Citrus Sinensis ID: 028301

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-
Protein Sequence
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Secondary Structure (PSIPRED)
cccccccHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHcccHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHEEEcccccccccccHHHHHHHHHHHHHHHHccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHcccccccHHHHHHHHHHHHHHHHcc
Secondary Structure Prediction (SSPRO)
ccccccHHHHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccccEEEEEEEHHHHHHHHccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHccccHEEEEEEHccc
Coil and Loop (DISEMBL)
mrapkrpihavstwvrrqppkVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEktcaglslkSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLrssymedkdnfAIYYVVVPCAVLALlihpstshniLNRIFWAFCVYLEAVSvlpqlrvmqntkvpfsrllnhsqpiMYLRLVLRGF
Flexible Loop (DISEMBL)
mrapkrpihavstwvrrqppKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPfsrllnhsqpimyLRLVLRGF
Low Complexity Region (SEG)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHtlldlatlattlWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Disordered region (IsUnstruct)
*********AVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVL***
Disordered Region (DISOPRED)
******************PPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Disordered Region (DISEMBL)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Disordered Region (DISPRO)
*****RPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHooHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVPFSRLLNHSQPIMYLRLVLRGF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	211	2.2.26 [Sep-21-2011]
P35402	215	ER lumen protein retainin	no	no	0.644	0.632	0.353	9e-17
O44017	215	ER lumen protein retainin	N/A	no	0.654	0.641	0.349	4e-16
Q86JE5	218	ER lumen protein retainin	yes	no	0.658	0.637	0.324	5e-16
Q09473	213	Putative ER lumen protein	yes	no	0.639	0.633	0.363	9e-16
P48583	213	ER lumen protein retainin	no	no	0.644	0.638	0.331	6e-15
Q611C8	213	ER lumen protein retainin	N/A	no	0.644	0.638	0.310	9e-15
O76767	212	ER lumen protein retainin	yes	no	0.639	0.636	0.342	1e-14
Q5XHA2	212	ER lumen protein retainin	yes	no	0.616	0.613	0.342	4e-14
Q6PAB8	212	ER lumen protein retainin	N/A	no	0.616	0.613	0.321	8e-14
O94270	212	ER lumen protein retainin	yes	no	0.625	0.622	0.355	8e-14

>sp|P35402|ERD2_ARATH ER lumen protein retaining receptor OS=Arabidopsis thaliana GN=ERD2 PE=2 SV=1

 Score = 86.7 bits (213), Expect = 9e-17,   Method: Compositional matrix adjust.
 Identities = 52/147 (35%), Positives = 92/147 (62%), Gaps = 11/147 (7%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F  A +  H I + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y+ 
Sbjct: 2   NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNI 160
            +++ +  +A++L +++ +R +  +R SY +D D F   YVV+ C VL L+++   +   
Sbjct: 61  -SIMKIVFIASSLAIVWCMRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT--- 116

Query: 161 LNRIFWAFCVYLEAVSVLPQLRVMQNT 187
           +  +FWAF +YLEAV++LPQL ++Q +
Sbjct: 117 VQEVFWAFSIYLEAVAILPQLVLLQRS 143

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes H-D-E-L.
Arabidopsis thaliana (taxid: 3702)

>sp|O44017|ERD2_ENTHI ER lumen protein retaining receptor OS=Entamoeba histolytica GN=ERD2 PE=3 SV=1

 Score = 84.7 bits (208), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 50/143 (34%), Positives = 84/143 (58%), Gaps = 5/143 (3%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-T 104
           NLF ++A+ VH + I  L+ K++  K C G+SL+SQ L  I    R    F   Y ++ T
Sbjct: 4   NLFRISADLVHLLSIYFLLTKIISHKNCIGISLRSQILFFIVWVTRYLDIFYNFYSLYNT 63

Query: 105 LLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRI 164
           +L +  L T+ + IY+I    R++Y +  D   ++Y++VPC VLA +     S   +  I
Sbjct: 64  ILKIVYLTTSAYTIYLISKRFRATYDKIHDTLNVWYLIVPCIVLAFIFTEDYS---ITEI 120

Query: 165 FWAFCVYLEAVSVLPQLRVMQNT 187
            W F ++LEAV++LPQ+ ++++T
Sbjct: 121 CWTFSIFLEAVAILPQILLLRST 143

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Entamoeba histolytica (taxid: 5759)

>sp|Q86JE5|ERD2_DICDI ER lumen protein retaining receptor OS=Dictyostelium discoideum GN=kdelr PE=3 SV=1

 Score = 84.3 bits (207), Expect = 5e-16,   Method: Compositional matrix adjust.
 Identities = 48/148 (32%), Positives = 87/148 (58%), Gaps = 9/148 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           NLF    + +H   + +L++K+  +K+CAG+SLKSQ L  I    R   L+ ++V  Y  
Sbjct: 2   NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSLYI- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  +A + + +++I    + +Y +D D F I Y++  CA+L+L+ +  T+  I +
Sbjct: 61  -TFMKITYIAVSYYTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYS 119

Query: 163 ---RIFWAFCVYLEAVSVLPQLRVMQNT 187
               I W F +YLE++++LPQL ++Q T
Sbjct: 120 TFLEILWTFSIYLESIAILPQLILLQRT 147

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Dictyostelium discoideum (taxid: 44689)

>sp|Q09473|ERD22_CAEEL Putative ER lumen protein retaining receptor C28H8.4 OS=Caenorhabditis elegans GN=C28H8.4 PE=3 SV=1

 Score = 83.6 bits (205), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 53/146 (36%), Positives = 90/146 (61%), Gaps = 11/146 (7%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R   L+ +++  Y+ 
Sbjct: 2   NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNIL 161
            T + +  LA T   +Y++ F  RS+YM + D F +  ++VP A+LALLI H      +L
Sbjct: 61  -TTMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLINHDFAPFELL 119

Query: 162 NRIFWAFCVYLEAVSVLPQLRVMQNT 187
               W F +YLEAV++LPQL ++Q+T
Sbjct: 120 ----WTFSIYLEAVAILPQLFLLQST 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|P48583|ERD2_CAEEL ER lumen protein retaining receptor OS=Caenorhabditis elegans GN=erd-2 PE=3 SV=2

 Score = 80.9 bits (198), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 48/145 (33%), Positives = 83/145 (57%), Gaps = 9/145 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R   L+ +F   Y+ 
Sbjct: 2   NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T + +  L  +   +Y++    +++Y  + D+F I ++V+P  +LALLI+      I  
Sbjct: 61  -TAMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLINHEF---IFM 116

Query: 163 RIFWAFCVYLEAVSVLPQLRVMQNT 187
            + W F +YLEAV+++PQL ++  T
Sbjct: 117 EVMWTFSIYLEAVAIMPQLFMLSRT 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Caenorhabditis elegans (taxid: 6239)

>sp|Q611C8|ERD2_CAEBR ER lumen protein retaining receptor OS=Caenorhabditis briggsae GN=erd-2 PE=3 SV=1

