Your job contains 1 sequence.
>028305
MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL
VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE
ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA
LKNEHKDIYYQPQGISETVSEVEQRGGCAC
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= 028305
(210 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
TAIR|locus:2199716 - symbol:RABG3B "RAB GTPase homolog G... 794 5.4e-79 1
TAIR|locus:2052479 - symbol:RAB7A "RAB GTPase homolog 7A"... 763 1.0e-75 1
TAIR|locus:2118500 - symbol:RABG3A "RAB GTPase homolog G3... 759 2.7e-75 1
TAIR|locus:2093437 - symbol:RABG3c "RAB GTPase homolog G3... 727 6.7e-72 1
TAIR|locus:2018124 - symbol:RABG3d "RAB GTPase homolog G3... 726 8.6e-72 1
TAIR|locus:2094029 - symbol:RAB7B "RAB GTPase homolog G3F... 725 1.1e-71 1
TAIR|locus:2010257 - symbol:RABG3E "RAB GTPase homolog G... 723 1.8e-71 1
DICTYBASE|DDB_G0269236 - symbol:rab7A "Rab GTPase" specie... 653 4.7e-64 1
ASPGD|ASPL0000062908 - symbol:avaA species:162425 "Emeric... 641 8.8e-63 1
ZFIN|ZDB-GENE-040704-16 - symbol:zgc:91909 "zgc:91909" sp... 636 3.0e-62 1
POMBASE|SPBC405.04c - symbol:ypt7 "GTPase Ypt7" species:4... 631 1.0e-61 1
ZFIN|ZDB-GENE-040927-2 - symbol:zgc:100918 "zgc:100918" s... 630 1.3e-61 1
UNIPROTKB|F1MJQ1 - symbol:RAB7A "Ras-related protein Rab-... 617 3.1e-60 1
RGD|61908 - symbol:Rab7a "RAB7A, member RAS oncogene fami... 615 5.0e-60 1
UNIPROTKB|E1C0F3 - symbol:RAB7A "Uncharacterized protein"... 613 8.1e-60 1
UNIPROTKB|Q3T0F5 - symbol:RAB7A "Ras-related protein Rab-... 613 8.1e-60 1
UNIPROTKB|P18067 - symbol:RAB7A "Ras-related protein Rab-... 612 1.0e-59 1
UNIPROTKB|P51149 - symbol:RAB7A "Ras-related protein Rab-... 612 1.0e-59 1
MGI|MGI:105068 - symbol:Rab7 "RAB7, member RAS oncogene f... 612 1.0e-59 1
ZFIN|ZDB-GENE-040426-1352 - symbol:rab7 "RAB7, member RAS... 612 1.0e-59 1
UNIPROTKB|Q5R9Y4 - symbol:RAB7A "Ras-related protein Rab-... 611 1.3e-59 1
WB|WBGene00004271 - symbol:rab-7 species:6239 "Caenorhabd... 602 1.2e-58 1
UNIPROTKB|O97572 - symbol:RAB7A "Ras-related protein Rab-... 591 1.7e-57 1
UNIPROTKB|Q95UJ0 - symbol:Rab7a "Ras-related protein Rab-... 591 1.7e-57 1
UNIPROTKB|Q6DUB4 - symbol:Rab7b "Ras-related protein Rab-... 589 2.8e-57 1
FB|FBgn0015795 - symbol:Rab7 "Rab7" species:7227 "Drosoph... 575 8.6e-56 1
POMBASE|SPAPB1A10.10c - symbol:ypt71 "GTPase Ypt71" speci... 553 1.9e-53 1
SGD|S000004460 - symbol:YPT7 "Rab family GTPase" species:... 552 2.4e-53 1
TAIR|locus:2164905 - symbol:RABG1 "RAB GTPase homolog G1"... 540 4.4e-52 1
UNIPROTKB|C9J592 - symbol:RAB7A "Ras-related protein Rab-... 528 8.3e-51 1
CGD|CAL0006268 - symbol:YPT72 species:5476 "Candida albic... 507 1.4e-48 1
UNIPROTKB|Q59ZB7 - symbol:YPT7 "Likely rab family GTP-bin... 507 1.4e-48 1
UNIPROTKB|Q5ZMI5 - symbol:RAB9A "Uncharacterized protein"... 483 4.8e-46 1
RGD|1562951 - symbol:Rab9b "RAB9B, member RAS oncogene fa... 475 3.4e-45 1
UNIPROTKB|E1BVF5 - symbol:RAB9B "Uncharacterized protein"... 473 5.6e-45 1
ZFIN|ZDB-GENE-060825-293 - symbol:rab9a "RAB9A, member RA... 473 5.6e-45 1
UNIPROTKB|P24408 - symbol:RAB9A "Ras-related protein Rab-... 472 7.1e-45 1
MGI|MGI:2442454 - symbol:Rab9b "RAB9B, member RAS oncogen... 472 7.1e-45 1
UNIPROTKB|Q0VCB4 - symbol:RAB9B "Uncharacterized protein"... 471 9.1e-45 1
UNIPROTKB|F1SRI1 - symbol:RAB9A "Uncharacterized protein"... 471 9.1e-45 1
UNIPROTKB|E2RBU0 - symbol:RAB9B "Uncharacterized protein"... 470 1.2e-44 1
UNIPROTKB|Q9NP90 - symbol:RAB9B "Ras-related protein Rab-... 470 1.2e-44 1
UNIPROTKB|F1RYC4 - symbol:LOC100525674 "Uncharacterized p... 470 1.2e-44 1
UNIPROTKB|Q5R4W9 - symbol:RAB9B "Ras-related protein Rab-... 470 1.2e-44 1
UNIPROTKB|P51151 - symbol:RAB9A "Ras-related protein Rab-... 469 1.5e-44 1
UNIPROTKB|K7GKQ1 - symbol:RAB9A "Uncharacterized protein"... 469 1.5e-44 1
UNIPROTKB|Q08DW1 - symbol:RAB9A "RAB9A, member RAS oncoge... 468 1.9e-44 1
RGD|619740 - symbol:Rab9a "RAB9A, member RAS oncogene fam... 463 6.4e-44 1
UNIPROTKB|Q99P75 - symbol:Rab9a "Ras-related protein Rab-... 463 6.4e-44 1
MGI|MGI:1890695 - symbol:Rab9 "RAB9, member RAS oncogene ... 462 8.1e-44 1
UNIPROTKB|K7GPC9 - symbol:RAB9A "Uncharacterized protein"... 459 1.7e-43 1
ZFIN|ZDB-GENE-091118-112 - symbol:rab9b "RAB9B, member RA... 454 5.7e-43 1
ZFIN|ZDB-GENE-040724-163 - symbol:si:dkey-13a21.4 "si:dke... 453 7.3e-43 1
UNIPROTKB|C9IZZ0 - symbol:RAB7A "Ras-related protein Rab-... 388 1.4e-42 2
RGD|1562617 - symbol:Rab7b "Rab7b, member RAS oncogene fa... 415 7.8e-39 1
UNIPROTKB|I3LRC7 - symbol:LOC100627693 "Uncharacterized p... 409 3.4e-38 1
UNIPROTKB|F1NVC7 - symbol:LOC771782 "Uncharacterized prot... 406 7.0e-38 1
UNIPROTKB|E2RJS1 - symbol:LOC488576 "Uncharacterized prot... 406 7.0e-38 1
UNIPROTKB|Q96AH8 - symbol:RAB7B "Ras-related protein Rab-... 404 1.1e-37 1
UNIPROTKB|Q08DE8 - symbol:RAB7B "Ras-related protein Rab-... 403 1.5e-37 1
DICTYBASE|DDB_G0287553 - symbol:rab7B "Rab GTPase" specie... 401 2.4e-37 1
MGI|MGI:2442295 - symbol:5430435G22Rik "RIKEN cDNA 543043... 396 8.0e-37 1
UNIPROTKB|F1SPG0 - symbol:RAB7A "Uncharacterized protein"... 394 1.3e-36 1
UNIPROTKB|C9J8S3 - symbol:RAB7A "Ras-related protein Rab-... 368 7.4e-34 1
DICTYBASE|DDB_G0285051 - symbol:rab32D "Rab GTPase" speci... 367 9.5e-34 1
UNIPROTKB|J9NUV0 - symbol:RAB10 "Ras-related protein Rab-... 364 2.0e-33 1
ZFIN|ZDB-GENE-090821-8 - symbol:rab38a "RAB38a, member RA... 360 5.2e-33 1
FB|FBgn0032782 - symbol:Rab9 "Rab9" species:7227 "Drosoph... 358 8.5e-33 1
ZFIN|ZDB-GENE-030826-30 - symbol:rab13 "RAB13, member RAS... 357 1.1e-32 1
UNIPROTKB|F1PTE3 - symbol:RAB13 "Uncharacterized protein"... 355 1.8e-32 1
RGD|620880 - symbol:Rab13 "RAB13, member RAS oncogene fam... 353 2.9e-32 1
ZFIN|ZDB-GENE-040801-62 - symbol:rab35 "RAB35, member RAS... 353 2.9e-32 1
UNIPROTKB|P51153 - symbol:RAB13 "Ras-related protein Rab-... 352 3.7e-32 1
UNIPROTKB|F1RFW5 - symbol:RAB13 "Uncharacterized protein"... 352 3.7e-32 1
UNIPROTKB|I3L5L9 - symbol:RAB13 "Uncharacterized protein"... 352 3.7e-32 1
UNIPROTKB|Q58DS5 - symbol:RAB13 "Ras-related protein Rab-... 351 4.7e-32 1
MGI|MGI:1927232 - symbol:Rab13 "RAB13, member RAS oncogen... 351 4.7e-32 1
TAIR|locus:2082269 - symbol:RABA4D "RAB GTPase homolog A4... 351 4.7e-32 1
UNIPROTKB|Q5KTJ6 - symbol:RAB13 "Ras-related protein Rab-... 348 9.8e-32 1
TAIR|locus:2085089 - symbol:RABE1e "RAB GTPase homolog E1... 347 1.3e-31 1
UNIPROTKB|F1MSJ9 - symbol:RAB35 "Uncharacterized protein"... 343 3.3e-31 1
UNIPROTKB|Q15286 - symbol:RAB35 "Ras-related protein Rab-... 342 4.2e-31 1
UNIPROTKB|F2Z4Z0 - symbol:RAB35 "Uncharacterized protein"... 342 4.2e-31 1
MGI|MGI:1924657 - symbol:Rab35 "RAB35, member RAS oncogen... 342 4.2e-31 1
RGD|1306362 - symbol:Rab35 "RAB35, member RAS oncogene fa... 342 4.2e-31 1
TAIR|locus:2142684 - symbol:RAB8C "RAB GTPase homolog 8C"... 342 4.2e-31 1
UNIPROTKB|C9J4V0 - symbol:RAB7A "Ras-related protein Rab-... 228 4.8e-31 2
DICTYBASE|DDB_G0294571 - symbol:DDB_G0294571 "Rab GTPase"... 341 5.4e-31 1
UNIPROTKB|A6QLS9 - symbol:RAB10 "RAB10 protein" species:9... 341 5.4e-31 1
UNIPROTKB|F2Z4P9 - symbol:RAB10 "Ras-related protein Rab-... 341 5.4e-31 1
UNIPROTKB|P61026 - symbol:RAB10 "Ras-related protein Rab-... 341 5.4e-31 1
UNIPROTKB|F2Z5F2 - symbol:RAB10 "Uncharacterized protein"... 341 5.4e-31 1
UNIPROTKB|Q5R5U1 - symbol:RAB10 "Ras-related protein Rab-... 341 5.4e-31 1
MGI|MGI:105066 - symbol:Rab10 "RAB10, member RAS oncogene... 341 5.4e-31 1
TAIR|locus:2152753 - symbol:RABA4C "RAB GTPase homolog A4... 341 5.4e-31 1
ZFIN|ZDB-GENE-040718-304 - symbol:rab10 "RAB10, member RA... 341 5.4e-31 1
ZFIN|ZDB-GENE-050522-555 - symbol:rab12 "RAB12, member RA... 341 5.4e-31 1
UNIPROTKB|P24409 - symbol:RAB10 "Ras-related protein Rab-... 340 6.9e-31 1
ZFIN|ZDB-GENE-031006-10 - symbol:rab32a "RAB32a, member R... 340 6.9e-31 1
FB|FBgn0016700 - symbol:Rab1 "Rab1" species:7227 "Drosoph... 339 8.8e-31 1
WARNING: Descriptions of 1797 database sequences were not reported due to the
limiting value of parameter V = 100.
>TAIR|locus:2199716 [details] [associations]
symbol:RABG3B "RAB GTPase homolog G3B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0010089 "xylem development" evidence=IMP]
[GO:0010508 "positive regulation of autophagy" evidence=IMP]
[GO:0010623 "developmental programmed cell death" evidence=IMP]
[GO:0048102 "autophagic cell death" evidence=IMP] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0007264
GO:GO:0015031 GO:GO:0010508 PROSITE:PS51419 GO:GO:0010089
eggNOG:COG1100 GO:GO:0048102 GO:GO:0010623 EMBL:AC003979
EMBL:Y12227 KO:K07976 HOGENOM:HOG000233968 EMBL:AB071850
EMBL:Y09821 EMBL:BT024589 IPI:IPI00534402 PIR:T00770
RefSeq:NP_173688.1 UniGene:At.20067 ProteinModelPortal:O04157
SMR:O04157 STRING:O04157 PaxDb:O04157 PRIDE:O04157
EnsemblPlants:AT1G22740.1 GeneID:838880 KEGG:ath:AT1G22740
TAIR:At1g22740 InParanoid:O04157 OMA:CIAKLAL PhylomeDB:O04157
ProtClustDB:CLSN2914412 Genevestigator:O04157 GermOnline:AT1G22740
Uniprot:O04157
Length = 203
Score = 794 (284.6 bits), Expect = 5.4e-79, P = 5.4e-79
Identities = 152/207 (73%), Positives = 175/207 (84%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQYV NKFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FESL NW EFL +A P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNK+D DGG+SRVV +KKA EWCA +GNI YFETSAKED N+D++FLC+ ++AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+QP +T S EQRGGCAC
Sbjct: 181 RDQDIYFQP----DTGSVPEQRGGCAC 203
>TAIR|locus:2052479 [details] [associations]
symbol:RAB7A "RAB GTPase homolog 7A" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
InterPro:IPR020849 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC007019 PANTHER:PTHR24070
KO:K07976 HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071852
EMBL:BT024593 EMBL:AK229492 EMBL:AY084960 IPI:IPI00535065
IPI:IPI00891361 PIR:C84606 RefSeq:NP_001118357.1 RefSeq:NP_565521.1
UniGene:At.14268 ProteinModelPortal:Q9SJ11 SMR:Q9SJ11 PaxDb:Q9SJ11
PRIDE:Q9SJ11 ProMEX:Q9SJ11 EnsemblPlants:AT2G21880.1 GeneID:816724
KEGG:ath:AT2G21880 TAIR:At2g21880 InParanoid:Q948K7 OMA:TKELHID
PhylomeDB:Q9SJ11 ProtClustDB:CLSN2688325 Genevestigator:Q9SJ11
Uniprot:Q9SJ11
Length = 212
Score = 763 (273.6 bits), Expect = 1.0e-75, P = 1.0e-75
Identities = 151/212 (71%), Positives = 173/212 (81%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
++K R LLKVIVLGDSGVGKTSLMNQYVY KF++QYKATIGADFVTKEL +D+K VTLQI
Sbjct: 3 SLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG+AFYRGADCCVLVYDVN K+FE+L NW EFLKQA+P E E PFV
Sbjct: 63 WDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFV 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
L+GNK D DGG+SRVV K+A+EWC +GNIPY ETSAKED NIDEAFL VA IAL NE
Sbjct: 123 LIGNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNER 182
Query: 186 K---DIYYQPQG-ISETVSEV---EQRGGCAC 210
K DIY P+G ++V+++ +Q GCAC
Sbjct: 183 KQSNDIY--PRGQYHDSVTDIIDPDQSRGCAC 212
>TAIR|locus:2118500 [details] [associations]
symbol:RABG3A "RAB GTPase homolog G3A" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005622
"intracellular" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISM]
[GO:0006184 "GTP catabolic process" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=IEA] [GO:0006913
"nucleocytoplasmic transport" evidence=IEA] [GO:0007165 "signal
transduction" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0005774
GO:GO:0007264 EMBL:CP002687 GO:GO:0015031 KO:K07976 IPI:IPI00938875
RefSeq:NP_001154217.1 UniGene:At.26414 ProteinModelPortal:F4JKR6
SMR:F4JKR6 PRIDE:F4JKR6 EnsemblPlants:AT4G09720.3 GeneID:826558
KEGG:ath:AT4G09720 OMA:NEHEQDI Uniprot:F4JKR6
Length = 217
Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
Identities = 150/216 (69%), Positives = 174/216 (80%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA-----------DP 116
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASP 123
Query: 117 GEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+ + PF++LGNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +
Sbjct: 124 SDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTI 183
Query: 177 AEIALKNEHK-DIYYQPQGISETVSEVEQRGG-CAC 210
A+ AL NEH+ DIY+Q GI + V+E E +GG CAC
Sbjct: 184 AKTALANEHEQDIYFQ--GIPDAVTENEPKGGGCAC 217
>TAIR|locus:2093437 [details] [associations]
symbol:RABG3c "RAB GTPase homolog G3C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005634 GO:GO:0005794
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB012247 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
KO:K07897 HSSP:P32939 EMBL:AB071848 EMBL:BT006376 EMBL:AK227936
EMBL:AY084691 IPI:IPI00543139 RefSeq:NP_188231.1 UniGene:At.7607
ProteinModelPortal:Q9LW76 SMR:Q9LW76 PaxDb:Q9LW76 PRIDE:Q9LW76
EnsemblPlants:AT3G16100.1 GeneID:820855 KEGG:ath:AT3G16100
TAIR:At3g16100 InParanoid:Q9LW76 OMA:ECIAKNA PhylomeDB:Q9LW76
ProtClustDB:CLSN2679478 Genevestigator:Q9LW76 Uniprot:Q9LW76
Length = 206
Score = 727 (261.0 bits), Expect = 6.7e-72, P = 6.7e-72
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQIWD
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV DVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D DGG SRVV +KKA WCA +GNIPYFETSAK+ N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + ++ GC C
Sbjct: 184 EVYLPDTIDVAGARQQRSTGCEC 206
>TAIR|locus:2018124 [details] [associations]
symbol:RABG3d "RAB GTPase homolog G3D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005774 "vacuolar membrane" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005794 GO:GO:0005774
GO:GO:0007264 GO:GO:0015031 EMBL:AC037424 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 HSSP:P32939
ProtClustDB:CLSN2679478 EMBL:AB071847 EMBL:AY074361 EMBL:AY096407
IPI:IPI00528726 PIR:H96562 RefSeq:NP_175638.1 UniGene:At.22905
ProteinModelPortal:Q9C820 SMR:Q9C820 IntAct:Q9C820 PaxDb:Q9C820
PRIDE:Q9C820 EnsemblPlants:AT1G52280.1 GeneID:841658
KEGG:ath:AT1G52280 TAIR:At1g52280 InParanoid:Q9C820 OMA:WETEMEL
PhylomeDB:Q9C820 Genevestigator:Q9C820 Uniprot:Q9C820
Length = 206
Score = 726 (260.6 bits), Expect = 8.6e-72, P = 8.6e-72
Identities = 137/206 (66%), Positives = 162/206 (78%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK D DGG SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+ + A KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I + ++ GC C
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>TAIR|locus:2094029 [details] [associations]
symbol:RAB7B "RAB GTPase homolog G3F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006457 "protein folding" evidence=RCA] [GO:0007030 "Golgi
organization" evidence=RCA] [GO:0007033 "vacuole organization"
evidence=RCA] [GO:0009408 "response to heat" evidence=RCA]
[GO:0009644 "response to high light intensity" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0034976
"response to endoplasmic reticulum stress" evidence=RCA]
[GO:0042542 "response to hydrogen peroxide" evidence=RCA]
[GO:0048767 "root hair elongation" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005634 GO:GO:0005794 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 GO:GO:0015031 EMBL:AB026654 PROSITE:PS51419
eggNOG:COG1100 HOGENOM:HOG000233968 KO:K07897 HSSP:P32939
EMBL:AB071846 EMBL:AY035137 EMBL:AY059072 EMBL:AY084266
IPI:IPI00537989 RefSeq:NP_188512.1 UniGene:At.24625
ProteinModelPortal:Q9LS94 SMR:Q9LS94 PaxDb:Q9LS94 PRIDE:Q9LS94
EnsemblPlants:AT3G18820.1 GeneID:821415 KEGG:ath:AT3G18820
TAIR:At3g18820 InParanoid:Q9LS94 OMA:FETSAKV PhylomeDB:Q9LS94
ProtClustDB:CLSN2684537 Genevestigator:Q9LS94 Uniprot:Q9LS94
Length = 206
Score = 725 (260.3 bits), Expect = 1.1e-71, P = 1.1e-71
Identities = 137/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSNQQRSTGCEC 206
>TAIR|locus:2010257 [details] [associations]
symbol:RABG3E "RAB GTPase homolog G3E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006979 "response to oxidative stress" evidence=IEP;IMP]
[GO:0009651 "response to salt stress" evidence=IMP] [GO:0005774
"vacuolar membrane" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005886 GO:GO:0005794 GO:GO:0005774 GO:GO:0007264
GO:GO:0006979 GO:GO:0015031 GO:GO:0009651 PROSITE:PS51419
eggNOG:COG1100 EMBL:AC007504 KO:K07976 HOGENOM:HOG000233968
HSSP:P32939 EMBL:AB071849 EMBL:BT004594 EMBL:AK227548
IPI:IPI00548204 PIR:C96529 RefSeq:NP_001031161.1 RefSeq:NP_175355.1
UniGene:At.19280 ProteinModelPortal:Q9XI98 SMR:Q9XI98 PaxDb:Q9XI98
PRIDE:Q9XI98 EnsemblPlants:AT1G49300.1 EnsemblPlants:AT1G49300.2
GeneID:841353 KEGG:ath:AT1G49300 TAIR:At1g49300 InParanoid:Q9XI98
OMA:VEDAFLC PhylomeDB:Q9XI98 ProtClustDB:CLSN2682475
Genevestigator:Q9XI98 Uniprot:Q9XI98
Length = 206
Score = 723 (259.6 bits), Expect = 1.8e-71, P = 1.8e-71
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGGSSRVV +KKA WCA +GNIPY+ETSAK N+++AFLC+ A+K+ ++
Sbjct: 124 GNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 EMYLPDTIDVGTSNPQRSTGCEC 206
>DICTYBASE|DDB_G0269236 [details] [associations]
symbol:rab7A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0005615 "extracellular space"
evidence=IDA] [GO:0032010 "phagolysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0005764 "lysosome"
evidence=IDA] [GO:0006909 "phagocytosis" evidence=IMP] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0269236
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005615
GO:GO:0007264 EMBL:AAFI02000005 GenomeReviews:CM000150_GR
GO:GO:0045335 GO:GO:0015031 GO:GO:0006909 GO:GO:0005764
PROSITE:PS51419 eggNOG:COG1100 KO:K07897 OMA:SPRDPEH EMBL:U02928
RefSeq:XP_645911.1 ProteinModelPortal:P36411 SMR:P36411
STRING:P36411 PRIDE:P36411 EnsemblProtists:DDB0191507
GeneID:8616852 KEGG:ddi:DDB_G0269236 ProtClustDB:CLSZ2729277
Uniprot:P36411
Length = 203
Score = 653 (234.9 bits), Expect = 4.7e-64, P = 4.7e-64
Identities = 127/201 (63%), Positives = 153/201 (76%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWD
Sbjct: 4 KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV KTFE+L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RVV QK+A WC +GNIPYFETSAKE N+++AF +A A+K E
Sbjct: 124 GNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGL 181
Query: 188 IYYQPQGISETVSEVEQRGGC 208
++ P I + GC
Sbjct: 182 VFPIPTNIQVIPEPQPAKSGC 202
>ASPGD|ASPL0000062908 [details] [associations]
symbol:avaA species:162425 "Emericella nidulans"
[GO:0042144 "vacuole fusion, non-autophagic" evidence=IMP]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0007032 "endosome organization" evidence=IMP]
[GO:0000329 "fungal-type vacuole membrane" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0072665 "protein localization to vacuole" evidence=IEA]
[GO:0061191 "positive regulation of vacuole fusion, non-autophagic"
evidence=IEA] [GO:0030100 "regulation of endocytosis" evidence=IEA]
[GO:0042147 "retrograde transport, endosome to Golgi" evidence=IEA]
[GO:0007035 "vacuolar acidification" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0034727
"piecemeal microautophagy of nucleus" evidence=IEA] [GO:0031321
"ascospore-type prospore assembly" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] [GO:0006897 "endocytosis"
evidence=IEA] [GO:0051469 "vesicle fusion with vacuole"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 HOGENOM:HOG000233968 OMA:SPRDPEH
ProteinModelPortal:C8VQY7 SMR:C8VQY7 EnsemblFungi:CADANIAT00002661
Uniprot:C8VQY7
Length = 205
Score = 641 (230.7 bits), Expect = 8.8e-63, P = 8.8e-63
Identities = 122/206 (59%), Positives = 157/206 (76%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ +LKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVIGNKIDMEE-SKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ Y + + +R GCAC
Sbjct: 180 EAEEYGGDYTDPINIHDTTERDGCAC 205
>ZFIN|ZDB-GENE-040704-16 [details] [associations]
symbol:zgc:91909 "zgc:91909" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040704-16 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 GeneTree:ENSGT00700000104345
OMA:WETEMEL EMBL:CR855300 EMBL:BC072717 IPI:IPI00509134
RefSeq:NP_001002178.1 UniGene:Dr.32183 SMR:Q6GQM5 STRING:Q6GQM5
Ensembl:ENSDART00000004065 Ensembl:ENSDART00000124225 GeneID:431725
KEGG:dre:431725 InParanoid:Q6GQM5 NextBio:20830961 Uniprot:Q6GQM5
Length = 204
Score = 636 (228.9 bits), Expect = 3.0e-62, P = 3.0e-62
Identities = 127/204 (62%), Positives = 150/204 (73%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID D +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E D
Sbjct: 124 GNKIDLD---NRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQESVD 180
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I G GC+C
Sbjct: 181 KYDFPDEIKLGNDRPMSNGEGCSC 204
>POMBASE|SPBC405.04c [details] [associations]
symbol:ypt7 "GTPase Ypt7" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=IC] [GO:0005634
"nucleus" evidence=IDA] [GO:0005773 "vacuole" evidence=IEA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0006886 "intracellular
protein transport" evidence=IC] [GO:0006896 "Golgi to vacuole
transport" evidence=ISS] [GO:0007035 "vacuolar acidification"
evidence=IGI] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IMP] [GO:0031321 "ascospore-type prospore assembly"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0045324 "late endosome to vacuole transport"
evidence=IMP] [GO:0051469 "vesicle fusion with vacuole"
evidence=IMP] [GO:0061191 "positive regulation of vacuole fusion,
non-autophagic" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPBC405.04c GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005634 GO:GO:0005773 GO:GO:0006886 GO:GO:0007264
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR GO:GO:0030100
PROSITE:PS51419 GO:GO:0006896 eggNOG:COG1100 GO:GO:0045324
GO:GO:0007035 GO:GO:0042144 GO:GO:0031321 GO:GO:0051469
HOGENOM:HOG000233968 KO:K07897 OMA:SPRDPEH PIR:T40425
RefSeq:NP_596307.1 ProteinModelPortal:O94655 SMR:O94655
STRING:O94655 PRIDE:O94655 EnsemblFungi:SPBC405.04c.1
GeneID:2540763 KEGG:spo:SPBC405.04c OrthoDB:EOG48WGB7
NextBio:20801882 GO:GO:0061191 Uniprot:O94655
Length = 205
Score = 631 (227.2 bits), Expect = 1.0e-61, P = 1.0e-61
Identities = 120/180 (66%), Positives = 146/180 (81%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+++LLKVI+LG+SGVGKTS+MNQYV KFS+ YKATIGADF+TKE+ +DDK+VTLQ+WD
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P E PF+LL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R+V + KAL +C RG IPYFETSAKE N+ EAF VA++AL+N D
Sbjct: 124 GNKVDVEE-QKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSD 182
>ZFIN|ZDB-GENE-040927-2 [details] [associations]
symbol:zgc:100918 "zgc:100918" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-040927-2 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07897 OrthoDB:EOG4QFWF4
GeneTree:ENSGT00700000104345 EMBL:CABZ01063557 EMBL:CABZ01063558
EMBL:CABZ01063559 EMBL:CABZ01063560 EMBL:BC082296 IPI:IPI00484756
RefSeq:NP_001005591.1 UniGene:Dr.45927 SMR:Q641M4 STRING:Q641M4
Ensembl:ENSDART00000113926 Ensembl:ENSDART00000123608 GeneID:449549
KEGG:dre:449549 InParanoid:Q641M4 NextBio:20832667 Uniprot:Q641M4
Length = 205
Score = 630 (226.8 bits), Expect = 1.3e-61, P = 1.3e-61
Identities = 126/205 (61%), Positives = 151/205 (73%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEV 180
Query: 187 DIYYQPQGIS-ETVSEVEQRGGCAC 210
+ Y P I V GC+C
Sbjct: 181 ETYDFPDQIKLRDDRPVSSGDGCSC 205
>UNIPROTKB|F1MJQ1 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003
IPI:IPI00704752 UniGene:Bt.41314 GeneTree:ENSGT00700000104345
OMA:SPRDPEH GO:GO:0007174 EMBL:DAAA02054678
Ensembl:ENSBTAT00000013451 Uniprot:F1MJQ1
Length = 207
Score = 617 (222.3 bits), Expect = 3.1e-60, P = 3.1e-60
Identities = 123/207 (59%), Positives = 156/207 (75%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRG--GCAC 210
++Y + P+ I ++ + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>RGD|61908 [details] [associations]
symbol:Rab7a "RAB7A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late endosome"
evidence=ISO;IDA;TAS] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=IEA;ISO]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IEA;ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0031410 "cytoplasmic vesicle" evidence=IDA]
[GO:0042470 "melanosome" evidence=IEA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO;ISS] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone resorption"
evidence=IMP] [GO:0048365 "Rac GTPase binding" evidence=IPI]
[GO:0090383 "phagosome acidification" evidence=ISO;ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO;ISS] [GO:0097208 "alveolar
lamellar body" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:61908 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0097208 GO:GO:0005770 GO:GO:0045453
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
EMBL:X12535 EMBL:AF286535 EMBL:AB158427 EMBL:AB158428 EMBL:BC072470
IPI:IPI00215564 PIR:S01934 RefSeq:NP_076440.1 UniGene:Rn.1425
PDB:1VG0 PDB:1VG1 PDB:1VG8 PDB:1VG9 PDBsum:1VG0 PDBsum:1VG1
PDBsum:1VG8 PDBsum:1VG9 ProteinModelPortal:P09527 SMR:P09527
IntAct:P09527 MINT:MINT-1775656 STRING:P09527 PhosphoSite:P09527
PRIDE:P09527 Ensembl:ENSRNOT00000016432 GeneID:29448 KEGG:rno:29448
UCSC:RGD:61908 InParanoid:P09527 EvolutionaryTrace:P09527
NextBio:609213 Genevestigator:P09527 GermOnline:ENSRNOG00000012247
Uniprot:P09527
Length = 207
Score = 615 (221.5 bits), Expect = 5.0e-60, P = 5.0e-60
Identities = 123/207 (59%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
++Y + P+ I +E + C+C
Sbjct: 181 ELYNEFPEPIKLDKNERAKASAESCSC 207
>UNIPROTKB|E1C0F3 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0007174 "epidermal growth factor
catabolic process" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0045022 "early endosome to late endosome transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 GO:GO:0005764 GO:GO:0005770
GO:GO:0033365 GO:GO:0008333 GO:GO:0045022 GO:GO:0019003 CTD:7879
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH GO:GO:0007174
EMBL:AADN02014058 EMBL:AADN02014057 IPI:IPI00601244
RefSeq:XP_003642026.1 RefSeq:XP_414359.1 UniGene:Gga.5872
PRIDE:E1C0F3 Ensembl:ENSGALT00000009495 GeneID:416016
KEGG:gga:416016 NextBio:20819533 Uniprot:E1C0F3
Length = 207
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 123/207 (59%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGIS-ETVSEVEQRG-GCAC 210
++Y + P+ I + V+ C+C
Sbjct: 181 ELYNEFPEPIKLDKNDRVKASAESCSC 207
>UNIPROTKB|Q3T0F5 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] [GO:0090383 "phagosome
acidification" evidence=ISS] [GO:0045022 "early endosome to late
endosome transport" evidence=ISS] [GO:0005770 "late endosome"
evidence=ISS] [GO:0042470 "melanosome" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:BC102415
IPI:IPI00704752 RefSeq:NP_001030253.1 UniGene:Bt.41314
ProteinModelPortal:Q3T0F5 SMR:Q3T0F5 STRING:Q3T0F5 PRIDE:Q3T0F5
GeneID:509970 KEGG:bta:509970 CTD:7879 InParanoid:Q3T0F5 KO:K07897
OrthoDB:EOG4QFWF4 NextBio:20869222 Uniprot:Q3T0F5
Length = 207
Score = 613 (220.8 bits), Expect = 8.1e-60, P = 8.1e-60
Identities = 122/207 (58%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF + ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRG--GCAC 210
++Y + P+ I ++ + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>UNIPROTKB|P18067 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0090385 "phagosome-lysosome fusion" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0045022
"early endosome to late endosome transport" evidence=IMP]
[GO:0007174 "epidermal growth factor catabolic process"
evidence=IMP] [GO:0005770 "late endosome" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0019003 "GDP binding" evidence=IEA] [GO:0008333 "endosome to
lysosome transport" evidence=IEA] [GO:0006622 "protein targeting to
lysosome" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0003924
GO:GO:0005764 GO:GO:0005770 GO:GO:0033365 GO:GO:0008333
PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 KO:K07897
OrthoDB:EOG4QFWF4 EMBL:M35522 PIR:B30413 RefSeq:NP_001003316.1
UniGene:Cfa.45048 ProteinModelPortal:P18067 SMR:P18067
STRING:P18067 PRIDE:P18067 Ensembl:ENSCAFT00000038482 GeneID:404007
KEGG:cfa:404007 GeneTree:ENSGT00700000104345 InParanoid:P18067
OMA:SPRDPEH BindingDB:P18067 NextBio:20817494 GO:GO:0007174
Uniprot:P18067
Length = 207
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 122/207 (58%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
++Y + P+ I ++ + C+C
Sbjct: 181 ELYNEFPEPIKLDKNDRAKTSAESCSC 207
>UNIPROTKB|P51149 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045453 "bone resorption"
evidence=IEA] [GO:0048365 "Rac GTPase binding" evidence=IEA]
[GO:0097208 "alveolar lamellar body" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0090385 "phagosome-lysosome fusion" evidence=IMP] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0045022 "early endosome to
late endosome transport" evidence=IMP] [GO:0015031 "protein
transport" evidence=TAS] [GO:0005770 "late endosome" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=TAS] [GO:0005764
"lysosome" evidence=IDA] [GO:0006897 "endocytosis" evidence=TAS]
[GO:0005765 "lysosomal membrane" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0006622 "protein targeting to lysosome"
evidence=IMP] [GO:0005525 "GTP binding" evidence=IDA] [GO:0003924
"GTPase activity" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IMP] [GO:0007174 "epidermal growth factor catabolic
process" evidence=IMP] [GO:0006184 "GTP catabolic process"
evidence=IDA;TAS] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0043231 "intracellular membrane-bounded organelle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0042470
Reactome:REACT_6900 GO:GO:0007264 GO:GO:0045335
Pathway_Interaction_DB:il12_2pathway GO:GO:0005765 GO:GO:0019886
EMBL:CH471052 GO:GO:0003924 GO:GO:0006897 GO:GO:0005770
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 GO:GO:0006622
eggNOG:COG1100 GO:GO:0019003 GO:GO:0090382 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:7879 KO:K07897 OrthoDB:EOG4QFWF4
OMA:SPRDPEH GO:GO:0007174 EMBL:X93499 EMBL:U44104 EMBL:AF050175
EMBL:AF498942 EMBL:AK000826 EMBL:AK290721 EMBL:BC008721
IPI:IPI00016342 PIR:JC5268 RefSeq:NP_004628.4 UniGene:Hs.741172
PDB:1T91 PDB:1YHN PDB:3LAW PDBsum:1T91 PDBsum:1YHN PDBsum:3LAW
ProteinModelPortal:P51149 SMR:P51149 DIP:DIP-39879N IntAct:P51149
MINT:MINT-4999676 STRING:P51149 PhosphoSite:P51149 DMDM:1709999
PaxDb:P51149 PeptideAtlas:P51149 PRIDE:P51149 DNASU:7879
Ensembl:ENST00000265062 GeneID:7879 KEGG:hsa:7879 UCSC:uc003eks.1
GeneCards:GC03P128444 HGNC:HGNC:9788 HPA:HPA006964 MIM:600882
MIM:602298 neXtProt:NX_P51149 Orphanet:99936 PharmGKB:PA162400619
InParanoid:P51149 PhylomeDB:P51149 ChiTaRS:RAB7A
EvolutionaryTrace:P51149 GenomeRNAi:7879 NextBio:30336
ArrayExpress:P51149 Bgee:P51149 CleanEx:HS_RAB7A
Genevestigator:P51149 GermOnline:ENSG00000075785 Uniprot:P51149
Length = 207
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 122/207 (58%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
++Y + P+ I ++ + C+C
Sbjct: 181 ELYNEFPEPIKLDKNDRAKASAESCSC 207
>MGI|MGI:105068 [details] [associations]
symbol:Rab7 "RAB7, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005764 "lysosome"
evidence=ISO] [GO:0005768 "endosome" evidence=IEA] [GO:0005770
"late endosome" evidence=ISO;IDA] [GO:0005794 "Golgi apparatus"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=ISO]
[GO:0006622 "protein targeting to lysosome" evidence=ISO]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0007174 "epidermal growth
factor catabolic process" evidence=ISO] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0008333 "endosome
to lysosome transport" evidence=ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031410 "cytoplasmic vesicle" evidence=ISO] [GO:0045022 "early
endosome to late endosome transport" evidence=ISO] [GO:0045335
"phagocytic vesicle" evidence=ISO] [GO:0045453 "bone resorption"
evidence=ISO] [GO:0048365 "Rac GTPase binding" evidence=ISO]
[GO:0090383 "phagosome acidification" evidence=ISO] [GO:0090385
"phagosome-lysosome fusion" evidence=ISO] [GO:0097208 "alveolar
lamellar body" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105068 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0042470 GO:GO:0006886 GO:GO:0007264 GO:GO:0045335
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0033365
GO:GO:0008333 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968 KO:K07897
OrthoDB:EOG4QFWF4 OMA:SPRDPEH GO:GO:0007174 EMBL:X89650
EMBL:AK005004 EMBL:BC004597 EMBL:BC086793 IPI:IPI00408892
PIR:S62733 RefSeq:NP_033031.2 UniGene:Mm.333233 UniGene:Mm.486309
ProteinModelPortal:P51150 SMR:P51150 STRING:P51150
PhosphoSite:P51150 PaxDb:P51150 PRIDE:P51150
Ensembl:ENSMUST00000095048 Ensembl:ENSMUST00000113596
Ensembl:ENSMUST00000113597 Ensembl:ENSMUST00000113598
Ensembl:ENSMUST00000113600 GeneID:19349 KEGG:mmu:19349 CTD:19349
InParanoid:P51150 NextBio:296377 Bgee:P51150 CleanEx:MM_RAB7
Genevestigator:P51150 Uniprot:P51150
Length = 207
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 122/207 (58%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
++Y + P+ I ++ + C+C
Sbjct: 181 ELYNEFPEPIKLDKNDRAKASAESCSC 207
>ZFIN|ZDB-GENE-040426-1352 [details] [associations]
symbol:rab7 "RAB7, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040426-1352 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P35278 KO:K07897
OrthoDB:EOG4QFWF4 GeneTree:ENSGT00700000104345 CTD:19349
OMA:FETSAKV EMBL:CR854846 EMBL:BC054602 EMBL:BC155202
IPI:IPI00486424 RefSeq:NP_957222.1 UniGene:Dr.12260 SMR:Q7T2C6
STRING:Q7T2C6 Ensembl:ENSDART00000027014 GeneID:393902
KEGG:dre:393902 InParanoid:Q7T2C6 NextBio:20814880 Uniprot:Q7T2C6
Length = 207
Score = 612 (220.5 bits), Expect = 1.0e-59, P = 1.0e-59
Identities = 120/190 (63%), Positives = 149/190 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGI 195
++Y + P+ I
Sbjct: 181 ELYNEFPEPI 190
>UNIPROTKB|Q5R9Y4 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9601
"Pongo abelii" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 HOVERGEN:HBG009351
CTD:7879 KO:K07897 EMBL:CR859246 RefSeq:NP_001127416.1
UniGene:Pab.19044 HSSP:P09527 ProteinModelPortal:Q5R9Y4 SMR:Q5R9Y4
PRIDE:Q5R9Y4 GeneID:100174486 KEGG:pon:100174486 Uniprot:Q5R9Y4
Length = 207
Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
Identities = 122/207 (58%), Positives = 155/207 (74%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
++Y + P+ I ++ + C+C
Sbjct: 181 ELYNEFPKPIKLDKNDRAKASAESCSC 207
>WB|WBGene00004271 [details] [associations]
symbol:rab-7 species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=IEA;IDA] [GO:0003924
"GTPase activity" evidence=IEA;ISS;IDA] [GO:0005525 "GTP binding"
evidence=IEA;ISS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0019915
"lipid storage" evidence=IMP] [GO:0008219 "cell death"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000003 "reproduction" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0043652 "engulfment of
apoptotic cell" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0001555 "oocyte growth" evidence=IMP] [GO:0031090
"organelle membrane" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0005764 "lysosome" evidence=IDA] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0090387 "phagolysosome
assembly involved in apoptotic cell clearance" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0008340 GO:GO:0009792 GO:GO:0007264
GO:GO:0030670 GO:GO:0002119 GO:GO:0015031 GO:GO:0008219
GO:GO:0018996 GO:GO:0003924 GO:GO:0010171 GO:GO:0040011
GO:GO:0005764 GO:GO:0016197 GO:GO:0005770 GO:GO:0019915
GO:GO:0043652 eggNOG:COG1100 GO:GO:0001555 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH HSSP:P32939
EMBL:Z66516 GO:GO:0090387 PIR:T26119 RefSeq:NP_496549.1
ProteinModelPortal:Q23146 SMR:Q23146 IntAct:Q23146 STRING:Q23146
PaxDb:Q23146 EnsemblMetazoa:W03C9.3.1 EnsemblMetazoa:W03C9.3.2
EnsemblMetazoa:W03C9.3.3 GeneID:174834 KEGG:cel:CELE_W03C9.3
UCSC:W03C9.3.1 CTD:174834 WormBase:W03C9.3 InParanoid:Q23146
NextBio:885704 Uniprot:Q23146
Length = 209
Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
Identities = 119/207 (57%), Positives = 149/207 (71%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+++ +DD+ VTLQIWD
Sbjct: 5 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL +DV +F+SL +WR+EFL QA P + + PFVLL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNK+D + S R V K+A WC +GNIPY+E SAKE N++ AFL +A AL E +
Sbjct: 125 GNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQE 182
Query: 187 --DIYYQPQGISETVSEV-EQRGGCAC 210
D P I ++ +Q GC C
Sbjct: 183 TNDFPEFPDQIRLNPNQQNQQNSGCNC 209
>UNIPROTKB|O97572 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9986
"Oryctolagus cuniculus" [GO:0005770 "late endosome" evidence=ISS]
[GO:0045022 "early endosome to late endosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0090383 "phagosome acidification" evidence=ISS] [GO:0090385
"phagosome-lysosome fusion" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0042470
GO:GO:0007264 GO:GO:0045335 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 GO:GO:0045022 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:7879 OrthoDB:EOG4QFWF4
EMBL:AF050174 RefSeq:NP_001075503.1 UniGene:Ocu.2322
ProteinModelPortal:O97572 SMR:O97572 PRIDE:O97572 GeneID:100008682
Uniprot:O97572
Length = 207
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 119/207 (57%), Positives = 149/207 (71%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSL AFYRGADCCVLV+DV TF++L +WR EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A W + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 187 DIYYQ---PQGISETVSEVEQRGGCAC 210
++Y + P + + C+C
Sbjct: 181 ELYNEFPEPMKLDKNDRAKTSAESCSC 207
>UNIPROTKB|Q95UJ0 [details] [associations]
symbol:Rab7a "Ras-related protein Rab-7a" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0030670 "phagocytic vesicle membrane"
