BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028305
(210 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|255582823|ref|XP_002532185.1| protein with unknown function [Ricinus communis]
gi|223528133|gb|EEF30203.1| protein with unknown function [Ricinus communis]
Length = 209
Score = 342 bits (878), Expect = 4e-92, Method: Compositional matrix adjust.
Identities = 169/211 (80%), Positives = 186/211 (88%), Gaps = 3/211 (1%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MD+S N KRR LLKVIVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKELQ+++K+
Sbjct: 1 MDMSNNYKRRALLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQLEEKV 60
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQK+FE+L NW EEF+KQADP +
Sbjct: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKSFETLNNWHEEFIKQADPIYPD 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PF+LLGNKID DGG+SRVV +KKA EWCA G IPYFETSAKED +DEAFLCVA+ A
Sbjct: 121 AFPFILLGNKIDIDGGNSRVVSEKKAREWCASNGGIPYFETSAKEDYGVDEAFLCVAKTA 180
Query: 181 LKNE-HKDIYYQPQGISETVSEVEQRGGCAC 210
L +E DIY+ QGISE+VSEVEQRGGCAC
Sbjct: 181 LDSEPEHDIYF--QGISESVSEVEQRGGCAC 209
>gi|225438533|ref|XP_002279477.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|296082518|emb|CBI21523.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 335 bits (859), Expect = 7e-90, Method: Compositional matrix adjust.
Identities = 161/203 (79%), Positives = 179/203 (88%), Gaps = 3/203 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKVIVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKELQ+DDKLVTLQ+WDT
Sbjct: 5 RRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQLWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGADCCVLVYDVNV K+FESLQ+W EEFLKQADP E E PFV+LG
Sbjct: 65 AGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEVFPFVVLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-KD 187
NK+D DGG+SRVV +++A EWCA RG+IPYFETSAKED N+D AFLCVA + L NEH ++
Sbjct: 125 NKVDVDGGNSRVVSERRAREWCASRGDIPYFETSAKEDFNVDAAFLCVARVGLSNEHGQE 184
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y+ + ISE VSE EQ+GGCAC
Sbjct: 185 NYF--RAISEVVSETEQKGGCAC 205
>gi|356512758|ref|XP_003525083.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
Length = 207
Score = 332 bits (852), Expect = 5e-89, Method: Compositional matrix adjust.
Identities = 161/211 (76%), Positives = 184/211 (87%), Gaps = 5/211 (2%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MDIS ++R LLK+IVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKE+Q+DDKL
Sbjct: 1 MDIS--QRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKL 58
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQIWDTAGQERF S+G+AFYRGADCCVLVYDVN+ KTF++L NW +EFLKQ D + E
Sbjct: 59 VTLQIWDTAGQERFHSIGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPE 118
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PFVLLGNK+D DGG+SR V +KKA +WCA RGNIPYFETSAKE N++EAFLCVA+IA
Sbjct: 119 AFPFVLLGNKVDVDGGNSRRVTEKKARDWCASRGNIPYFETSAKEGYNVEEAFLCVAKIA 178
Query: 181 LKNEH-KDIYYQPQGISETVSEVEQRGGCAC 210
L+NEH +DIY+ +GISE VSE EQR GCAC
Sbjct: 179 LENEHDQDIYF--RGISEAVSEAEQRSGCAC 207
>gi|255572331|ref|XP_002527104.1| protein with unknown function [Ricinus communis]
gi|223533527|gb|EEF35267.1| protein with unknown function [Ricinus communis]
Length = 205
Score = 331 bits (849), Expect = 9e-89, Method: Compositional matrix adjust.
Identities = 159/207 (76%), Positives = 182/207 (87%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSVRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDALDNWHEEFLKQANPPDPKTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA EWCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKEWCASKGNIPYFETSAKEDYNVDPAFLCIAKTALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+ QGI E VSE EQRGGCAC
Sbjct: 181 REQDIYF--QGIPEAVSESEQRGGCAC 205
>gi|225463105|ref|XP_002264356.1| PREDICTED: ras-related protein Rab7 isoform 1 [Vitis vinifera]
gi|297739360|emb|CBI29350.3| unnamed protein product [Vitis vinifera]
Length = 205
Score = 331 bits (848), Expect = 1e-88, Method: Compositional matrix adjust.
Identities = 158/207 (76%), Positives = 181/207 (87%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
H +DIY+ QGI E VSE EQ GGCAC
Sbjct: 181 HEQDIYF--QGIPEAVSETEQGGGCAC 205
>gi|224062828|ref|XP_002300895.1| predicted protein [Populus trichocarpa]
gi|118486942|gb|ABK95304.1| unknown [Populus trichocarpa]
gi|222842621|gb|EEE80168.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 330 bits (847), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/207 (76%), Positives = 179/207 (86%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L NW EEFLKQA P + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQATPSDPRTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFL +A+IAL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDPAFLSIAKIALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
H +DIY+ QGI E SE EQRGGCAC
Sbjct: 181 HEQDIYF--QGIPEAASESEQRGGCAC 205
>gi|449444034|ref|XP_004139780.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449502892|ref|XP_004161772.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 205
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 158/207 (76%), Positives = 180/207 (86%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSFRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW +EFL+QA+P + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHDEFLRQANPPDPRTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA EWCA + NIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAREWCASKENIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
H +DIY+ QGI ETV E EQRGGCAC
Sbjct: 181 HEQDIYF--QGIPETVVETEQRGGCAC 205
>gi|357519661|ref|XP_003630119.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355524141|gb|AET04595.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 330 bits (846), Expect = 2e-88, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 182/211 (86%), Gaps = 3/211 (1%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MDIS + ++R LLKVIVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKEL +DDKL
Sbjct: 1 MDISSSHRKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKL 60
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQIWDTAGQERF SLG+AFYRGADCCVLVYDVN+ KTF++L NW ++FLKQAD G +
Sbjct: 61 VTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPD 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PFVLLGNK+D DGG+SR V +KKA EWCA RG+IPYFETSAKE N+D+AFLCVA++A
Sbjct: 121 AFPFVLLGNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVA 180
Query: 181 LKNEHK-DIYYQPQGISETVSEVEQRGGCAC 210
+N+H DIY+ +GISET SE EQR CAC
Sbjct: 181 SENDHDLDIYF--RGISETPSEAEQRSNCAC 209
>gi|356576109|ref|XP_003556176.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|3914559|sp|Q43463.1|RAB7_SOYBN RecName: Full=Ras-related protein Rab7
gi|414834|gb|AAA34004.1| Rab7p [Glycine max]
Length = 206
Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 159/208 (76%), Positives = 182/208 (87%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NW EEFLKQA+P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>gi|388497440|gb|AFK36786.1| unknown [Medicago truncatula]
Length = 209
Score = 327 bits (839), Expect = 1e-87, Method: Compositional matrix adjust.
Identities = 158/211 (74%), Positives = 181/211 (85%), Gaps = 3/211 (1%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MDIS + ++R LLKVIVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKEL +DDKL
Sbjct: 1 MDISSSHRKRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELLVDDKL 60
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQIWDTAGQERF SLG+AFYRGADCCVLVYDVN+ KTF++L NW ++FLKQAD G +
Sbjct: 61 VTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDDFLKQADTGNPD 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PFVLLGNK+D DGG+SR V +KKA EWCA RG+IPYFETSAKE N+D+AFLCVA++A
Sbjct: 121 AFPFVLLGNKVDVDGGNSRRVTEKKAREWCASRGSIPYFETSAKEGYNVDDAFLCVAKVA 180
Query: 181 LKNEHK-DIYYQPQGISETVSEVEQRGGCAC 210
+N+H DIY+ +GI ET SE EQR CAC
Sbjct: 181 SENDHDLDIYF--RGIFETPSEAEQRSNCAC 209
>gi|351727491|ref|NP_001235371.1| uncharacterized protein LOC100499740 [Glycine max]
gi|255626217|gb|ACU13453.1| unknown [Glycine max]
Length = 206
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 182/208 (87%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NW EEFLKQA+P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QG+ E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGVPEAAVPENEQRSGCAC 206
>gi|255647251|gb|ACU24093.1| unknown [Glycine max]
Length = 206
Score = 327 bits (838), Expect = 2e-87, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 182/208 (87%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NW EEFLKQA+P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNK+D DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>gi|1370182|emb|CAA98168.1| RAB7A [Lotus japonicus]
Length = 205
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 155/207 (74%), Positives = 178/207 (85%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSDPRTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDYNVDAAFLCIAKTALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
H +DIY+ Q I E E EQ+GGC C
Sbjct: 181 HDQDIYF--QAIPEAAPENEQKGGCQC 205
>gi|363807114|ref|NP_001242593.1| uncharacterized protein LOC100787120 [Glycine max]
gi|255645135|gb|ACU23066.1| unknown [Glycine max]
gi|255645145|gb|ACU23071.1| unknown [Glycine max]
Length = 207
Score = 326 bits (835), Expect = 4e-87, Method: Compositional matrix adjust.
Identities = 159/211 (75%), Positives = 181/211 (85%), Gaps = 5/211 (2%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MDIS ++R LLK+IVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKE+Q+DDKL
Sbjct: 1 MDIS--QRKRTLLKIIVLGDSGVGKTSLMNQYVYRKFSQQYKATIGADFVTKEIQVDDKL 58
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQIWDTAGQERF SLG+AFYRGADCCVLVYDVN+ KTF++L NW +EFLKQ D + E
Sbjct: 59 VTLQIWDTAGQERFHSLGAAFYRGADCCVLVYDVNIHKTFDTLNNWHDEFLKQGDMNDPE 118
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PFVLLGNK+D DGG+SR V +KKA +WC GNIPYFETSAKE N++EAF CVA+IA
Sbjct: 119 AFPFVLLGNKVDVDGGNSRRVTEKKARDWCTSGGNIPYFETSAKEGYNVEEAFSCVAKIA 178
Query: 181 LKNEH-KDIYYQPQGISETVSEVEQRGGCAC 210
L+NEH +DIY+ +GISE VSE EQR GCAC
Sbjct: 179 LENEHDQDIYF--RGISEAVSEAEQRSGCAC 207
>gi|224081256|ref|XP_002306355.1| predicted protein [Populus trichocarpa]
gi|222855804|gb|EEE93351.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 325 bits (833), Expect = 6e-87, Method: Compositional matrix adjust.
Identities = 165/218 (75%), Positives = 183/218 (83%), Gaps = 14/218 (6%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQY--VYNKFSQQYKATIGADFVTKELQMDDKLVT 62
++M RR LLKVIVLGD GVGKTSLMNQY VY KFSQQYK+TIGADFVTKELQ+DDKLVT
Sbjct: 1 MDMSRRALLKVIVLGDIGVGKTSLMNQYPYVYKKFSQQYKSTIGADFVTKELQIDDKLVT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ-ADPGEHEA 121
LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVN+QK+FE+L NW EEF+KQ ADP + A
Sbjct: 61 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNIQKSFETLNNWHEEFVKQAADPADPGA 120
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
PF+L GNKID DGGSSRVV +KKA EWCA RG+IPYFETSAKE N+ EAFLCVA++AL
Sbjct: 121 FPFILFGNKIDVDGGSSRVVSEKKAREWCASRGDIPYFETSAKEGYNVHEAFLCVAKMAL 180
Query: 182 KN---------EHKDIYYQPQGISETVSEVEQRGGCAC 210
+ + DIY+ QGISETVSEVEQRGGCAC
Sbjct: 181 EGEHEHEQEHEQEHDIYF--QGISETVSEVEQRGGCAC 216
>gi|408797124|gb|AFU92144.1| small GTP binding protein [Arachis hypogaea]
Length = 205
Score = 325 bits (832), Expect = 8e-87, Method: Compositional matrix adjust.
Identities = 155/207 (74%), Positives = 179/207 (86%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++M+RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F+SL+NW EEFLKQA+P + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDSLENWHEEFLKQANPSDPRMFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LGNKID DGG+SRVV +KKA +WC +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 TVLGNKIDIDGGNSRVVSEKKAKDWCTSKGNIPYFETSAKEDYNVDAAFLCIAKTALSNE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+ +DIY+ Q + ETV + EQ GGCAC
Sbjct: 181 YDQDIYF--QAMPETVPDNEQSGGCAC 205
>gi|255634504|gb|ACU17616.1| unknown [Glycine max]
Length = 206
Score = 325 bits (832), Expect = 1e-86, Method: Compositional matrix adjust.
Identities = 158/208 (75%), Positives = 181/208 (87%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGAD VTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADSVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NW EEFLKQA+P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>gi|3914558|sp|Q41640.1|RAB7_VIGAC RecName: Full=Ras-related protein Rab7
gi|414842|gb|AAA34242.1| Rab7p [Vigna aconitifolia]
Length = 206
Score = 323 bits (829), Expect = 2e-86, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 180/208 (86%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGD+GVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVL YDVNV K+F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>gi|359495179|ref|XP_003634933.1| PREDICTED: ras-related protein Rab7 isoform 2 [Vitis vinifera]
Length = 216
Score = 322 bits (826), Expect = 5e-86, Method: Compositional matrix adjust.
Identities = 158/218 (72%), Positives = 181/218 (83%), Gaps = 14/218 (6%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ----------- 113
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L NW EEFLKQ
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDTLDNWHEEFLKQVHDAFFIPLFL 120
Query: 114 ADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
A+P + + PF+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AF
Sbjct: 121 ANPSDPKTFPFILLGNKIDIDGGNSRVVSKKKAEDWCASKGNIPYFETSAKEDYNVDAAF 180
Query: 174 LCVAEIALKNEH-KDIYYQPQGISETVSEVEQRGGCAC 210
LC+A+ AL NEH +DIY+ QGI E VSE EQ GGCAC
Sbjct: 181 LCIAKTALANEHEQDIYF--QGIPEAVSETEQGGGCAC 216
>gi|358344496|ref|XP_003636325.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502260|gb|AES83463.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 155/206 (75%), Positives = 175/206 (84%), Gaps = 4/206 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQIW
Sbjct: 3 LRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P PF+L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFIL 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH- 185
LGNK+D DGG+SRVV KKA +WCA +GN+PYFETSAKED N+D AFL +A+ AL NE
Sbjct: 123 LGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTALANERE 182
Query: 186 KDIYYQPQGISE-TVSEVEQRGGCAC 210
+DIY+QP I E V E EQRGGCAC
Sbjct: 183 QDIYFQP--IPEPVVPENEQRGGCAC 206
>gi|224085264|ref|XP_002307527.1| predicted protein [Populus trichocarpa]
gi|118487254|gb|ABK95455.1| unknown [Populus trichocarpa]
gi|222856976|gb|EEE94523.1| predicted protein [Populus trichocarpa]
Length = 205
Score = 320 bits (819), Expect = 3e-85, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 178/207 (85%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSG GKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSARRRTLLKVIVLGDSGAGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCC LVYDVNV ++F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCALVYDVNVMRSFDTLDNWHEEFLKQANPSDPKTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNI YFETSAKED N+D AFL +A+ AL +E
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNILYFETSAKEDYNVDPAFLSIAKTALAHE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
H +DIY+ QGI E V+E EQRGGCAC
Sbjct: 181 HGQDIYF--QGIPEDVTENEQRGGCAC 205
>gi|326512418|dbj|BAJ99564.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 317 bits (813), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 149/204 (73%), Positives = 177/204 (86%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+NKFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV +KKA+EWC+ +GNIPY+ETSAKED N+DEAFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYYETSAKEDYNVDEAFLSVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+Q +++ V E EQRGGCAC
Sbjct: 185 DIYFQT--VADPVPETEQRGGCAC 206
>gi|297845296|ref|XP_002890529.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297336371|gb|EFH66788.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 205
Score = 317 bits (812), Expect = 2e-84, Method: Compositional matrix adjust.
Identities = 153/207 (73%), Positives = 178/207 (85%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVI+LGDSGVGKTSLMNQYV NKFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSIRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+F+SL NW EFLK+A P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNYLKSFDSLDNWHAEFLKRASPRDPMAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNK+D DGG+SRVV +KKA EWCA +GNI YFETSAKE+ N+D++FLC+ ++AL NE
Sbjct: 121 ILLGNKVDVDGGNSRVVSEKKAREWCAEKGNIVYFETSAKENYNVDDSFLCITKLALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+ Q I ET SE EQRGGCAC
Sbjct: 181 RDQDIYF--QAIPETGSESEQRGGCAC 205
>gi|623592|gb|AAA74120.1| putative [Nicotiana tabacum]
Length = 204
Score = 316 bits (810), Expect = 3e-84, Method: Compositional matrix adjust.
Identities = 154/207 (74%), Positives = 177/207 (85%), Gaps = 4/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++M+RR LLKVIVLGDSGVGKTSLMN+YV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSMRRRTLLKVIVLGDSGVGKTSLMNRYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMRSFDNLDNWHEEFLKQANPPDPKTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA EWC+ +G IPYFETSAKED N+D AFL + L NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKEWCSSKG-IPYFETSAKEDINVDAAFLFYCKTRLANE 179
Query: 185 HK-DIYYQPQGISETVSEVEQRGGCAC 210
H+ DIY+ QGI E VSE EQR GCAC
Sbjct: 180 HRQDIYF--QGIPEAVSETEQRSGCAC 204
>gi|147819924|emb|CAN62813.1| hypothetical protein VITISV_031882 [Vitis vinifera]
Length = 205
Score = 315 bits (808), Expect = 6e-84, Method: Compositional matrix adjust.
Identities = 147/178 (82%), Positives = 162/178 (91%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKVIVLGDSGVGKTSLMNQYVY KFSQQYKATIGADFVTKELQ+DDKLVTLQ+WDT
Sbjct: 5 RRTLLKVIVLGDSGVGKTSLMNQYVYKKFSQQYKATIGADFVTKELQIDDKLVTLQLWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGADCCVLVYDVNV K+FESLQ+W EEFLKQADP E E PFV+LG
Sbjct: 65 AGQERFQSLGSAFYRGADCCVLVYDVNVLKSFESLQSWHEEFLKQADPAEPEXFPFVVLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
NK+D DGG+SRVV +++A EWCA RG+IPYFETSAKED N+D AFLCVA++ L NEH+
Sbjct: 125 NKVDVDGGNSRVVSERRAREWCASRGDIPYFETSAKEDFNVDAAFLCVAQVGLSNEHE 182
>gi|357136165|ref|XP_003569676.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 206
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 177/204 (86%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+NKFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV ++F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVNRSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV +KKA+EWC+ +GNIPY+ETSAKED N+D+AFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSEKKAIEWCSSKGNIPYYETSAKEDYNVDDAFLSVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+Q +++ V E EQRGGCAC
Sbjct: 185 DIYFQT--VADPVPETEQRGGCAC 206
>gi|388511052|gb|AFK43592.1| unknown [Lotus japonicus]
Length = 205
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 175/207 (84%), Gaps = 3/207 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ +FSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG +FYRGADCCVLVYDVNV ++F++L W EEFLKQA+P + PF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WC +GNIPYFETSAKED N+D AFL +A+ AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKANDWCVSKGNIPYFETSAKEDYNVDAAFLSIAKTALATD 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+ Q I E V+E EQRGGCAC
Sbjct: 181 REQDIYF--QNIPEAVAESEQRGGCAC 205
>gi|358344494|ref|XP_003636324.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502259|gb|AES83462.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 314 bits (805), Expect = 1e-83, Method: Compositional matrix adjust.
Identities = 155/209 (74%), Positives = 175/209 (83%), Gaps = 7/209 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQY---VYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
++RR LLKVIVLGDSGVGKTSLMNQY V+ KFSQQYKATIGADFVTKELQ+DD+LVTL
Sbjct: 3 LRRRTLLKVIVLGDSGVGKTSLMNQYPLYVHKKFSQQYKATIGADFVTKELQIDDRLVTL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P P
Sbjct: 63 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFP 122
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
F+LLGNK+D DGG+SRVV KKA +WCA +GN+PYFETSAKED N+D AFL +A+ AL N
Sbjct: 123 FILLGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTALAN 182
Query: 184 EH-KDIYYQPQGISE-TVSEVEQRGGCAC 210
E +DIY+QP I E V E EQRGGCAC
Sbjct: 183 EREQDIYFQP--IPEPVVPENEQRGGCAC 209
>gi|379134821|gb|AFC93432.1| Ras-like protein [Triticum aestivum]
Length = 206
Score = 314 bits (804), Expect = 2e-83, Method: Compositional matrix adjust.
Identities = 147/204 (72%), Positives = 176/204 (86%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+NKFSQQYKATIGADFV KE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHNKFSQQYKATIGADFVAKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVNKSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV +KKA++WC+ +GNIPY+ETSAKED N+DEAFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSEKKAMDWCSSKGNIPYYETSAKEDYNVDEAFLSVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+Q +++ V E EQRGGCAC
Sbjct: 185 DIYFQT--VADPVPETEQRGGCAC 206
>gi|15219943|ref|NP_173688.1| Ras-related protein Rab7 [Arabidopsis thaliana]
gi|3914521|sp|O04157.1|RAG3B_ARATH RecName: Full=Ras-related protein RABG3b; Short=AtRABG3b; AltName:
Full=Ras-related protein Rab75; Short=AtRab75
gi|2065015|emb|CAA70951.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|2505866|emb|CAA72904.1| GTP-binding protein Rab7 [Arabidopsis thaliana]
gi|3287684|gb|AAC25512.1| Strong similaity to gb|Y09821 GTP-binding protein Rab7 from A.
thaliana. EST gb|T76449 comes from this gene
[Arabidopsis thaliana]
gi|15718416|dbj|BAB68375.1| AtRab75 [Arabidopsis thaliana]
gi|88193796|gb|ABD42987.1| At1g22740 [Arabidopsis thaliana]
gi|332192158|gb|AEE30279.1| Ras-related protein Rab7 [Arabidopsis thaliana]
Length = 203
Score = 313 bits (802), Expect = 3e-83, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 175/207 (84%), Gaps = 5/207 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQYV NKFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FESL NW EFL +A P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNK+D DGG+SRVV +KKA EWCA +GNI YFETSAKED N+D++FLC+ ++AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+QP +T S EQRGGCAC
Sbjct: 181 RDQDIYFQP----DTGSVPEQRGGCAC 203
>gi|388492594|gb|AFK34363.1| unknown [Medicago truncatula]
Length = 206
Score = 312 bits (799), Expect = 6e-83, Method: Compositional matrix adjust.
Identities = 154/206 (74%), Positives = 173/206 (83%), Gaps = 4/206 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQIW
Sbjct: 3 LRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P PF+L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPFNPSTFPFIL 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH- 185
LGNK+D DGG+SRVV KKA EWCA +GN+PYFET AKED N+D AFL +A+ AL NE
Sbjct: 123 LGNKVDIDGGNSRVVFDKKAKEWCASKGNVPYFETFAKEDLNVDAAFLRIAKTALANERE 182
Query: 186 KDIYYQPQGISE-TVSEVEQRGGCAC 210
+DIY+QP I E V E EQRGG AC
Sbjct: 183 QDIYFQP--IPEPVVPENEQRGGWAC 206
>gi|297809149|ref|XP_002872458.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
gi|297318295|gb|EFH48717.1| AtRABG3a [Arabidopsis lyrata subsp. lyrata]
Length = 206
Score = 311 bits (796), Expect = 1e-82, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 175/205 (85%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P + + PF++L
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNK+D DGGSSRVV +KKA +WCA GNIPYFETSAKED N+DEAFL +A+ AL NEH +
Sbjct: 124 GNKVDVDGGSSRVVSEKKAADWCASNGNIPYFETSAKEDFNVDEAFLTIAKTALANEHEQ 183
Query: 187 DIYYQPQGISETVSEVEQR-GGCAC 210
DIY+ QGI + V+E E + GGCAC
Sbjct: 184 DIYF--QGIPDGVTENEPKGGGCAC 206
>gi|15234026|ref|NP_192710.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|75164695|sp|Q948K8.1|RAG3A_ARATH RecName: Full=Ras-related protein RABG3a; Short=AtRABG3a; AltName:
Full=Ras-related protein Rab76; Short=AtRab76
gi|15718418|dbj|BAB68376.1| AtRab76 [Arabidopsis thaliana]
gi|110738224|dbj|BAF01041.1| AtRab76 [Arabidopsis thaliana]
gi|119360063|gb|ABL66760.1| At4g09720 [Arabidopsis thaliana]
gi|332657383|gb|AEE82783.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 206
Score = 310 bits (795), Expect = 2e-82, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P + + PF++L
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +A+ AL NEH +
Sbjct: 124 GNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQ 183
Query: 187 DIYYQPQGISETVSEVEQR-GGCAC 210
DIY+ QGI + V+E E + GGCAC
Sbjct: 184 DIYF--QGIPDAVTENEPKGGGCAC 206
>gi|242058511|ref|XP_002458401.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
gi|241930376|gb|EES03521.1| hypothetical protein SORBIDRAFT_03g032810 [Sorghum bicolor]
Length = 206
Score = 310 bits (793), Expect = 3e-82, Method: Compositional matrix adjust.
Identities = 146/204 (71%), Positives = 172/204 (84%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN ++F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV KKA+EWCA +GNIPYFETSAKED N+D AFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSDKKAMEWCASKGNIPYFETSAKEDYNVDNAFLTVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+ Q +++ V E EQR GCAC
Sbjct: 185 DIYF--QSVTDPVPETEQRSGCAC 206
>gi|115439561|ref|NP_001044060.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|57899823|dbj|BAD87568.1| putative rab7 protein [Oryza sativa Japonica Group]
gi|113533591|dbj|BAF05974.1| Os01g0714900 [Oryza sativa Japonica Group]
gi|215767050|dbj|BAG99278.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 207
Score = 308 bits (788), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 172/204 (84%), Gaps = 2/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN ++F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV +KKA+EWC+ +GNIPYFETSAKED N+D AFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKEDRNVDSAFLSVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+Q + + V E EQR GCAC
Sbjct: 185 DIYFQTV-VPDPVPEAEQRSGCAC 207
>gi|223973683|gb|ACN31029.1| unknown [Zea mays]
Length = 206
Score = 307 bits (787), Expect = 1e-81, Method: Compositional matrix adjust.
Identities = 145/204 (71%), Positives = 171/204 (83%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG A YRGADCCVLVYDVN ++F++L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVALYRGADCCVLVYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGG SRVV KKA+EWCA +GNIPYFETSAKED N+D AFL VA++AL++E +
Sbjct: 125 GNKIDVDGGKSRVVSDKKAMEWCASKGNIPYFETSAKEDYNVDNAFLTVAKLALEHERDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+ Q +++ V E EQR GCAC
Sbjct: 185 DIYF--QSVADPVPETEQRSGCAC 206
>gi|1370184|emb|CAA98169.1| RAB7B [Lotus japonicus]
Length = 205
Score = 306 bits (783), Expect = 5e-81, Method: Compositional matrix adjust.
Identities = 147/206 (71%), Positives = 172/206 (83%), Gaps = 3/206 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVIVLGDSGVGKTSLMNQYV+ +FSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIVLGDSGVGKTSLMNQYVHKRFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG +FYRGADCCVLVYDVNV ++F++L W EEFLKQA+P + PF
Sbjct: 61 IWDTAGQERFQSLGVSFYRGADCCVLVYDVNVMRSFDTLDTWHEEFLKQANPPDTRTFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WC +GNIPYFETSAKED D AFL +A+ AL +
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKANDWCVSKGNIPYFETSAKEDYIGDAAFLSIAKTALATD 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCA 209
+DIY+ Q I E V+E EQRGGCA
Sbjct: 181 REQDIYF--QNIPEAVAESEQRGGCA 204
>gi|413946251|gb|AFW78900.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 206
Score = 304 bits (779), Expect = 1e-80, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 172/204 (84%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV KFSQQYKATIGADF+TKE+ + D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV+++F +L W +EFL QA P + + PF+L+
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAGPSDPQRFPFILV 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGGS R+VP+KKA EWCA +G+IPYFETSAKED N+D AFLC+A +AL++EH +
Sbjct: 125 GNKIDLDGGSKRMVPEKKAREWCASKGDIPYFETSAKEDHNVDTAFLCIARLALEHEHDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY++ ++E V + EQ GCAC
Sbjct: 185 DIYFKT--VAEQVPDTEQTSGCAC 206
>gi|4538902|emb|CAB39639.1| rab7-like protein [Arabidopsis thaliana]
gi|7267667|emb|CAB78095.1| rab7-like protein [Arabidopsis thaliana]
Length = 208
Score = 304 bits (778), Expect = 2e-80, Method: Compositional matrix adjust.
Identities = 149/207 (71%), Positives = 174/207 (84%), Gaps = 6/207 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMN--QYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
+RR LLKVIVLGDSGVGKTSLMN +YV+ KFS QYKATIGADFVTKELQ+ +KLVTLQI
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNHFRYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQI 63
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P + + PF+
Sbjct: 64 WDTAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFI 123
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+LGNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +A+ AL NEH
Sbjct: 124 VLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEH 183
Query: 186 -KDIYYQPQGISETVSEVEQR-GGCAC 210
+DIY+ QGI + V+E E + GGCAC
Sbjct: 184 EQDIYF--QGIPDAVTENEPKGGGCAC 208
>gi|18399819|ref|NP_565521.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|75206208|sp|Q9SJ11.2|RABG2_ARATH RecName: Full=Ras-related protein RABG2; Short=AtRABG2; AltName:
Full=Ras-related protein Rab77; Short=AtRab77; AltName:
Full=Ras-related protein Rab7a; Short=AtRab7a
gi|15718420|dbj|BAB68377.1| AtRab77 [Arabidopsis thaliana]
gi|20198008|gb|AAD20423.2| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|21537180|gb|AAM61521.1| putative RAS superfamily GTP-binding protein [Arabidopsis thaliana]
gi|88193804|gb|ABD42991.1| At2g21880 [Arabidopsis thaliana]
gi|110738854|dbj|BAF01350.1| GTP-binding protein AtRab77 [Arabidopsis thaliana]
gi|330252139|gb|AEC07233.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 212
Score = 303 bits (776), Expect = 3e-80, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 173/212 (81%), Gaps = 9/212 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
++K R LLKVIVLGDSGVGKTSLMNQYVY KF++QYKATIGADFVTKEL +D+K VTLQI
Sbjct: 3 SLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG+AFYRGADCCVLVYDVN K+FE+L NW EFLKQA+P E E PFV
Sbjct: 63 WDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFV 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
L+GNK D DGG+SRVV K+A+EWC +GNIPY ETSAKED NIDEAFL VA IAL NE
Sbjct: 123 LIGNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNER 182
Query: 186 K---DIYYQPQG-ISETVSEV---EQRGGCAC 210
K DIY P+G ++V+++ +Q GCAC
Sbjct: 183 KQSNDIY--PRGQYHDSVTDIIDPDQSRGCAC 212
>gi|217071676|gb|ACJ84198.1| unknown [Medicago truncatula]
Length = 221
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/179 (77%), Positives = 157/179 (87%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQIW
Sbjct: 3 LRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P PF+L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFIL 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
LGNK+D DGG+SRVV KKA +WCA +GN+PYFETSAKED N+D AFL +A+ AL NEH
Sbjct: 123 LGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTALANEH 181
>gi|358344498|ref|XP_003636326.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502261|gb|AES83464.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 221
Score = 302 bits (773), Expect = 7e-80, Method: Compositional matrix adjust.
Identities = 139/179 (77%), Positives = 157/179 (87%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQIW
Sbjct: 3 LRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NW EEFLKQA+P PF+L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLDNWHEEFLKQANPSNPSTFPFIL 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
LGNK+D DGG+SRVV KKA +WCA +GN+PYFETSAKED N+D AFL +A+ AL NEH
Sbjct: 123 LGNKVDIDGGNSRVVSDKKAKDWCASKGNVPYFETSAKEDLNVDAAFLRIAKTALANEH 181
>gi|238480271|ref|NP_001154217.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657385|gb|AEE82785.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 217
Score = 301 bits (772), Expect = 8e-80, Method: Compositional matrix adjust.
Identities = 150/216 (69%), Positives = 174/216 (80%), Gaps = 15/216 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ-----------ADP 116
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQ A P
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMWTIAEASP 123
Query: 117 GEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+ + PF++LGNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +
Sbjct: 124 SDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTI 183
Query: 177 AEIALKNEH-KDIYYQPQGISETVSEVEQR-GGCAC 210
A+ AL NEH +DIY+ QGI + V+E E + GGCAC
Sbjct: 184 AKTALANEHEQDIYF--QGIPDAVTENEPKGGGCAC 217
>gi|334186419|ref|NP_001190694.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|332657386|gb|AEE82786.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 211
Score = 301 bits (772), Expect = 9e-80, Method: Compositional matrix adjust.
Identities = 150/210 (71%), Positives = 174/210 (82%), Gaps = 9/210 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA-----DPGEHEAC 122
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P + +
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQAWNIGMCPSDPKTF 123
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
PF++LGNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +A+ AL
Sbjct: 124 PFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALA 183
Query: 183 NEH-KDIYYQPQGISETVSEVEQR-GGCAC 210
NEH +DIY+ QGI + V+E E + GGCAC
Sbjct: 184 NEHEQDIYF--QGIPDAVTENEPKGGGCAC 211
>gi|449461445|ref|XP_004148452.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449503042|ref|XP_004161814.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
Length = 209
Score = 301 bits (770), Expect = 1e-79, Method: Compositional matrix adjust.
Identities = 146/212 (68%), Positives = 176/212 (83%), Gaps = 5/212 (2%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
MD+S +R LLKVI LGDSGVGKTSLMN+YVY KF+ QYKATIGADF+TKEL++DD+L
Sbjct: 1 MDVSAT--KRRLLKVIFLGDSGVGKTSLMNRYVYKKFNLQYKATIGADFMTKELRIDDQL 58
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VTLQ+WDTAGQERFQSLG+AFYRGADCCV VYDVNV K+FESL +W EEFLKQA+P + +
Sbjct: 59 VTLQVWDTAGQERFQSLGAAFYRGADCCVFVYDVNVTKSFESLSSWHEEFLKQAEPADPK 118
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
A PF+LLGNKID D G SR V +K+A +WC RG++PYFETSAK+D N++EAF+C+A+ A
Sbjct: 119 AFPFLLLGNKIDVDDGHSRAVSEKRARQWCDSRGSMPYFETSAKQDYNVNEAFICIAKAA 178
Query: 181 LKNEHKDIYYQPQGISETVSEVEQR--GGCAC 210
L NE + Y + ISE+VSEVE R GGCAC
Sbjct: 179 LTNEEEQEPY-FESISESVSEVETRGGGGCAC 209
>gi|357132794|ref|XP_003568013.1| PREDICTED: ras-related protein Rab7-like [Brachypodium distachyon]
Length = 207
Score = 299 bits (766), Expect = 4e-79, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 174/206 (84%), Gaps = 2/206 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
+++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADF+TKE+ ++D+LVTLQI
Sbjct: 3 SLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFLTKEVLIEDRLVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVLVYDVN +++F +L W +EF+ QA P + + PF+
Sbjct: 63 WDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLGTWHDEFINQAGPSDPKHFPFI 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
L+GNK+D D GS RVVP+KKA +WCA +GNIPYFETSAK+D N+D+AFLC+A++AL++EH
Sbjct: 123 LVGNKVDQDAGSRRVVPEKKAKDWCASKGNIPYFETSAKDDHNVDDAFLCIAKLALEHEH 182
Query: 186 -KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY++ S +E EQ GCAC
Sbjct: 183 DQDIYFKTVAESAPKTE-EQPAGCAC 207
>gi|297825041|ref|XP_002880403.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
gi|297326242|gb|EFH56662.1| hypothetical protein ARALYDRAFT_481052 [Arabidopsis lyrata subsp.
lyrata]
Length = 211
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 147/209 (70%), Positives = 171/209 (81%), Gaps = 8/209 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K R LLKVIVLGDSGVGKTSLMNQYVY KF++QYKATIGADFVTKEL +D+K VTLQIWD
Sbjct: 5 KNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKPVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG+AFYRGADCCVLVYDVN K+FE+L NW EFLKQA+P E + PFVL+
Sbjct: 65 TAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPDTFPFVLI 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNK D DGG+SRVV K+A+EWC +GNI Y ETSAK+D N+DEAFL VA IAL NE K
Sbjct: 125 GNKTDVDGGNSRVVSNKRAIEWCGSKGNILYHETSAKDDTNVDEAFLGVAHIALANERKQ 184
Query: 187 --DIYYQPQGISETVSEV---EQRGGCAC 210
DIY P+G+ ++V+++ +Q GCAC
Sbjct: 185 TNDIY--PRGVYDSVTDIIDPDQTRGCAC 211
>gi|224093888|ref|XP_002310036.1| predicted protein [Populus trichocarpa]
gi|222852939|gb|EEE90486.1| predicted protein [Populus trichocarpa]
Length = 194
Score = 298 bits (764), Expect = 6e-79, Method: Compositional matrix adjust.
Identities = 155/202 (76%), Positives = 168/202 (83%), Gaps = 8/202 (3%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKVIVLGDSGVGKTSLMNQYVYNK+SQQ KATIGADFVTKELQ+DDKLVTLQIW+T
Sbjct: 1 RRALLKVIVLGDSGVGKTSLMNQYVYNKYSQQSKATIGADFVTKELQIDDKLVTLQIWNT 60
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVL YDVNVQK+FE+L NW EEFLKQ D + A PF+LLG
Sbjct: 61 AGQERFQSLGPAFYRGADCCVLEYDVNVQKSFETLNNWHEEFLKQTDFNDPHAFPFILLG 120
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NKID DG +KKA EWCA G IP FETSAKEDCNIDEAFLC A+ AL+ EH+
Sbjct: 121 NKIDLDG-------EKKAREWCASMGGIPCFETSAKEDCNIDEAFLCDAKTALEEEHE-H 172
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
+ +GISETVSE EQRGGCAC
Sbjct: 173 EHDMEGISETVSEAEQRGGCAC 194
>gi|218197170|gb|EEC79597.1| hypothetical protein OsI_20781 [Oryza sativa Indica Group]
Length = 206
Score = 298 bits (764), Expect = 8e-79, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 168/204 (82%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYDVN +++F +L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID D G+ R +P+KKA EWC +GNIPYFETSAKED N+D AFLC+A++AL++EH +
Sbjct: 125 GNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKEDYNVDSAFLCIAKLALEHEHDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY++ +++ + E GCAC
Sbjct: 185 DIYFKT--VAQPAPDTEHTSGCAC 206
>gi|115465131|ref|NP_001056165.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|113579716|dbj|BAF18079.1| Os05g0536900 [Oryza sativa Japonica Group]
gi|215740455|dbj|BAG97111.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632372|gb|EEE64504.1| hypothetical protein OsJ_19355 [Oryza sativa Japonica Group]
Length = 206
Score = 297 bits (760), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 168/204 (82%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYDVN +++F +L W +EFL QA P + + PF+LL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID D G+ R +P+KKA EWC +GNIPYFETSAK+D N+D AFLC+A++AL++EH +
Sbjct: 125 GNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQ 184
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY++ +++ + E GCAC
Sbjct: 185 DIYFKT--VAQPAPDTEHTSGCAC 206
>gi|77745448|gb|ABB02623.1| unknown [Solanum tuberosum]
gi|78191474|gb|ABB29958.1| unknown [Solanum tuberosum]
Length = 206
Score = 295 bits (756), Expect = 6e-78, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 163/203 (80%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GGC C
Sbjct: 184 EIYLPDTIDVAASSQQRTGGCEC 206
>gi|449448032|ref|XP_004141770.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 295 bits (755), Expect = 8e-78, Method: Compositional matrix adjust.
Identities = 141/203 (69%), Positives = 163/203 (80%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I ++ GC C
Sbjct: 184 EVYLPDTIDVAGGRQQRSTGCEC 206
>gi|56417345|gb|AAV90623.1| Rab7 [Cenchrus americanus]
Length = 207
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE L NWREEFL QA P + E PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLLQASPSDPENFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR + +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE +D
Sbjct: 124 GNKIDVDGGNSRTISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPED 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 184 DMYLPDTIDVGGAGRQQRSSGCEC 207
>gi|326512278|dbj|BAJ96120.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 207
Score = 293 bits (751), Expect = 2e-77, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+++DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVKIDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE L NWREEFL QA P + E PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNNWREEFLIQASPSDPENFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I + +QR GC C
Sbjct: 184 DIYLPDTIDMGGAGRQQRSTGCEC 207
>gi|226494367|ref|NP_001150039.1| ras-related protein Rab7 [Zea mays]
gi|195618620|gb|ACG31140.1| ras-related protein Rab7 [Zea mays]
gi|195625594|gb|ACG34627.1| ras-related protein Rab7 [Zea mays]
gi|195636256|gb|ACG37596.1| ras-related protein Rab7 [Zea mays]
gi|223949159|gb|ACN28663.1| unknown [Zea mays]
Length = 207
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV N+FS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 184 DMYLPDTIDVGGAGRQQRSSGCEC 207
>gi|297830542|ref|XP_002883153.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
gi|297328993|gb|EFH59412.1| hypothetical protein ARALYDRAFT_898258 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 162/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSNQQRSTGCEC 206
>gi|255549976|ref|XP_002516039.1| protein with unknown function [Ricinus communis]
gi|223544944|gb|EEF46459.1| protein with unknown function [Ricinus communis]
Length = 207
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 144/204 (70%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +DKL TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDKLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +QR GC C
Sbjct: 184 EIYLPDTIDVGGGGRQQRSTGCEC 207
>gi|449491738|ref|XP_004158989.1| PREDICTED: ras-related protein RABG3d-like isoform 1 [Cucumis
sativus]
Length = 206
Score = 292 bits (748), Expect = 5e-77, Method: Compositional matrix adjust.
Identities = 140/203 (68%), Positives = 162/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQLDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKN ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNGPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I ++ GC C
Sbjct: 184 EVYLPDTIDVAGGRQQRSTGCEC 206
>gi|3914550|sp|O24461.1|RAB7_PRUAR RecName: Full=Ras-related protein Rab7
gi|2317874|gb|AAB71504.1| Rab7 GTP binding protein [Prunus armeniaca]
Length = 207
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D+AF C+A+ AL NE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I +QR GC C
Sbjct: 184 EIYLPDTIDVAGGGRQQRSSGCEC 207
>gi|116783756|gb|ABK23074.1| unknown [Picea sitchensis]
gi|116792182|gb|ABK26263.1| unknown [Picea sitchensis]
gi|224284728|gb|ACN40095.1| unknown [Picea sitchensis]
gi|224286503|gb|ACN40958.1| unknown [Picea sitchensis]
Length = 206
Score = 292 bits (748), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 164/206 (79%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 1 MSARRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVLKSFDNLNNWRDEFLIQASPSDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE
Sbjct: 121 VVLGNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I ++ GC C
Sbjct: 181 PEEEIYLPDTIDVNAGRPQRTSGCDC 206
>gi|357128479|ref|XP_003565900.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 207
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE L +WREEFL QA P + E PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 184 DIYLPDTIDVGGAGRQQRSSGCEC 207
>gi|7388049|sp|Q9XER8.1|RAB7_GOSHI RecName: Full=Ras-related protein Rab7
gi|4545231|gb|AAD22451.1|AF116243_1 RAS-related GTP-binding protein [Gossypium hirsutum]
Length = 207
Score = 292 bits (747), Expect = 7e-77, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P+ I QR GC C
Sbjct: 184 EIYLPETIDVASGGRPQRSTGCEC 207
>gi|116781281|gb|ABK22035.1| unknown [Picea sitchensis]
gi|116793125|gb|ABK26622.1| unknown [Picea sitchensis]
Length = 206
Score = 291 bits (746), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 165/203 (81%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+LVT+QIWD
Sbjct: 4 RKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWR+EFL QA+P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVIKSFDNLDNWRQEFLIQANPTDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D DGG SRVV +KKA WCA +GNIPYFETSAKED N++EAF C+A+ ALKNE +
Sbjct: 124 GNKTDVDGGHSRVVSEKKAKMWCAAKGNIPYFETSAKEDMNVEEAFQCIAKNALKNEPDE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P+ I V++ C C
Sbjct: 184 EIYLPETIDVGHVGVQRPSACQC 206
>gi|225442589|ref|XP_002284408.1| PREDICTED: ras-related protein Rab7 [Vitis vinifera]
gi|297743251|emb|CBI36118.3| unnamed protein product [Vitis vinifera]
Length = 207
Score = 291 bits (745), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I +QR GC C
Sbjct: 184 EIYLPDTIDVASGGRQQRSSGCEC 207
>gi|384253777|gb|EIE27251.1| Rab7/RabG-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 208
Score = 290 bits (742), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 136/202 (67%), Positives = 158/202 (78%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+LVT+QIWDT
Sbjct: 7 KRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQIWDT 66
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLVYDVN QKTFE+L NWR+EFL QA P + PFV+LG
Sbjct: 67 AGQERFQSLGVAFYRGADCCVLVYDVNSQKTFENLDNWRDEFLIQASPSNPDNFPFVVLG 126
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D G SRVV +KKA +WC +G IPYFETSAKED N+D AF C+A ALKNE ++
Sbjct: 127 NKVDMDEGRSRVVTEKKAKQWCTAKGGIPYFETSAKEDLNVDSAFQCIARNALKNETEEE 186
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
Y P + + +R C
Sbjct: 187 LYMPDTVDMNAQAIPKRNSSCC 208
>gi|302784056|ref|XP_002973800.1| rab family GTPase [Selaginella moellendorffii]
gi|302803686|ref|XP_002983596.1| rab family GTPase [Selaginella moellendorffii]
gi|300148839|gb|EFJ15497.1| rab family GTPase [Selaginella moellendorffii]
gi|300158132|gb|EFJ24755.1| rab family GTPase [Selaginella moellendorffii]
Length = 207
Score = 290 bits (742), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 136/204 (66%), Positives = 167/204 (81%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLK I+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+LVT+QIWD
Sbjct: 4 RKRTLLKAIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PF++L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWREEFLIQASPSDPENFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKED N++ AF C+A+ AL++E ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEDYNVEAAFQCIAKNALRSEPEE 183
Query: 188 IYYQPQGISET-VSEVEQRGGCAC 210
+Y P I T + + + GC C
Sbjct: 184 DFYLPDTIDITNNNRLPRSSGCEC 207
>gi|148466386|gb|ABQ65168.1| Rab7 [Prosopis juliflora]
Length = 207
Score = 290 bits (741), Expect = 3e-76, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 164/204 (80%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L +WREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I V +QR GC C
Sbjct: 184 EVYLPDTIDVGVGGRQQRFTGCEC 207
>gi|357468399|ref|XP_003604484.1| Ras-related protein Rab7 [Medicago truncatula]
gi|217075638|gb|ACJ86179.1| unknown [Medicago truncatula]
gi|355505539|gb|AES86681.1| Ras-related protein Rab7 [Medicago truncatula]
gi|388494386|gb|AFK35259.1| unknown [Medicago truncatula]
Length = 207
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE+L +WREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +QR GC C
Sbjct: 184 EMYLPDTIDVGNGGRQQRSTGCEC 207
>gi|224103431|ref|XP_002313053.1| predicted protein [Populus trichocarpa]
gi|118485510|gb|ABK94609.1| unknown [Populus trichocarpa]
gi|222849461|gb|EEE87008.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 290 bits (741), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 EIYLPDTIDVGTSSQPRSTGCEC 206
>gi|357454943|ref|XP_003597752.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355486800|gb|AES68003.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 209
Score = 289 bits (740), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 140/209 (66%), Positives = 167/209 (79%), Gaps = 1/209 (0%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
++ + +RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+L T
Sbjct: 1 MASHSRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQVEDRLFT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+FE+L +WREEFL QA P + E
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNHWREEFLIQASPSDPENF 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
PFV+LGNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+ + ALK
Sbjct: 121 PFVVLGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECITKNALK 180
Query: 183 NEHKDIYYQPQGISETVSEVEQRG-GCAC 210
NE ++ Y P+ I +QR GC C
Sbjct: 181 NEPEEELYMPETIDVGGGGRQQRSTGCEC 209
>gi|408784807|gb|AFU91386.1| small GTP binding protein [Arachis hypogaea]
Length = 206
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 162/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSSQQRATGCEC 206
>gi|388507798|gb|AFK41965.1| unknown [Lotus japonicus]
Length = 206
Score = 289 bits (739), Expect = 5e-76, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 162/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGNSSQQRASGCEC 206
>gi|15233284|ref|NP_188231.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
gi|75274463|sp|Q9LW76.1|RAG3C_ARATH RecName: Full=Ras-related protein RABG3c; Short=AtRABG3c; AltName:
Full=Ras-related protein Rab73; Short=AtRab73; AltName:
Full=Ras-related protein Rab7D; Short=AtRab7D
gi|9294457|dbj|BAB02676.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|15718412|dbj|BAB68373.1| AtRab73 [Arabidopsis thaliana]
gi|21536921|gb|AAM61253.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|30102532|gb|AAP21184.1| At3g16100 [Arabidopsis thaliana]
gi|110735857|dbj|BAE99904.1| putative RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|332642250|gb|AEE75771.1| RAB GTPase-like protein G3C [Arabidopsis thaliana]
Length = 206
Score = 289 bits (739), Expect = 6e-76, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQIWD
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV DVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D DGG SRVV +KKA WCA +GNIPYFETSAK+ N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + ++ GC C
Sbjct: 184 EVYLPDTIDVAGARQQRSTGCEC 206
>gi|115435424|ref|NP_001042470.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|56784369|dbj|BAD82408.1| putative RAB7D [Oryza sativa Japonica Group]
gi|113532001|dbj|BAF04384.1| Os01g0227300 [Oryza sativa Japonica Group]
gi|215687298|dbj|BAG91885.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215765542|dbj|BAG87239.1| unnamed protein product [Oryza sativa Japonica Group]
gi|218187795|gb|EEC70222.1| hypothetical protein OsI_00983 [Oryza sativa Indica Group]
gi|222618023|gb|EEE54155.1| hypothetical protein OsJ_00961 [Oryza sativa Japonica Group]
Length = 207
Score = 288 bits (738), Expect = 7e-76, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQIDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE L +WREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNSWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 124 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAIKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 184 EIYLPDTIDVGGAGRQQRSSGCEC 207
>gi|224080323|ref|XP_002306097.1| predicted protein [Populus trichocarpa]
gi|118481635|gb|ABK92759.1| unknown [Populus trichocarpa]
gi|222849061|gb|EEE86608.1| predicted protein [Populus trichocarpa]
Length = 206
Score = 288 bits (738), Expect = 8e-76, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F+ L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDHLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGVNVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 EIYLPDTIDVGSSSQPRSTGCEC 206
>gi|623588|gb|AAA74118.1| putative [Nicotiana tabacum]
Length = 206
Score = 288 bits (737), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 139/201 (69%), Positives = 158/201 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEIQFEDRLYTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVY VNV K+FE+L NWREEFL QA P + E PF++L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYYVNVMKSFENLNNWREEFLIQASPSDPENFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KK WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE +D
Sbjct: 124 GNKIDVDGGNSRVVSEKKVKAWCASKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPED 183
Query: 188 IYYQPQGISETVSEVEQRGGC 208
Y P I + GC
Sbjct: 184 EIYLPDTIDVAGGSQSRSTGC 204
>gi|356538781|ref|XP_003537879.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Glycine max]
gi|356538783|ref|XP_003537880.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Glycine max]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGLNVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSSQPRATGCEC 206
>gi|351726788|ref|NP_001238418.1| uncharacterized protein LOC100305642 [Glycine max]
gi|255626165|gb|ACU13427.1| unknown [Glycine max]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSSQPRATGCEC 206
>gi|449465391|ref|XP_004150411.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|449508065|ref|XP_004163207.1| PREDICTED: ras-related protein Rab7-like [Cucumis sativus]
gi|34484308|gb|AAQ72787.1| putative GTP-binding protein [Cucumis sativus]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + + GC C
Sbjct: 184 EIYLPDTIDVGSNNQPRSSGCDC 206
>gi|297830192|ref|XP_002882978.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
gi|297328818|gb|EFH59237.1| hypothetical protein ARALYDRAFT_479064 [Arabidopsis lyrata subsp.
lyrata]
Length = 206
Score = 288 bits (736), Expect = 1e-75, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQIWD
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV DVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D DGG SRVV +KKA WCA +GNIPYFETSAKE N+D F C+A+ ALKNE ++
Sbjct: 124 GNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDATFECIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + ++ GC C
Sbjct: 184 QVYLPDTIDVAGARQQRSTGCEC 206
>gi|255536817|ref|XP_002509475.1| protein with unknown function [Ricinus communis]
gi|223549374|gb|EEF50862.1| protein with unknown function [Ricinus communis]
Length = 206
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ AL + ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALLSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 EIYLPDTIDVGTSSQPRSTGCEC 206
>gi|351721665|ref|NP_001237217.1| uncharacterized protein LOC100305824 [Glycine max]
gi|356521867|ref|XP_003529572.1| PREDICTED: ras-related protein Rab7-like [Glycine max]
gi|1370188|emb|CAA98171.1| RAB7D [Lotus japonicus]
gi|255626709|gb|ACU13699.1| unknown [Glycine max]
Length = 207
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 140/204 (68%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L +WREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRV+ +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +QR GC C
Sbjct: 184 EMYLPDTIDVGGGGRQQRSTGCEC 207
>gi|15222098|ref|NP_175355.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|79319588|ref|NP_001031161.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|75215673|sp|Q9XI98.1|RAG3E_ARATH RecName: Full=Ras-related protein RABG3e; Short=AtRABG3e; AltName:
Full=Ras-related protein Rab74; Short=AtRab74
gi|5430767|gb|AAD43167.1|AC007504_22 Putative RAB7 GTP-binding Protein [Arabidopsis thaliana]
gi|15718414|dbj|BAB68374.1| AtRab74 [Arabidopsis thaliana]
gi|28416619|gb|AAO42840.1| At1g49300 [Arabidopsis thaliana]
gi|110743311|dbj|BAE99544.1| hypothetical protein [Arabidopsis thaliana]
gi|332194293|gb|AEE32414.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
gi|332194294|gb|AEE32415.1| RAB GTPase homolog G3E [Arabidopsis thaliana]
Length = 206
Score = 287 bits (735), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGGSSRVV +KKA WCA +GNIPY+ETSAK N+++AFLC+ A+K+ ++
Sbjct: 124 GNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 EMYLPDTIDVGTSNPQRSTGCEC 206
>gi|15218194|ref|NP_175638.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
gi|297852978|ref|XP_002894370.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|75169431|sp|Q9C820.1|RAG3D_ARATH RecName: Full=Ras-related protein RABG3d; Short=AtRABG3d; AltName:
Full=Ras-related protein Rab72; Short=AtRab72
gi|12323132|gb|AAG51552.1|AC037424_17 GTP-binding protein RAB7D, putative; 63624-64923 [Arabidopsis
thaliana]
gi|15718410|dbj|BAB68372.1| AtRab72 [Arabidopsis thaliana]
gi|18389228|gb|AAL67057.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|20465885|gb|AAM20047.1| putative GTP-binding protein RAB7D [Arabidopsis thaliana]
gi|297340212|gb|EFH70629.1| hypothetical protein ARALYDRAFT_474344 [Arabidopsis lyrata subsp.
lyrata]
gi|332194656|gb|AEE32777.1| RAB GTPase homolog G3D [Arabidopsis thaliana]
Length = 206
Score = 287 bits (734), Expect = 2e-75, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 162/206 (78%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK D DGG SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+ + A KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I + ++ GC C
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>gi|297741446|emb|CBI32577.3| unnamed protein product [Vitis vinifera]
Length = 253
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 51 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 110
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 111 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 170
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK ++
Sbjct: 171 GNKVDVDGGNSRVVSDKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKTGEEE 230
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 231 EIYLPDTIDVGSSSQQRSSGCEC 253
>gi|15230211|ref|NP_188512.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
gi|75273925|sp|Q9LS94.1|RAG3F_ARATH RecName: Full=Ras-related protein RABG3f; Short=AtRABG3f; AltName:
Full=Ras-related protein Rab71; Short=AtRab71; AltName:
Full=Ras-related protein Rab7B; Short=AtRab7B
gi|9293907|dbj|BAB01810.1| RAS-related GTP-binding protein [Arabidopsis thaliana]
gi|14334928|gb|AAK59641.1| putative GTP binding protein [Arabidopsis thaliana]
gi|15718408|dbj|BAB68371.1| AtRab71 [Arabidopsis thaliana]
gi|16323368|gb|AAL15178.1| putative GTP binding protein [Arabidopsis thaliana]
gi|332642631|gb|AEE76152.1| Ras-related protein Rab-7A [Arabidopsis thaliana]
Length = 206
Score = 286 bits (733), Expect = 3e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSNQQRSTGCEC 206
>gi|1370186|emb|CAA98170.1| RAB7C [Lotus japonicus]
Length = 206
Score = 286 bits (732), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAK N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKGGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGNSSQQRASGCEC 206
>gi|388520895|gb|AFK48509.1| unknown [Lotus japonicus]
Length = 207
Score = 286 bits (731), Expect = 4e-75, Method: Compositional matrix adjust.
Identities = 139/204 (68%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+ GDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIIFGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L +WREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNHWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRV+ +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVISEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +QR GC C
Sbjct: 184 EMYLPDTIDVGGGGRQQRSTGCEC 207
>gi|3914557|sp|Q40787.1|RAB7_CENCI RecName: Full=Ras-related protein Rab7
gi|1155265|gb|AAA85273.1| possible apospory-associated protein [Cenchrus ciliaris]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>gi|115464893|ref|NP_001056046.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|46575953|gb|AAT01314.1| putative GTP-binding protein Rab7a [Oryza sativa Japonica Group]
gi|113579597|dbj|BAF17960.1| Os05g0516600 [Oryza sativa Japonica Group]
gi|215767238|dbj|BAG99466.1| unnamed protein product [Oryza sativa Japonica Group]
gi|215767294|dbj|BAG99522.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222632232|gb|EEE64364.1| hypothetical protein OsJ_19205 [Oryza sativa Japonica Group]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>gi|388509354|gb|AFK42743.1| unknown [Lotus japonicus]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRGTLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGNSSQQRASGCEC 206
>gi|357473205|ref|XP_003606887.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355507942|gb|AES89084.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA+P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF +A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSNQPRSSGCEC 206
>gi|255075683|ref|XP_002501516.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226516780|gb|ACO62774.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 206
Score = 286 bits (731), Expect = 5e-75, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 165/203 (81%), Gaps = 3/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV KFS+QYKATIGADF+TKE+Q+DD+LVT+QIWD
Sbjct: 4 RKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVN KTF++L+NWR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVHDVNTAKTFDNLENWRDEFLIQASPNDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGN--IPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNK D DGG+SRVV +KKA WC +GN IPYFETSAKED N++EAF C+A ALKNE
Sbjct: 124 GNKTDVDGGASRVVSEKKAKSWCTSKGNGDIPYFETSAKEDVNVEEAFACIARNALKNEA 183
Query: 186 KDIYYQPQGISETVSEVEQRGGC 208
++ Y P + + ++GGC
Sbjct: 184 EEEIYLPDTV-DVNQGAAKKGGC 205
>gi|303277387|ref|XP_003057987.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226460644|gb|EEH57938.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 206
Score = 285 bits (730), Expect = 6e-75, Method: Compositional matrix adjust.
Identities = 135/202 (66%), Positives = 163/202 (80%), Gaps = 1/202 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV KFS+QYKATIGADF+TKE+Q+DD+LVT+QIWD
Sbjct: 4 RKRTLLKVIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVQVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVN KTFE++ NWR+EFL QA+P + ++ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLTYDVNAGKTFENIDNWRDEFLIQANPADADSFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G +RVV +KKA WCA +GNIPYFETSAKED N++ AF C+A ALKNE ++
Sbjct: 124 GNKVDVDEGKARVVSEKKAKSWCAGKGNIPYFETSAKEDYNVEAAFQCIARNALKNETEE 183
Query: 188 IYYQPQGISETVSE-VEQRGGC 208
Y P + +Q GGC
Sbjct: 184 EVYLPDTVDVNGRRGAQQAGGC 205
>gi|359475302|ref|XP_003631644.1| PREDICTED: ras-related protein Rab7-like [Vitis vinifera]
gi|147783576|emb|CAN61313.1| hypothetical protein VITISV_013388 [Vitis vinifera]
Length = 206
Score = 285 bits (729), Expect = 8e-75, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV KKA WCA +GNIPYFETSAKE N++EAF C+A+ ALK ++
Sbjct: 124 GNKVDVDGGNSRVVSDKKARAWCASKGNIPYFETSAKEGINVEEAFQCIAKNALKTGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 EIYLPDTIDVGSSSQQRSSGCEC 206
>gi|217071054|gb|ACJ83887.1| unknown [Medicago truncatula]
gi|388493264|gb|AFK34698.1| unknown [Medicago truncatula]
Length = 206
Score = 285 bits (729), Expect = 9e-75, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVDKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA+P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQANPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF +A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSNQPRSSGCEC 206
>gi|400923|sp|P31022.1|RAB7_PEA RecName: Full=Ras-related protein Rab7
gi|20756|emb|CAA46600.1| RAS-related GTP-binding protein [Pisum sativum]
Length = 206
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA+P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF +A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSSQPRSTGCEC 206
>gi|219887285|gb|ACL54017.1| unknown [Zea mays]
gi|413949817|gb|AFW82466.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 206
Score = 285 bits (728), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>gi|293332671|ref|NP_001169258.1| uncharacterized protein LOC100383121 [Zea mays]
gi|242088493|ref|XP_002440079.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|223975857|gb|ACN32116.1| unknown [Zea mays]
gi|241945364|gb|EES18509.1| hypothetical protein SORBIDRAFT_09g025620 [Sorghum bicolor]
gi|413946071|gb|AFW78720.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591123|tpg|DAA41694.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 206
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>gi|623590|gb|AAA74119.1| putative [Nicotiana tabacum]
Length = 205
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/200 (68%), Positives = 159/200 (79%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
N+LKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWDTAG
Sbjct: 6 NVLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWDTAG 65
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFV+LGNK
Sbjct: 66 QERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVVLGNK 125
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
+D DGG+SRVV +KKA WCA +GNIPYFETSAKE ++EAF C+A+ ALK+ ++ Y
Sbjct: 126 VDIDGGNSRVVSEKKARAWCASKGNIPYFETSAKEGTFVEEAFQCIAKNALKSGEEEEIY 185
Query: 191 QPQGISETVSEVEQRGGCAC 210
P + S + GGC C
Sbjct: 186 LPDTLDVGTSSQPRTGGCEC 205
>gi|326494438|dbj|BAJ90488.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 161/203 (79%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGINVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + + V +G C
Sbjct: 184 ELYMPDTV-DVVGGNRGQGSSGC 205
>gi|147828269|emb|CAN75406.1| hypothetical protein VITISV_010510 [Vitis vinifera]
Length = 207
Score = 284 bits (727), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 136/187 (72%), Positives = 157/187 (83%), Gaps = 2/187 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEE 183
Query: 188 --IYYQP 192
I+ P
Sbjct: 184 EIIFRTP 190
>gi|346467497|gb|AEO33593.1| hypothetical protein [Amblyomma maculatum]
Length = 229
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%), Gaps = 1/203 (0%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGAD +TKE+Q +D+L TLQIW
Sbjct: 27 VRRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADLLTKEVQFEDRLFTLQIW 86
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + + PFV+
Sbjct: 87 DTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPDNFPFVV 146
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N++ AF C+A+ A KNE +
Sbjct: 147 LGNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNAFKNEPE 206
Query: 187 DIYYQPQGISETVSEVEQR-GGC 208
+ Y P I +QR GC
Sbjct: 207 EEIYLPDTIDVAGGSRQQRSSGC 229
>gi|326505594|dbj|BAJ95468.1| predicted protein [Hordeum vulgare subsp. vulgare]
gi|326533112|dbj|BAJ93528.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 206
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQYEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDIDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKDALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYIPDTVDVVGGNRTQRSPGCC 206
>gi|218197104|gb|EEC79531.1| hypothetical protein OsI_20631 [Oryza sativa Indica Group]
Length = 206
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 158/203 (77%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDSGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>gi|3914539|sp|P93267.1|RAB7_MESCR RecName: Full=Ras-related protein Rab7A
gi|1842069|gb|AAB47557.1| Nt-rab7a homolog [Mesembryanthemum crystallinum]
Length = 207
Score = 284 bits (726), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLK+I+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKELQ +D+L TLQIWD
Sbjct: 4 RRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV K+FESL WREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGGS RVV +KKA WC +GNIPYFETSAK+ N++EAF C+A+ A++NE ++
Sbjct: 124 GNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNEPEE 183
Query: 188 IYYQPQGISETVSEVEQ-RGGCAC 210
Y P I S Q C C
Sbjct: 184 ETYLPDTIDMAGSTRPQSSSACEC 207
>gi|73913048|gb|AAZ91462.1| RAB7 [Hordeum vulgare]
Length = 184
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 128/178 (71%), Positives = 155/178 (87%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV KFSQQYKATIGADF+TKE+ ++D+LVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVNKKFSQQYKATIGADFLTKEVLIEDRLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN ++TF +L W +EF+ QA P + + PF+L+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNAKRTFNTLGTWHDEFINQAGPSDPKQFPFILV 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNK+D D GS RVVP+KKA +WC +G+IPYFETSAK+DCN+D AFLC+A++AL++EH
Sbjct: 124 GNKVDLDSGSRRVVPEKKAKDWCVAKGDIPYFETSAKDDCNVDTAFLCIAKLALEHEH 181
>gi|116672840|gb|ABK15561.1| small GTPase Rab2 [Capsicum annuum]
Length = 205
Score = 283 bits (725), Expect = 2e-74, Method: Compositional matrix adjust.
Identities = 139/203 (68%), Positives = 159/203 (78%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSG GKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGAGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLYTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE+L NWREEFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQASPSDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +G IPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKG-IPYFETSAKEGFNVDSAFQCIAKNALKNEPEE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + GC C
Sbjct: 183 EIYLPDTIDVAGGNQPRSTGCEC 205
>gi|357132958|ref|XP_003568095.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 161/203 (79%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + + V +G C
Sbjct: 184 ELYVPDTV-DVVGGNRGQGSSGC 205
>gi|357132966|ref|XP_003568099.1| PREDICTED: ras-related protein Rab7-like isoform 1 [Brachypodium
distachyon]
Length = 206
Score = 283 bits (724), Expect = 3e-74, Method: Compositional matrix adjust.
Identities = 133/188 (70%), Positives = 156/188 (82%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGI 195
Y P +
Sbjct: 184 ELYVPDTV 191
>gi|21536526|gb|AAM60858.1| GTP binding protein, putative [Arabidopsis thaliana]
Length = 206
Score = 281 bits (720), Expect = 8e-74, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L N REEFL QA P + E PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNRREEFLIQASPSDPENFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSNQQRSTGCEC 206
>gi|307106915|gb|EFN55159.1| hypothetical protein CHLNCDRAFT_35566 [Chlorella variabilis]
Length = 207
Score = 281 bits (718), Expect = 1e-73, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q+DD+LVT+QIWD
Sbjct: 4 RKRTLLKVIILGDSGVGKTSLMNQYVNKKFSSQYKATIGADFLTKEVQVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN KTF++L+NWR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSSKTFDNLENWRDEFLIQASPSDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D +GG +R V +KKA +WC +G IP+F+TSAKED N+D+AF +A ALKNE ++
Sbjct: 124 GNKVDVEGGKARQVSEKKAKQWCGAKGGIPHFDTSAKEDLNVDDAFQTIARNALKNESEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P+ + +R +C
Sbjct: 184 ELYIPETVDVNAQAAPRRAQSSC 206
>gi|29293694|gb|AAO67728.1| small GTP binding protein [Oryza sativa Indica Group]
Length = 206
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 131/188 (69%), Positives = 155/188 (82%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGD+GVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 124 GNKVDVDSGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEEAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGI 195
Y P +
Sbjct: 184 ELYVPDTV 191
>gi|168021899|ref|XP_001763478.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162685271|gb|EDQ71667.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 280 bits (717), Expect = 2e-73, Method: Compositional matrix adjust.
Identities = 139/206 (67%), Positives = 167/206 (81%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+LVT+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQASPSDQENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK+D DGG+SRVV +KKA WCA +G IPYFETSAKED N+D AF C+A+ ALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGGIPYFETSAKEDFNVDAAFQCIAKNALKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I S ++ GC C
Sbjct: 181 TEEEIYLPDTIDVNASRPQKTSGCEC 206
>gi|194695376|gb|ACF81772.1| unknown [Zea mays]
Length = 214
Score = 279 bits (714), Expect = 5e-73, Method: Compositional matrix adjust.
Identities = 135/203 (66%), Positives = 161/203 (79%), Gaps = 5/203 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ G +S + GC C
Sbjct: 184 EF--SIGYKRIISHYQ---GCYC 201
>gi|159465968|ref|XP_001691181.1| small rab-related GTPase [Chlamydomonas reinhardtii]
gi|2500075|sp|Q39573.1|YPTC5_CHLRE RecName: Full=GTP-binding protein YPTC5
gi|806726|gb|AAA82728.1| YptC5 [Chlamydomonas reinhardtii]
gi|158279153|gb|EDP04914.1| small rab-related GTPase [Chlamydomonas reinhardtii]
Length = 206
Score = 279 bits (713), Expect = 6e-73, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ K+R LLKVI+LGDSGVGKTSLMNQYV KF+++YKATIGADF+TKE+++DDK VT+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLGSAFYRGADCCVLV+DVN K+F+ L NWR+EF+ QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
++LGNKID +GGSSR V +KKA WCA +G+IPYFETSAKED N++ AF C+ AL+NE
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 185 HKDIYYQPQGIS-ETVSEVEQRGGC 208
++ + P + T + +R GC
Sbjct: 181 KEEELFMPDAVDMNTTATQRKRAGC 205
>gi|242055889|ref|XP_002457090.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
gi|241929065|gb|EES02210.1| hypothetical protein SORBIDRAFT_03g001085 [Sorghum bicolor]
Length = 239
Score = 278 bits (712), Expect = 7e-73, Method: Compositional matrix adjust.
Identities = 135/200 (67%), Positives = 156/200 (78%), Gaps = 1/200 (0%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+VI G+ GVGKTSLMNQYV N+FS QYKATIGADF+TKE+Q+DD+L TLQIWDTAGQ
Sbjct: 40 FLRVIFFGERGVGKTSLMNQYVNNRFSNQYKATIGADFLTKEVQIDDRLFTLQIWDTAGQ 99
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERFQSLG AFYRGADCCVLVYDVNV K+FE L NWREEFL QA P + E PFV+LGNKI
Sbjct: 100 ERFQSLGVAFYRGADCCVLVYDVNVTKSFERLNNWREEFLIQASPSDPENFPFVVLGNKI 159
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++ Y
Sbjct: 160 DVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEEDMYL 219
Query: 192 PQGISETVSEVEQR-GGCAC 210
P I + +QR GC C
Sbjct: 220 PDTIDVGGAGRQQRSSGCEC 239
>gi|186502145|ref|NP_001118357.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
gi|330252140|gb|AEC07234.1| RAB GTPase-like protein 7A [Arabidopsis thaliana]
Length = 204
Score = 278 bits (711), Expect = 1e-72, Method: Compositional matrix adjust.
Identities = 143/212 (67%), Positives = 165/212 (77%), Gaps = 17/212 (8%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
++K R LLKVIVLGDSGVGKTSLMNQYVY KF++QYKATIGADFVTKEL +D+K VTLQ
Sbjct: 3 SLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQ- 61
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
RFQSLG+AFYRGADCCVLVYDVN K+FE+L NW EFLKQA+P E E PFV
Sbjct: 62 -------RFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFV 114
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
L+GNK D DGG+SRVV K+A+EWC +GNIPY ETSAKED NIDEAFL VA IAL NE
Sbjct: 115 LIGNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNER 174
Query: 186 K---DIYYQPQG-ISETVSEV---EQRGGCAC 210
K DIY P+G ++V+++ +Q GCAC
Sbjct: 175 KQSNDIY--PRGQYHDSVTDIIDPDQSRGCAC 204
>gi|168064632|ref|XP_001784264.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162664184|gb|EDQ50913.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 206
Score = 276 bits (705), Expect = 4e-72, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 168/206 (81%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+LVT+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NWR+EFL QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLENWRDEFLIQASPSDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK+D DGG+SRVV +KKA WCA +G+IPYFETSAKED N+D AF +A+ ALKNE
Sbjct: 121 VVLGNKVDVDGGNSRVVSEKKAKAWCAAKGDIPYFETSAKEDFNVDVAFQVIAKNALKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I S ++ GC C
Sbjct: 181 TEEEIYVPDTIDVNSSRPQKASGCEC 206
>gi|358344526|ref|XP_003636340.1| Ras-related protein Rab7 [Medicago truncatula]
gi|355502275|gb|AES83478.1| Ras-related protein Rab7 [Medicago truncatula]
Length = 226
Score = 274 bits (700), Expect = 2e-71, Method: Compositional matrix adjust.
Identities = 134/203 (66%), Positives = 161/203 (79%), Gaps = 3/203 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKVIVLGDSGVGKTSLMNQY KFS + K TIGADFVTK+LQ+D+KLVTLQIWDT
Sbjct: 5 RRTLLKVIVLGDSGVGKTSLMNQYALKKFSLKCKGTIGADFVTKDLQIDNKLVTLQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
G+E FQ++ + FYRGADCCVLVYDVN ++F+ L +W ++FLK+ + H PF+LLG
Sbjct: 65 EGKETFQNVCADFYRGADCCVLVYDVNCFESFDILDSWHDDFLKKGNTSNHGISPFILLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-KD 187
NK+D DGG SRVVP+KKA +WCA +GNIPYFETSAKED N+D+AFLC+A+ AL NE +D
Sbjct: 125 NKVDIDGGKSRVVPEKKAKKWCASKGNIPYFETSAKEDFNVDDAFLCIAKTALANERDQD 184
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
I QP I + E EQR GCAC
Sbjct: 185 ICVQP--IWPAMLENEQRVGCAC 205
>gi|412985742|emb|CCO16942.1| unknown [Bathycoccus prasinos]
Length = 206
Score = 272 bits (695), Expect = 7e-71, Method: Compositional matrix adjust.
Identities = 133/206 (64%), Positives = 163/206 (79%), Gaps = 2/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTL 63
++ ++R LLK+I+LGDSGVGKTSLMNQYV KFS+QYKATIGADF+TKE+++DD+ LVT+
Sbjct: 1 MSARKRTLLKLIILGDSGVGKTSLMNQYVNRKFSKQYKATIGADFLTKEVKIDDENLVTM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERFQSLG AFYRGADCCVLVYDVN +++F++L+NWREEFL QA P + E P
Sbjct: 61 QIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNERSFQNLENWREEFLAQASPADAENFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGN-IPYFETSAKEDCNIDEAFLCVAEIALK 182
F++LGNK D DGG SRVV +KKAL +CA GN P+FETSAKED N+ +AF C A ALK
Sbjct: 121 FIVLGNKTDQDGGQSRVVSEKKALSFCAASGNQCPHFETSAKEDSNVQDAFECAARNALK 180
Query: 183 NEHKDIYYQPQGISETVSEVEQRGGC 208
NE ++ Y P I S + G C
Sbjct: 181 NEVEEEVYLPDTIVVNKSGSNKSGCC 206
>gi|47900425|gb|AAT39219.1| putative GTPase [Oryza sativa Japonica Group]
Length = 197
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 159/204 (77%), Gaps = 12/204 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSG YV KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSG---------YVNKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 55
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYDVN +++F +L W +EFL QA P + + PF+LL
Sbjct: 56 TAGQERFQSLGVAFYRGADCCMLVYDVNAKRSFNALNTWHDEFLTQASPSDPKHFPFILL 115
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID D G+ R +P+KKA EWC +GNIPYFETSAK+D N+D AFLC+A++AL++EH +
Sbjct: 116 GNKIDIDAGNRRAIPEKKAKEWCVSKGNIPYFETSAKDDYNVDSAFLCIAKLALEHEHDQ 175
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY+ + +++ + E GCAC
Sbjct: 176 DIYF--KTVAQPAPDTEHTSGCAC 197
>gi|224073923|ref|XP_002304199.1| predicted protein [Populus trichocarpa]
gi|118481755|gb|ABK92817.1| unknown [Populus trichocarpa]
gi|118489463|gb|ABK96534.1| unknown [Populus trichocarpa x Populus deltoides]
gi|222841631|gb|EEE79178.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D++ TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRMFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +Q GC C
Sbjct: 184 EIYLPDTIDVGGGGRQQTSTGCEC 207
>gi|168034819|ref|XP_001769909.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
gi|162678815|gb|EDQ65269.1| Rab7/RabG-family small GTPase [Physcomitrella patens subsp. patens]
Length = 214
Score = 271 bits (693), Expect = 1e-70, Method: Compositional matrix adjust.
Identities = 138/214 (64%), Positives = 166/214 (77%), Gaps = 8/214 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q++D+LVT+Q
Sbjct: 1 MSARKRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQVEDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ--------ADP 116
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWR+EFL Q A P
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLDNWRDEFLIQATFTLRLTASP 120
Query: 117 GEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+ E PFV+LGNK+D DGG+SRVV +KKA WCA +G IPYFETSAKED N+D AF +
Sbjct: 121 SDQENFPFVVLGNKVDVDGGNSRVVSEKKAKAWCAAKGGIPYFETSAKEDFNVDAAFQVI 180
Query: 177 AEIALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
A+ ALKNE ++ Y P I S ++ GC C
Sbjct: 181 AKNALKNETEEEIYLPDTIDMNASRPQKASGCEC 214
>gi|224059082|ref|XP_002299707.1| predicted protein [Populus trichocarpa]
gi|222846965|gb|EEE84512.1| predicted protein [Populus trichocarpa]
Length = 207
Score = 271 bits (692), Expect = 2e-70, Method: Compositional matrix adjust.
Identities = 141/204 (69%), Positives = 161/204 (78%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVHFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCAAKGNIPYFETSAKEGFNVDAAFQCIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I +Q GC C
Sbjct: 184 EIYLPDTIDVAGGGRQQTSTGCEC 207
>gi|549813|sp|P36864.1|YPTV5_VOLCA RecName: Full=GTP-binding protein yptV5
gi|409168|gb|AAA34254.1| GTP-binding protein [Volvox carteri]
Length = 205
Score = 268 bits (684), Expect = 2e-69, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 163/205 (79%), Gaps = 2/205 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ K+R +LK+I+LGDSGVGKTSLMNQYV KF+++YKATIGADF+TKE+++DDK VT+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLGSAFYRGADCC+LV+DVN K+F+ L NWR+EF+ QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + G +R V +KKA WCA +G+IPYFETSAKED N++ AF C+ AL+NE
Sbjct: 121 VVLGNKID-EVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 185 HKDIYYQPQGISETVSEVE-QRGGC 208
++ + P + S + +RGGC
Sbjct: 180 KEEELFVPDAVDMNTSATQRKRGGC 204
>gi|428177507|gb|EKX46386.1| hypothetical protein GUITHDRAFT_152339 [Guillardia theta CCMP2712]
Length = 206
Score = 266 bits (681), Expect = 3e-69, Method: Compositional matrix adjust.
Identities = 131/207 (63%), Positives = 162/207 (78%), Gaps = 5/207 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSARKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVNVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
WDTAGQERFQSLG AFYRGADCCVLV+DVNV KTFE+L +WR+EFL QA P + E PF
Sbjct: 61 TWDTAGQERFQSLGVAFYRGADCCVLVFDVNVAKTFENLDSWRDEFLIQAGPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + + RVV QKKAL WC +GNIPYFETSAKE N+++AF +A ALK E
Sbjct: 121 VVLGNKIDLE--NQRVVTQKKALAWCQAKGNIPYFETSAKEAINVEQAFQTIARNALKQE 178
Query: 185 HKDIYYQPQGI---SETVSEVEQRGGC 208
+D Y P + ++ S+ ++ G C
Sbjct: 179 TEDDLYIPDTVDVNADKPSDAKKFGAC 205
>gi|281200692|gb|EFA74910.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 203
Score = 263 bits (673), Expect = 3e-68, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 157/201 (78%), Gaps = 2/201 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGD+GVGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWD
Sbjct: 4 KKKVLLKVIILGDTGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV KTFE+L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RVV QK+A WC +GNIPYFETSAKE N+++AF +A+ A+K E
Sbjct: 124 GNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIAKNAIKLEDGL 181
Query: 188 IYYQPQGISETVSEVEQRGGC 208
++ P GI + + + C
Sbjct: 182 VFPIPPGIQVQPEQTQTKSSC 202
>gi|395334162|gb|EJF66538.1| hypothetical protein DICSQDRAFT_130795 [Dichomitus squalens
LYAD-421 SS1]
Length = 203
Score = 262 bits (669), Expect = 7e-68, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + S R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E D
Sbjct: 123 KIDME-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQDDQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I SE Q G C+C
Sbjct: 182 YVDYPDPI-RIDSESSQGGSCSC 203
>gi|330801205|ref|XP_003288620.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
gi|325081347|gb|EGC34866.1| hypothetical protein DICPUDRAFT_92126 [Dictyostelium purpureum]
Length = 203
Score = 261 bits (667), Expect = 1e-67, Method: Compositional matrix adjust.
Identities = 129/201 (64%), Positives = 155/201 (77%), Gaps = 2/201 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWD
Sbjct: 4 KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV KTFE+L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RVV QK+A WC +GNIPYFETSAKE N+++AF +A A+K E
Sbjct: 124 GNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGL 181
Query: 188 IYYQPQGISETVSEVEQRGGC 208
++ P GI Q+ GC
Sbjct: 182 VFPIPTGIQVQPEPQPQQSGC 202
>gi|392571674|gb|EIW64846.1| hypothetical protein TRAVEDRAFT_159540 [Trametes versicolor
FP-101664 SS1]
Length = 203
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 132/203 (65%), Positives = 155/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + S R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E D
Sbjct: 123 KIDME-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQDDQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I SE Q GC C
Sbjct: 182 YVDYPDPI-RIDSESSQSMGCNC 203
>gi|357132960|ref|XP_003568096.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 199
Score = 261 bits (666), Expect = 2e-67, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 154/203 (75%), Gaps = 8/203 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ--- 60
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
ERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 61 ----ERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 116
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 117 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNEPEE 176
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + + V +G C
Sbjct: 177 ELYVPDTV-DVVGGNRGQGSSGC 198
>gi|409051435|gb|EKM60911.1| hypothetical protein PHACADRAFT_247132 [Phanerochaete carnosa
HHB-10118-sp]
Length = 203
Score = 260 bits (664), Expect = 3e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + S R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVE-ESKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I SE Q GC+C
Sbjct: 182 YVDYPDPI-RIDSESSQNYGCSC 203
>gi|357128481|ref|XP_003565901.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 132/204 (64%), Positives = 152/204 (74%), Gaps = 12/204 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+Q+DD+L TLQ
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVQIDDRLFTLQ--- 60
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
SLG AFYRGADCCVLVYDVNV K+FE L +WREEFL QA P + E PFVLL
Sbjct: 61 --------SLGVAFYRGADCCVLVYDVNVTKSFEKLNSWREEFLIQASPSDPENFPFVLL 112
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 113 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEE 172
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 173 DIYLPDTIDVGGAGRQQRSSGCEC 196
>gi|384496448|gb|EIE86939.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 206
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 129/204 (63%), Positives = 155/204 (75%), Gaps = 3/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 5 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVN K+FE+L WR+EFL QA P + + PFVLL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAYDVNNSKSFEALDQWRDEFLVQASPRDPDRFPFVLL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + S R+V QK+A+ WC +GN+PYFETSAKE N+++AF +A+ AL E
Sbjct: 125 GNKIDVE-ESKRMVSQKRAMAWCQSKGNVPYFETSAKEAINVEQAFQTIAKNALSQETDV 183
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DI + P I E GCAC
Sbjct: 184 DIDF-PDTIQIPSGRQEHDPGCAC 206
>gi|169844390|ref|XP_001828916.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
gi|116510028|gb|EAU92923.1| RAB small monomeric GTPase [Coprinopsis cinerea okayama7#130]
Length = 203
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + G R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVEEG-KRQVTQKRAMAWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC C
Sbjct: 182 YVDYPDPI-QLDSESSQNYGCNC 203
>gi|409083335|gb|EKM83692.1| hypothetical protein AGABI1DRAFT_81446 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201611|gb|EKV51534.1| hypothetical protein AGABI2DRAFT_133199 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 259 bits (663), Expect = 4e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 158/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVIVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + G R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVEEG-KRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC+C
Sbjct: 182 YVDYPDPI-QLDSESSQNYGCSC 203
>gi|170084125|ref|XP_001873286.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164650838|gb|EDR15078.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 203
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 131/203 (64%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + G R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVEEG-KRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC C
Sbjct: 182 YVDYPDPI-QLDSESSQSYGCNC 203
>gi|345568482|gb|EGX51376.1| hypothetical protein AOL_s00054g446 [Arthrobotrys oligospora ATCC
24927]
Length = 216
Score = 259 bits (662), Expect = 5e-67, Method: Compositional matrix adjust.
Identities = 128/200 (64%), Positives = 153/200 (76%), Gaps = 3/200 (1%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+QIWDTAGQE
Sbjct: 18 LKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWDTAGQE 77
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RFQSLG AFYRGADCCVLVYDVN QK+FE+L +WR+EFL QA P + ++ PFV++GNKID
Sbjct: 78 RFQSLGVAFYRGADCCVLVYDVNNQKSFETLDSWRDEFLIQASPRDADSFPFVVIGNKID 137
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
D G R VPQK+A+ +C +GN+PYFETSAKE N+++AF +A AL E + Y
Sbjct: 138 VDDG-KRQVPQKRAMAFCQSKGNLPYFETSAKEAINVEQAFEVIARHALAQEEAEEYTGD 196
Query: 193 QGISETV--SEVEQRGGCAC 210
G S V R GCAC
Sbjct: 197 FGASTIVDIGADADRDGCAC 216
>gi|413946072|gb|AFW78721.1| hypothetical protein ZEAMMB73_253903 [Zea mays]
gi|414591124|tpg|DAA41695.1| TPA: hypothetical protein ZEAMMB73_061376 [Zea mays]
Length = 197
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 126/203 (62%), Positives = 150/203 (73%), Gaps = 9/203 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSG YV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 54
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 55 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 114
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N+++AF C+ + ALKNE ++
Sbjct: 115 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNEPEE 174
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 175 ELYVPDTVDVVGGNRAQRSSGCC 197
>gi|66825113|ref|XP_645911.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|548667|sp|P36411.1|RAB7A_DICDI RecName: Full=Ras-related protein Rab-7A
gi|414971|gb|AAA80152.1| Rab7 [Dictyostelium discoideum]
gi|60474031|gb|EAL71968.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 203
Score = 259 bits (661), Expect = 6e-67, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 153/201 (76%), Gaps = 2/201 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWD
Sbjct: 4 KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV KTFE+L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RVV QK+A WC +GNIPYFETSAKE N+++AF +A A+K E
Sbjct: 124 GNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGL 181
Query: 188 IYYQPQGISETVSEVEQRGGC 208
++ P I + GC
Sbjct: 182 VFPIPTNIQVIPEPQPAKSGC 202
>gi|392580232|gb|EIW73359.1| hypothetical protein TREMEDRAFT_42329 [Tremella mesenterica DSM
1558]
Length = 206
Score = 258 bits (659), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R+V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQEAET 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I SE Q GC+C
Sbjct: 183 ELYADYPDPI-RIDSESSQNYGCSC 206
>gi|58260438|ref|XP_567629.1| RAB small monomeric GTPase [Cryptococcus neoformans var. neoformans
JEC21]
gi|134117371|ref|XP_772912.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|321264105|ref|XP_003196770.1| RAB small monomeric GTPase [Cryptococcus gattii WM276]
gi|50255530|gb|EAL18265.1| hypothetical protein CNBK2830 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|57229710|gb|AAW46112.1| RAB small monomeric GTPase, putative [Cryptococcus neoformans var.
neoformans JEC21]
gi|317463247|gb|ADV24983.1| RAB small monomeric GTPase, putative [Cryptococcus gattii WM276]
Length = 206
Score = 258 bits (658), Expect = 1e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WD
Sbjct: 4 RKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R+V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQEAET 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I SE Q GC C
Sbjct: 183 ELYADYPDPI-RIDSESTQNYGCNC 206
>gi|302694835|ref|XP_003037096.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
gi|300110793|gb|EFJ02194.1| hypothetical protein SCHCODRAFT_72805 [Schizophyllum commune H4-8]
Length = 203
Score = 258 bits (658), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC C
Sbjct: 182 YVDYPDPI-QLDSESSQSYGCNC 203
>gi|449550712|gb|EMD41676.1| hypothetical protein CERSUDRAFT_79308 [Ceriporiopsis subvermispora
B]
Length = 203
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDME-ENKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I SE Q GC C
Sbjct: 182 YVDYPDPI-RIDSESSQSFGCGC 203
>gi|393218537|gb|EJD04025.1| hypothetical protein FOMMEDRAFT_19344 [Fomitiporia mediterranea
MF3/22]
Length = 203
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/202 (63%), Positives = 156/202 (77%), Gaps = 2/202 (0%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DI 188
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E + ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEVEL 181
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
Y + SE Q GC C
Sbjct: 182 YADYPDPIKIDSETSQNYGCNC 203
>gi|238584079|ref|XP_002390448.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
gi|215453864|gb|EEB91378.1| hypothetical protein MPER_10266 [Moniliophthora perniciosa FA553]
Length = 203
Score = 257 bits (657), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFATVAKNALTQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC C
Sbjct: 182 YVDYPDPI-QLDSESSQSYGCDC 203
>gi|392597178|gb|EIW86500.1| hypothetical protein CONPUDRAFT_114884 [Coniophora puteana
RWD-64-598 SS2]
Length = 203
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEQEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + E Q GC C
Sbjct: 182 YVDYPDPI-QIDRETSQNYGCNC 203
>gi|30024664|gb|AAP13582.1|AF407337_1 Ras-related protein Rab7 [Lentinula edodes]
Length = 203
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 130/203 (64%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALTQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + SE Q GC C
Sbjct: 182 YVDYPDPI-QLDSESSQSYGCNC 203
>gi|405119344|gb|AFR94117.1| RAB small monomeric GTPase [Cryptococcus neoformans var. grubii
H99]
Length = 206
Score = 257 bits (656), Expect = 2e-66, Method: Compositional matrix adjust.
Identities = 128/205 (62%), Positives = 157/205 (76%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WD
Sbjct: 4 RKKHLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTRELVVDDRVVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSNKSFEALDGWRDEFLVQASPHDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R+V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDME-ESKRMVSQKRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQEAET 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I SE Q GC C
Sbjct: 183 ELYADYPDPI-RIDSEGTQNYGCNC 206
>gi|390604173|gb|EIN13564.1| hypothetical protein PUNSTDRAFT_48509 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 203
Score = 256 bits (655), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 156/203 (76%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I E Q GC+C
Sbjct: 182 YVDYPDPI-RIDQESSQNYGCSC 203
>gi|393247992|gb|EJD55499.1| hypothetical protein AURDEDRAFT_50434 [Auricularia delicata
TFB-10046 SS5]
Length = 203
Score = 256 bits (654), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 127/202 (62%), Positives = 156/202 (77%), Gaps = 2/202 (0%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + + PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPDNFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DI 188
KID + S R V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ AL+ E + ++
Sbjct: 123 KIDVE-ESKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNALQQEAEVEL 181
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
Y + SE Q GC C
Sbjct: 182 YADYPDPIKIDSESSQSYGCNC 203
>gi|336376735|gb|EGO05070.1| hypothetical protein SERLA73DRAFT_174086 [Serpula lacrymans var.
lacrymans S7.3]
gi|336389693|gb|EGO30836.1| hypothetical protein SERLADRAFT_455120 [Serpula lacrymans var.
lacrymans S7.9]
Length = 203
Score = 256 bits (653), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 129/203 (63%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVVVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPESFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDVE-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQETEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + E Q GC C
Sbjct: 182 YVDYPDPI-QIDRESTQSYGCNC 203
>gi|19918938|dbj|BAB88682.1| small GTPase AvaA [Emericella nidulans]
gi|259489719|tpe|CBF90222.1| TPA: Small GTPase AvaA [Source:UniProtKB/TrEMBL;Acc:Q8TGD9]
[Aspergillus nidulans FGSC A4]
Length = 205
Score = 255 bits (652), Expect = 7e-66, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 157/206 (76%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ +LKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVIGNKIDME-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ Y + + +R GCAC
Sbjct: 180 EAEEYGGDYTDPINIHDTTERDGCAC 205
>gi|389742197|gb|EIM83384.1| hypothetical protein STEHIDRAFT_123821 [Stereum hirsutum FP-91666
SS1]
Length = 203
Score = 255 bits (652), Expect = 8e-66, Method: Compositional matrix adjust.
Identities = 128/203 (63%), Positives = 157/203 (77%), Gaps = 4/203 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 123 KIDME-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 181
Query: 190 Y--QPQGISETVSEVEQRGGCAC 210
Y P I + ++ Q GC C
Sbjct: 182 YVDYPDPI-KINADSSQSYGCNC 203
>gi|378726191|gb|EHY52650.1| Ras-like protein Rab7 [Exophiala dermatitidis NIH/UT8656]
Length = 205
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/206 (59%), Positives = 157/206 (76%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD++VTLQ
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSTSYKATIGADFLTKEVTVDDRIVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPESFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID G R++ QK+AL +C RG +PYFETSAKE N+++AF +A AL E
Sbjct: 121 VVIGNKIDL-GEERRMISQKRALAYCQQRGQMPYFETSAKESINVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ Y ++ ++R GCAC
Sbjct: 180 ESEEYGGDFSDPININLDQERDGCAC 205
>gi|30681167|ref|NP_849347.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
gi|124301050|gb|ABN04777.1| At4g09720 [Arabidopsis thaliana]
gi|332657384|gb|AEE82784.1| RAB GTPase homolog G3A [Arabidopsis thaliana]
Length = 172
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 123/173 (71%), Positives = 145/173 (83%), Gaps = 4/173 (2%)
Query: 40 QYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKT 99
QYKATIGADFVTKELQ+ +KLVTLQIWDTAGQERFQSLG+AFYRGADCC LVYDVNV ++
Sbjct: 2 QYKATIGADFVTKELQIGEKLVTLQIWDTAGQERFQSLGAAFYRGADCCALVYDVNVLRS 61
Query: 100 FESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYF 159
F++L+ W EEFLKQA P + + PF++LGNKID DGGSSRVV KKA +WCA GNIPYF
Sbjct: 62 FDNLETWHEEFLKQASPSDPKTFPFIVLGNKIDVDGGSSRVVSDKKAADWCASNGNIPYF 121
Query: 160 ETSAKEDCNIDEAFLCVAEIALKNEH-KDIYYQPQGISETVSEVEQR-GGCAC 210
ETSAK+D N+DEAFL +A+ AL NEH +DIY+ QGI + V+E E + GGCAC
Sbjct: 122 ETSAKDDFNVDEAFLTIAKTALANEHEQDIYF--QGIPDAVTENEPKGGGCAC 172
>gi|291510246|gb|ADE10079.1| Rab7 [Tremella fuciformis]
Length = 206
Score = 254 bits (650), Expect = 1e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFEALDGWRDEFLVQASPHDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R+V QK+A+ WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDME-ESKRMVSQKRAMTWCQAKSNIPYFETSAKEAINVEQAFQTIAKNALAQEAEA 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I SE Q GC C
Sbjct: 183 ELYTDYPDPI-RIDSESSQNYGCNC 206
>gi|290992188|ref|XP_002678716.1| rab family small GTPase [Naegleria gruberi]
gi|284092330|gb|EFC45972.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 254 bits (648), Expect = 2e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 155/205 (75%), Gaps = 4/205 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGAD CVLV+D V KTFE++ +WR+EFL QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADSCVLVFDATVAKTFENINSWRDEFLIQAGPPDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++ NKID D R+VPQK+AL WC +GNIPYFE SAKE N+++AF +A AL E
Sbjct: 121 VVIANKIDLD---QRIVPQKRALAWCKAKGNIPYFECSAKEGTNVEQAFQTIARNALGKE 177
Query: 185 HKDIYYQPQGISETVSEVE-QRGGC 208
Y Q I+E E + ++ GC
Sbjct: 178 EDTPYTGGQSITEFPDEPQPKKSGC 202
>gi|195998137|ref|XP_002108937.1| Rab7 protein [Trichoplax adhaerens]
gi|190589713|gb|EDV29735.1| Rab7 protein [Trichoplax adhaerens]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 150/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV V +F+SL WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTVANSFKSLDGWRDEFLIQASPRDSENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + +R V K+A WC + NIPYFETSAKE N+++AF +A+ AL E
Sbjct: 124 GNKVDLE---NRAVTMKRAQNWCTSKNNIPYFETSAKEAINVEQAFQTIAKNALARESDV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I SE + GC C
Sbjct: 181 SVYNDFPDPIKLNNSETPKSDGCGC 205
>gi|317037167|ref|XP_001398680.2| Ras-related protein Rab7 [Aspergillus niger CBS 513.88]
gi|350630527|gb|EHA18899.1| hypothetical protein ASPNIDRAFT_54109 [Aspergillus niger ATCC 1015]
Length = 205
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 156/206 (75%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + +R GCAC
Sbjct: 180 EAEEFSGEFSDPINIHLDGERDGCAC 205
>gi|218511591|gb|ACK77787.1| RAB7 [Cyprinus carpio]
Length = 204
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/204 (61%), Positives = 150/204 (73%), Gaps = 4/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVDQAFQTIARNALKQESVE 180
Query: 188 IYYQPQGIS-ETVSEVEQRGGCAC 210
Y P I V GC+C
Sbjct: 181 TYDFPDQIKLRDDRPVSSSDGCSC 204
>gi|340368936|ref|XP_003383006.1| PREDICTED: ras-related protein Rab-7a-like [Amphimedon
queenslandica]
Length = 206
Score = 253 bits (645), Expect = 4e-65, Method: Compositional matrix adjust.
Identities = 126/210 (60%), Positives = 157/210 (74%), Gaps = 8/210 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +R+ LLKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSARRKVLLKVIILGDSGVGKTSLMNQYVNKKFTSQYKATIGADFLTKEVMVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVTNANTFKTLDSWRDEFLIQASPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + +R VP ++A WC + NIPY+ETSAKE N+D+AF +A AL E
Sbjct: 121 VVIGNKIDLE---NRQVPARRAQNWCESKNNIPYYETSAKEAVNVDQAFQKIARDALAKE 177
Query: 185 HKDIYYQPQGIS----ETVSEVEQRGGCAC 210
+ DI Y+PQ S S +Q+ G C
Sbjct: 178 NDDI-YKPQVASVPDIRLDSNTKQKSGKCC 206
>gi|169779179|ref|XP_001824054.1| Ras-related protein Rab7 [Aspergillus oryzae RIB40]
gi|46403855|gb|AAS92973.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|46403857|gb|AAS92974.1| vacuolar biogenesis protein [Aspergillus parasiticus]
gi|83772793|dbj|BAE62921.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|391874233|gb|EIT83154.1| Ras-related GTPase [Aspergillus oryzae 3.042]
Length = 205
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 155/206 (75%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + +R GCAC
Sbjct: 180 EAEEFSGEFSDPINIHLDSERDGCAC 205
>gi|225718862|gb|ACO15277.1| Ras-related protein Rab-7a [Caligus clemensi]
gi|225719168|gb|ACO15430.1| Ras-related protein Rab-7a [Caligus clemensi]
Length = 205
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDQLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDV +F SL++WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVTDTNSFSSLESWRDEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V K+A +WC + +PYFETSAKE N+++AFL +A+ AL E +D
Sbjct: 124 GNKVDLEN---RAVSSKRAQQWCHSKNEVPYFETSAKEAINVEQAFLTIAKNALAQESED 180
Query: 188 IY--YQPQGISETVSEVEQRGGCAC 210
+ + P+ I + S E+R C+C
Sbjct: 181 NFTDHFPEQIRLSNSVDEERSSCSC 205
>gi|154309394|ref|XP_001554031.1| GTPase Rab7 [Botryotinia fuckeliana B05.10]
gi|156058234|ref|XP_001595040.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980]
gi|154700916|gb|EDO00655.1| hypothetical protein SS1G_03128 [Sclerotinia sclerotiorum 1980
UF-70]
gi|347837376|emb|CCD51948.1| similar to ras-related protein rab-7a [Botryotinia fuckeliana]
Length = 205
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RV+ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRVISSKRAMTFCTSKGNIPYFETSAKEAINVEQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + R GCAC
Sbjct: 183 EYNGDYSDPINIHIENDRDGCAC 205
>gi|119478910|ref|XP_001259484.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
gi|119407638|gb|EAW17587.1| Rab small monomeric GTPase Rab7, putative [Neosartorya fischeri
NRRL 181]
Length = 205
Score = 253 bits (645), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFNGEFSDPINIHLDSDRDGCAC 205
>gi|320168875|gb|EFW45774.1| ras family protein [Capsaspora owczarzaki ATCC 30864]
Length = 206
Score = 252 bits (644), Expect = 5e-65, Method: Compositional matrix adjust.
Identities = 126/209 (60%), Positives = 155/209 (74%), Gaps = 6/209 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDKLVT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVL +DV KTFE+L +WR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLCFDVTTPKTFETLDSWRDEFLIQASPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A+ AL+ E
Sbjct: 121 VVLGNKIDLE---NRAVSDKRAKAWCGQKNNIPYFETSAKESINVEQAFQTIAKNALQQE 177
Query: 185 HKDIYYQ--PQGISETVSEV-EQRGGCAC 210
+ + Y P I T +GGC C
Sbjct: 178 SEAVLYNEFPDPIKITGDTAGGDKGGCGC 206
>gi|402218984|gb|EJT99059.1| hypothetical protein DACRYDRAFT_24137 [Dacryopinax sp. DJM-731 SS1]
Length = 202
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 120/175 (68%), Positives = 145/175 (82%), Gaps = 1/175 (0%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
K+D + S R V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ AL+ E
Sbjct: 123 KVDVE-ESKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNALQQE 176
>gi|50345016|ref|NP_001002178.1| ras-related protein rab-7-like [Danio rerio]
gi|49117792|gb|AAH72717.1| Zgc:91909 [Danio rerio]
gi|182888604|gb|AAI63969.1| Zgc:91909 protein [Danio rerio]
Length = 204
Score = 252 bits (644), Expect = 6e-65, Method: Compositional matrix adjust.
Identities = 127/204 (62%), Positives = 150/204 (73%), Gaps = 4/204 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPTTFKTLDSWRDEFLIQASTSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID D +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E D
Sbjct: 124 GNKIDLD---NRQVSTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQESVD 180
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P I G GC+C
Sbjct: 181 KYDFPDEIKLGNDRPMSNGEGCSC 204
>gi|226500938|ref|NP_001140557.1| uncharacterized protein LOC100272622 [Zea mays]
gi|194689390|gb|ACF78779.1| unknown [Zea mays]
gi|413949816|gb|AFW82465.1| hypothetical protein ZEAMMB73_831449 [Zea mays]
Length = 195
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 148/203 (72%), Gaps = 11/203 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQ
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQ--- 60
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
SLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 61 --------SLGVAFYRGADCCVLVYDVNSMKSFDNLHNWREEFLIQASPSDPDNFPFVLL 112
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N+++AF C+ + ALKNE ++
Sbjct: 113 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGTNVEDAFQCIVKNALKNEPEE 172
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 173 ELYVPDTVDVVGGNRAQRSSGCC 195
>gi|388581470|gb|EIM21778.1| hypothetical protein WALSEDRAFT_32360 [Wallemia sebi CBS 633.66]
Length = 208
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 127/205 (61%), Positives = 151/205 (73%), Gaps = 3/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VT+Q+WD
Sbjct: 5 KKTVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVVDDRVVTMQLWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + PFV+L
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFETLDSWRDEFLIQASPQDPVNFPFVVL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R V QKKA WC +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 125 GNKIDME-DSKRAVSQKKATSWCQSKGNIPYFETSAKEAINVEQAFQTIARNALVQEAEV 183
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I + GGC C
Sbjct: 184 ELYANYPDPIRIDQESSQSYGGCEC 208
>gi|357132968|ref|XP_003568100.1| PREDICTED: ras-related protein Rab7-like isoform 2 [Brachypodium
distachyon]
Length = 196
Score = 252 bits (643), Expect = 8e-65, Method: Compositional matrix adjust.
Identities = 122/188 (64%), Positives = 146/188 (77%), Gaps = 10/188 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQ+
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQV-- 61
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
SLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 62 --------SLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 113
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAK+ N++EAF C+ + ALKNE ++
Sbjct: 114 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKDGLNVEEAFQCIVKNALKNEPEE 173
Query: 188 IYYQPQGI 195
Y P +
Sbjct: 174 ELYVPDTV 181
>gi|405954307|gb|EKC21785.1| Ras-related protein Rab-7a [Crassostrea gigas]
gi|405961849|gb|EKC27591.1| Ras-related protein Rab-7a [Crassostrea gigas]
Length = 205
Score = 252 bits (643), Expect = 9e-65, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV + TF+SL +WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC +G IPYFETSAKE N+++AF VA+ AL E +
Sbjct: 124 GNKIDLE---NRAVTAKRAQSWCTSKGEIPYFETSAKEAINVEQAFQTVAKNALAQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T +Q GC C
Sbjct: 181 ELYNEFPDQIKLTNDTKKQESGCGC 205
>gi|71022857|ref|XP_761658.1| hypothetical protein UM05511.1 [Ustilago maydis 521]
gi|46101135|gb|EAK86368.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Ustilago maydis 521]
gi|343426390|emb|CBQ69920.1| probable GTPase Rab7 protein [Sporisorium reilianum SRZ2]
gi|388858528|emb|CCF47966.1| probable GTPase Rab7 protein [Ustilago hordei]
gi|443898215|dbj|GAC75552.1| NADH:ubiquinone oxidoreductase, NDUFV1/51kDa subunit [Pseudozyma
antarctica T-34]
Length = 205
Score = 251 bits (642), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS YKATIGADF+T+E+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSAYKATIGADFLTREVMVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC L YDVN K+FE+L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCCLCYDVNNAKSFETLDSWRDEFLIQAAPHDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R+V QK+A+ WC +GNIPYFETSAKE N+++AF +A AL+ E +
Sbjct: 124 GNKIDVE-ESKRMVSQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTIARAALQQEAEA 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + + Q+ GC C
Sbjct: 183 ELYADYPDPIRIDQDNQQSGCNC 205
>gi|121713784|ref|XP_001274503.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
gi|119402656|gb|EAW13077.1| Rab small monomeric GTPase Rab7, putative [Aspergillus clavatus
NRRL 1]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFNGEFSDPINIHLDSDRDGCAC 205
>gi|19113099|ref|NP_596307.1| GTPase Ypt7 [Schizosaccharomyces pombe 972h-]
gi|12230853|sp|O94655.1|YPT7_SCHPO RecName: Full=GTP-binding protein ypt7
gi|4490676|emb|CAB38603.1| GTPase Ypt7 [Schizosaccharomyces pombe]
Length = 205
Score = 251 bits (641), Expect = 1e-64, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+++LLKVI+LG+SGVGKTS+MNQYV KFS+ YKATIGADF+TKE+ +DDK+VTLQ+WD
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P E PF+LL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R+V + KAL +C RG IPYFETSAKE N+ EAF VA++AL+N D
Sbjct: 124 GNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSD 182
>gi|255954027|ref|XP_002567766.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589477|emb|CAP95622.1| Pc21g07250 [Penicillium chrysogenum Wisconsin 54-1255]
gi|336289865|gb|AEI31006.1| PcvA [Penicillium chrysogenum]
Length = 205
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGEFSDPINIHLDNDRDGCAC 205
>gi|145345429|ref|XP_001417213.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577440|gb|ABO95506.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 207
Score = 250 bits (639), Expect = 2e-64, Method: Compositional matrix adjust.
Identities = 125/204 (61%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKVI+LGDSGVGKTSLM QYV NKFS+QYKATIGADF+TKE+ +DD +VTLQIWDT
Sbjct: 4 RRTLLKVIILGDSGVGKTSLMAQYVNNKFSKQYKATIGADFMTKEIVIDDTVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG +FYRGADC + VYDVN K+FESL+NWR EFL QA P + E P V++G
Sbjct: 64 AGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPEKFPVVVVG 123
Query: 129 NKIDTDGG--SSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-- 184
NKID + G S RV+ +KKA WC +G + +FE SAKED N+D AF VA A++NE
Sbjct: 124 NKIDVEDGKDSKRVISEKKAKSWCTSKGGLMHFECSAKEDINVDAAFEAVARFAVQNEDA 183
Query: 185 HKDIYYQPQGISETVSEVEQRGGC 208
+D+Y P +S GC
Sbjct: 184 EEDVYL-PDTVSIDTRGAAPSSGC 206
>gi|443722950|gb|ELU11591.1| hypothetical protein CAPTEDRAFT_21782 [Capitella teleta]
Length = 205
Score = 250 bits (639), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV V TF++L +WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTVPNTFKTLDSWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V ++A +WC +G+IPYFETSAKE N+++AF VA+ AL E +
Sbjct: 124 GNKIDLE---NRAVSTRRAQQWCQTKGDIPYFETSAKEAINVEQAFQTVAKNALAQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I + + + + GC C
Sbjct: 181 ELYNEFPDQIKLSNDQNKPKDGCGC 205
>gi|225709764|gb|ACO10728.1| Ras-related protein Rab-7a [Caligus rogercresseyi]
Length = 208
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 122/209 (58%), Positives = 156/209 (74%), Gaps = 5/209 (2%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS +YKATIGADF+TKE+ +DD+LVT+
Sbjct: 3 SMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNRYKATIGADFLTKEVMVDDQLVTM 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERFQSLG AFYRGADCCVL YDV +F SL++WR+EFL QA P + E P
Sbjct: 63 QIWDTAGQERFQSLGVAFYRGADCCVLCYDVTDPTSFMSLESWRDEFLIQASPSDPENFP 122
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNK+D + R V K+A WC + +PYFETSAKE N+++AFL +A+ AL
Sbjct: 123 FVVLGNKVDLE---DRSVSSKRAQHWCHSKNEVPYFETSAKEAINVEQAFLTIAKNALAQ 179
Query: 184 EHKDIYYQ--PQGISETVSEVEQRGGCAC 210
E +D ++ P+ I + + E R CAC
Sbjct: 180 ETEDNFHDHFPEQIRLSNTVDEDRSSCAC 208
>gi|407922523|gb|EKG15620.1| Ras GTPase [Macrophomina phaseolina MS6]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RRKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKIDVE-ESKRMISTKRAMAFCNSKGGIPYFETSAKEAINVEQAFEVIARQALAQEEAG 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ Q + ++ + R GCAC
Sbjct: 183 DFNQDFPETIPINLDQDRDGCAC 205
>gi|296415700|ref|XP_002837524.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295633396|emb|CAZ81715.1| unnamed protein product [Tuber melanosporum]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 155/203 (76%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 KKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + ++ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ Q++A+ +C +G IPYFETSAKE N+++AF +A AL+ E D
Sbjct: 124 GNKIDVE-ESKRMISQRRAMAFCTSKGGIPYFETSAKEAINVEQAFEVIARNALQQEESD 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + ++ GCAC
Sbjct: 183 DFTGDFQDPINIHLDNEQSGCAC 205
>gi|452843439|gb|EME45374.1| hypothetical protein DOTSEDRAFT_71187 [Dothistroma septosporum
NZE10]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R + K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKVDVE-ESKRAISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESQ 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ Q P+ I + E++ GC+C
Sbjct: 183 DFNQDFPETIPINIG--EEQSGCSC 205
>gi|425772158|gb|EKV10572.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
Pd1]
gi|425777445|gb|EKV15619.1| Rab small monomeric GTPase Rab7, putative [Penicillium digitatum
PHI26]
Length = 205
Score = 250 bits (638), Expect = 3e-64, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPETFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRMISSKRAMTFCHSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGEFSDPINIHLDNDRDGCAC 205
>gi|260799919|ref|XP_002594905.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
gi|229280143|gb|EEN50916.1| hypothetical protein BRAFLDRAFT_289556 [Branchiostoma floridae]
Length = 205
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 152/205 (74%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV + TF+SL +WR+EFL QA P + E PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKSLDSWRDEFLIQASPRDPENFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V K+A W + + +IPYFE SAKE N+++AF +A+ AL E +
Sbjct: 124 GNKVDLD---NRAVSTKRASGWASSKNDIPYFEVSAKEAINVEQAFQTIAKNALAQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T ++ GCAC
Sbjct: 181 ELYNEFPDQIKLTNDAKQKNDGCAC 205
>gi|353238218|emb|CCA70171.1| probable GTPase Rab7 protein [Piriformospora indica DSM 11827]
Length = 203
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 122/183 (66%), Positives = 146/183 (79%), Gaps = 2/183 (1%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+Q+WDTA
Sbjct: 3 RVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVMVDDRLVTMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA+P E PFV+LGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQANPQNAENFPFVVLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + R V QK+A+ WC +G+IPYFETSAKE N+++AF +A+ AL E DI
Sbjct: 123 KIDVE-EHKRQVTQKRAMAWCQAKGSIPYFETSAKEAINVEQAFQTIAKNALLQE-TDID 180
Query: 190 YQP 192
P
Sbjct: 181 VSP 183
>gi|358055191|dbj|GAA98960.1| hypothetical protein E5Q_05648 [Mixia osmundae IAM 14324]
Length = 753
Score = 249 bits (637), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 143/177 (80%), Gaps = 1/177 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLK+I+LGDSGVGKTSLM Q+V +FS QYKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKIIILGDSGVGKTSLMGQFVNKRFSNQYKATIGADFLTKEVMIDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + + PF++L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFETLDSWRDEFLIQASPRDPDHFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + S RVV QKKA+ WC +G IPYFETSAKE N+++AF + AL E
Sbjct: 124 GNKIDME-DSKRVVSQKKAMTWCQAKGGIPYFETSAKEAINVEQAFQAACKGALAAE 179
>gi|326432764|gb|EGD78334.1| Rab7 GTPase [Salpingoeca sp. ATCC 50818]
Length = 206
Score = 249 bits (636), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 154/205 (75%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV V ++FESL+ WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTVPRSFESLEAWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D +R + + +A WC +GNIPYFETSAKE ++ AFL +A AL+ E +
Sbjct: 124 GNKVDL--KDNRAITENRAKSWCDEKGNIPYFETSAKEATKVETAFLTIARAALQQEKDE 181
Query: 188 IYYQPQGISETVSEV--EQRGGCAC 210
Y + + +V +++ GC C
Sbjct: 182 DIYHDFKDAVNLDDVPDKKQDGCGC 206
>gi|184186121|ref|NP_001116983.1| rab7 GTPase homolog SUrab7 [Strongylocentrotus purpuratus]
Length = 205
Score = 248 bits (634), Expect = 8e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+ VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRFVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F+SL +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTSPNSFKSLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R+V K++ WC + +IPYFETSAKE N+++AF +A+ AL E D
Sbjct: 124 GNKVDLD---NRIVSAKRSQSWCDSKNSIPYFETSAKESINVEQAFQTIAKNALAQEPDD 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
YQ P I + GCAC
Sbjct: 181 STYQDFPSQIKLDNDNKGKTEGCAC 205
>gi|57524756|ref|NP_001005591.1| uncharacterized protein LOC449549 [Danio rerio]
gi|51895902|gb|AAH82296.1| Zgc:100918 [Danio rerio]
Length = 205
Score = 248 bits (634), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 126/205 (61%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC + NIPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESEV 180
Query: 187 DIYYQPQGIS-ETVSEVEQRGGCAC 210
+ Y P I V GC+C
Sbjct: 181 ETYDFPDQIKLRDDRPVSSGDGCSC 205
>gi|134084262|emb|CAK47293.1| unnamed protein product [Aspergillus niger]
Length = 206
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 156/207 (75%), Gaps = 2/207 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQ 60
Query: 65 -IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ P
Sbjct: 61 AIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL
Sbjct: 121 FVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQ 179
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
E + + + +R GCAC
Sbjct: 180 EEAEEFSGEFSDPINIHLDGERDGCAC 206
>gi|440640707|gb|ELR10626.1| Ras-like protein Rab7 [Geomyces destructans 20631-21]
Length = 205
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ G + R GCAC
Sbjct: 183 EFSGDFGDPINIHMENDRDGCAC 205
>gi|398406058|ref|XP_003854495.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
gi|339474378|gb|EGP89471.1| ras-related protein-like protein [Zymoseptoria tritici IPO323]
Length = 205
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKVDVE-ESKRMISSKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESQ 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P I + E EQ GC+C
Sbjct: 183 DFDPDFPPTIPINIGENEQ--GCSC 205
>gi|449302434|gb|EMC98443.1| hypothetical protein BAUCODRAFT_23209 [Baudoinia compniacensis UAMH
10762]
Length = 205
Score = 248 bits (633), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 153/205 (74%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDTLDSWRDEFLIQASPMDPEGFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D G RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKVDV-GEDKRVISTKRAMAFCQAKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESQ 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + EQ GC+C
Sbjct: 183 DFNPDFPETIPINIG--EQNQGCSC 205
>gi|242763676|ref|XP_002340622.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
gi|218723818|gb|EED23235.1| Rab small monomeric GTPase Rab7, putative [Talaromyces stipitatus
ATCC 10500]
Length = 206
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 154/204 (75%), Gaps = 2/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R++ K+A+ +C +GN+PYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRMISSKRAMTFCQSKGNLPYFETSAKEALNVEQAFEVIARSALAQEESE 182
Query: 188 IYYQPQ-GISETVSEVEQRGGCAC 210
Y G + R GCAC
Sbjct: 183 EYGGGDFGDPINIRLDSDRDGCAC 206
>gi|328771241|gb|EGF81281.1| hypothetical protein BATDEDRAFT_87536 [Batrachochytrium
dendrobatidis JAM81]
Length = 209
Score = 248 bits (632), Expect = 1e-63, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 154/206 (74%), Gaps = 4/206 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+ LLKVI+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TKE+ ++++ VT+QIWD
Sbjct: 5 RRKVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKEVMVEERSVTMQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC LVYDVN K+F++L +WR+EFL QA+P + E PFV++
Sbjct: 65 TAGQERFQSLGVAFYRGADCCALVYDVNNVKSFDNLDSWRDEFLLQANPRDPENFPFVVI 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V QK+A+ WC +GNIPYFETSAKE N+++AF +A+ +LK E
Sbjct: 125 GNKVDVE-DSKRQVTQKRAMTWCQQKGNIPYFETSAKEGINVEQAFHTIAKNSLKQEADI 183
Query: 188 IYYQ---PQGISETVSEVEQRGGCAC 210
Y P I + GC C
Sbjct: 184 ELYSSDFPDPIKIDGDVTPKNAGCEC 209
>gi|295670409|ref|XP_002795752.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
gi|225684456|gb|EEH22740.1| GTP-binding protein yptV5 [Paracoccidioides brasiliensis Pb03]
gi|226284837|gb|EEH40403.1| GTP-binding protein ypt7 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 205
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/203 (60%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDSGVGKTSLMNQYV K+S YKATIGAD++TK++ +DD+LVTLQ+WD
Sbjct: 4 RKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDVE-ESKRMISPKRAATYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + R GCAC
Sbjct: 183 EYSGDFADPINIHLDNDRDGCAC 205
>gi|452985489|gb|EME85246.1| hypothetical protein MYCFIDRAFT_61188 [Pseudocercospora fijiensis
CIRAD86]
Length = 205
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 121/205 (59%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S+RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKVDRE-ESARVISSKRAMAFCQAKGGIPYFETSAKEAINVEQAFEVIARNALAQEESQ 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + +Q GC+C
Sbjct: 183 DFNPDFPETIPINIDNQDQ--GCSC 205
>gi|453085622|gb|EMF13665.1| hypothetical protein SEPMUDRAFT_148889 [Mycosphaerella populorum
SO2202]
Length = 205
Score = 248 bits (632), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 156/205 (76%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFSQ YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSQSYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPMDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R++ K+A +C +G IPYFETSAK+ N+++AF +A AL E
Sbjct: 124 GNKVDVE-ESKRMISTKRAQAFCQQKGGIPYFETSAKDAVNVEQAFEVIARNALAQEESQ 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + E EQ GC+C
Sbjct: 183 DFNGDFPETIPINIGENEQ--GCSC 205
>gi|209155660|gb|ACI34062.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 247 bits (631), Expect = 2e-63, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WCA + NIPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCASKNNIPYFETSAKEAINVDQAFQTIARNALKQESEV 180
Query: 187 DIYYQPQGIS-ETVSEVEQRGGCAC 210
+ Y P I GC+C
Sbjct: 181 ETYDFPDQIKLRDERPSSSSDGCSC 205
>gi|225706886|gb|ACO09289.1| Ras-related protein Rab-7 [Osmerus mordax]
Length = 205
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/179 (66%), Positives = 142/179 (79%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A WC + NIPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKSNIPYFETSAKEAINVDQAFQTIARNALKQESE 179
>gi|406867361|gb|EKD20399.1| ras-related protein-like protein [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 205
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + ++ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLIQASPRDPDSFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRVISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFSDPINIHIENDRDGCAC 205
>gi|358392434|gb|EHK41838.1| hypothetical protein TRIATDRAFT_312376 [Trichoderma atroviride IMI
206040]
Length = 206
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 150/207 (72%), Gaps = 4/207 (1%)
Query: 7 MKRRN---LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
M RN LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + P
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNKID + S RV+ K+A+ +C +G+IPYFETSAKE NID+AF +A AL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
E + Y + R GCAC
Sbjct: 180 EESEEYSGDFDDPINIHIDNDRDGCAC 206
>gi|60729663|pir||JC8006 Rab7 protein - sea anemone (Aiptasia pulchella)
gi|33621866|gb|AAQ23388.1| Rab7 [Aiptasia pulchella]
Length = 205
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 123/205 (60%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTQPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A+ AL E
Sbjct: 124 GNKIDLE---NRAVSAKRAQAWCHSKNNIPYFETSAKEAINVEQAFQTIAKNALAQETDV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I + ++ GCAC
Sbjct: 181 ELYNDFPDQIKLSGENKQKADGCAC 205
>gi|189199544|ref|XP_001936109.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|330921971|ref|XP_003299638.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
gi|187983208|gb|EDU48696.1| GTP-binding protein yptV5 [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|311326561|gb|EFQ92235.1| hypothetical protein PTT_10680 [Pyrenophora teres f. teres 0-1]
Length = 205
Score = 246 bits (629), Expect = 3e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQEDVG 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + E GGCAC
Sbjct: 183 DFSNDFPETIPIDLKGSE--GGCAC 205
>gi|317575785|ref|NP_001187403.1| ras-related protein rab-7a [Ictalurus punctatus]
gi|308322921|gb|ADO28598.1| ras-related protein rab-7a [Ictalurus punctatus]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 119/177 (67%), Positives = 142/177 (80%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV NKFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNNKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + +IPYFETSAKE N+D+AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNSIPYFETSAKEAINVDQAFQTIARNALKQE 177
>gi|261191069|ref|XP_002621943.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239590987|gb|EEQ73568.1| GTPase Rab7 [Ajellomyces dermatitidis SLH14081]
gi|239613100|gb|EEQ90087.1| GTPase Rab7 [Ajellomyces dermatitidis ER-3]
gi|327354859|gb|EGE83716.1| vacuolar biogenesis protein [Ajellomyces dermatitidis ATCC 18188]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDSGVGKTSLMNQYV K+S YKATIGAD++TK++ +DD+LVTLQ+WD
Sbjct: 4 RKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + R CAC
Sbjct: 183 EYSGDFADPINIHLDNDRDSCAC 205
>gi|340519278|gb|EGR49517.1| small GTPase of the Rab/Ypt family [Trichoderma reesei QM6a]
Length = 206
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 125/207 (60%), Positives = 150/207 (72%), Gaps = 4/207 (1%)
Query: 7 MKRRN---LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
M RN LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + P
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNKID + S RV+ K+A+ +C +G+IPYFETSAKE NID+AF +A AL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
E + Y + R GCAC
Sbjct: 180 EESEEYSGDFDDPINIHIDNDRDGCAC 206
>gi|223649382|gb|ACN11449.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 246 bits (628), Expect = 4e-63, Method: Compositional matrix adjust.
Identities = 118/179 (65%), Positives = 143/179 (79%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A WCA + +IPYFETSAKE N+D+AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCASKSSIPYFETSAKEAINVDQAFQTIARNALKQESE 179
>gi|209150114|gb|ACI33008.1| Ras-related protein Rab-7a [Salmo salar]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 124/205 (60%), Positives = 150/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A WC +G+IPYFETSAKE N+D+AF + ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCTSKGSIPYFETSAKEAINVDQAFQTICRNALKQESEV 180
Query: 187 DIYYQPQGIS-ETVSEVEQRGGCAC 210
+ Y P I GC+C
Sbjct: 181 ETYDFPDQIKLRDDRPASSSDGCSC 205
>gi|451851944|gb|EMD65242.1| hypothetical protein COCSADRAFT_36566 [Cochliobolus sativus ND90Pr]
gi|451995245|gb|EMD87713.1| hypothetical protein COCHEDRAFT_1023128 [Cochliobolus
heterostrophus C5]
Length = 205
Score = 246 bits (627), Expect = 5e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKIDVE-ESKRMISSKRAMAFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQEDVG 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + E GGCAC
Sbjct: 183 DFSNDFPETIPIDLKGNE--GGCAC 205
>gi|212529382|ref|XP_002144848.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
gi|210074246|gb|EEA28333.1| Rab small monomeric GTPase Rab7, putative [Talaromyces marneffei
ATCC 18224]
Length = 206
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 120/204 (58%), Positives = 154/204 (75%), Gaps = 2/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R++ K+A+ +C +G++PYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ENKRMISSKRAMTFCQSKGSLPYFETSAKEALNVEQAFEVIARSALAQEESE 182
Query: 188 IYYQPQ-GISETVSEVEQRGGCAC 210
Y G + R GCAC
Sbjct: 183 EYGGGDFGDPINIRLDSDRDGCAC 206
>gi|169613615|ref|XP_001800224.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
gi|111061153|gb|EAT82273.1| hypothetical protein SNOG_09938 [Phaeosphaeria nodorum SN15]
Length = 205
Score = 246 bits (627), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARQALAQEDVA 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + E GGCAC
Sbjct: 183 DFNNDFPETIPIDLKGNE--GGCAC 205
>gi|225561783|gb|EEH10063.1| GTPase Rab7 [Ajellomyces capsulatus G186AR]
Length = 205
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDSGVGKTSLMNQYV K+S YKATIGAD++TK++ +DD+LVTLQ+WD
Sbjct: 4 RKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + R CAC
Sbjct: 183 EYGGDFADPINIHLDNDRDNCAC 205
>gi|46121525|ref|XP_385317.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Gibberella zeae PH-1]
gi|302911601|ref|XP_003050527.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256731464|gb|EEU44814.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|342879328|gb|EGU80581.1| hypothetical protein FOXB_08912 [Fusarium oxysporum Fo5176]
gi|408394017|gb|EKJ73273.1| hypothetical protein FPSE_06538 [Fusarium pseudograminearum CS3096]
Length = 205
Score = 245 bits (626), Expect = 6e-63, Method: Compositional matrix adjust.
Identities = 121/203 (59%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G+IPYFETSAKE NID+AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFDDPINIHIENDRDGCAC 205
>gi|409083334|gb|EKM83691.1| hypothetical protein AGABI1DRAFT_110327 [Agaricus bisporus var.
burnettii JB137-S8]
gi|426201612|gb|EKV51535.1| hypothetical protein AGABI2DRAFT_189775 [Agaricus bisporus var.
bisporus H97]
Length = 203
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 149/190 (78%), Gaps = 4/190 (2%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LKV++LGDSGVGKTSLMNQYV +F+ QYKATIGADF+TKE+ +DDK T+Q+WDTA
Sbjct: 3 RVCLKVVILGDSGVGKTSLMNQYVNKRFNTQYKATIGADFLTKEVVVDDKAATMQLWDTA 62
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFVLLGN
Sbjct: 63 GQERFQSLGVAFYRGADCCVLVYDVNNTKSFDALDSWRDEFLIQASPQDPDNFPFVLLGN 122
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + G +R V QK+A+ WC +GNIPYFETSAK+ N+++AF+ VA+I L +D
Sbjct: 123 KIDVEEG-NRPVSQKRAMAWCQSKGNIPYFETSAKDAINVEQAFVTVAKIGL---QQDAE 178
Query: 190 YQPQGISETV 199
P+ SE +
Sbjct: 179 LTPEEFSECI 188
>gi|449448034|ref|XP_004141771.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 245 bits (626), Expect = 7e-63, Method: Compositional matrix adjust.
Identities = 125/203 (61%), Positives = 145/203 (71%), Gaps = 24/203 (11%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMN QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQIWD 56
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL Q
Sbjct: 57 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ-------------- 102
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKNE ++
Sbjct: 103 ---VDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNEPEE 159
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I ++ GC C
Sbjct: 160 EVYLPDTIDVAGGRQQRSTGCEC 182
>gi|240275387|gb|EER38901.1| vacuolar biogenesis protein [Ajellomyces capsulatus H143]
gi|325091228|gb|EGC44538.1| vacuolar biogenesis protein [Ajellomyces capsulatus H88]
Length = 317
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 121/208 (58%), Positives = 154/208 (74%), Gaps = 1/208 (0%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+ + +++ LLKVIVLGDSGVGKTSLMNQYV K+S YKATIGAD++TK++ +DD+LVT
Sbjct: 111 LDMATRKKLLLKVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVT 170
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQ+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+
Sbjct: 171 LQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPRDPESF 230
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
PFV+LGNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL
Sbjct: 231 PFVVLGNKIDVE-ESKRMISSKRATTYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALA 289
Query: 183 NEHKDIYYQPQGISETVSEVEQRGGCAC 210
E + Y + R CAC
Sbjct: 290 QEESEEYGGDFADPINIHLDNDRDNCAC 317
>gi|213407064|ref|XP_002174303.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
gi|212002350|gb|EEB08010.1| GTPase Ypt7 [Schizosaccharomyces japonicus yFS275]
Length = 205
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 119/204 (58%), Positives = 152/204 (74%), Gaps = 1/204 (0%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++++ LLKVI+LG+SGVGKTSLMNQ+V KFS+ YKATIGADF+TKE+ +DDK+VTLQIW
Sbjct: 3 IRKKLLLKVIILGESGVGKTSLMNQFVNRKFSKDYKATIGADFLTKEVVVDDKIVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDVN K++ESL +WR+EFL QA P E PF+L
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSYESLDSWRDEFLIQASPNNPETFPFIL 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNK+D + R+V + KAL +C +G+IPY+ETSAK+ N+ EAF VA +AL N +
Sbjct: 123 IGNKVDVE-EQKRMVSKAKALAFCQAKGDIPYYETSAKDAINVQEAFEAVARLALANADE 181
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
D + Q+ C+C
Sbjct: 182 DDVTNDFTDPVHLELETQKASCSC 205
>gi|396475893|ref|XP_003839885.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
gi|312216456|emb|CBX96406.1| similar to ras-related protein Rab-7a [Leptosphaeria maculans JN3]
Length = 205
Score = 245 bits (625), Expect = 9e-63, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 155/205 (75%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + E+ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDTLDSWRDEFLVQASPMDPESFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKIDVE-ESKRMISSKRAMTFCQSKGGIPYFETSAKEAINVEDAFEVIARQALAQEDVG 182
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
+ P+ I + E GGCAC
Sbjct: 183 DFGNDFPETIPIDLKGNE--GGCAC 205
>gi|119174482|ref|XP_001239602.1| conserved hypothetical protein [Coccidioides immitis RS]
gi|303314345|ref|XP_003067181.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|240106849|gb|EER25036.1| Ras-related protein Rab7, putative [Coccidioides posadasii C735
delta SOWgp]
gi|320037457|gb|EFW19394.1| vacuolar biogenesis protein [Coccidioides posadasii str. Silveira]
gi|392869802|gb|EAS28327.2| small GTP-binding protein [Coccidioides immitis RS]
Length = 205
Score = 245 bits (625), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 153/203 (75%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV K+S YKATIGAD++TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQACPRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D S R++ K+A +C +GNIPYFETSAKE N+++AF +A++AL E +
Sbjct: 124 GNKVDVD-ESKRMISTKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKVALTQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R CAC
Sbjct: 183 EFNGDFTDPINIHLDNDRDTCAC 205
>gi|358388492|gb|EHK26085.1| ras-related small GTPase [Trichoderma virens Gv29-8]
Length = 206
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 124/207 (59%), Positives = 149/207 (71%), Gaps = 4/207 (1%)
Query: 7 MKRRN---LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
M RN LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+
Sbjct: 1 MSSRNKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + P
Sbjct: 61 QLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPPNFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNKID + S RV+ K+A+ +C +G+IPYFETSAKE NID+AF +A AL
Sbjct: 121 FVVLGNKIDVE-ESKRVISTKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQ 179
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
E + Y + R GC C
Sbjct: 180 EESEEYSGDFDDPINIHIDNDRDGCPC 206
>gi|296474622|tpg|DAA16737.1| TPA: ras-related protein Rab-7a [Bos taurus]
gi|440895046|gb|ELR47337.1| Ras-related protein Rab-7a [Bos grunniens mutus]
Length = 207
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>gi|383858778|ref|XP_003704876.1| PREDICTED: ras-related protein Rab-7a-like [Megachile rotundata]
Length = 207
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 154/207 (74%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF++KE+++DD++VT+QIWD
Sbjct: 4 RKKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLSKEVRVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDQDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + SR V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQAIAKNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 181 ELYNEFPDQIKLTNDQRSNGKGDSCAC 207
>gi|224066111|ref|XP_002198172.1| PREDICTED: ras-related protein Rab-7a [Taeniopygia guttata]
Length = 207
Score = 244 bits (624), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + +T C+C
Sbjct: 181 ELYNEFPEPIKLDKTDRAKASAESCSC 207
>gi|115387465|ref|XP_001211238.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
gi|114195322|gb|EAU37022.1| GTP-binding protein ypt7 [Aspergillus terreus NIH2624]
Length = 280
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 123/226 (54%), Positives = 156/226 (69%), Gaps = 20/226 (8%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT- 62
+++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+LVT
Sbjct: 56 AMSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRLVTM 115
Query: 63 ------------------LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQ 104
LQIWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L
Sbjct: 116 QARPQMTRPVMYPRLIHDLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALD 175
Query: 105 NWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAK 164
+WR+EFL QA P + E+ PFV++GNKID + S R++ K+A+ +C +GNIPYFETSAK
Sbjct: 176 SWRDEFLIQASPRDPESFPFVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAK 234
Query: 165 EDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
E N+++AF +A AL E + + + R GCAC
Sbjct: 235 EAVNVEQAFEVIARSALAQEEAEEFSGEFSDPINIHLDSDRDGCAC 280
>gi|51247925|pdb|1VG1|A Chain A, Gdp-bound Rab7
gi|51247931|pdb|1VG9|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247933|pdb|1VG9|D Chain D, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247935|pdb|1VG9|F Chain F, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
gi|51247937|pdb|1VG9|H Chain H, The Crystal Structures Of The Rep-1 Protein In Complex
With C-Terminally Truncated Rab7 Protein
Length = 185
Score = 244 bits (623), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|85103291|ref|XP_961487.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336274761|ref|XP_003352134.1| hypothetical protein SMAC_02569 [Sordaria macrospora k-hell]
gi|30580489|sp|Q9C2L8.1|RAB7_NEUCR RecName: Full=Probable Ras-related protein Rab7
gi|12718294|emb|CAC28856.1| probable GTPase Rab7 protein [Neurospora crassa]
gi|28923033|gb|EAA32251.1| GTP-binding protein YPTC5 [Neurospora crassa OR74A]
gi|336473057|gb|EGO61217.1| hypothetical protein NEUTE1DRAFT_116033 [Neurospora tetrasperma
FGSC 2508]
gi|350293695|gb|EGZ74780.1| putative ras-related protein Rab7 [Neurospora tetrasperma FGSC
2509]
gi|380092213|emb|CCC09989.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 205
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 151/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDRDGCAC 205
>gi|432860022|ref|XP_004069352.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Oryzias
latipes]
gi|432860024|ref|XP_004069353.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Oryzias
latipes]
Length = 206
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|410919497|ref|XP_003973221.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|47229587|emb|CAG06783.1| unnamed protein product [Tetraodon nigroviridis]
Length = 207
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|156543352|ref|XP_001607917.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Nasonia
vitripennis]
gi|156543354|ref|XP_001607924.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Nasonia
vitripennis]
Length = 207
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVAAPSTFKSLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + +R V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E++
Sbjct: 124 GNKVDLE---NRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQENEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 181 ELYNEFPDQIKLTSDQRNNGKGDSCAC 207
>gi|41055538|ref|NP_957222.1| ras-related protein Rab-7a [Danio rerio]
gi|32451664|gb|AAH54602.1| RAB7, member RAS oncogene family [Danio rerio]
gi|160774333|gb|AAI55203.1| Rab7 protein [Danio rerio]
Length = 207
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|348510369|ref|XP_003442718.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
gi|410920241|ref|XP_003973592.1| PREDICTED: ras-related protein Rab-7a-like [Takifugu rubripes]
gi|317419023|emb|CBN81061.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
gi|380706269|gb|AFD97434.1| Rab7 GTPase [Epinephelus coioides]
Length = 207
Score = 244 bits (622), Expect = 2e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|432857138|ref|XP_004068548.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|13027392|ref|NP_076440.1| ras-related protein Rab-7a [Rattus norvegicus]
gi|1710001|sp|P09527.2|RAB7A_RAT RecName: Full=Ras-related protein Rab-7a; AltName: Full=Ras-related
protein BRL-RAS; AltName: Full=Ras-related protein p23
gi|51247924|pdb|1VG0|B Chain B, The Crystal Structures Of The Rep-1 Protein In Complex
With Monoprenylated Rab7 Protein
gi|51247926|pdb|1VG8|A Chain A, Gppnhp-Bound Rab7
gi|51247927|pdb|1VG8|B Chain B, Gppnhp-Bound Rab7
gi|51247928|pdb|1VG8|C Chain C, Gppnhp-Bound Rab7
gi|51247929|pdb|1VG8|D Chain D, Gppnhp-Bound Rab7
gi|9837359|gb|AAG00543.1|AF286535_1 GTP-binding protein RAB7 [Rattus norvegicus]
gi|505565|emb|CAA31053.1| unnamed protein product [Rattus rattus]
gi|47938948|gb|AAH72470.1| RAB7A, member RAS oncogene family [Rattus norvegicus]
gi|71891601|dbj|BAE16999.1| RAB7 [Rattus norvegicus]
gi|71891603|dbj|BAE17000.1| RAB7 [Rattus norvegicus]
gi|149036684|gb|EDL91302.1| RAB7, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P+ I +E + +C
Sbjct: 181 ELYNEFPEPIKLDKNERAKASAESC 205
>gi|197098410|ref|NP_001127416.1| ras-related protein Rab-7a [Pongo abelii]
gi|75070701|sp|Q5R9Y4.1|RAB7A_PONAB RecName: Full=Ras-related protein Rab-7a
gi|55729388|emb|CAH91426.1| hypothetical protein [Pongo abelii]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|50979156|ref|NP_001003316.1| ras-related protein Rab-7a [Canis lupus familiaris]
gi|131797|sp|P18067.1|RAB7A_CANFA RecName: Full=Ras-related protein Rab-7a
gi|164058|gb|AAA30890.1| GTP-binding protein (rab7) [Canis lupus familiaris]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|242004078|ref|XP_002422965.1| rab9 and, putative [Pediculus humanus corporis]
gi|212505881|gb|EEB10227.1| rab9 and, putative [Pediculus humanus corporis]
Length = 206
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 155/206 (75%), