTEKKFMADCPHTIGVEFGTRIIEVSGQK 60
Query: 62 LKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDC 121
+KL IWDTAGQERFR +T SYYRGA G ++VYD+TRR T+ +LS A +L T+ +
Sbjct: 61 IKLQIWDTAGQERFRAVTRSYYRGAAGALMVYDITRRSTYNHLSSWLADARNL--THPNT 118
Query: 122 VKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
V ++GNK D D +R V+ EE A A EHG FLECSAKT +NVE F A KI +
Sbjct: 119 VIFMIGNKSDLDGQRDVTFEEAKAFADEHGLTFLECSAKTGDNVEDAFLDTARKIYQ 175
>gi|448081057|ref|XP_004194794.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359376216|emb|CCE86798.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 130/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA ++G F E SAKT NVE+ F +A I + L + S
Sbjct: 130 ADMDESKRAVPTSKGQALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQ--RLADTDSK 187
Query: 189 VVKRNILKQKPE-----NQSPPIGGCC 210
+ I +P+ NQ+ CC
Sbjct: 188 AEPQTIKINQPDQAGGANQAAQKSACC 214
>gi|398390616|ref|XP_003848768.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
gi|339468644|gb|EGP83744.1| small GTP-binding protein [Zymoseptoria tritici IPO323]
Length = 201
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 25/211 (11%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME---------VP 180
D ++VV A G FLE SAK NVEQ F +A +I E P
Sbjct: 123 SDMADKKVVEYTVAKEFADSLGIPFLETSAKNANNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 181 SL-LEEGSNVVKRNILKQKPENQSPPIGGCC 210
++ + +GSNV QS GGCC
Sbjct: 183 TVQVGQGSNV------------QSGSAGGCC 201
>gi|453087322|gb|EMF15363.1| GTP-binding protein ypt1 [Mycosphaerella populorum SO2202]
Length = 201
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 25/211 (11%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME---------VP 180
D ++VV A G FLE SAK NVEQ F +A +I E P
Sbjct: 123 SDMSDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTTVNNKP 182
Query: 181 SL-LEEGSNVVKRNILKQKPENQSPPIGGCC 210
++ + +GSNV QS GGCC
Sbjct: 183 TVQVGQGSNV------------QSGSAGGCC 201
>gi|327505559|gb|AEA92307.1| Rab3 [Hevea brasiliensis]
Length = 216
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 96/207 (46%), Positives = 129/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNLNVEEVFFSIARDIKK--RLAETDSK 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
+ I +P+ Q+ CC
Sbjct: 188 AEPQTIKINQPDQAASGGQAAQKSACC 214
>gi|209877729|ref|XP_002140306.1| Ras family protein Rab-1A [Cryptosporidium muris RN66]
gi|209555912|gb|EEA05957.1| Ras family protein Rab-1A, putative [Cryptosporidium muris RN66]
Length = 211
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 129/210 (61%), Gaps = 7/210 (3%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S YD FK++LIGDSGVGKS LL+ F S D TIGVDF+ + + + K +K
Sbjct: 3 SMHQKEYDYLFKLVLIGDSGVGKSCLLLRFADDSFTDSYITTIGVDFRFRTVKIDDKIIK 62
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TS+YYRGA G++LVYD T + +F ++ D W EVD Y+T D K
Sbjct: 63 LQIWDTAGQERFRTITSAYYRGADGVVLVYDTTLQSSFDHIDD-WISEVDRYTT--DSSK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D ++R + + +G + E G F+E SAK NVE CF ++A +++E S
Sbjct: 120 ILVGNKCDLVAQRAIEQSQGEKKSSELGIDFIEASAKNSTNVEDCFIRIAKRLLEKKSQS 179
Query: 184 EEGSNVVKRNI-LKQKPENQ--SPPIGGCC 210
+ +NI L + +N S + CC
Sbjct: 180 GAVPRIAHQNIQLCETNDNSTFSSILSTCC 209
>gi|18447913|dbj|BAB84322.1| ras-related protein RAB8-1 [Nicotiana tabacum]
Length = 216
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 129/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NVE+ F +A I + L E +
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ--RLAESDNR 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
+ I +P+ Q+ CC
Sbjct: 188 AEPQTIRINQPDQGAGGAQTAQKSACC 214
>gi|26892279|gb|AAN86142.1|AF468652_1 RAB2B [Homo sapiens]
Length = 216
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|385304532|gb|EIF48546.1| gtp-binding protein sas1 [Dekkera bruxellensis AWRI1499]
Length = 207
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 91/211 (43%), Positives = 133/211 (63%), Gaps = 9/211 (4%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
S+ ++ ++D + K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKIK + + G
Sbjct: 2 SANRAKAFDRTMKLLLVGDSGVGKSCLLLRFVD---DKFNPSFITTIGIDFKIKTIDING 58
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL +WDTAGQERFRT+T++YYRGA GII+VYDV +F ++ W + V+ ++ +
Sbjct: 59 KRIKLQVWDTAGQERFRTITTAYYRGAMGIIIVYDVCDENSFESVKK-WYQTVNQHAKD- 116
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV 179
D LVGNK D + R VS ++G LA+E G F+E SAK+ NV + F +LA I+E
Sbjct: 117 DAQLFLVGNKCDDEESRQVSTKQGELLAQELGIPFMEASAKSSVNVSEVFYKLAGLILEK 176
Query: 180 PSLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
S E S ++ + + + GCC
Sbjct: 177 TSDEEAASEQSQKGNVDVRQAGHTVSXSGCC 207
>gi|336381842|gb|EGO22993.1| hypothetical protein SERLADRAFT_471590 [Serpula lacrymans var.