evidence=IDA] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0090382 "phagosome maturation" evidence=IMP] [GO:0090383
"phagosome acidification" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0030670 GO:GO:0015031 PROSITE:PS51419 GO:GO:0090383
EMBL:AY050242 EMBL:AY744503 EMBL:FJ358492 HSSP:P32939
ProteinModelPortal:Q95UJ0 SMR:Q95UJ0 Uniprot:Q95UJ0
Length = 206
Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
Identities = 113/204 (55%), Positives = 150/204 (73%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + KA +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETV-SEVEQ--RGGC 208
+ P ++ T S+ Q +GGC
Sbjct: 182 EIFFPTTVTLTKQSQKPQAKQGGC 205
>UNIPROTKB|Q6DUB4 [details] [associations]
symbol:Rab7b "Ras-related protein Rab-7b" species:43137
"Paramecium octaurelia" [GO:0003674 "molecular_function"
evidence=ND] [GO:0005874 "microtubule" evidence=IDA] [GO:0008150
"biological_process" evidence=ND] [GO:0031912 "oral apparatus"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 GO:GO:0005874 EMBL:AY644723 EMBL:AY875981
ProteinModelPortal:Q6DUB4 SMR:Q6DUB4 GO:GO:0031912 Uniprot:Q6DUB4
Length = 206
Score = 589 (212.4 bits), Expect = 2.8e-57, P = 2.8e-57
Identities = 110/204 (53%), Positives = 150/204 (73%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + K+ +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVEQR---GGC 208
+ P ++ T + +++ GGC
Sbjct: 182 EIFFPTTVTLTKQDPKKQTKQGGC 205
>FB|FBgn0015795 [details] [associations]
symbol:Rab7 "Rab7" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0016197
"endosomal transport" evidence=IMP;TAS] [GO:0005770 "late endosome"
evidence=IDA] [GO:0008333 "endosome to lysosome transport"
evidence=IGI;IMP;TAS] [GO:0048102 "autophagic cell death"
evidence=IEP] [GO:0035071 "salivary gland cell autophagic cell
death" evidence=IEP] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0033227 "dsRNA transport"
evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0031982 "vesicle" evidence=ISS] [GO:0044130 "negative
regulation of growth of symbiont in host" evidence=IMP] [GO:0048190
"wing disc dorsal/ventral pattern formation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0048190 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 GO:GO:0044130 GO:GO:0008333 GO:GO:0033227
GO:GO:0035071 eggNOG:COG1100 KO:K07897 GeneTree:ENSGT00700000104345
OMA:SPRDPEH CTD:19349 HSSP:P32939 EMBL:AF079459 EMBL:AF263363
EMBL:AY060236 EMBL:BT124755 EMBL:AB035672 EMBL:AM294823
EMBL:AM294824 EMBL:AM294825 EMBL:AM294826 EMBL:AM294827
EMBL:AM294828 EMBL:AM294829 EMBL:AM294830 EMBL:AM294831
EMBL:AM294832 EMBL:AM294833 EMBL:FM245635 EMBL:FM245636
EMBL:FM245637 EMBL:FM245638 EMBL:FM245639 EMBL:FM245640
EMBL:FM245641 EMBL:FM245642 EMBL:FM245643 EMBL:FM245644
EMBL:FM245645 RefSeq:NP_001247276.1 RefSeq:NP_001247277.1
RefSeq:NP_524472.1 UniGene:Dm.1701 SMR:O76742 MINT:MINT-1017301
STRING:O76742 EnsemblMetazoa:FBtr0084503 EnsemblMetazoa:FBtr0308611
EnsemblMetazoa:FBtr0308612 GeneID:42841 KEGG:dme:Dmel_CG5915
UCSC:CG5915-RA FlyBase:FBgn0015795 InParanoid:O76742
OrthoDB:EOG4Q2BXM GenomeRNAi:42841 NextBio:830855 Uniprot:O76742
Length = 207
Score = 575 (207.5 bits), Expect = 8.6e-56, P = 8.6e-56
Identities = 108/177 (61%), Positives = 141/177 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 177
>POMBASE|SPAPB1A10.10c [details] [associations]
symbol:ypt71 "GTPase Ypt71" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IC] [GO:0005634
"nucleus" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006896 "Golgi
to vacuole transport" evidence=ISO] [GO:0006897 "endocytosis"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=ISM] [GO:0061192 "negative regulation of
vacuole fusion, non-autophagic" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPAPB1A10.10c GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005634 GO:GO:0005774
GO:GO:0006886 GO:GO:0007264 EMBL:CU329670 GenomeReviews:CU329670_GR
GO:GO:0003924 GO:GO:0006897 PROSITE:PS51419 GO:GO:0006896
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 RefSeq:NP_593524.1
ProteinModelPortal:Q9HDY0 SMR:Q9HDY0 STRING:Q9HDY0 PRIDE:Q9HDY0
EnsemblFungi:SPAPB1A10.10c.1 GeneID:2543411 KEGG:spo:SPAPB1A10.10c
OMA:CNIDEAF NextBio:20804426 GO:GO:0061192 Uniprot:Q9HDY0
Length = 208
Score = 553 (199.7 bits), Expect = 1.9e-53, P = 1.9e-53
Identities = 106/182 (58%), Positives = 143/182 (78%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LKV++LGDSGVGKT LMNQ+V KFS++YKATIGADF+TK++ +DDKLVTLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCV+VY+VN K+F+S++NWR+EFL Q E A PF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDEC-AFPF 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALK 182
+++GN+ID D S R V +AL++C + N+ +FE SAKE+ N+ + F V+ +AL+
Sbjct: 120 IIVGNQIDKDA-SKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 183 NE 184
NE
Sbjct: 179 NE 180
>SGD|S000004460 [details] [associations]
symbol:YPT7 "Rab family GTPase" species:4932 "Saccharomyces
cerevisiae" [GO:0006896 "Golgi to vacuole transport" evidence=TAS]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IDA] [GO:0006897
"endocytosis" evidence=IMP] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=IDA] [GO:0032889 "regulation of vacuole fusion,
non-autophagic" evidence=IMP] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0005773 "vacuole" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030906 "retromer complex, inner shell"
evidence=IPI] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0042147 "retrograde transport, endosome to Golgi"
evidence=IPI] [GO:0072665 "protein localization to vacuole"
evidence=IMP] [GO:0034727 "piecemeal microautophagy of nucleus"
evidence=IMP] [GO:0006810 "transport" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 SGD:S000004460 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0005741 GO:GO:0015031 GO:GO:0003924
GO:GO:0006897 GO:GO:0000329 EMBL:BK006946 GO:GO:0000011
PROSITE:PS51419 EMBL:Z48613 GO:GO:0006896 GO:GO:0032889
eggNOG:COG1100 GO:GO:0042147 GO:GO:0034727 HOGENOM:HOG000233968
KO:K07897 GeneTree:ENSGT00700000104345 OMA:SPRDPEH
OrthoDB:EOG48WGB7 EMBL:X68144 EMBL:D64114 PIR:A44334
RefSeq:NP_013713.1 PDB:1KY2 PDB:1KY3 PDBsum:1KY2 PDBsum:1KY3
ProteinModelPortal:P32939 SMR:P32939 DIP:DIP-1735N IntAct:P32939
MINT:MINT-385354 STRING:P32939 PaxDb:P32939 PeptideAtlas:P32939
PRIDE:P32939 EnsemblFungi:YML001W GeneID:855012 KEGG:sce:YML001W
CYGD:YML001w EvolutionaryTrace:P32939 NextBio:978183
Genevestigator:P32939 GermOnline:YML001W GO:GO:0072665
Uniprot:P32939
Length = 208
Score = 552 (199.4 bits), Expect = 2.4e-53, P = 2.4e-53
Identities = 109/209 (52%), Positives = 150/209 (71%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTL 63
++ +++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNKID + S ++V +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 121 FVILGNKIDAEE-SKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQ 179
Query: 184 EHKDIYYQPQGISETVS-EVE-QRGGCAC 210
D ++ ++ ++ + C+C
Sbjct: 180 NQADTEAFEDDYNDAINIRLDGENNSCSC 208
>TAIR|locus:2164905 [details] [associations]
symbol:RABG1 "RAB GTPase homolog G1" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AB012243 KO:K07976
HOGENOM:HOG000233968 HSSP:P32939 EMBL:AB071853 IPI:IPI00545888
RefSeq:NP_568566.1 UniGene:At.26413 ProteinModelPortal:Q948K6
SMR:Q948K6 PRIDE:Q948K6 EnsemblPlants:AT5G39620.1 GeneID:833958
KEGG:ath:AT5G39620 TAIR:At5g39620 InParanoid:Q948K6 OMA:FVLMGNK
PhylomeDB:Q948K6 Genevestigator:Q948K6 Uniprot:Q948K6
Length = 204
Score = 540 (195.1 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 106/199 (53%), Positives = 138/199 (69%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I+LGDSGVGKTSL+ +Y F Q + +TI D VTKE+ + ++ V LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+SL S FYR DCCVLVYDVN KTFES+ NW +EF+KQA+P PFVL+GNK D
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ 191
+ G RVV ++ A +WC +GNI YFETSAK N++EAFL +A+ AL NE + D +
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQIDDMER 185
Query: 192 PQGISETVSEVEQRGGCAC 210
+ + T+ + R C+C
Sbjct: 186 YRSVVPTIEKETPRSRCSC 204
>UNIPROTKB|C9J592 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0045453
"bone resorption" evidence=IEA] [GO:0048365 "Rac GTPase binding"
evidence=IEA] [GO:0097208 "alveolar lamellar body" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005770 HOGENOM:HOG000233968 HGNC:HGNC:9788 ChiTaRS:RAB7A
EMBL:AC079945 EMBL:AC023598 EMBL:AC117508 EMBL:AC139617
IPI:IPI00945735 ProteinModelPortal:C9J592 SMR:C9J592 STRING:C9J592
PRIDE:C9J592 Ensembl:ENST00000464496 ArrayExpress:C9J592
Bgee:C9J592 Uniprot:C9J592
Length = 150
Score = 528 (190.9 bits), Expect = 8.3e-51, P = 8.3e-51
Identities = 101/150 (67%), Positives = 121/150 (80%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIP 157
GNKID + +R V K+A WC + NIP
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIP 150
>CGD|CAL0006268 [details] [associations]
symbol:YPT72 species:5476 "Candida albicans" [GO:0003924
"GTPase activity" evidence=ISS] [GO:0000324 "fungal-type vacuole"
evidence=IDA] [GO:0007033 "vacuole organization" evidence=IMP]
[GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0036187 "cell growth mode
switching, budding to filamentous" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0061191 "positive
regulation of vacuole fusion, non-autophagic" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0045324
"late endosome to vacuole transport" evidence=IEA] [GO:0007035
"vacuolar acidification" evidence=IEA] [GO:0042144 "vacuole fusion,
non-autophagic" evidence=IEA] [GO:0034727 "piecemeal microautophagy
of nucleus" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0000011 "vacuole inheritance"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0051469
"vesicle fusion with vacuole" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/187 (55%), Positives = 137/187 (73%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLV 61
+S + +++ LLKVI+LGDSGVGKTSLM Q+V +KFS QYKATIGADF+TKE+ +D+ K V
Sbjct: 1 MSSSSRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSV 60
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ +
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQD 120
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYR--G--NIPYFETSAKEDCNIDEAFLCVA 177
PF+++GNKID D S ++ K L G N P FETSAK+ N++ AF +A
Sbjct: 121 FPFIIIGNKIDVDD-SKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIA 179
Query: 178 EIALKNE 184
++AL+ E
Sbjct: 180 KMALQQE 186
>UNIPROTKB|Q59ZB7 [details] [associations]
symbol:YPT7 "Likely rab family GTP-binding protein"
species:237561 "Candida albicans SC5314" [GO:0000324 "fungal-type
vacuole" evidence=IDA] [GO:0007033 "vacuole organization"
evidence=IMP] [GO:0009405 "pathogenesis" evidence=IMP] [GO:0030447
"filamentous growth" evidence=IMP] [GO:0036180 "filamentous growth
of a population of unicellular organisms in response to biotic
stimulus" evidence=IMP] [GO:0036187 "cell growth mode switching,
budding to filamentous" evidence=IMP] [GO:0071216 "cellular
response to biotic stimulus" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0006268 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0071216 GO:GO:0036180 GO:GO:0009405
EMBL:AACQ01000095 GO:GO:0015031 GO:GO:0000324 GO:GO:0007033
eggNOG:COG1100 GO:GO:0036187 KO:K07897 RefSeq:XP_714835.1
ProteinModelPortal:Q59ZB7 SMR:Q59ZB7 STRING:Q59ZB7 GeneID:3643523
KEGG:cal:CaO19.2245 Uniprot:Q59ZB7
Length = 217
Score = 507 (183.5 bits), Expect = 1.4e-48, P = 1.4e-48
Identities = 103/187 (55%), Positives = 137/187 (73%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLV 61
+S + +++ LLKVI+LGDSGVGKTSLM Q+V +KFS QYKATIGADF+TKE+ +D+ K V
Sbjct: 1 MSSSSRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSV 60
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ +
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQD 120
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYR--G--NIPYFETSAKEDCNIDEAFLCVA 177
PF+++GNKID D S ++ K L G N P FETSAK+ N++ AF +A
Sbjct: 121 FPFIIIGNKIDVDD-SKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIA 179
Query: 178 EIALKNE 184
++AL+ E
Sbjct: 180 KMALQQE 186
>UNIPROTKB|Q5ZMI5 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0019003 "GDP binding"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EMBL:AADN02011353 EMBL:AJ719399 IPI:IPI00575306
RefSeq:NP_001008678.1 UniGene:Gga.21374 SMR:Q5ZMI5
Ensembl:ENSGALT00000026762 GeneID:418635 KEGG:gga:418635
InParanoid:Q5ZMI5 NextBio:20821791 Uniprot:Q5ZMI5
Length = 201
Score = 483 (175.1 bits), Expect = 4.8e-46, P = 4.8e-46
Identities = 93/189 (49%), Positives = 130/189 (68%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VTLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKD 187
NK+D + R V ++A +WC GN PYFETSAK+ N+ AF V + + D
Sbjct: 124 NKVDIN---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 188 IYYQPQGIS 196
+ Q ++
Sbjct: 181 HFIQTDTVN 189
>RGD|1562951 [details] [associations]
symbol:Rab9b "RAB9B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0045335 "phagocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1562951 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 OrthoDB:EOG4R7VBS CTD:51209 KO:K07900 OMA:CCPYFET
EMBL:CH474076 IPI:IPI00195994 RefSeq:NP_001102488.1
UniGene:Rn.43853 Ensembl:ENSRNOT00000003300 GeneID:367915
KEGG:rno:367915 UCSC:RGD:1562951 NextBio:691848 Uniprot:D3ZP15
Length = 201
Score = 475 (172.3 bits), Expect = 3.4e-45, P = 3.4e-45
Identities = 90/162 (55%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|E1BVF5 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104345 CTD:51209 KO:K07900
OMA:CCPYFET EMBL:AADN02013205 IPI:IPI00585123 RefSeq:XP_001232252.1
RefSeq:XP_001232274.1 RefSeq:XP_420182.2 UniGene:Gga.55319
Ensembl:ENSGALT00000007868 GeneID:422187 KEGG:gga:422187
NextBio:20824856 Uniprot:E1BVF5
Length = 201
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 91/162 (56%), Positives = 119/162 (73%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAF 165
>ZFIN|ZDB-GENE-060825-293 [details] [associations]
symbol:rab9a "RAB9A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-060825-293 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EMBL:CU928125 EMBL:BC122264 IPI:IPI00635766
RefSeq:NP_001038931.1 RefSeq:NP_001229903.1 UniGene:Dr.14122
SMR:Q0P458 Ensembl:ENSDART00000066198 GeneID:751756 KEGG:dre:751756
InParanoid:Q0P458 NextBio:20917895 Uniprot:Q0P458
Length = 201
Score = 473 (171.6 bits), Expect = 5.6e-45, P = 5.6e-45
Identities = 93/182 (51%), Positives = 129/182 (70%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF TIG +F+ K+L++D + VTLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEI-ALKNEHK 186
NK+D S R V ++A EWC G PYFETSAK+ N+ AF V + +L++ H+
Sbjct: 124 NKLDV---SERQVSSEEAQEWCMESGGYPYFETSAKDATNVAVAFEEAVRRVLSLEDRHE 180
Query: 187 DI 188
+
Sbjct: 181 HL 182
>UNIPROTKB|P24408 [details] [associations]
symbol:RAB9A "Ras-related protein Rab-9A" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0019003 "GDP binding"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005770 "late endosome"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0005764 "lysosome" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 EMBL:X56386 PIR:S36187
RefSeq:NP_001183960.1 UniGene:Cfa.316 PDB:1S8F PDBsum:1S8F
ProteinModelPortal:P24408 SMR:P24408 IntAct:P24408 STRING:P24408
PRIDE:P24408 Ensembl:ENSCAFT00000018660 GeneID:403947
KEGG:cfa:403947 CTD:9367 InParanoid:P24408 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EvolutionaryTrace:P24408 NextBio:20817437
Uniprot:P24408
Length = 201
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 93/189 (49%), Positives = 127/189 (67%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKD 187
NKID S R V ++A WC G+ PYFETSAK+ N+ AF V + + D
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 188 IYYQPQGIS 196
Q +S
Sbjct: 181 HLIQTDTVS 189
>MGI|MGI:2442454 [details] [associations]
symbol:Rab9b "RAB9B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:2442454 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS CTD:51209 KO:K07900
EMBL:AK034442 EMBL:AK049693 IPI:IPI00221865 RefSeq:NP_795945.1
UniGene:Mm.44557 ProteinModelPortal:Q8BHH2 SMR:Q8BHH2
PhosphoSite:Q8BHH2 PaxDb:Q8BHH2 PRIDE:Q8BHH2
Ensembl:ENSMUST00000058814 GeneID:319642 KEGG:mmu:319642
InParanoid:Q8BHH2 NextBio:395140 Bgee:Q8BHH2 CleanEx:MM_RAB9B
Genevestigator:Q8BHH2 GermOnline:ENSMUSG00000043463 Uniprot:Q8BHH2
Length = 201
Score = 472 (171.2 bits), Expect = 7.1e-45, P = 7.1e-45
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|Q0VCB4 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS
CTD:51209 KO:K07900 OMA:CCPYFET EMBL:DAAA02071340 EMBL:BC120255
IPI:IPI00702295 RefSeq:NP_001069009.1 UniGene:Bt.25034 SMR:Q0VCB4
Ensembl:ENSBTAT00000026403 GeneID:511866 KEGG:bta:511866
InParanoid:Q0VCB4 NextBio:20870137 Uniprot:Q0VCB4
Length = 201
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQSWCMENGDYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|F1SRI1 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0005770
"late endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 GO:GO:0019003
GO:GO:0045921 GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899
OMA:LIPTDTV EMBL:CU633939 RefSeq:NP_001231676.1 UniGene:Ssc.1863
Ensembl:ENSSSCT00000013262 Ensembl:ENSSSCT00000032742
Ensembl:ENSSSCT00000032916 GeneID:100513057 KEGG:ssc:100513057
Uniprot:F1SRI1
Length = 201
Score = 471 (170.9 bits), Expect = 9.1e-45, P = 9.1e-45
Identities = 93/189 (49%), Positives = 127/189 (67%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKD 187
NKID S R V ++A WC G+ PYFETSAK+ N+ AF V + + D
Sbjct: 124 NKIDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDRAD 180
Query: 188 IYYQPQGIS 196
Q +S
Sbjct: 181 HLIQTDTVS 189
>UNIPROTKB|E2RBU0 [details] [associations]
symbol:RAB9B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104345 CTD:51209 KO:K07900 OMA:CCPYFET
EMBL:AAEX03026730 RefSeq:XP_538124.1 ProteinModelPortal:E2RBU0
PRIDE:E2RBU0 Ensembl:ENSCAFT00000028260 GeneID:481003
KEGG:cfa:481003 NextBio:20855891 Uniprot:E2RBU0
Length = 201
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|Q9NP90 [details] [associations]
symbol:RAB9B "Ras-related protein Rab-9B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0006895
"Golgi to endosome transport" evidence=NAS] [GO:0005525 "GTP
binding" evidence=NAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005575 "cellular_component" evidence=ND] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0019003 "GDP binding"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 GO:GO:0006895 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4R7VBS EMBL:AB036693 EMBL:AK313425 EMBL:AL139228
EMBL:BC093756 EMBL:BC093758 IPI:IPI00014603 RefSeq:NP_057454.1
UniGene:Hs.522736 PDB:2OCB PDBsum:2OCB ProteinModelPortal:Q9NP90
SMR:Q9NP90 IntAct:Q9NP90 PhosphoSite:Q9NP90 DMDM:13124471
PaxDb:Q9NP90 PRIDE:Q9NP90 Ensembl:ENST00000243298 GeneID:51209
KEGG:hsa:51209 UCSC:uc004ell.2 CTD:51209 GeneCards:GC0XM103077
HGNC:HGNC:14090 MIM:300285 neXtProt:NX_Q9NP90 PharmGKB:PA34153
InParanoid:Q9NP90 KO:K07900 OMA:CCPYFET PhylomeDB:Q9NP90
EvolutionaryTrace:Q9NP90 GenomeRNAi:51209 NextBio:54280 Bgee:Q9NP90
CleanEx:HS_RAB9B Genevestigator:Q9NP90 GermOnline:ENSG00000123570
Uniprot:Q9NP90
Length = 201
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|F1RYC4 [details] [associations]
symbol:LOC100525674 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104345 KO:K07900 OMA:CCPYFET
EMBL:FP102484 RefSeq:XP_003135320.1 Ensembl:ENSSSCT00000027623
Ensembl:ENSSSCT00000033325 GeneID:100525674 KEGG:ssc:100525674
Uniprot:F1RYC4
Length = 201
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|Q5R4W9 [details] [associations]
symbol:RAB9B "Ras-related protein Rab-9B" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 GeneTree:ENSGT00700000104345 OrthoDB:EOG4R7VBS
CTD:51209 KO:K07900 OMA:CCPYFET EMBL:CR861121 RefSeq:NP_001126880.1
UniGene:Pab.18539 ProteinModelPortal:Q5R4W9 PRIDE:Q5R4W9
Ensembl:ENSPPYT00000024017 GeneID:100173893 KEGG:pon:100173893
InParanoid:Q5R4W9 Uniprot:Q5R4W9
Length = 201
Score = 470 (170.5 bits), Expect = 1.2e-44, P = 1.2e-44
Identities = 89/162 (54%), Positives = 120/162 (74%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>UNIPROTKB|P51151 [details] [associations]
symbol:RAB9A "Ras-related protein Rab-9A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003924 "GTPase activity" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0045921 "positive regulation of exocytosis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
[GO:0005764 "lysosome" evidence=IDA] [GO:0005770 "late endosome"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=IDA;TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0000139
GO:GO:0005789 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 EMBL:CH471074 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:U44103
EMBL:AF498944 EMBL:CR450362 EMBL:AK290505 EMBL:BC017265
IPI:IPI00016372 PIR:G02361 RefSeq:NP_001182257.1 RefSeq:NP_004242.1
UniGene:Hs.495704 PDB:1WMS PDBsum:1WMS ProteinModelPortal:P51151
SMR:P51151 DIP:DIP-46409N STRING:P51151 PhosphoSite:P51151
DMDM:1710003 PaxDb:P51151 PeptideAtlas:P51151 PRIDE:P51151
DNASU:9367 Ensembl:ENST00000464506 GeneID:9367 KEGG:hsa:9367
UCSC:uc004cvm.3 GeneCards:GC0XP013707 HGNC:HGNC:9792 HPA:CAB016411
HPA:HPA003094 MIM:300284 neXtProt:NX_P51151 PharmGKB:PA34152
InParanoid:P51151 PhylomeDB:P51151 ChEMBL:CHEMBL1293294
EvolutionaryTrace:P51151 GenomeRNAi:9367 NextBio:35080 Bgee:P51151
CleanEx:HS_RAB9A Genevestigator:P51151 GermOnline:ENSG00000123595
Uniprot:P51151
Length = 201
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 89/165 (53%), Positives = 120/165 (72%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>UNIPROTKB|K7GKQ1 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 TIGRFAMs:TIGR00231 GeneTree:ENSGT00700000104345
EMBL:CU633939 Ensembl:ENSSSCT00000035054 Uniprot:K7GKQ1
Length = 177
Score = 469 (170.2 bits), Expect = 1.5e-44, P = 1.5e-44
Identities = 89/165 (53%), Positives = 120/165 (72%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>UNIPROTKB|Q08DW1 [details] [associations]
symbol:RAB9A "RAB9A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0045921 "positive regulation of
exocytosis" evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0005764 GO:GO:0005770 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104345 CTD:9367 KO:K07899 OMA:LIPTDTV
OrthoDB:EOG4R7VBS EMBL:DAAA02074911 UniGene:Bt.30852 EMBL:BC123543
IPI:IPI00807303 RefSeq:NP_001069006.1 SMR:Q08DW1
Ensembl:ENSBTAT00000014511 GeneID:511776 KEGG:bta:511776
InParanoid:Q08DW1 NextBio:20870093 Uniprot:Q08DW1
Length = 203
Score = 468 (169.8 bits), Expect = 1.9e-44, P = 1.9e-44
Identities = 88/165 (53%), Positives = 120/165 (72%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKVDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>RGD|619740 [details] [associations]
symbol:Rab9a "RAB9A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=IEA;ISO;ISS;TAS] [GO:0005525 "GTP binding"
evidence=IEA;ISO;ISS;TAS] [GO:0005764 "lysosome" evidence=IEA;ISO]
[GO:0005770 "late endosome" evidence=IEA;ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA;ISO;ISS]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0045335
"phagocytic vesicle" evidence=ISO;ISS] [GO:0045453 "bone
resorption" evidence=TAS] [GO:0045921 "positive regulation of
exocytosis" evidence=IEA;ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 90/189 (47%), Positives = 125/189 (66%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKD 187
NK D R V ++A WC G+ PYFETSAK+ N+ AF V I + D
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSD 180
Query: 188 IYYQPQGIS 196
Q ++
Sbjct: 181 HLIQTDTVN 189
>UNIPROTKB|Q99P75 [details] [associations]
symbol:Rab9a "Ras-related protein Rab-9A" species:10116
"Rattus norvegicus" [GO:0005764 "lysosome" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0045921 "positive regulation of exocytosis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:619740 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0045453 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045921 HOVERGEN:HBG009351 HOGENOM:HOG000233968
CTD:9367 KO:K07899 OMA:LIPTDTV OrthoDB:EOG4R7VBS EMBL:AF325692
EMBL:BC070502 IPI:IPI00200427 RefSeq:NP_445910.1 UniGene:Rn.35289
ProteinModelPortal:Q99P75 SMR:Q99P75 STRING:Q99P75 PRIDE:Q99P75
GeneID:84589 KEGG:rno:84589 UCSC:RGD:619740 InParanoid:Q99P75
NextBio:617185 Genevestigator:Q99P75 GermOnline:ENSRNOG00000030443
Uniprot:Q99P75
Length = 201
Score = 463 (168.0 bits), Expect = 6.4e-44, P = 6.4e-44
Identities = 90/189 (47%), Positives = 125/189 (66%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKD 187
NK D R V ++A WC G+ PYFETSAK+ N+ AF V I + D
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAFEEAVRRILATEDRSD 180
Query: 188 IYYQPQGIS 196
Q ++
Sbjct: 181 HLIQTDTVN 189
>MGI|MGI:1890695 [details] [associations]
symbol:Rab9 "RAB9, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005764 "lysosome" evidence=ISO]
[GO:0005768 "endosome" evidence=IEA] [GO:0005770 "late endosome"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045921 "positive regulation of exocytosis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1890695 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0045921 HOVERGEN:HBG009351 GeneTree:ENSGT00700000104345
KO:K07899 EMBL:AB027290 EMBL:AK010710 EMBL:AK017301 EMBL:AK032133
EMBL:BC008160 IPI:IPI00127820 RefSeq:NP_062747.1 UniGene:Mm.25306
PDB:1YZL PDBsum:1YZL ProteinModelPortal:Q9R0M6 SMR:Q9R0M6
STRING:Q9R0M6 PhosphoSite:Q9R0M6 PaxDb:Q9R0M6 PRIDE:Q9R0M6
Ensembl:ENSMUST00000112091 GeneID:56382 KEGG:mmu:56382 CTD:56382
InParanoid:Q9R0M6 EvolutionaryTrace:Q9R0M6 NextBio:312468
Bgee:Q9R0M6 CleanEx:MM_RAB9 Genevestigator:Q9R0M6
GermOnline:ENSMUSG00000040577 Uniprot:Q9R0M6
Length = 201
Score = 462 (167.7 bits), Expect = 8.1e-44, P = 8.1e-44
Identities = 86/165 (52%), Positives = 118/165 (71%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>UNIPROTKB|K7GPC9 [details] [associations]
symbol:RAB9A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 TIGRFAMs:TIGR00231 GeneTree:ENSGT00700000104345
EMBL:CU633939 Ensembl:ENSSSCT00000035348 Uniprot:K7GPC9
Length = 160
Score = 459 (166.6 bits), Expect = 1.7e-43, P = 1.7e-43
Identities = 87/160 (54%), Positives = 117/160 (73%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCN 168
NKID S R V ++A WC G+ PYFETSAK+ N
Sbjct: 124 NKIDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATN 160
>ZFIN|ZDB-GENE-091118-112 [details] [associations]
symbol:rab9b "RAB9B, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-091118-112 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104345 KO:K07900 OMA:CCPYFET EMBL:CR753843
IPI:IPI00802527 RefSeq:XP_001339262.1 Ensembl:ENSDART00000090681
Ensembl:ENSDART00000132117 GeneID:100003363 KEGG:dre:100003363
NextBio:20785809 Uniprot:E7F8G0
Length = 202
Score = 454 (164.9 bits), Expect = 5.7e-43, P = 5.7e-43
Identities = 88/173 (50%), Positives = 122/173 (70%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV ++F Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ ++F++L W++EF+ +D + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D + R V + +A WC G PYFETSAK+D N+ AF L +E
Sbjct: 127 DKE---EREVGEDEARAWCEENGCCPYFETSAKDDTNVGAAFEAAVREVLASE 176
>ZFIN|ZDB-GENE-040724-163 [details] [associations]
symbol:si:dkey-13a21.4 "si:dkey-13a21.4"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040724-163 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104345 EMBL:CR932000 IPI:IPI00501422
ProteinModelPortal:F1R7S8 Ensembl:ENSDART00000034569 OMA:CCLLVFD
ArrayExpress:F1R7S8 Bgee:F1R7S8 Uniprot:F1R7S8
Length = 206
Score = 453 (164.5 bits), Expect = 7.3e-43, P = 7.3e-43
Identities = 99/203 (48%), Positives = 133/203 (65%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ-IWDTAGQ 71
LK+I++G+SGVGK+S M ++V ++F+ Y+ATIG DF+TKE+ +D + V LQ IWDTAG
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQQIWDTAGT 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF SLGS+ YRGA CC+LV+DV +FE+L W++EFL QA P + A PF++LGNKI
Sbjct: 69 ERFHSLGSSLYRGAQCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKI 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL---KNEHKDI 188
D D R V KA +WC G YFE+SAKED +D+ F A AL K+ H +
Sbjct: 129 DLD---HRQVSTSKAQKWCVDIG-AEYFESSAKEDIGVDKTFHSAARAALQYLKSHHVEN 184
Query: 189 YYQPQGISETVSEVEQRGG-CAC 210
Q I+ T + +QR C C
Sbjct: 185 GGDVQ-ITNTQQDKKQRTKKCYC 206
>UNIPROTKB|C9IZZ0 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 HOGENOM:HOG000233968
HGNC:HGNC:9788 ChiTaRS:RAB7A EMBL:AC079945 EMBL:AC023598
EMBL:AC117508 EMBL:AC139617 IPI:IPI00946911
ProteinModelPortal:C9IZZ0 SMR:C9IZZ0 STRING:C9IZZ0
Ensembl:ENST00000490093 ArrayExpress:C9IZZ0 Bgee:C9IZZ0
Uniprot:C9IZZ0
Length = 116
Score = 388 (141.6 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 74/99 (74%), Positives = 85/99 (85%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNW 106
TAGQERFQSLG AFYRGADCCVLV+DV T + Q W
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNT-KRAQAW 101
Score = 79 (32.9 bits), Expect = 1.4e-42, Sum P(2) = 1.4e-42
Identities = 14/21 (66%), Positives = 16/21 (76%)
Query: 144 KKALEWCAYRGNIPYFETSAK 164
K+A WC + NIPYFETSAK
Sbjct: 96 KRAQAWCYSKNNIPYFETSAK 116
>RGD|1562617 [details] [associations]
symbol:Rab7b "Rab7b, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005764 "lysosome" evidence=IEA;ISO] [GO:0005770 "late
endosome" evidence=IEA;ISO] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0005802 "trans-Golgi network" evidence=ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032755 "positive regulation of interleukin-6 production"
evidence=ISO] [GO:0034144 "negative regulation of toll-like
receptor 4 signaling pathway" evidence=IEA] [GO:0034164 "negative
regulation of toll-like receptor 9 signaling pathway" evidence=IEA]
[GO:0034499 "late endosome to Golgi transport" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISO] [GO:0051092 "positive regulation of NF-kappaB
transcription factor activity" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:1562617 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0005764 GO:GO:0005770
EMBL:CH473958 GO:GO:0034144 GeneTree:ENSGT00700000104345 CTD:338382
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164
IPI:IPI00869695 RefSeq:NP_001102798.1 UniGene:Rn.140691
Ensembl:ENSRNOT00000009280 GeneID:501854 KEGG:rno:501854
UCSC:RGD:1562617 NextBio:710024 Uniprot:D4A7A8
Length = 199
Score = 415 (151.1 bits), Expect = 7.8e-39, P = 7.8e-39
Identities = 82/177 (46%), Positives = 124/177 (70%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A EWC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVPQEVAHEWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>UNIPROTKB|I3LRC7 [details] [associations]
symbol:LOC100627693 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0034164 "negative regulation of toll-like receptor
9 signaling pathway" evidence=IEA] [GO:0034144 "negative regulation
of toll-like receptor 4 signaling pathway" evidence=IEA]
[GO:0005770 "late endosome" evidence=IEA] [GO:0005764 "lysosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005764 GO:GO:0005770 GO:GO:0034144
GeneTree:ENSGT00700000104345 KO:K07898 OMA:LHQYVHK GO:GO:0034164
EMBL:FP565475 RefSeq:XP_003357460.1 Ensembl:ENSSSCT00000030753
GeneID:100627693 KEGG:ssc:100627693 Uniprot:I3LRC7
Length = 200
Score = 409 (149.0 bits), Expect = 3.4e-38, P = 3.4e-38
Identities = 82/177 (46%), Positives = 122/177 (68%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L+ WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLAGRAL 172
>UNIPROTKB|F1NVC7 [details] [associations]
symbol:LOC771782 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005770 "late endosome" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IEA] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345
OMA:LHQYVHK GO:GO:0034164 EMBL:AADN02044938 IPI:IPI00681453
ProteinModelPortal:F1NVC7 Ensembl:ENSGALT00000035212 Uniprot:F1NVC7
Length = 183
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 78/170 (45%), Positives = 118/170 (69%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S++ ++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA +TK + +D + L
Sbjct: 16 SMDSSKKVDLKIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVDKTPLKL 75
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L NWR++FL++ P +H+ P
Sbjct: 76 QIWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKVIPRDHDF-P 134
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
V+LGNKID R V ++ A WC + +IPYFE SAK + N+ +AF
Sbjct: 135 MVVLGNKIDL---CDRQVSKEIASAWCKEK-DIPYFEVSAKNNINVAQAF 180
>UNIPROTKB|E2RJS1 [details] [associations]
symbol:LOC488576 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IEA] [GO:0034144
"negative regulation of toll-like receptor 4 signaling pathway"
evidence=IEA] [GO:0005770 "late endosome" evidence=IEA] [GO:0005764
"lysosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0005764
GO:GO:0005770 GO:GO:0034144 GeneTree:ENSGT00700000104345 KO:K07898
OMA:LHQYVHK GO:GO:0034164 EMBL:AAEX03018265 RefSeq:XP_848668.1
ProteinModelPortal:E2RJS1 Ensembl:ENSCAFT00000016185 GeneID:488576
KEGG:cfa:488576 NextBio:20861902 Uniprot:E2RJS1
Length = 200
Score = 406 (148.0 bits), Expect = 7.0e-38, P = 7.0e-38
Identities = 82/177 (46%), Positives = 120/177 (67%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-PSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>UNIPROTKB|Q96AH8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0045335 "phagocytic
vesicle" evidence=IDA] [GO:0045654 "positive regulation of
megakaryocyte differentiation" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0051092 "positive regulation of
NF-kappaB transcription factor activity" evidence=IMP] [GO:0005770
"late endosome" evidence=IDA] [GO:0005802 "trans-Golgi network"
evidence=IDA] [GO:0034499 "late endosome to Golgi transport"
evidence=IMP] [GO:0034164 "negative regulation of toll-like
receptor 9 signaling pathway" evidence=ISS] [GO:0032755 "positive
regulation of interleukin-6 production" evidence=IMP] [GO:0005764
"lysosome" evidence=IDA] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0032755 GO:GO:0005764 GO:GO:0005770 GO:GO:0005802
GO:GO:0051092 GO:GO:0045654 PROSITE:PS51419 HOVERGEN:HBG009351
GO:GO:0034499 GO:GO:0034144 CTD:338382 KO:K07898 GO:GO:0034164
EMBL:AY094596 EMBL:BC017092 IPI:IPI00059444 RefSeq:NP_001157994.1
RefSeq:NP_796377.3 UniGene:Hs.534612 ProteinModelPortal:Q96AH8
SMR:Q96AH8 IntAct:Q96AH8 PhosphoSite:Q96AH8 DMDM:50401122
PRIDE:Q96AH8 GeneID:338382 KEGG:hsa:338382 GeneCards:GC01U901021
HGNC:HGNC:30513 neXtProt:NX_Q96AH8 PharmGKB:PA134940117
GenomeRNAi:338382 NextBio:96961 CleanEx:HS_RAB7B
Genevestigator:Q96AH8 Uniprot:Q96AH8
Length = 199
Score = 404 (147.3 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 87/204 (42%), Positives = 131/204 (64%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL +
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL-SR 174
Query: 185 HKDIYYQPQGISETVSEVEQRGGC 208
++ I S +S + R C
Sbjct: 175 YQSILENHLTESIKLSPDQSRSRC 198
>UNIPROTKB|Q08DE8 [details] [associations]
symbol:RAB7B "Ras-related protein Rab-7b" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0034144 "negative regulation of
toll-like receptor 4 signaling pathway" evidence=ISS] [GO:0032755
"positive regulation of interleukin-6 production" evidence=ISS]
[GO:0005770 "late endosome" evidence=ISS] [GO:0005794 "Golgi
apparatus" evidence=ISS] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=ISS] [GO:0045654
"positive regulation of megakaryocyte differentiation"
evidence=ISS] [GO:0034499 "late endosome to Golgi transport"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0051092 "positive regulation of NF-kappaB transcription factor
activity" evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
EMBL:BC123789 IPI:IPI00713620 RefSeq:NP_001071481.1
UniGene:Bt.11413 ProteinModelPortal:Q08DE8 STRING:Q08DE8
Ensembl:ENSBTAT00000016976 GeneID:538050 KEGG:bta:538050 CTD:338382
InParanoid:Q08DE8 KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D
NextBio:20877271 GO:GO:0034164 Uniprot:Q08DE8
Length = 200
Score = 403 (146.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 81/177 (45%), Positives = 121/177 (68%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL+++YV+ F + Y+ T+GA ++K + ++D + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L+ WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>DICTYBASE|DDB_G0287553 [details] [associations]
symbol:rab7B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0006810
"transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0287553 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GenomeReviews:CM000154_GR
EMBL:AAFI02000102 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
RefSeq:XP_637186.1 HSSP:P51151 ProteinModelPortal:Q54K69
EnsemblProtists:DDB0229399 GeneID:8626187 KEGG:ddi:DDB_G0287553
OMA:NINIEQV Uniprot:Q54K69
Length = 197
Score = 401 (146.2 bits), Expect = 2.4e-37, P = 2.4e-37
Identities = 84/204 (41%), Positives = 131/204 (64%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K R ++KV+++G+ VGKTS++ +YV +F K TIG DFV + + +VTLQ+WD
Sbjct: 3 KGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDFV----MVSENMVTLQLWD 57
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T+GQERF+SL ++YRGAD C+LV+DV +KT L+ WR++F+++ + + PF++L
Sbjct: 58 TSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIIL 117
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNKID +RVV +K A++WC GN+ YF+TSAK++ NI++ F ++ +N+
Sbjct: 118 GNKIDDP---NRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVFKHISN-QCENQP 173
