BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028302
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|O29445|SERA_ARCFU D-3-phosphoglycerate dehydrogenase OS=Archaeoglobus fulgidus
(strain ATCC 49558 / VC-16 / DSM 4304 / JCM 9628 / NBRC
100126) GN=serA PE=3 SV=1
Length = 527
Score = 74.7 bits (182), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 52/142 (36%), Positives = 77/142 (54%), Gaps = 16/142 (11%)
Query: 46 ISDVPDVIANYHLCVVKTM-RLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVAR 104
I +VP Y VV++ ++D+ I A +K+I + GVG++ +DINAAT+ GI V
Sbjct: 36 IREVP----KYEAIVVRSQTKVDAEVIQAAKNLKIIGRAGVGVDNIDINAATQRGIVVVN 91
Query: 105 IPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFIL 159
PG GN S AE I LML RK + ++ E+KK G L GKT ++
Sbjct: 92 APG---GNTISTAEHAIALMLAAARKIPQADRSVKEGKWERKKF---MGIELRGKTAGVI 145
Query: 160 GFGNIGVELAKRLRPFGVKIIA 181
G G +G E+AKR + + ++A
Sbjct: 146 GLGRVGFEVAKRCKALEMNVLA 167
>sp|A1RYE4|GYAR_THEPD Glyoxylate reductase OS=Thermofilum pendens (strain Hrk 5) GN=gyaR
PE=3 SV=1
Length = 339
Score = 73.6 bits (179), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 73/137 (53%), Gaps = 12/137 (8%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
LC++ T ++D+ + A +K+I + VG + +DI AT+ GI V PG +T + A
Sbjct: 52 LCLL-TDKIDAEVMDAAPNLKVISTYSVGFDHIDIPEATKRGIYVTHTPGVLTD---AVA 107
Query: 118 ELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKR 171
E T+ L+L + R+ E I + P TG L GKT+ ++G G IGV AKR
Sbjct: 108 EFTVGLILAVTRRIVEADKIIRTGQWDKPWNPYFLTGPELKGKTIGLVGLGRIGVATAKR 167
Query: 172 LRPFGVKII--ATKRSW 186
L F VKI+ +R W
Sbjct: 168 LSSFDVKILYYDIERRW 184
>sp|A5GFY8|SERA_PIG D-3-phosphoglycerate dehydrogenase OS=Sus scrofa GN=PHGDH PE=3 SV=1
Length = 533
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 73/128 (57%), Gaps = 11/128 (8%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L V ++ S+ I+ A +++++ + G G++ VD+ AATR GI V P GN+ S A
Sbjct: 51 LIVRSATKVTSDVINAAKKLQVVGRAGTGVDNVDLEAATRKGILVMNTP---NGNSLSAA 107
Query: 118 ELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGFGNIGVELAKRL 172
ELT ++L L R+ + ++ E+KK G L GK + ILG G IG E+A R+
Sbjct: 108 ELTCGMILCLARQIPQATASMKDGKWERKKF---MGTELNGKVLGILGLGRIGREVATRM 164
Query: 173 RPFGVKII 180
+ FG+K I
Sbjct: 165 QSFGMKTI 172
>sp|A5A6P1|SERA_PANTR D-3-phosphoglycerate dehydrogenase OS=Pan troglodytes GN=PHGDH PE=2
SV=1
Length = 533
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 15/139 (10%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR GI V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGF 161
GN+ S AELT +++ L R+ + ++ E+KK G L GKT+ ILG
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF---MGTELNGKTLGILGL 153
Query: 162 GNIGVELAKRLRPFGVKII 180
G IG E+A R++ FG+K I
Sbjct: 154 GRIGREVATRMQSFGMKTI 172
>sp|O43175|SERA_HUMAN D-3-phosphoglycerate dehydrogenase OS=Homo sapiens GN=PHGDH PE=1
SV=4
Length = 533
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 78/139 (56%), Gaps = 15/139 (10%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR GI V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGF 161
GN+ S AELT +++ L R+ + ++ E+KK G L GKT+ ILG
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF---MGTELNGKTLGILGL 153
Query: 162 GNIGVELAKRLRPFGVKII 180
G IG E+A R++ FG+K I
Sbjct: 154 GRIGREVATRMQSFGMKTI 172
>sp|P35136|SERA_BACSU D-3-phosphoglycerate dehydrogenase OS=Bacillus subtilis (strain
168) GN=serA PE=3 SV=3
Length = 525
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/151 (27%), Positives = 81/151 (53%), Gaps = 11/151 (7%)
Query: 37 PSIQVDVVPI-----SDVPDVIANYHLCVVKT-MRLDSNCISRANQMKLIMQFGVGLEGV 90
P I+ D + I +D D + + +V++ ++ + ++ +K++ + GVG++ +
Sbjct: 17 PLIESDFIEIVQKNVADAEDELHTFDALLVRSATKVTEDLFNKMTSLKIVGRAGVGVDNI 76
Query: 91 DINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLG--VPTG 148
DI+ AT+ G+ V P GN S AE T ++ L+R + ++++ ++ G
Sbjct: 77 DIDEATKHGVIVINAP---NGNTISTAEHTFAMISSLMRHIPQANISVKSREWNRTAYVG 133
Query: 149 ETLLGKTVFILGFGNIGVELAKRLRPFGVKI 179
L GKT+ I+G G IG E+A+R R FG+ +
Sbjct: 134 SELYGKTLGIVGLGRIGSEIAQRARAFGMTV 164
>sp|Q60HD7|SERA_MACFA D-3-phosphoglycerate dehydrogenase OS=Macaca fascicularis GN=PHGDH
PE=2 SV=4
Length = 533
Score = 68.6 bits (166), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 78/139 (56%), Gaps = 15/139 (10%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR G+ V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGF 161
GN+ S AELT +++ L R+ + ++ E+KK G L GKT+ ILG
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF---MGTELNGKTLGILGL 153
Query: 162 GNIGVELAKRLRPFGVKII 180
G IG E+A R++ FG+K I
Sbjct: 154 GRIGREVATRMQSFGMKTI 172
>sp|Q5EAD2|SERA_BOVIN D-3-phosphoglycerate dehydrogenase OS=Bos taurus GN=PHGDH PE=2 SV=3
Length = 533
Score = 68.2 bits (165), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 48/139 (34%), Positives = 77/139 (55%), Gaps = 15/139 (10%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ S+ I+ A +++++ + G G++ VD+ AATR GI V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTSDIINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGF 161
GN+ S AELT +++ L R+ + ++ E+KK G L GK + ILG
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQAAASMKDGKWERKKF---MGTELNGKVLGILGL 153
Query: 162 GNIGVELAKRLRPFGVKII 180
G IG E+A R++ FG+K I
Sbjct: 154 GRIGREVATRMQSFGMKTI 172
>sp|O08651|SERA_RAT D-3-phosphoglycerate dehydrogenase OS=Rattus norvegicus GN=Phgdh
PE=1 SV=3
Length = 533
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 44/136 (32%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR G+ V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGVLVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--GETLLGKTVFILGFGNI 164
GN+ S AELT +++ L R+ + +++ K G L GKT+ ILG G I
Sbjct: 100 ---NGNSLSAAELTCGMLMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRI 156
Query: 165 GVELAKRLRPFGVKII 180
G E+A R++ FG+K +
Sbjct: 157 GREVAARMQAFGMKTV 172
>sp|Q61753|SERA_MOUSE D-3-phosphoglycerate dehydrogenase OS=Mus musculus GN=Phgdh PE=1
SV=3
Length = 533
Score = 67.4 bits (163), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 76/136 (55%), Gaps = 9/136 (6%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR GI V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--GETLLGKTVFILGFGNI 164
GN+ S AELT +++ L R+ + +++ K G L GKT+ ILG G I
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQATASMKDGKWDRKKFMGTELNGKTLGILGLGRI 156
Query: 165 GVELAKRLRPFGVKII 180
G E+A R++ FG+K +
Sbjct: 157 GREVATRMQSFGMKTV 172
>sp|B6YWH0|GYAR_THEON Glyoxylate reductase OS=Thermococcus onnurineus (strain NA1)
GN=gyaR PE=3 SV=1
Length = 334
Score = 67.4 bits (163), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 84/171 (49%), Gaps = 17/171 (9%)
Query: 44 VPISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVA 103
V + V DV A L + + R+D+ A ++K++ + VG + +DI AT+ G+ +
Sbjct: 38 VLLEKVRDVDA---LVTMLSERIDAEVFDAAPRLKIVANYAVGYDNIDIEEATKMGVYIT 94
Query: 104 RIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAI---EQKKLGVP------TGETLLGK 154
P DV NA A++ L+L R+ E + E KK GV G + G+
Sbjct: 95 NTP-DVLTNA--TADMAWVLLLATARRLIEADKFVRSGEWKKRGVAWHPLMFLGYDVYGR 151
Query: 155 TVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSGMLGPLSD 205
T+ I+GFG IG +A+R + FG++I+ R+ +V + PL +
Sbjct: 152 TIGIVGFGRIGQAIARRAKGFGMRILYNSRT--RKPEVEKELGAEFMPLDE 200
>sp|Q5JEZ2|GYAR_PYRKO Glyoxylate reductase OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=gyaR PE=3 SV=1
Length = 333
Score = 66.6 bits (161), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 73/148 (49%), Gaps = 9/148 (6%)
Query: 44 VPISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVA 103
V + V DV A L + + R+DS A +++++ + VG + +D+ ATR GI V
Sbjct: 38 VLLKKVRDVDA---LVTMLSERIDSEVFDAAPRLRIVANYAVGYDNIDVEEATRRGIYVT 94
Query: 104 RIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT------GETLLGKTVF 157
P +T A A + L + + + E K+ G+ G + GKT+
Sbjct: 95 NTPDVLTDATADFAWTLLLATARRLIEADHFTRSGEWKRRGIAWHPRWFLGYDVYGKTIG 154
Query: 158 ILGFGNIGVELAKRLRPFGVKIIATKRS 185
I+GFG IG +A+R R FG++I+ RS
Sbjct: 155 IVGFGRIGQAVARRARGFGMRILYYSRS 182
>sp|Q5R7M2|SERA_PONAB D-3-phosphoglycerate dehydrogenase OS=Pongo abelii GN=PHGDH PE=2
SV=3
Length = 533
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/139 (33%), Positives = 77/139 (55%), Gaps = 15/139 (10%)
Query: 51 DVIANYHLC----VVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIP 106
++IA C V ++ ++ I+ A +++++ + G G++ VD+ AATR GI V P
Sbjct: 40 ELIAELQDCEGLIVRSATKVTADVINAAEKLQVVGRAGTGVDNVDLEAATRKGILVMNTP 99