lacrymans S7.9]
Length = 241
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 13 LSFKILLIGDSGVGKSSLLVSFISSSV---DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
++ K+LLIG++ VGKSSLL+ F D+ S TIGVDF++ + V G+++KL+IWDT
Sbjct: 17 VNVKLLLIGNASVGKSSLLLRFSDEQWLPEDEASATIGVDFRVHKMEVNGRKVKLSIWDT 76
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFR +TSSYYRGAQGIILVYDV RE+F L W E++ Y + V+++VGNK
Sbjct: 77 AGQERFRGITSSYYRGAQGIILVYDVANRESFEALPK-WFSELETYVPDT-VVRIIVGNK 134
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSL 182
VD++ R V EG A A G+LF+E SAKT V F+ + +I+E P L
Sbjct: 135 VDKEQSRQVPTSEGSAYAIRSGALFVEASAKTSVGVRSAFQDVVGRILETPEL 187
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 92/206 (44%), Positives = 134/206 (65%), Gaps = 14/206 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D+ K+L+IGDSGVGK+ LL+ + + S TIG+DFKIK + + KR+KL IWDT
Sbjct: 8 FDMQIKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T+SY+RGAQGI+LVYDVT +++F ++ + W ++ ++ + K+L+GNK
Sbjct: 68 AGQERFRTITTSYFRGAQGILLVYDVTDKKSFNSIRN-WVAQIQQHA-DVAVNKILIGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D D +R VSREEG LA E+G F E SAK NVE+ F +A ++ + L+ +G N
Sbjct: 126 CDMDEDREVSREEGAQLAAEYGIQFFETSAKNDINVEKGFITIAREVKD--RLMADGPNP 183
Query: 190 VKR-----NILKQKPENQSPPIGGCC 210
R N+ Q + ++ GCC
Sbjct: 184 GSRAAGNVNLNAQASKKKT----GCC 205
>gi|340381310|ref|XP_003389164.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Amphimedon
queenslandica]
Length = 217
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/172 (50%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W + +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFEHLTS-WLDDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D D++R V EEG+A A+EHG +F+E SAKT NVE+ F A ++ +
Sbjct: 118 GNKSDLDAKRDVKFEEGLAFAQEHGLVFMETSAKTAANVEEAFINTAKEVYK 169
>gi|402875596|ref|XP_003901586.1| PREDICTED: ras-related protein Rab-2B [Papio anubis]
gi|355693102|gb|EHH27705.1| hypothetical protein EGK_17973 [Macaca mulatta]
gi|355778380|gb|EHH63416.1| hypothetical protein EGM_16382 [Macaca fascicularis]
gi|380817346|gb|AFE80547.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|383422287|gb|AFH34357.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
gi|384949918|gb|AFI38564.1| ras-related protein Rab-2B isoform 1 [Macaca mulatta]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|21361884|ref|NP_116235.2| ras-related protein Rab-2B isoform 1 [Homo sapiens]
gi|296214433|ref|XP_002753820.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Callithrix
jacchus]
gi|332223471|ref|XP_003260896.1| PREDICTED: ras-related protein Rab-2B isoform 2 [Nomascus
leucogenys]
gi|332841820|ref|XP_003314293.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Pan troglodytes]
gi|397466079|ref|XP_003804800.1| PREDICTED: ras-related protein Rab-2B [Pan paniscus]
gi|426376304|ref|XP_004054944.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Gorilla gorilla
gorilla]
gi|28436385|sp|Q8WUD1.1|RAB2B_HUMAN RecName: Full=Ras-related protein Rab-2B
gi|18088786|gb|AAH20839.1| RAB2B, member RAS oncogene family [Homo sapiens]
gi|119586786|gb|EAW66382.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119586787|gb|EAW66383.1| RAB2B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123993135|gb|ABM84169.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|124000125|gb|ABM87571.1| RAB2B, member RAS oncogene family [synthetic construct]
gi|189067491|dbj|BAG37750.1| unnamed protein product [Homo sapiens]
gi|410220922|gb|JAA07680.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220924|gb|JAA07681.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220926|gb|JAA07682.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220928|gb|JAA07683.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410220930|gb|JAA07684.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410268158|gb|JAA22045.1| RAB2B, member RAS oncogene family [Pan troglodytes]
gi|410328337|gb|JAA33115.1| RAB2B, member RAS oncogene family [Pan troglodytes]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|88193099|pdb|2FOL|A Chain A, Crystal Structure Of Human Rab1a In Complex With Gdp
Length = 191
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 115/170 (67%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL I
Sbjct: 19 SPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQI 78
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LV
Sbjct: 79 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLV 136
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 137 GNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 186
>gi|242047780|ref|XP_002461636.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
gi|241925013|gb|EER98157.1| hypothetical protein SORBIDRAFT_02g005790 [Sorghum bicolor]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 87/169 (51%), Positives = 119/169 (70%), Gaps = 3/169 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTI-GVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F + T G+DFK++ + + GKR+KL IWDT
Sbjct: 12 YDHLIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKVRTVELDGKRVKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
VD D++RVVS +G LA E+G F E SAKT +NVEQ F +A I +
Sbjct: 130 VDMDAKRVVSTAQGQKLADEYGIKFFETSAKTNQNVEQVFFTMARDIKQ 178
>gi|448508435|ref|XP_003865923.1| Sec4 GTPase [Candida orthopsilosis Co 90-125]
gi|380350261|emb|CCG20482.1| Sec4 GTPase [Candida orthopsilosis Co 90-125]
Length = 209
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSGKGASSKAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GK++KL +WDTAGQERFRT+T++YYRGA GI+++YDVT +F N+ + W + V ++
Sbjct: 58 SKGKKIKLQVWDTAGQERFRTITTAYYRGAMGIVIIYDVTDSRSFENVEN-WFQTVSQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N+D LVGNK D D R VS+E+G LA + FLE SAK+ ENV+ F +LA I
Sbjct: 117 -NEDAQIFLVGNKCDDDVNRQVSKEQGEELASKLHVPFLEASAKSNENVDAIFYELAGII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|354544141|emb|CCE40864.1| hypothetical protein CPAR2_109020 [Candida parapsilosis]
Length = 206
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|255719125|ref|XP_002555843.1| KLTH0G18788p [Lachancea thermotolerans]
gi|238937227|emb|CAR25406.1| KLTH0G18788p [Lachancea thermotolerans CBS 6340]
Length = 204
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 132/207 (63%), Gaps = 8/207 (3%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
++ YD FK+LLIGDSGVGKS LL+ F + +D TIGVDFKIK + + GK +KL I
Sbjct: 2 NSEYDYLFKLLLIGDSGVGKSCLLLRFSDDTYTNDYISTIGVDFKIKTVELDGKTVKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT ++F ++ +W +E+D Y+T +K++V
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDHDSFNDVK-MWLQEIDRYAT-AGVLKLMV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +R+V + A FLE SA NVE+ F +A +I E S+ ++
Sbjct: 120 GNKSDLQDKRMVEYDVAKEFADSLQIPFLETSALDSSNVEEAFLTMAKQIKE--SMAQQH 177
Query: 187 SNVVKRNI---LKQKPENQSPPIGGCC 210
+ K++ + K ++ S GGCC
Sbjct: 178 KDTGKKDDKANVNLKGQSLSNASGGCC 204