Query: 186 KDIYYQP-QGISETVSEVEQRGGC 208
+ P Q IS T + Q C
Sbjct: 174 QSNEIPPEQLISLTEKKSNQSSCC 197
>MGI|MGI:2442295 [details] [associations]
symbol:5430435G22Rik "RIKEN cDNA 5430435G22 gene"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005770 "late endosome" evidence=IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0034144 "negative regulation of toll-like receptor 4 signaling
pathway" evidence=IMP] [GO:0034164 "negative regulation of
toll-like receptor 9 signaling pathway" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2442295
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 EMBL:CH466520 GO:GO:0032755 GO:GO:0005764
GO:GO:0005770 GO:GO:0005802 GO:GO:0051092 GO:GO:0045654
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351 GO:GO:0034499
GO:GO:0034144 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104345
KO:K07898 OMA:LHQYVHK OrthoDB:EOG4RNB9D GO:GO:0034164 EMBL:AB232641
EMBL:AK030688 EMBL:AK036056 EMBL:AK079999 IPI:IPI00124400
IPI:IPI00453505 RefSeq:NP_663484.1 UniGene:Mm.44508
ProteinModelPortal:Q8VEA8 SMR:Q8VEA8 STRING:Q8VEA8
PhosphoSite:Q8VEA8 PRIDE:Q8VEA8 Ensembl:ENSMUST00000064664
Ensembl:ENSMUST00000064679 GeneID:226421 KEGG:mmu:226421
UCSC:uc007cnp.1 UCSC:uc007cnq.1 InParanoid:Q0PD09 NextBio:378152
Bgee:Q8VEA8 CleanEx:MM_5430435G22RIK Genevestigator:Q8VEA8
GermOnline:ENSMUSG00000052688 Uniprot:Q8VEA8
Length = 199
Score = 396 (144.5 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 79/177 (44%), Positives = 121/177 (68%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R V Q+ WC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>UNIPROTKB|F1SPG0 [details] [associations]
symbol:RAB7A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045022 "early endosome to late endosome transport"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA] [GO:0008333
"endosome to lysosome transport" evidence=IEA] [GO:0007174
"epidermal growth factor catabolic process" evidence=IEA]
[GO:0006622 "protein targeting to lysosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005770 "late
endosome" evidence=IEA] [GO:0005764 "lysosome" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005794 GO:GO:0007264 GO:GO:0003924 GO:GO:0005764
GO:GO:0005770 GO:GO:0033365 GO:GO:0008333 GO:GO:0045022
GO:GO:0019003 GeneTree:ENSGT00700000104345 GO:GO:0007174
EMBL:CU928115 Ensembl:ENSSSCT00000012712 OMA:DRAKPPA Uniprot:F1SPG0
Length = 152
Score = 394 (143.8 bits), Expect = 1.3e-36, P = 1.3e-36
Identities = 79/138 (57%), Positives = 101/138 (73%)
Query: 60 LVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEH 119
L++ QIWDTAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P +
Sbjct: 1 LLSPQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 60
Query: 120 EACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
E PFV+LGNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A
Sbjct: 61 ENFPFVVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 117
Query: 180 ALKNEHK-DIYYQ-PQGI 195
ALK E + ++Y + P+ I
Sbjct: 118 ALKQETEVELYNEFPEPI 135
>UNIPROTKB|C9J8S3 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOGENOM:HOG000233968
HGNC:HGNC:9788 ChiTaRS:RAB7A EMBL:AC079945 EMBL:AC023598
EMBL:AC117508 EMBL:AC139617 IPI:IPI00945574
ProteinModelPortal:C9J8S3 SMR:C9J8S3 STRING:C9J8S3 PRIDE:C9J8S3
Ensembl:ENST00000482525 UCSC:uc010hsv.1 ArrayExpress:C9J8S3
Bgee:C9J8S3 Uniprot:C9J8S3
Length = 160
Score = 368 (134.6 bits), Expect = 7.4e-34, P = 7.4e-34
Identities = 72/98 (73%), Positives = 81/98 (82%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQN 105
TAGQERFQSLG AFYRGADCCVLV Q S N
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVATKRAQAWCYSKNN 101
Score = 130 (50.8 bits), Expect = 1.2e-08, P = 1.2e-08
Identities = 29/75 (38%), Positives = 45/75 (60%)
Query: 140 VVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ-PQGISE 197
+V K+A WC + NIPYFETSAKE N+++AF +A ALK E + ++Y + P+ I
Sbjct: 86 LVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKL 145
Query: 198 TVSEVEQRGG--CAC 210
++ + C+C
Sbjct: 146 DKNDRAKASAESCSC 160
>DICTYBASE|DDB_G0285051 [details] [associations]
symbol:rab32D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
dictyBase:DDB_G0285051 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GenomeReviews:CM000153_GR GO:GO:0015031
EMBL:AAFI02000073 PROSITE:PS51419 eggNOG:COG1100 KO:K07976
HSSP:P20339 RefSeq:XP_639910.1 ProteinModelPortal:Q54P07
PRIDE:Q54P07 EnsemblProtists:DDB0229426 GeneID:8624822
KEGG:ddi:DDB_G0285051 OMA:NDIITHI Uniprot:Q54P07
Length = 228
Score = 367 (134.2 bits), Expect = 9.5e-34, P = 9.5e-34
Identities = 72/186 (38%), Positives = 123/186 (66%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+NM LK+I++GD VGKTS++++ +++KF+++YK+TIGADF++K +D + +Q
Sbjct: 2 INMTETKQLKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQ 61
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFL-KQADP-GEHEAC 122
+WDTAGQE++ L SAF+R +D +LV+D++ + +F +L W ++F K +P G +
Sbjct: 62 LWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQL 121
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCA-YRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
P +LL NK D+ +R V Q + +WC ++ N+ Y+E SAK NI E+ L + E+ +
Sbjct: 122 PILLLANKSDS---LTRAVDQSEINQWCTDHKVNL-YYEVSAKSSINIKESILKLVEVII 177
Query: 182 KNEHKD 187
+ + KD
Sbjct: 178 EQD-KD 182
>UNIPROTKB|J9NUV0 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
Ensembl:ENSCAFT00000048477 Uniprot:J9NUV0
Length = 209
Score = 364 (133.2 bits), Expect = 2.0e-33, P = 2.0e-33
Identities = 82/197 (41%), Positives = 122/197 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ + Y Q
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILRKVRSNFYSQ 181
Query: 192 -PQGISETVSEVEQRGG 207
QG + ++EVE G
Sbjct: 182 GAQGHNSFLNEVETEQG 198
>ZFIN|ZDB-GENE-090821-8 [details] [associations]
symbol:rab38a "RAB38a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-090821-8 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 OrthoDB:EOG49GKHH EMBL:CABZ01044959
EMBL:CABZ01044960 EMBL:BC150365 IPI:IPI00511295 UniGene:Dr.141623
Ensembl:ENSDART00000040125 OMA:NIDEAAH Uniprot:A7E2I6
Length = 202
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 82/203 (40%), Positives = 121/203 (59%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L +D + V LQ+WD AGQ
Sbjct: 1 LYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETVRLQLWDIAGQ 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +YR A +V+DV TFE++ W+E+ + + VLL NK
Sbjct: 61 ERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLANKC 120
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D G K ++C G + +FETSAKE+ NIDEA C+ + + NE+ D+ Q
Sbjct: 121 D-QGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANEN-DLL-Q 177
Query: 192 PQGISETVSEVEQ--RGG-C-AC 210
+ +++T+S ++ RGG C AC
Sbjct: 178 SE-VADTISPQQESSRGGTCSAC 199
>FB|FBgn0032782 [details] [associations]
symbol:Rab9 "Rab9" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0042147 "retrograde
transport, endosome to Golgi" evidence=TAS] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014134 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0042147 KO:K07976
GeneTree:ENSGT00700000104345 HSSP:P32939 OMA:LIPTDTV CTD:56382
EMBL:AY071139 RefSeq:NP_609966.1 UniGene:Dm.6095 SMR:Q9VIW6
EnsemblMetazoa:FBtr0081206 GeneID:35221 KEGG:dme:Dmel_CG9994
UCSC:CG9994-RA FlyBase:FBgn0032782 InParanoid:Q9VIW6
OrthoDB:EOG43N5VP GenomeRNAi:35221 NextBio:792449 Uniprot:Q9VIW6
Length = 256
Score = 358 (131.1 bits), Expect = 8.5e-33, P = 8.5e-33
Identities = 75/190 (39%), Positives = 117/190 (61%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIPA-QKRQVSSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKD 187
E L+ +H D
Sbjct: 186 EAELR-QHGD 194
>ZFIN|ZDB-GENE-030826-30 [details] [associations]
symbol:rab13 "RAB13, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0001525 "angiogenesis" evidence=IMP] [GO:0000166 "nucleotide
binding" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-030826-30 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GO:GO:0001525 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:BX004983 EMBL:BC053195 IPI:IPI00509437
RefSeq:NP_958486.1 UniGene:Dr.20822 SMR:Q7T3A4
Ensembl:ENSDART00000046922 GeneID:373105 KEGG:dre:373105
InParanoid:Q7T3A4 NextBio:20813372 Uniprot:Q7T3A4
Length = 200
Score = 357 (130.7 bits), Expect = 1.1e-32, P = 1.1e-32
Identities = 78/200 (39%), Positives = 122/200 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF K ++++ K V LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K++E++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAGVSR----MLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + + R V K+ E A I +FETSAK N++E+F +A +I LK+ K
Sbjct: 124 DIE--AKRKV-SKETGEKLAKEHGIRFFETSAKSSINVEESFTSLARDILLKSNKKP--- 177
Query: 191 QPQGISETVSEVEQRGGCAC 210
P G ++ E++ C
Sbjct: 178 GPSGREVKLTSTEKKSSSKC 197
>UNIPROTKB|F1PTE3 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005923 "tight junction" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005923 GeneTree:ENSGT00700000104031
OMA:AMGIVLI EMBL:AAEX03005351 Ensembl:ENSCAFT00000027549
Uniprot:F1PTE3
Length = 203
Score = 355 (130.0 bits), Expect = 1.8e-32, P = 1.8e-32
Identities = 73/174 (41%), Positives = 116/174 (66%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A++ G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKVQKEQAIKLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKS 173
>RGD|620880 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0005794 "Golgi apparatus"
evidence=IEA;ISO] [GO:0005886 "plasma membrane" evidence=IEA;ISO]
[GO:0005911 "cell-cell junction" evidence=ISO] [GO:0005923 "tight
junction" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0030659 "cytoplasmic vesicle membrane"
evidence=IEA] Reactome:REACT_97881 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:620880 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0005794 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 OrthoDB:EOG4BVRVS
OMA:AMGIVLI EMBL:AF525280 EMBL:M83678 IPI:IPI00202697 PIR:D42148
RefSeq:NP_112354.1 UniGene:Rn.9819 ProteinModelPortal:P35286
SMR:P35286 IntAct:P35286 MINT:MINT-2982767 STRING:P35286
PhosphoSite:P35286 PRIDE:P35286 Ensembl:ENSRNOT00000022627
GeneID:81756 KEGG:rno:81756 UCSC:RGD:620880 InParanoid:P35286
NextBio:615526 Genevestigator:P35286 GermOnline:ENSRNOG00000016733
Uniprot:P35286
Length = 203
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 74/173 (42%), Positives = 115/173 (66%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRKVQREQA-ERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>ZFIN|ZDB-GENE-040801-62 [details] [associations]
symbol:rab35 "RAB35, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040801-62 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:11021 KO:K07876 EMBL:BC077124 IPI:IPI00919647
RefSeq:NP_001003548.1 UniGene:Dr.14855 ProteinModelPortal:Q6DEJ0
SMR:Q6DEJ0 GeneID:445154 KEGG:dre:445154 InParanoid:Q6DEJ0
NextBio:20831916 ArrayExpress:Q6DEJ0 Uniprot:Q6DEJ0
Length = 201
Score = 353 (129.3 bits), Expect = 2.9e-32, P = 2.9e-32
Identities = 75/194 (38%), Positives = 120/194 (61%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG V+VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +S+VV A ++ G I FETSAKE+ N++E F C+ E+ L+ + + +
Sbjct: 122 --NDDPNSKVVETNDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLRAKKESVAK 178
Query: 191 QPQGISETVSEVEQ 204
Q Q V +++Q
Sbjct: 179 QQQQQQNDVIKLKQ 192
>UNIPROTKB|P51153 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005923 "tight junction" evidence=IEA] [GO:0030659 "cytoplasmic
vesicle membrane" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=TAS] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0007155 "cell adhesion" evidence=TAS] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0005737 GO:GO:0007264 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0007155 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 EMBL:CH471121 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AL358472 CTD:5872 KO:K06109 OrthoDB:EOG4BVRVS EMBL:X75593
EMBL:AY423722 EMBL:AF498948 EMBL:AK291580 EMBL:BT019700
EMBL:BT019701 EMBL:BC000799 EMBL:BC009227 EMBL:BC073168
IPI:IPI00016373 PIR:A49647 RefSeq:NP_002861.1 UniGene:Hs.151536
ProteinModelPortal:P51153 SMR:P51153 IntAct:P51153 STRING:P51153
PhosphoSite:P51153 DMDM:1710016 PaxDb:P51153 PRIDE:P51153
DNASU:5872 Ensembl:ENST00000368575 GeneID:5872 KEGG:hsa:5872
UCSC:uc001fdt.1 GeneCards:GC01M153954 HGNC:HGNC:9762 HPA:HPA003996
MIM:602672 neXtProt:NX_P51153 PharmGKB:PA34103 InParanoid:P51153
OMA:AMGIVLI PhylomeDB:P51153 ChiTaRS:RAB13 GenomeRNAi:5872
NextBio:22808 ArrayExpress:P51153 Bgee:P51153 CleanEx:HS_RAB13
Genevestigator:P51153 GermOnline:ENSG00000143545 Uniprot:P51153
Length = 203
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 74/174 (42%), Positives = 114/174 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>UNIPROTKB|F1RFW5 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 CTD:5872
GeneTree:ENSGT00700000104031 KO:K06109 EMBL:CU407290
RefSeq:XP_001927266.2 UniGene:Ssc.27516 Ensembl:ENSSSCT00000007191
GeneID:100154707 KEGG:ssc:100154707 Uniprot:F1RFW5
Length = 203
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 74/174 (42%), Positives = 114/174 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>UNIPROTKB|I3L5L9 [details] [associations]
symbol:RAB13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005923 "tight junction" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0007264 GO:GO:0015031 GO:GO:0005923
GeneTree:ENSGT00700000104031 OMA:AMGIVLI EMBL:CU407290
Ensembl:ENSSSCT00000031505 Uniprot:I3L5L9
Length = 242
Score = 352 (129.0 bits), Expect = 3.7e-32, P = 3.7e-32
Identities = 74/174 (42%), Positives = 114/174 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 46 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 105
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 106 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 161
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 162 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 212
>UNIPROTKB|Q58DS5 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=IEA] [GO:0005923 "tight
junction" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:BT021522 EMBL:BC109840 IPI:IPI00687642
RefSeq:NP_001019711.1 UniGene:Bt.4127 ProteinModelPortal:Q58DS5
SMR:Q58DS5 STRING:Q58DS5 PRIDE:Q58DS5 Ensembl:ENSBTAT00000023407
GeneID:514541 KEGG:bta:514541 CTD:5872 GeneTree:ENSGT00700000104031
InParanoid:Q58DS5 KO:K06109 OrthoDB:EOG4BVRVS NextBio:20871388
Uniprot:Q58DS5
Length = 203
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 74/174 (42%), Positives = 114/174 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>MGI|MGI:1927232 [details] [associations]
symbol:Rab13 "RAB13, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005911 "cell-cell junction" evidence=IDA]
[GO:0005923 "tight junction" evidence=IDA] [GO:0006184 "GTP
catabolic process" evidence=TAS] [GO:0006810 "transport"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=TAS] [GO:0019897
"extrinsic to plasma membrane" evidence=TAS] [GO:0030054 "cell
junction" evidence=IEA] [GO:0031410 "cytoplasmic vesicle"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1927232 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0006886 GO:GO:0007264 GO:GO:0003924
GO:GO:0019897 GO:GO:0016023 GO:GO:0005923 GO:GO:0030659
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:5872 GeneTree:ENSGT00700000104031
KO:K06109 OrthoDB:EOG4BVRVS OMA:AMGIVLI EMBL:AK002303 EMBL:BC027214
IPI:IPI00121183 RefSeq:NP_080953.1 UniGene:Mm.29355
ProteinModelPortal:Q9DD03 SMR:Q9DD03 MINT:MINT-1340848
STRING:Q9DD03 PhosphoSite:Q9DD03 PaxDb:Q9DD03 PRIDE:Q9DD03
Ensembl:ENSMUST00000065418 GeneID:68328 KEGG:mmu:68328
UCSC:uc008qbn.1 InParanoid:Q9DD03 NextBio:327005 Bgee:Q9DD03
CleanEx:MM_RAB13 Genevestigator:Q9DD03
GermOnline:ENSMUSG00000027935 Uniprot:Q9DD03
Length = 202
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 74/173 (42%), Positives = 114/173 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRQVQREQA-EKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>TAIR|locus:2082269 [details] [associations]
symbol:RABA4D "RAB GTPase homolog A4D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0009860 "pollen tube growth"
evidence=RCA;IDA] [GO:0045177 "apical part of cell" evidence=IDA]
[GO:0070382 "exocytic vesicle" evidence=IDA] [GO:0048868 "pollen
tube development" evidence=IGI;RCA] [GO:0019900 "kinase binding"
evidence=IPI] [GO:0080092 "regulation of pollen tube growth"
evidence=IMP] [GO:0090404 "pollen tube tip" evidence=IDA]
[GO:0009827 "plant-type cell wall modification" evidence=RCA]
[GO:0016192 "vesicle-mediated transport" evidence=RCA] [GO:0048610
"cellular process involved in reproduction" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002686 GenomeReviews:BA000014_GR
GO:GO:0007264 EMBL:AC069473 GO:GO:0015031 GO:GO:0045177
GO:GO:0009860 GO:GO:0030659 EMBL:AP002063 PROSITE:PS51419
GO:GO:0070382 EMBL:AC069472 GO:GO:0090404 eggNOG:COG1100
GO:GO:0080092 KO:K07976 HOGENOM:HOG000233968 HSSP:P20339
EMBL:DQ056590 IPI:IPI00520600 RefSeq:NP_187823.1 UniGene:At.53275
ProteinModelPortal:Q9LH50 SMR:Q9LH50 STRING:Q9LH50 PaxDb:Q9LH50
PRIDE:Q9LH50 EnsemblPlants:AT3G12160.1 GeneID:820393
KEGG:ath:AT3G12160 TAIR:At3g12160 InParanoid:Q9LH50 OMA:RTDEDYN
PhylomeDB:Q9LH50 ProtClustDB:CLSN2684593 Genevestigator:Q9LH50
Uniprot:Q9LH50
Length = 222
Score = 351 (128.6 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 77/171 (45%), Positives = 109/171 (63%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 125 LIGNKCDL--GSLRAVPTEDAQEF-AQRENLFFMETSALEATNVETAFLTI 172
>UNIPROTKB|Q5KTJ6 [details] [associations]
symbol:RAB13 "Ras-related protein Rab-13" species:10036
"Mesocricetus auratus" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0005923 GO:GO:0030659 PROSITE:PS51419 HOVERGEN:HBG009351
HSSP:P55258 EMBL:AB158369 ProteinModelPortal:Q5KTJ6 SMR:Q5KTJ6
PRIDE:Q5KTJ6 Uniprot:Q5KTJ6
Length = 203
Score = 348 (127.6 bits), Expect = 9.8e-32, P = 9.8e-32
Identities = 73/174 (41%), Positives = 116/174 (66%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKVLKEQADKLAREHG-IRFFETSAKSSMNVDEAFNSLARDILLKS 173
>TAIR|locus:2085089 [details] [associations]
symbol:RABE1e "RAB GTPase homolog E1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0000394 "RNA splicing, via
endonucleolytic cleavage and ligation" evidence=RCA] [GO:0009086
"methionine biosynthetic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139
EMBL:AC015985 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
KO:K07976 HOGENOM:HOG000233968 HSSP:P07560 OMA:TSFFRCL
ProtClustDB:CLSN2685165 EMBL:BT024925 EMBL:AK229294 EMBL:AY084345
IPI:IPI00547488 RefSeq:NP_187601.1 UniGene:At.40023
ProteinModelPortal:Q9SF91 SMR:Q9SF91 STRING:Q9SF91 PaxDb:Q9SF91
PRIDE:Q9SF91 EnsemblPlants:AT3G09900.1 GeneID:820148
KEGG:ath:AT3G09900 TAIR:At3g09900 InParanoid:Q9SF91
PhylomeDB:Q9SF91 Genevestigator:Q9SF91 Uniprot:Q9SF91
Length = 218
Score = 347 (127.2 bits), Expect = 1.3e-31, P = 1.3e-31
Identities = 74/194 (38%), Positives = 120/194 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDSVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K + A I +FETSAK + N+++ FL +A +I + D
Sbjct: 131 DMDE-SKRAVPTSKG-QALADEYGIKFFETSAKTNQNVEQVFLSIAKDIKQRLTESDTKA 188
Query: 191 QPQGISETVSEVEQ 204
+PQGI T + +
Sbjct: 189 EPQGIKITKQDANK 202
>UNIPROTKB|F1MSJ9 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:DAAA02045445
IPI:IPI01028002 UniGene:Bt.26843 Ensembl:ENSBTAT00000029514
Uniprot:F1MSJ9
Length = 201
Score = 343 (125.8 bits), Expect = 3.3e-31, P = 3.3e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLVIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>UNIPROTKB|Q15286 [details] [associations]
symbol:RAB35 "Ras-related protein Rab-35" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005768
"endosome" evidence=IEA] [GO:0042470 "melanosome" evidence=IEA]
[GO:0016197 "endosomal transport" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0008104 "protein localization" evidence=IMP] [GO:0045171
"intercellular bridge" evidence=IDA] [GO:0005905 "coated pit"
evidence=IDA] [GO:0031253 "cell projection membrane" evidence=IDA]
[GO:0005546 "phosphatidylinositol-4,5-bisphosphate binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0008104 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
GO:GO:0005905 EMBL:CH471054 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
EMBL:AC004812 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
PDB:3TW8 PDBsum:3TW8 GO:GO:0031253 HOGENOM:HOG000233968 EMBL:X79781
EMBL:AF498960 EMBL:BT020024 EMBL:CR536486 EMBL:CR541683
EMBL:AK304620 EMBL:AK312538 EMBL:BC015931 IPI:IPI00300096
IPI:IPI00953892 PIR:JC2488 RefSeq:NP_001161078.1 RefSeq:NP_006852.1
UniGene:Hs.524788 ProteinModelPortal:Q15286 SMR:Q15286
IntAct:Q15286 MINT:MINT-1370578 STRING:Q15286 PhosphoSite:Q15286
DMDM:3024525 PaxDb:Q15286 PRIDE:Q15286 DNASU:11021
Ensembl:ENST00000229340 Ensembl:ENST00000534951 GeneID:11021
KEGG:hsa:11021 UCSC:uc001txm.2 CTD:11021 GeneCards:GC12M120532
HGNC:HGNC:9774 MIM:604199 neXtProt:NX_Q15286 PharmGKB:PA34127
InParanoid:Q15286 KO:K07876 OMA:NCDVVNR OrthoDB:EOG4QVCD5
GenomeRNAi:11021 NextBio:41874 ArrayExpress:Q15286 Bgee:Q15286
CleanEx:HS_RAB35 Genevestigator:Q15286 GermOnline:ENSG00000111737
Uniprot:Q15286
Length = 201
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>UNIPROTKB|F2Z4Z0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045334 "clathrin-coated endocytic vesicle"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0031253 "cell projection membrane" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA] [GO:0005905 "coated pit"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA]
[GO:0000910 "cytokinesis" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 GO:GO:0005905 GO:GO:0016197 GO:GO:0000910
GO:GO:0005546 GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:CU062612 RefSeq:NP_001230220.1 UniGene:Ssc.17391
UniGene:Ssc.99380 ProteinModelPortal:F2Z4Z0 SMR:F2Z4Z0 PRIDE:F2Z4Z0
Ensembl:ENSSSCT00000010847 GeneID:100151805 KEGG:ssc:100151805
Uniprot:F2Z4Z0
Length = 201
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>MGI|MGI:1924657 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0005525
"GTP binding" evidence=ISO] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=ISO]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=ISO]
[GO:0005905 "coated pit" evidence=ISO] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008104 "protein localization"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO]
[GO:0031253 "cell projection membrane" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0045171 "intercellular
bridge" evidence=ISO] [GO:0045334 "clathrin-coated endocytic
vesicle" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:1924657 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0042470 GO:GO:0007264 GO:GO:0015031 GO:GO:0005768
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003 GO:GO:0045171
HOVERGEN:HBG009351 GO:GO:0045334 GO:GO:0031253 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
OrthoDB:EOG4QVCD5 EMBL:BC056466 IPI:IPI00130489 RefSeq:NP_937806.1
UniGene:Mm.27553 ProteinModelPortal:Q6PHN9 SMR:Q6PHN9 IntAct:Q6PHN9
STRING:Q6PHN9 PhosphoSite:Q6PHN9 PaxDb:Q6PHN9 PRIDE:Q6PHN9
Ensembl:ENSMUST00000031492 GeneID:77407 KEGG:mmu:77407
InParanoid:Q6PHN9 ChiTaRS:RAB35 NextBio:346877 Bgee:Q6PHN9
CleanEx:MM_RAB35 Genevestigator:Q6PHN9
GermOnline:ENSMUSG00000029518 Uniprot:Q6PHN9
Length = 201
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>RGD|1306362 [details] [associations]
symbol:Rab35 "RAB35, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005546
"phosphatidylinositol-4,5-bisphosphate binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005768
"endosome" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0005905 "coated pit" evidence=IEA;ISO]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0008104 "protein localization" evidence=ISO]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016197
"endosomal transport" evidence=IEA;ISO] [GO:0019003 "GDP binding"
evidence=ISO;ISS] [GO:0031253 "cell projection membrane"
evidence=IEA;ISO] [GO:0042470 "melanosome" evidence=IEA]
[GO:0045171 "intercellular bridge" evidence=IEA;ISO] [GO:0045334
"clathrin-coated endocytic vesicle" evidence=IEA;ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306362 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0005905 GO:GO:0016197
GO:GO:0000910 GO:GO:0005546 PROSITE:PS51419 eggNOG:COG1100
GO:GO:0019003 GO:GO:0045171 HOVERGEN:HBG009351 GO:GO:0045334
GO:GO:0031253 HOGENOM:HOG000233968 GeneTree:ENSGT00700000104049
CTD:11021 KO:K07876 OrthoDB:EOG4QVCD5 EMBL:BC085769 IPI:IPI00371187
RefSeq:NP_001013064.1 UniGene:Rn.18008 ProteinModelPortal:Q5U316
SMR:Q5U316 STRING:Q5U316 PhosphoSite:Q5U316 PRIDE:Q5U316
Ensembl:ENSRNOT00000030031 GeneID:288700 KEGG:rno:288700
UCSC:RGD:1306362 InParanoid:Q5U316 NextBio:628573
Genevestigator:Q5U316 GermOnline:ENSRNOG00000022014 Uniprot:Q5U316
Length = 201
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 71/183 (38%), Positives = 114/183 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>TAIR|locus:2142684 [details] [associations]
symbol:RAB8C "RAB GTPase homolog 8C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005886 "plasma
membrane" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0000139 EMBL:AL162751
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOGENOM:HOG000233968
HSSP:P07560 KO:K07901 EMBL:AY035124 EMBL:AY056351 EMBL:AY087058
IPI:IPI00531864 IPI:IPI00656868 PIR:T48378 RefSeq:NP_001031827.1
RefSeq:NP_195972.1 UniGene:At.4875 ProteinModelPortal:Q9LZD4
SMR:Q9LZD4 STRING:Q9LZD4 PaxDb:Q9LZD4 PRIDE:Q9LZD4
EnsemblPlants:AT5G03520.1 GeneID:831817 KEGG:ath:AT5G03520
TAIR:At5g03520 InParanoid:Q9LZD4 OMA:DSFNTTF PhylomeDB:Q9LZD4
ProtClustDB:CLSN2685165 Genevestigator:Q9LZD4 Uniprot:Q9LZD4
Length = 216
Score = 342 (125.4 bits), Expect = 4.2e-31, P = 4.2e-31
Identities = 73/188 (38%), Positives = 117/188 (62%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDDTFTTSFITTIGIDFKIRTVELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWMKNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K + A I +FETSAK + N++ F+ +A +I + D
Sbjct: 131 DMDE-SKRAVPTAKG-QALADEYGIKFFETSAKTNLNVENVFMSIAKDIKQRLTETDTKA 188
Query: 191 QPQGISET 198
+PQGI T
Sbjct: 189 EPQGIKIT 196
>UNIPROTKB|C9J4V0 [details] [associations]
symbol:RAB7A "Ras-related protein Rab-7a" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 Pfam:PF00071 PRINTS:PR00449 GO:GO:0005525
GO:GO:0007264 HOGENOM:HOG000233968 HGNC:HGNC:9788 ChiTaRS:RAB7A
EMBL:AC079945 EMBL:AC023598 EMBL:AC117508 EMBL:AC139617
IPI:IPI00945337 ProteinModelPortal:C9J4V0 SMR:C9J4V0 STRING:C9J4V0
PRIDE:C9J4V0 Ensembl:ENST00000483906 ArrayExpress:C9J4V0
Bgee:C9J4V0 Uniprot:C9J4V0
Length = 134
Score = 228 (85.3 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 43/58 (74%), Positives = 53/58 (91%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+Q+
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQV 61
Score = 129 (50.5 bits), Expect = 4.8e-31, Sum P(2) = 4.8e-31
Identities = 29/74 (39%), Positives = 44/74 (59%)
Query: 141 VPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ-PQGISET 198
V K+A WC + NIPYFETSAKE N+++AF +A ALK E + ++Y + P+ I
Sbjct: 61 VATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLD 120
Query: 199 VSEVEQRGG--CAC 210
++ + C+C
Sbjct: 121 KNDRAKASAESCSC 134
>DICTYBASE|DDB_G0294571 [details] [associations]
symbol:DDB_G0294571 "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0005575 "cellular_component" evidence=ND]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
dictyBase:DDB_G0294571 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 eggNOG:COG1100 EMBL:AAFI02000171
ProtClustDB:CLSZ2429633 RefSeq:XP_001134507.1
ProteinModelPortal:Q1ZXB8 EnsemblProtists:DDB0233212 GeneID:8627834
KEGG:ddi:DDB_G0294571 Uniprot:Q1ZXB8
Length = 203
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 72/186 (38%), Positives = 115/186 (61%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ +LKVI LGDS VGKTSL Y+Y KF Y + DF +KEL ++++ V++ +WD
Sbjct: 3 EQKIMLKVITLGDSNVGKTSLFYNYMYGKFI--YHRSCSIDFCSKELMIENQHVSMMVWD 60
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T GQERF SLG A+YRGA C L +D++ +K+F+SL+ W ++ E+ PF+L+
Sbjct: 61 TFGQERFHSLGYAYYRGAHCYTLCFDIHNEKSFDSLEKWMDDTKTYC----FESIPFILI 116
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAY---RG---NIPYFETSAKEDCNIDEAFLCVAEIAL 181
G K D + + + + + +WC +G + YFETS+K NI E++ A++A
Sbjct: 117 GTKSDIPR-TDKSISKARIEQWCKNIEDQGIIDKVHYFETSSKLSKNITESYNAAAKLAF 175
Query: 182 KNEHKD 187
K+ +K+
Sbjct: 176 KHYNKN 181
>UNIPROTKB|A6QLS9 [details] [associations]
symbol:RAB10 "RAB10 protein" species:9913 "Bos taurus"
[GO:0072659 "protein localization to plasma membrane" evidence=IEA]
[GO:0072372 "primary cilium" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0032869 "cellular response to insulin
stimulus" evidence=IEA] [GO:0032593 "insulin-responsive
compartment" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903
OMA:WKSKCCS GeneTree:ENSGT00700000104031 EMBL:DAAA02031611
EMBL:DAAA02031612 EMBL:DAAA02031613 EMBL:BC148073 IPI:IPI00708125
RefSeq:NP_001094758.1 UniGene:Bt.103028 SMR:A6QLS9
Ensembl:ENSBTAT00000001303 GeneID:783373 KEGG:bta:783373
InParanoid:A6QLS9 NextBio:20926051 Uniprot:A6QLS9
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>UNIPROTKB|F2Z4P9 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 UniGene:Cfa.3815
NextBio:20817448 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:AAEX03010790 EMBL:AAEX03010791
RefSeq:NP_001003277.2 ProteinModelPortal:F2Z4P9 SMR:F2Z4P9
PRIDE:F2Z4P9 Ensembl:ENSCAFT00000006816 GeneID:403958
KEGG:cfa:403958 Uniprot:F2Z4P9
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>UNIPROTKB|P61026 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=IMP] [GO:0072372 "primary
cilium" evidence=IDA] [GO:0016197 "endosomal transport"
evidence=IMP] [GO:0055037 "recycling endosome" evidence=IDA]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0005768 "endosome" evidence=IDA] [GO:0032593
"insulin-responsive compartment" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0031489 "myosin V binding"
evidence=IPI] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=IMP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=IDA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0016192 "vesicle-mediated transport" evidence=ISS] [GO:0032869
"cellular response to insulin stimulus" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0006893
"Golgi to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0005525 "GTP binding"
evidence=IDA] [GO:0019003 "GDP binding" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
EMBL:CH471053 GO:GO:0030670 GO:GO:0032869 GO:GO:0016197
GO:GO:0055037 GO:GO:0007409 GO:GO:0005802 GO:GO:0072372
GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:10890 KO:K07903 EMBL:AF086917 EMBL:AF297660 EMBL:AF106681
EMBL:AL136650 EMBL:AK023223 EMBL:AF498945 EMBL:CR457303
EMBL:BC000896 IPI:IPI00016513 RefSeq:NP_057215.3 UniGene:Hs.467960
ProteinModelPortal:P61026 SMR:P61026 IntAct:P61026
MINT:MINT-1404404 STRING:P61026 PhosphoSite:P61026 DMDM:46577638
PaxDb:P61026 PeptideAtlas:P61026 PRIDE:P61026 DNASU:10890
Ensembl:ENST00000264710 GeneID:10890 KEGG:hsa:10890 UCSC:uc002rgv.3
GeneCards:GC02P026256 HGNC:HGNC:9759 HPA:HPA045611 MIM:612672
neXtProt:NX_P61026 PharmGKB:PA34100 InParanoid:P61026 OMA:WKSKCCS
PhylomeDB:P61026 ChiTaRS:RAB10 GenomeRNAi:10890 NextBio:41349
ArrayExpress:P61026 Bgee:P61026 CleanEx:HS_RAB10
Genevestigator:P61026 Uniprot:P61026
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>UNIPROTKB|F2Z5F2 [details] [associations]
symbol:RAB10 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0072372 "primary cilium" evidence=IEA]
[GO:0055037 "recycling endosome" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0031489 "myosin
V binding" evidence=IEA] [GO:0016197 "endosomal transport"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 CTD:10890 KO:K07903 OMA:WKSKCCS
GeneTree:ENSGT00700000104031 EMBL:CU571288 RefSeq:NP_001229989.1
UniGene:Ssc.5049 ProteinModelPortal:F2Z5F2 SMR:F2Z5F2 PRIDE:F2Z5F2
Ensembl:ENSSSCT00000009379 GeneID:100526104 KEGG:ssc:100526104
ArrayExpress:F2Z5F2 Uniprot:F2Z5F2
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>UNIPROTKB|Q5R5U1 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0005768
"endosome" evidence=ISS] [GO:0005789 "endoplasmic reticulum
membrane" evidence=ISS] [GO:0005794 "Golgi apparatus" evidence=ISS]
[GO:0005802 "trans-Golgi network" evidence=ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0016192 "vesicle-mediated
transport" evidence=ISS] [GO:0016197 "endosomal transport"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0032593 "insulin-responsive compartment" evidence=ISS]
[GO:0032869 "cellular response to insulin stimulus" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0045200 "establishment of neuroblast polarity"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0061467 "basolateral protein localization" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0072372 "primary cilium" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
[GO:0097051 "establishment of protein localization to endoplasmic
reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HSSP:P55258
CTD:10890 KO:K07903 EMBL:CR859178 EMBL:CR860762
RefSeq:NP_001126682.1 UniGene:Pab.18148 ProteinModelPortal:Q5R5U1
SMR:Q5R5U1 PRIDE:Q5R5U1 GeneID:100173682 KEGG:pon:100173682
InParanoid:Q5R5U1 Uniprot:Q5R5U1
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>MGI|MGI:105066 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005768 "endosome"
evidence=ISO] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO;IDA]
[GO:0005802 "trans-Golgi network" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=TAS] [GO:0006893 "Golgi to plasma membrane
transport" evidence=ISO] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=ISO] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=ISO] [GO:0016192 "vesicle-mediated
transport" evidence=IMP] [GO:0016197 "endosomal transport"
evidence=ISO] [GO:0019003 "GDP binding" evidence=ISO] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO] [GO:0032869 "cellular response to insulin stimulus"
evidence=IMP] [GO:0042995 "cell projection" evidence=IEA]
[GO:0045200 "establishment of neuroblast polarity" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=ISO]
[GO:0055037 "recycling endosome" evidence=ISO] [GO:0071782
"endoplasmic reticulum tubular network" evidence=ISO] [GO:0071786
"endoplasmic reticulum tubular network organization" evidence=ISO]
[GO:0072372 "primary cilium" evidence=ISO;IDA] [GO:0072659 "protein
localization to plasma membrane" evidence=IMP] [GO:0097051
"establishment of protein localization to endoplasmic reticulum
membrane" evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105066 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
Reactome:REACT_147847 GO:GO:0007264 GO:GO:0030670 GO:GO:0032869
GO:GO:0016197 GO:GO:0055037 GO:GO:0007409 GO:GO:0005802
GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419 GO:GO:0032593
GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 CTD:10890 KO:K07903 OMA:WKSKCCS ChiTaRS:RAB10
EMBL:AF035646 EMBL:AK008725 EMBL:AK028320 EMBL:AK087964
EMBL:BC056374 IPI:IPI00130118 RefSeq:NP_057885.1 UniGene:Mm.378993
ProteinModelPortal:P61027 SMR:P61027 IntAct:P61027 STRING:P61027
PhosphoSite:P61027 PaxDb:P61027 PRIDE:P61027
Ensembl:ENSMUST00000021001 GeneID:19325 KEGG:mmu:19325
InParanoid:P61027 NextBio:296287 Bgee:P61027 CleanEx:MM_RAB10
Genevestigator:P61027 GermOnline:ENSMUSG00000020671 Uniprot:P61027
Length = 200
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>TAIR|locus:2152753 [details] [associations]
symbol:RABA4C "RAB GTPase homolog A4C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AF218121 EMBL:AB024025 EMBL:BT024842
IPI:IPI00524205 RefSeq:NP_199607.1 UniGene:At.49142
ProteinModelPortal:Q9FE79 SMR:Q9FE79 STRING:Q9FE79 PaxDb:Q9FE79
PRIDE:Q9FE79 EnsemblPlants:AT5G47960.1 GeneID:834847
KEGG:ath:AT5G47960 TAIR:At5g47960 InParanoid:Q9FE79 OMA:QSFDHVA
PhylomeDB:Q9FE79 ProtClustDB:CLSN2916334 Genevestigator:Q9FE79
Uniprot:Q9FE79
Length = 223
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 78/192 (40%), Positives = 119/192 (61%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L+ ++ N+FS + KATIG +F T+ L++D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNE 184
L+GNK TD G+ R VP + A E+ A R N+ + ETSA + N++ +FL V EI
Sbjct: 125 LIGNK--TDLGTLRAVPTEDAKEF-AQRENLFFMETSALDSNNVEPSFLTVLTEIYRIVS 181
Query: 185 HKDIYYQPQGIS 196
K++ +G S
Sbjct: 182 KKNLVANEEGES 193
>ZFIN|ZDB-GENE-040718-304 [details] [associations]
symbol:rab10 "RAB10, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040718-304 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:10890
KO:K07903 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:CABZ01076797 EMBL:CABZ01076798 EMBL:CABZ01076799 EMBL:BC076234
IPI:IPI00486247 RefSeq:NP_001002566.1 UniGene:Dr.33795 SMR:Q6DGV5
STRING:Q6DGV5 Ensembl:ENSDART00000067776 GeneID:436839
KEGG:dre:436839 InParanoid:Q6DGV5 NextBio:20831271 Uniprot:Q6DGV5
Length = 201
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVVP+ K E A I +FETSAK + NI++AFL +AE LK K +
Sbjct: 125 DME--DKRVVPKAKG-EQIAKEHGIRFFETSAKANINIEKAFLTLAEDILK---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISTGGG 191
>ZFIN|ZDB-GENE-050522-555 [details] [associations]
