BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028300
(211 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O49841|RAC2A_ARATH Ras-related protein RABC2a OS=Arabidopsis thaliana GN=RABC2A PE=1
SV=1
Length = 210
Score = 369 bits (947), Expect = e-102, Method: Compositional matrix adjust.
Identities = 182/211 (86%), Positives = 196/211 (92%), Gaps = 1/211 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS YDLSFKILLIGDSGVGKSSLLVSFISSSV+DL+PTIGVDFKIK LTV GK
Sbjct: 1 MGSSSGQSG-YDLSFKILLIGDSGVGKSSLLVSFISSSVEDLAPTIGVDFKIKQLTVGGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNL DVW KE++LYSTNQ+
Sbjct: 60 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLVDVWGKEIELYSTNQE 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
CV+MLVGNKVDR+SER VSREEGIALAKE +FLECSA+TR+NVEQCFE+LALKIMEVP
Sbjct: 120 CVRMLVGNKVDRESERGVSREEGIALAKELNCMFLECSARTRQNVEQCFEELALKIMEVP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS+ VKRNILKQKPE+Q+ GCCS
Sbjct: 180 SLLEEGSSAVKRNILKQKPEHQTNTQSGCCS 210
>sp|O23657|RABC1_ARATH Ras-related protein RABC1 OS=Arabidopsis thaliana GN=RABC1 PE=2
SV=1
Length = 212
Score = 318 bits (815), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 152/199 (76%), Positives = 175/199 (87%), Gaps = 1/199 (0%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQ +D FK+LLIGDSGVGKSSLL+SF S++ DDLSPTIGVDFK+K LT+ K
Sbjct: 1 MGSSSGQPE-FDYLFKVLLIGDSGVGKSSLLLSFTSNTFDDLSPTIGVDFKVKYLTIGEK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
+LKL IWDTAGQERFRTLTSSYYRGAQGII+VYDVTRR+TFTNLSD+WAKE+DLYSTNQD
Sbjct: 60 KLKLAIWDTAGQERFRTLTSSYYRGAQGIIMVYDVTRRDTFTNLSDIWAKEIDLYSTNQD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVD++SER VS++EGI A+E+G LFLECSAKTR NVEQCFE+L LKI+E P
Sbjct: 120 CIKMLVGNKVDKESERAVSKKEGIDFAREYGCLFLECSAKTRVNVEQCFEELVLKILETP 179
Query: 181 SLLEEGSNVVKRNILKQKP 199
SL EGS+ K+NI KQ P
Sbjct: 180 SLTAEGSSGGKKNIFKQNP 198
>sp|Q9SF92|RAC2B_ARATH Ras-related protein RABC2b OS=Arabidopsis thaliana GN=RABC2B PE=2
SV=1
Length = 205
Score = 305 bits (781), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 164/211 (77%), Positives = 186/211 (88%), Gaps = 7/211 (3%)
Query: 1 MGSSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSPTIGVDFKIKLLTVAGK 60
MGSSSGQS YDLSFKILLIGDSGVGKSSLL+SFISSSV+DL+PTIGVDFKIK + V GK
Sbjct: 1 MGSSSGQSG-YDLSFKILLIGDSGVGKSSLLLSFISSSVEDLAPTIGVDFKIKQMKVRGK 59
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
RLKLTIWDTAGQE+FRTLTSSY+RG+QGIILVYDVT+RETF NL+D+WAKE++LYSTN D
Sbjct: 60 RLKLTIWDTAGQEKFRTLTSSYFRGSQGIILVYDVTKRETFLNLADIWAKEIELYSTNHD 119
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVP 180
C+KMLVGNKVDR+SER VSREEG+ALAK+ LF ECSA+TRENV CFE+LALKIMEVP
Sbjct: 120 CIKMLVGNKVDRESERKVSREEGMALAKDLNCLFHECSARTRENVNGCFEELALKIMEVP 179
Query: 181 SLLEEGSNVVKRNILKQKPENQSPPIGGCCS 211
SLLEEGS+ VKR KP+ ++ G CCS
Sbjct: 180 SLLEEGSSSVKR-----KPDYRAHQ-GRCCS 204
>sp|P36862|YPTV3_VOLCA GTP-binding protein yptV3 OS=Volvox carteri GN=YPTV3 PE=3 SV=1
Length = 203
Score = 218 bits (556), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 112/202 (55%), Positives = 139/202 (68%), Gaps = 3/202 (1%)
Query: 9 NSYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIW 67
+S+D +FK+LL+GDSGVGKS +L F S ++ + TIGVDFK+K LT GKR KLTIW
Sbjct: 4 DSHDYTFKVLLVGDSGVGKSCILTRFTSGIFEESTTSTIGVDFKVKYLTADGKRCKLTIW 63
Query: 68 DTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVG 127
DTAGQERFRTLTSSYYRGAQGII VYDVTRR+TF +L W +E D+YST + +KM+V
Sbjct: 64 DTAGQERFRTLTSSYYRGAQGIIFVYDVTRRDTFESLEANWMREFDIYSTVESAIKMVVA 123