>gi|452986636|gb|EME86392.1| hypothetical protein MYCFIDRAFT_72600 [Pseudocercospora fijiensis
CIRAD86]
Length = 201
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 100/211 (47%), Positives = 126/211 (59%), Gaps = 25/211 (11%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME---------VP 180
D ++VV A G FLE SAK NVEQ F +A +I E P
Sbjct: 123 SDMTDKKVVEYTVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKERMGNTAINNKP 182
Query: 181 SL-LEEGSNVVKRNILKQKPENQSPPIGGCC 210
++ + +GSNV QS GGCC
Sbjct: 183 TVQVGQGSNV------------QSGSAGGCC 201
>gi|326501920|dbj|BAK06452.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 209
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/194 (49%), Positives = 119/194 (61%), Gaps = 11/194 (5%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
N +D FK+LLIGDS VGKS L+ F S VD TIGVDFKI+ L + GK +KL IW
Sbjct: 3 NEFDYLFKLLLIGDSSVGKSCFLLRFADDSYVDSYISTIGVDFKIRTLDMDGKTIKLQIW 62
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRT+TSSYYRGA GII+VYD+T E+F N+ W E++ Y+ N K+LVG
Sbjct: 63 DTAGQERFRTITSSYYRGAHGIIIVYDITDMESFNNVKQ-WLSEINKYA-NDSVRKLLVG 120
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NK D RVV A A E G FLE SAK NVE+ F ++ I + S
Sbjct: 121 NKCDLAESRVVDTAVAQAYADEIGIPFLETSAKESINVEEAFLAMSAAIKK--------S 172
Query: 188 NVVKRNILKQKPEN 201
+ +L++KP N
Sbjct: 173 KAGSQGVLERKPSN 186
>gi|291403498|ref|XP_002718096.1| PREDICTED: RAB2B protein [Oryctolagus cuniculus]
Length = 215
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|195053856|ref|XP_001993842.1| GH18937 [Drosophila grimshawi]
gi|193895712|gb|EDV94578.1| GH18937 [Drosophila grimshawi]
Length = 205
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+LVGNK D +++VV A + G FLE SAK+ NVEQ F +A +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTIAAEYANQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
S + ++ VK + + N+S GCC
Sbjct: 180 SSATDNASKVKIDQGRPVENNRS----GCC 205
>gi|354491201|ref|XP_003507744.1| PREDICTED: ras-related protein Rab-2B-like [Cricetulus griseus]
gi|344252330|gb|EGW08434.1| Ras-related protein Rab-2B [Cricetulus griseus]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|149692180|ref|XP_001505211.1| PREDICTED: ras-related protein Rab-2B-like [Equus caballus]
gi|335775161|gb|AEH58479.1| Ras-related protein Rab-2B-like protein [Equus caballus]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|73977362|ref|XP_532625.2| PREDICTED: ras-related protein Rab-2B isoform 1 [Canis lupus
familiaris]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|390478681|ref|XP_002761905.2| PREDICTED: ras-related protein Rab-8A isoform 1 [Callithrix
jacchus]
Length = 219
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 86/205 (41%), Positives = 132/205 (64%), Gaps = 6/205 (2%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GKR+KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYD+T ++F N+ + W + ++ +++ D KM++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRN-WIRNIEEHAS-ADVEKMIL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D + +R VS+E G LA ++G F+E SAK NVE F LA ++ + +++
Sbjct: 120 GNKCDVNDKRQVSKERGEKLALDYGIKFMETSAKANINVENAFFTLA---RDIKAKMDKK 176
Query: 187 SNVVKRNILKQKPENQSPPIGGCCS 211
R + ++ +Q+ G S
Sbjct: 177 LATAPRGVTRESKSHQTSRRGAAFS 201
>gi|167536047|ref|XP_001749696.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771844|gb|EDQ85505.1| predicted protein [Monosiga brevicollis MX1]
Length = 219
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 96/222 (43%), Positives = 135/222 (60%), Gaps = 28/222 (12%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTIW 67
Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++++ K++KL IW
Sbjct: 4 YSYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVSIDNKQIKLQIW 61
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V +L+G
Sbjct: 62 DTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARSHS-NPNMVIILIG 119
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI----------- 176
NK D DS+R V+REEG A+E+G +F+E SAK NVE+ F Q A I
Sbjct: 120 NKTDLDSKRAVTREEGEQFARENGLIFMETSAKNATNVEEAFIQTAQAIYSKIQENVFDI 179
Query: 177 ------MEVPSLLEEGSNVVKRNIL--KQKPENQSPPIGGCC 210
++V L G+ + ++ +QKP N GGCC
Sbjct: 180 KNEMNGIKVGPQLAGGAGSTRLDLRAPQQKPTNSEG--GGCC 219
>gi|388855810|emb|CCF50594.1| probable GTP-binding protein ypt1 [Ustilago hordei]
Length = 208
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
+G S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 AGLSADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TF+N+ W +E+D Y+ + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A + FLE SAK+ NVEQ F +A +I +
Sbjct: 120 LLVGNKSDLTNKKVVEYATAKEFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSS 179
Query: 184 EEGSNVVKRNILK----QKPENQSPPIGGCC 210
+ ++ LK Q QS GGCC
Sbjct: 180 TVNNQAGGKSTLKVGAGQNVSQQSN--GGCC 208
>gi|448085540|ref|XP_004195885.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
gi|359377307|emb|CCE85690.1| Piso0_005311 [Millerozyma farinosa CBS 7064]
Length = 208
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++VV A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKVVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|41055496|ref|NP_957436.1| ras-related protein Rab-1B [Danio rerio]
gi|28839092|gb|AAH47816.1| Zgc:56049 [Danio rerio]
gi|182889374|gb|AAI65006.1| Zgc:56049 protein [Danio rerio]
Length = 201
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 98/204 (48%), Positives = 128/204 (62%), Gaps = 11/204 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A FLE SAK NVEQ F +A +I + P G
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLAIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATTGGD 182
Query: 188 NVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 183 ---KPNLKIESTPVRQSG--GGCC 201
>gi|1370170|emb|CAA98162.1| RAB1E [Lotus japonicus]
Length = 203
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 95/203 (46%), Positives = 124/203 (61%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYIESYISTIGVDFKIRTVEQDAKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + R VS + A + G F+E SAK NVEQ F ++ I + +N
Sbjct: 123 CDLTANRAVSYDTAKEFADQIGIPFMETSAKDATNVEQAFMGMSASIKNRMASQPSANNG 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P P GCCS
Sbjct: 183 RPPTVQIRGQPVG---PKSGCCS 202
>gi|301784893|ref|XP_002927861.1| PREDICTED: ras-related protein Rab-2B-like [Ailuropoda melanoleuca]
gi|410961828|ref|XP_003987480.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Felis catus]
gi|281340558|gb|EFB16142.1| hypothetical protein PANDA_017701 [Ailuropoda melanoleuca]
Length = 216
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 97/210 (46%), Positives = 132/210 (62%), Gaps = 10/210 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+LVGNK D +++VV A + G FLE SAK+ NVEQ F +A +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCC 210
S + ++ VK I + +P + GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTK--SGCC 205