symbol:rab12 "RAB12, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050522-555 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 CTD:201475 KO:K07907
GeneTree:ENSGT00700000104049 EMBL:CABZ01050277 EMBL:CABZ01050278
EMBL:CABZ01050279 EMBL:BC095608 IPI:IPI00499927
RefSeq:NP_001018466.1 UniGene:Dr.84887 SMR:Q502Q0
Ensembl:ENSDART00000127124 GeneID:553657 KEGG:dre:553657
InParanoid:Q502Q0 NextBio:20880391 Uniprot:Q502Q0
Length = 235
Score = 341 (125.1 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 70/162 (43%), Positives = 103/162 (63%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 36 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 95
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YRGA VLVYD+ Q+TFE L W +K D E +L+GNK+D
Sbjct: 96 RFNSITSAYYRGAKGIVLVYDITKQETFEDLPKW----MKMIDKYASEDAELLLVGNKLD 151
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+ S R + +++A + + + + E SAK++ N+DE FL
Sbjct: 152 CE--SDRAISRQQAERFASRISGMRFCEASAKDNFNVDEIFL 191
>UNIPROTKB|P24409 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9615
"Canis lupus familiaris" [GO:0005515 "protein binding"
evidence=IPI] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=ISS] [GO:0007409 "axonogenesis"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0030859 "polarized epithelial cell
differentiation" evidence=IMP] [GO:0043001 "Golgi to plasma
membrane protein transport" evidence=IMP] [GO:0005794 "Golgi
apparatus" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0000145 "exocyst" evidence=IDA] [GO:0072372 "primary cilium"
evidence=IDA] [GO:0061467 "basolateral protein localization"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0030670 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200
GO:GO:0030859 HOGENOM:HOG000233968 EMBL:X56387 PIR:D36364
UniGene:Cfa.3815 ProteinModelPortal:P24409 SMR:P24409 STRING:P24409
PRIDE:P24409 InParanoid:P24409 OrthoDB:EOG4K3KX6 NextBio:20817448
Uniprot:P24409
Length = 200
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 81/196 (41%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKVNINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>ZFIN|ZDB-GENE-031006-10 [details] [associations]
symbol:rab32a "RAB32a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-031006-10 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
KO:K07918 HSSP:P32939 EMBL:BC049531 IPI:IPI00484351
RefSeq:NP_958489.1 UniGene:Dr.119612 ProteinModelPortal:Q7ZW88
STRING:Q7ZW88 GeneID:378969 KEGG:dre:378969 CTD:378969
InParanoid:Q7ZW88 NextBio:20813911 ArrayExpress:Q7ZW88
Uniprot:Q7ZW88
Length = 213
Score = 340 (124.7 bits), Expect = 6.9e-31, P = 6.9e-31
Identities = 79/212 (37%), Positives = 116/212 (54%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVT 62
SV+ + L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D K LV
Sbjct: 5 SVSECKEYLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVR 64
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQ+WD AGQERF ++ +Y+ A +V+D+ TFE++ W+ + +
Sbjct: 65 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDITRGSTFEAVSKWKHDLDTKVKLANGNPI 124
Query: 123 PFVLLGNKIDT--DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
P VLL NK D DG ++ + +C G + +FETSAKE+ N+DEA + E
Sbjct: 125 PSVLLANKCDQKKDGSNNSSLMDN----FCKEAGFLGWFETSAKENINVDEAARFLVENI 180
Query: 181 LKNEHKDIYYQPQG----ISETVSEVEQRGGC 208
L N+ Y + G + + E + GC
Sbjct: 181 LLNDKGLPYEENNGDKIKLDHQTALAESKSGC 212
>FB|FBgn0016700 [details] [associations]
symbol:Rab1 "Rab1" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=TAS] [GO:0008360
"regulation of cell shape" evidence=IMP] [GO:0007015 "actin
filament organization" evidence=IMP] [GO:0007155 "cell adhesion"
evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005811 "lipid particle" evidence=IDA] [GO:0050774 "negative
regulation of dendrite morphogenesis" evidence=IMP] [GO:0031982
"vesicle" evidence=ISS] [GO:0009306 "protein secretion"
evidence=IMP] [GO:0030334 "regulation of cell migration"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0050774
GO:GO:0007264 GO:GO:0007015 GO:GO:0008360 GO:GO:0005811
GO:GO:0003924 GO:GO:0007155 GO:GO:0009306 GO:GO:0030334
eggNOG:COG1100 HOGENOM:HOG000208217 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS CTD:19324
EMBL:BT046126 EMBL:D84312 RefSeq:NP_732610.1 UniGene:Dm.2386
SMR:O18332 IntAct:O18332 MINT:MINT-990386 STRING:O18332
EnsemblMetazoa:FBtr0084104 GeneID:42524 KEGG:dme:Dmel_CG3320
UCSC:CG3320-RA FlyBase:FBgn0016700 InParanoid:O18332
OrthoDB:EOG44QRH0 GenomeRNAi:42524 NextBio:829257 Uniprot:O18332
Length = 205
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/180 (39%), Positives = 117/180 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
SVN + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD Q++F +++ W EE + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEIERYACENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+L+GNK D + +VV A E+ A G IP+ ETSAK N+++AF+ +A +KN
Sbjct: 120 -LLVGNKSDLT--TKKVVDHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAA-EIKN 174
>UNIPROTKB|F1N908 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0000910 "cytokinesis"
evidence=IEA] [GO:0005546 "phosphatidylinositol-4,5-bisphosphate
binding" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0005905 "coated pit" evidence=IEA] [GO:0016197 "endosomal
transport" evidence=IEA] [GO:0031253 "cell projection membrane"
evidence=IEA] [GO:0045171 "intercellular bridge" evidence=IEA]
[GO:0045334 "clathrin-coated endocytic vesicle" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0005905 GO:GO:0016197 GO:GO:0000910 GO:GO:0005546
GO:GO:0045171 GO:GO:0045334 GO:GO:0031253
GeneTree:ENSGT00700000104049 OMA:NCDVVNR EMBL:AADN02043195
EMBL:AADN02043196 IPI:IPI00651222 Ensembl:ENSGALT00000011828
Uniprot:F1N908
Length = 201
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 71/183 (38%), Positives = 116/183 (63%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGDYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ A + I FETSAKE+ N++E F C+ E+ L+ + +++
Sbjct: 122 --NDDPERKVVETEDAYKF-AGQMEIQLFETSAKENINVEEMFNCITELVLRAKKENLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>RGD|1559997 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0090382 "phagosome maturation" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1559997 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
CTD:10981 KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0
GeneTree:ENSGT00700000104228 EMBL:CH473994 IPI:IPI00360584
RefSeq:NP_001102372.1 UniGene:Rn.167294 Ensembl:ENSRNOT00000019121
GeneID:365042 KEGG:rno:365042 UCSC:RGD:1559997 NextBio:686539
Uniprot:D4AEG2
Length = 223
Score = 339 (124.4 bits), Expect = 8.8e-31, P = 8.8e-31
Identities = 73/177 (41%), Positives = 106/177 (59%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 20 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVRLQLWD 79
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+D++ TF+++ W+ + + P VLL
Sbjct: 80 IAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLL 139
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D SS+ Q ++C G I +FETSAK++ NIDEA + E L N+
Sbjct: 140 ANKCDQKKDSSQSPSQMN--QFCKDHGFIGWFETSAKDNINIDEATRFLVENMLANQ 194
>UNIPROTKB|P57729 [details] [associations]
symbol:RAB38 "Ras-related protein Rab-38" species:9606
"Homo sapiens" [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0042470
"melanosome" evidence=IEA] [GO:0005525 "GTP binding" evidence=NAS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=NAS] [GO:0005575 "cellular_component" evidence=ND]
[GO:0015031 "protein transport" evidence=NAS] [GO:0003924 "GTPase
activity" evidence=NAS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090383 "phagosome acidification" evidence=IMP]
[GO:0006184 "GTP catabolic process" evidence=NAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:AF235022 EMBL:BT009842
EMBL:DQ178619 EMBL:BC015808 IPI:IPI00939888 RefSeq:NP_071732.1
UniGene:Hs.591975 ProteinModelPortal:P57729 SMR:P57729
STRING:P57729 PhosphoSite:P57729 DMDM:12230516 PaxDb:P57729
PRIDE:P57729 DNASU:23682 Ensembl:ENST00000243662 GeneID:23682
KEGG:hsa:23682 UCSC:uc001pcj.2 CTD:23682 GeneCards:GC11M087846
HGNC:HGNC:9776 MIM:606281 neXtProt:NX_P57729 PharmGKB:PA34129
InParanoid:P57729 KO:K07923 OMA:TKWKNDL OrthoDB:EOG49GKHH
PhylomeDB:P57729 GenomeRNAi:23682 NextBio:46557 Bgee:P57729
CleanEx:HS_RAB38 Genevestigator:P57729 GermOnline:ENSG00000123892
Uniprot:P57729
Length = 211
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 79/206 (38%), Positives = 116/206 (56%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+DV TFE++ W+ + + + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D G + K ++C G + +FETSAKE+ NIDEA C+ + L NE D
Sbjct: 126 ANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANEC-D 183
Query: 188 IY--YQPQGISE--TVSEVEQRGGCA 209
+ +P + T ++V GCA
Sbjct: 184 LMESIEPDVVKPHLTSTKVASCSGCA 209
>UNIPROTKB|Q63483 [details] [associations]
symbol:Rab38 "Protein Rab38" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 EMBL:M94043 RGD:628752 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 EMBL:CH473956
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH HSSP:Q26000 EMBL:BC070513 IPI:IPI00209151
RefSeq:NP_665717.1 UniGene:Rn.9824 STRING:Q63483
Ensembl:ENSRNOT00000022538 GeneID:252916 KEGG:rno:252916
InParanoid:Q63483 NextBio:624045 Genevestigator:Q63483
Uniprot:Q63483
Length = 211
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 80/205 (39%), Positives = 114/205 (55%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+DV TFE++ W+ + + + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D G V K ++C G + +FETSAKE+ NIDEA C+ + L NE
Sbjct: 126 ANKCD-QGKDVLVNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANECDF 184
Query: 188 IY-YQPQGISE--TVSEVEQRGGCA 209
I +P + T +V GCA
Sbjct: 185 IESIEPDIVKPHLTSPKVVSCSGCA 209
>TAIR|locus:2168103 [details] [associations]
symbol:AT5G59840 species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0009506 "plasmodesma"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009506
EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031
EMBL:AB015475 eggNOG:COG1100 HOGENOM:HOG000233968 HSSP:P07560
KO:K07901 OMA:KCDINDK ProtClustDB:CLSN2684795 UniGene:At.29202
UniGene:At.29203 EMBL:BT004152 EMBL:BT005628 IPI:IPI00519307
RefSeq:NP_200792.1 ProteinModelPortal:Q9FJF1 SMR:Q9FJF1
STRING:Q9FJF1 PaxDb:Q9FJF1 PRIDE:Q9FJF1 EnsemblPlants:AT5G59840.1
GeneID:836105 KEGG:ath:AT5G59840 TAIR:At5g59840 InParanoid:Q9FJF1
PhylomeDB:Q9FJF1 ArrayExpress:Q9FJF1 Genevestigator:Q9FJF1
Uniprot:Q9FJF1
Length = 216
Score = 338 (124.0 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 72/196 (36%), Positives = 119/196 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D S R VP+ K + A I +FETSAK + N++E F +A+ +K D +
Sbjct: 131 DMDE-SKRAVPKSKG-QALADEYGIKFFETSAKTNLNVEEVFFSIAK-DIKQRLADTDSR 187
Query: 192 PQGISETVSEVEQRGG 207
+ + +S+ +Q G
Sbjct: 188 AEPATIKISQTDQAAG 203
>UNIPROTKB|F1PSK7 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:TKWKNDL EMBL:AAEX03012742
Ensembl:ENSCAFT00000007057 Uniprot:F1PSK7
Length = 229
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 72/177 (40%), Positives = 104/177 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 24 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 83
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+DV TFE++ W+ + + + VLL
Sbjct: 84 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 143
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D G + K ++C G + +FETSAKE+ NIDEA C+ + L NE
Sbjct: 144 ANKCD-QGKDVLINNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 199
>TAIR|locus:2084056 [details] [associations]
symbol:RAB8 "RAB GTPase homolog 8" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005829 "cytosol" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886 EMBL:CP002686
GenomeReviews:BA000014_GR GO:GO:0007264 GO:GO:0000139 GO:GO:0015031
EMBL:AL132966 PROSITE:PS51419 eggNOG:COG1100 UniGene:At.10020
HOGENOM:HOG000233968 HSSP:P07560 KO:K07901 OMA:SNVEQHA EMBL:U82434
EMBL:BT004779 EMBL:AK228083 EMBL:AK230120 EMBL:AY086756
IPI:IPI00517955 PIR:T45901 RefSeq:NP_001078278.1 RefSeq:NP_190929.1
RefSeq:NP_850696.1 ProteinModelPortal:O24466 SMR:O24466
IntAct:O24466 STRING:O24466 PaxDb:O24466 PRIDE:O24466
EnsemblPlants:AT3G53610.1 EnsemblPlants:AT3G53610.2
EnsemblPlants:AT3G53610.3 GeneID:824529 KEGG:ath:AT3G53610
TAIR:At3g53610 InParanoid:O24466 PhylomeDB:O24466
ProtClustDB:CLSN2684931 Genevestigator:O24466 Uniprot:O24466
Length = 216
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 73/197 (37%), Positives = 120/197 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDSVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP+ K + A + +FETSAK + N++E F +A +I + D
Sbjct: 131 DMDE-SKRAVPKSKG-QALADEYGMKFFETSAKTNLNVEEVFFSIAKDIKQRLADTDARA 188
Query: 191 QPQGISETVSEVEQRGG 207
+PQ I +++ +Q G
Sbjct: 189 EPQTIK--INQSDQGAG 203
>TAIR|locus:2171943 [details] [associations]
symbol:RABA1c "RAB GTPase homolog A1C" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005773 "vacuole"
evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005829 "cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0005773
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
EMBL:AB012245 KO:K07976 HOGENOM:HOG000233968 EMBL:AF370219
EMBL:AY059111 EMBL:AY084274 IPI:IPI00534558 RefSeq:NP_199387.1
UniGene:At.7538 HSSP:Q15907 ProteinModelPortal:Q9FK68 SMR:Q9FK68
PaxDb:Q9FK68 PRIDE:Q9FK68 EnsemblPlants:AT5G45750.1 GeneID:834614
KEGG:ath:AT5G45750 TAIR:At5g45750 InParanoid:Q9FK68 OMA:QKQIRDS
PhylomeDB:Q9FK68 ProtClustDB:CLSN2685455 Genevestigator:Q9FK68
Uniprot:Q9FK68
Length = 216
Score = 336 (123.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 71/174 (40%), Positives = 110/174 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +DDK++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPN----IVVMLVGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
D V Q + + A + ++ + ETSA E N++ AF AE+ + H
Sbjct: 129 DL---RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAF---AEVLTQIHH 176
>UNIPROTKB|F1NBL3 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:AADN02025319 IPI:IPI00586938 ProteinModelPortal:F1NBL3
Ensembl:ENSGALT00000020101 Uniprot:F1NBL3
Length = 227
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 74/176 (42%), Positives = 104/176 (59%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K + D K LV LQ+WD
Sbjct: 24 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVINWDSKTLVRLQLWD 83
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+DV TFE++ W+ + + P VLL
Sbjct: 84 IAGQERFGNMTRVYYKEAVGAFVVFDVTRGSTFEAVSKWKHDLDSKVLLPNGSPIPAVLL 143
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
NK D S+ + Q ++C G I +FETSAK++ NIDEA + E L N
Sbjct: 144 ANKCDQKKDGSQNLSQMD--QFCREGGFIGWFETSAKDNINIDEAARFLVENILAN 197
>UNIPROTKB|A5PJV4 [details] [associations]
symbol:RAB7L1 "RAB7L1 protein" species:9913 "Bos taurus"
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:8934 KO:K07916 OMA:GQERFIS
OrthoDB:EOG4SN1PN EMBL:DAAA02041949 EMBL:BC142252 IPI:IPI00712290
RefSeq:NP_001092564.1 UniGene:Bt.28513 Ensembl:ENSBTAT00000004192
GeneID:539000 KEGG:bta:539000 InParanoid:A5PJV4 NextBio:20877717
Uniprot:A5PJV4
Length = 203
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 73/187 (39%), Positives = 107/187 (57%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 MSLSTQG 187
>UNIPROTKB|Q3MHP2 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9913
"Bos taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0005525 "GTP binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0003924
"GTPase activity" evidence=ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 EMBL:BC105162
IPI:IPI00718152 RefSeq:NP_001030468.1 UniGene:Bt.4347
ProteinModelPortal:Q3MHP2 SMR:Q3MHP2 STRING:Q3MHP2 PRIDE:Q3MHP2
Ensembl:ENSBTAT00000003206 GeneID:532723 KEGG:bta:532723 CTD:9230
InParanoid:Q3MHP2 KO:K07905 OMA:ERSAHDE NextBio:20875786
Uniprot:Q3MHP2
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|J9JHN1 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00690000101664 CTD:9230 KO:K07905 OMA:ERSAHDE
EMBL:AAEX03012474 EMBL:AAEX03012473 RefSeq:XP_854399.2
ProteinModelPortal:J9JHN1 Ensembl:ENSCAFT00000048184 GeneID:611619
KEGG:cfa:611619 Uniprot:J9JHN1
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|B4DMK0 [details] [associations]
symbol:RAB11B "cDNA FLJ61134, highly similar to Ras-related
protein Rab-11B" species:9606 "Homo sapiens" [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 UniGene:Hs.626404
EMBL:AK297498 IPI:IPI01022454 ProteinModelPortal:B4DMK0 SMR:B4DMK0
STRING:B4DMK0 PRIDE:B4DMK0 Uniprot:B4DMK0
Length = 179
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|Q15907 [details] [associations]
symbol:RAB11B "Ras-related protein Rab-11B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IDA] [GO:0005525
"GTP binding" evidence=IDA] [GO:0003924 "GTPase activity"
evidence=IDA] [GO:0032402 "melanosome transport" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=IDA] [GO:0006184 "GTP catabolic
process" evidence=IDA;TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0016023
GO:GO:0055037 GO:GO:0007049 EMBL:CH471139 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:X79780 EMBL:AF498947 EMBL:AK312994 EMBL:BT019536
EMBL:BC110081 IPI:IPI00020436 PIR:JC2487 RefSeq:NP_004209.2
UniGene:Hs.626404 PDB:2F9L PDB:2F9M PDBsum:2F9L PDBsum:2F9M
ProteinModelPortal:Q15907 SMR:Q15907 IntAct:Q15907 STRING:Q15907
PhosphoSite:Q15907 DMDM:38258938 PaxDb:Q15907 PeptideAtlas:Q15907
PRIDE:Q15907 DNASU:9230 Ensembl:ENST00000328024 GeneID:9230
KEGG:hsa:9230 UCSC:uc002mju.4 GeneCards:GC19P008455 HGNC:HGNC:9761
MIM:604198 neXtProt:NX_Q15907 PharmGKB:PA34102 InParanoid:Q15907
PhylomeDB:Q15907 ChiTaRS:RAB11B EvolutionaryTrace:Q15907
GenomeRNAi:9230 NextBio:34597 Bgee:Q15907 CleanEx:HS_RAB11B
Genevestigator:Q15907 GermOnline:ENSG00000185236 Uniprot:Q15907
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|F2Z5J9 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0019003 "GDP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0019003 GeneTree:ENSGT00690000101664 CTD:9230
KO:K07905 OMA:ERSAHDE EMBL:FP090904 RefSeq:NP_001231804.1
UniGene:Ssc.5570 ProteinModelPortal:F2Z5J9 SMR:F2Z5J9 PRIDE:F2Z5J9
Ensembl:ENSSSCT00000014854 GeneID:100513782 KEGG:ssc:100513782
Uniprot:F2Z5J9
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>MGI|MGI:99425 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0005739 "mitochondrion" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99425 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005886 GO:GO:0007264 GO:GO:0003924 GO:GO:0016023
GO:GO:0007049 PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 GO:GO:0032402 HOVERGEN:HBG009351 GO:GO:0033572
HOGENOM:HOG000233968 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE ChiTaRS:RAB11B EMBL:L26528 EMBL:BC054753 EMBL:BC085270
IPI:IPI00135869 PIR:A55005 RefSeq:NP_033023.1 UniGene:Mm.387587
ProteinModelPortal:P46638 SMR:P46638 IntAct:P46638 STRING:P46638
PhosphoSite:P46638 PaxDb:P46638 PRIDE:P46638
Ensembl:ENSMUST00000057373 GeneID:19326 KEGG:mmu:19326
InParanoid:P46638 NextBio:296291 Bgee:P46638 CleanEx:MM_RAB11B
Genevestigator:P46638 GermOnline:ENSMUSG00000002290 GO:GO:2001135
Uniprot:P46638
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>RGD|68369 [details] [associations]
symbol:Rab11b "RAB11B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0003924 "GTPase activity" evidence=ISO;ISS]
[GO:0005525 "GTP binding" evidence=ISO;ISS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0006184 "GTP
catabolic process" evidence=ISO] [GO:0006928 "cellular component
movement" evidence=NAS] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016023 "cytoplasmic membrane-bounded vesicle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0032402 "melanosome transport"
evidence=ISS] [GO:0045335 "phagocytic vesicle" evidence=ISO;ISS]
[GO:0055037 "recycling endosome" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:68369 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 GO:GO:0006928 GO:GO:0016023 GO:GO:0055037
GO:GO:0007049 PROSITE:PS51419 eggNOG:COG1100 GO:GO:0019003
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7 CTD:9230 KO:K07905
OMA:ERSAHDE EMBL:D01046 EMBL:AF286534 EMBL:BC062041 IPI:IPI00210381
RefSeq:NP_116006.1 UniGene:Rn.124832 ProteinModelPortal:O35509
SMR:O35509 IntAct:O35509 STRING:O35509 PhosphoSite:O35509
PRIDE:O35509 Ensembl:ENSRNOT00000010197 GeneID:79434 KEGG:rno:79434
UCSC:RGD:68369 InParanoid:O35509 NextBio:614803
Genevestigator:O35509 GermOnline:ENSRNOG00000007648 Uniprot:O35509
Length = 218
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>ZFIN|ZDB-GENE-091118-91 [details] [associations]
symbol:si:ch73-173m3.3 "si:ch73-173m3.3"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-091118-91 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 EMBL:CT025910 IPI:IPI00997692
ProteinModelPortal:F1QXT5 Ensembl:ENSDART00000109719 Uniprot:F1QXT5
Length = 217
Score = 335 (123.0 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 71/179 (39%), Positives = 108/179 (60%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIW 66
++ +L KV+V+GD GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + +V LQ+W
Sbjct: 6 RKEHLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLHWDSQTVVRLQLW 65
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D AGQER+ ++ +YR A ++V+DV TF+++ W+++ + + P VL
Sbjct: 66 DIAGQERYGNMTRVYYREAVGALIVFDVTRSSTFDAVLKWKDDLDLKVSLNNGKPVPAVL 125
Query: 127 LGNKIDTDG-GSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
L NK D G +P K +C G + +FETSAKE+ NI+ A C+ + L +E
Sbjct: 126 LANKSDQSREGLCSQIP--KLDTFCKENGFVGWFETSAKENSNIEAAAKCLVDHILAHE 182
>UNIPROTKB|Q5F3R8 [details] [associations]
symbol:RAB11B "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0019003 "GDP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00690000101664 OrthoDB:EOG4RR6J7
CTD:9230 KO:K07905 OMA:ERSAHDE EMBL:AADN02063526 EMBL:AJ851582
IPI:IPI00573563 RefSeq:NP_001012569.1 UniGene:Gga.1828 SMR:Q5F3R8
STRING:Q5F3R8 Ensembl:ENSGALT00000000866 GeneID:420063
KEGG:gga:420063 InParanoid:Q5F3R8 NextBio:20823028 Uniprot:Q5F3R8
Length = 218
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|F1P9G2 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104228 OMA:GQERFIS EMBL:AAEX03018265
Ensembl:ENSCAFT00000016170 Uniprot:F1P9G2
Length = 225
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 72/187 (38%), Positives = 106/187 (56%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + F Q YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 26 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFQQHYKSTVGVDFALKVLQWSDSEMVRLQLWD 85
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A C++++DV TF + Q W+++ + E P +LL
Sbjct: 86 IAGQERFTSMTRLYYRDASACIIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 145
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 146 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 202
Query: 188 IYYQPQG 194
+ QG
Sbjct: 203 MSLSTQG 209
>UNIPROTKB|F1STR2 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07923 OMA:TKWKNDL
EMBL:FP236293 RefSeq:XP_003482633.1 Ensembl:ENSSSCT00000016279
GeneID:100621853 KEGG:ssc:100621853 Uniprot:F1STR2
Length = 211
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 72/177 (40%), Positives = 104/177 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+DV TFE++ W+ + + + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVVLL 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D G + K ++C G + +FETSAKE+ NIDEA C+ + L NE
Sbjct: 126 ANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>ZFIN|ZDB-GENE-040718-293 [details] [associations]
symbol:rab11bb "RAB11B, member RAS oncogene family,
b" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040718-293
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 GeneTree:ENSGT00690000101664 KO:K07905
OMA:ERSAHDE EMBL:AL929146 EMBL:CU469531 EMBL:BC076247
IPI:IPI00489756 RefSeq:NP_001002555.1 RefSeq:XP_003198017.1
RefSeq:XP_003198018.1 UniGene:Dr.84381 SMR:Q6DGU2 STRING:Q6DGU2
Ensembl:ENSDART00000036452 Ensembl:ENSDART00000123392
GeneID:100536606 GeneID:436828 KEGG:dre:100536606 KEGG:dre:436828
CTD:436828 InParanoid:Q6DGU2 NextBio:20831260 Uniprot:Q6DGU2
Length = 218
Score = 334 (122.6 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 67/162 (41%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>DICTYBASE|DDB_G0269174 [details] [associations]
symbol:rab1C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0269174 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AAFI02000005
GenomeReviews:CM000150_GR GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:P55258 EMBL:AB015237
RefSeq:XP_646027.1 ProteinModelPortal:O76173 SMR:O76173
PRIDE:O76173 EnsemblProtists:DDB0191203 GeneID:8616975
KEGG:ddi:DDB_G0269174 OMA:CIRTIEL Uniprot:O76173
Length = 201
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 70/166 (42%), Positives = 109/166 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLK++V+GDSGVGK+ ++ ++ N+F+ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +++YRGA ++VYD+ +F S++ W + + A P + +++GNK
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLK----LIVGNKC 148
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + S R V K A ++ A NIP ETSAKE IDEAF+ +A
Sbjct: 149 DLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLA 191
>UNIPROTKB|Q5ZIT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0097051 "establishment of protein
localization to endoplasmic reticulum membrane" evidence=ISS]
[GO:0005789 "endoplasmic reticulum membrane" evidence=ISS]
[GO:0071786 "endoplasmic reticulum tubular network organization"
evidence=ISS] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0016197 "endosomal transport" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072372 "primary cilium" evidence=ISS] [GO:0032593
"insulin-responsive compartment" evidence=ISS] [GO:0030859
"polarized epithelial cell differentiation" evidence=ISS]
[GO:0043001 "Golgi to plasma membrane protein transport"
evidence=ISS] [GO:0000145 "exocyst" evidence=ISS] [GO:0005794
"Golgi apparatus" evidence=ISS] [GO:0005802 "trans-Golgi network"
evidence=ISS] [GO:0016192 "vesicle-mediated transport"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0006893 "Golgi to plasma membrane transport"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0045200
"establishment of neuroblast polarity" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0071782 "endoplasmic reticulum tubular network" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 EMBL:AJ720699
IPI:IPI00593138 RefSeq:NP_001026268.1 UniGene:Gga.2486 HSSP:P55258
ProteinModelPortal:Q5ZIT5 SMR:Q5ZIT5 PRIDE:Q5ZIT5 GeneID:421994
KEGG:gga:421994 CTD:10890 InParanoid:Q5ZIT5 KO:K07903
NextBio:20824687 Uniprot:Q5ZIT5
Length = 200
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 79/196 (40%), Positives = 119/196 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG D K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>UNIPROTKB|J9P6H6 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 CTD:11021 KO:K07876 OMA:NCDVVNR
EMBL:AAEX03014730 EMBL:AAEX03014731 EMBL:AAEX03014732
RefSeq:XP_854240.3 Ensembl:ENSCAFT00000049240 GeneID:611477
KEGG:cfa:611477 Uniprot:J9P6H6
Length = 201
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 70/183 (38%), Positives = 113/183 (61%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGV K+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVVKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>MGI|MGI:1919683 [details] [associations]
symbol:Rab38 "RAB38, member of RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005525 "GTP binding" evidence=ISO] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005783 "endoplasmic reticulum" evidence=ISO]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005829 "cytosol"
evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006996 "organelle
organization" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0031982
"vesicle" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0060155 "platelet dense granule organization"
evidence=ISO] [GO:0090383 "phagosome acidification" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1919683
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923 OMA:TKWKNDL
OrthoDB:EOG49GKHH EMBL:AY062237 EMBL:AF448443 EMBL:AF448441
EMBL:AF448442 EMBL:AK009296 EMBL:AK044783 EMBL:AK054253
IPI:IPI00154087 RefSeq:NP_082514.4 UniGene:Mm.276669
ProteinModelPortal:Q8QZZ8 SMR:Q8QZZ8 IntAct:Q8QZZ8 STRING:Q8QZZ8
PhosphoSite:Q8QZZ8 PaxDb:Q8QZZ8 PRIDE:Q8QZZ8
Ensembl:ENSMUST00000107256 GeneID:72433 KEGG:mmu:72433
InParanoid:Q8QZZ8 NextBio:336246 Bgee:Q8QZZ8 CleanEx:MM_RAB38
Genevestigator:Q8QZZ8 GermOnline:ENSMUSG00000030559 Uniprot:Q8QZZ8
Length = 211
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 72/177 (40%), Positives = 104/177 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+DV TFE++ W+ + + + VLL
Sbjct: 66 IAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVAKWKNDLDSKLTLPNGKPVSVVLL 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D G + K ++C G + +FETSAKE+ NIDEA C+ + L NE
Sbjct: 126 ANKCD-QGKDVLMNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 181
>WB|WBGene00004284 [details] [associations]
symbol:rab-35 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:AL117202 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07876 OMA:NCDVVNR PIR:T31551
RefSeq:NP_499454.1 ProteinModelPortal:Q9U2C3 SMR:Q9U2C3
STRING:Q9U2C3 EnsemblMetazoa:Y47D3A.25.1 EnsemblMetazoa:Y47D3A.25.2
GeneID:176560 KEGG:cel:CELE_Y47D3A.25 UCSC:Y47D3A.25.2 CTD:176560
WormBase:Y47D3A.25 InParanoid:Q9U2C3 NextBio:893084
ArrayExpress:Q9U2C3 Uniprot:Q9U2C3
Length = 209
Score = 333 (122.3 bits), Expect = 3.8e-30, P = 3.8e-30
Identities = 70/171 (40%), Positives = 107/171 (62%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS+ Y TIG DF + + ++ + V LQIWDTAG
Sbjct: 9 HLFKLLIIGDSGVGKSSLLLRFADNTFSENYITTIGVDFKIRTMDINGQRVKLQIWDTAG 68
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG V+VYDV ++F +++ W +E D + VL+GNK
Sbjct: 69 QERFRTITSTYYRGTHGVVVVYDVTNGESFGNVKRWLQEIENNCDSVQK-----VLVGNK 123
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
+ + RVV + A + A NI +FETSAKED N++ F C+ + L
Sbjct: 124 CEEN--ERRVVLESDARNY-AQSMNISFFETSAKEDKNVEPMFTCITSLVL 171
>UNIPROTKB|Q13637 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0090382 "phagosome maturation" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 EMBL:U71127 EMBL:AF498958 EMBL:BT020016
EMBL:AL133539 EMBL:BC015061 EMBL:U59878 IPI:IPI00014377
RefSeq:NP_006825.1 UniGene:Hs.287714 ProteinModelPortal:Q13637
SMR:Q13637 STRING:Q13637 PhosphoSite:Q13637 DMDM:2833245
PaxDb:Q13637 PRIDE:Q13637 DNASU:10981 Ensembl:ENST00000367495
GeneID:10981 KEGG:hsa:10981 UCSC:uc003qln.1 CTD:10981
GeneCards:GC06P146906 HGNC:HGNC:9772 HPA:HPA025731 MIM:612906
neXtProt:NX_Q13637 PharmGKB:PA34123 InParanoid:Q13637 KO:K07918
OMA:FCREGGF OrthoDB:EOG4F7NM0 PhylomeDB:Q13637 GenomeRNAi:10981
NextBio:41722 Bgee:Q13637 CleanEx:HS_RAB32 Genevestigator:Q13637
GermOnline:ENSG00000118508 Uniprot:Q13637
Length = 225
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 72/176 (40%), Positives = 105/176 (59%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 81
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+D++ TFE++ W+ + + P VLL
Sbjct: 82 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSPIPAVLL 141
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
NK D + SS+ Q ++C G +FETSAK++ NI+EA + E L N
Sbjct: 142 ANKCDQNKDSSQSPSQVD--QFCKEHGFAGWFETSAKDNINIEEAARFLVEKILVN 195
>UNIPROTKB|F1S747 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 OMA:FCREGGF GeneTree:ENSGT00700000104228
EMBL:CU856012 Ensembl:ENSSSCT00000004552 Uniprot:F1S747
Length = 226
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 76/204 (37%), Positives = 112/204 (54%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 24 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 83
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A ++V+D++ TFE++ W+ + + P VLL
Sbjct: 84 IAGQERFGNMTRVYYKEAVGALVVFDISRGSTFEAVLKWKNDLDSKVHLPNGSPIPAVLL 143
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S + Q ++C G +FETSAK++ NIDEA + E L N
Sbjct: 144 ANKCDQKKDSGQNPSQMD--QFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQSF 201
Query: 188 IYYQPQG---ISETVSEVEQRGGC 208
+ G + E + E + C
Sbjct: 202 PSEENDGRIKLDEETMKKENKSQC 225
>TAIR|locus:2018698 [details] [associations]
symbol:RABA1i "RAB GTPase homolog A1I" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0009827 "plant-type
cell wall modification" evidence=RCA] [GO:0009860 "pollen tube
growth" evidence=RCA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:AC010155 EMBL:AC007508
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 ProtClustDB:CLSN2679642
EMBL:DQ056467 IPI:IPI00536131 RefSeq:NP_174177.1 UniGene:At.51281
ProteinModelPortal:Q9S810 SMR:Q9S810 PaxDb:Q9S810 PRIDE:Q9S810
EnsemblPlants:AT1G28550.1 GeneID:839755 KEGG:ath:AT1G28550
TAIR:At1g28550 InParanoid:Q9S810 OMA:HDSRATI PhylomeDB:Q9S810
Genevestigator:Q9S810 Uniprot:Q9S810
Length = 218
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 71/162 (43%), Positives = 102/162 (62%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV++ GDSGVGK++L++++ N FS +ATIG +F T+ +Q DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R + ++A + A R N + ETSA E N+D AF
Sbjct: 129 DLR--HLRAISTEEAKAF-AERENTFFMETSALEAVNVDNAF 167
>TAIR|locus:2075251 [details] [associations]
symbol:RABE1c species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0009873 "ethylene mediated signaling pathway"
evidence=IEP] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0005774 "vacuolar membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0006007 "glucose catabolic process" evidence=RCA] [GO:0042732
"D-xylose metabolic process" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005774 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0000139 GO:GO:0009873 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 EMBL:AL355775 HOGENOM:HOG000233968 OMA:WKSKCCS
KO:K07901 EMBL:D01025 EMBL:AY035132 EMBL:AY042795 EMBL:BT001952
EMBL:BT002186 IPI:IPI00518866 PIR:JS0640 RefSeq:NP_001078248.1
RefSeq:NP_001118780.1 RefSeq:NP_190192.1 UniGene:At.258
ProteinModelPortal:P28186 SMR:P28186 IntAct:P28186 STRING:P28186
PaxDb:P28186 PRIDE:P28186 EnsemblPlants:AT3G46060.1
EnsemblPlants:AT3G46060.2 EnsemblPlants:AT3G46060.3 GeneID:823749
KEGG:ath:AT3G46060 TAIR:At3g46060 InParanoid:P28186
PhylomeDB:P28186 ProtClustDB:CLSN2684795 Genevestigator:P28186
GermOnline:AT3G46060 Uniprot:P28186
Length = 216
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 73/197 (37%), Positives = 117/197 (59%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K + A I +FETSAK + N++E F + +I + D
Sbjct: 131 DMDE-SKRAVPTAKG-QALADEYGIKFFETSAKTNLNVEEVFFSIGRDIKQRLSDTDSRA 188
Query: 191 QPQGISETVSEVEQRGG 207
+P I +S+ +Q G
Sbjct: 189 EPATIK--ISQTDQAAG 203
>WB|WBGene00004266 [details] [associations]
symbol:rab-1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0018996 "molting cycle, collagen and cuticulin-based cuticle"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0048477 "oogenesis" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0008340
GO:GO:0009792 GO:GO:0006898 GO:GO:0040007 GO:GO:0006915
GO:GO:0007264 GO:GO:0002119 GO:GO:0015031 GO:GO:0018996
GO:GO:0040011 GO:GO:0048477 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 KO:K07874 OMA:NRVGPPS EMBL:FO080829
PIR:T33781 RefSeq:NP_503397.1 ProteinModelPortal:Q9UAQ6 SMR:Q9UAQ6
DIP:DIP-24638N IntAct:Q9UAQ6 MINT:MINT-1101433 STRING:Q9UAQ6
EnsemblMetazoa:C39F7.4.1 EnsemblMetazoa:C39F7.4.2 GeneID:178620
KEGG:cel:CELE_C39F7.4 UCSC:C39F7.4.1 CTD:178620 WormBase:C39F7.4
InParanoid:Q9UAQ6 NextBio:901876 ArrayExpress:Q9UAQ6 Uniprot:Q9UAQ6
Length = 205
Score = 332 (121.9 bits), Expect = 4.9e-30, P = 4.9e-30
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
++N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 AMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD+ Q+TF +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDITDQETFNNVKQWLQEIDRYACENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + R V + A ++ G IP+ ETSAK N+++AFL +A
Sbjct: 120 -LLVGNKCDLT--AKRAVETQAAQDYAGQLG-IPFLETSAKSSTNVEQAFLTMA 169
>UNIPROTKB|F1NMT5 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 OMA:WKSKCCS GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
IPI:IPI00818237 Ensembl:ENSGALT00000036791 Uniprot:F1NMT5
Length = 200
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 79/196 (40%), Positives = 119/196 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDS VGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>ZFIN|ZDB-GENE-040426-2860 [details] [associations]
symbol:rab11ba "RAB11B, member RAS oncogene
family, a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-2860
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HSSP:P35278 KO:K07905 EMBL:BC048889
IPI:IPI00509689 RefSeq:NP_999935.1 UniGene:Dr.76644
ProteinModelPortal:Q802D1 SMR:Q802D1 STRING:Q802D1 PRIDE:Q802D1
GeneID:406798 KEGG:dre:406798 CTD:406798 InParanoid:Q802D1
NextBio:20818308 ArrayExpress:Q802D1 Bgee:Q802D1 Uniprot:Q802D1
Length = 218
Score = 331 (121.6 bits), Expect = 6.2e-30, P = 6.2e-30
Identities = 66/162 (40%), Positives = 107/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L +V+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFRVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>UNIPROTKB|O14966 [details] [associations]
symbol:RAB7L1 "Ras-related protein Rab-7L1" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0015031
GO:GO:0003924 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