Query: 128 NKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
NKVD ++R VS EEG A+ HG LF+E SA+ V Q FE+L LKI++ P LLE +
Sbjct: 124 NKVDLSAQRQVSSEEGHDFARRHGCLFVETSARANLAVGQAFEELLLKILDTPLLLE--T 181
Query: 188 NVVKRNILKQKPENQSPPIGGC 209
V L P Q + C
Sbjct: 182 TAVGGIKLGAVPTGQQAGVCSC 203
>sp|Q6DHC1|RB18B_DANRE Ras-related protein Rab-18-B OS=Danio rerio GN=rab18b PE=2 SV=1
Length = 205
Score = 210 bits (534), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 108/199 (54%), Positives = 139/199 (69%), Gaps = 4/199 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K + + G R KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTIAIDGNRAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVT+R+TFT L + W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTKRDTFTKLEN-WLNELETYCTRNDLVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
D+ R V R EG+ A++H LF+E SAKTR+ V+ FE+L KI++ P L E
Sbjct: 127 DN-REVDRNEGLKFARKHSMLFIEASAKTRDGVQCAFEELVEKILQTPGLWESSIQNHGV 185
Query: 193 NILKQKPENQSPPIGGCCS 211
+ +P+ Q GG CS
Sbjct: 186 QLSDNEPQRQG-ACGGYCS 203
>sp|Q5ZLG1|RAB18_CHICK Ras-related protein Rab-18 OS=Gallus gallus GN=RAB18 PE=2 SV=1
Length = 206
Score = 201 bits (510), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 102/175 (58%), Positives = 130/175 (74%), Gaps = 3/175 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D VKMLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVKMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGS 187
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESES 180
>sp|Q5EB77|RAB18_RAT Ras-related protein Rab-18 OS=Rattus norvegicus GN=Rab18 PE=2 SV=1
Length = 206
Score = 200 bits (508), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 105/197 (53%), Positives = 137/197 (69%), Gaps = 6/197 (3%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E + +
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWESEN---QN 182
Query: 193 NILKQKPENQSPPIGGC 209
+K P +S G C
Sbjct: 183 KGVKLSPREESHGGGAC 199
>sp|P35293|RAB18_MOUSE Ras-related protein Rab-18 OS=Mus musculus GN=Rab18 PE=2 SV=2
Length = 206
Score = 200 bits (508), Expect = 7e-51, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 139/200 (69%), Gaps = 5/200 (2%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKR 192
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E N K
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWES-ENQNKG 184
Query: 193 NILKQKPENQ-SPPIGGCCS 211
L + E++ GG CS
Sbjct: 185 VKLSHREESRGGGACGGYCS 204
>sp|Q5R5H5|RAB18_PONAB Ras-related protein Rab-18 OS=Pongo abelii GN=RAB18 PE=2 SV=1
Length = 206
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|Q9NP72|RAB18_HUMAN Ras-related protein Rab-18 OS=Homo sapiens GN=RAB18 PE=1 SV=1
Length = 206
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|Q0IIG8|RAB18_BOVIN Ras-related protein Rab-18 OS=Bos taurus GN=RAB18 PE=2 SV=1
Length = 206
Score = 198 bits (504), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 100/172 (58%), Positives = 128/172 (74%), Gaps = 3/172 (1%)
Query: 14 SFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQ 72
+ KIL+IG+SGVGKSSLL+ F + D +L+ TIGVDFK+K ++V G + KL IWDTAGQ
Sbjct: 8 TLKILIIGESGVGKSSLLLRFTDDTFDPELAATIGVDFKVKTISVDGNKAKLAIWDTAGQ 67
Query: 73 ERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDR 132
ERFRTLT SYYRGAQG+ILVYDVTRR+TF L D W E++ Y T D V MLVGNK+D+
Sbjct: 68 ERFRTLTPSYYRGAQGVILVYDVTRRDTFVKL-DNWLNELETYCTRNDIVNMLVGNKIDK 126