 Score = 80.1 bits (196), Expect = 9e-15,   Method: Compositional matrix adjust.
 Identities = 45/145 (31%), Positives = 86/145 (59%), Gaps = 9/145 (6%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F + A+  H++ I +L+ K+ K ++C G+S +SQ L A+    R   L+ SF   Y+ 
Sbjct: 2   NIFRITADLAHAVAIVILLLKIWKSRSCEGISGRSQILFAVTFFTRYLDLFTSFYSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
            T++ +  LA ++  +Y++    +++Y  + D F I ++V+P  +LAL+I+      +  
Sbjct: 61  -TVMKVLFLAGSIGTVYLMWVKFKATYDRNNDTFRIEFLVIPSIILALIIN---HEFMFM 116

Query: 163 RIFWAFCVYLEAVSVLPQLRVMQNT 187
            + W F +YLEAV+++PQL ++  T
Sbjct: 117 EVMWTFSIYLEAVAIMPQLFMLSRT 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Caenorhabditis briggsae (taxid: 6238)

>sp|O76767|ERD2_DROME ER lumen protein retaining receptor OS=Drosophila melanogaster GN=KdelR PE=2 SV=1

 Score = 80.1 bits (196), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 50/146 (34%), Positives = 89/146 (60%), Gaps = 11/146 (7%)

Query: 47  NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
           N+F  A +  H   I +L+ K+ K ++CAG+S KSQ L A+    R   L+ ++V  Y+ 
Sbjct: 2   NIFRFAGDLSHVFAIIILLLKIWKTRSCAGISGKSQILFAVVYLTRYLDLFTTYVSLYN- 60

Query: 103 HTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNIL 161
            +++ +  LAT+   +Y++    +++Y  + D+F I +++VPCA+L+L+I H  T   +L
Sbjct: 61  -SVMKVLFLATSGATVYLMYVKFKATYDHNHDSFRIEFLLVPCALLSLVINHEFTVMEVL 119

Query: 162 NRIFWAFCVYLEAVSVLPQLRVMQNT 187
               W F +YLE+V++LPQL ++  T
Sbjct: 120 ----WTFSIYLESVAILPQLFLVSRT 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Drosophila melanogaster (taxid: 7227)

>sp|Q5XHA2|ERD21_XENTR ER lumen protein retaining receptor 1 OS=Xenopus tropicalis GN=kdelr1 PE=2 SV=1

 Score = 77.8 bits (190), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 48/140 (34%), Positives = 81/140 (57%), Gaps = 10/140 (7%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTLLDL 108
            +  H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +F+  Y+  T + +
Sbjct: 8   GDISHLSAILILLLKIWKSRSCAGISGKSQLLFAIVFTTRYLDLFTNFISLYN--TSMKM 65

Query: 109 ATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLI-HPSTSHNILNRIFWA 167
             +A++   I+MI    +++Y  + D F + +++VP A+LA L+ H  T   IL    W 
Sbjct: 66  VYVASSYATIWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVNHDFTPLEIL----WT 121

Query: 168 FCVYLEAVSVLPQLRVMQNT 187
           F +YLE+V++LPQL ++  T
Sbjct: 122 FSIYLESVAILPQLFMVSKT 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus tropicalis (taxid: 8364)

>sp|Q6PAB8|ER21A_XENLA ER lumen protein retaining receptor 1-A OS=Xenopus laevis GN=kdelr1-a PE=2 SV=1

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 45/140 (32%), Positives = 82/140 (58%), Gaps = 10/140 (7%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDIHTLLDL 108
            +  H   I +L+ K+ K ++CAG+S KSQ L AI    R   L+ +++  Y+  T + +
Sbjct: 8   GDISHLSAIFILLLKIWKSRSCAGISGKSQLLFAIVFTARYLDLFTNYISFYN--TSMKV 65

Query: 109 ATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-RIFWA 167
             +A++   ++MI    +++Y  + D F + +++VP A+LA L++    H+     IFW 
Sbjct: 66  VYVASSYATVWMIYSKFKATYDGNHDTFRVEFLIVPTAILAFLVN----HDFTPLEIFWT 121

Query: 168 FCVYLEAVSVLPQLRVMQNT 187
           F +YLE+V++LPQL ++  T
Sbjct: 122 FSIYLESVAILPQLFMVSKT 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi. This receptor recognizes K-D-E-L.

Xenopus laevis (taxid: 8355)

>sp|O94270|ERD2_SCHPO ER lumen protein retaining receptor OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=erd2 PE=3 SV=1

 Score = 77.0 bits (188), Expect = 8e-14,   Method: Compositional matrix adjust.
 Identities = 49/138 (35%), Positives = 81/138 (58%), Gaps = 6/138 (4%)

Query: 52  AEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYD--IHTLLDLA 109
            +  H   I +L++++ K KTC+GLSLKS  L  +    R Y +    Y    + L+ + 
Sbjct: 8   GDMAHLAAIFLLLHRMKKSKTCSGLSLKSHLLFLLVYVTR-YLNLFWRYKSLYYFLMRIV 66

Query: 110 TLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFC 169
            +A+  ++ Y++   LR +Y +  D F   Y++  CAVLA LI+P TS+ I N I W F 
Sbjct: 67  FIASESYICYLMLMTLRPTYDKRLDTFRTEYILGGCAVLA-LIYP-TSYTISN-ILWTFS 123

Query: 170 VYLEAVSVLPQLRVMQNT 187
           ++LE+V++LPQL ++Q +
Sbjct: 124 IWLESVAILPQLFMLQRS 141

Required for the retention of luminal endoplasmic reticulum proteins. Determines the specificity of the luminal ER protein retention system. Also required for normal vesicular traffic through the Golgi.

Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
255576737	272	ER lumen protein retaining receptor, put	0.909	0.705	0.938	1e-102
224103251	272	predicted protein [Populus trichocarpa]	0.909	0.705	0.896	9e-99
224080568	272	predicted protein [Populus trichocarpa]	0.909	0.705	0.891	3e-97
388500700	272	unknown [Medicago truncatula]	0.909	0.705	0.891	6e-97
356508031	272	PREDICTED: ER lumen protein retaining re	0.909	0.705	0.886	9e-97
297821309	269	ER lumen protein retaining receptor fami	0.890	0.698	0.905	3e-96
356516732	272	PREDICTED: ER lumen protein retaining re	0.909	0.705	0.876	6e-96
225427894	272	PREDICTED: ER lumen protein retaining re	0.909	0.705	0.886	8e-96
356544080	272	PREDICTED: ER lumen protein retaining re	0.909	0.705	0.886	2e-95
255645423	272	unknown [Glycine max]	0.909	0.705	0.871	3e-95

>gi|255576737|ref|XP_002529256.1| ER lumen protein retaining receptor, putative [Ricinus communis] gi|223531292|gb|EEF33134.1| ER lumen protein retaining receptor, putative [Ricinus communis]

 Score =  376 bits (965), Expect = e-102,   Method: Compositional matrix adjust.
 Identities = 182/194 (93%), Positives = 189/194 (97%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MRAPKRPIHAVSTWVRRQPPKVKAFLAVV+GMAALV LRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVAGMAALVFLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTA+FLAVRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  IVLIYKLMKEKTCAGLSLKSQELTAMFLAVRLYCSFVMEYDIHTLLDLATLGTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRFNL+SSYMEDKDNFAIYYVVVPCA+LALLIHPSTSHNI+NRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFAIYYVVVPCAILALLIHPSTSHNIVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224103251|ref|XP_002312984.1| predicted protein [Populus trichocarpa] gi|222849392|gb|EEE86939.1| predicted protein [Populus trichocarpa]