Query: 107 GDVTGNAASCAELTIYLMLGLLRKQNEMRMAI-----EQKKLGVPTGETLLGKTVFILGF 161
GN+ S AELT +++ L R+ + ++ E+KK G L GKT+ ILG
Sbjct: 100 ---NGNSLSAAELTCGMIMCLARQIPQATASMKDGKWERKKF---MGTELNGKTLGILGL 153
Query: 162 GNIGVELAKRLRPFGVKII 180
G IG E+A R++ G+K I
Sbjct: 154 GRIGREVAIRMQSLGMKTI 172
>sp|Q8U3Y2|GYAR_PYRFU Glyoxylate reductase OS=Pyrococcus furiosus (strain ATCC 43587 /
DSM 3638 / JCM 8422 / Vc1) GN=gyaR PE=3 SV=1
Length = 336
Score = 65.1 bits (157), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/169 (29%), Positives = 81/169 (47%), Gaps = 17/169 (10%)
Query: 46 ISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARI 105
+ V DV A L + + R+D A +++++ + VG + +D+ ATR GI V
Sbjct: 40 LEKVKDVDA---LVTMLSERIDQEVFENAPRLRIVANYAVGYDNIDVEEATRRGIYVTNT 96
Query: 106 PGDVTGNAASCAELTIYLMLGLLR---KQNEMRMAIEQKKLGVP------TGETLLGKTV 156
P DV NA A+ L+L R K ++ + E K+ G+ G L GKT+
Sbjct: 97 P-DVLTNA--TADHAFALLLATARHVVKGDKFVRSGEWKRKGIAWHPKWFLGYELYGKTI 153
Query: 157 FILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSGMLGPLSD 205
I+GFG IG +A+R + F ++I+ R+ SQ + PL +
Sbjct: 154 GIVGFGRIGQAIARRAKGFNMRILYYSRT--RKSQAEKELGAEYRPLEE 200
>sp|Q9YAW4|GYAR_AERPE Glyoxylate reductase OS=Aeropyrum pernix (strain ATCC 700893 / DSM
11879 / JCM 9820 / NBRC 100138 / K1) GN=gyaR PE=3 SV=2
Length = 335
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 54/183 (29%), Positives = 85/183 (46%), Gaps = 16/183 (8%)
Query: 12 ITRVLFCGPHFPASHNYTKEYLQNYPSIQVDVVPISDVPDVIANYHLCVVKTMRLDSNCI 71
+TR +F S Y E Y + + +S + A Y L T R+D + +
Sbjct: 8 VTREVFPEALELLSKYYDVEVWDKYQPPPYETL-LSKAREADALYTLL---TDRIDCDLL 63
Query: 72 SRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQ 131
S+A +++++ Q VG + +D+ ATR GI V PG +T + AE T L+L R+
Sbjct: 64 SQAPRLRIVAQMAVGFDNIDVECATRLGIYVTNTPGVLT---EATAEFTWALILAAARRV 120
Query: 132 NEMRMAIEQKKLG---------VPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIAT 182
E + + + G L GKT+ ILG G IG +A+ + FG++II
Sbjct: 121 VEADHFVRWGEWWRLRTGWHPMMMLGVELRGKTLGILGMGRIGSRVAEIGKAFGMRIIYH 180
Query: 183 KRS 185
RS
Sbjct: 181 SRS 183
>sp|Q9C4M5|GYAR_THELI Glyoxylate reductase OS=Thermococcus litoralis GN=gyaR PE=1 SV=1
Length = 331
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 69/134 (51%), Gaps = 6/134 (4%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L + T ++D + A ++K+I Q+ VG + +DI AT+ GI V PG +T A A
Sbjct: 49 LVTLVTDKVDKELLENAPKLKIIAQYAVGYDNIDIEEATKRGIYVTNTPGVLTDATADLA 108
Query: 118 ELTIYLMLGLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKR 171
+ + + + + + E KK V G L GKT+ I+GFG IG LAKR
Sbjct: 109 FALLLAVARRIVEADAFVRSGEWKKSEVGWHPLMFLGYGLKGKTLGIVGFGRIGQALAKR 168
Query: 172 LRPFGVKIIATKRS 185
+ FG+KII R+
Sbjct: 169 AKGFGMKIIYYSRT 182
>sp|Q58424|SERA_METJA D-3-phosphoglycerate dehydrogenase OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=serA PE=3 SV=1
Length = 524
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 53 IANYHLCVVKT-MRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTG 111
I + + VV++ ++ + I +A ++K+I + GVG++ +D+ AAT GI V P
Sbjct: 39 IKDADVLVVRSGTKVTRDVIEKAEKLKVIGRAGVGVDNIDVEAATEKGIIVVNAP---DA 95
Query: 112 NAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELA 169
++ S AELT+ LML R + ++++ + G L GKT+ ++G G IG ++
Sbjct: 96 SSISVAELTMGLMLAAARNIPQATASLKRGEWDRKRFKGIELYGKTLGVIGLGRIGQQVV 155
Query: 170 KRLRPFGVKII 180
KR + FG+ II
Sbjct: 156 KRAKAFGMNII 166
>sp|O27051|SERA_METTH D-3-phosphoglycerate dehydrogenase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=serA PE=3 SV=1
Length = 525
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 51 DVIANYHLCVVKT-MRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDV 109
D I ++ VV++ ++ I A ++K+I + GVG++ VD+ AAT GI V P
Sbjct: 39 DAIKDFDAIVVRSRTKVTREVIEAAPRLKIIARAGVGVDNVDVKAATDRGIMVINAP--- 95
Query: 110 TGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVE 167
+ + AE +I LML L RK ++++ K G L GKT+ I+G G IG +
Sbjct: 96 ESTSITVAEHSIGLMLALARKIAIADRSVKEGKWEKNRFMGIELNGKTLGIIGMGRIGSQ 155
Query: 168 LAKRLRPFGVKII 180
+ R + FG+ I+
Sbjct: 156 VVVRTKAFGMDIM 168
>sp|P73821|SERA_SYNY3 D-3-phosphoglycerate dehydrogenase OS=Synechocystis sp. (strain PCC
6803 / Kazusa) GN=serA PE=3 SV=1
Length = 554