Query: 133 DSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLE 184
++ R V R EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E
Sbjct: 127 EN-REVDRNEGLKFARKHSMLFIEASAKTCDGVQCAFEELVEKIIQTPGLWE 177
>sp|P90726|RAB18_CAEBR Ras-related protein Rab-18 OS=Caenorhabditis briggsae GN=rab-18
PE=3 SV=1
Length = 202
Score = 195 bits (496), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 103/206 (50%), Positives = 136/206 (66%), Gaps = 6/206 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLK 63
S S+S + KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ +T+ G R+K
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMTIDGNRVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT SYYRGAQG+I VYDVT R +F L W EVD Y TN + +K
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLKH-WMTEVDTYCTNDNVIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
M+V NK+D R V+REEG+ AK H +LF+E SAKT+E V+ FE+L KI++ P L
Sbjct: 121 MMVANKIDM-PNRTVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
Query: 184 EEGSNVVKRNILKQKPENQSPPIGGC 209
+ + L Q + S + GC
Sbjct: 180 DNDRPTFR---LGQPTDTSSGNLCGC 202
>sp|Q8MXS1|RAB18_CAEEL Ras-related protein Rab-18 OS=Caenorhabditis elegans GN=rab-18 PE=3
SV=1
Length = 203
Score = 195 bits (495), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 98/181 (54%), Positives = 130/181 (71%), Gaps = 3/181 (1%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLK 63
S S+S + KIL+IG+SGVGKSSL++ F+ D + + TIGVDF++ + + G R+K
Sbjct: 2 SDDSSSPLTTLKILIIGESGVGKSSLMLRFVDDVFDPEQAATIGVDFRVTSMAIDGNRVK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRTLT SYYRGAQG+I VYDVT R +F L+ W +EVD Y TN + +K
Sbjct: 62 LAIWDTAGQERFRTLTPSYYRGAQGVICVYDVTSRSSFEKLNH-WMQEVDTYCTNDNIIK 120
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
M+V NK+D RVV+REEG+ AK H +LF+E SAKT+E V+ FE+L KI++ P L
Sbjct: 121 MMVANKIDM-PNRVVTREEGLKFAKRHRTLFIEASAKTKEGVQCTFEELIEKIIQTPDLW 179
Query: 184 E 184
+
Sbjct: 180 D 180
>sp|Q05976|RB18A_LYMST Ras-related protein Rab-18A OS=Lymnaea stagnalis GN=RAB18A PE=2
SV=1
Length = 202
Score = 191 bits (484), Expect = 4e-48, Method: Compositional matrix adjust.
Identities = 97/183 (53%), Positives = 128/183 (69%), Gaps = 5/183 (2%)
Query: 21 GDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTAGQERFRTLT 79
G+SGVGKSSLL+ F + D + + TIGVDFK+K LTV G + KL IWDTAGQERFRTLT
Sbjct: 16 GESGVGKSSLLLRFTEDTFDPEQAATIGVDFKVKTLTVEGNKTKLAIWDTAGQERFRTLT 75
Query: 80 SSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKVDRDSERVVS 139
SYYRGAQG+ILVYDV+ +++F L D W E++ +ST D VKMLVGNK+DR + V+
Sbjct: 76 PSYYRGAQGVILVYDVSSKQSFNKL-DAWLNELETFSTKHDMVKMLVGNKIDRANHE-VT 133
Query: 140 REEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVVKRNILKQKP 199
++EG+ A++H LF+E SAKT + V+ FE+L KI++ P L E S + + P
Sbjct: 134 KDEGLKFARKHHMLFIEASAKTNDGVQCAFEELVEKIIQTPGLWETSSKNL--TLSNHGP 191
Query: 200 ENQ 202
E Q
Sbjct: 192 EGQ 194
>sp|Q54GY8|RAB18_DICDI Ras-related protein Rab-18 OS=Dictyostelium discoideum GN=rab18
PE=3 SV=1
Length = 202
Score = 190 bits (482), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 101/201 (50%), Positives = 138/201 (68%), Gaps = 4/201 (1%)
Query: 12 DLSFKILLIGDSGVGKSSLLVSFISSSVD-DLSPTIGVDFKIKLLTVAGKRLKLTIWDTA 70
D +K+LLIGDS VGK+S++ F + D DL TIGV+FK+K + V GK++ L IWDTA
Sbjct: 4 DKQYKVLLIGDSDVGKTSIVKRFSDDTFDEDLLCTIGVEFKMKEVKVDGKKVDLCIWDTA 63
Query: 71 GQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNKV 130
GQE+FR L SSYYRGA GIIL YDVT+RE+F NL + W EV+ ++ + VK+LVGNK+
Sbjct: 64 GQEKFRALISSYYRGAHGIILTYDVTKRESFDNL-NYWLNEVENFANRSNLVKLLVGNKI 122
Query: 131 DRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNVV 190
D+++ R V+REEG AK+ LF+ECSAK++ ++Q FE+LA KI+E+P S
Sbjct: 123 DKEN-REVTREEGAEFAKKKAMLFIECSAKSKIGIQQAFEELAQKIIEIPQNT-SSSQPK 180
Query: 191 KRNILKQKPENQSPPIGGCCS 211
+RN K E++ G CS
Sbjct: 181 QRNTGSVKVEDEPDHNQGVCS 201
>sp|Q05737|YPTM2_MAIZE GTP-binding protein YPTM2 OS=Zea mays GN=YPTM2 PE=2 SV=1
Length = 203
Score = 179 bits (453), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDQESFNNVKQ-WLNEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D + +VV+ E A A E G F+E SAK NV+Q F +A I + + +N
Sbjct: 123 SDLTANKVVATETAKAFADEMGIPFMETSAKNATNVQQAFMAMAASIKDRMASQPAAANA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P NQ CCS
Sbjct: 183 RPATVQIRGQPVNQKT---SCCS 202
>sp|Q9ZRE2|RABD1_ARATH Ras-related protein RABD1 OS=Arabidopsis thaliana GN=RABD1 PE=1
SV=1
Length = 205
Score = 177 bits (448), Expect = 5e-44, Method: Compositional matrix adjust.
Identities = 101/204 (49%), Positives = 125/204 (61%), Gaps = 3/204 (1%)
Query: 8 SNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SN YD FK+LLIGDS VGKS LL+ F + +D TIGVDFKI+ + GK +KL I
Sbjct: 2 SNEYDYLFKLLLIGDSSVGKSCLLLRFADDAYIDSYISTIGVDFKIRTIEQDGKTIKLQI 61
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQERFRT+TSSYYRGA GII+VYD T E+F N+ W E+D Y+ N+ K+L+
Sbjct: 62 WDTAGQERFRTITSSYYRGAHGIIIVYDCTEMESFNNVKQ-WLSEIDRYA-NESVCKLLI 119
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEG 186
GNK D +VVS E G ALA E G FLE SAK NVEQ F +A +I +
Sbjct: 120 GNKNDMVESKVVSTETGRALADELGIPFLETSAKDSINVEQAFLTIAGEIKKKMGSQTNA 179
Query: 187 SNVVKRNILKQKPENQSPPIGGCC 210
+ ++ K + GGCC
Sbjct: 180 NKTSGPGTVQMKGQPIQQNNGGCC 203
>sp|Q9SEH3|RAD2C_ARATH Ras-related protein RABD2c OS=Arabidopsis thaliana GN=RABD2C PE=1
SV=1
Length = 202
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 126/202 (62%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G +
Sbjct: 123 CDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGSK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVQIRGQPVNQQ---SGCCS 201
>sp|Q54NU2|RAB1D_DICDI Ras-related protein Rab-1D OS=Dictyostelium discoideum GN=rab1D
PE=1 SV=1
Length = 204
Score = 176 bits (447), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/167 (56%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDDLS-PTIGVDFKIKLLTVAGKRLKLTIWDT 69
+D FKILLIGDSGVGKS LL+ F S D TIGVDFKIK L + GK +KL IWDT
Sbjct: 7 HDFFFKILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDT 66
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGAQGIILVYD T +++FTN+ W E+D Y+ ++ K+LVGNK
Sbjct: 67 AGQERFRTITSSYYRGAQGIILVYDCTDQDSFTNVKQ-WMGEIDRYAC-ENVNKLLVGNK 124
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D +E+VV + + A+ +G F+E SAK NVE+CF +A I
Sbjct: 125 TDLVNEKVVDSNQAKSFAESYGIPFIETSAKNATNVEECFISMARDI 171
>sp|O42819|SEC4_CANGA Ras-related protein SEC4 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=SEC4 PE=3
SV=1
Length = 215
Score = 176 bits (447), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 100/179 (55%), Positives = 123/179 (68%), Gaps = 10/179 (5%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + + G
Sbjct: 10 SSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDING 66
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
K++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TF N+ W K V+ ++ N
Sbjct: 67 KKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFANIKQ-WFKTVNEHA-ND 124
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D D+ RVV+ E+G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 125 EAQLLLVGNKSDMDT-RVVTYEQGEALAKELGLPFIESSAKNDDNVNEIFFTLARLIQE 182
>sp|Q9FPJ4|RAD2B_ARATH Ras-related protein RABD2b OS=Arabidopsis thaliana GN=RABD2B PE=2
SV=1
Length = 202
Score = 176 bits (445), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 101/202 (50%), Positives = 125/202 (61%), Gaps = 6/202 (2%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S +D TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLDSYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+ YDVT E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVTYDVTDLESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D S++VVS E A A E G FLE SAK NVE+ F + I + G
Sbjct: 123 NDLTSQKVVSTETAKAFADELGIPFLETSAKNATNVEEAFMAMTAAIKTRMASQPAGGAK 182
Query: 190 VKRNILKQKPENQSPPIGGCCS 211
++ +P NQ GCCS
Sbjct: 183 PPTVQIRGQPVNQQ---SGCCS 201
>sp|P07560|SEC4_YEAST Ras-related protein SEC4 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=SEC4 PE=1 SV=1
Length = 215
Score = 176 bits (445), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 99/180 (55%), Positives = 125/180 (69%), Gaps = 10/180 (5%)
Query: 3 SSSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVA 58
+SSG SYD KILLIGDSGVGKS LLV F+ D +P TIG+DFKIK + +
Sbjct: 9 ASSGNGKSYDSIMKILLIGDSGVGKSCLLVRFVE---DKFNPSFITTIGIDFKIKTVDIN 65
Query: 59 GKRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTN 118
GK++KL +WDTAGQERFRT+T++YYRGA GIILVYDVT TFTN+ W K V+ ++ N
Sbjct: 66 GKKVKLQLWDTAGQERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQ-WFKTVNEHA-N 123
Query: 119 QDCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+ +LVGNK D ++ RVV+ ++G ALAKE G F+E SAK +NV + F LA I E
Sbjct: 124 DEAQLLLVGNKSDMET-RVVTADQGEALAKELGIPFIESSAKNDDNVNEIFFTLAKLIQE 182
>sp|P28188|RAD2A_ARATH Ras-related protein RABD2a OS=Arabidopsis thaliana GN=RABD2A PE=1
SV=3
Length = 203
Score = 175 bits (444), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 100/203 (49%), Positives = 126/203 (62%), Gaps = 7/203 (3%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S V+ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT E+F N+ W E+D Y+++ + K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQ-WLSEIDRYASD-NVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D R + E A A E G F+E SAK NVEQ F ++ I E + G+N
Sbjct: 123 SDLTENRAIPYETAKAFADEIGIPFMETSAKDATNVEQAFMAMSASIKERMASQPAGNNA 182
Query: 190 VKRNI-LKQKPENQSPPIGGCCS 211
+ ++ +P Q GCCS
Sbjct: 183 RPPTVQIRGQPVAQK---NGCCS 202
>sp|P40392|RIC1_ORYSJ Ras-related protein RIC1 OS=Oryza sativa subsp. japonica GN=RIC1
PE=2 SV=2
Length = 202
Score = 175 bits (443), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 96/167 (57%), Positives = 117/167 (70%), Gaps = 3/167 (1%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F S ++ TIGVDFKI+ + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDSYLESYISTIGVDFKIRTVEQDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLNEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKI 176
D RVVS E G ALA E G FLE SAK NVE+ F +A +I
Sbjct: 123 CDLAENRVVSYEAGKALADEIGIPFLETSAKDATNVEKAFMTMAGEI 169
>sp|Q38922|RAB1B_ARATH Ras-related protein RABB1b OS=Arabidopsis thaliana GN=RABB1B PE=2
SV=1
Length = 211
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 91/172 (52%), Positives = 121/172 (70%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
SYD FK ++IGD+GVGKS LL+ F V DL TIGV+F +++TV G+ +KL I