 Score =  365 bits (936), Expect = 9e-99,   Method: Compositional matrix adjust.
 Identities = 174/194 (89%), Positives = 187/194 (96%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR P+RPIH V+TWVRRQPPKVKAFLAVV+GM+ALVLLRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPRRPIHVVTTWVRRQPPKVKAFLAVVAGMSALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLK+QELTA+FLAVRLYCSFVMEYDIHT+LDLATLATTLWVIYM
Sbjct: 61  SVLIYKLMKEKTCAGLSLKTQELTAMFLAVRLYCSFVMEYDIHTILDLATLATTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRFNL+SSYMEDKDNFA+YYV  PCAVLALLIHPST+HN+LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFNLKSSYMEDKDNFALYYVAAPCAVLALLIHPSTAHNLLNRILWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|224080568|ref|XP_002306165.1| predicted protein [Populus trichocarpa] gi|222849129|gb|EEE86676.1| predicted protein [Populus trichocarpa]

 Score =  360 bits (923), Expect = 3e-97,   Method: Compositional matrix adjust.
 Identities = 173/194 (89%), Positives = 183/194 (94%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR PKRPI  V+TWVRRQPPKVKAFLAVV+GM ALVLLRFIVHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPKRPIQVVTTWVRRQPPKVKAFLAVVAGMTALVLLRFIVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLK+QELTA+FLAVRLYCSFVMEYDIHT+LDLATLATTLWVIY 
Sbjct: 61  SVLIYKLMKEKTCAGLSLKTQELTAMFLAVRLYCSFVMEYDIHTVLDLATLATTLWVIYT 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFA+YYV  PCAVLALLIHPSTSHN+LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFALYYVAAPCAVLALLIHPSTSHNLLNRILWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Populus trichocarpa

Species: Populus trichocarpa

Genus: Populus

Family: Salicaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|388500700|gb|AFK38416.1| unknown [Medicago truncatula]

 Score =  358 bits (920), Expect = 6e-97,   Method: Compositional matrix adjust.
 Identities = 173/194 (89%), Positives = 185/194 (95%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR  +  IHA+STWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRPQRTSIHAISTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHT+LDLAT  TT+WVIYM
Sbjct: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATFVTTVWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L++SYME+KDNFAIYYVV+PCAVLALLIHPSTSH+ILNRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMEEKDNFAIYYVVIPCAVLALLIHPSTSHHILNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356508031|ref|XP_003522766.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  358 bits (918), Expect = 9e-97,   Method: Compositional matrix adjust.
 Identities = 172/194 (88%), Positives = 186/194 (95%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ K+ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRSGKKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLAT ATTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATFATTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYME+KDNFAIYYVV+PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEEKDNFAIYYVVIPCAVLALFIHPSTSHHLLNRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNT++  PF+
Sbjct: 181 LRVMQNTQIVEPFT 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297821309|ref|XP_002878537.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata] gi|297324376|gb|EFH54796.1| ER lumen protein retaining receptor family protein [Arabidopsis lyrata subsp. lyrata]

 Score =  356 bits (914), Expect = 3e-96,   Method: Compositional matrix adjust.
 Identities = 172/190 (90%), Positives = 182/190 (95%), Gaps = 2/190 (1%)

Query: 5   KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 64
           K PIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI
Sbjct: 2   KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 61

Query: 65  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFN 124
           YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHT+LDLATL TTLWVIYMIRF 
Sbjct: 62  YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFK 121

Query: 125 LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVM 184
           L+++YME+KDNFA+YYV+VPC VLA+LIHPSTSHNILNRI W FCVYLEAVSVLPQLRVM
Sbjct: 122 LKATYMEEKDNFALYYVLVPCVVLAVLIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query: 185 QNTKV--PFS 192
           QNTK+  PF+
Sbjct: 182 QNTKIVEPFT 191

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356516732|ref|XP_003527047.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  355 bits (911), Expect = 6e-96,   Method: Compositional matrix adjust.
 Identities = 170/194 (87%), Positives = 185/194 (95%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ ++ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFV AEAVHS+GI
Sbjct: 1   MRSGRKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVTAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELTAIFL+VRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTAIFLSVRLYCSFVMEYDIHTLLDLATLVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYV++PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVMIPCAVLALFIHPSTSHHLLNRIAWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|225427894|ref|XP_002273333.1| PREDICTED: ER lumen protein retaining receptor [Vitis vinifera]

 Score =  355 bits (910), Expect = 8e-96,   Method: Compositional matrix adjust.
 Identities = 172/194 (88%), Positives = 181/194 (93%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR P+RPIH VS WVRRQPPKVKAFLAVVSGMAAL LLR +VHDHDNLFVAAEAVHSIGI
Sbjct: 1   MRPPRRPIHTVSAWVRRQPPKVKAFLAVVSGMAALALLRIVVHDHDNLFVAAEAVHSIGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
            VLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD ATL TTLWVIYM
Sbjct: 61  CVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDSATLGTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYVV PCA+LAL+IHPSTSH+ +NRIFWAFCVYLEAVSVLPQ
Sbjct: 121 IRFRLKSSYMEDKDNFAIYYVVGPCALLALVIHPSTSHHFVNRIFWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356544080|ref|XP_003540483.1| PREDICTED: ER lumen protein retaining receptor-like [Glycine max]

 Score =  353 bits (907), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 172/194 (88%), Positives = 183/194 (94%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR  +  IHAV+TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHS+GI
Sbjct: 1   MRPQRTSIHAVTTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKLMKE+TCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLD AT  TTLWVIYM
Sbjct: 61  SVLIYKLMKERTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDFATFVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L++SYME+KDNFAIYYVVVPCAVLALLIHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKASYMEEKDNFAIYYVVVPCAVLALLIHPSTSHHLLNRISWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255645423|gb|ACU23207.1| unknown [Glycine max]

 Score =  353 bits (905), Expect = 3e-95,   Method: Compositional matrix adjust.
 Identities = 169/194 (87%), Positives = 184/194 (94%), Gaps = 2/194 (1%)

Query: 1   MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
           MR+ ++ IHA++TWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFV AEAVHS+GI
Sbjct: 1   MRSGRKSIHAITTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVTAEAVHSLGI 60

Query: 61  SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYM 120
           SVLIYKL+KEKTCAGLSLKSQELT IFL+VRLYCSFVMEYDIHTLLDLATL TTLWVIYM
Sbjct: 61  SVLIYKLIKEKTCAGLSLKSQELTVIFLSVRLYCSFVMEYDIHTLLDLATLVTTLWVIYM 120

Query: 121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
           IRF L+SSYMEDKDNFAIYYV++PCAVLAL IHPSTSH++LNRI WAFCVYLEAVSVLPQ
Sbjct: 121 IRFKLKSSYMEDKDNFAIYYVMIPCAVLALFIHPSTSHHLLNRIAWAFCVYLEAVSVLPQ 180

Query: 181 LRVMQNTKV--PFS 192
           LRVMQNTK+  PF+
Sbjct: 181 LRVMQNTKIVEPFT 194

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	211
TAIR|locus:2047052	269	AT2G21190 "AT2G21190" [Arabido	0.890	0.698	0.836	7.4e-82
TAIR|locus:2141796	273	AT4G38790 "AT4G38790" [Arabido	0.909	0.703	0.794	1.1e-78
TAIR|locus:2005619	272	AT1G75760 "AT1G75760" [Arabido	0.909	0.705	0.773	6.2e-78
TAIR|locus:2198601	272	AT1G19970 "AT1G19970" [Arabido	0.909	0.705	0.721	7.3e-75
TAIR|locus:2090255	272	AT3G25160 "AT3G25160" [Arabido	0.876	0.680	0.529	2.2e-50
WB|WBGene00016195	213	C28H8.4 [Caenorhabditis elegan	0.649	0.643	0.326	1.1e-18
TAIR|locus:2013683	215	ERD2 "AT1G29330" [Arabidopsis	0.644	0.632	0.367	1.6e-17
TAIR|locus:2086954	215	ERD2B "AT3G25040" [Arabidopsis	0.649	0.637	0.331	4.1e-17
DICTYBASE|DDB_G0272124	218	kdelr "ER lumen protein retain	0.658	0.637	0.317	8.6e-17
WB|WBGene00001331	213	erd-2 [Caenorhabditis elegans	0.649	0.643	0.312	6e-16

TAIR|locus:2047052 AT2G21190 "AT2G21190" [Arabidopsis thaliana (taxid:3702)]

 Score = 821 (294.1 bits), Expect = 7.4e-82, P = 7.4e-82
 Identities = 159/190 (83%), Positives = 169/190 (88%)

Query:     5 KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLI 64
             K PIHAVSTWVRRQPPKVKAFLAVVSGMAALVLL+ IVHDHDNLFVAAEAVHSIGISVLI
Sbjct:     2 KTPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLKLIVHDHDNLFVAAEAVHSIGISVLI 61

Query:    65 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFN 124
             YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH            WVIYMIRFN
Sbjct:    62 YKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTILDLATLGTTLWVIYMIRFN 121

Query:   125 LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVM 184
             L+++YME+KDNFA+YYV+ PC VLA+ IHPSTSHNILNRI W FCVYLEAVSVLPQLRVM
Sbjct:   122 LKTTYMEEKDNFALYYVLAPCVVLAVWIHPSTSHNILNRISWGFCVYLEAVSVLPQLRVM 181

Query:   185 QNTKV--PFS 192
             QNTK+  PF+
Sbjct:   182 QNTKIVEPFT 191

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2141796 AT4G38790 "AT4G38790" [Arabidopsis thaliana (taxid:3702)]

 Score = 791 (283.5 bits), Expect = 1.1e-78, P = 1.1e-78
 Identities = 155/195 (79%), Positives = 166/195 (85%)

Query:     1 MRAP-KRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIG 59
             M+A  K PIH V +WVRRQPPKVKAFLAVV+GMAALVLLRFIVHDHDNLFVAAEAVHSIG
Sbjct:     1 MKATTKTPIHVVWSWVRRQPPKVKAFLAVVTGMAALVLLRFIVHDHDNLFVAAEAVHSIG 60

Query:    60 ISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIY 119
             I VLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCS VMEYDIH            WVI+
Sbjct:    61 ICVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSIVMEYDIHTILDLATLGTTLWVIF 120

Query:   120 MIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLP 179
             MIRF LR+SYMEDKDNF +YYV+ PC  LA+ IHPSTSHNI+NRI WA CVYLEAVSVLP
Sbjct:   121 MIRFKLRASYMEDKDNFPLYYVLAPCVALAVFIHPSTSHNIINRISWALCVYLEAVSVLP 180

Query:   180 QLRVMQNTKV--PFS 192
             QLRVMQNTK+  PF+
Sbjct:   181 QLRVMQNTKIVEPFT 195

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2005619 AT1G75760 "AT1G75760" [Arabidopsis thaliana (taxid:3702)]

 Score = 784 (281.0 bits), Expect = 6.2e-78, P = 6.2e-78
 Identities = 150/194 (77%), Positives = 168/194 (86%)

Query:     1 MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
             M+A  RPIHAV+TWVRRQPPKVK FL VVS M ALVLLR IVHDHDNLFVAAEAVHS+GI
Sbjct:     1 MKAATRPIHAVTTWVRRQPPKVKGFLGVVSAMTALVLLRVIVHDHDNLFVAAEAVHSLGI 60

Query:    61 SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
             SVLIYKL KE+TCAGLSLKSQELTA+FLAVRLYCSFVME+DIH            +VIYM
Sbjct:    61 SVLIYKLTKERTCAGLSLKSQELTALFLAVRLYCSFVMEFDIHTLLDSATLVTTLFVIYM 120

Query:   121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
             IRF L++SYM+DKDNFAIYYVV+PC VL++LIHPST H+I+N+I WAFCVYLEAVSVLPQ
Sbjct:   121 IRFKLKASYMDDKDNFAIYYVVIPCVVLSVLIHPSTHHHIINKISWAFCVYLEAVSVLPQ 180

Query:   181 LRVMQNTKV--PFS 192
             LRVMQNTK+  PF+
Sbjct:   181 LRVMQNTKIVEPFT 194

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0006007 "glucose catabolic process" evidence=RCA

TAIR|locus:2198601 AT1G19970 "AT1G19970" [Arabidopsis thaliana (taxid:3702)]

 Score = 755 (270.8 bits), Expect = 7.3e-75, P = 7.3e-75
 Identities = 140/194 (72%), Positives = 163/194 (84%)

Query:     1 MRAPKRPIHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGI 60
             M+A K PI +V  W+RRQPPKVKAFL VV+ M  LVLLR IVH+HDNLFVA+EAVH++GI
Sbjct:     1 MKAEKNPIQSVMAWIRRQPPKVKAFLGVVTAMTVLVLLRVIVHEHDNLFVASEAVHAVGI 60

Query:    61 SVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYM 120
             +VLIYKL KEKTCAG+SLK+QELTA+FLAVRLYCSFVME+D+H            WV+YM
Sbjct:    61 AVLIYKLTKEKTCAGISLKTQELTALFLAVRLYCSFVMEFDLHTFLDSATLVTTLWVVYM 120

Query:   121 IRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQ 180
             IRF LR +YMEDKDNFAIY+VV+PCAVL+  IHPST H+I+NRI WAFCVYLEAVSVLPQ
Sbjct:   121 IRFKLRPTYMEDKDNFAIYFVVIPCAVLSFFIHPSTRHHIINRISWAFCVYLEAVSVLPQ 180

Query:   181 LRVMQNTKV--PFS 192
             LRVMQNTK+  PF+
Sbjct:   181 LRVMQNTKIVEPFT 194

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

TAIR|locus:2090255 AT3G25160 "AT3G25160" [Arabidopsis thaliana (taxid:3702)]

 Score = 524 (189.5 bits), Expect = 2.2e-50, P = 2.2e-50
 Identities = 99/187 (52%), Positives = 137/187 (73%)

Query:     8 IHAVSTWVRRQPPKVKAFLAVVSGMAALVLLRFIVHDHDNLFVAAEAVHSIGISVLIYKL 67
             ++ V  W+R+Q  KVK  L ++  +  +VLL+F V +H++ F+A+E +H+ GI +LIYKL
Sbjct:    10 VNVVFGWLRQQSNKVKIALGIIISLILVVLLKFTVRNHNHFFIASELIHAAGILILIYKL 69

Query:    68 MKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXXXXXXXXXXXXWVIYMIRFNLRS 127
              ++KTC+GLSLKSQE+TAIFLAVRL CS  ME DIH            WVIYMIR+ L++
Sbjct:    70 TRQKTCSGLSLKSQEVTAIFLAVRLICSINMEGDIHTVLDFATLVSTLWVIYMIRYKLKA 129

Query:   128 SYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNT 187
             SY++  D    YYV+VP A+LAL+I+PSTS++  +RI WAFCVY E+VSVLPQLR+MQN 
Sbjct:   130 SYIKSLDTCYNYYVLVPSAILALIINPSTSYSYFHRILWAFCVYTESVSVLPQLRLMQNA 189

Query:   188 KV--PFS 192
             ++  PF+
Sbjct:   190 QIIEPFT 196

GO:0004872 "receptor activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

WB|WBGene00016195 C28H8.4 [Caenorhabditis elegans (taxid:6239)]

 Score = 225 (84.3 bits), Expect = 1.1e-18, P = 1.1e-18
 Identities = 47/144 (32%), Positives = 82/144 (56%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXX 105
             N+F ++A+  H + I +L+ K+ K ++C+G+S +SQ L A+    R    F     ++  
Sbjct:     2 NIFRISADMSHLLAIIILLLKIWKSRSCSGISARSQILFALVFTARYLDLFSTYISLYNT 61

Query:   106 XXXXXXXXXXWV-IYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN-R 163
                       +  +Y++ F  RS+YM + D F +  ++VP A+LALLI+    H+     
Sbjct:    62 TMKITFLAATYATVYLMFFKFRSTYMRESDTFRVELLIVPAAILALLIN----HDFAPFE 117

Query:   164 IFWAFCVYLEAVSVLPQLRVMQNT 187
             + W F +YLEAV++LPQL ++Q+T
Sbjct:   118 LLWTFSIYLEAVAILPQLFLLQST 141

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

TAIR|locus:2013683 ERD2 "AT1G29330" [Arabidopsis thaliana (taxid:3702)]

 Score = 214 (80.4 bits), Expect = 1.6e-17, P = 1.6e-17
 Identities = 54/147 (36%), Positives = 81/147 (55%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYD- 101
             N+F  A +  H I + +L+ K+   K+CAG+SLK+QEL A+    R   L+  +V  Y+ 
Sbjct:     2 NIFRFAGDMSHLISVLILLLKIYATKSCAGISLKTQELYALVFLTRYLDLFTDYVSLYNS 61

Query:   102 IHXXXXXXXXXXXXWVIYMIRFNL-RSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNI 160
             I             W   M R  L R SY +D D F   YVV+ C VL L+++   +   
Sbjct:    62 IMKIVFIASSLAIVWC--MRRHPLVRRSYDKDLDTFRHQYVVLACFVLGLILNEKFT--- 116

Query:   161 LNRIFWAFCVYLEAVSVLPQLRVMQNT 187
             +  +FWAF +YLEAV++LPQL ++Q +
Sbjct:   117 VQEVFWAFSIYLEAVAILPQLVLLQRS 143

GO:0004872 "receptor activity" evidence=ISS

GO:0006621 "protein retention in ER lumen" evidence=IEA;IGI

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=IEA;ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0005801 "cis-Golgi network" evidence=IDA

GO:0005783 "endoplasmic reticulum" evidence=IDA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0006914 "autophagy" evidence=RCA

GO:0009414 "response to water deprivation" evidence=RCA

GO:0042538 "hyperosmotic salinity response" evidence=RCA

GO:0005046 "KDEL sequence binding" evidence=IGI

TAIR|locus:2086954 ERD2B "AT3G25040" [Arabidopsis thaliana (taxid:3702)]

 Score = 210 (79.0 bits), Expect = 4.1e-17, P = 4.1e-17
 Identities = 49/148 (33%), Positives = 85/148 (57%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR---LYCSFVMEYDI 102
             N+F +A +  H   + VL+ K+   K+CAG+SLK+QEL AI  A R   ++ SFV  Y+ 
Sbjct:     2 NIFRLAGDMTHLASVLVLLLKIHTIKSCAGVSLKTQELYAIVFATRYLDIFTSFVSLYNT 61

Query:   103 HXXXXXXXXXXXXWVIYMIRFN--LRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNI 160
                           +++ ++++  +  +Y  ++D F  +++V+PC +LALLIH   +   
Sbjct:    62 SMKLVFLGSSFS--IVWYMKYHKAVHRTYDREQDTFRHWFLVLPCFLLALLIHEKFT--- 116

Query:   161 LNRIFWAFCVYLEAVSVLPQLRVMQNTK 188
                + W   +YLEAV++LPQL ++Q T+
Sbjct:   117 FLEVLWTSSLYLEAVAILPQLVLLQRTR 144

GO:0004872 "receptor activity" evidence=ISS

GO:0005739 "mitochondrion" evidence=ISM

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0015031 "protein transport" evidence=ISS

GO:0016021 "integral to membrane" evidence=ISS

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IDA

GO:0010204 "defense response signaling pathway, resistance gene-independent" evidence=IMP

GO:0006084 "acetyl-CoA metabolic process" evidence=RCA

GO:0016126 "sterol biosynthetic process" evidence=RCA

GO:0016132 "brassinosteroid biosynthetic process" evidence=RCA

GO:0030244 "cellulose biosynthetic process" evidence=RCA

GO:0048193 "Golgi vesicle transport" evidence=RCA

DICTYBASE|DDB_G0272124 kdelr "ER lumen protein retaining receptor" [Dictyostelium discoideum (taxid:44689)]

 Score = 207 (77.9 bits), Expect = 8.6e-17, P = 8.6e-17
 Identities = 47/148 (31%), Positives = 84/148 (56%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQEL-TAIFLA--VRLYCSFVMEYDI 102
             NLF    + +H   + +L++K+  +K+CAG+SLKSQ L T +F A  + L+ ++V  Y  
Sbjct:     2 NLFSFLGDMLHLGSMLILLFKIKNDKSCAGVSLKSQILFTIVFTARYLDLFTNYVSLYI- 60

Query:   103 HXXXXXXXXXXXXWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILN 162
                          + +++I    + +Y +D D F I Y++  CA+L+L+ +  T+  I +
Sbjct:    61 -TFMKITYIAVSYYTLHLIARKYKFTYDKDHDTFKIVYLIASCAILSLITYDKTTIGIYS 119

Query:   163 ---RIFWAFCVYLEAVSVLPQLRVMQNT 187
                 I W F +YLE++++LPQL ++Q T
Sbjct:   120 TFLEILWTFSIYLESIAILPQLILLQRT 147

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016192 "vesicle-mediated transport" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0015031 "protein transport" evidence=IEA

GO:0006810 "transport" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005789 "endoplasmic reticulum membrane" evidence=IEA

WB|WBGene00001331 erd-2 [Caenorhabditis elegans (taxid:6239)]

 Score = 199 (75.1 bits), Expect = 6.0e-16, P = 6.0e-16
 Identities = 45/144 (31%), Positives = 77/144 (53%)

Query:    47 NLF-VAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHXX 105
             NLF   A+  H+I I VL+ K+ K ++C G+S +SQ L A+    R    F   +  +  
Sbjct:     2 NLFRFTADVAHAIAIVVLLLKIWKSRSCEGISGRSQLLFALVFVTRYLDLFTNFFSFYNT 61

Query:   106 XXXXXXXXXXW-VIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHN-ILNR 163
                       +  +Y++    +++Y  + D+F I ++V+P  +LALLI+    H  I   
Sbjct:    62 AMKIFYLVASFGTVYLMWAKFKATYDRNNDSFRIEFLVIPSMILALLIN----HEFIFME 117

Query:   164 IFWAFCVYLEAVSVLPQLRVMQNT 187
             + W F +YLEAV+++PQL ++  T
Sbjct:   118 VMWTFSIYLEAVAIMPQLFMLSRT 141

GO:0006621 "protein retention in ER lumen" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0046923 "ER retention sequence binding" evidence=IEA

GO:0009792 "embryo development ending in birth or egg hatching" evidence=IMP

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	211
pfam00810	143	pfam00810, ER_lumen_recept, ER lumen protein retai	4e-35
COG5196	214	COG5196, ERD2, ER lumen protein retaining receptor	5e-19

>gnl|CDD|144416 pfam00810, ER_lumen_recept, ER lumen protein retaining receptor

 Score =  121 bits (305), Expect = 4e-35
 Identities = 43/120 (35%), Positives = 71/120 (59%), Gaps = 4/120 (3%)

Query: 72  TCAGLSLKSQELTAIFLAVRLYCSFVMEYDIH-TLLDLATLATTLWVIYMIRFNLRSSYM 130
           +C+GLSLK+Q L AI    R    F     ++ T++ +  + ++++ IY+++F  +++Y 
Sbjct: 1   SCSGLSLKTQILYAIVFLTRYLDLFEGYISLYNTIMKILFIVSSVYTIYLMKFKYKATYD 60

Query: 131 EDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKVP 190
            D D F I Y++VPC VLAL+ H          I W F +YLE+V++LPQL ++Q T   
Sbjct: 61  RDIDTFKIEYLIVPCLVLALIFH---HSYSFLEILWTFSIYLESVAILPQLFMLQKTGEV 117

Length = 143

>gnl|CDD|227523 COG5196, ERD2, ER lumen protein retaining receptor [Intracellular trafficking and secretion]

 Score = 81.0 bits (200), Expect = 5e-19
 Identities = 41/132 (31%), Positives = 77/132 (58%), Gaps = 5/132 (3%)

Query: 56  HSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYD--IHTLLDLATLAT 113
           H   I+VLI+K+ + ++C+GLSLK+Q L ++    R    F        ++L+ +  + +
Sbjct: 12  HLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLYNSLMKILFIGS 71

Query: 114 TLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLE 173
            +++++++RF  RS+Y +  D F I  ++V  AV +L         I N + W F ++LE
Sbjct: 72  QVYILFLMRFKYRSTYDKKLDTFNILTLLVGSAVFSLFFT--RGGTISN-VLWTFSLWLE 128

Query: 174 AVSVLPQLRVMQ 185
           +V++LPQL ++Q
Sbjct: 129 SVAILPQLVMLQ 140

Length = 214

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	211
KOG3106	212	consensus ER lumen protein retaining receptor [Int	100.0
COG5196	214	ERD2 ER lumen protein retaining receptor [Intracel	100.0
PF00810	147	ER_lumen_recept: ER lumen protein retaining recept	100.0
TIGR00951	220	2A43 Lysosomal Cystine Transporter.	95.6
KOG3211	230	consensus Predicted endoplasmic reticulum membrane	95.24
PF04193	61	PQ-loop: PQ loop repeat	89.28
smart00679	32	CTNS Repeated motif present between transmembrane	82.35

>KOG3106 consensus ER lumen protein retaining receptor [Intracellular trafficking, secretion, and vesicular transport]

Probab=100.00  E-value=1.5e-63  Score=421.45  Aligned_cols=162  Identities=42%  Similarity=0.681  Sum_probs=155.4

Q ss_pred             CcHHHHHhhHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHhhhcceee-eechHHHHHHHHHHHHHHHHHHHhhc
Q 028301           45 HDNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFV-MEYDIHTLLDLATLATTLWVIYMIRF  123 (211)
Q Consensus        45 ~n~f~llgdl~Hl~s~~iLl~KI~~~KS~~GiSlKTQ~Ly~iVf~~Rl~~~f~-~~y~~~t~~k~~~i~~s~~iiylm~~  123 (211)
                      +|.||++||++|++|+++|++||+|+|||+|||+|||+|||+||++||+|.|. .++++||+||+++++++.+++|+|++
T Consensus         1 mn~fr~~gd~~H~~~i~vLi~Ki~ktrsCaGiSlKSQ~L~Alvf~~Ryldlf~~~~s~ynt~mki~fl~~t~~ivymi~~   80 (212)
T KOG3106|consen    1 MNNFRFAGDLSHLAAIIVLILKIWKTKSCAGISLKSQELFALVFATRYLDLFTFYESLYNTIMKIAFLASTLWIVYMIRF   80 (212)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHhcCccccccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999999987 56778899999999999999999999


Q ss_pred             cccccccccccccchhhhHHHHHHHHHHhCCCCCcchhhHHHHHHHHHHhhhhhhhHHHHhhhcCC--cchhHHHHHHHH
Q 028301          124 NLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKV--PFSRLLNHSQPI  201 (211)
Q Consensus       124 k~k~TYd~~~Dtf~~~~liip~~vLAli~hp~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~--~~Tshyv~al~~  201 (211)
                      |+|+|||+|+|||+++|+++||+++|+++||+.   .+.|++||||+|||||||||||+|+||+||  ++|+||++|+|+
T Consensus        81 k~~~tYd~~~DtFri~~llvp~~vlsl~i~~~~---t~~eilWtFsiyLEsVaILPQL~~lq~tg~~E~~TahYvfaLG~  157 (212)
T KOG3106|consen   81 KLRATYDKEKDTFRIEYLLVPSAVLSLLINHSF---TILEILWTFSIYLESVAILPQLFMLQKTGEAETITAHYLFALGL  157 (212)
T ss_pred             HHHHHHhcccCceeEEEEehhheeeeeeecCCc---cHHHHHHHHHHHHHHHHHhHHHHHHHhcCCccchHHHHHHHHHH
Confidence            999999999999999999999999999999984   499999999999999999999999999998  999999999995


Q ss_pred             ----HHHHHHHh
Q 028301          202 ----MYLRLVLR  209 (211)
Q Consensus       202 ----~~~~~~~~  209 (211)
                          |..||++|
T Consensus       158 yR~ly~~~WI~r  169 (212)
T KOG3106|consen  158 YRALYIANWIYR  169 (212)
T ss_pred             HHHHHHHHHHHH
Confidence                55799987

>COG5196 ERD2 ER lumen protein retaining receptor [Intracellular trafficking and secretion]

Probab=100.00  E-value=2.6e-53  Score=354.75  Aligned_cols=161  Identities=26%  Similarity=0.513  Sum_probs=149.7

Q ss_pred             cHHHHHhhHHHHHHHHHHHHHhhccccccccccchhHHHHHHHHhhhcceeeeec--hHHHHHHHHHHHHHHHHHHHhhc
Q 028301           46 DNLFVAAEAVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEY--DIHTLLDLATLATTLWVIYMIRF  123 (211)
Q Consensus        46 n~f~llgdl~Hl~s~~iLl~KI~~~KS~~GiSlKTQ~Ly~iVf~~Rl~~~f~~~y--~~~t~~k~~~i~~s~~iiylm~~  123 (211)
                      |+||++||++|++|+.+|+.||.++|+|+|+|+|||.||++||++||+|.|...+  -+|.+||+++|+++.|++++|+.
T Consensus         2 ~~Fr~lGD~~Hlasi~vLih~ik~tr~csGlSlKtq~Ly~lVfitRYldLf~f~~~slYn~lMki~FI~s~~yI~~lm~~   81 (214)
T COG5196           2 DTFRFLGDFLHLASIAVLIHKIKRTRSCSGLSLKTQFLYSLVFITRYLDLFDFYARSLYNSLMKILFIGSQVYILFLMRF   81 (214)
T ss_pred             cHHHHHhHHHHHHHHHHHHHHhhhcceecceehHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence            7899999999999999999999999999999999999999999999998863221  24599999999999999999999


Q ss_pred             cccccccccccccchhhhHHHHHHHHHHhCCCCCcchhhHHHHHHHHHHhhhhhhhHHHHhhhcCC--cchhHHHHHHHH
Q 028301          124 NLRSSYMEDKDNFAIYYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKV--PFSRLLNHSQPI  201 (211)
Q Consensus       124 k~k~TYd~~~Dtf~~~~liip~~vLAli~hp~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~--~~Tshyv~al~~  201 (211)
                      ++++||||..|||+++++++||+++|+++|.+   +.+.+++||||+|||||||||||+|+||.||  ++|+||++|.|+
T Consensus        82 ~~r~tYdk~lDtF~i~~ll~gsav~slff~~~---~tisnvlwtfS~wLESVAILPQL~mLq~~GeteslT~hYvfamgL  158 (214)
T COG5196          82 KYRSTYDKKLDTFNILTLLVGSAVFSLFFTRG---GTISNVLWTFSLWLESVAILPQLVMLQEAGETESLTSHYVFAMGL  158 (214)
T ss_pred             cccchHHHhhhhhhhhhhhhhhhhheeeecCC---ccHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcceeHHHHHHHHHH
Confidence            99999999999999999999999999999876   6699999999999999999999999999999  999999999996


Q ss_pred             HH----HHHHHh
Q 028301          202 MY----LRLVLR  209 (211)
Q Consensus       202 ~~----~~~~~~  209 (211)
                      ||    -+|.+|
T Consensus       159 YRalYip~wI~r  170 (214)
T COG5196         159 YRALYIPYWILR  170 (214)
T ss_pred             HHHhhhhHHHHH
Confidence            54    577776

>PF00810 ER_lumen_recept: ER lumen protein retaining receptor; InterPro: IPR000133 Proteins resident in the lumen of the endoplasmic reticulum (ER) contain a C-terminal tetrapeptide, commonly known as Lys-Asp-Glu-Leu (KDEL) in mammals and His-Asp-Glu-Leu (HDEL) in yeast (Saccharomyces cerevisiae) that acts as a signal for their retrieval from subsequent compartments of the secretory pathway

Probab=100.00  E-value=7.1e-50  Score=327.12  Aligned_cols=137  Identities=34%  Similarity=0.631  Sum_probs=127.3

Q ss_pred             cccccccchhHHHHHHHHhhhcce--eeee-chHHHHHHHHHHHHHHHHHHHhhccccccccccccccchhhhHHHHHHH
Q 028301           72 TCAGLSLKSQELTAIFLAVRLYCS--FVME-YDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVVPCAVL  148 (211)
Q Consensus        72 S~~GiSlKTQ~Ly~iVf~~Rl~~~--f~~~-y~~~t~~k~~~i~~s~~iiylm~~k~k~TYd~~~Dtf~~~~liip~~vL  148 (211)
                      ||+|+|+|||+||++|+++||+|+  +... ..+|++||++++++|++++|+|+.|||+|||+++|+|+..++++||++|
T Consensus         1 S~~GlSlktq~ly~~vf~~Ryldl~~f~~~~s~y~~~~k~~~i~~s~~iiyli~~~~~~Ty~~~~D~f~~~~li~p~~vL   80 (147)
T PF00810_consen    1 SCSGLSLKTQILYAIVFLTRYLDLFWFESYLSLYNTIMKVFFIVSSLYIIYLIFFKYKSTYDKEIDTFRLEYLIVPCFVL   80 (147)
T ss_pred             CcchhhHHHHHHHHHHHHHHHHHHHHHhhHHHHHHHHHHHHHHHHHHHHHHhhheeehhhhhccccchhhhHHHHHHHHH
Confidence            799999999999999999999998  4321 1246999999999999999999999999999999999999999999999


Q ss_pred             HHHhCCCCCcchhhHHHHHHHHHHhhhhhhhHHHHhhhcCC--cchhHHHHHHHHH----HHHHHHh
Q 028301          149 ALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKV--PFSRLLNHSQPIM----YLRLVLR  209 (211)
Q Consensus       149 Ali~hp~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~--~~Tshyv~al~~~----~~~~~~~  209 (211)
                      |+++|| .+++++.|++||||+|||||||+|||+|+||+||  ++||||+++||++    .+||++|
T Consensus        81 a~i~~p-~~~~~~~ei~wtfSi~LEsvAIlPQL~m~~k~~~ve~ltshYv~~Lg~yR~ly~~~Wi~r  146 (147)
T PF00810_consen   81 ALIFHP-LNSFFFLEILWTFSIYLESVAILPQLFMLQKTGEVENLTSHYVFALGLYRALYLLNWIYR  146 (147)
T ss_pred             HHHHhc-cccchHHHHHHHHHHHHHHHHHhHHHHHHHHhcCeeehHHHHHHHHHHHHHHHHHHHHHh
Confidence            999999 7789999999999999999999999999999998  9999999999955    5789887

The receptor for this signal is a ~26 kDa Golgi membrane protein, initially identified as the ERD2 gene product in S. cerevisiae. The receptor molecule, known variously as the ER lumen protein retaining receptor or the 'KDEL receptor', is believed to cycle between the cis side of the Golgi apparatus and the ER. It has also been characterised in a number of other species, including plants, Plasmodium, Drosophila and mammals. In mammals, 2 highly related forms of the receptor are known. The KDEL receptor is a highly hydrophobic protein of 220 residues; its sequence exhibits 7 hydrophobic regions, all of which have been suggested to traverse the membrane []. More recently, however, it has been suggested that only 6 of these regions are transmembrane (TM), resulting in both N- and C-termini on the cytoplasmic side of the membrane.; GO: 0046923 ER retention sequence binding, 0006621 protein retention in ER lumen, 0016021 integral to membrane

>TIGR00951 2A43 Lysosomal Cystine Transporter

Probab=95.60  E-value=0.28  Score=42.66  Aligned_cols=141  Identities=16%  Similarity=0.167  Sum_probs=69.2

Q ss_pred             HHHHHHHHHhhccccccccccchhHHHHHHHHhh-------hcce-eeeech---HHHHHHHHHHHH-----HHHHHHHh
Q 028301           58 IGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVR-------LYCS-FVMEYD---IHTLLDLATLAT-----TLWVIYMI  121 (211)
Q Consensus        58 ~s~~iLl~KI~~~KS~~GiSlKTQ~Ly~iVf~~R-------l~~~-f~~~y~---~~t~~k~~~i~~-----s~~iiylm  121 (211)
                      .+.+==+.|++|+||++|+|+..-.+-.+.+++-       +++. ...+|.   +....|-++++.     ++.+.+.+
T Consensus        17 ~~~~PQi~~n~k~ks~~GlS~~~~~l~~~g~~~~~~yn~~~~~~~~~~~~~~~~~~~v~~edl~~ai~~~il~~l~~~q~   96 (220)
T TIGR00951        17 ISFYPQIIKNWRRKSAEGLSFDFVMLNLVGFTAYVIFNFLQLYCWSITNEFPLSSPGVTQNDVFFTLHAILICFIVLHQC   96 (220)
T ss_pred             HHHhhHHHHHHhccccCCcCHHHHHHHHHHHHHHHHHHHHHhcchhhhhccccccCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence            3444446999999999999999988655555443       2211 111121   111112222222     22222222


Q ss_pred             hccccccccccccccc--h--hhhHHHHHHHHHHhCCCCCcchhhHHHHHHHHHHhhhhhhhHHHHhhhcCC----cchh
Q 028301          122 RFNLRSSYMEDKDNFA--I--YYVVVPCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKV----PFSR  193 (211)
Q Consensus       122 ~~k~k~TYd~~~Dtf~--~--~~liip~~vLAli~hp~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~----~~Ts  193 (211)
                      . ++.....+...+..  .  .++.+.+..+..+..+. ..-.+.+.++...+-+-.++-+||..+-.|.|-    ++-+
T Consensus        97 ~-~~~~~~~~~s~~~~~~~~~~~~~~~~~~~~~~~~~~-~~l~~l~~l~~iki~is~ikyiPQi~~Ny~~ksT~glSi~~  174 (220)
T TIGR00951        97 G-DYERGWQRVSNPWILRILVALLACFATLLVALLSPI-TPLAFVTMLSYIKVAVTLVKYFPQAATNYHNKSTGQLSIIT  174 (220)
T ss_pred             h-hccccccccchhHHHHHHHHHHHHHHHHHHHHHhcC-ChHHHHHHHHHHHHHHHHHHHhHHHHHHHhcCCCCcCCHHH
Confidence            1 22111111111111  1  12222233333333322 223466777777888888899999999988653    5555


Q ss_pred             HHHHHHH
Q 028301          194 LLNHSQP  200 (211)
Q Consensus       194 hyv~al~  200 (211)
                      -+.-..|
T Consensus       175 i~Ld~~G  181 (220)
T TIGR00951       175 VFLDFTG  181 (220)
T ss_pred             HHHHHHH
Confidence            4444444

>KOG3211 consensus Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization [General function prediction only]

Probab=95.24  E-value=0.24  Score=43.58  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=73.1

Q ss_pred             HHHhhccccccccccchhHHHHHHHHhhhcceeeeechHHHHHHHHHHHHHHHHHHHhhccccccccccccccchhhhHH
Q 028301           64 IYKLMKEKTCAGLSLKSQELTAIFLAVRLYCSFVMEYDIHTLLDLATLATTLWVIYMIRFNLRSSYMEDKDNFAIYYVVV  143 (211)
Q Consensus        64 l~KI~~~KS~~GiSlKTQ~Ly~iVf~~Rl~~~f~~~y~~~t~~k~~~i~~s~~iiylm~~k~k~TYd~~~Dtf~~~~lii  143 (211)
                      +.||...||+.|+|.-+|+|=.+-+..-+--...+.|+.-+.+|..++..+.+++-++-+.|+-.- -..|.+--.+.++
T Consensus        50 I~kI~aakSa~GLSv~s~~LElvgytvtl~Y~~~~g~pFss~gE~~fLl~Q~vili~~if~f~~~~-~~~v~~l~~~~~v  128 (230)
T KOG3211|consen   50 IMKIRAAKSARGLSVVSLLLELVGYTVTLSYSYTSGYPFSSYGEYPFLLLQAVILILCIFHFSGQT-VTVVQFLGYIALV  128 (230)
T ss_pred             HHHHHhhcccccccHHHHHHHHHHHHheeeehhhcCCCchhHHHHHHHHHHHHHHHHHHHHhccce-eehhhHHHHHHHH
Confidence            489999999999999999988777766432223334445578999999999998888888877111 1123333333333


Q ss_pred             HHHHHHHHhCCCCCcchhhHHHHHHHHHHhhhhhhhHHHHhhhcCC
Q 028301          144 PCAVLALLIHPSTSHNILNRIFWAFCVYLEAVSVLPQLRVMQNTKV  189 (211)
Q Consensus       144 p~~vLAli~hp~~~~~~~~eilWtFSiyLEsVAILPQL~mlqk~g~  189 (211)
                      +....+    +..+ .++.+..=+-.+-.-.++=+||..-..|++.
T Consensus       129 ~~~~~s----k~~p-~~~~~L~~~~~l~i~v~sr~~Qi~~n~~~~~  169 (230)
T KOG3211|consen  129 VSVLAS----KALP-LWIITLAQNLCLPIVVVSRLLQIQCNYHNRS  169 (230)
T ss_pred             HHHHHH----hhhh-HHHHHHHHhcCchhhhHHHHHHHHHHhcccc
Confidence            322222    2111 2233444344444445777788877776543

>PF04193 PQ-loop: PQ loop repeat

Probab=89.28  E-value=0.54  Score=32.10  Aligned_cols=40  Identities=28%  Similarity=0.120  Sum_probs=30.5

Q ss_pred             HHHHHHHHHHHHHhhccccccccccchhHHHHHHHHhhhc
Q 028301           54 AVHSIGISVLIYKLMKEKTCAGLSLKSQELTAIFLAVRLY   93 (211)
Q Consensus        54 l~Hl~s~~iLl~KI~~~KS~~GiSlKTQ~Ly~iVf~~Rl~   93 (211)
                      ..-+++.+==++|.+|+||+.|+|.-+..+..+..+++..
T Consensus        11 ~~~~~~~lPQi~~~~k~ks~~glS~~~~~l~~~g~~~~~~   50 (61)
T PF04193_consen   11 VLWIISFLPQIIKNYKRKSTGGLSLWFLLLWLIGSILWVL   50 (61)
T ss_pred             HHHHHHHHhHHHHHHHccccccccHHHHHHHHHHHHHHHH
Confidence            3334444445699999999999999999988887777743

>smart00679 CTNS Repeated motif present between transmembrane helices in cystinosin, yeast ERS1p, mannose-P-dolichol utilization defect 1, and other hypothetical proteins

Probab=82.35  E-value=0.97  Score=27.07  Aligned_cols=22  Identities=32%  Similarity=0.249  Sum_probs=18.1

Q ss_pred             HHHhhccccccccccchhHHHH
Q 028301           64 IYKLMKEKTCAGLSLKSQELTA   85 (211)
Q Consensus        64 l~KI~~~KS~~GiSlKTQ~Ly~   85 (211)
                      ++|++++||+.|+|.-...+-.
T Consensus         7 i~~~~~~ks~~glS~~~~~l~~   28 (32)
T smart00679        7 IIKNYRRKSTEGLSILFVLLWL   28 (32)
T ss_pred             HHHHHHcCCcCcCCHHHHHHHH
Confidence            5799999999999987766543

Function unknown, but likely to be associated with the glycosylation machinery.

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Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

No hit with e-value below 0.005

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

No hit with probability above 80.00

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Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

No hit with e-value below 0.005

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

No hit with probability above 80.00