>gi|126134463|ref|XP_001383756.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
gi|126095905|gb|ABN65727.1| GTP-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 208
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|388516339|gb|AFK46231.1| unknown [Medicago truncatula]
Length = 215
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 117/170 (68%), Gaps = 4/170 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDEASFNNIRN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
D D S+R V EG ALA E+G F E SAKT NVE+ F +A I +
Sbjct: 130 ADMDESKRAVPTSEGQALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQ 179
>gi|448519756|ref|XP_003868152.1| Ypt1 protein [Candida orthopsilosis Co 90-125]
gi|380352491|emb|CCG22717.1| Ypt1 protein [Candida orthopsilosis]
Length = 207
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLADKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|354544807|emb|CCE41532.1| hypothetical protein CPAR2_800840 [Candida parapsilosis]
Length = 209
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSGKGASSKAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GK++KL +WDTAGQERFRT+T++YYRGA GI+++YDVT +F N+ + W + V ++
Sbjct: 58 SKGKKIKLQVWDTAGQERFRTITTAYYRGAMGIVIIYDVTDSRSFENVEN-WFQTVSQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N+D LVGNK D D R VS+E+G LA + FLE SAK+ ENV+ F +LA I
Sbjct: 117 -NEDAQIFLVGNKCDDDVNRQVSKEQGEELASKLHVPFLEASAKSNENVDAIFYELAGII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|149241639|pdb|2EQB|A Chain A, Crystal Structure Of The Rab Gtpase Sec4p, The Sec2p Gef
Domain, And Phosphate Complex
Length = 174
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 118/167 (70%), Gaps = 10/167 (5%)
Query: 16 KILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIWDTAG 71
KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + GK++KL +WDTAG
Sbjct: 9 KILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 65
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N + +LVGNK D
Sbjct: 66 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVGNKSD 123
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 MET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 169
>gi|68468983|ref|XP_721550.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|68469532|ref|XP_721279.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|15077428|gb|AAK83158.1|AF330211_1 small GTP-binding protein Ypt1p [Candida albicans]
gi|46443188|gb|EAL02472.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|46443470|gb|EAL02752.1| likely RAB family GTP binding protein involved in secretion
[Candida albicans SC5314]
gi|238879175|gb|EEQ42813.1| GTP-binding protein YPT1 [Candida albicans WO-1]
Length = 207
Score = 166 bits (420), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 89/170 (52%), Positives = 113/170 (66%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+N YD FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL I
Sbjct: 2 NNEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTPDYISTIGVDFKIRTIELDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y+T +K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLQEIDRYATG-GVMKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +++V A FLE SA + NVEQ F +A +I
Sbjct: 120 GNKADLSDKKIVEYTAAKEFADALDIPFLETSALSSTNVEQAFYTMARQI 169
>gi|395835767|ref|XP_003790844.1| PREDICTED: ras-related protein Rab-26 [Otolemur garnettii]
Length = 256
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 88/185 (47%), Positives = 123/185 (66%), Gaps = 8/185 (4%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
S G S+ YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 52 SLGGGSDLYDVAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGV 111
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YDVT + +F N+ W E+ Y+ +
Sbjct: 112 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTSKSSFDNIQ-AWLTEIQEYA-QHN 169
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---- 176
V ML+GNKVD E VV RE+G LAKE+G F+E SAKT NV+ F +A ++
Sbjct: 170 AVLMLLGNKVDSAHEHVVKREDGEKLAKEYGLPFMETSAKTGLNVDLAFTAIAKELKQRS 229
Query: 177 MEVPS 181
M+VPS
Sbjct: 230 MKVPS 234
>gi|195113911|ref|XP_002001511.1| GI10837 [Drosophila mojavensis]
gi|193918105|gb|EDW16972.1| GI10837 [Drosophila mojavensis]
Length = 205
Score = 166 bits (419), Expect = 6e-39, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 133/211 (63%), Gaps = 12/211 (5%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVP 180
+LVGNK D +++VV A + G FLE SAK+ NVEQ F +A +I + P
Sbjct: 120 LLVGNKSDLTTKKVVDHTTAAEYAHQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPP 179
Query: 181 SLLEEGSNVVKRNILKQKP-ENQSPPIGGCC 210
S + ++ VK I + +P EN GCC
Sbjct: 180 SSATDNASKVK--IDQGRPVENTR---SGCC 205
>gi|355714890|gb|AES05151.1| RAB2B, member RAS oncoprotein family [Mustela putorius furo]
Length = 220
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 7 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 64
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 65 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 122
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 123 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 172
>gi|154294011|ref|XP_001547449.1| secretion related Rab/GTPase [Botryotinia fuckeliana B05.10]
gi|347841066|emb|CCD55638.1| similar to GTP-binding protein [Botryotinia fuckeliana]
Length = 203
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 118/173 (68%), Gaps = 9/173 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +FTN+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFSNVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+L+GNK D + +RVVS E G LA E G FLE SAK+ NVE+ F LA I
Sbjct: 119 ILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADI 171
>gi|156035711|ref|XP_001585967.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980]
gi|154698464|gb|EDN98202.1| GTP-binding protein SAS1 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 203
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 92/173 (53%), Positives = 118/173 (68%), Gaps = 9/173 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
+ +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 TRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT +FTN+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFTNIR-TWFSNVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+L+GNK D + +RVVS E G LA E G FLE SAK+ NVE+ F LA I
Sbjct: 119 ILIGNKCDWEDKRVVSTERGQQLADELGIPFLEVSAKSNINVEKAFYSLAADI 171
>gi|72078956|ref|XP_782537.1| PREDICTED: ras-related protein Rab-2A-like isoform 2
[Strongylocentrotus purpuratus]
Length = 212
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/172 (50%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I +
Sbjct: 118 GNKSDLEARRDVKKEEGEAFAREHGLIFMETSAKTAANVEEAFINTAKEIYQ 169
>gi|83415090|ref|NP_001032734.1| ras-related protein Rab-2B [Rattus norvegicus]
gi|77567746|gb|AAI07444.1| RAB2B, member RAS oncogene family [Rattus norvegicus]
gi|149033676|gb|EDL88474.1| rCG61209, isoform CRA_a [Rattus norvegicus]
gi|149033677|gb|EDL88475.1| rCG61209, isoform CRA_a [Rattus norvegicus]
Length = 215
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 95/207 (45%), Positives = 133/207 (64%), Gaps = 12/207 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ + A E+ +++G
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAYINTA---KEIHRKIQQG 174
Query: 187 SNVVKR--NILKQKPENQSPPIGGCCS 211
V N +K P+ +G C S
Sbjct: 175 LFDVHNEANGIKIGPQQSISLVGPCPS 201
>gi|240849285|ref|NP_001155334.1| ras-related protein Rab-1A [Ovis aries]
gi|238566736|gb|ACR46625.1| RAB1A [Ovis aries]
Length = 204
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 172
>gi|431898744|gb|ELK07121.1| Ras-related protein Rab-2B [Pteropus alecto]
Length = 216
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 94/207 (45%), Positives = 129/207 (62%), Gaps = 11/207 (5%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD K+LLIGDSGVGKS LL+ F S TIG+DFKI+ + + GKR+KL IWDT
Sbjct: 12 YDYLIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDT 71
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+T++YYRGA GI+LVYDVT +F N+ + W + ++ ++++ + K+LVGNK
Sbjct: 72 AGQERFRTITTAYYRGAMGILLVYDVTDESSFNNIKN-WIRNIEQHASD-NVNKILVGNK 129
Query: 130 VDRD-SERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
D D S+R V +G ALA E+G F E SAKT NV++ F +A I + L E S
Sbjct: 130 ADMDESKRAVPTSKGQALADEYGIKFFETSAKTNMNVDEVFFSIARDIKQ--RLAESDSK 187
Query: 189 VVKRNILKQKPEN-----QSPPIGGCC 210
+ + +P+ Q+ CC
Sbjct: 188 TEPQTLKINQPDQGAGSAQASQTSSCC 214
>gi|300798691|ref|NP_001179594.1| ras-related protein Rab-2B [Bos taurus]
gi|426232812|ref|XP_004010414.1| PREDICTED: ras-related protein Rab-2B isoform 1 [Ovis aries]
gi|296483460|tpg|DAA25575.1| TPA: RAB2B protein-like [Bos taurus]
gi|440902097|gb|ELR52940.1| Ras-related protein Rab-2B [Bos grunniens mutus]
Length = 216
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/197 (49%), Positives = 122/197 (61%), Gaps = 19/197 (9%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIG+SGVGKS LL+ + +S + + TIGVDFKIK + + + +KL IWDTA
Sbjct: 30 DYLFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTA 89
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRTLTSSYYRGA GII+VYDVT R++F N+ W E++ ++ N K+LVGNK
Sbjct: 90 GQERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQ-WMHEIERFA-NAGVCKILVGNKC 147
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D + R VS EEG+ LAK + FLE SAK NVE F + SN +
Sbjct: 148 DMEESRKVSHEEGMELAKHYEIPFLETSAKNSINVETSFITM--------------SNEI 193
Query: 191 KRNILKQKPENQSPPIG 207
KRNI Q N G
Sbjct: 194 KRNI--QNKANTGTTTG 208
>gi|255722273|ref|XP_002546071.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
gi|240136560|gb|EER36113.1| GTP-binding protein SAS1 [Candida tropicalis MYA-3404]
Length = 211
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 89/182 (48%), Positives = 120/182 (65%), Gaps = 9/182 (4%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLT 56
M S +YD+ K+LL+GDSGVGKS LL+ F+ D +P TIG+DFKI+ +
Sbjct: 1 MSGKGTSSRAYDMIMKLLLVGDSGVGKSCLLLRFVE---DKFNPSFITTIGIDFKIRTIE 57
Query: 57 VAGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYS 116
GKR+KL +WDTAGQERFRT+T++YYRGA GI+L+YDVT +F N+ + W + V ++
Sbjct: 58 SKGKRIKLQVWDTAGQERFRTITTAYYRGAMGIVLIYDVTDSRSFENVEN-WFQTVTQHA 116
Query: 117 TNQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
N+D LVGNK D + R VS+E+G LA + FLE SAK+ ENV+ F +LA I
Sbjct: 117 -NEDAQIFLVGNKCDDEVNRQVSKEQGQELAAKLNIPFLEASAKSNENVDSIFYELAGII 175
Query: 177 ME 178
E
Sbjct: 176 QE 177
>gi|336270604|ref|XP_003350061.1| hypothetical protein SMAC_00950 [Sordaria macrospora k-hell]
gi|380095453|emb|CCC06926.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFANVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +R VS+E+G ALA E G FLE SAK N+E+ F LA I
Sbjct: 121 IGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDI 171
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 125/208 (60%), Gaps = 17/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GI +VYDVT ++F N+ W +E+D Y+T + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQ-WLQEIDRYAT-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VV + A G FLE SAK NVEQ F +A +I E GS++
Sbjct: 123 SDMADKKVVDYQVAKEFADSLGIPFLETSAKNASNVEQAFLTMARQIKE-----RMGSSI 177
Query: 190 VKRNILKQKPENQSP-------PIGGCC 210
N + N SP GGCC
Sbjct: 178 ATNNT--KANVNVSPGQGVSNNQSGGCC 203
>gi|149062039|gb|EDM12462.1| rCG48149, isoform CRA_d [Rattus norvegicus]
Length = 193
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 88/167 (52%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEI 169
>gi|52353602|gb|AAU44168.1| putative rab1 small GTP-binding protein [Oryza sativa Japonica
Group]
Length = 205
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/159 (56%), Positives = 109/159 (68%), Gaps = 3/159 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D FK+LLIGDS VGKS LL+ F S +D TIGVDFKI+ + + GK +KL IWDTA
Sbjct: 5 DYLFKLLLIGDSSVGKSCLLLRFADDSYIDTYISTIGVDFKIRTIELDGKTVKLQIWDTA 64
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ C K+LVGNK
Sbjct: 65 GQERFRTITSSYYRGAHGIIIVYDVTDMESFNNVKQ-WLSEIDRYASDSVC-KLLVGNKC 122
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF 169
D +VV EE A A+ G FLE SAK NVE+ F
Sbjct: 123 DLVDSKVVDTEEAKAFAESLGISFLETSAKESINVEEAF 161
>gi|340055116|emb|CCC49427.1| putative small GTP-binding protein Rab1 [Trypanosoma vivax Y486]
Length = 208
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 98/211 (46%), Positives = 129/211 (61%), Gaps = 12/211 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
S+ YD FK+LLIGDSGVGKS LL+ F S + TIGVDFKI+ L + GK +KL I
Sbjct: 2 SSEYDHLFKLLLIGDSGVGKSCLLLRFADDSYTESYISTIGVDFKIRTLNLEGKVIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D +++ ++ K+LV
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDATDMESFNNVK-TWLSEIDKFAS-ENVNKLLV 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +++ V + A G FLE SAK NVE+ F ++A I + + +G
Sbjct: 120 GNKCDLVTKKAVDTQMAKEFADSLGIPFLETSAKEASNVEEAFVRMATDIKK--RVAAQG 177
Query: 187 SNV-----VKRNILK--QKPENQSPPIGGCC 210
+N + +L KP S GGCC
Sbjct: 178 ANSGSGGPNSKPLLSGGNKPAGASGNKGGCC 208
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 86/160 (53%), Positives = 112/160 (70%), Gaps = 3/160 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSV-DDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKILLIGDSGVGKS LL+ F+ S + TIGVDFKIK + V GK +KL IWDT
Sbjct: 13 YDYLFKILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKIKTMRVDGKVVKLQIWDT 72
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA G+++VYD+T+RE++ NL W EV+ Y++ + +LVGNK
Sbjct: 73 AGQERFRTITSSYYRGAHGVMIVYDITKRESYNNLHK-WLMEVETYAS-EGVHMILVGNK 130
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCF 169
+D D++R V + A H F+E SAK +NV++ F
Sbjct: 131 IDLDTDREVQPDAAQEWAALHDMPFVETSAKGAKNVKEAF 170
>gi|336367724|gb|EGN96068.1| hypothetical protein SERLA73DRAFT_141217 [Serpula lacrymans var.
lacrymans S7.3]
gi|336380437|gb|EGO21590.1| hypothetical protein SERLADRAFT_396608 [Serpula lacrymans var.
lacrymans S7.9]
Length = 204
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 90/173 (52%), Positives = 116/173 (67%), Gaps = 3/173 (1%)
Query: 7 QSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLT 65
++ YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL
Sbjct: 2 HTSEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQ 61
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+L
Sbjct: 62 IWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLL 119
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
VGNK D S++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 120 VGNKSDLTSKKVVEYSVAKEFADQLSIPFLETSAKNATNVEQAFLTMAKQIKD 172
>gi|256084269|ref|XP_002578353.1| rab-2414 [Schistosoma mansoni]
gi|360045234|emb|CCD82782.1| putative rab-2,4,14 [Schistosoma mansoni]
Length = 213
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 131/205 (63%), Gaps = 14/205 (6%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMINIDDKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETFT+L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFTHLT-TWLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE F A I ++EG
Sbjct: 118 GNKSDLESRRDVQKEEGEAFAREHGLIFMETSAKTAANVEDAFIDTAKCI---HGKIQEG 174
Query: 187 SNVVKR--NILKQKPENQSPPIGGC 209
V N +K P + P+GG
Sbjct: 175 VLDVNNEANGIKLGPHHN--PVGGA 197
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 96/204 (47%), Positives = 130/204 (63%), Gaps = 10/204 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T +E+F N+ W +E++ Y+ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQ-WLEEIERYAC-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI---MEVPSLLEEG 186
D +++VV A + G FLE SAK+ NVEQ F +A +I + PS +
Sbjct: 126 SDLTTKKVVDHTTAAEYAAQLGIPFLETSAKSATNVEQAFMTMAAEIKNRVGPPSSATDN 185
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
++ VK I + +P + GCC
Sbjct: 186 ASKVK--IDQGRPVENTK--SGCC 205
>gi|348584804|ref|XP_003478162.1| PREDICTED: ras-related protein Rab-26-like [Cavia porcellus]
Length = 251
Score = 166 bits (419), Expect = 7e-39, Method: Compositional matrix adjust.
Identities = 84/178 (47%), Positives = 120/178 (67%), Gaps = 4/178 (2%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS--VDDLSPTIGVDFKIKLLTVAGK 60
S G + YD++FK++L+GDSGVGK+ LLV F + T+G+DF+ K+L V G
Sbjct: 47 SLGGGGDFYDIAFKVMLVGDSGVGKTCLLVRFKDGAFLAGTFISTVGIDFRNKVLDVDGM 106
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
++KL IWDTAGQERFR++T +YYR A ++L+YDVT + +F N+ W E+ Y+ + D
Sbjct: 107 KVKLQIWDTAGQERFRSVTHAYYRDAHALLLLYDVTNKASFDNIQ-AWLTEIQEYAQD-D 164
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
V ML+GNKVD ERVV RE+G LAKE+G ++E SAKT N+E F +A ++ +
Sbjct: 165 VVLMLLGNKVDSAQERVVKREDGEKLAKEYGLPYMETSAKTGINIELAFTAIAKELKQ 222
>gi|348577589|ref|XP_003474566.1| PREDICTED: ras-related protein Rab-2B-like isoform 2 [Cavia
porcellus]
Length = 216
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|71019499|ref|XP_759980.1| GTP-binding protein Ypt1 [Ustilago maydis 521]
gi|46099486|gb|EAK84719.1| YPT1_NEUCR GTP-binding protein ypt1 [Ustilago maydis 521]
Length = 208
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 99/211 (46%), Positives = 129/211 (61%), Gaps = 9/211 (4%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
+G S YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 AGLSADYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +TF+N+ W +E+D Y+ + K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDNDTFSNVKQ-WLQEIDRYAC-EGVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A + FLE SAK+ NVEQ F +A +I +
Sbjct: 120 LLVGNKSDLTNKKVVEYATAKDFADQLQIPFLETSAKSATNVEQAFLTMAKQIKDRMGSS 179
Query: 184 EEGSNVVKRNILK----QKPENQSPPIGGCC 210
+ ++ LK Q QS GGCC
Sbjct: 180 TVNNQAGGKSTLKVGQGQNVSQQSN--GGCC 208
>gi|7498104|pir||T33855 hypothetical protein D1037.4 - Caenorhabditis elegans
Length = 224
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/170 (48%), Positives = 119/170 (70%), Gaps = 3/170 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F S ++ TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GIILVYD+T +F N+ + W + ++ ++ + D +M++
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIILVYDITNERSFENIKN-WIRNIEEHAAS-DVERMII 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D + R VSR+ G LA E+G+ FLE SAK N+++ F LA I
Sbjct: 120 GNKCDIEERREVSRDRGEQLAIEYGTKFLETSAKANLNIDEAFFTLARDI 169
>gi|367007798|ref|XP_003688628.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
gi|357526938|emb|CCE66194.1| hypothetical protein TPHA_0P00360 [Tetrapisispora phaffii CBS 4417]
Length = 214
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/181 (51%), Positives = 124/181 (68%), Gaps = 12/181 (6%)
Query: 2 GSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTV 57
GS++G++ YD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 GSTNGKN--YDSIMKILLIGDSGVGKSCLLVRFVD---DKFNPSFITTIGIDFKIKTVEI 63
Query: 58 AGKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYST 117
G+++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT +TF N+ W K V ++
Sbjct: 64 NGRKIKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDEKTFANIRQ-WFKTVTEHA- 121
Query: 118 NQDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
N D +LVGNK D ++ R V+ E+G L++E G F+E SAK +NV + F LA I
Sbjct: 122 NDDAQLLLVGNKSDMET-RTVTHEQGDELSRELGIPFVEASAKNDDNVNEIFFTLAKLIQ 180
Query: 178 E 178
E
Sbjct: 181 E 181
>gi|116734835|ref|NP_001068822.1| ras-related protein Rab-2A [Bos taurus]
gi|109939903|gb|AAI18272.1| RAB2A, member RAS oncogene family [Bos taurus]
gi|296480621|tpg|DAA22736.1| TPA: RAB2A, member RAS oncogene family [Bos taurus]
Length = 189
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 85/162 (52%), Positives = 115/162 (70%), Gaps = 7/162 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQC 168
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEA 159
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 83/171 (48%), Positives = 117/171 (68%), Gaps = 3/171 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ L+V F S + TIG+DFKI+ + GK++KL +
Sbjct: 2 AKAYDHLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQV 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERF+T+T++YYRGA GIILVYD+T ++ N+ + W K + + +ML+
Sbjct: 62 WDTAGQERFKTITTAYYRGAMGIILVYDITDERSYENIQN-WMKSIK-ENAAAGVERMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM 177
GNK D +++R V +E G LAKEHG F E SAK+ +NV++ F LA I+
Sbjct: 120 GNKCDMENKRKVPKERGEKLAKEHGIRFFETSAKSSQNVDEAFNTLARDIL 170
>gi|339237905|ref|XP_003380507.1| GTP-binding protein YPTC1 [Trichinella spiralis]
gi|316976620|gb|EFV59875.1| GTP-binding protein YPTC1 [Trichinella spiralis]
Length = 200
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/168 (52%), Positives = 115/168 (68%), Gaps = 3/168 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWD 68
S+D FK+LLIGDSGVGKS LL+ F + D TIGVDFKI+ + + GK +KL IWD
Sbjct: 2 SFDYLFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIDLDGKTIKLQIWD 61
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERFRT+TSSYYRGA GII+VYD++ +E+F N+ W E++ Y+ ++ K+LVGN
Sbjct: 62 TAGQERFRTITSSYYRGAHGIIVVYDISDQESFNNVKQ-WLLEIERYAC-ENVNKLLVGN 119
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
K DR +ER V + A + G FLE SAK NVEQ F +A +I
Sbjct: 120 KSDRTAERAVEYDTAKEYADQLGIPFLETSAKNSTNVEQAFLTMAGEI 167
>gi|134105123|pdb|2OCY|C Chain C, Complex Of The Guanine Exchange Factor Sec2p And The Rab
Gtpase Sec4p
Length = 170
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 93/167 (55%), Positives = 118/167 (70%), Gaps = 10/167 (5%)
Query: 16 KILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTIWDTAG 71
KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + GK++KL +WDTAG
Sbjct: 5 KILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 61
Query: 72 QERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVD 131
QERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N + +LVGNK D
Sbjct: 62 QERFRTITTAYYRGAXGIILVYDVTDERTFTNIKQ-WFKTVNEHA-NDEAQLLLVGNKSD 119
Query: 132 RDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 120 XET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 165
>gi|395861634|ref|XP_003803086.1| PREDICTED: ras-related protein Rab-2B [Otolemur garnettii]
Length = 216
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|311261052|ref|XP_003128612.1| PREDICTED: ras-related protein Rab-2B-like isoform 1 [Sus scrofa]
Length = 216
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/170 (51%), Positives = 119/170 (70%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++ + GK++KL I
Sbjct: 2 TYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVNIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ +S++ + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLTS-WLEDARQHSSS-NMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D +S R V REEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLESRRDVKREEGEAFAREHGLIFMETSAKTACNVEEAFINTAKEI 167
>gi|154339774|ref|XP_001565844.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|134063162|emb|CAM45362.1| putative small GTP-binding protein Rab1 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 200
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/205 (47%), Positives = 123/205 (60%), Gaps = 14/205 (6%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S D TIGVDFKI+ L + K +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYTDSYISTIGVDFKIRTLNLDSKVIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDTTDMESFNNVK-TWLSEIDKYAS-ENVNKILVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++ V + A G FLE SAK NVE+ F Q+A I ++ E +V
Sbjct: 123 CDLVTKKAVDTQMAKDFADSLGIPFLETSAKNSTNVEEAFIQMASGIKTRLAVSGETKSV 182
Query: 190 VKRNILKQKPENQSPPI----GGCC 210
+P Q+PP CC
Sbjct: 183 -------SRPNLQNPPAPKKEDNCC 200
>gi|393911454|gb|EFO26789.2| Ras-like protein Rab-2 [Loa loa]
Length = 212
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 118/170 (69%), Gaps = 7/170 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SY FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ K++KL I
Sbjct: 2 SYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDSKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLAS-WLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
GNK D ++ R V +EEG A A+EHG +F+E SAKT NVE+ F A +I
Sbjct: 118 GNKSDLEARREVKKEEGEAFAREHGLIFMETSAKTAANVEEAFIDTAKEI 167
>gi|388855844|emb|CCF50628.1| probable SEC4-like Rab/GTPase [Ustilago hordei]
Length = 208
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 91/210 (43%), Positives = 134/210 (63%), Gaps = 16/210 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLTI 66
YD K+LLIGDSGVGKS LL+ F D +P TIG+DFKI+ + + GKR+KL I
Sbjct: 6 YDFLIKLLLIGDSGVGKSCLLLRFCD---DAWTPSFITTIGIDFKIRTIELDGKRIKLQI 62
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LV+DVT +++F N+ W ++ +++ + K+L+
Sbjct: 63 WDTAGQERFRTITTAYYRGAMGILLVFDVTDQKSFENVR-TWHANIEQHAS-EGVSKILI 120
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLA----LKIMEVPSL 182
GNK D + +R V+ E+G LAKE G ++E SAK+ NVE+ F LA ++++ ++
Sbjct: 121 GNKSDWEEKRAVTTEQGEELAKELGIPYIETSAKSNSNVEEAFFNLAREVKTRLIDTAAV 180
Query: 183 LEEGSNVVKRNI-LKQKPENQSPPIGGCCS 211
+ N+ + P+ GGCCS
Sbjct: 181 TQASPAAASANVNVNSAPKTGGA--GGCCS 208
>gi|403072070|pdb|4FMC|B Chain B, Espg-Rab1 Complex
gi|403072072|pdb|4FMC|D Chain D, Espg-Rab1 Complex
gi|403072076|pdb|4FMD|B Chain B, Espg-Rab1 Complex Structure At 3.05 A
gi|403072078|pdb|4FMD|D Chain D, Espg-Rab1 Complex Structure At 3.05 A