Sbjct: 2 SYDYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMVTVDGRPIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRRETF +L+ W ++ ++ N + ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRETFNHLAS-WLEDARQHA-NPNMSIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +R VS+EEG AKEHG LFLE SA+T +NVE+ F + A KI++
Sbjct: 118 GNKCDLAHKRAVSKEEGQQFAKEHGLLFLEASARTAQNVEEAFIETAAKILQ 169
>sp|Q9TVU5|RAB1_THEPA Ras-related protein Rab-1 OS=Theileria parva GN=rab1 PE=1 SV=1
Length = 220
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/197 (45%), Positives = 130/197 (65%), Gaps = 8/197 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FKI++IGDSG GKSSLL+ F ++ + TIGVDFKIK + + +KL IWDT
Sbjct: 4 YDYLFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDT 63
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TS+YYRGA GII VYDVT + +F ++++ W +++D Y+T+ C K+L+GNK
Sbjct: 64 AGQERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSNVC-KLLIGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLAL----KIMEVPSLLEE 185
+D RVVS +E +A+++ ++E SAKT NVE+ F +A K+ + PS
Sbjct: 123 IDLAESRVVSADEAKHVAEQNNMNYIEASAKTDSNVEKAFTTIAKALKDKVTQYPS--NA 180
Query: 186 GSNVVKRNILKQKPENQ 202
++ V N + P N+
Sbjct: 181 PASTVSLNTASKVPTNR 197
>sp|P41924|RYL1_YARLI Ras-like GTP-binding protein RYL1 OS=Yarrowia lipolytica (strain
CLIB 122 / E 150) GN=RYL1 PE=3 SV=1
Length = 203
Score = 174 bits (441), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 92/178 (51%), Positives = 123/178 (69%), Gaps = 9/178 (5%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAGK 60
S +YDL K+LLIGDSGVGKS LL+ F D +P TIG+DFKI+ + + +
Sbjct: 2 SHSQRTYDLLIKLLLIGDSGVGKSCLLLRFCE---DQFTPSFITTIGIDFKIRTIDIGNQ 58
Query: 61 RLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQD 120
R+KL +WDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + V Y+ N+
Sbjct: 59 RVKLQVWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFNNIEN-WYQNVQSYA-NEG 116
Query: 121 CVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
+LVGNK D D +RVVS E+G ALA + G FLE S+KT NVE+CF +A +I +
Sbjct: 117 VELILVGNKCDLDEKRVVSTEQGQALADKFGIPFLEASSKTNINVEECFYSVATRIRD 174
>sp|Q01890|YPT1_PHYIN Ras-like GTP-binding protein YPT1 OS=Phytophthora infestans GN=YPT1
PE=3 SV=1
Length = 201
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 129/203 (63%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W E+D Y+ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLHEIDRYAC-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D ++RVVS + A+ G FLE SAK NVE+ F +A +I + + + V
Sbjct: 123 SDLTAKRVVSTDAAKEFAESLGIEFLETSAKNAANVEKAFMMMAAQIKKRMA----NAPV 178
Query: 190 VKRNILKQKPENQSPPIGG--CC 210
+ +K P Q P GG CC
Sbjct: 179 APKAGVKLTPGQQVPSNGGSKCC 201
>sp|P24409|RAB10_CANFA Ras-related protein Rab-10 OS=Canis familiaris GN=RAB10 PE=1 SV=1
Length = 200
Score = 174 bits (440), Expect = 4e-43, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKVNINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>sp|P61026|RAB10_HUMAN Ras-related protein Rab-10 OS=Homo sapiens GN=RAB10 PE=1 SV=1
Length = 200
Score = 174 bits (440), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 124/182 (68%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNGKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D D +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMDDKRVVPKGKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
>sp|P22125|RAB1_DIPOM Ras-related protein ORAB-1 OS=Diplobatis ommata PE=2 SV=1
Length = 202
Score = 173 bits (439), Expect = 8e-43, Method: Compositional matrix adjust.
Identities = 101/207 (48%), Positives = 128/207 (61%), Gaps = 16/207 (7%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P GS
Sbjct: 123 CDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGATSGGS 182
Query: 188 NVVKRNILKQKPENQSPPI----GGCC 210
NI QS P+ GGCC
Sbjct: 183 EKSNVNI-------QSTPVKSSGGGCC 202
>sp|Q6NYB7|RAB1A_RAT Ras-related protein Rab-1A OS=Rattus norvegicus GN=Rab1A PE=1 SV=3
Length = 205
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>sp|P62821|RAB1A_MOUSE Ras-related protein Rab-1A OS=Mus musculus GN=Rab1A PE=1 SV=3
Length = 205
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>sp|P62820|RAB1A_HUMAN Ras-related protein Rab-1A OS=Homo sapiens GN=RAB1A PE=1 SV=3
Length = 205
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>sp|P62822|RAB1A_CANFA Ras-related protein Rab-1A OS=Canis familiaris GN=RAB1A PE=1 SV=3
Length = 205
Score = 172 bits (437), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 129/208 (62%), Gaps = 6/208 (2%)
Query: 5 SGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLK 63
S + YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +K
Sbjct: 2 SSMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 64 LTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVK 123
L IWDTAGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNK 119
Query: 124 MLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLL 183
+LVGNK D +++VV A G FLE SAK NVEQ F +A +I +
Sbjct: 120 LLVGNKCDLTTKKVVDYTTAKEFADSLGIPFLETSAKNATNVEQSFMTMAAEIKKRMGPG 179
Query: 184 EEGSNVVKRNI-LKQKPENQSPPIGGCC 210
K N+ ++ P QS GGCC
Sbjct: 180 ATAGGAEKSNVKIQSTPVKQSG--GGCC 205
>sp|P20790|RAB8A_DICDI Ras-related protein Rab-8A OS=Dictyostelium discoideum GN=rab8A
PE=3 SV=1
Length = 208
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/202 (47%), Positives = 132/202 (65%), Gaps = 17/202 (8%)
Query: 4 SSGQSNSYDLSFKILLIGDSGVGKSSLLVSFISSSVDDLSP----TIGVDFKIKLLTVAG 59
++ +S +YD K+LLIGDSGVGKS LL+ F S D +P TIG+DFKI+ + + G
Sbjct: 5 ATNKSAAYDYLIKLLLIGDSGVGKSCLLLRF---SEDSFTPSFITTIGIDFKIRTIELEG 61
Query: 60 KRLKLTIWDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQ 119
KR+KL IWDTAGQERFRT+T++YYRGA GI+LVYDVT ++F N+ + W + ++ ++T+
Sbjct: 62 KRIKLQIWDTAGQERFRTITTAYYRGAMGILLVYDVTDEKSFGNIRN-WIRNIEQHATDS 120
Query: 120 DCVKMLVGNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIM-- 177
KML+GNK D ++VV G +LA E+G FLE SAK NVE+ F LA I
Sbjct: 121 -VNKMLIGNKCDMAEKKVVDSSRGKSLADEYGIKFLETSAKNSINVEEAFISLAKDIKKR 179
Query: 178 ------EVPSLLEEGSNVVKRN 193
E P +++ G+N+ N
Sbjct: 180 MIDTPNEQPQVVQPGTNLGANN 201
>sp|Q4R8X3|RAB1B_MACFA Ras-related protein Rab-1B OS=Macaca fascicularis GN=RAB1B PE=2
SV=1
Length = 201
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 99/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT RE++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGIPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPAGGGCC 201
>sp|Q05974|RAB1A_LYMST Ras-related protein Rab-1A OS=Lymnaea stagnalis GN=RAB1A PE=2 SV=1
Length = 205
Score = 171 bits (434), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 128/208 (61%), Gaps = 18/208 (8%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 8 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 67
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E+F N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 68 AGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQ-WLQEIDRYAS-ENVNKLLVGNK 125
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSNV 189
D +++VV A + G FLE SAK NVEQ F +A +I + S+
Sbjct: 126 SDLTTKKVVDFTTAKEYADQLGIPFLETSAKNATNVEQAFMTMAAEIKNRMGPITAASD- 184
Query: 190 VKRNILKQKPE---NQSPPI----GGCC 210
KP N S P+ GGCC
Sbjct: 185 -------SKPSVKINSSTPVSANKGGCC 205
>sp|P53994|RAB2A_MOUSE Ras-related protein Rab-2A OS=Mus musculus GN=Rab2a PE=1 SV=1
Length = 212
Score = 171 bits (433), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q5R6B6|RAB2A_PONAB Ras-related protein Rab-2A OS=Pongo abelii GN=RAB2A PE=2 SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q4R4X6|RAB2A_MACFA Ras-related protein Rab-2A OS=Macaca fascicularis GN=RAB2A PE=2
SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61019|RAB2A_HUMAN Ras-related protein Rab-2A OS=Homo sapiens GN=RAB2A PE=1 SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P61105|RAB2A_CANFA Ras-related protein Rab-2A OS=Canis familiaris GN=RAB2A PE=1 SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q9D1G1|RAB1B_MOUSE Ras-related protein Rab-1B OS=Mus musculus GN=Rab1b PE=1 SV=1
Length = 201
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 126/203 (62%), Gaps = 9/203 (4%)
Query: 11 YDLSFKILLIGDSGVGKSSLLVSFISSS-VDDLSPTIGVDFKIKLLTVAGKRLKLTIWDT 69
YD FK+LLIGDSGVGKS LL+ F + + TIGVDFKI+ + + GK +KL IWDT
Sbjct: 5 YDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDT 64
Query: 70 AGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGNK 129
AGQERFRT+TSSYYRGA GII+VYDVT +E++ N+ W +E+D Y++ ++ K+LVGNK
Sbjct: 65 AGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQ-WLQEIDRYAS-ENVNKLLVGNK 122
Query: 130 VDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEV--PSLLEEGS 187
D +++VV A G FLE SAK NVEQ F +A +I + P G
Sbjct: 123 SDLTTKKVVDNTTAKEFADSLGVPFLETSAKNATNVEQAFMTMAAEIKKRMGPGAASGG- 181
Query: 188 NVVKRNILKQKPENQSPPIGGCC 210
+R LK P GGCC
Sbjct: 182 ---ERPNLKIDSTPVKPASGGCC 201
>sp|Q90965|RAB2A_CHICK Ras-related protein Rab-2A OS=Gallus gallus GN=RAB2A PE=2 SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|Q01971|RAB2A_RABIT Ras-related protein Rab-2A OS=Oryctolagus cuniculus GN=RAB2A PE=2
SV=1
Length = 212
Score = 171 bits (432), Expect = 4e-42, Method: Compositional matrix adjust.
Identities = 89/172 (51%), Positives = 120/172 (69%), Gaps = 7/172 (4%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFIS---SSVDDLSPTIGVDFKIKLLTVAGKRLKLTI 66
+Y FK ++IGD+GVGKS LL+ F V DL TIGV+F +++T+ GK++KL I
Sbjct: 2 AYAYLFKYIIIGDTGVGKSCLLLQFTDKRFQPVHDL--TIGVEFGARMITIDGKQIKLQI 59
Query: 67 WDTAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLV 126
WDTAGQE FR++T SYYRGA G +LVYD+TRR+TF +L+ W ++ +S N + V ML+
Sbjct: 60 WDTAGQESFRSITRSYYRGAAGALLVYDITRRDTFNHLT-TWLEDARQHS-NSNMVIMLI 117
Query: 127 GNKVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
GNK D +S R V +EEG A A+EHG +F+E SAKT NVE+ F A +I E
Sbjct: 118 GNKSDLESRREVKKEEGEAFAREHGLIFMETSAKTASNVEEAFINTAKEIYE 169
>sp|P22127|RAB10_DIPOM Ras-related protein Rab-10 OS=Diplobatis ommata PE=2 SV=1
Length = 200
Score = 171 bits (432), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/170 (50%), Positives = 120/170 (70%), Gaps = 3/170 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+DFKIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIME 178
K D + +RVV + +G +A+EH F E SAK N+E+ F LA I++
Sbjct: 123 KCDMEDKRVVLKSKGEQIAREHAIRFFETSAKANINIEKAFLTLAEDILQ 172
>sp|Q5ZIT5|RAB10_CHICK Ras-related protein Rab-10 OS=Gallus gallus GN=RAB10 PE=2 SV=1
Length = 200
Score = 171 bits (432), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 88/182 (48%), Positives = 123/182 (67%), Gaps = 3/182 (1%)
Query: 10 SYDLSFKILLIGDSGVGKSSLLVSFISSSVDD-LSPTIGVDFKIKLLTVAGKRLKLTIWD 68
+YDL FK+LLIGDSGVGK+ +L F + + TIG+D KIK + + GK++KL IWD
Sbjct: 5 TYDLLFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWD 64
Query: 69 TAGQERFRTLTSSYYRGAQGIILVYDVTRRETFTNLSDVWAKEVDLYSTNQDCVKMLVGN 128
TAGQERF T+T+SYYRGA GI+LVYD+T ++F N+S W + +D ++ N+D +ML+GN
Sbjct: 65 TAGQERFHTITTSYYRGAMGIMLVYDITNAKSFENISK-WLRNIDEHA-NEDVERMLLGN 122
Query: 129 KVDRDSERVVSREEGIALAKEHGSLFLECSAKTRENVEQCFEQLALKIMEVPSLLEEGSN 188
K D + +RVV + +G +A+EHG F E SAK N+E+ F LA I+ + E S
Sbjct: 123 KCDMEDKRVVPKAKGEQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKTPVKEPNSE 182
Query: 189 VV 190
V
Sbjct: 183 NV 184
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.315 0.132 0.373
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,535,832
Number of Sequences: 539616
Number of extensions: 2783344
Number of successful extensions: 17814
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 1039
Number of HSP's successfully gapped in prelim test: 441
Number of HSP's that attempted gapping in prelim test: 15007
Number of HSP's gapped (non-prelim): 1534
length of query: 211
length of database: 191,569,459
effective HSP length: 112
effective length of query: 99
effective length of database: 131,132,467
effective search space: 12982114233
effective search space used: 12982114233
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)