EMBL:AC119673 HOGENOM:HOG000233968 EMBL:D84488 EMBL:AK308359
EMBL:AK303879 EMBL:BC002585 IPI:IPI00024775 IPI:IPI00909756
IPI:IPI00913930 RefSeq:NP_001129134.1 RefSeq:NP_001129135.1
RefSeq:NP_001129136.1 RefSeq:NP_003920.1 UniGene:Hs.115325
ProteinModelPortal:O14966 SMR:O14966 DIP:DIP-31215N IntAct:O14966
STRING:O14966 PhosphoSite:O14966 PaxDb:O14966 PRIDE:O14966
DNASU:8934 Ensembl:ENST00000235932 Ensembl:ENST00000367139
Ensembl:ENST00000414729 Ensembl:ENST00000437324
Ensembl:ENST00000446390 GeneID:8934 KEGG:hsa:8934 UCSC:uc001hde.4
CTD:8934 GeneCards:GC01M205738 HGNC:HGNC:9789 HPA:CAB020822
HPA:HPA026303 MIM:603949 neXtProt:NX_O14966 PharmGKB:PA34151
InParanoid:O14966 KO:K07916 OMA:GQERFIS OrthoDB:EOG4SN1PN
PhylomeDB:O14966 ChiTaRS:RAB7L1 GenomeRNAi:8934 NextBio:33592
ArrayExpress:O14966 Bgee:O14966 CleanEx:HS_RAB7L1
Genevestigator:O14966 GermOnline:ENSG00000117280 Uniprot:O14966
Length = 203
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 72/181 (39%), Positives = 106/181 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDYEIVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E ++N +D
Sbjct: 124 ANKCDL---SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMRNSTED 180
Query: 188 I 188
I
Sbjct: 181 I 181
>MGI|MGI:1915094 [details] [associations]
symbol:Rab32 "RAB32, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IDA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0045335 "phagocytic vesicle" evidence=ISO]
[GO:0090382 "phagosome maturation" evidence=ISO] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 MGI:MGI:1915094 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981
KO:K07918 OMA:FCREGGF OrthoDB:EOG4F7NM0 EMBL:AY135650 EMBL:AK012701
EMBL:AK078874 EMBL:AK088661 EMBL:AK151543 EMBL:AK159102
EMBL:AK163620 EMBL:BC016409 EMBL:BC055945 IPI:IPI00112587
RefSeq:NP_080681.1 UniGene:Mm.31486 ProteinModelPortal:Q9CZE3
SMR:Q9CZE3 STRING:Q9CZE3 PhosphoSite:Q9CZE3 PaxDb:Q9CZE3
PRIDE:Q9CZE3 Ensembl:ENSMUST00000019974 GeneID:67844 KEGG:mmu:67844
GeneTree:ENSGT00700000104228 InParanoid:Q9CZE3 NextBio:325691
Bgee:Q9CZE3 CleanEx:MM_RAB32 Genevestigator:Q9CZE3
GermOnline:ENSMUSG00000019832 Uniprot:Q9CZE3
Length = 223
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 71/177 (40%), Positives = 105/177 (59%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 20 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 79
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+D++ TF+++ W+ + + P VLL
Sbjct: 80 IAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPIPAVLL 139
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D +S+ Q ++C G +FETSAK++ NIDEA + E L N+
Sbjct: 140 ANKCDQKKDNSQSPSQMD--QFCKDHGFTGWFETSAKDNINIDEATRFLVENMLANQ 194
>RGD|620892 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10116 "Rattus norvegicus" [GO:0003924 "GTPase activity"
evidence=TAS] [GO:0005525 "GTP binding" evidence=TAS] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620892 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 PROSITE:PS51419
HOVERGEN:HBG009351 HSSP:P51151 CTD:8934 KO:K07916 EMBL:X96663
IPI:IPI00209145 RefSeq:NP_598274.1 UniGene:Rn.4323
ProteinModelPortal:Q63481 GeneID:171122 KEGG:rno:171122
NextBio:621866 Genevestigator:Q63481 Uniprot:Q63481
Length = 204
Score = 330 (121.2 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 72/181 (39%), Positives = 105/181 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKSDL---SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSRED 180
Query: 188 I 188
I
Sbjct: 181 I 181
>ASPGD|ASPL0000062894 [details] [associations]
symbol:srgE species:162425 "Emericella nidulans"
[GO:0034498 "early endosome to Golgi transport" evidence=IEA]
[GO:0033205 "cell cycle cytokinesis" evidence=IEA] [GO:0042144
"vacuole fusion, non-autophagic" evidence=IEA] [GO:0071852
"fungal-type cell wall organization or biogenesis" evidence=IEA]
[GO:0006887 "exocytosis" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005768 "endosome" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005829 "cytosol" evidence=IEA] [GO:0005741 "mitochondrial
outer membrane" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:BN001308
GO:GO:0015031 OMA:ERSAHDE ProteinModelPortal:C8VTZ0
EnsemblFungi:CADANIAT00002359 Uniprot:C8VTZ0
Length = 210
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 76/208 (36%), Positives = 124/208 (59%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSG GK++L++++ N+F+ K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGTGKSNLLSRFTRNEFNLDSKSTIGVEFATRSIQVDSKTIKAQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD++ +T++++ W +E AD +L+GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISKHQTYDNVNRWLKELRDHADSN----IVIMLVGNKS 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEI-------ALKN 183
D R VP ++A ++ A N+ + ETSA + N++ AF + EI AL+
Sbjct: 125 DLR--HLRAVPTEEAKQF-ASENNLSFIETSALDASNVELAFQNILTEIYRIVSSKALEG 181
Query: 184 EH--KDIYYQPQGIS-ETVSEVEQRGGC 208
E + + Q I E + E +GGC
Sbjct: 182 ESGGASVGERRQIIDIEKTQDTENKGGC 209
>UNIPROTKB|Q5F470 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0019003 "GDP binding" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0055037 GO:GO:0007409
PROSITE:PS51419 GO:GO:0005932 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 HSSP:P55258
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:CDANDKR
EMBL:AJ851430 IPI:IPI00591966 RefSeq:NP_001026675.1
UniGene:Gga.16249 ProteinModelPortal:Q5F470 SMR:Q5F470 PRIDE:Q5F470
Ensembl:ENSGALT00000006368 GeneID:428352 KEGG:gga:428352
InParanoid:Q5F470 NextBio:20829370 Uniprot:Q5F470
Length = 207
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 73/189 (38%), Positives = 118/189 (62%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT + ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCALFRFSEDAFNATFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE+++NW + A P + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFENIRNWVRNIEEHASPDVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ + A G I + ETSAK + NI+ AF +A +I K + K
Sbjct: 124 DAN--DKRQVSREQGEKLAASFG-IKFMETSAKANINIENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>MGI|MGI:2385107 [details] [associations]
symbol:Rab7l1 "RAB7, member RAS oncogene family-like 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003674 "molecular_function" evidence=ND]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006810 "transport" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:2385107
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4SN1PN EMBL:BC016133 EMBL:BC029056
IPI:IPI00130361 UniGene:Mm.34027 ProteinModelPortal:Q91YQ1
SMR:Q91YQ1 STRING:Q91YQ1 PhosphoSite:Q91YQ1 PaxDb:Q91YQ1
PRIDE:Q91YQ1 InParanoid:Q91YQ1 CleanEx:MM_RAB7L1
Genevestigator:Q91YQ1 GermOnline:ENSMUSG00000026433 Uniprot:Q91YQ1
Length = 204
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 71/181 (39%), Positives = 105/181 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPSGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKSDL---SPWAVSRDQIDRFSKENGFTGWTETSVKENKNINEAMRVLVEKMMNNSRED 180
Query: 188 I 188
+
Sbjct: 181 V 181
>TAIR|locus:2057624 [details] [associations]
symbol:ArRABA1h "RAB GTPase homolog A1H" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0006944 "cellular membrane fusion" evidence=RCA] [GO:0009860
"pollen tube growth" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] [GO:0048610 "cellular process involved in
reproduction" evidence=RCA] [GO:0048868 "pollen tube development"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 EMBL:U78721 KO:K07976
HOGENOM:HOG000233968 EMBL:DQ446594 IPI:IPI00538868 PIR:F84750
RefSeq:NP_180943.4 UniGene:At.66305 ProteinModelPortal:Q1PEX3
SMR:Q1PEX3 PaxDb:Q1PEX3 PRIDE:Q1PEX3 EnsemblPlants:AT2G33870.1
GeneID:817957 KEGG:ath:AT2G33870 TAIR:At2g33870 InParanoid:P93020
OMA:ELRTHAD PhylomeDB:Q1PEX3 ProtClustDB:CLSN2679642
Genevestigator:Q1PEX3 Uniprot:Q1PEX3
Length = 218
Score = 329 (120.9 bits), Expect = 1.0e-29, P = 1.0e-29
Identities = 68/162 (41%), Positives = 104/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV++ GDSGVGK++L++++ N FS ++TIG +F T+ +Q+DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDANT----VIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R + ++ ++ A R N + ETSA E N++ AF
Sbjct: 129 DLN--HLRAISTEEVKDF-AERENTFFMETSALEAINVENAF 167
>DICTYBASE|DDB_G0277101 [details] [associations]
symbol:rab11C "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0000331 "contractile vacuole"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0277101
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 GenomeReviews:CM000151_GR GO:GO:0000331
PROSITE:PS51419 EMBL:AAFI02000019 eggNOG:COG1100 KO:K07976
HSSP:Q15907 OMA:GRIHEVV RefSeq:XP_642956.1
ProteinModelPortal:Q550H6 SMR:Q550H6 MINT:MINT-6947891 PRIDE:Q550H6
EnsemblProtists:DDB0229395 GeneID:8620825 KEGG:ddi:DDB_G0277101
Uniprot:Q550H6
Length = 224
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 64/162 (39%), Positives = 108/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDS VGK++L+N++ N+F+++ KATIG DF TK +++D+K +T Q WDTAGQ
Sbjct: 10 LFKIVIIGDSAVGKSNLLNRFTRNEFTEKTKATIGVDFGTKSIEIDNKTITAQCWDTAGQ 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S +YRGA ++VYD+ + +F+++ W E + A+ + +++GNK
Sbjct: 70 ERFRAVTSGYYRGAVGAMIVYDITSKISFKNVTRWLNELREMAE----QDILIMMVGNKS 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + SR VP K+A + A I + ETSA N++++F
Sbjct: 126 DLE--MSREVPTKEAQAF-AESNKISFLETSALNSTNVNQSF 164
>FB|FBgn0015790 [details] [associations]
symbol:Rab11 "Rab11" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0048477
"oogenesis" evidence=IMP] [GO:0005525 "GTP binding"
evidence=IEA;NAS] [GO:0007317 "regulation of pole plasm oskar mRNA
localization" evidence=IMP] [GO:0008103 "oocyte microtubule
cytoskeleton polarization" evidence=IMP] [GO:0006897 "endocytosis"
evidence=IDA;IMP] [GO:0007349 "cellularization" evidence=IMP]
[GO:0031532 "actin cytoskeleton reorganization" evidence=IMP]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0042052
"rhabdomere development" evidence=IMP] [GO:0030140 "trans-Golgi
network transport vesicle" evidence=IDA] [GO:0005813 "centrosome"
evidence=IDA] [GO:0016360 "sensory organ precursor cell fate
determination" evidence=IMP] [GO:0005768 "endosome" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0001745 "compound eye
morphogenesis" evidence=IMP] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0043195 "terminal bouton" evidence=IDA] [GO:0022416 "chaeta
development" evidence=IMP] [GO:0050807 "regulation of synapse
organization" evidence=IMP] [GO:0048749 "compound eye development"
evidence=IGI] [GO:0048599 "oocyte development" evidence=IMP]
[GO:0030723 "ovarian fusome organization" evidence=IMP] [GO:0034334
"adherens junction maintenance" evidence=IMP] [GO:0045169 "fusome"
evidence=IDA] [GO:0030718 "germ-line stem cell maintenance"
evidence=IMP] [GO:0031982 "vesicle" evidence=IDA] [GO:0060187 "cell
pole" evidence=IDA] [GO:0070732 "spindle envelope" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IMP]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0007112 "male
meiosis cytokinesis" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0005635 "nuclear envelope"
evidence=IDA] [GO:0048137 "spermatocyte division" evidence=IMP]
[GO:0032154 "cleavage furrow" evidence=IDA] [GO:0000916 "actomyosin
contractile ring contraction" evidence=IMP] [GO:0007391 "dorsal
closure" evidence=IMP] [GO:0042078 "germ-line stem cell division"
evidence=IMP] [GO:0045478 "fusome organization" evidence=IMP]
[GO:0007298 "border follicle cell migration" evidence=IMP]
[GO:0046664 "dorsal closure, amnioserosa morphology change"
evidence=IMP] [GO:0007394 "dorsal closure, elongation of leading
edge cells" evidence=IMP] [GO:2000039 "regulation of trichome
morphogenesis" evidence=IGI;IMP] [GO:0055037 "recycling endosome"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030866 "cortical actin cytoskeleton organization"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:AE014297 GO:GO:0005635
GO:GO:0048471 GO:GO:0008103 GO:GO:0007264 GO:GO:0005811
GO:GO:0015031 GO:GO:0005768 GO:GO:0003924 GO:GO:0006897
GO:GO:0043195 GO:GO:0022416 GO:GO:0031532 GO:GO:0007298
GO:GO:0000916 GO:GO:0030140 GO:GO:0016360 GO:GO:0032154
GO:GO:0019730 GO:GO:0007112 GO:GO:0030718 GO:GO:0030723
GO:GO:0007349 GO:GO:0045169 GO:GO:0048137 GO:GO:0050807
GO:GO:0042078 GO:GO:0042052 GO:GO:0007317 GO:GO:0046664
GO:GO:2000039 GO:GO:0007394 GO:GO:0034334 GO:GO:0070732
GO:GO:0048210 GO:GO:0060187 HSSP:P07560
GeneTree:ENSGT00690000101664 KO:K07904 OMA:ERSAHDE EMBL:AY070528
EMBL:AY113404 EMBL:D84315 EMBL:AB035354 RefSeq:NP_477170.1
RefSeq:NP_599137.1 UniGene:Dm.3038 SMR:O18335 IntAct:O18335
MINT:MINT-758893 STRING:O18335 EnsemblMetazoa:FBtr0084010
EnsemblMetazoa:FBtr0084011 GeneID:42501 KEGG:dme:Dmel_CG5771
UCSC:CG5771-RA CTD:42501 FlyBase:FBgn0015790 InParanoid:O18335
OrthoDB:EOG4DNCMD ChiTaRS:Rab11 GenomeRNAi:42501 NextBio:829121
Uniprot:O18335
Length = 214
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 74/193 (38%), Positives = 116/193 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +++D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIEVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W E AD + +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD----QNIVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
D R VP +A + A R + + ETSA + N++ AF + EI K I
Sbjct: 127 DLR--HLRSVPTDEA-KLFAERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRD 183
Query: 191 QPQGISETVSEVE 203
P+G S VE
Sbjct: 184 PPEGDVIRPSNVE 196
>UNIPROTKB|E1C752 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 CTD:23682 KO:K07923
OMA:TKWKNDL EMBL:AADN02004804 IPI:IPI00572853 RefSeq:XP_425653.2
ProteinModelPortal:E1C752 Ensembl:ENSGALT00000027870 GeneID:428095
KEGG:gga:428095 NextBio:20829169 Uniprot:E1C752
Length = 212
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 73/186 (39%), Positives = 109/186 (58%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
++ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+W
Sbjct: 6 QKEHLYKLLVIGDLGVGKTSIIKRYVHQNFSPHYRATIGVDFALKVLSWDAETVVRLQLW 65
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D AGQERF ++ +YR A +V+DV TFE++ W+E+ + + P VL
Sbjct: 66 DIAGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKEDLDSKLVLPNGKPVPTVL 125
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
L NK D G + K ++C G + +FETSAKE+ NI+EA C+ + + E
Sbjct: 126 LANKCD-QGIDVLMNNGIKMDQFCKENGFVGWFETSAKENININEASRCLVKHIIATESD 184
Query: 187 DIYYQP 192
+ QP
Sbjct: 185 PV--QP 188
>UNIPROTKB|Q9ULC3 [details] [associations]
symbol:RAB23 "Ras-related protein Rab-23" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0008589
"regulation of smoothened signaling pathway" evidence=IEA]
[GO:0021513 "spinal cord dorsal/ventral patterning" evidence=IEA]
[GO:0042733 "embryonic digit morphogenesis" evidence=IEA]
[GO:0045861 "negative regulation of proteolysis" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005776 "autophagic vacuole" evidence=IDA]
[GO:0000045 "autophagic vacuole assembly" evidence=IMP] [GO:0006968
"cellular defense response" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0042992 "negative regulation of transcription
factor import into nucleus" evidence=IMP] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0097094 "craniofacial suture morphogenesis"
evidence=IMP] [GO:0045335 "phagocytic vesicle" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 EMBL:CH471081
GO:GO:0015031 GO:GO:0003924 GO:GO:0005776 GO:GO:0000045
GO:GO:0045861 GO:GO:0006968 PROSITE:PS51419
Pathway_Interaction_DB:hedgehog_glipathway GO:GO:0042733
eggNOG:COG1100 EMBL:AL031321 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 EMBL:AB034244 EMBL:AB025427
EMBL:AF161486 EMBL:AF498951 EMBL:AK313796 EMBL:AY585189
EMBL:CR749371 EMBL:BC015021 IPI:IPI00008034 RefSeq:NP_057361.3
RefSeq:NP_899050.1 UniGene:Hs.555016 ProteinModelPortal:Q9ULC3
SMR:Q9ULC3 IntAct:Q9ULC3 STRING:Q9ULC3 PhosphoSite:Q9ULC3
DMDM:12643897 PaxDb:Q9ULC3 PRIDE:Q9ULC3 DNASU:51715
Ensembl:ENST00000317483 Ensembl:ENST00000468148 GeneID:51715
KEGG:hsa:51715 UCSC:uc003pds.3 CTD:51715 GeneCards:GC06M057100
HGNC:HGNC:14263 HPA:HPA029135 HPA:HPA029136 MIM:201000 MIM:606144
neXtProt:NX_Q9ULC3 Orphanet:65759 PharmGKB:PA34113
HOVERGEN:HBG100144 InParanoid:Q9ULC3 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 PhylomeDB:Q9ULC3 GenomeRNAi:51715 NextBio:55759
Bgee:Q9ULC3 CleanEx:HS_RAB23 Genevestigator:Q9ULC3
GermOnline:ENSG00000112210 GO:GO:0021513 Uniprot:Q9ULC3
Length = 237
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 69/181 (38%), Positives = 115/181 (63%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q++D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P VL+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAVSSWREKVV--AEVGD---IPTVLVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A R + ++ TS KED N++E F +AE L+ + I P
Sbjct: 125 LLDDSC--IKNEEA-EALAKRLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDP 181
Query: 193 Q 193
+
Sbjct: 182 E 182
>UNIPROTKB|F1RZV2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 KO:K06234
OMA:VTEVFKY GO:GO:0021513 EMBL:CT998546 EMBL:CT963091
RefSeq:XP_001929671.1 UniGene:Ssc.82033 Ensembl:ENSSSCT00000026804
GeneID:100155623 KEGG:ssc:100155623 Uniprot:F1RZV2
Length = 237
Score = 328 (120.5 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 68/190 (35%), Positives = 119/190 (62%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q+ D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVHDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P VL+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVV--AEVGD---VPTVLVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A + + ++ TS KED N++E F +AE L+ + I P
Sbjct: 125 LLDDSC--IKNEEA-EALAKKLKLRFYRTSVKEDLNVNEVFKYLAEKYLQKLKQQIAEDP 181
Query: 193 QGISETVSEV 202
+ + + +++
Sbjct: 182 ESMHSSSNKI 191
>FB|FBgn0262518 [details] [associations]
symbol:Rab8 "Rab8" species:7227 "Drosophila melanogaster"
[GO:0003924 "GTPase activity" evidence=ISS;NAS] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
GO:GO:0003924 eggNOG:COG1100 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104031 OMA:SNVEQHA EMBL:AY069671 EMBL:D84347
EMBL:AB112933 RefSeq:NP_001246837.1 RefSeq:NP_524172.1
UniGene:Dm.2015 SMR:O18338 MINT:MINT-864123 STRING:O18338
EnsemblMetazoa:FBtr0074921 EnsemblMetazoa:FBtr0308833 GeneID:40168
KEGG:dme:Dmel_CG8287 UCSC:CG8287-RA CTD:40168 FlyBase:FBgn0262518
InParanoid:O18338 OrthoDB:EOG4HT788 GenomeRNAi:40168 NextBio:817374
Uniprot:O18338
Length = 207
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 73/186 (39%), Positives = 118/186 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D+K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCILFRFSEDAFNTTFISTIGIDFKIRTIELDNKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE+++NW + A + +LLGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITQEKSFENIKNWIRNIEENASADVEK----MLLGNKC 123
Query: 132 D-TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHK-DI 188
+ TD R V +++ E A I + ETSAK N++EAFL +A +I K E + +
Sbjct: 124 ELTD---KRQVSKERG-EQLAIEYGIKFMETSAKASINVEEAFLTLASDIKAKTEKRMEA 179
Query: 189 YYQPQG 194
P+G
Sbjct: 180 NNPPKG 185
>UNIPROTKB|F1NI30 [details] [associations]
symbol:RAB10 "Ras-related protein Rab-10" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016197 "endosomal transport" evidence=IEA]
[GO:0031489 "myosin V binding" evidence=IEA] [GO:0032593
"insulin-responsive compartment" evidence=IEA] [GO:0032869
"cellular response to insulin stimulus" evidence=IEA] [GO:0055037
"recycling endosome" evidence=IEA] [GO:0072372 "primary cilium"
evidence=IEA] [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 IPI:IPI00593138 GeneTree:ENSGT00700000104031
EMBL:AADN02018422 EMBL:AADN02018423 EMBL:AADN02018424
EMBL:AADN02018425 EMBL:AADN02018426 EMBL:AADN02018427
Ensembl:ENSGALT00000026683 Uniprot:F1NI30
Length = 191
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 78/194 (40%), Positives = 118/194 (60%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K++++GDS VGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQER
Sbjct: 2 KLLLIGDSQVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQER 61
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
F ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK D
Sbjct: 62 FHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKCDM 117
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQ 193
+ RVVP+ K E A I +FETSAK + NI++AFL +AE L+ K +P
Sbjct: 118 E--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR---KTPVKEPN 171
Query: 194 GISETVSEVEQRGG 207
SE V ++ GG
Sbjct: 172 --SENV-DISSGGG 182
>UNIPROTKB|E2RLP0 [details] [associations]
symbol:RAB35 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 EMBL:AAEX03014730 EMBL:AAEX03014731
EMBL:AAEX03014732 Ensembl:ENSCAFT00000016115 Uniprot:E2RLP0
Length = 201
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/183 (37%), Positives = 112/183 (61%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGV K+SL+ ++ N FS TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVVKSSLLLRFADNTFSASILTTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D +VV + A ++ G I FETSAKE+ N++E F C+ E+ L+ + ++
Sbjct: 122 --NDDPERKVVETEDAYKFAGQMG-IQLFETSAKENVNVEEMFNCITELVLRAKKDNLAK 178
Query: 191 QPQ 193
Q Q
Sbjct: 179 QQQ 181
>TAIR|locus:2159285 [details] [associations]
symbol:RABA1f "RAB GTPase homolog A1F" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005829 "cytosol" evidence=RCA] [GO:0016192 "vesicle-mediated
transport" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 EMBL:CP002688
GenomeReviews:BA000015_GR GO:GO:0007264 GO:GO:0015031 EMBL:AB015472
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968
HSSP:P20339 EMBL:AK118670 EMBL:BT005238 IPI:IPI00535677
RefSeq:NP_200894.1 UniGene:At.29139 UniGene:At.50545
ProteinModelPortal:Q9FJH0 SMR:Q9FJH0 IntAct:Q9FJH0 PaxDb:Q9FJH0
PRIDE:Q9FJH0 EnsemblPlants:AT5G60860.1 GeneID:836207
KEGG:ath:AT5G60860 TAIR:At5g60860 InParanoid:Q9FJH0 OMA:IHVDDKI
PhylomeDB:Q9FJH0 ProtClustDB:CLSN2916414 Genevestigator:Q9FJH0
Uniprot:Q9FJH0
Length = 217
Score = 327 (120.2 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/162 (42%), Positives = 103/162 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D + +GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMFVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V + A + A R N + ETSA E N++ AF
Sbjct: 129 DLR--HLRAVSTEDAKAF-AERENTFFMETSALESMNVENAF 167
>DICTYBASE|DDB_G0290407 [details] [associations]
symbol:rabO "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
dictyBase:DDB_G0290407 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GenomeReviews:CM000154_GR
PROSITE:PS51419 eggNOG:COG1100 EMBL:AAFI02000163 KO:K07976
HSSP:P32939 RefSeq:XP_635724.1 ProteinModelPortal:Q54G48
EnsemblProtists:DDB0229982 GeneID:8627642 KEGG:ddi:DDB_G0290407
OMA:VACRPFP Uniprot:Q54G48
Length = 218
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 70/179 (39%), Positives = 105/179 (58%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L++V++LGD VGKT+ + +F IG DF K + +D++ V LQ+WDT GQ
Sbjct: 8 LIRVVLLGDYCVGKTTTGFVFDGKQFDFSRNCNIGVDFFVKHIVVDNQCVRLQVWDTGGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +++R CC+L + V+ QK+FE++ W ++ D + P VL+GNKI
Sbjct: 68 ERFKTITRSYFRNTSCCLLFFSVDDQKSFENIDMWYSLAFEKYDLLNY---PVVLVGNKI 124
Query: 132 DTDGGSSRVVPQKKALEWCA-------YRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
D V+ +K A EWC + +IPYFETSAK + NI+E F AE+ LKN
Sbjct: 125 DLPQ-EKHVITKKMAEEWCKNQQTKLNLKFSIPYFETSAKNNININEIFYSAAELGLKN 182
>UNIPROTKB|F1NNL7 [details] [associations]
symbol:RAB1A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005794 "Golgi
apparatus" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 CTD:5861 KO:K07874
OMA:NRVGPPS EMBL:AADN02036218 EMBL:AADN02036219 IPI:IPI00684373
RefSeq:NP_001257591.1 UniGene:Gga.34237 UniGene:Gga.37826
Ensembl:ENSGALT00000031973 GeneID:421273 KEGG:gga:421273
NextBio:20824063 ArrayExpress:F1NNL7 Uniprot:F1NNL7
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>UNIPROTKB|A1L528 [details] [associations]
symbol:RAB1A "RAB1A, member RAS oncogene family"
species:9913 "Bos taurus" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:DAAA02031452
EMBL:BT029815 IPI:IPI00829520 UniGene:Bt.49381 SMR:A1L528
Ensembl:ENSBTAT00000022227 InParanoid:A1L528 Uniprot:A1L528
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>UNIPROTKB|F1Q0H3 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:NRVGPPS EMBL:AAEX03007591
Ensembl:ENSCAFT00000005128 Uniprot:F1Q0H3
Length = 250
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 48 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 107
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 108 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 164
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 165 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 214
>UNIPROTKB|P62822 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9615
"Canis lupus familiaris" [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0007264 GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 EMBL:X56384 RefSeq:NP_001003153.1
UniGene:Cfa.26557 ProteinModelPortal:P62822 SMR:P62822
IntAct:P62822 PRIDE:P62822 Ensembl:ENSCAFT00000049414 GeneID:403774
KEGG:cfa:403774 CTD:5861 InParanoid:P62822 KO:K07874
OrthoDB:EOG48D0WM NextBio:20817273 Uniprot:P62822
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>UNIPROTKB|P62820 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0005783 "endoplasmic
reticulum" evidence=IEA] [GO:0005794 "Golgi apparatus"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
Reactome:REACT_115566 GO:GO:0007264 EMBL:CH471053
Reactome:REACT_21300 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
PROSITE:PS51419 eggNOG:COG1100 PDB:4FME PDBsum:4FME
HOVERGEN:HBG009351 PDB:2WWX PDB:3L0I PDBsum:2WWX PDBsum:3L0I
HOGENOM:HOG000233968 CTD:5861 KO:K07874 OrthoDB:EOG48D0WM
OMA:NRVGPPS EMBL:M28209 EMBL:AL050268 EMBL:BX571747 EMBL:AK055927
EMBL:AF498929 EMBL:CR533479 EMBL:BC000905 IPI:IPI00005719
IPI:IPI00185217 IPI:IPI00334174 PIR:A34323 RefSeq:NP_004152.1
RefSeq:NP_056358.1 UniGene:Hs.310645 PDB:2FOL PDB:3SFV PDB:3TKL
PDB:4FMB PDB:4FMC PDB:4FMD PDBsum:2FOL PDBsum:3SFV PDBsum:3TKL
PDBsum:4FMB PDBsum:4FMC PDBsum:4FMD ProteinModelPortal:P62820
SMR:P62820 DIP:DIP-1063N IntAct:P62820 MINT:MINT-1343792
STRING:P62820 PhosphoSite:P62820 DMDM:51338603 PaxDb:P62820
PRIDE:P62820 DNASU:5861 Ensembl:ENST00000398529
Ensembl:ENST00000409784 Ensembl:ENST00000409892 GeneID:5861
KEGG:hsa:5861 UCSC:uc002sdm.3 UCSC:uc002sdn.3 UCSC:uc002sdo.3
GeneCards:GC02M065297 HGNC:HGNC:9758 HPA:CAB005331 MIM:179508
neXtProt:NX_P62820 PharmGKB:PA34107 ChiTaRS:RAB1A
EvolutionaryTrace:P62820 GenomeRNAi:5861 NextBio:22762
ArrayExpress:P62820 Bgee:P62820 CleanEx:HS_RAB1A
Genevestigator:P62820 GermOnline:ENSG00000138069 Uniprot:P62820
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>UNIPROTKB|Q06AU5 [details] [associations]
symbol:RAB32 "Ras-related protein Rab-32" species:9823 "Sus
scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0090382
"phagosome maturation" evidence=ISS] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0007264 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:10981 KO:K07918
OrthoDB:EOG4F7NM0 EMBL:DQ917630 RefSeq:NP_001116648.1
UniGene:Ssc.56282 ProteinModelPortal:Q06AU5 GeneID:100144496
KEGG:ssc:100144496 Uniprot:Q06AU5
Length = 226
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 75/204 (36%), Positives = 111/204 (54%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 24 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 83
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A ++V+D++ FE++ W+ + + P VLL
Sbjct: 84 IAGQERFGNMTRVYYKEAVGALVVFDISRGSPFEAVLKWKNDLDSKVHLPNGSPIPAVLL 143
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S + Q ++C G +FETSAK++ NIDEA + E L N
Sbjct: 144 ANKCDQKKDSGQNPSQMD--QFCKEHGFTGWFETSAKDNINIDEAARFLVENILANHQSF 201
Query: 188 IYYQPQG---ISETVSEVEQRGGC 208
+ G + E + E + C
Sbjct: 202 PSEENDGRIKLDEETMKKENKSHC 225
>MGI|MGI:97842 [details] [associations]
symbol:Rab1 "RAB1, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000139 "Golgi membrane" evidence=ISO]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005783 "endoplasmic reticulum"
evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0006886 "intracellular
protein transport" evidence=TAS] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:97842
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794
GO:GO:0006886 GO:GO:0007264 PROSITE:PS51419 GO:GO:0006888
eggNOG:COG1100 HOVERGEN:HBG009351 KO:K07874 OMA:NRVGPPS EMBL:Y00094
EMBL:X15744 EMBL:X15745 EMBL:X15746 EMBL:X15747 EMBL:AF226873
EMBL:AK034408 EMBL:AK159425 EMBL:AK166249 EMBL:AK167150
EMBL:BC002077 IPI:IPI00114560 PIR:S05551 RefSeq:NP_033022.1
UniGene:Mm.271944 ProteinModelPortal:P62821 SMR:P62821
IntAct:P62821 STRING:P62821 PhosphoSite:P62821 PaxDb:P62821
PRIDE:P62821 Ensembl:ENSMUST00000163483 GeneID:19324 KEGG:mmu:19324
CTD:19324 InParanoid:P62821 NextBio:296283 Bgee:P62821
CleanEx:MM_RAB1 Genevestigator:P62821 GermOnline:ENSMUSG00000020149
Uniprot:P62821
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>RGD|1306867 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=ISO]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005776 "autophagic vacuole" evidence=ISO]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IEA;ISO] [GO:0015031 "protein
transport" evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral
patterning" evidence=IEA;ISO] [GO:0042733 "embryonic digit
morphogenesis" evidence=IEA;ISO] [GO:0042992 "negative regulation
of transcription factor import into nucleus" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045861
"negative regulation of proteolysis" evidence=IEA;ISO] [GO:0097094
"craniofacial suture morphogenesis" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:1306867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 EMBL:CH473965
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
OrthoDB:EOG4P2Q33 GO:GO:0021513 IPI:IPI00193952
RefSeq:NP_001102475.1 UniGene:Rn.224887 Ensembl:ENSRNOT00000016933
GeneID:367242 KEGG:rno:367242 UCSC:RGD:1306867 NextBio:690945
Uniprot:D3ZRM5
Length = 237
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 67/181 (37%), Positives = 115/181 (63%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q++D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P L+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVV--AEVGD---IPTALVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A R + ++ TS KED N++E F +AE L+ + + +P
Sbjct: 125 LLDDSC--IKNEEA-EGLAKRLKLRFYRTSVKEDLNVNEVFKYLAEKHLQKLKQQVADEP 181
Query: 193 Q 193
+
Sbjct: 182 E 182
>RGD|619736 [details] [associations]
symbol:Rab1a "RAB1A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IDA]
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IDA] [GO:0005794 "Golgi apparatus"
evidence=ISO] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0032482 "Rab protein signal transduction" evidence=IC]
[GO:0043025 "neuronal cell body" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0000139 GO:GO:0005789 GO:GO:0015031 GO:GO:0043025
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 KO:K07874 CTD:19324 EMBL:J02998 EMBL:BC066662
IPI:IPI00421897 PIR:A39963 RefSeq:NP_112352.2 UniGene:Rn.106743
ProteinModelPortal:Q6NYB7 SMR:Q6NYB7 IntAct:Q6NYB7 STRING:Q6NYB7
PhosphoSite:Q6NYB7 PRIDE:Q6NYB7 Ensembl:ENSRNOT00000006950
GeneID:81754 KEGG:rno:81754 UCSC:RGD:619736 NextBio:615518
ArrayExpress:Q6NYB7 Genevestigator:Q6NYB7
GermOnline:ENSRNOG00000004992 GO:GO:0032482 Uniprot:Q6NYB7
Length = 205
Score = 326 (119.8 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 66/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>FB|FBgn0002567 [details] [associations]
symbol:ltd "lightoid" species:7227 "Drosophila melanogaster"
[GO:0006727 "ommochrome biosynthetic process" evidence=IMP]
[GO:0006856 "eye pigment precursor transport" evidence=TAS]
[GO:0005525 "GTP binding" evidence=ISS] [GO:0007611 "learning or
memory" evidence=IMP] [GO:0008355 "olfactory learning"
evidence=IMP] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0008057 "eye
pigment granule organization" evidence=IMP] [GO:0005622
"intracellular" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 EMBL:AE013599
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0008355
GO:GO:0015031 GO:GO:0003924 GO:GO:0008057 GO:GO:0006727
GO:GO:0006856 KO:K07918 GeneTree:ENSGT00700000104228
UniGene:Dm.2179 GeneID:35940 KEGG:dme:Dmel_CG8024 CTD:35940
FlyBase:FBgn0002567 ChiTaRS:ltd GenomeRNAi:35940 NextBio:795956
RefSeq:NP_525109.1 ProteinModelPortal:A1Z7S3 SMR:A1Z7S3
STRING:A1Z7S3 PRIDE:A1Z7S3 EnsemblMetazoa:FBtr0089931
UCSC:CG8024-RB InParanoid:A1Z7S3 OMA:DTPPRER PhylomeDB:A1Z7S3
Bgee:A1Z7S3 Uniprot:A1Z7S3
Length = 686
Score = 333 (122.3 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 72/182 (39%), Positives = 105/182 (57%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVT 62
S + KR +L K++V+G+ G GKTS + +YV+ FSQ Y+ATIG DF K LQ D + +V
Sbjct: 475 STSDKREHLYKILVIGELGTGKTSFIKRYVHQFFSQNYRATIGVDFALKVLQWDANTIVR 534
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQ+WD AGQERF ++ +Y+ A +V+DV TF+ + W+E+ + +
Sbjct: 535 LQLWDIAGQERFGNMTRVYYKEAVGAFIVFDVTRSGTFDCVSKWKEDLDSKVQLPDGSPI 594
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
P +LL NK D + P+K E+ G +FETSAKE+ NIDEA + L
Sbjct: 595 PCILLANKCDQEKQGIITQPEKMD-EYVRENGFAGWFETSAKENINIDEAARALVNKILI 653
Query: 183 NE 184
N+
Sbjct: 654 ND 655
>DICTYBASE|DDB_G0272138 [details] [associations]
symbol:rab2B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0044351
"macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0272138 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GenomeReviews:CM000151_GR EMBL:AAFI02000008 PROSITE:PS51419
eggNOG:COG1100 KO:K07976 HSSP:Q15907 OMA:EEGLFFM RefSeq:XP_645208.1
ProteinModelPortal:Q559X6 SMR:Q559X6 PRIDE:Q559X6
EnsemblProtists:DDB0229402 GeneID:8618381 KEGG:ddi:DDB_G0272138
Uniprot:Q559X6
Length = 202
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 72/174 (41%), Positives = 110/174 (63%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K I++GDS VGK++L+ Q+V +F+ TIG +F ++ + ++DK + LQIWDTAG
Sbjct: 23 HLFKYIMVGDSAVGKSNLLLQFVDKRFAPNSDFTIGVEFGSRSININDKQIKLQIWDTAG 82
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLLG 128
QE+F+S+ A+YRGA C ++VYD+ + +FESL +W + K +C VL+G
Sbjct: 83 QEKFRSITRAYYRGAVCAMIVYDITRRDSFESLNSWLTDCRK------FSSCDVTTVLIG 136
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
NK D + ++R V +A E+ A + + +FETSAK N+DEAF E LK
Sbjct: 137 NKADLE--ANRQVSTSEAKEF-AEKNGLMFFETSAKTALNVDEAFEKSTEQILK 187
>UNIPROTKB|E1BA60 [details] [associations]
symbol:RAB32 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005739 "mitochondrion" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0015031 CTD:10981 KO:K07918 OMA:FCREGGF
GeneTree:ENSGT00700000104228 EMBL:DAAA02026958 EMBL:DAAA02026959
EMBL:DAAA02026960 IPI:IPI00692503 RefSeq:NP_001192879.1
UniGene:Bt.15549 Ensembl:ENSBTAT00000012905 GeneID:528099
KEGG:bta:528099 NextBio:20874738 Uniprot:E1BA60
Length = 225
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 70/174 (40%), Positives = 102/174 (58%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWDTA 69
+L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD A
Sbjct: 25 HLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWDIA 84
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERF ++ +Y+ A +V+D++ TF+++ W+ + + P VLL N
Sbjct: 85 GQERFGNMTRVYYKEAVGAFIVFDISRGSTFDAVLKWKSDLDSKVHLPNGSPIPAVLLAN 144
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
K D S + Q ++C G +FETSAK++ NIDEA + E L N
Sbjct: 145 KCDQKKDSGQTPSQMD--QFCKEHGFTGWFETSAKDNVNIDEAARFLVENILAN 196
>UNIPROTKB|E1BAI0 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045861 "negative regulation of proteolysis"
evidence=IEA] [GO:0042733 "embryonic digit morphogenesis"
evidence=IEA] [GO:0021513 "spinal cord dorsal/ventral patterning"
evidence=IEA] [GO:0008589 "regulation of smoothened signaling
pathway" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0045861
GO:GO:0042733 GO:GO:0008589 GeneTree:ENSGT00700000104457 CTD:51715
KO:K06234 OMA:VTEVFKY GO:GO:0021513 EMBL:DAAA02054803
EMBL:DAAA02054804 IPI:IPI00696030 RefSeq:NP_001193835.1
UniGene:Bt.62609 Ensembl:ENSBTAT00000007050 GeneID:618588
KEGG:bta:618588 NextBio:20901259 Uniprot:E1BAI0
Length = 237
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 67/190 (35%), Positives = 118/190 (62%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q++D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P L+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVV--AEVGD---IPTALVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A + + ++ TS KED N+ E F +AE L+ + I P
Sbjct: 125 LLDDSC--IKNEEA-EALAKKLKLRFYRTSVKEDLNVSEVFKYLAEKYLQKLKQQIAENP 181
Query: 193 QGISETVSEV 202
+ + + +++
Sbjct: 182 ESMHSSSNKI 191
>UNIPROTKB|Q6IQ22 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0000139 "Golgi
membrane" evidence=IEA] [GO:0005765 "lysosomal membrane"
evidence=IEA] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0044257 "cellular protein catabolic process"
evidence=ISS] [GO:0005764 "lysosome" evidence=ISS] [GO:0055038
"recycling endosome membrane" evidence=ISS] [GO:0019003 "GDP
binding" evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 EMBL:CH471113 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG45757M EMBL:AP001793 EMBL:BC050338 EMBL:BC071600
EMBL:BC098407 IPI:IPI00419932 RefSeq:NP_001020471.2
UniGene:Hs.270074 PDB:2IL1 PDBsum:2IL1 ProteinModelPortal:Q6IQ22
SMR:Q6IQ22 STRING:Q6IQ22 PhosphoSite:Q6IQ22 DMDM:122064944
PaxDb:Q6IQ22 PRIDE:Q6IQ22 DNASU:201475 Ensembl:ENST00000329286
GeneID:201475 KEGG:hsa:201475 UCSC:uc002knp.3 CTD:201475
GeneCards:GC18P008600 HGNC:HGNC:31332 HPA:HPA040727
neXtProt:NX_Q6IQ22 PharmGKB:PA142671102 InParanoid:Q6IQ22 KO:K07907
OMA:CEVDREI ChiTaRS:RAB12 EvolutionaryTrace:Q6IQ22
GenomeRNAi:201475 NextBio:90147 Bgee:Q6IQ22 CleanEx:HS_RAB12
Genevestigator:Q6IQ22 Uniprot:Q6IQ22
Length = 244
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 68/176 (38%), Positives = 107/176 (60%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 43 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 102
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YR A +LVYD+ ++TF+ L W +K D E +L+GNK+D
Sbjct: 103 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKW----MKMIDKYASEDAELLLVGNKLD 158
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
+ + R + +++ ++ + + E SAK++ N+DE FL + + LK DI
Sbjct: 159 CE--TDREITRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDI 212
>MGI|MGI:99833 [details] [associations]
symbol:Rab23 "RAB23, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000045 "autophagic vacuole assembly"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003924 "GTPase activity" evidence=ISO] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0005776 "autophagic vacuole" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=ISO] [GO:0006810 "transport" evidence=IEA] [GO:0006968
"cellular defense response" evidence=ISO] [GO:0007165 "signal
transduction" evidence=IMP] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007399 "nervous system
development" evidence=IMP] [GO:0008589 "regulation of smoothened
signaling pathway" evidence=IGI] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0021513
"spinal cord dorsal/ventral patterning" evidence=IGI;IMP]
[GO:0042733 "embryonic digit morphogenesis" evidence=IMP]
[GO:0042992 "negative regulation of transcription factor import
into nucleus" evidence=ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO] [GO:0045861 "negative regulation of proteolysis"
evidence=IMP] [GO:0097094 "craniofacial suture morphogenesis"
evidence=ISO] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:99833 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007165 GO:GO:0007264 GO:GO:0015031 GO:GO:0003924
GO:GO:0005776 GO:GO:0000045 GO:GO:0045861 GO:GO:0006968
GO:GO:0010008 GO:GO:0001843 PROSITE:PS51419 GO:GO:0042733
eggNOG:COG1100 GO:GO:0021904 GO:GO:0008589 GO:GO:0042992
GO:GO:0097094 HOGENOM:HOG000233968 HOVERGEN:HBG100144
OrthoDB:EOG4P2Q33 GO:GO:0021513 EMBL:Z22821 EMBL:BC025578
EMBL:M79305 IPI:IPI00116734 PIR:I48729 PIR:JH0645 UniGene:Mm.86744
PDB:1Z22 PDB:1Z2A PDBsum:1Z22 PDBsum:1Z2A ProteinModelPortal:P35288
SMR:P35288 STRING:P35288 PaxDb:P35288 PRIDE:P35288
InParanoid:P35288 EvolutionaryTrace:P35288 CleanEx:MM_RAB23
Genevestigator:P35288 GermOnline:ENSMUSG00000004768 Uniprot:P35288
Length = 237
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 68/181 (37%), Positives = 113/181 (62%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q++D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P L+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVV--AEVGD---IPTALVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A R + ++ TS KED N+ E F +AE L+ + I P
Sbjct: 125 LLDDSC--IKNEEA-EGLAKRLKLRFYRTSVKEDLNVSEVFKYLAEKHLQKLKQQITEDP 181
Query: 193 Q 193
+
Sbjct: 182 E 182
>MGI|MGI:96960 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10090
"Mus musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=ISO] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=ISO] [GO:0005932 "microtubule basal body"
evidence=IDA] [GO:0006810 "transport" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=ISO] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0007409 "axonogenesis" evidence=ISO] [GO:0014069 "postsynaptic
density" evidence=ISO] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=ISO] [GO:0019003
"GDP binding" evidence=ISO] [GO:0019901 "protein kinase binding"
evidence=ISO] [GO:0030425 "dendrite" evidence=ISO] [GO:0031513
"nonmotile primary cilium" evidence=ISO;IDA] [GO:0032880
"regulation of protein localization" evidence=ISO] [GO:0042384
"cilium assembly" evidence=ISO] [GO:0042995 "cell projection"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048210 "Golgi vesicle fusion to target membrane"
evidence=ISO] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:96960
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 Reactome:REACT_147847 GO:GO:0007264 GO:GO:0015031
GO:GO:0055037 GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932
GO:GO:0042384 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 PDB:2FU5 PDBsum:2FU5
GO:GO:0048210 HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 CTD:4218
KO:K07901 OMA:SNVEQHA EMBL:S53270 EMBL:AK076048 EMBL:AK079306
EMBL:AK080740 EMBL:BC019990 IPI:IPI00331128 RefSeq:NP_075615.2
UniGene:Mm.162811 ProteinModelPortal:P55258 SMR:P55258
IntAct:P55258 STRING:P55258 PhosphoSite:P55258 PaxDb:P55258
PRIDE:P55258 Ensembl:ENSMUST00000003121 GeneID:17274 KEGG:mmu:17274
EvolutionaryTrace:P55258 NextBio:291770 Bgee:P55258
CleanEx:MM_RAB8A Genevestigator:P55258
GermOnline:ENSMUSG00000003037 Uniprot:P55258
Length = 207
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 74/196 (37%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETVS-EVEQR 205
PQG S V VEQ+
Sbjct: 181 SPQGSSHGVKITVEQQ 196
>POMBASE|SPAC6F6.15 [details] [associations]
symbol:ypt5 "GTPase Ypt5" species:4896
"Schizosaccharomyces pombe" [GO:0003924 "GTPase activity"
evidence=ISO] [GO:0005525 "GTP binding" evidence=IDA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005770 "late endosome" evidence=ISO]
[GO:0005829 "cytosol" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006897 "endocytosis" evidence=ISO] [GO:0006995
"cellular response to nitrogen starvation" evidence=IMP]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IC] [GO:0031338 "regulation of vesicle fusion"
evidence=IMP] [GO:0033157 "regulation of intracellular protein
transport" evidence=IC] [GO:0070314 "G1 to G0 transition"
evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC6F6.15 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0007264 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0015031 GO:GO:0003924 GO:GO:0006897
GO:GO:0005770 PROSITE:PS51419 GO:GO:0006995 eggNOG:COG1100
GO:GO:0070314 KO:K07976 GO:GO:0033157 HOGENOM:HOG000233968
OMA:GTQGKIC GO:GO:0031338 OrthoDB:EOG4S1XHJ EMBL:Z22220 PIR:A47733
PIR:S34729 RefSeq:NP_593907.1 ProteinModelPortal:P36586 SMR:P36586
STRING:P36586 PRIDE:P36586 EnsemblFungi:SPAC6F6.15.1 GeneID:2542248
KEGG:spo:SPAC6F6.15 NextBio:20803313 Uniprot:P36586
Length = 211
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 74/202 (36%), Positives = 118/202 (58%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL-VTLQIWDTAGQE 72
K+++LGDS VGK+SL+ ++V ++F ++TIGA F+T+ L +D+ V L+IWDTAGQE
Sbjct: 16 KLVLLGDSAVGKSSLVLRFVKDQFDDYRESTIGAAFLTQTLPIDENTSVKLEIWDTAGQE 75
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
R++SL +YR A+C ++VYD+ + E ++W +E +QA P E L GNK+D
Sbjct: 76 RYKSLAPMYYRNANCAIVVYDITQAASLEKAKSWIKELQRQA-P---EGIVIALAGNKLD 131
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE-IALK---NEHKDI 188
R +K E A N+ +FETSAK N++E F +A+ + L+ N+ +
Sbjct: 132 L--AQERRAVEKADAEAYAAEANLLFFETSAKTAENVNELFTAIAKKLPLEDKLNQARGA 189
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
+ +SE + G C+C
Sbjct: 190 VNRGVNLSEARPAAQPSGSCSC 211
>RGD|621144 [details] [associations]
symbol:Rab8a "RAB8A, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005794 "Golgi apparatus" evidence=IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0005932 "microtubule basal body"
evidence=IEA;ISO] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0007409 "axonogenesis"
evidence=IMP] [GO:0014069 "postsynaptic density" evidence=IDA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016023
"cytoplasmic membrane-bounded vesicle" evidence=IDA] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0019901 "protein kinase
binding" evidence=IPI] [GO:0030425 "dendrite" evidence=IDA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031513
"nonmotile primary cilium" evidence=IEA;ISO] [GO:0032880
"regulation of protein localization" evidence=IMP] [GO:0042384
"cilium assembly" evidence=IEA;ISO] [GO:0043025 "neuronal cell
body" evidence=IDA] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IDA;IMP] [GO:0048210 "Golgi vesicle
fusion to target membrane" evidence=IEA;ISO] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0051223
"regulation of protein transport" evidence=IDA;IMP] [GO:0055037
"recycling endosome" evidence=IEA;ISO] Reactome:REACT_97881
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:621144 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794 GO:GO:0048471
GO:GO:0007264 GO:GO:0014069 GO:GO:0015031 GO:GO:0043025
GO:GO:0016023 GO:GO:0007409 PROSITE:PS51419 GO:GO:0048169
GO:GO:0051223 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031
CTD:4218 KO:K07901 EMBL:BC071176 EMBL:BC105863 EMBL:M83675
IPI:IPI00196789 PIR:A42148 RefSeq:NP_446450.2 UniGene:Rn.16064
ProteinModelPortal:P35280 SMR:P35280 STRING:P35280
PhosphoSite:P35280 PRIDE:P35280 Ensembl:ENSRNOT00000020748
GeneID:117103 KEGG:rno:117103 UCSC:RGD:621144 NextBio:619992
ArrayExpress:P35280 Genevestigator:P35280
GermOnline:ENSRNOG00000014621 Uniprot:P35280
Length = 207
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 74/196 (37%), Positives = 120/196 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETVS-EVEQR 205
PQG S V VEQ+
Sbjct: 181 SPQGSSHGVKITVEQQ 196
>ZFIN|ZDB-GENE-030616-564 [details] [associations]
symbol:rab1a "RAB1A, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-030616-564 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
HOGENOM:HOG000233968 HSSP:P07560 GeneTree:ENSGT00700000104049
CTD:5861 KO:K07874 OrthoDB:EOG48D0WM OMA:NRVGPPS EMBL:AL772154
EMBL:BC050239 EMBL:BC062857 IPI:IPI00492639 RefSeq:NP_001007162.1
UniGene:Dr.77140 SMR:Q7ZSZ0 STRING:Q7ZSZ0
Ensembl:ENSDART00000043002 GeneID:368883 KEGG:dre:368883
InParanoid:Q7ZSZ0 NextBio:20813242 Uniprot:Q7ZSZ0
Length = 201
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 65/166 (39%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK----LLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 166
>ZFIN|ZDB-GENE-070424-24 [details] [associations]
symbol:zgc:162171 "zgc:162171" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070424-24 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00700000104228 EMBL:AL954129
EMBL:BC133896 IPI:IPI00844931 RefSeq:NP_001076317.1
UniGene:Dr.103256 Ensembl:ENSDART00000101408 GeneID:565931
KEGG:dre:565931 InParanoid:A3KNK9 OMA:QAVLKWK NextBio:20887930
Uniprot:A3KNK9
Length = 224
Score = 325 (119.5 bits), Expect = 2.7e-29, P = 2.7e-29
Identities = 72/190 (37%), Positives = 113/190 (59%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQI 65
M++ LLKV+V+GD GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + +V LQ+
Sbjct: 1 MQQERLLKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLNWDHRTVVRLQL 60
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WD AGQER+ ++ +YR A ++V+D+ TF+++ W+++ + G P V
Sbjct: 61 WDIAGQERYGNMTRVYYREAVGALVVFDMTRASTFQAVLKWKKDLDSKVALGNGRPLPAV 120
Query: 126 LLGNKIDTDG-GSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALK 182
LL NK D G +P K + G + ++ETSAK++ NID A + + E +A++
Sbjct: 121 LLANKCDQQRYGLCSKLP--KLEHFSRDHGFVGWYETSAKDNTNIDAAIMRLVENIMAVE 178
Query: 183 NEHKDIYYQP 192
E+ + P
Sbjct: 179 EENVPVESDP 188
>UNIPROTKB|E2QWS2 [details] [associations]
symbol:RAB23 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104457 CTD:51715 KO:K06234 OMA:VTEVFKY
EMBL:AAEX03008410 RefSeq:XP_538975.2 Ensembl:ENSCAFT00000003875
GeneID:481854 KEGG:cfa:481854 Uniprot:E2QWS2
Length = 237
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 68/181 (37%), Positives = 114/181 (62%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++V+G+ VGK+S++ +Y F++ YK TIG DF+ +++Q++D+ V L +WDTAGQE
Sbjct: 10 IKMVVVGNGAVGKSSMIQRYCKGIFTKDYKKTIGVDFLERQIQVNDEDVRLMLWDTAGQE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
F ++ A+YRGA CVLV+ +++FE++ +WRE+ + A+ G+ P VL+ NKID
Sbjct: 70 EFDAITKAYYRGAQACVLVFSTTDRESFEAISSWREKVV--AEVGD---IPTVLVQNKID 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S + ++A E A + + ++ TS KED N+ E F +AE L+ + I P
Sbjct: 125 LLDDSC--IKNEEA-EALAKKLKLRFYRTSVKEDLNVTEVFKYLAEKYLQKLKQQIAEDP 181
Query: 193 Q 193
+
Sbjct: 182 E 182
>UNIPROTKB|P51152 [details] [associations]
symbol:RAB12 "Ras-related protein Rab-12" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=ISS] [GO:0005764
"lysosome" evidence=ISS] [GO:0044257 "cellular protein catabolic
process" evidence=ISS] [GO:0008333 "endosome to lysosome transport"
evidence=ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0000139 "Golgi membrane" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0005764 GO:GO:0008333 PROSITE:PS51419
GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003 GO:GO:0044257
HOVERGEN:HBG009351 HOGENOM:HOG000233968 EMBL:Z22818 PIR:S40207
UniGene:Cfa.44760 ProteinModelPortal:P51152 SMR:P51152 PRIDE:P51152
InParanoid:P51152 OrthoDB:EOG45757M Uniprot:P51152
Length = 208
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 74/178 (41%), Positives = 106/178 (59%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 7 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 66
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YR A +LVYD+ ++TF+ L W +K D E +L+GNK+D
Sbjct: 67 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKW----MKMIDKYASEDAELLLVGNKLD 122
Query: 133 --TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
TD +R +K A E R + E SAK++ N+DE FL + + LK DI
Sbjct: 123 CETDREITRQQGEKFAHEITGMR----FCEASAKDNFNVDEIFLKLVDDILKKMPLDI 176
>UNIPROTKB|P22127 [details] [associations]
symbol:P22127 "Ras-related protein Rab-10" species:7785
"Discopyge ommata" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0005768 "endosome" evidence=ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISS] [GO:0005794 "Golgi apparatus"
evidence=ISS] [GO:0005802 "trans-Golgi network" evidence=ISS]
[GO:0006893 "Golgi to plasma membrane transport" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0016192
"vesicle-mediated transport" evidence=ISS] [GO:0016197 "endosomal
transport" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0030859 "polarized epithelial cell differentiation"
evidence=ISS] [GO:0032593 "insulin-responsive compartment"
evidence=ISS] [GO:0032869 "cellular response to insulin stimulus"
evidence=ISS] [GO:0043001 "Golgi to plasma membrane protein
transport" evidence=ISS] [GO:0045200 "establishment of neuroblast
polarity" evidence=ISS] [GO:0055037 "recycling endosome"
evidence=ISS] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISS] [GO:0071786 "endoplasmic reticulum tubular network
organization" evidence=ISS] [GO:0072372 "primary cilium"
evidence=ISS] [GO:0072659 "protein localization to plasma membrane"
evidence=ISS] [GO:0097051 "establishment of protein localization to
endoplasmic reticulum membrane" evidence=ISS] [GO:0000145 "exocyst"
evidence=ISS] [GO:0005886 "plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264 GO:GO:0030670
GO:GO:0032869 GO:GO:0016197 GO:GO:0055037 GO:GO:0007409
GO:GO:0005802 GO:GO:0072372 GO:GO:0072659 PROSITE:PS51419
GO:GO:0032593 GO:GO:0043001 GO:GO:0055038 GO:GO:0019003
HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859 EMBL:M38390
PIR:A38625 ProteinModelPortal:P22127 SMR:P22127 PRIDE:P22127
Uniprot:P22127
Length = 200
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 72/171 (42%), Positives = 109/171 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELHGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVV + K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVLKSKG-EQIAREHAIRFFETSAKANINIEKAFLTLAEDILQ 172
>MGI|MGI:894284 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005764
"lysosome" evidence=IDA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0008333 "endosome to lysosome
transport" evidence=IMP] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO] [GO:0030141 "secretory granule"
evidence=ISO] [GO:0044257 "cellular protein catabolic process"
evidence=IMP] [GO:0055038 "recycling endosome membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:894284 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0000139 GO:GO:0015031 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 OrthoDB:EOG45757M CTD:201475
KO:K07907 ChiTaRS:RAB12 EMBL:AB232607 EMBL:M79303 EMBL:AK013690
IPI:IPI00169699 PIR:JH0643 RefSeq:NP_077768.2 UniGene:Mm.248313
ProteinModelPortal:P35283 SMR:P35283 IntAct:P35283 STRING:P35283
PhosphoSite:P35283 PaxDb:P35283 PRIDE:P35283 DNASU:19328
Ensembl:ENSMUST00000167962 GeneID:19328 KEGG:mmu:19328
GeneTree:ENSGT00700000104049 InParanoid:P35283 NextBio:296297
Bgee:P35283 CleanEx:MM_RAB12 Genevestigator:P35283
GermOnline:ENSMUSG00000023460 Uniprot:P35283
Length = 243
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 67/176 (38%), Positives = 107/176 (60%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YR A +LVYD+ ++TF+ L W +K D E +L+GNK+D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKW----MKMIDKYASEDAELLLVGNKLD 157
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
+ + R + +++ ++ + + E SAK++ N+DE FL + + LK D+
Sbjct: 158 CE--TDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDV 211
>RGD|3527 [details] [associations]
symbol:Rab12 "RAB12, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000139 "Golgi membrane" evidence=IEA]
[GO:0005525 "GTP binding" evidence=TAS] [GO:0005764 "lysosome"
evidence=ISO;ISS] [GO:0005765 "lysosomal membrane" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction" evidence=IEA]
[GO:0008333 "endosome to lysosome transport" evidence=ISO;ISS]
[GO:0015031 "protein transport" evidence=IEA] [GO:0019003 "GDP
binding" evidence=ISO;ISS] [GO:0030141 "secretory granule"
evidence=IDA] [GO:0044257 "cellular protein catabolic process"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 RGD:3527
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0000139
GO:GO:0015031 GO:GO:0030141 GO:GO:0005764 GO:GO:0008333
PROSITE:PS51419 GO:GO:0055038 eggNOG:COG1100 GO:GO:0019003
GO:GO:0044257 HOVERGEN:HBG009351 CTD:201475 KO:K07907 EMBL:M83676
IPI:IPI00876621 PIR:C42148 RefSeq:NP_037149.1 UniGene:Rn.11021
ProteinModelPortal:P35284 SMR:P35284 IntAct:P35284 STRING:P35284
PRIDE:P35284 GeneID:25530 KEGG:rno:25530 NextBio:607023
Genevestigator:P35284 Uniprot:P35284
Length = 243
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 67/176 (38%), Positives = 107/176 (60%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 42 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 101
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YR A +LVYD+ ++TF+ L W +K D E +L+GNK+D
Sbjct: 102 RFNSITSAYYRSAKGIILVYDITKKETFDDLPKW----MKMIDKYASEDAELLLVGNKLD 157
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
+ + R + +++ ++ + + E SAK++ N+DE FL + + LK D+
Sbjct: 158 CE--TDREISRQQGEKFAQQITGMRFCEASAKDNFNVDEIFLKLVDDILKKMPLDV 211
>TAIR|locus:2124593 [details] [associations]
symbol:RABA1e "RAB GTPase homolog A1E" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005794 "Golgi apparatus" evidence=ISM] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0009627 "systemic acquired resistance"
evidence=RCA] [GO:0034976 "response to endoplasmic reticulum
stress" evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0015031
PROSITE:PS51419 EMBL:AL161548 eggNOG:COG1100 EMBL:AL021710
KO:K07976 HOGENOM:HOG000233968 EMBL:BT010933 EMBL:BT011645
IPI:IPI00520128 PIR:T04539 RefSeq:NP_193578.1 UniGene:At.27918
HSSP:P35278 ProteinModelPortal:O49513 SMR:O49513 PaxDb:O49513
PRIDE:O49513 EnsemblPlants:AT4G18430.1 GeneID:827574
KEGG:ath:AT4G18430 TAIR:At4g18430 InParanoid:O49513 OMA:AHEDSPG
PhylomeDB:O49513 ProtClustDB:CLSN2915845 Genevestigator:O49513
Uniprot:O49513
Length = 217
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 64/162 (39%), Positives = 108/162 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +D+K++ Q+WDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSIESKSTIGVEFATRSVHVDEKIIKAQLWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDITRHITFENVERWLKELRDHTDAN----VVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP ++A + + R N+ + ETSA + N+++AF
Sbjct: 129 DLR--HLRAVPTEEARSF-SERENMFFMETSALDATNVEQAF 167
>ZFIN|ZDB-GENE-040625-133 [details] [associations]
symbol:rab1bb "RAB1B, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-040625-133 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM EMBL:CR450793
EMBL:BC097013 IPI:IPI00492873 RefSeq:NP_001002129.2
UniGene:Dr.79474 SMR:Q4V984 STRING:Q4V984
Ensembl:ENSDART00000078980 GeneID:415219 KEGG:dre:415219 CTD:415219
InParanoid:Q4V984 OMA:MAMATEI NextBio:20818886 Uniprot:Q4V984
Length = 201
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 71/201 (35%), Positives = 120/201 (59%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ ++ ++ + +++ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCILLRFADDTYTESFISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W LK+ D E +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQW----LKEIDRYASENVNKLLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY-- 189
D + +VV A E+ G IP+ ETSAK N+++AF+ +AE K
Sbjct: 124 DLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMAEEIKKRMRPGASGG 180
Query: 190 YQPQGISETVSEVEQRGGCAC 210
+ + + V+Q GG C
Sbjct: 181 SEKPDLKIESTPVQQSGGGCC 201
>ZFIN|ZDB-GENE-041114-53 [details] [associations]
symbol:rab11a "RAB11a, member RAS oncogene family"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0001525
"angiogenesis" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0070121 "Kupffer's vesicle development"
evidence=IMP] [GO:0032402 "melanosome transport" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-041114-53
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GO:GO:0001525 GO:GO:0070121 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:BX908395 EMBL:BC085585 EMBL:BX914216 IPI:IPI00510031
RefSeq:NP_001007360.1 UniGene:Dr.119095 SMR:Q5U3E1 STRING:Q5U3E1
Ensembl:ENSDART00000060766 GeneID:492487 KEGG:dre:492487
InParanoid:Q5U3E1 NextBio:20865048 Uniprot:Q5U3E1
Length = 215
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 66/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K V QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTVKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFLETSALDSTNVETAF 165
>ZFIN|ZDB-GENE-090312-110 [details] [associations]
symbol:si:ch73-131e21.5 "si:ch73-131e21.5"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-090312-110
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM OMA:VESYIST
EMBL:CU467849 IPI:IPI00496910 UniGene:Dr.52596
Ensembl:ENSDART00000074083 Uniprot:B8JLC8
Length = 201
Score = 324 (119.1 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 65/166 (39%), Positives = 111/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK----LLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ A +IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDYTAAKEF-ADSLSIPFLETSAKSSTNVEQAFMTMA 166
>DICTYBASE|DDB_G0283603 [details] [associations]
symbol:rab32A "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 dictyBase:DDB_G0283603
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0045335
EMBL:AAFI02000056 GenomeReviews:CM000153_GR GO:GO:0015031
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 OMA:FCREGGF HSSP:P35288
EMBL:AF116859 RefSeq:XP_638960.1 ProteinModelPortal:Q54QR3
PRIDE:Q54QR3 EnsemblProtists:DDB0201639 GeneID:8624206
KEGG:ddi:DDB_G0283603 ProtClustDB:CLSZ2430347 Uniprot:Q54QR3
Length = 219
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 70/175 (40%), Positives = 103/175 (58%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL-VTLQIWDTAG 70
L K++V+GD G GKTS++ ++V+N FS YK+TIG DF K + D K V LQ+WD AG
Sbjct: 15 LYKILVVGDIGTGKTSIIKRFVHNIFSMHYKSTIGVDFALKVINWDPKTEVRLQLWDIAG 74
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA-CPFVLLGN 129
QERF S+ +Y+ A ++ +DV TFE++ W+ + + G E P VLL N
Sbjct: 75 QERFGSMTRVYYKEAVGAMITFDVTRMSTFEAVAKWKADIDSKVTYGADEKPIPVVLLAN 134
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
K D G + + ++C G I +FETSAKE+ NI++A + + LKN+
Sbjct: 135 KCDL-GKDAFIKTANDMDKYCKDNGFIGWFETSAKENMNIEKAARFLVDHILKND 188
>UNIPROTKB|Q5ZJN2 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0003924
"GTPase activity" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031175
"neuron projection development" evidence=IEA] [GO:0043234 "protein
complex" evidence=IEA] [GO:0072659 "protein localization to plasma
membrane" evidence=IEA] [GO:0032154 "cleavage furrow" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:AJ720402 IPI:IPI00585570 RefSeq:NP_001005827.1
UniGene:Gga.5322 ProteinModelPortal:Q5ZJN2 SMR:Q5ZJN2 STRING:Q5ZJN2
PRIDE:Q5ZJN2 Ensembl:ENSGALT00000012312 GeneID:415544
KEGG:gga:415544 InParanoid:Q5ZJN2 NextBio:20819128 Uniprot:Q5ZJN2
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|E1B9C0 [details] [associations]
symbol:RAB38 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 OMA:TKWKNDL
EMBL:DAAA02062489 IPI:IPI00823522 Ensembl:ENSBTAT00000020971
Uniprot:E1B9C0
Length = 213
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 72/179 (40%), Positives = 104/179 (58%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWD 67
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L D + +V LQ+WD
Sbjct: 6 KEHLYKLLVIGDLGVGKTSIIKRYVHQNFSSHYRATIGVDFALKVLHWDPETVVRLQLWD 65
Query: 68 TA--GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
A GQERF ++ +YR A +V+DV TFE++ W+ + + + V
Sbjct: 66 IAVIGQERFGNMTRVYYREAMGAFIVFDVTRPATFEAVTKWKNDLDSKLSLPNGKPVSVV 125
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
LL NK D G + K ++C G + +FETSAKE+ NIDEA C+ + L NE
Sbjct: 126 LLANKCD-QGKDVLLNNGLKMDQFCKEHGFVGWFETSAKENINIDEASRCLVKHILANE 183
>UNIPROTKB|F2Z4D5 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0072659 "protein localization to plasma membrane"
evidence=IEA] [GO:0055037 "recycling endosome" evidence=IEA]
[GO:0043234 "protein complex" evidence=IEA] [GO:0032154 "cleavage
furrow" evidence=IEA] [GO:0031175 "neuron projection development"
evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0005802 "trans-Golgi network" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
GO:GO:0031175 GO:GO:0032154 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 IPI:IPI00695221 UniGene:Bt.44630
EMBL:DAAA02027871 ProteinModelPortal:F2Z4D5 SMR:F2Z4D5 PRIDE:F2Z4D5
Ensembl:ENSBTAT00000025235 Uniprot:F2Z4D5
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|P62490 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9615
"Canis lupus familiaris" [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0032402 "melanosome transport" evidence=ISS] [GO:0072659
"protein localization to plasma membrane" evidence=ISS] [GO:0031175
"neuron projection development" evidence=ISS] [GO:0032154 "cleavage
furrow" evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X56388 PIR:E36364
RefSeq:NP_001003276.1 UniGene:Cfa.3814 UniGene:Cfa.45017
ProteinModelPortal:P62490 SMR:P62490 IntAct:P62490
MINT:MINT-4131822 STRING:P62490 PRIDE:P62490
Ensembl:ENSCAFT00000027321 GeneID:403957 KEGG:cfa:403957
InParanoid:P62490 NextBio:20817447 Uniprot:P62490
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|P62491 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0007049 "cell cycle" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030133 "transport vesicle" evidence=IEA] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=IEA] [GO:0051223 "regulation of protein transport"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0055038
"recycling endosome membrane" evidence=IEA] [GO:0019905 "syntaxin
binding" evidence=NAS] [GO:0048227 "plasma membrane to endosome
transport" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0032154 "cleavage furrow" evidence=IDA]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IDA] [GO:0031175 "neuron projection development"
evidence=IMP] [GO:0072659 "protein localization to plasma membrane"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=IDA] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0055037 "recycling
endosome" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0006833 "water transport" evidence=TAS] [GO:0030659
"cytoplasmic vesicle membrane" evidence=TAS] [GO:0055085
"transmembrane transport" evidence=TAS] Reactome:REACT_15518
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0015031 GO:GO:0003924 GO:GO:0055085
GO:GO:0019905 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0030659 GO:GO:0005802 GO:GO:0006833 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 Pathway_Interaction_DB:txa2pathway
GO:GO:0031175 EMBL:CH471082 GO:GO:0048169 GO:GO:0032154
GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
Pathway_Interaction_DB:arf6downstreampathway GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766
KO:K07904 OrthoDB:EOG4RR6J7 EMBL:X53143 EMBL:X56740 EMBL:AF000231
EMBL:AF498946 EMBL:CR407669 EMBL:CR536493 EMBL:BT020151
EMBL:BT020154 EMBL:AK311770 EMBL:BC013348 IPI:IPI00429190
PIR:S47169 RefSeq:NP_001193765.1 RefSeq:NP_004654.1
UniGene:Hs.321541 PDB:1OIV PDB:1OIW PDB:1OIX PDB:1YZK PDB:2D7C
PDB:2GZD PDB:2GZH PDB:2HV8 PDBsum:1OIV PDBsum:1OIW PDBsum:1OIX
PDBsum:1YZK PDBsum:2D7C PDBsum:2GZD PDBsum:2GZH PDBsum:2HV8
ProteinModelPortal:P62491 SMR:P62491 DIP:DIP-29138N IntAct:P62491
MINT:MINT-1434585 STRING:P62491 PhosphoSite:P62491 DMDM:50402542
OGP:P62491 PaxDb:P62491 PRIDE:P62491 DNASU:8766
Ensembl:ENST00000261890 GeneID:8766 KEGG:hsa:8766 UCSC:uc002apk.3
GeneCards:GC15P066018 HGNC:HGNC:9760 HPA:CAB013097 MIM:605570
neXtProt:NX_P62491 PharmGKB:PA34101 InParanoid:P62491
PhylomeDB:P62491 EvolutionaryTrace:P62491 GenomeRNAi:8766
NextBio:32876 ArrayExpress:P62491 Bgee:P62491 CleanEx:HS_RAB11A
Genevestigator:P62491 GermOnline:ENSG00000103769 GO:GO:0048227
Uniprot:P62491
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q52NJ1 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9823
"Sus scrofa" [GO:0045335 "phagocytic vesicle" evidence=ISS]
[GO:0055037 "recycling endosome" evidence=ISS] [GO:0032402
"melanosome transport" evidence=ISS] [GO:0072659 "protein
localization to plasma membrane" evidence=ISS] [GO:0031175 "neuron
projection development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0043234 "protein complex" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0005802
"trans-Golgi network" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7 EMBL:AY996814
RefSeq:NP_001026958.1 UniGene:Ssc.951 ProteinModelPortal:Q52NJ1
SMR:Q52NJ1 PRIDE:Q52NJ1 Ensembl:ENSSSCT00000024720 GeneID:595117
KEGG:ssc:595117 Uniprot:Q52NJ1
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q52NJ2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005783
"endoplasmic reticulum" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005783 GO:GO:0005794 GO:GO:0007264
GO:GO:0016192 GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100
HOVERGEN:HBG009351 HOGENOM:HOG000233968 CTD:5861 KO:K07874
OrthoDB:EOG48D0WM EMBL:AY996813 RefSeq:NP_001026957.1
UniGene:Ssc.11024 ProteinModelPortal:Q52NJ2 SMR:Q52NJ2
GeneID:595116 KEGG:ssc:595116 Uniprot:Q52NJ2
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 66/174 (37%), Positives = 113/174 (64%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q +F +++ W +E + A ++
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQGSFNNVKQWLQEIDRYASENVNK--- 119
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 -LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>UNIPROTKB|P62493 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9986
"Oryctolagus cuniculus" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD GeneTree:ENSGT00690000101664
CTD:8766 OrthoDB:EOG4RR6J7 EMBL:L19260 RefSeq:NP_001075720.1
UniGene:Ocu.1602 ProteinModelPortal:P62493 SMR:P62493
MINT:MINT-95772 STRING:P62493 PRIDE:P62493
Ensembl:ENSOCUT00000014754 GeneID:100009072 ChEMBL:CHEMBL1075143
Uniprot:P62493
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|Q5R9M7 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9601
"Pongo abelii" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0031175 "neuron projection development" evidence=ISS]
[GO:0032154 "cleavage furrow" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0055037 "recycling endosome" evidence=ISS]
[GO:0072659 "protein localization to plasma membrane" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886 GO:GO:0007264
GO:GO:0043234 GO:GO:0016192 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0007049 GO:GO:0000910 GO:GO:0005802
GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175 GO:GO:0032154
GO:GO:0055038 GO:GO:0032402 HOVERGEN:HBG009351 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 EMBL:CR859359
RefSeq:NP_001127429.1 UniGene:Pab.4950 ProteinModelPortal:Q5R9M7
SMR:Q5R9M7 PRIDE:Q5R9M7 Ensembl:ENSPPYT00000007758 GeneID:100174499
KEGG:pon:100174499 InParanoid:Q5R9M7 Uniprot:Q5R9M7
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>MGI|MGI:1858202 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000910 "cytokinesis" evidence=ISO] [GO:0003924
"GTPase activity" evidence=ISO] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0005768 "endosome" evidence=IEA] [GO:0005802 "trans-Golgi
network" evidence=ISO] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006184 "GTP catabolic process" evidence=ISO] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0016192 "vesicle-mediated
transport" evidence=ISO] [GO:0030133 "transport vesicle"
evidence=ISO] [GO:0030424 "axon" evidence=IDA] [GO:0031175 "neuron
projection development" evidence=ISO] [GO:0032154 "cleavage furrow"
evidence=ISO] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045335 "phagocytic vesicle" evidence=ISO] [GO:0045773
"positive regulation of axon extension" evidence=IMP] [GO:0048169
"regulation of long-term neuronal synaptic plasticity"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0051223 "regulation of protein transport"
evidence=ISO] [GO:0055037 "recycling endosome" evidence=ISO;IDA]
[GO:0072659 "protein localization to plasma membrane" evidence=ISO]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1858202
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005886
GO:GO:0007264 GO:GO:0043234 GO:GO:0016192 GO:GO:0015031
GO:GO:0003924 GO:GO:0055037 GO:GO:0007049 GO:GO:0000910
GO:GO:0005802 GO:GO:0072659 PROSITE:PS51419 GO:GO:0030133
GO:GO:0031175 GO:GO:0048169 GO:GO:0032154 GO:GO:0051223
GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OMA:AMGTRDD CTD:8766 KO:K07904
OrthoDB:EOG4RR6J7 EMBL:AF127669 EMBL:AK014268 EMBL:AK132072
EMBL:AK132159 EMBL:AK147122 EMBL:BC010722 IPI:IPI00323897
RefSeq:NP_059078.2 UniGene:Mm.1387 ProteinModelPortal:P62492
SMR:P62492 IntAct:P62492 STRING:P62492 PhosphoSite:P62492
PaxDb:P62492 PRIDE:P62492 Ensembl:ENSMUST00000172298 GeneID:53869
KEGG:mmu:53869 InParanoid:P62492 NextBio:310717 Bgee:P62492
CleanEx:MM_RAB11A Genevestigator:P62492
GermOnline:ENSMUSG00000004771 Uniprot:P62492
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>POMBASE|SPBC1703.10 [details] [associations]
symbol:ypt1 "GTPase Ypt1" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=ISO] [GO:0003924 "GTPase activity" evidence=IGI]
[GO:0005525 "GTP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=ISO] [GO:0005829 "cytosol" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IC] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=ISO] [GO:0006995 "cellular response to nitrogen
starvation" evidence=IMP] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IC] [GO:0070317 "negative regulation of G0
to G1 transition" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 PomBase:SPBC1703.10 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005829 GO:GO:0005886 GO:GO:0005634 GO:GO:0006886
GO:GO:0007264 GO:GO:0000139 GO:GO:0070317 GO:GO:0005789
EMBL:CU329671 GO:GO:0003924 GenomeReviews:CU329671_GR
PROSITE:PS51419 GO:GO:0006888 GO:GO:0006995 eggNOG:COG1100
HOGENOM:HOG000233968 KO:K07874 OMA:IDSTPVR EMBL:X52099 EMBL:X15082
PIR:S04590 PIR:T50323 RefSeq:NP_596205.1 ProteinModelPortal:P11620
SMR:P11620 STRING:P11620 PRIDE:P11620 EnsemblFungi:SPBC1703.10.1
GeneID:2539784 KEGG:spo:SPBC1703.10 OrthoDB:EOG49W5QK
NextBio:20800933 Uniprot:P11620
Length = 203
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 67/166 (40%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++ K V LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTFELEGKTVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q +F +++ W +E + A G + +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQDSFNNVKQWLQEIDRYAVEGVNR----LLVGNK- 122
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+D +VV A E+ A NIP+ ETSAK+ N+++AFL ++
Sbjct: 123 -SDMVDKKVVEYSVAKEF-ADSLNIPFLETSAKDSTNVEQAFLTMS 166
>RGD|619762 [details] [associations]
symbol:Rab11a "RAB11a, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000910 "cytokinesis" evidence=IEA;ISO]
[GO:0003924 "GTPase activity" evidence=ISO;ISS;IDA] [GO:0005525
"GTP binding" evidence=IDA;TAS] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005739 "mitochondrion" evidence=IEA;ISO]
[GO:0005802 "trans-Golgi network" evidence=IEA;ISO] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IDA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA;ISO] [GO:0030133
"transport vesicle" evidence=IDA] [GO:0030424 "axon" evidence=ISO]
[GO:0030670 "phagocytic vesicle membrane" evidence=IEA] [GO:0031175
"neuron projection development" evidence=ISO;ISS] [GO:0032154
"cleavage furrow" evidence=ISO;ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0043234 "protein complex"
evidence=IEA;ISO] [GO:0045335 "phagocytic vesicle"
evidence=ISO;ISS] [GO:0045773 "positive regulation of axon
extension" evidence=ISO] [GO:0048169 "regulation of long-term
neuronal synaptic plasticity" evidence=IMP] [GO:0048471
"perinuclear region of cytoplasm" evidence=ISO] [GO:0051223
"regulation of protein transport" evidence=IMP] [GO:0055037
"recycling endosome" evidence=ISO;IDA] [GO:0055038 "recycling
endosome membrane" evidence=IEA] [GO:0072659 "protein localization
to plasma membrane" evidence=ISO;ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619762 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005739 GO:GO:0005886 GO:GO:0007264 GO:GO:0043234
GO:GO:0016192 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0000910 GO:GO:0005802 GO:GO:0072659
PROSITE:PS51419 GO:GO:0030133 GO:GO:0031175 GO:GO:0048169
GO:GO:0032154 GO:GO:0051223 GO:GO:0055038 eggNOG:COG1100
GO:GO:0032402 HOVERGEN:HBG009351 HOGENOM:HOG000233968 OMA:AMGTRDD
GeneTree:ENSGT00690000101664 CTD:8766 KO:K07904 OrthoDB:EOG4RR6J7
EMBL:M75153 EMBL:BC085727 IPI:IPI00214434 PIR:JN0056
RefSeq:NP_112414.1 UniGene:Rn.1016 ProteinModelPortal:P62494
SMR:P62494 DIP:DIP-46857N IntAct:P62494 STRING:P62494 PRIDE:P62494
Ensembl:ENSRNOT00000015598 GeneID:81830 KEGG:rno:81830
UCSC:RGD:619762 InParanoid:P62494 NextBio:615779
Genevestigator:P62494 GermOnline:ENSRNOG00000011302 Uniprot:P62494
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDSTNVEAAF 165
>UNIPROTKB|F1M225 [details] [associations]
symbol:Rab1 "Protein Rab1" species:10116 "Rattus
norvegicus" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 RGD:619736 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 IPI:IPI00951369
Ensembl:ENSRNOT00000020209 ArrayExpress:F1M225 Uniprot:F1M225
Length = 205
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 65/175 (37%), Positives = 115/175 (65%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+S++ + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K +
Sbjct: 2 LSLSPEPDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIK 61
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++
Sbjct: 62 LQIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK-- 119
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 120 --LLVGNKCDLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 169
>TAIR|locus:2015576 [details] [associations]
symbol:RABA1b "RAB GTPase homolog A1B" species:3702
"Arabidopsis thaliana" [GO:0003924 "GTPase activity" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA;ISS;IDA] [GO:0005622
"intracellular" evidence=IEA] [GO:0005802 "trans-Golgi network"
evidence=NAS] [GO:0016020 "membrane" evidence=IEA] [GO:0006886
"intracellular protein transport" evidence=TAS] [GO:0005773
"vacuole" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005774 "vacuolar membrane" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0042538
"hyperosmotic salinity response" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005774 GO:GO:0006886
GO:GO:0007264 PROSITE:PS51419 EMBL:AC051629 GO:GO:0042538
eggNOG:COG1100 KO:K07976 HOGENOM:HOG000233968 EMBL:L18883
EMBL:BT006406 EMBL:AK227865 EMBL:AY086881 IPI:IPI00537039
PIR:S59942 RefSeq:NP_173136.1 UniGene:At.324
ProteinModelPortal:Q39222 SMR:Q39222 STRING:Q39222 PaxDb:Q39222
PRIDE:Q39222 EnsemblPlants:AT1G16920.1 GeneID:838263
KEGG:ath:AT1G16920 TAIR:At1g16920 InParanoid:Q39222 OMA:QIYRITS
PhylomeDB:Q39222 ProtClustDB:CLSN2914413 Genevestigator:Q39222
GermOnline:AT1G16920 Uniprot:Q39222
Length = 216
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 67/162 (41%), Positives = 106/162 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ L++D K+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFNLESKSTIGVEFATRTLKVDGKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV + TFE++ W +E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRRATFENVDRWLKELKNHTDPN----IVVMLVGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D VP + + A + ++ + ETSA E N+++AF
Sbjct: 129 DLR--HLLAVPTEDGKSY-AEQESLCFMETSALEATNVEDAF 167
>WB|WBGene00004274 [details] [associations]
symbol:rab-11.1 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;TAS] [GO:0005525 "GTP
binding" evidence=IEA;TAS] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0006184 "GTP catabolic
process" evidence=IEA] [GO:0006886 "intracellular protein
transport" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0000910
"cytokinesis" evidence=IMP] [GO:0051301 "cell division"
evidence=IMP] [GO:0006898 "receptor-mediated endocytosis"
evidence=IMP] [GO:0006952 "defense response" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0055037
"recycling endosome" evidence=IDA] [GO:0060471 "cortical granule
exocytosis" evidence=IMP] [GO:0060473 "cortical granule"
evidence=IDA] [GO:0030703 "eggshell formation" evidence=IMP]
[GO:0032467 "positive regulation of cytokinesis" evidence=IMP]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0006915 GO:GO:0007264 GO:GO:0032467 GO:GO:0006952
GO:GO:0002119 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473 GO:GO:0030703
HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 69/177 (38%), Positives = 113/177 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ + ++ K V QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD + +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEI--ALKNEH 185
D R VP +A + A R + + ETSA + N++ AF + EI ++ N+H
Sbjct: 127 DLR--HLRAVPTDEAKIY-AERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKH 180
>UNIPROTKB|O01803 [details] [associations]
symbol:rab-11.1 "Protein RAB-11.1" species:6239
"Caenorhabditis elegans" [GO:0006184 "GTP catabolic process"
evidence=TAS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0009792 GO:GO:0006898
GO:GO:0040007 GO:GO:0006915 GO:GO:0007264 GO:GO:0032467
GO:GO:0006952 GO:GO:0002119 GO:GO:0015031 GO:GO:0003924
GO:GO:0055037 GO:GO:0000910 eggNOG:COG1100 GO:GO:0060473
GO:GO:0030703 HOGENOM:HOG000233968 OMA:AMGTRDD HSSP:P07560
GeneTree:ENSGT00690000101664 GO:GO:0060471 KO:K07904 EMBL:FO081455
PIR:T29035 RefSeq:NP_490675.1 ProteinModelPortal:O01803 SMR:O01803
DIP:DIP-24288N MINT:MINT-1111275 STRING:O01803 PaxDb:O01803
EnsemblMetazoa:F53G12.1.1 EnsemblMetazoa:F53G12.1.2 GeneID:171601
KEGG:cel:CELE_F53G12.1 UCSC:F53G12.1 CTD:171601 WormBase:F53G12.1
InParanoid:O01803 NextBio:871961 ArrayExpress:O01803 Uniprot:O01803
Length = 211
Score = 323 (118.8 bits), Expect = 4.4e-29, P = 4.4e-29
Identities = 69/177 (38%), Positives = 113/177 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ + ++ K V QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSISVEGKTVKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD + +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHVTYENVERWLKELRDHAD----QNIVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEI--ALKNEH 185
D R VP +A + A R + + ETSA + N++ AF + EI ++ N+H
Sbjct: 127 DLR--HLRAVPTDEAKIY-AERNQLSFIETSALDSTNVEAAFTNILTEIYKSVSNKH 180
>ASPGD|ASPL0000016908 [details] [associations]
symbol:srgB species:162425 "Emericella nidulans"
[GO:0006995 "cellular response to nitrogen starvation"
evidence=IEA] [GO:0070317 "negative regulation of G0 to G1
transition" evidence=IEA] [GO:0003924 "GTPase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0006184 "GTP catabolic process" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
EMBL:BN001302 HOGENOM:HOG000233968 OMA:NRVGPPS
ProteinModelPortal:C8V3Z5 SMR:C8V3Z5 EnsemblFungi:CADANIAT00004373
Uniprot:C8V3Z5
Length = 201
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 67/166 (40%), Positives = 108/166 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K V LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA +VYDV +F +++ W +E + A G ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AFL +A
Sbjct: 124 DME--DKKVVEYTVAKEFADSLG-IPFLETSAKNASNVEQAFLTMA 166
>UNIPROTKB|F1PVP9 [details] [associations]
symbol:RAB1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
GeneTree:ENSGT00700000104049 OMA:MIMASEI EMBL:AAEX03011629
Ensembl:ENSCAFT00000020406 Uniprot:F1PVP9
Length = 203
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 65/174 (37%), Positives = 114/174 (65%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
++N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 2 AMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 61
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++
Sbjct: 62 QIWDTAGQERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK--- 118
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+L+GNK D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 119 -LLVGNKSDLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 168
>UNIPROTKB|F2Z5U4 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 OMA:NRVGPPS
EMBL:CU928819 ProteinModelPortal:F2Z5U4 SMR:F2Z5U4
Ensembl:ENSSSCT00000009153 Uniprot:F2Z5U4
Length = 202
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 64/166 (38%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK----LLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 124 DLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 166
>UNIPROTKB|I3L6D2 [details] [associations]
symbol:RAB1A "Ras-related protein Rab-1A" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104049 EMBL:CU928819
Ensembl:ENSSSCT00000031971 Uniprot:I3L6D2
Length = 201
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 64/166 (38%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 7 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W +E + A ++ +L+GNK
Sbjct: 67 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQWLQEIDRYASENVNK----LLVGNKC 122
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N++++F+ +A
Sbjct: 123 DLT--TKKVVDYTTAKEFADSLG-IPFLETSAKNATNVEQSFMTMA 165
>UNIPROTKB|I3LHE8 [details] [associations]
symbol:RAB7L1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GeneTree:ENSGT00700000104228 KO:K07916 OMA:GQERFIS
EMBL:FP565441 RefSeq:XP_003357447.1 RefSeq:XP_003357448.1
RefSeq:XP_003357449.1 Ensembl:ENSSSCT00000028022 GeneID:100626414
KEGG:ssc:100626414 Uniprot:I3LHE8
Length = 203
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 71/187 (37%), Positives = 106/187 (56%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEVVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGGPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N ++
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSKEE 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 MSLSTQG 187
>TAIR|locus:2124092 [details] [associations]
symbol:RABA1d "RAB GTPase homolog A1D" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0031901 "early
endosome membrane" evidence=IDA] [GO:0032588 "trans-Golgi network
membrane" evidence=IDA] [GO:0005829 "cytosol" evidence=RCA]
[GO:0009506 "plasmodesma" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009506 GO:GO:0005794 GO:GO:0007264 GO:GO:0031901
EMBL:CP002687 GenomeReviews:CT486007_GR GO:GO:0032588 EMBL:AL161549
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AL035526
KO:K07976 HOGENOM:HOG000233968 ProtClustDB:CLSN2685455
EMBL:BT003901 EMBL:BT004936 EMBL:AK228509 IPI:IPI00535318
PIR:T04872 RefSeq:NP_193615.1 UniGene:At.24230 HSSP:P20339
ProteinModelPortal:Q9SN35 SMR:Q9SN35 IntAct:Q9SN35 PaxDb:Q9SN35
PRIDE:Q9SN35 EnsemblPlants:AT4G18800.1 GeneID:827614
KEGG:ath:AT4G18800 TAIR:At4g18800 InParanoid:Q9SN35 OMA:AMGTRDD
PhylomeDB:Q9SN35 Genevestigator:Q9SN35 Uniprot:Q9SN35
Length = 214
Score = 322 (118.4 bits), Expect = 5.6e-29, P = 5.6e-29
Identities = 66/162 (40%), Positives = 103/162 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +++K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVNEKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLVGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D V Q + + A ++ + ETSA E N++ AF
Sbjct: 129 DL---RHLVAVQTEDAKSFAENESLYFMETSALESTNVENAF 167
>UNIPROTKB|Q2HJH2 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005525 "GTP binding" evidence=ISS] [GO:0016020
"membrane" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 HOVERGEN:HBG009351
OrthoDB:EOG48D0WM EMBL:BC105393 IPI:IPI00727050
RefSeq:NP_001069701.1 UniGene:Bt.59545 ProteinModelPortal:Q2HJH2
SMR:Q2HJH2 PRIDE:Q2HJH2 GeneID:540685 KEGG:bta:540685 CTD:81876
InParanoid:Q2HJH2 KO:K07875 NextBio:20878772 Uniprot:Q2HJH2
Length = 201
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 64/166 (38%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 166
>UNIPROTKB|Q9H0U4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005525 "GTP binding" evidence=IDA]
[GO:0005794 "Golgi apparatus" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739
GO:GO:0005794 Reactome:REACT_115566 GO:GO:0007264
Reactome:REACT_21300 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 PDB:3JZA PDBsum:3JZA
HOGENOM:HOG000233968 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI EMBL:AF092437 EMBL:AL136635 EMBL:AK292086 EMBL:AK315333
EMBL:BC071169 IPI:IPI00008964 RefSeq:NP_112243.1 UniGene:Hs.300816
PDB:3NKV PDB:4HLQ PDB:4I1O PDBsum:3NKV PDBsum:4HLQ PDBsum:4I1O
ProteinModelPortal:Q9H0U4 SMR:Q9H0U4 DIP:DIP-42462N IntAct:Q9H0U4
MINT:MINT-1343701 STRING:Q9H0U4 PhosphoSite:Q9H0U4 DMDM:23396834
PaxDb:Q9H0U4 PeptideAtlas:Q9H0U4 PRIDE:Q9H0U4 DNASU:81876
Ensembl:ENST00000311481 GeneID:81876 KEGG:hsa:81876 UCSC:uc001ohf.3
GeneCards:GC11P066036 H-InvDB:HIX0034908 H-InvDB:HIX0128663
HGNC:HGNC:18370 HPA:CAB010225 MIM:612565 neXtProt:NX_Q9H0U4
PharmGKB:PA34108 InParanoid:Q9H0U4 PhylomeDB:Q9H0U4 ChiTaRS:RAB1B
EvolutionaryTrace:Q9H0U4 GenomeRNAi:81876 NextBio:72222
ArrayExpress:Q9H0U4 Bgee:Q9H0U4 CleanEx:HS_RAB1B
Genevestigator:Q9H0U4 GermOnline:ENSG00000174903 Uniprot:Q9H0U4
Length = 201
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 64/166 (38%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 166
>UNIPROTKB|Q5RE13 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 CTD:81876
KO:K07875 HSSP:P62820 EMBL:CR857726 RefSeq:NP_001127221.1
UniGene:Pab.14281 ProteinModelPortal:Q5RE13 SMR:Q5RE13 PRIDE:Q5RE13
GeneID:100174276 KEGG:pon:100174276 InParanoid:Q5RE13
Uniprot:Q5RE13
Length = 201
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 64/166 (38%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 166
>POMBASE|SPAC18G6.03 [details] [associations]
symbol:ypt3 "GTPase Ypt3" species:4896
"Schizosaccharomyces pombe" [GO:0000139 "Golgi membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0005525 "GTP binding" evidence=ISM] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829
"cytosol" evidence=IDA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0006886 "intracellular protein transport" evidence=TAS]
[GO:0006887 "exocytosis" evidence=IMP] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IC] [GO:0010008 "endosome
membrane" evidence=IEA] [GO:0033205 "cell cycle cytokinesis"
evidence=IMP] [GO:0042144 "vacuole fusion, non-autophagic"
evidence=IMP] [GO:0071852 "fungal-type cell wall organization or
biogenesis" evidence=IMP] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
PomBase:SPAC18G6.03 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829
GO:GO:0005886 GO:GO:0005634 GO:GO:0006886 GO:GO:0007264
GO:GO:0000139 EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003924
GO:GO:0010008 GO:GO:0006887 PROSITE:PS51419 GO:GO:0033205
eggNOG:COG1100 GO:GO:0042144 GO:GO:0071852 KO:K07976
HOGENOM:HOG000233968 OMA:QKQIRDS OrthoDB:EOG41K2ND EMBL:X52100
EMBL:X52732 PIR:S10026 RefSeq:NP_593667.1 ProteinModelPortal:P17610
SMR:P17610 STRING:P17610 PRIDE:P17610 EnsemblFungi:SPAC18G6.03.1
GeneID:2542219 KEGG:spo:SPAC18G6.03 NextBio:20803288 Uniprot:P17610
Length = 214
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 69/191 (36%), Positives = 116/191 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K +++GDSGVGK++L+ ++ N+F+ + K+TIG +F T+ + +D+K + QIWDTAGQ
Sbjct: 10 LFKTVLIGDSGVGKSNLLMRFTRNEFNIESKSTIGVEFATRNIVLDNKKIKAQIWDTAGQ 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYD+ Q +F+++ W +E + AD +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALIVYDITKQSSFDNVGRWLKELREHADSN----IVIMLVGNK- 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
TD R V ++A + A N+ + ETSA + N++EAF V EI ++ +
Sbjct: 125 -TDLLHLRAVSTEEAQAFAA-ENNLSFIETSAMDASNVEEAFQTVLTEIFRIVSNRSLEA 182
Query: 191 QPQGISETVSE 201
G+ T +
Sbjct: 183 GDDGVHPTAGQ 193
>SGD|S000001889 [details] [associations]
symbol:SEC4 "Rab family GTPase essential for exocytic
secretion and autophagy" species:4932 "Saccharomyces cerevisiae"
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEP;IGI;IMP] [GO:0006914 "autophagy" evidence=IGI;IMP]
[GO:0031982 "vesicle" evidence=IDA] [GO:0005739 "mitochondrion"
evidence=IDA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA;TAS] [GO:0007121 "bipolar cellular bud
site selection" evidence=TAS] [GO:0030478 "actin cap" evidence=TAS]
[GO:0030133 "transport vesicle" evidence=TAS] [GO:0031410
"cytoplasmic vesicle" evidence=IEA] [GO:0006906 "vesicle fusion"
evidence=IMP] [GO:0006893 "Golgi to plasma membrane transport"
evidence=IMP] [GO:0005741 "mitochondrial outer membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IEA;IDA]
[GO:0031321 "ascospore-type prospore assembly" evidence=IMP]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0000910
"cytokinesis" evidence=TAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA;IDA] [GO:0006810
"transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA;IDA] [GO:0030658 "transport vesicle membrane"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=IDA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 SGD:S000001889
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GO:GO:0005741 GO:GO:0015031 GO:GO:0003924 GO:GO:0006914 EMBL:D50617
EMBL:BK006940 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030133
GO:GO:0030658 eggNOG:COG1100 GO:GO:0006893 GO:GO:0030478
GO:GO:0000131 GO:GO:0006906 GO:GO:0007121 GO:GO:0031321 PDB:3CPH
PDBsum:3CPH GO:GO:0007107 KO:K07976 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104031 OMA:AMGIVLI PDB:2EQB PDB:2OCY
PDBsum:2EQB PDBsum:2OCY EMBL:M16507 EMBL:AY692843 PIR:A25959
RefSeq:NP_116650.1 PDB:1G16 PDB:1G17 PDBsum:1G16 PDBsum:1G17
ProteinModelPortal:P07560 SMR:P07560 DIP:DIP-2492N IntAct:P07560
MINT:MINT-689902 STRING:P07560 PaxDb:P07560 PeptideAtlas:P07560
PRIDE:P07560 EnsemblFungi:YFL005W GeneID:850543 KEGG:sce:YFL005W
CYGD:YFL005w OrthoDB:EOG4X3M9K EvolutionaryTrace:P07560
NextBio:966307 Genevestigator:P07560 GermOnline:YFL005W
Uniprot:P07560
Length = 215
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 66/169 (39%), Positives = 110/169 (65%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+++K++++GDSGVGK+ L+ ++V +KF+ + TIG DF K + ++ K V LQ+WDTAG
Sbjct: 19 SIMKILLIGDSGVGKSCLLVRFVEDKFNPSFITTIGIDFKIKTVDINGKKVKLQLWDTAG 78
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYDV ++TF +++ W K + ++ +L+GNK
Sbjct: 79 QERFRTITTAYYRGAMGIILVYDVTDERTFTNIKQW----FKTVNEHANDEAQLLLVGNK 134
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
D + +RVV + E A IP+ E+SAK D N++E F +A++
Sbjct: 135 SDME---TRVVTADQG-EALAKELGIPFIESSAKNDDNVNEIFFTLAKL 179
>ZFIN|ZDB-GENE-041212-69 [details] [associations]
symbol:rab25a "RAB25, member RAS oncogene family a"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-041212-69 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 HOVERGEN:HBG009351
CTD:57111 EMBL:BC086715 IPI:IPI00488879 RefSeq:NP_001008641.1
UniGene:Dr.81751 ProteinModelPortal:Q5PRC5 SMR:Q5PRC5 GeneID:494098
KEGG:dre:494098 InParanoid:Q5PRC5 NextBio:20865605
ArrayExpress:Q5PRC5 Uniprot:Q5PRC5
Length = 210
Score = 321 (118.1 bits), Expect = 7.1e-29, P = 7.1e-29
Identities = 65/163 (39%), Positives = 106/163 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++G+SGVGK++L++++ N+F+ + TIG +F T+ +Q+D + QIWDTAG
Sbjct: 10 VFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRSVQVDSITIKAQIWDTAGL 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+ES++ W +E ADP H +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYDHADP--HIVV--MLVGNKN 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
D + R VP ++A ++ G + + ETSA E N++ AFL
Sbjct: 126 DL--ATVRTVPTEEAKDFADANGLL-FMETSALESTNVESAFL 165
>CGD|CAL0002519 [details] [associations]
symbol:SEC4 species:5476 "Candida albicans" [GO:0035690
"cellular response to drug" evidence=IMP] [GO:0003924 "GTPase
activity" evidence=IGI;ISS] [GO:0006906 "vesicle fusion"
evidence=IGI] [GO:0006903 "vesicle targeting" evidence=IGI]
[GO:0000131 "incipient cellular bud site" evidence=IDA] [GO:0005934
"cellular bud tip" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] [GO:0006887 "exocytosis" evidence=IMP] [GO:0009306
"protein secretion" evidence=IMP] [GO:0006893 "Golgi to plasma
membrane transport" evidence=IMP] [GO:0031521 "spitzenkorper"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005829
"cytosol" evidence=IEA] [GO:0005741 "mitochondrial outer membrane"
evidence=IEA] [GO:0031982 "vesicle" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0031321 "ascospore-type prospore
assembly" evidence=IEA] [GO:0006914 "autophagy" evidence=IEA]
[GO:0007107 "membrane addition at site of cytokinesis"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0005934 GO:GO:0003924 GO:GO:0009306
GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419 GO:GO:0030658
GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044 EMBL:AACQ01000043
GO:GO:0000131 GO:GO:0006906 GO:GO:0031521 KO:K07901
RefSeq:XP_718237.1 RefSeq:XP_718333.1 ProteinModelPortal:P0CY31
SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032 GeneID:3640119
KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571 Uniprot:P0CY31
Length = 210
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/174 (37%), Positives = 113/174 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
++K++++GDSGVGK+ L+ ++V +KF+ + TIG DF + ++ K + LQ+WDTAGQ
Sbjct: 14 IMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA VL+YDV ++FE+++NW + + A+ E L+GNK
Sbjct: 74 ERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHAN----EDAQIFLVGNKC 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
D + +R V +++ E A + N+P+ E SAK + N+D F +A I ++ +H
Sbjct: 130 DDE--VNRQVSKEQGQELAA-KLNVPFLEASAKSNENVDSIFYELASI-IQEKH 179
>UNIPROTKB|Q2TA29 [details] [associations]
symbol:RAB11A "Ras-related protein Rab-11A" species:9913
"Bos taurus" [GO:0006184 "GTP catabolic process" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0055037
"recycling endosome" evidence=ISS] [GO:0032402 "melanosome
transport" evidence=ISS] [GO:0072659 "protein localization to
plasma membrane" evidence=ISS] [GO:0031175 "neuron projection
development" evidence=ISS] [GO:0032154 "cleavage furrow"
evidence=ISS] [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0055038 "recycling endosome membrane" evidence=IEA] [GO:0030670
"phagocytic vesicle membrane" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0005525
"GTP binding" evidence=IEA] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0007264 GO:GO:0015031 GO:GO:0003924 GO:GO:0055037
GO:GO:0007049 GO:GO:0072659 PROSITE:PS51419 GO:GO:0031175
GO:GO:0032154 GO:GO:0055038 eggNOG:COG1100 GO:GO:0032402
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:Q15907 EMBL:BC111143
IPI:IPI00695221 RefSeq:NP_001033251.1 UniGene:Bt.44630
ProteinModelPortal:Q2TA29 SMR:Q2TA29 STRING:Q2TA29 PRIDE:Q2TA29
GeneID:534708 KEGG:bta:534708 CTD:8766 InParanoid:Q2TA29 KO:K07904
OrthoDB:EOG4RR6J7 NextBio:20876511 Uniprot:Q2TA29
Length = 216
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 65/162 (40%), Positives = 105/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP +A + A + + + ETSA + N++ AF
Sbjct: 127 DLR--HLRAVPTDEARAF-AEKNGLSFIETSALDYTNVEAAF 165
>UNIPROTKB|P0CY31 [details] [associations]
symbol:SEC4 "Ras-related protein SEC4" species:237561
"Candida albicans SC5314" [GO:0000131 "incipient cellular bud site"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=IGI;ISS]
[GO:0005886 "plasma membrane" evidence=IDA] [GO:0005934 "cellular
bud tip" evidence=IDA] [GO:0006184 "GTP catabolic process"
evidence=IGI;ISS] [GO:0006887 "exocytosis" evidence=IMP]
[GO:0006893 "Golgi to plasma membrane transport" evidence=IMP]
[GO:0006903 "vesicle targeting" evidence=IGI] [GO:0006906 "vesicle
fusion" evidence=IGI] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0031521 "spitzenkorper" evidence=IDA] [GO:0035690 "cellular
response to drug" evidence=IMP] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 CGD:CAL0002519 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GO:GO:0005934 GO:GO:0003924
GO:GO:0009306 GO:GO:0035690 GO:GO:0006887 PROSITE:PS51419
GO:GO:0030658 GO:GO:0006903 GO:GO:0006893 EMBL:AACQ01000044
EMBL:AACQ01000043 GO:GO:0000131 GO:GO:0006906 GO:GO:0031521
KO:K07901 RefSeq:XP_718237.1 RefSeq:XP_718333.1
ProteinModelPortal:P0CY31 SMR:P0CY31 PRIDE:P0CY31 GeneID:3640032
GeneID:3640119 KEGG:cal:CaO19.10103 KEGG:cal:CaO19.2571
Uniprot:P0CY31
Length = 210
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 66/174 (37%), Positives = 113/174 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
++K++++GDSGVGK+ L+ ++V +KF+ + TIG DF + ++ K + LQ+WDTAGQ
Sbjct: 14 IMKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIESKGKRIKLQVWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA VL+YDV ++FE+++NW + + A+ E L+GNK
Sbjct: 74 ERFRTITTAYYRGAMGIVLIYDVTDSRSFENVENWFQTVTQHAN----EDAQIFLVGNKC 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
D + +R V +++ E A + N+P+ E SAK + N+D F +A I ++ +H
Sbjct: 130 DDE--VNRQVSKEQGQELAA-KLNVPFLEASAKSNENVDSIFYELASI-IQEKH 179
>MGI|MGI:1923558 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0005525 "GTP binding" evidence=ISO] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IDA]
[GO:0006810 "transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 MGI:MGI:1923558
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM CTD:81876 KO:K07875
OMA:MIMASEI ChiTaRS:RAB1B EMBL:AK003609 EMBL:AK156726 EMBL:BC016408
IPI:IPI00133706 RefSeq:NP_083852.1 UniGene:Mm.182563
ProteinModelPortal:Q9D1G1 SMR:Q9D1G1 STRING:Q9D1G1
PhosphoSite:Q9D1G1 PaxDb:Q9D1G1 PRIDE:Q9D1G1
Ensembl:ENSMUST00000025804 GeneID:76308 KEGG:mmu:76308
InParanoid:Q9D1G1 NextBio:344943 Bgee:Q9D1G1 CleanEx:MM_RAB1B
Genevestigator:Q9D1G1 GermOnline:ENSMUSG00000024870 Uniprot:Q9D1G1
Length = 201
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 63/166 (37%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G +P+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-VPFLETSAKNATNVEQAFMTMA 166
>RGD|1642882 [details] [associations]
symbol:Rab1b "RAB1B, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0005525 "GTP binding" evidence=IEA;ISO]
[GO:0005739 "mitochondrion" evidence=IEA;ISO] [GO:0005794 "Golgi
apparatus" evidence=IEA;ISO] [GO:0007264 "small GTPase mediated
signal transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1642882 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:CH473953 EMBL:CH473966 CTD:81876 KO:K07875
UniGene:Rn.155100 RefSeq:NP_001103449.1 RefSeq:XP_002727643.2
SMR:G3V6H0 Ensembl:ENSRNOT00000004991 Ensembl:ENSRNOT00000027486
GeneID:100126191 GeneID:100363782 KEGG:rno:100126191
KEGG:rno:100363782 NextBio:20789017 Uniprot:G3V6H0
Length = 201
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 63/166 (37%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G +P+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-VPFLETSAKNATNVEQAFMTMA 166
>TAIR|locus:2035302 [details] [associations]
symbol:RABA3 "RAB GTPase homolog A3" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005768 "endosome" evidence=IDA]
[GO:0009504 "cell plate" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005634 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 PROSITE:PS51419
eggNOG:COG1100 GO:GO:0009504 EMBL:AC023628 KO:K07976
HOGENOM:HOG000233968 HSSP:P20339 EMBL:BT010707 EMBL:BT010979
IPI:IPI00532357 PIR:B86142 RefSeq:NP_171628.2 UniGene:At.42661
ProteinModelPortal:Q9LNK1 SMR:Q9LNK1 IntAct:Q9LNK1 PaxDb:Q9LNK1
PRIDE:Q9LNK1 EnsemblPlants:AT1G01200.1 GeneID:839493
KEGG:ath:AT1G01200 TAIR:At1g01200 InParanoid:Q9LNK1 OMA:HADDSAV
PhylomeDB:Q9LNK1 ProtClustDB:CLSN2690626 Genevestigator:Q9LNK1
Uniprot:Q9LNK1
Length = 237
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 68/167 (40%), Positives = 105/167 (62%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+V+GDS VGKT L++++ +N+F K+TIG +F T+ + + KLV QIWDTAGQ
Sbjct: 28 VFKVVVIGDSAVGKTQLLSRFTHNEFCYDSKSTIGVEFQTRTITLRGKLVKAQIWDTAGQ 87
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYD+ + +F+ + W EE AD ++ +L+GNK
Sbjct: 88 ERYRAVTSAYYRGALGAMVVYDITKRLSFDHVARWVEELRAHAD----DSAVIMLVGNKA 143
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D G R VP + A+E+ A + + E SA N+DEAF + E
Sbjct: 144 DLSVGK-RAVPTEDAVEF-AETQRLFFSEVSALSGGNVDEAFFRLLE 188
>TAIR|locus:2024276 [details] [associations]
symbol:RAB11c "RAB GTPase 11C" species:3702 "Arabidopsis
thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005886
"plasma membrane" evidence=ISM;IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0000910 "cytokinesis" evidence=IMP]
[GO:0005768 "endosome" evidence=IDA] [GO:0009504 "cell plate"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0016192
"vesicle-mediated transport" evidence=RCA] [GO:0019932
"second-messenger-mediated signaling" evidence=RCA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 EMBL:CP002684 GenomeReviews:CT485782_GR
GO:GO:0005829 GO:GO:0005886 GO:GO:0005794 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0010008 GO:GO:0000910
PROSITE:PS51419 eggNOG:COG1100 GO:GO:0009504 EMBL:AC000132
KO:K07976 HOGENOM:HOG000233968 EMBL:U74669 EMBL:AY045620
EMBL:AY133657 EMBL:AY085684 IPI:IPI00547311 PIR:A86230
RefSeq:NP_172434.1 UniGene:At.20265 ProteinModelPortal:O04486
SMR:O04486 IntAct:O04486 STRING:O04486 PaxDb:O04486 PRIDE:O04486
EnsemblPlants:AT1G09630.1 GeneID:837490 KEGG:ath:AT1G09630
TAIR:At1g09630 InParanoid:O04486 OMA:AKKPCCS PhylomeDB:O04486
ProtClustDB:CLSN2679279 Genevestigator:O04486 GermOnline:AT1G09630
Uniprot:O04486
Length = 217
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 68/162 (41%), Positives = 103/162 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F + K+TIG +F T+ LQ++ + V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLQVEGRTVKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE++ W +E AD +L+GNK
Sbjct: 72 ERYRAITSAYYRGALGALLVYDVTKPTTFENVSRWLKELRDHADSN----IVIMLIGNK- 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
TD R V + A + G + + ETSA E N+++AF
Sbjct: 127 -TDLKHLRAVATEDAQSYAEKEG-LSFIETSALEALNVEKAF 166
>TAIR|locus:2086290 [details] [associations]
symbol:RABA1g "RAB GTPase homolog A1G" species:3702
"Arabidopsis thaliana" [GO:0005525 "GTP binding" evidence=IEA;ISS]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0046686 "response to cadmium ion" evidence=IEP] [GO:0005829
"cytosol" evidence=IDA] [GO:0016192 "vesicle-mediated transport"
evidence=RCA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005829 GO:GO:0005886
GO:GO:0046686 EMBL:CP002686 GenomeReviews:BA000014_GR GO:GO:0007264
GO:GO:0015031 PROSITE:PS51419 eggNOG:COG1100 EMBL:AP000370
KO:K07976 HOGENOM:HOG000233968 HSSP:P35278 EMBL:AK118727
EMBL:BT005565 IPI:IPI00529915 RefSeq:NP_188124.1 UniGene:At.24446
UniGene:At.70390 ProteinModelPortal:Q9LK99 SMR:Q9LK99 PaxDb:Q9LK99
PRIDE:Q9LK99 EnsemblPlants:AT3G15060.1 GeneID:820735
KEGG:ath:AT3G15060 TAIR:At3g15060 InParanoid:Q9LK99 OMA:DHTEANI
PhylomeDB:Q9LK99 ProtClustDB:CLSN2915648 Genevestigator:Q9LK99
Uniprot:Q9LK99
Length = 217
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 68/162 (41%), Positives = 104/162 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +D+K+V QIWDTAGQ
Sbjct: 13 LYKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDEKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E + +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTEAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V + A + A R N + ETSA E N++ AF
Sbjct: 129 DLR--HLRAVSTEDAKAF-AERENTFFMETSALEALNVENAF 167
>ZFIN|ZDB-GENE-070822-21 [details] [associations]
symbol:zgc:171927 "zgc:171927" species:7955 "Danio
rerio" [GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
ZFIN:ZDB-GENE-070822-21 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
EMBL:AL928851 IPI:IPI00858827 Ensembl:ENSDART00000004518
OMA:SKINSAP Bgee:F1RBB0 Uniprot:F1RBB0
Length = 210
Score = 320 (117.7 bits), Expect = 9.1e-29, P = 9.1e-29
Identities = 69/166 (41%), Positives = 108/166 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + ++M+ K V LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIEMEGKTVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W EE + A E +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTEQESFNNVKQWLEEIDRYAC----ENVSKLLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D S +VV A+E+ IP ETSAK N+++AFL +A
Sbjct: 124 DLS--SKKVVDFTTAMEFTESL-KIPLLETSAKNANNVEKAFLTMA 166
>DICTYBASE|DDB_G0284985 [details] [associations]
symbol:rab1D "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0284985 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0045335
GenomeReviews:CM000153_GR GO:GO:0015031 EMBL:AAFI02000073
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 HSSP:P62820
RefSeq:XP_639975.1 ProteinModelPortal:Q54NU2 SMR:Q54NU2
PRIDE:Q54NU2 EnsemblProtists:DDB0229398 GeneID:8624886
KEGG:ddi:DDB_G0284985 OMA:AKDFADS Uniprot:Q54NU2
Length = 204
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/180 (38%), Positives = 111/180 (61%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K++++GDSGVGK+ L+ ++ + ++ + +TIG DF K L +D K + LQIWDTAGQER
Sbjct: 12 KILLIGDSGVGKSCLLLRFADDSWTDTHISTIGVDFKIKTLNLDGKTIKLQIWDTAGQER 71
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
F+++ S++YRGA +LVYD Q +F +++ W E + A ++ +L+GNK T
Sbjct: 72 FRTITSSYYRGAQGIILVYDCTDQDSFTNVKQWMGEIDRYACENVNK----LLVGNK--T 125
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQ 193
D + +VV +A + G IP+ ETSAK N++E F+ +A +KN DI P+
Sbjct: 126 DLVNEKVVDSNQAKSFAESYG-IPFIETSAKNATNVEECFISMAR-DIKNRLADIQETPK 183
>GENEDB_PFALCIPARUM|PFL1500w [details] [associations]
symbol:Rab2 "Rab2, GTPase" species:5833
"Plasmodium falciparum" [GO:0003924 "GTPase activity" evidence=ISS]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 GO:GO:0016787
EMBL:AE014188 KO:K07976 GenomeReviews:AE014188_GR
HOGENOM:HOG000233968 HSSP:P07560 OMA:RRDTFTH RefSeq:XP_001350706.1
ProteinModelPortal:Q8I5A9 SMR:Q8I5A9 PRIDE:Q8I5A9
EnsemblProtists:PFL1500w:mRNA GeneID:811352 KEGG:pfa:PFL1500w
EuPathDB:PlasmoDB:PF3D7_1231100 ProtClustDB:CLSZ2432247
Uniprot:Q8I5A9
Length = 213
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 69/178 (38%), Positives = 107/178 (60%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K I++GD+GVGK+ L+ Q+ +F + TIG +F + + +D+K + LQIWDTAGQ
Sbjct: 7 LFKYIIIGDTGVGKSCLLLQFTDKRFRADHDLTIGVEFGARLINLDNKQIKLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
E F+S+ ++YRGA +LVYD+ ++TF L W +E + ++P H A +L+GNK
Sbjct: 67 ESFRSITRSYYRGAAGALLVYDITRRETFNHLNRWLDEVRQNSNP--HMA--IILVGNKC 122
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
D + R V ++ ++ G I + ETSAK N++EAFL A N +D+Y
Sbjct: 123 DLE---RREVSAEEGAQFARQNGLI-FLETSAKTAKNVEEAFLYTARKIYDNILEDVY 176
>UNIPROTKB|P61007 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9615
"Canis lupus familiaris" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0045335 "phagocytic vesicle"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0005525
"GTP binding" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0048471
"perinuclear region of cytoplasm" evidence=IEA] [GO:0042995 "cell
projection" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0042995
GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901
EMBL:X56385 PIR:B36364 RefSeq:NP_001003152.1 UniGene:Cfa.3637
ProteinModelPortal:P61007 SMR:P61007 MINT:MINT-155827 STRING:P61007
PRIDE:P61007 Ensembl:ENSCAFT00000025007 GeneID:403773
KEGG:cfa:403773 InParanoid:P61007 OMA:SNVEQHA NextBio:20817272
Uniprot:P61007
Length = 207
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>UNIPROTKB|P61006 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0005932 "microtubule basal body" evidence=IEA]
[GO:0014069 "postsynaptic density" evidence=IEA] [GO:0019901
"protein kinase binding" evidence=IEA] [GO:0043025 "neuronal cell
body" evidence=IEA] [GO:0048169 "regulation of long-term neuronal
synaptic plasticity" evidence=IEA] [GO:0051223 "regulation of
protein transport" evidence=IEA] [GO:0055037 "recycling endosome"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0030670 "phagocytic
vesicle membrane" evidence=IEA] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137
"Rab GTPase binding" evidence=ISS] [GO:0045335 "phagocytic vesicle"
evidence=IDA] [GO:0005525 "GTP binding" evidence=IDA] [GO:0019003
"GDP binding" evidence=IDA] [GO:0006904 "vesicle docking involved
in exocytosis" evidence=IDA] [GO:0031513 "nonmotile primary cilium"
evidence=IDA] [GO:0042384 "cilium assembly" evidence=IDA]
[GO:0048210 "Golgi vesicle fusion to target membrane" evidence=IDA]
Reactome:REACT_11123 InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
EMBL:CH471106 GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003
GO:GO:0031513 GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210
PDB:3QBT PDBsum:3QBT HOGENOM:HOG000233968 OrthoDB:EOG4K3KX6
CTD:4218 KO:K07901 OMA:SNVEQHA EMBL:X56741 EMBL:S53268
EMBL:AF498943 EMBL:BT007184 EMBL:CR536583 EMBL:CR542274
EMBL:BC002977 IPI:IPI00028481 PIR:B49647 RefSeq:NP_005361.2
UniGene:Hs.642874 PDB:3TNF PDBsum:3TNF ProteinModelPortal:P61006
SMR:P61006 DIP:DIP-43703N IntAct:P61006 MINT:MINT-1416277
STRING:P61006 PhosphoSite:P61006 DMDM:46810392 PaxDb:P61006
PeptideAtlas:P61006 PRIDE:P61006 DNASU:4218 Ensembl:ENST00000300935
GeneID:4218 KEGG:hsa:4218 UCSC:uc002ndn.4 GeneCards:GC19P016222
HGNC:HGNC:7007 MIM:165040 neXtProt:NX_P61006 PharmGKB:PA30743
InParanoid:P61006 PhylomeDB:P61006 ChiTaRS:RAB8A GenomeRNAi:4218
NextBio:16637 Bgee:P61006 CleanEx:HS_RAB8A Genevestigator:P61006
GermOnline:ENSG00000167461 Uniprot:P61006
Length = 207
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>UNIPROTKB|F2Z5I8 [details] [associations]
symbol:RAB8A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0055037 "recycling endosome" evidence=IEA] [GO:0048210
"Golgi vesicle fusion to target membrane" evidence=IEA] [GO:0042384
"cilium assembly" evidence=IEA] [GO:0031513 "nonmotile primary
cilium" evidence=IEA] [GO:0006904 "vesicle docking involved in
exocytosis" evidence=IEA] [GO:0005932 "microtubule basal body"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0055037 GO:GO:0005932 GO:GO:0042384
GO:GO:0031513 GO:GO:0006904 GO:GO:0048210
GeneTree:ENSGT00700000104031 CTD:4218 KO:K07901 OMA:SNVEQHA
EMBL:CU856246 RefSeq:NP_001230731.1 UniGene:Ssc.24907
ProteinModelPortal:F2Z5I8 SMR:F2Z5I8 PRIDE:F2Z5I8
Ensembl:ENSSSCT00000015126 GeneID:100511006 KEGG:ssc:100511006
Uniprot:F2Z5I8
Length = 207
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>UNIPROTKB|Q4R5P1 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
[GO:0007409 "axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase
binding" evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS]
[GO:0045335 "phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AB169502
ProteinModelPortal:Q4R5P1 SMR:Q4R5P1 PRIDE:Q4R5P1 Uniprot:Q4R5P1
Length = 207
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>MGI|MGI:105306 [details] [associations]
symbol:Rab5c "RAB5C, member RAS oncogene family"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0005768 "endosome" evidence=IEA]
[GO:0005811 "lipid particle" evidence=ISO] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=TAS] [GO:0006810 "transport" evidence=IEA] [GO:0007032
"endosome organization" evidence=IDA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0019003 "GDP binding" evidence=ISO] [GO:0030100 "regulation of
endocytosis" evidence=IDA] [GO:0030139 "endocytic vesicle"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
MGI:MGI:105306 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0015031
GO:GO:0003924 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:BC023027 EMBL:BC027378 EMBL:BC029678 EMBL:M79312
IPI:IPI00224518 PIR:JH0641 RefSeq:NP_077776.2 UniGene:Mm.29829
PDB:1HUQ PDB:1Z07 PDB:1Z0D PDBsum:1HUQ PDBsum:1Z07 PDBsum:1Z0D
ProteinModelPortal:P35278 SMR:P35278 IntAct:P35278 STRING:P35278
PhosphoSite:P35278 PaxDb:P35278 PRIDE:P35278
Ensembl:ENSMUST00000107364 GeneID:19345 KEGG:mmu:19345
EvolutionaryTrace:P35278 NextBio:296361 Bgee:P35278
CleanEx:MM_RAB5C Genevestigator:P35278
GermOnline:ENSMUSG00000019173 Uniprot:P35278
Length = 216
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 73/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ S R C
Sbjct: 196 RTRGVDLQESNPASRSQC 213
>RGD|1359415 [details] [associations]
symbol:Rab1b-ps1 "RAB1B, member RAS oncogene family, pseudogene
1" species:10116 "Rattus norvegicus" [GO:0005525 "GTP binding"
evidence=ISS] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0007264
"small GTPase mediated signal transduction" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016020
"membrane" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:1359415 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005737
GO:GO:0007264 GO:GO:0016020 GO:GO:0015031 PROSITE:PS51419
eggNOG:COG1100 HOVERGEN:HBG009351 HOGENOM:HOG000233968
OrthoDB:EOG48D0WM EMBL:X13905 IPI:IPI00480673 PIR:S06147
UniGene:Rn.155100 ProteinModelPortal:P10536 SMR:P10536
IntAct:P10536 PhosphoSite:P10536 PRIDE:P10536 InParanoid:P10536
Genevestigator:P10536 GermOnline:ENSRNOG00000003753
GermOnline:ENSRNOG00000020253 Uniprot:P10536
Length = 201
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 63/166 (37%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTVTSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G +P+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-VPFLETSAKNATNVEQAFMTMA 166
>RGD|620879 [details] [associations]
symbol:Rab10 "RAB10, member RAS oncogene family" species:10116
"Rattus norvegicus" [GO:0000145 "exocyst" evidence=ISS] [GO:0003674
"molecular_function" evidence=ND] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005525 "GTP binding" evidence=ISO;ISS]
[GO:0005768 "endosome" evidence=ISO;ISS] [GO:0005789 "endoplasmic
reticulum membrane" evidence=ISO;ISS] [GO:0005794 "Golgi apparatus"
evidence=ISO;ISS] [GO:0005802 "trans-Golgi network" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO;ISS] [GO:0006893 "Golgi
to plasma membrane transport" evidence=IMP] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0007409
"axonogenesis" evidence=IMP] [GO:0016020 "membrane" evidence=IDA]
[GO:0016192 "vesicle-mediated transport" evidence=ISO;ISS]
[GO:0016197 "endosomal transport" evidence=ISO;ISS] [GO:0019003
"GDP binding" evidence=ISO;ISS] [GO:0030670 "phagocytic vesicle
membrane" evidence=IEA] [GO:0030859 "polarized epithelial cell
differentiation" evidence=ISS] [GO:0031489 "myosin V binding"
evidence=ISO] [GO:0032593 "insulin-responsive compartment"
evidence=ISO;ISS] [GO:0032869 "cellular response to insulin
stimulus" evidence=ISO;ISS] [GO:0043001 "Golgi to plasma membrane
protein transport" evidence=ISS] [GO:0045200 "establishment of
neuroblast polarity" evidence=IMP] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0055037 "recycling endosome"
evidence=ISO;ISS] [GO:0055038 "recycling endosome membrane"
evidence=IEA] [GO:0061467 "basolateral protein localization"
evidence=ISS] [GO:0071236 "cellular response to antibiotic"
evidence=IEP] [GO:0071782 "endoplasmic reticulum tubular network"
evidence=ISO;ISS] [GO:0071786 "endoplasmic reticulum tubular
network organization" evidence=ISO;ISS] [GO:0072372 "primary
cilium" evidence=ISO;IDA] [GO:0072659 "protein localization to
plasma membrane" evidence=ISO;ISS] [GO:0097051 "establishment of
protein localization to endoplasmic reticulum membrane"
evidence=ISO;ISS] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
RGD:620879 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0030670 GO:GO:0016020
GO:GO:0071236 GO:GO:0032869 GO:GO:0016197 GO:GO:0055037
GO:GO:0007409 GO:GO:0005802 GO:GO:0072372 GO:GO:0072659
PROSITE:PS51419 GO:GO:0032593 GO:GO:0043001 GO:GO:0055038
GO:GO:0019003 HOVERGEN:HBG009351 GO:GO:0045200 GO:GO:0030859
EMBL:M83677 IPI:IPI00196790 PIR:B42148 UniGene:Rn.65864
ProteinModelPortal:P35281 SMR:P35281 IntAct:P35281
PhosphoSite:P35281 PRIDE:P35281 Genevestigator:P35281
Uniprot:P35281
Length = 200
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 78/196 (39%), Positives = 117/196 (59%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TI DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIEIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LL NK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDQHANEDVERMLLRNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D RVVP+ K E A I +FETSAK + NI++AFL + E L+ K +
Sbjct: 125 DMD--HKRVVPKGKG-EQIAREHRIRFFETSAKANINIEKAFLTLPEDILR---KTPVKE 178
Query: 192 PQGISETVSEVEQRGG 207
P SE V ++ GG
Sbjct: 179 PN--SENV-DISSGGG 191
>TAIR|locus:2205603 [details] [associations]
symbol:RA-5 "RAS 5" species:3702 "Arabidopsis thaliana"
[GO:0005525 "GTP binding" evidence=IEA;ISS] [GO:0005794 "Golgi
apparatus" evidence=ISM] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=IMP;IDA] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005773 "vacuole" evidence=IDA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000139 "Golgi membrane"
evidence=IDA] [GO:0032588 "trans-Golgi network membrane"
evidence=IDA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005886 GO:GO:0005773 GO:GO:0046686
GO:GO:0007264 GO:GO:0000139 GO:GO:0032588 GO:GO:0015031
PROSITE:PS51419 GO:GO:0006888 eggNOG:COG1100 EMBL:U89959 KO:K07976
HOGENOM:HOG000233968 EMBL:AY052333 EMBL:AY061905 EMBL:D01027
IPI:IPI00547166 PIR:B86153 PIR:PS0279 RefSeq:NP_171715.1
UniGene:At.21490 ProteinModelPortal:P28188 SMR:P28188 STRING:P28188
PaxDb:P28188 PRIDE:P28188 EnsemblPlants:AT1G02130.1 GeneID:837023
KEGG:ath:AT1G02130 TAIR:At1g02130 InParanoid:P28188 OMA:VESYIST
PhylomeDB:P28188 ProtClustDB:CLSN2914624 Genevestigator:P28188
Uniprot:P28188
Length = 203
Score = 319 (117.4 bits), Expect = 1.2e-28, P = 1.2e-28
Identities = 69/195 (35%), Positives = 119/195 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + + + Y +TIG DF + ++ D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDSYVESYISTIGVDFKIRTVEQDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV +++F +++ W E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDEESFNNVKQWLSEIDRYASDNVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D +R +P + A + G IP+ ETSAK+ N+++AF+ ++ ++K Q
Sbjct: 124 DLT--ENRAIPYETAKAFADEIG-IPFMETSAKDATNVEQAFMAMSA-SIKERMAS---Q 176
Query: 192 PQGISETVSEVEQRG 206
P G + V+ RG
Sbjct: 177 PAGNNARPPTVQIRG 191
>UNIPROTKB|A4FV54 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9913 "Bos
taurus" [GO:0045335 "phagocytic vesicle" evidence=ISS] [GO:0019003
"GDP binding" evidence=ISS] [GO:0005525 "GTP binding" evidence=ISS]
[GO:0017137 "Rab GTPase binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0048471 "perinuclear region of
cytoplasm" evidence=IEA] [GO:0030670 "phagocytic vesicle membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0055037 "recycling
endosome" evidence=IEA] [GO:0048210 "Golgi vesicle fusion to target
membrane" evidence=IEA] [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0031513 "nonmotile primary cilium" evidence=IEA] [GO:0006904
"vesicle docking involved in exocytosis" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0005794
GO:GO:0048471 GO:GO:0007264 GO:GO:0015031 GO:GO:0055037
GO:GO:0007409 PROSITE:PS51419 GO:GO:0005932 GO:GO:0042384
GO:GO:0017137 eggNOG:COG1100 GO:GO:0019003 GO:GO:0031513
GO:GO:0006904 HOVERGEN:HBG009351 GO:GO:0048210 HOGENOM:HOG000233968
OrthoDB:EOG4K3KX6 GeneTree:ENSGT00700000104031 EMBL:BC123755
IPI:IPI00718035 RefSeq:NP_001098951.1 UniGene:Bt.9871
ProteinModelPortal:A4FV54 SMR:A4FV54 STRING:A4FV54 PRIDE:A4FV54
Ensembl:ENSBTAT00000021408 GeneID:100125881 KEGG:bta:100125881
CTD:4218 InParanoid:A4FV54 KO:K07901 OMA:CDANDKR NextBio:20788864
Uniprot:A4FV54
Length = 207
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFYTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>WB|WBGene00004285 [details] [associations]
symbol:rab-37 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
KO:K07976 GeneTree:ENSGT00700000104031 EMBL:FO081187
UniGene:Cel.23034 GeneID:180696 KEGG:cel:CELE_W01H2.3 CTD:180696
NextBio:910498 RefSeq:NP_001041294.1 ProteinModelPortal:G5EFA6
SMR:G5EFA6 EnsemblMetazoa:W01H2.3b WormBase:W01H2.3b OMA:KLKYGFV
Uniprot:G5EFA6
Length = 223
Score = 318 (117.0 bits), Expect = 1.5e-28, P = 1.5e-28
Identities = 80/206 (38%), Positives = 123/206 (59%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKF-SQQYKATIGADFVTKELQMDDKLV 61
+ ++M KV++LGDS GKT L+ +Y F + + +T+G D+ K + M DK V
Sbjct: 20 LDLDMAELTTFKVMLLGDSCTGKTCLLIRYKDGAFLNNNFISTVGIDYRNKLITMGDKKV 79
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
LQIWDTAGQERF+S+ +++YR AD +LVYD+ + +FE+ +NW + +K+ G+ EA
Sbjct: 80 KLQIWDTAGQERFRSVTTSYYRDADALLLVYDIANRASFENCRNWLSQ-IKEY--GK-EA 135
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWC-AYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
L+GNK D R VP + AY+ IP+ ETSAK N+D AFL +AE
Sbjct: 136 VQVTLVGNKCDLP----RAVPTDEGKRLAEAYQ--IPFMETSAKTGFNVDRAFLGLAERM 189
Query: 181 LKNEHKDIYYQPQG-ISETVSEVEQR 205
LK ++ + P G +++T+S + +
Sbjct: 190 LKLKYG---FVPGGEMADTISVADTK 212
>DICTYBASE|DDB_G0290779 [details] [associations]
symbol:rabL "Rab GTPase" species:44689 "Dictyostelium
discoideum" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005575
"cellular_component" evidence=ND] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0000166 "nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
dictyBase:DDB_G0290779 GO:GO:0005525 TIGRFAMs:TIGR00231
GO:GO:0005886 GO:GO:0007264 GenomeReviews:CM000154_GR
PROSITE:PS51419 eggNOG:COG1100 EMBL:AAFI02000171 KO:K07976
HSSP:P32939 RefSeq:XP_635533.1 ProteinModelPortal:Q54FK7
EnsemblProtists:DDB0191360 GeneID:8627830 KEGG:ddi:DDB_G0290779
OMA:LEHYSIV ProtClustDB:CLSZ2429633 Uniprot:Q54FK7
Length = 204
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/187 (36%), Positives = 109/187 (58%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+ + +LK+I LGDS VGKTSL YV ++ +IG D+ KEL++++K V L +WD
Sbjct: 3 EEKTMLKIITLGDSNVGKTSLFYHYVNGEYRYNRPPSIGPDYFIKELKVENKHVFLMVWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T GQERFQ+ ++RGA+C L +D++ +++F +L W +E +K + PFVL+
Sbjct: 63 TCGQERFQAFSPPYFRGANCYTLCFDIHNEESFINLGKWMDEIIKYC----YGNIPFVLV 118
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAY---RG---NIPYFETSAKEDCNIDEAFLCVAEIAL 181
G K D + + + + + +WC +G + YFETSAK N+ E + A++AL
Sbjct: 119 GTKSDIPR-TDKSISKARIEQWCKNIEDQGIIDKVHYFETSAKLSQNVTELYNVAAKLAL 177
Query: 182 KNEHKDI 188
EH I
Sbjct: 178 --EHYSI 182
>DICTYBASE|DDB_G0277867 [details] [associations]
symbol:rab1B "Rab GTPase" species:44689
"Dictyostelium discoideum" [GO:0015031 "protein transport"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0016020 "membrane" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 dictyBase:DDB_G0277867 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264
GenomeReviews:CM000152_GR GO:GO:0015031 EMBL:AAFI02000023
PROSITE:PS51419 eggNOG:COG1100 KO:K07976 EMBL:L21010
RefSeq:XP_642309.1 ProteinModelPortal:P34140 SMR:P34140
PRIDE:P34140 EnsemblProtists:DDB0214820 GeneID:8621515
KEGG:ddi:DDB_G0277867 OMA:MIMASEI Uniprot:P34140
Length = 206
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/166 (37%), Positives = 107/166 (64%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + + +D K++ LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTINLDGKIIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV +F +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDHVSFNNVKQWMQEIQRYAC----DSVTRLLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D ++V A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLI--EKKIVDTSTAREYADSVG-IPFLETSAKSSANVEQAFMIMA 166
>UNIPROTKB|Q58DS9 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9913 "Bos
taurus" [GO:0019003 "GDP binding" evidence=ISS] [GO:0042470
"melanosome" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN EMBL:BT021518 EMBL:BC118226 IPI:IPI00694198
RefSeq:NP_001029915.1 UniGene:Bt.5451 ProteinModelPortal:Q58DS9
SMR:Q58DS9 STRING:Q58DS9 PRIDE:Q58DS9 Ensembl:ENSBTAT00000015581
GeneID:613749 KEGG:bta:613749 CTD:5878 InParanoid:Q58DS9 KO:K07889
NextBio:20898747 Uniprot:Q58DS9
Length = 216
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 72/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-AEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ + R C
Sbjct: 196 RNRGVDLQENNPASRSQC 213
>UNIPROTKB|F2Z560 [details] [associations]
symbol:RAB5C "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0005811 GO:GO:0015031 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 OMA:VDLQESN CTD:5878
KO:K07889 EMBL:CU856598 RefSeq:NP_001231183.1 UniGene:Ssc.19390
UniGene:Ssc.82797 ProteinModelPortal:F2Z560 SMR:F2Z560 PRIDE:F2Z560
Ensembl:ENSSSCT00000018954 GeneID:100523862 KEGG:ssc:100523862
ArrayExpress:F2Z560 Uniprot:F2Z560
Length = 216
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 72/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-AEDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPG 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ + R C
Sbjct: 196 RNRGVDLQENNPASRSQC 213
>UNIPROTKB|Q4R8X3 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9541
"Macaca fascicularis" [GO:0005525 "GTP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005737 GO:GO:0007264 GO:GO:0016020
GO:GO:0015031 PROSITE:PS51419 HOVERGEN:HBG009351 EMBL:AB168324
HSSP:P62820 ProteinModelPortal:Q4R8X3 SMR:Q4R8X3 PRIDE:Q4R8X3
Uniprot:Q4R8X3
Length = 201
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 63/166 (37%), Positives = 110/166 (66%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV ++++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDRESYANVKQWLQEIDRYASENVNK----LLVGNKS 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDNTTAKEFADSLG-IPFLETSAKNATNVEQAFMTMA 166
>UNIPROTKB|Q5R4A3 [details] [associations]
symbol:RAB8A "Ras-related protein Rab-8A" species:9601
"Pongo abelii" [GO:0005525 "GTP binding" evidence=ISS] [GO:0007409
"axonogenesis" evidence=ISS] [GO:0017137 "Rab GTPase binding"
evidence=ISS] [GO:0019003 "GDP binding" evidence=ISS] [GO:0045335
"phagocytic vesicle" evidence=ISS] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471 GO:GO:0007264 GO:GO:0015031
GO:GO:0042995 GO:GO:0007409 PROSITE:PS51419 GO:GO:0017137
GO:GO:0019003 HOVERGEN:HBG009351 HSSP:P55258 CTD:4218 KO:K07901
EMBL:CR861352 RefSeq:NP_001127003.1 UniGene:Pab.18475
ProteinModelPortal:Q5R4A3 SMR:Q5R4A3 PRIDE:Q5R4A3 GeneID:100174026
KEGG:pon:100174026 InParanoid:Q5R4A3 Uniprot:Q5R4A3
Length = 207
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 70/189 (37%), Positives = 117/189 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSEDAFNSTFISTIGIDFKIRTIELDGKRIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIRNWIRNIEEHASADVEK----MILGNKR 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + R V +++ E A I + ETSAK + N++ AF +A +I K + K
Sbjct: 124 DVN--DKRQVSKERG-EKLALDYGIKFMETSAKANINVENAFFTLARDIKAKMDKKLEGN 180
Query: 191 QPQGISETV 199
PQG ++ V
Sbjct: 181 SPQGSNQGV 189
>WB|WBGene00004272 [details] [associations]
symbol:rab-8 species:6239 "Caenorhabditis elegans"
[GO:0003924 "GTPase activity" evidence=IEA;ISS] [GO:0005525 "GTP
binding" evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0006184 "GTP catabolic process"
evidence=IEA] [GO:0006886 "intracellular protein transport"
evidence=IEA] [GO:0006913 "nucleocytoplasmic transport"
evidence=IEA] [GO:0007165 "signal transduction" evidence=IEA]
[GO:0005622 "intracellular" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040039 "inductive cell migration" evidence=IMP]
[GO:0071688 "striated muscle myosin thick filament assembly"
evidence=IMP] [GO:0009306 "protein secretion" evidence=IMP]
[GO:0006915 "apoptotic process" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0030538 "embryonic genitalia
morphogenesis" evidence=IMP] [GO:0010008 "endosome membrane"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005886 "plasma membrane" evidence=IDA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0009792 GO:GO:0006915 GO:GO:0007264 GO:GO:0003924
GO:GO:0071688 GO:GO:0048477 GO:GO:0009306 GO:GO:0010008
GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/180 (38%), Positives = 114/180 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLLGN 129
ERF+++ +A+YRGA +LVYD+ +++FE+++NW ++ + EH A +++GN
Sbjct: 68 ERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIE--EHAASDVERMIIGN 121
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDI 188
K D + R V + + E A + ETSAK + NIDEAF +A +I K E ++
Sbjct: 122 KCDIE--ERREVSRDRG-EQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEM 178
>UNIPROTKB|G5EFC1 [details] [associations]
symbol:rab-8 "Rab8" species:6239 "Caenorhabditis elegans"
[GO:0006184 "GTP catabolic process" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0009792 GO:GO:0006915
GO:GO:0007264 GO:GO:0003924 GO:GO:0071688 GO:GO:0048477
GO:GO:0009306 GO:GO:0010008 GO:GO:0040039 GO:GO:0030538 HSSP:P07560
GeneTree:ENSGT00700000104031 KO:K07901 OMA:SNVEQHA EMBL:AB112929
EMBL:FO080997 RefSeq:NP_491199.2 UniGene:Cel.23073
ProteinModelPortal:G5EFC1 SMR:G5EFC1 EnsemblMetazoa:D1037.4
GeneID:171935 KEGG:cel:CELE_D1037.4 CTD:171935 WormBase:D1037.4
NextBio:873315 Uniprot:G5EFC1
Length = 211
Score = 317 (116.6 bits), Expect = 1.9e-28, P = 1.9e-28
Identities = 69/180 (38%), Positives = 114/180 (63%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDSFNNSFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLLGN 129
ERF+++ +A+YRGA +LVYD+ +++FE+++NW ++ + EH A +++GN
Sbjct: 68 ERFRTITTAYYRGAMGIILVYDITNERSFENIKNW----IRNIE--EHAASDVERMIIGN 121
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDI 188
K D + R V + + E A + ETSAK + NIDEAF +A +I K E ++
Sbjct: 122 KCDIE--ERREVSRDRG-EQLAIEYGTKFLETSAKANLNIDEAFFTLARDIKSKMEQNEM 178
>ASPGD|ASPL0000074235 [details] [associations]
symbol:srgG species:162425 "Emericella nidulans"
[GO:0005525 "GTP binding" evidence=IDA] [GO:0005769 "early
endosome" evidence=IDA] [GO:0005770 "late endosome" evidence=IDA]
[GO:0006913 "nucleocytoplasmic transport" evidence=IEA] [GO:0006184
"GTP catabolic process" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0005741
"mitochondrial outer membrane" evidence=IEA] [GO:0003924 "GTPase
activity" evidence=IEA] [GO:0006623 "protein targeting to vacuole"
evidence=IEA] [GO:0006897 "endocytosis" evidence=IEA] [GO:0000011
"vacuole inheritance" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 EMBL:BN001303 eggNOG:COG1100 EMBL:AACD01000084
KO:K07976 HOGENOM:HOG000233968 OMA:RTIKYEI OrthoDB:EOG47WRXZ
RefSeq:XP_662519.1 ProteinModelPortal:Q5B3G5 SMR:Q5B3G5
EnsemblFungi:CADANIAT00005485 GeneID:2872716 KEGG:ani:AN4915.2
Uniprot:Q5B3G5
Length = 258
Score = 260 (96.6 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 52/141 (36%), Positives = 85/141 (60%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K + +K+++LG++ VGK+SL+ ++V N F + + TIGA F+T++ + + + +IWD
Sbjct: 11 KPSSSVKLVLLGEAAVGKSSLVLRFVNNDFQENKEPTIGAAFLTQKCSLPSRTIKFEIWD 70
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF SL +YR A ++VYDV + ++W E +QA PG L+
Sbjct: 71 TAGQERFASLAPMYYRNAQAALVVYDVTKPSSLTKAKHWVAELQRQASPG----IVIALV 126
Query: 128 GNKID--TDGGSSRVVPQKKA 146
GNK+D DGG + +++A
Sbjct: 127 GNKLDLTNDGGETPAETEREA 147
Score = 72 (30.4 bits), Expect = 2.0e-28, Sum P(2) = 2.0e-28
Identities = 16/46 (34%), Positives = 25/46 (54%)
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D G +R VP ++A + G + +FETSAK N+ + F +A
Sbjct: 163 DNTPGDARKVPTREASTYADEEGLL-FFETSAKTGLNVTDVFTAIA 207
>UNIPROTKB|E1C080 [details] [associations]
symbol:RAB8B "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0005778 "peroxisomal membrane" evidence=IEA]
[GO:0045046 "protein import into peroxisome membrane" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0007264 GO:GO:0005778
GO:GO:0045046 GeneTree:ENSGT00700000104031 OMA:TSFFRCL
EMBL:AADN02040439 EMBL:AADN02040440 EMBL:AADN02040441
IPI:IPI00585001 Ensembl:ENSGALT00000005515 Uniprot:E1C080
Length = 178
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 69/176 (39%), Positives = 109/176 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLLFRFSEDAFNTTFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++NW + A ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITNEKSFDNIKNWIRNIEEHASSDVER----MILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHK 186
D + R V ++K E A I + ETSAK N++EAF +A +I K K
Sbjct: 124 DMN--EKRQVSKEKG-EKLAIDYGIKFLETSAKSSINVEEAFFTLARDIMTKLNRK 176
>UNIPROTKB|Q5ZHW4 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9031
"Gallus gallus" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=IEA] [GO:0031901 "early endosome membrane"
evidence=IEA] [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003 HOVERGEN:HBG009351
HSSP:P20339 EMBL:AJ721020 IPI:IPI00586484 RefSeq:NP_001186777.1
UniGene:Gga.17824 ProteinModelPortal:Q5ZHW4 SMR:Q5ZHW4 PRIDE:Q5ZHW4
GeneID:100529061 KEGG:gga:100529061 CTD:5869 KO:K07888
Uniprot:Q5ZHW4
Length = 215
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 67/171 (39%), Positives = 107/171 (62%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ Q+TF + W +E +QA P + L GNK D
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKADL 137
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
S R+V ++A + A ++ + ETSAK N+++ FL +A+ K+E
Sbjct: 138 --ASKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSE 185
>UNIPROTKB|P51147 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9615
"Canis lupus familiaris" [GO:0019003 "GDP binding" evidence=ISS]
[GO:0042470 "melanosome" evidence=IEA] [GO:0031901 "early endosome
membrane" evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0030139 "endocytic vesicle" evidence=IEA] [GO:0030100
"regulation of endocytosis" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0005811 "lipid particle"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0005525 "GTP binding" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0019003 HOVERGEN:HBG009351
HOGENOM:HOG000233968 GeneTree:ENSGT00640000091139 OrthoDB:EOG4Z0B6M
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:Z27110 PIR:S65933
RefSeq:NP_001003261.1 UniGene:Cfa.3802 ProteinModelPortal:P51147
SMR:P51147 STRING:P51147 PRIDE:P51147 Ensembl:ENSCAFT00000024768
GeneID:403941 KEGG:cfa:403941 InParanoid:P51147 NextBio:20817431
Uniprot:P51147
Length = 216
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 72/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNAAGAPS 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ + R C
Sbjct: 196 RNRGVDLQENSPASRSQC 213
>UNIPROTKB|P51148 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0005811 "lipid particle" evidence=IDA]
[GO:0019003 "GDP binding" evidence=IDA] [GO:0003924 "GTPase
activity" evidence=TAS] [GO:0006184 "GTP catabolic process"
evidence=TAS] Reactome:REACT_11123 InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005886
GO:GO:0042470 GO:GO:0007264 GO:GO:0031901 GO:GO:0005811
GO:GO:0015031 EMBL:CH471152 GO:GO:0003924 GO:GO:0030100
GO:GO:0030139 PROSITE:PS51419 GO:GO:0007032 eggNOG:COG1100
GO:GO:0019003 HOVERGEN:HBG009351 EMBL:AC105024 EMBL:AC099811
HOGENOM:HOG000233968 OrthoDB:EOG4Z0B6M CTD:5878 KO:K07889
EMBL:U18420 EMBL:U11293 EMBL:AF141304 EMBL:AF498938 EMBL:AK310234
EMBL:CR541901 EMBL:BT019484 EMBL:AC003104 EMBL:BC106039
EMBL:BC114439 IPI:IPI00016339 IPI:IPI01021644 PIR:I38703
RefSeq:NP_001238968.1 RefSeq:NP_004574.2 RefSeq:NP_958842.1
UniGene:Hs.650382 ProteinModelPortal:P51148 SMR:P51148
IntAct:P51148 STRING:P51148 PhosphoSite:P51148 DMDM:38258923
PaxDb:P51148 PeptideAtlas:P51148 PRIDE:P51148 DNASU:5878
Ensembl:ENST00000346213 Ensembl:ENST00000393860
Ensembl:ENST00000547517 Ensembl:ENST00000565751 GeneID:5878
KEGG:hsa:5878 UCSC:uc002hyz.3 GeneCards:GC17M040276 HGNC:HGNC:9785
HPA:HPA003426 MIM:604037 neXtProt:NX_P51148 PharmGKB:PA34145
InParanoid:P51148 PhylomeDB:P51148 GenomeRNAi:5878 NextBio:22840
ArrayExpress:P51148 Bgee:P51148 CleanEx:HS_RAB5C
Genevestigator:P51148 GermOnline:ENSG00000108774 Uniprot:P51148
Length = 216
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 72/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ + R C
Sbjct: 196 RNRGVDLQENNPASRSQC 213
>UNIPROTKB|Q5R7L7 [details] [associations]
symbol:RAB5C "Ras-related protein Rab-5C" species:9601
"Pongo abelii" [GO:0019003 "GDP binding" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0007264 GO:GO:0031901
GO:GO:0005811 GO:GO:0015031 PROSITE:PS51419 GO:GO:0019003
HOVERGEN:HBG009351 HSSP:P35278 GeneTree:ENSGT00640000091139
OMA:VDLQESN CTD:5878 KO:K07889 EMBL:CR860097 RefSeq:NP_001127529.1
UniGene:Pab.17478 ProteinModelPortal:Q5R7L7 SMR:Q5R7L7 PRIDE:Q5R7L7
Ensembl:ENSPPYT00000009823 GeneID:100174605 KEGG:pon:100174605
InParanoid:Q5R7L7 Uniprot:Q5R7L7
Length = 216
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 72/198 (36%), Positives = 113/198 (57%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 23 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTVCLDDTTVKFEIWDTAGQER 82
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ TF +NW +E +QA P L GNK D
Sbjct: 83 YHSLAPMYYRGAQAAIVVYDITNTDTFARAKNWVKELQRQASPN----IVIALAGNKADL 138
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP- 192
S R V ++A + A ++ + ETSAK N++E F+ +A+ KNE ++ P
Sbjct: 139 --ASKRAVEFQEAQAY-ADDNSLLFMETSAKTAMNVNEIFMAIAKKLPKNEPQNATGAPG 195
Query: 193 --QGISETVSEVEQRGGC 208
+G+ + R C
Sbjct: 196 RNRGVDLQENNPASRSQC 213
>ZFIN|ZDB-GENE-040426-873 [details] [associations]
symbol:rab1ba "zRAB1B, member RAS oncogene family
a" species:7955 "Danio rerio" [GO:0005525 "GTP binding"
evidence=IEA] [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 ZFIN:ZDB-GENE-040426-873
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031
HOVERGEN:HBG009351 HOGENOM:HOG000233968 HSSP:P07560
GeneTree:ENSGT00700000104049 OrthoDB:EOG48D0WM KO:K07875
OMA:IDSTPVR EMBL:CABZ01038439 EMBL:CABZ01038440 EMBL:CU570987
EMBL:BC047816 IPI:IPI00491824 RefSeq:NP_957436.1 UniGene:Dr.78500
SMR:Q7ZUV5 STRING:Q7ZUV5 Ensembl:ENSDART00000055810 GeneID:394117
KEGG:dre:394117 CTD:394117 InParanoid:Q7ZUV5 NextBio:20815071
Uniprot:Q7ZUV5
Length = 201
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 63/166 (37%), Positives = 109/166 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESYNNVKQWLQEIDRYASENVNK----LLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ IP+ ETSAK N+++AF+ +A
Sbjct: 124 DLT--TKKVVDYTTAKEFADSLA-IPFLETSAKNATNVEQAFMTMA 166
>ZFIN|ZDB-GENE-050706-113 [details] [associations]
symbol:rab25b "RAB25, member RAS oncogene family b"
species:7955 "Danio rerio" [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007264 "small
GTPase mediated signal transduction" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 ZFIN:ZDB-GENE-050706-113 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 GO:GO:0015031 eggNOG:COG1100
HOVERGEN:HBG009351 KO:K07906 EMBL:BC098608 IPI:IPI00629715
RefSeq:NP_001025142.1 UniGene:Dr.152897 ProteinModelPortal:Q4KME3
SMR:Q4KME3 GeneID:574424 KEGG:dre:574424 InParanoid:Q4KME3
NextBio:20891932 Uniprot:Q4KME3
Length = 210
Score = 316 (116.3 bits), Expect = 2.4e-28, P = 2.4e-28
Identities = 69/178 (38%), Positives = 112/178 (62%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++G+SGVGK++L++++ N+FS + TIG +F T+ +Q++ + QIWDTAG
Sbjct: 10 VFKVVLIGESGVGKSNLLSRFTKNEFSHDSRTTIGVEFSTRTVQLNGLTIKAQIWDTAGL 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD++ T+ES + W +E ADP H +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDISKHLTYESAERWLKELYDHADP--HIVV--MLVGNKS 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDI 188
D + R VP + A ++ A + + + ETSA E N++ AF V EI K K++
Sbjct: 126 DL--AAVRSVPTEDAKDF-AEKNGLLFKETSALESVNVEAAFNTVLTEIHKKVNSKEV 180
>FB|FBgn0015793 [details] [associations]
symbol:Rab19 "Rab19" species:7227 "Drosophila melanogaster"
[GO:0005525 "GTP binding" evidence=ISS] [GO:0005097 "Rab GTPase
activator activity" evidence=ISS] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0031982 "vesicle" evidence=ISS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0007264 EMBL:AE014296 GO:GO:0015031
eggNOG:COG1100 GO:GO:0005097 KO:K07976 HSSP:P07560
GeneTree:ENSGT00700000104044 OMA:LIGDCGT EMBL:AY071400 EMBL:D84348
RefSeq:NP_523970.1 UniGene:Dm.2555 SMR:O18339
EnsemblMetazoa:FBtr0076705 EnsemblMetazoa:FBtr0331832 GeneID:38930
KEGG:dme:Dmel_CG7062 UCSC:CG7062-RA CTD:38930 FlyBase:FBgn0015793
InParanoid:O18339 OrthoDB:EOG4PG4GW GenomeRNAi:38930 NextBio:811064
Uniprot:O18339
Length = 219
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 64/175 (36%), Positives = 107/175 (61%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GD G GKT +++++ + +++ TIG DF K + ++ K + LQIWDTAGQ
Sbjct: 21 LFKIVLIGDCGTGKTCIVDRFKTGNYIERHGNTIGVDFSMKTIAVEGKQIKLQIWDTAGQ 80
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ ++YR A+ ++VYD+ + +F +LQ W EE + +L+GNK
Sbjct: 81 ERFRTITQSYYRSANGVLIVYDITKRSSFSNLQKWIEEVRRYTASN----VLIILVGNKC 136
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPY-FETSAKEDCNIDEAFLCVAEIALKNEH 185
D + R V ++A + C Y I + ETSAKE+ N+++AF C+A LK +H
Sbjct: 137 DLE--EQREVDFEEARQMCQYIPEILFVMETSAKENMNVEDAFRCLAN-ELKRQH 188
>UNIPROTKB|G3MYN4 [details] [associations]
symbol:RAB1B "Ras-related protein Rab-1B" species:9913 "Bos
taurus" [GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005739
"mitochondrion" evidence=IEA] [GO:0005525 "GTP binding"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
[GO:0007264 "small GTPase mediated signal transduction"
evidence=IEA] InterPro:IPR001806 InterPro:IPR003579
InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449 SMART:SM00175
GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0005739 GO:GO:0005794
GO:GO:0007264 GO:GO:0015031 GeneTree:ENSGT00700000104049
OMA:MIMASEI EMBL:DAAA02063587 Ensembl:ENSBTAT00000064628
Uniprot:G3MYN4
Length = 197
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 64/171 (37%), Positives = 112/171 (65%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 3 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 62
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+++ +++ W +E + A ++ +++GNK
Sbjct: 63 ERFRTITSSYYRGAHGIIVVYDVTDQESYANVKQWLQEIDRYASENVNK----LIVGNKS 118
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIAL 181
D + +VV A E+ G IP+ TSAK N+++AF+ +A EI +
Sbjct: 119 DLT--TKKVVDNTTAKEFADSLG-IPFLRTSAKNATNVEQAFMTMAAEIKI 166
>UNIPROTKB|E2QW69 [details] [associations]
symbol:RAB5B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0030742 "GTP-dependent protein binding"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0030100 "regulation of endocytosis" evidence=IEA] [GO:0007032
"endosome organization" evidence=IEA] [GO:0005768 "endosome"
evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0007264 "small GTPase
mediated signal transduction" evidence=IEA] InterPro:IPR001806
InterPro:IPR003579 InterPro:IPR005225 Pfam:PF00071 PRINTS:PR00449
SMART:SM00175 GO:GO:0005525 TIGRFAMs:TIGR00231 GO:GO:0007264
GO:GO:0015031 GO:GO:0005768 GO:GO:0030100 GO:GO:0030139
GO:GO:0007032 GeneTree:ENSGT00640000091139 CTD:5869 KO:K07888
OMA:GTQGKIC EMBL:AAEX03006917 RefSeq:XP_531627.2
ProteinModelPortal:E2QW69 SMR:E2QW69 PRIDE:E2QW69
Ensembl:ENSCAFT00000000142 GeneID:474394 KEGG:cfa:474394
NextBio:20850419 Uniprot:E2QW69
Length = 215
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 66/175 (37%), Positives = 110/175 (62%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ Q+TF + W +E +QA P + L GNK D
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKADL 137
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
+ R+V ++A + A ++ + ETSAK N+++ FL +A+ K+E +++
Sbjct: 138 --ANKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNL 189
>UNIPROTKB|P61020 [details] [associations]
symbol:RAB5B "Ras-related protein Rab-5B" species:9606
"Homo sapiens" [GO:0007264 "small GTPase mediated signal
transduction" evidence=IEA] [GO:0005525 "GTP binding" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0007032 "endosome
organization" evidence=IEA] [GO:0030100 "regulation of endocytosis"
evidence=IEA] [GO:0030139 "endocytic vesicle" evidence=IEA]
[GO:0005886 "plasma membrane" evidence=IEA] [GO:0031901 "early
endosome membrane" evidence=IEA] [GO:0042470 "melanosome"
evidence=IEA] [GO:0030742 "GTP-dependent protein binding"
evidence=IDA] [GO:0005768 "endosome" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019003 "GDP binding"
evidence=IDA] [GO:0003924 "GTPase activity" evidence=TAS]
[GO:0016020 "membrane" evidence=TAS] [GO:0005622 "intracellular"
evidence=IDA] [GO:0006184 "GTP catabolic process" evidence=TAS]
InterPro:IPR001806 InterPro:IPR003579 InterPro:IPR005225
Pfam:PF00071 PRINTS:PR00449 SMART:SM00175 GO:GO:0005525
TIGRFAMs:TIGR00231 GO:GO:0005886 GO:GO:0042470 GO:GO:0007264
GO:GO:0031901 GO:GO:0015031 GO:GO:0005768 GO:GO:0003924
EMBL:CH471054 GO:GO:0030100 GO:GO:0030139 PROSITE:PS51419
GO:GO:0007032 eggNOG:COG1100 GO:GO:0030742 GO:GO:0019003
HOVERGEN:HBG009351 EMBL:AC034102 OrthoDB:EOG4Z0B6M CTD:5869
KO:K07888 EMBL:X54871 EMBL:AF498937 EMBL:AK292597 EMBL:AK296517
EMBL:BX537408 EMBL:BC032740 EMBL:BC040143 EMBL:BC050558
EMBL:BC056422 EMBL:BC065298 IPI:IPI00017344 PIR:A43925
RefSeq:NP_001238965.1 RefSeq:NP_001238966.1 RefSeq:NP_002859.1
UniGene:Hs.157659 PDB:2HEI PDBsum:2HEI ProteinModelPortal:P61020
SMR:P61020 IntAct:P61020 STRING:P61020 PhosphoSite:P61020
DMDM:46577637 PaxDb:P61020 PRIDE:P61020 DNASU:5869
Ensembl:ENST00000360299 Ensembl:ENST00000448789
Ensembl:ENST00000553116 GeneID:5869 KEGG:hsa:5869 UCSC:uc001siv.3
GeneCards:GC12P056368 HGNC:HGNC:9784 HPA:CAB010224 MIM:179514
neXtProt:NX_P61020 PharmGKB:PA34144 InParanoid:P61020 OMA:GTQGKIC
PhylomeDB:P61020 ChiTaRS:RAB5B EvolutionaryTrace:P61020
GenomeRNAi:5869 NextBio:22794 ArrayExpress:P61020 Bgee:P61020
CleanEx:HS_RAB5B Genevestigator:P61020 Uniprot:P61020
Length = 215
Score = 315 (115.9 bits), Expect = 3.1e-28, P = 3.1e-28
Identities = 66/175 (37%), Positives = 110/175 (62%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + +DD V +IWDTAGQER
Sbjct: 22 KLVLLGESAVGKSSLVLRFVKGQFHEYQESTIGAAFLTQSVCLDDTTVKFEIWDTAGQER 81
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
+ SL +YRGA ++VYD+ Q+TF + W +E +QA P + L GNK D
Sbjct: 82 YHSLAPMYYRGAQAAIVVYDITNQETFARAKTWVKELQRQASP----SIVIALAGNKADL 137
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
+ R+V ++A + A ++ + ETSAK N+++ FL +A+ K+E +++
Sbjct: 138 --ANKRMVEYEEAQAY-ADDNSLLFMETSAKTAMNVNDLFLAIAKKLPKSEPQNL 189
WARNING: HSPs involving 1647 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.319 0.135 0.407 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 210 210 0.00080 112 3 11 22 0.37 33
31 0.48 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 1897
No. of states in DFA: 607 (65 KB)
Total size of DFA: 188 KB (2108 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 17.62u 0.13s 17.75t Elapsed: 00:00:00
Total cpu time: 17.65u 0.13s 17.78t Elapsed: 00:00:00
Start: Fri May 10 13:18:47 2013 End: Fri May 10 13:18:47 2013
WARNINGS ISSUED: 2