gi|403072082|pdb|4FME|B Chain B, Espg-Rab1-Arf6 Complex
gi|403072085|pdb|4FME|E Chain E, Espg-Rab1-Arf6 Complex
Length = 171
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 89/167 (53%), Positives = 114/167 (68%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 3 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 62
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 63 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 120
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +++VV A G FLE SAK NVEQ F +A +I
Sbjct: 121 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEI 167
>gi|302692268|ref|XP_003035813.1| small GTP-binding protein [Schizophyllum commune H4-8]
gi|300109509|gb|EFJ00911.1| small GTP-binding protein [Schizophyllum commune H4-8]
Length = 203
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 94/201 (46%), Positives = 120/201 (59%), Gaps = 3/201 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +TFTN+ W +E+D Y++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDNDTFTNVKQ-WLQEIDRYAS-EGVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++VV A + FLE SAK NVEQ F +A +I +
Sbjct: 123 SDLTGKKVVEYTVAKEFADQLAIPFLETSAKNATNVEQAFLTMAKQIKDRMGSSSAAPGA 182
Query: 190 VKRNILKQKPENQSPPIGGCC 210
K + + GGCC
Sbjct: 183 GKSSTITPGQSVNQQQGGGCC 203
>gi|340726838|ref|XP_003401759.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
terrestris]
gi|350421632|ref|XP_003492906.1| PREDICTED: ras-related protein Rab-8A-like isoform 1 [Bombus
impatiens]
Length = 209
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 129/202 (63%), Gaps = 18/202 (8%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTI 66
+ +YD FK+LLIGDSGVGK+ +L F + + TIG+DFKI+ + + GK++KL I
Sbjct: 2 AKTYDYLFKLLLIGDSGVGKTCVLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ + + D KML+
Sbjct: 62 WDTAGQERFRTITTAYYRGAMGIMLVYDVTNEKSFENIKN-WIRNIE-ENASADVEKMLL 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK + +R VS+E G LA E+G F+E SAK+ NVE+ F LA I
Sbjct: 120 GNKCELTEKRQVSKERGEQLAVEYGIKFMETSAKSSINVEEAFYTLARDI---------- 169
Query: 187 SNVVKRNILKQKPENQSPPIGG 208
+ +++K E +PP GG
Sbjct: 170 -----KAKMEKKLEASNPPKGG 186
>gi|85106728|ref|XP_962242.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|28923842|gb|EAA33006.1| GTP-binding protein SAS1 [Neurospora crassa OR74A]
gi|336470991|gb|EGO59152.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2508]
gi|350292068|gb|EGZ73263.1| GTP-binding protein SAS1 [Neurospora tetrasperma FGSC 2509]
Length = 205
Score = 166 bits (419), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 90/171 (52%), Positives = 117/171 (68%), Gaps = 9/171 (5%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLKLT 65
+YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+KL
Sbjct: 6 NYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVKLQ 62
Query: 66 IWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKML 125
IWDTAGQERFRT+T++YYRGA GI+LVYDVT +F N+ W V+ ++T + K+L
Sbjct: 63 IWDTAGQERFRTITTAYYRGAMGILLVYDVTDERSFNNIR-TWFANVEQHAT-EGVNKIL 120
Query: 126 VGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
+GNK D + +R VS+E+G ALA E G FLE SAK N+E+ F LA I
Sbjct: 121 IGNKCDWEEKRAVSKEQGQALADELGIPFLEVSAKANINIEEAFFSLANDI 171
>gi|396491326|ref|XP_003843542.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
gi|312220121|emb|CBY00063.1| similar to GTP-binding protein [Leptosphaeria maculans JN3]
Length = 206
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 97/209 (46%), Positives = 132/209 (63%), Gaps = 12/209 (5%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGKRLK 63
S +YD K+LLIGDSGVGKS L+ F S D +P TIG+DFKI+ + + GKR+K
Sbjct: 4 SRNYDFLIKLLLIGDSGVGKSCCLLRF---SEDSFTPSFITTIGIDFKIRTIELDGKRVK 60
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+T++YYRGA GI+LVYDVT + +F N+ W V+ ++T + K
Sbjct: 61 LQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDQRSFENIR-TWFSNVEQHAT-EGVNK 118
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME--VPS 181
+L+GNK D + +R VS E+G ALA E G FLE SAK+ NV++ F LA I + + +
Sbjct: 119 ILIGNKCDWEEKRAVSTEQGQALADELGIPFLEVSAKSNINVDKAFYSLASDIKKRLIDT 178
Query: 182 LLEEGSNVVKRNILKQKPENQSPPIGGCC 210
+ K ++ Q +N G CC
Sbjct: 179 ARTDQPQAAKVDVGGQGGDNAGMG-GKCC 206
>gi|83595175|gb|ABC25044.1| RAS related GTP-binding protein RAB10 [Hydra vulgaris]
Length = 203
Score = 165 bits (418), Expect = 8e-39, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 129/203 (63%), Gaps = 6/203 (2%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YD FK+LLIGDSGVGK+ LL F + + TIG+DFKIK + V GK++KL IWD
Sbjct: 5 AYDYLFKLLLIGDSGVGKTCLLFRFSDDAFNTTFISTIGIDFKIKTVEVDGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T+ +TF N++ W + +D +++ + +M++GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITQEKTFDNIAK-WLRNIDEHAS-EGVERMILGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +R+ S+E+G +A+EH F E SAK VE+ F +L I+
Sbjct: 123 KCDMNDKRMASKEKGEGIAREHNIKFYETSAKDNICVEEAFMRLTQDILRKHQAGATQDQ 182
Query: 189 VVKRNILKQKPENQSPPIGGCCS 211
++ + EN++ P CCS
Sbjct: 183 ATTGVVIPK--ENRAKP-ANCCS 202
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,029,316,960
Number of Sequences: 23463169
Number of extensions: 113911975
Number of successful extensions: 596459
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 19639
Number of HSP's successfully gapped in prelim test: 6800
Number of HSP's that attempted gapping in prelim test: 540521
Number of HSP's gapped (non-prelim): 27618
length of query: 211
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 75
effective length of database: 9,168,204,383
effective search space: 687615328725
effective search space used: 687615328725
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 73 (32.7 bits)