Score = 59.7 bits (143), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 83/163 (50%), Gaps = 11/163 (6%)
Query: 40 QVDV---VPISDVPDVIANYHLCVVKT-MRLDSNCISRANQMKLIMQFGVGLEGVDINAA 95
QVDV + +++ D++ Y ++++ ++ I +Q+K+I + GVG++ +D+ AA
Sbjct: 51 QVDVKTGLSEAEIIDIVPEYDAIMLRSATKVTEKIIQAGSQLKIIGRAGVGVDNIDVPAA 110
Query: 96 TRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLG 153
TR GI V P GN + AE + +M+ L R + ++++ K G +
Sbjct: 111 TRQGIVVVNSP---EGNTIAAAEHALAMMMALARHIPDANKSVKESKWERKQFIGTEVYK 167
Query: 154 KTVFILGFGNIGVELAKRLRPFGVKIIATKR--SWASHSQVSC 194
KT+ ++G G IG +A + G+K++A S Q+ C
Sbjct: 168 KTLGVVGLGKIGSHVAGVAKAMGMKLLAYDPFISQERADQIGC 210
>sp|O04130|SERA_ARATH D-3-phosphoglycerate dehydrogenase, chloroplastic OS=Arabidopsis
thaliana GN=At1g17745 PE=1 SV=2
Length = 624
Score = 59.7 bits (143), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 61/108 (56%), Gaps = 5/108 (4%)
Query: 76 QMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMR 135
++K++ + GVG++ VD+ AAT G V P T N + AE I L+ + R +
Sbjct: 145 RLKVVGRAGVGIDNVDLQAATEHGCLVVNAP---TANTVAAAEHGIALLASMARNVAQAD 201
Query: 136 MAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIA 181
+I+ K G +L+GKT+ ++GFG +G E+A+R + G+ +I+
Sbjct: 202 ASIKAGKWERSKYVGVSLVGKTLAVMGFGKVGTEVARRAKGLGMTVIS 249
>sp|P36234|DHGY_HYPME Glycerate dehydrogenase OS=Hyphomicrobium methylovorum PE=1 SV=2
Length = 322
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/173 (30%), Positives = 81/173 (46%), Gaps = 21/173 (12%)
Query: 42 DVVPISDVPDVIANYHLCVVKT-----MRLDSNC----ISR-ANQMKLIMQFGVGLEGVD 91
DV+ D P + + + K+ + L+ C I R +K I + +G + +D
Sbjct: 25 DVIAHGDDPKITIDEMIETAKSVDALLITLNEKCRKEVIDRIPENIKCISTYSIGFDHID 84
Query: 92 INAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKL--GVP--- 146
++A GIKV P VT + AE+ + L+LG R+ E I + P
Sbjct: 85 LDACKARGIKVGNAPHGVT---VATAEIAMLLLLGSARRAGEGEKMIRTRSWPGWEPLEL 141
Query: 147 TGETLLGKTVFILGFGNIGVELAKRLRPFGVKI--IATKRSWASHSQVSCQSS 197
GE L KT+ I GFG+IG LAKR + F + I T R+ +S + S Q++
Sbjct: 142 VGEKLDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRA-SSSDEASYQAT 193
>sp|O33116|SERA_MYCLE D-3-phosphoglycerate dehydrogenase OS=Mycobacterium leprae (strain
TN) GN=serA PE=3 SV=1
Length = 528
Score = 55.1 bits (131), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 67/126 (53%), Gaps = 5/126 (3%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L V +D+ ++ A ++K++ + GVGL+ VD++AAT G+ V P T N S A
Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAA 103
Query: 118 ELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPF 175
E + L+L R+ E ++ K +G + GKTV ++G G IG +A R+ F
Sbjct: 104 EHALALLLAASRQIAEADASLRAHIWKRSSFSGTEIFGKTVGVVGLGRIGQLVAARIAAF 163
Query: 176 GVKIIA 181
G +IA
Sbjct: 164 GAHVIA 169
>sp|B1L765|GYAR_KORCO Glyoxylate reductase OS=Korarchaeum cryptofilum (strain OPF8)
GN=gyaR PE=3 SV=1
Length = 332
Score = 54.3 bits (129), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/121 (27%), Positives = 63/121 (52%), Gaps = 9/121 (7%)
Query: 66 LDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLML 125
+D+ A +++++ Q+ VG + +D+ AT+ GI V PG +T + A+ L++
Sbjct: 57 IDAEVFEAAPKLRIVAQYAVGYDNIDVKEATKRGIYVTNTPGVLT---ETTADFAFALLM 113
Query: 126 GLLRKQNEMRMAIEQKKLGVP------TGETLLGKTVFILGFGNIGVELAKRLRPFGVKI 179
R+ E + + K V G + G+T+ I+G G IG +A+R + FG++I
Sbjct: 114 AAARRVVEADRYVREGKWKVAWHPMMMLGYDVYGRTLGIVGMGRIGAAVARRAKGFGMRI 173
Query: 180 I 180
+
Sbjct: 174 L 174
>sp|Q91Z53|GRHPR_MOUSE Glyoxylate reductase/hydroxypyruvate reductase OS=Mus musculus
GN=Grhpr PE=1 SV=1
Length = 328
Score = 53.9 bits (128), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 46/148 (31%), Positives = 74/148 (50%), Gaps = 18/148 (12%)
Query: 42 DVVPISDVPDVIANYH--LCVVKTMRLDSNCISRAN-QMKLIMQFGVGLEGVDINAATRC 98
D +P D+ + H LC + R+D + A +++I VG++ + ++ +
Sbjct: 38 DPIPRKDLEQGVVGAHGLLCRLSD-RVDKKLLDAAGANLRVISTLSVGVDHLALDEIKKR 96
Query: 99 GIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--------GET 150
GI+V PG +T + AEL + L+L R+ E AIE+ K G + G
Sbjct: 97 GIRVGYTPGVLTD---ATAELAVSLLLTTCRRLPE---AIEEVKNGGWSSWSPLWMCGYG 150
Query: 151 LLGKTVFILGFGNIGVELAKRLRPFGVK 178
L TV I+G G IG +A+RL+PFGV+
Sbjct: 151 LSQSTVGIVGLGRIGQAIARRLKPFGVQ 178
>sp|P0A544|SERA_MYCTU D-3-phosphoglycerate dehydrogenase OS=Mycobacterium tuberculosis
GN=serA PE=1 SV=1
Length = 528
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L V +D+ ++ A ++K++ + GVGL+ VD++AAT G+ V P T N S A
Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAA 103
Query: 118 ELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPF 175
E + L+L R+ ++ + K +G + GKTV ++G G IG +A+R+ F
Sbjct: 104 EHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF 163
Query: 176 GVKIIA 181
G ++A
Sbjct: 164 GAYVVA 169
>sp|P0A545|SERA_MYCBO D-3-phosphoglycerate dehydrogenase OS=Mycobacterium bovis (strain
ATCC BAA-935 / AF2122/97) GN=serA PE=3 SV=1
Length = 528
Score = 53.5 bits (127), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 68/126 (53%), Gaps = 5/126 (3%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L V +D+ ++ A ++K++ + GVGL+ VD++AAT G+ V P T N S A
Sbjct: 47 LLVRSATTVDAEVLAAAPKLKIVARAGVGLDNVDVDAATARGVLVVNAP---TSNIHSAA 103
Query: 118 ELTIYLMLGLLRKQNEMRMAIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPF 175
E + L+L R+ ++ + K +G + GKTV ++G G IG +A+R+ F
Sbjct: 104 EHALALLLAASRQIPAADASLREHTWKRSSFSGTEIFGKTVGVVGLGRIGQLVAQRIAAF 163
Query: 176 GVKIIA 181
G ++A
Sbjct: 164 GAYVVA 169
>sp|P53839|GOR1_YEAST Glyoxylate reductase 1 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=GOR1 PE=1 SV=1
Length = 350
Score = 52.4 bits (124), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 46/163 (28%), Positives = 71/163 (43%), Gaps = 23/163 (14%)
Query: 52 VIANYHLCVVKTMRLDSN-CISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVT 110
VI V T R D ++ + + + G G + +D+ + I+VA +P D+
Sbjct: 57 VITRTARSVKNTGRFDEELALALPSSVVAVCHTGAGYDQIDVEPFKKRHIQVANVP-DLV 115
Query: 111 GNAASCAELTIYLMLGLLRKQNEMRMAIEQKKL------------GVPTGETLLGKTVFI 158
NA A+ ++L+LG LR I ++L G P G GKTV I
Sbjct: 116 SNA--TADTHVFLLLGALRN-----FGIGNRRLIEGNWPEAGPACGSPFGYDPEGKTVGI 168
Query: 159 LGFGNIGVELAKRLRPFGVK--IIATKRSWASHSQVSCQSSGM 199
LG G IG + +RL+PFG + I + S + C+ G
Sbjct: 169 LGLGRIGRCILERLKPFGFENFIYHNRHQLPSEEEHGCEYVGF 211
>sp|P52643|LDHD_ECOLI D-lactate dehydrogenase OS=Escherichia coli (strain K12) GN=ldhA
PE=1 SV=1
Length = 329
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 52/98 (53%), Gaps = 5/98 (5%)
Query: 86 GLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGV 145
G VD++AA G+KV R+P + + AE I +M+ L R+ + +
Sbjct: 78 GFNNVDLDAAKELGLKVVRVPA---YDPEAVAEHAIGMMMTLNRRIHRAYQRTRDANFSL 134
Query: 146 P--TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIA 181
TG T+ GKT ++G G IGV + + L+ FG++++A
Sbjct: 135 EGLTGFTMYGKTAGVIGTGKIGVAMLRILKGFGMRLLA 172
>sp|Q9UBQ7|GRHPR_HUMAN Glyoxylate reductase/hydroxypyruvate reductase OS=Homo sapiens
GN=GRHPR PE=1 SV=1
Length = 328
Score = 51.6 bits (122), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 73/146 (50%), Gaps = 18/146 (12%)
Query: 44 VPISDVPDVIANYH--LCVVKTMRLDSNCISRAN-QMKLIMQFGVGLEGVDINAATRCGI 100
+P ++ +A H LC++ +D + A +K+I VG++ + ++ + GI
Sbjct: 40 IPAKELERGVAGAHGLLCLLSD-HVDKRILDAAGANLKVISTMSVGIDHLALDEIKKRGI 98
Query: 101 KVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT--------GETLL 152
+V P +T + AEL + L+L R+ E AIE+ K G T G L
Sbjct: 99 RVGYTPDVLTD---TTAELAVSLLLTTCRRLPE---AIEEVKNGGWTSWKPLWLCGYGLT 152
Query: 153 GKTVFILGFGNIGVELAKRLRPFGVK 178
TV I+G G IG +A+RL+PFGV+
Sbjct: 153 QSTVGIIGLGRIGQAIARRLKPFGVQ 178
>sp|Q9P7P8|DDH1_SCHPO 2-hydroxyacid dehydrogenase homolog 1 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=SPAC186.07c PE=3 SV=1
Length = 332
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 42/129 (32%), Positives = 65/129 (50%), Gaps = 8/129 (6%)
Query: 58 LCVVKTMRLDSNCIS--RANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAAS 115
+CV ++D++ + N KLI G VD+ AA GI V R+P + +
Sbjct: 48 VCVFVNDKVDADTLKVLAKNGTKLIALRCAGFNNVDLKAAADNGITVVRVPA---YSPYA 104
Query: 116 CAELTIYLMLGLLRKQNEMRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELAKRLR 173
AE TI L+L L RK + + + + + G L GKT+ +LG G IG +AK L+
Sbjct: 105 VAEYTIGLLLSLNRKIHRAYVRVREDDFNLNGLLGHDLHGKTIGLLGTGRIGGLVAKCLK 164
Query: 174 -PFGVKIIA 181
FG +++A
Sbjct: 165 LGFGCEVLA 173
>sp|Q47748|VANH_ENTFA D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecalis
(strain ATCC 700802 / V583) GN=vanHB PE=3 SV=2
Length = 323
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 55/111 (49%), Gaps = 6/111 (5%)
Query: 77 MKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRM 136
+K I +G +D AA R GI V G V + S A+ + LML +R
Sbjct: 73 VKYISTRSIGCNHIDTTAAERMGISV----GTVAYSPDSVADYALMLMLMAIRGAKSTIH 128
Query: 137 AIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRS 185
A+ Q+ +L G+ L TV ++G G+IG + KRLR FG +++A S
Sbjct: 129 AVAQQNFRLDCVRGKELRDMTVGVIGTGHIGQAVVKRLRGFGCRVLAYDNS 179
>sp|Q05709|VANH_ENTFC D-specific alpha-keto acid dehydrogenase OS=Enterococcus faecium
GN=vanH PE=1 SV=1
Length = 322
Score = 50.8 bits (120), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 58/113 (51%), Gaps = 6/113 (5%)
Query: 77 MKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRM 136
+K I +G +D AA R GI V +V + S A+ T+ L+L +R +
Sbjct: 72 VKYISTRSIGCNHIDTTAAKRMGITV----DNVAYSPDSVADYTMMLILMAVRNVKSIVR 127
Query: 137 AIEQK--KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRSWA 187
++E+ +L G+ L TV ++G G IG + +RLR FG K++A RS +
Sbjct: 128 SVEKHDFRLDSDRGKVLSDMTVGVVGTGQIGKAVIERLRGFGCKVLAYSRSRS 180
>sp|P56546|CTBP2_MOUSE C-terminal-binding protein 2 OS=Mus musculus GN=Ctbp2 PE=1 SV=2
Length = 445
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + VDI AA GI V IP + T ++ C L
Sbjct: 84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHIL 143
Query: 120 TIY----LMLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPF 175
+Y + LR+ ++ ++EQ + + G+T+ ++GFG G +A R + F
Sbjct: 144 NLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAF 202
Query: 176 GVKII 180
G +I
Sbjct: 203 GFSVI 207
>sp|Q9EQH5|CTBP2_RAT C-terminal-binding protein 2 OS=Rattus norvegicus GN=Ctbp2 PE=1
SV=2
Length = 445
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 62/125 (49%), Gaps = 8/125 (6%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + VDI AA GI V IP + T ++ C L
Sbjct: 84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIPSAAVEETADSTVCHIL 143
Query: 120 TIY----LMLGLLRKQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPF 175
+Y + LR+ ++ ++EQ + + G+T+ ++GFG G +A R + F
Sbjct: 144 NLYRRNTWLYQALREGTRVQ-SVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAKAF 202
Query: 176 GVKII 180
G +I
Sbjct: 203 GFSVI 207
>sp|P56545|CTBP2_HUMAN C-terminal-binding protein 2 OS=Homo sapiens GN=CTBP2 PE=1 SV=1
Length = 445
Score = 50.8 bits (120), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIY 122
T+ L + + +++I++ G G + VDI AA GI V IP + A+ TI
Sbjct: 84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIP---SAAVEETADSTIC 140
Query: 123 LMLGLLRKQNEMRMA---------IEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLR 173
+L L R+ + A +EQ + + G+T+ ++GFG G +A R +
Sbjct: 141 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK 200
Query: 174 PFGVKII 180
FG +I
Sbjct: 201 AFGFSVI 207
>sp|Q9UYR1|GYAR_PYRAB Glyoxylate reductase OS=Pyrococcus abyssi (strain GE5 / Orsay)
GN=gyaR PE=3 SV=1
Length = 335
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 80/166 (48%), Gaps = 11/166 (6%)
Query: 46 ISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARI 105
+ V DV A L + + R+D RA +++++ + VG + +D+ AT+ GI V
Sbjct: 41 LEKVKDVDA---LVTMLSERIDREVFERAPRLRIVANYAVGYDNIDVEEATKRGIYVTNT 97
Query: 106 PGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT------GETLLGKTVFIL 159
PG +T A A + L K ++ + E KK GV G + GKT+ I+
Sbjct: 98 PGVLTDATADLAFALLLATARHLVKGDKFTRSGEWKKRGVAWHPKWFLGYDVYGKTIGII 157
Query: 160 GFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSGMLGPLSD 205
GFG IG +AKR R F ++I+ R+ +V + + PL +
Sbjct: 158 GFGRIGQAIAKRARGFDMRILYYSRT--RKPEVEKELNAEFKPLDE 201
>sp|Q0VCQ1|CTBP2_BOVIN C-terminal-binding protein 2 OS=Bos taurus GN=CTBP2 PE=1 SV=1
Length = 445
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/127 (26%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIY 122
T+ L + + +++I++ G G + VDI AA GI V IP + A+ TI
Sbjct: 84 TITLTREDLEKFKALRVIVRIGSGYDNVDIKAAGELGIAVCNIP---SAAVEETADSTIC 140
Query: 123 LMLGLLRKQNEMRMA---------IEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLR 173
+L L R+ + A +EQ + + G+T+ ++GFG G +A R +
Sbjct: 141 HILNLYRRNTWLYQALREGTRVQSVEQIREVASGAARIRGETLGLIGFGRTGQAVAVRAK 200
Query: 174 PFGVKII 180
FG ++
Sbjct: 201 AFGFSVL 207
>sp|Q9W758|CTBP2_XENLA C-terminal-binding protein 2 OS=Xenopus laevis GN=ctbp2 PE=1 SV=1
Length = 437
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/124 (25%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + +DI +A GI V IP + T ++ C L
Sbjct: 81 TITLSREDLEKFKALRIIIKIGSGYDNIDIKSAAELGIAVCNIPSASVEETADSTLCHIL 140
Query: 120 TIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFG 176
+Y + L ++ ++EQ + + G+T+ I+G G IG +A R + F
Sbjct: 141 NLYRRVTWLHQAMREGNRPASVEQIREVAGGAARIRGETLGIIGLGRIGQAVALRAKAFN 200
Query: 177 VKII 180
+I
Sbjct: 201 FTVI 204
>sp|P44501|DDH_HAEIN 2-hydroxyacid dehydrogenase homolog OS=Haemophilus influenzae
(strain ATCC 51907 / DSM 11121 / KW20 / Rd) GN=ddh PE=3
SV=1
Length = 331
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 51/98 (52%), Gaps = 5/98 (5%)
Query: 86 GLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGV 145
G VD+ AA GI+V R+P + + AE TI LM+ L R+ + + +
Sbjct: 78 GFNNVDLKAAQELGIQVVRVPA---YSPEAVAEHTIGLMMTLNRRIHRAYQRTREANFSL 134
Query: 146 P--TGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIA 181
G + G+TV ++G G IG+ + + L+ FG+ I+A
Sbjct: 135 EGLIGFNMYGRTVGVIGTGKIGIAVMRILKGFGMNILA 172
>sp|Q54UF7|LDHD_DICDI Putative D-lactate dehydrogenase OS=Dictyostelium discoideum
GN=ldhA PE=1 SV=1
Length = 340
Score = 48.9 bits (115), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 57/111 (51%), Gaps = 6/111 (5%)
Query: 74 ANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRKQNE 133
+N K+I+ G VD++ A + GI V R+P + NA S E + L++ L RK ++
Sbjct: 65 SNGTKVILMRCAGFNKVDLDTANKLGIPVLRVPA-YSPNAVS--EYALSLIMALNRKTHK 121
Query: 134 MRMAIEQKKLGVP--TGETLLGKTVFILGFGNIGVELAKRLR-PFGVKIIA 181
+ + G ++ K I+G GNIG +L + L+ FG K+IA
Sbjct: 122 AHDRVRDANFEINGMEGFNMVSKVYGIVGTGNIGEQLCRVLKLGFGAKVIA 172
>sp|C5A1V0|GYAR_THEGJ Glyoxylate reductase OS=Thermococcus gammatolerans (strain DSM
15229 / JCM 11827 / EJ3) GN=gyaR PE=3 SV=1
Length = 334
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 49/171 (28%), Positives = 83/171 (48%), Gaps = 17/171 (9%)
Query: 44 VPISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVA 103
V + V DV A L + + R+D A +++++ + VG + VD+ ATR GI V
Sbjct: 38 VLLEKVRDVDA---LVTMLSERIDGEVFDNAPRLRIVANYAVGYDNVDVEEATRRGIYVT 94
Query: 104 RIPGDVTGNAASCAELTIYLMLGLLRK---QNEMRMAIEQKKLGVPT------GETLLGK 154
P DV NA A+ L+L R+ + + E K+ G+ G + GK
Sbjct: 95 NTP-DVLTNA--TADFAWTLLLATARRLIEADSFTRSGEWKRKGIAWHPLMFLGHDVYGK 151
Query: 155 TVFILGFGNIGVELAKRLRPFGVKIIATKRSWASHSQVSCQSSGMLGPLSD 205
T+ I+GFG IG +A+R + FG++I+ R+ ++ ++ PL +
Sbjct: 152 TIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEAEEELKAE--FKPLEE 200
>sp|O46036|CTBP_DROME C-terminal-binding protein OS=Drosophila melanogaster GN=CtBP PE=1
SV=3
Length = 476
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 59/127 (46%), Gaps = 12/127 (9%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIY 122
T+ L + + +++I++ G G + +D+ AA GI V +PG A+ T+
Sbjct: 78 TIILTKEDLEKFKALRIIVRIGSGTDNIDVKAAGELGIAVCNVPG---YGVEEVADTTMC 134
Query: 123 LMLGLLRKQNEM-RMAIEQKKLGVPTG--------ETLLGKTVFILGFGNIGVELAKRLR 173
L+L L R+ + M E KK P + G T+ ++G G IG +A R +
Sbjct: 135 LILNLYRRTYWLANMVREGKKFTGPEQVREAAHGCARIRGDTLGLVGLGRIGSAVALRAK 194
Query: 174 PFGVKII 180
FG +I
Sbjct: 195 AFGFNVI 201
>sp|O94574|YGDH_SCHPO Putative 2-hydroxyacid dehydrogenase C1773.17c
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=SPBC1773.17c PE=3 SV=3
Length = 340
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 53/110 (48%), Gaps = 5/110 (4%)
Query: 78 KLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLR--KQNEMR 135
KL + G VD++ ATR G+ VA P G A + + L + LR ++ E
Sbjct: 85 KLFVTGAAGYNNVDVDWATRNGVYVANTP---NGPTEGTANMNLMLFMCTLRGAREAEQS 141
Query: 136 MAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIATKRS 185
+ + + + + + GK V I+G G IG A+++ P G +I+ R+
Sbjct: 142 LRLGKWRQNLSLTDDPYGKRVGIIGMGAIGKSFAQKILPLGCEIVYHNRN 191
>sp|Q59642|LDHD_PEDAC D-lactate dehydrogenase OS=Pediococcus acidilactici GN=ldhD PE=3
SV=1
Length = 331
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 84 GVGLEGVDINAATRCGIKVARIPGDVTGNAASCAELTIYLMLGLLRK--QNEMRMAIEQK 141
VGL+ V +A + IK++ +P + + AEL++ +L LLRK + E +MA
Sbjct: 76 NVGLDNVPADALKKNDIKISNVPA---YSPRAIAELSVTQLLALLRKIPEFEYKMAHGDY 132
Query: 142 KLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFGVKIIA 181
+ G L TV ++G G IG +PFG K+IA
Sbjct: 133 RWEPDIGLELNQMTVGVIGTGRIGRAAIDIFKPFGAKVIA 172
>sp|O88712|CTBP1_MOUSE C-terminal-binding protein 1 OS=Mus musculus GN=Ctbp1 PE=1 SV=2
Length = 441
Score = 48.1 bits (113), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + +DI +A GI V +P + T ++ C L
Sbjct: 78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHIL 137
Query: 120 TIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFG 176
+Y L ++ ++EQ + + G+T+ I+G G +G +A R + FG
Sbjct: 138 NLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFG 197
Query: 177 VKII 180
++
Sbjct: 198 FNVL 201
>sp|Q9Z2F5|CTBP1_RAT C-terminal-binding protein 1 OS=Rattus norvegicus GN=Ctbp1 PE=1
SV=3
Length = 430
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + +DI +A GI V +P + T ++ C L
Sbjct: 67 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHIL 126
Query: 120 TIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFG 176
+Y L ++ ++EQ + + G+T+ I+G G +G +A R + FG
Sbjct: 127 NLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFG 186
Query: 177 VKII 180
++
Sbjct: 187 FNVL 190
>sp|Q13363|CTBP1_HUMAN C-terminal-binding protein 1 OS=Homo sapiens GN=CTBP1 PE=1 SV=2
Length = 440
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 59/124 (47%), Gaps = 6/124 (4%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + +DI +A GI V +P + T ++ C L
Sbjct: 78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTLCHIL 137
Query: 120 TIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFG 176
+Y L ++ ++EQ + + G+T+ I+G G +G +A R + FG
Sbjct: 138 NLYRRATWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKAFG 197
Query: 177 VKII 180
++
Sbjct: 198 FNVL 201
>sp|O13437|FDH_CANBO Formate dehydrogenase OS=Candida boidinii GN=FDH1 PE=1 SV=1
Length = 364
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 66/140 (47%), Gaps = 13/140 (9%)
Query: 44 VPISDVPDVIANYHLCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVA 103
+P +D+ + +H + RLD +A +KL++ GVG + +D++ + G K++
Sbjct: 58 IPDADII-ITTPFHPAYITKERLD-----KAKNLKLVVVAGVGSDHIDLDYINQTGKKIS 111
Query: 104 RIPGDVTG-NAASCAELTIYLMLGLLRKQNEMRMAIEQKKLGVPT----GETLLGKTVFI 158
+ +VTG N S AE + ML L+R I V + GKT+
Sbjct: 112 VL--EVTGSNVVSVAEHVVMTMLVLVRNFVPAHEQIINHDWEVAAIAKDAYDIEGKTIAT 169
Query: 159 LGFGNIGVELAKRLRPFGVK 178
+G G IG + +RL PF K
Sbjct: 170 IGAGRIGYRVLERLLPFNPK 189
>sp|Q9YHU0|CTBP1_XENLA C-terminal-binding protein 1 OS=Xenopus laevis GN=ctbp1 PE=2 SV=1
Length = 440
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/124 (23%), Positives = 58/124 (46%), Gaps = 6/124 (4%)
Query: 63 TMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPG---DVTGNAASCAEL 119
T+ L + + +++I++ G G + +DI +A GI V +P + T ++ C L
Sbjct: 78 TITLTREDLEKFKALRIIVRIGSGFDNIDIKSAGDLGIAVCNVPAASVEETADSTMCHIL 137
Query: 120 TIYLMLGLLR---KQNEMRMAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKRLRPFG 176
+Y L ++ ++EQ + + G+T+ I+G G +G +A R + FG
Sbjct: 138 NLYRRTTWLHQALREGTRVQSVEQIREVASGAARIRGETLGIIGLGRVGQAVALRAKTFG 197
Query: 177 VKII 180
+
Sbjct: 198 FNVF 201
>sp|Q1QWN6|SLCC_CHRSD (S)-sulfolactate dehydrogenase OS=Chromohalobacter salexigens
(strain DSM 3043 / ATCC BAA-138 / NCIMB 13768) GN=slcC
PE=1 SV=1
Length = 309
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 38/130 (29%), Positives = 67/130 (51%), Gaps = 13/130 (10%)
Query: 58 LCVVKTMRLDSNCISRANQMKLIMQFGVGLEGVDINAATRCGIKVARIPGDVTGNAASCA 117
L V R+D ++R ++ + + GVGL+ +D++A I V G GN S A
Sbjct: 47 LIVRNRTRVDRELLARFPDLRAVGRLGVGLDNIDVDACRESDIAVLPATG---GNTVSVA 103
Query: 118 ELTIYLMLG--LLRKQNEMR----MAIEQKKLGVPTGETLLGKTVFILGFGNIGVELAKR 171
E Y++ G +LR+ + +A E + + ET G T+ ++GFG I +LA+R
Sbjct: 104 E---YVLTGIFMLRRGAYLSTPRVLAGEWPRQALMGHET-QGATLGLVGFGGIARDLARR 159
Query: 172 LRPFGVKIIA 181
+ G++++A
Sbjct: 160 AQCLGMQVMA 169
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.136 0.404
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,473,869
Number of Sequences: 539616
Number of extensions: 2961895
Number of successful extensions: 10014
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 194
Number of HSP's successfully gapped in prelim test: 200
Number of HSP's that attempted gapping in prelim test: 9713
Number of HSP's gapped (non-prelim): 399
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 58 (26.9 bits)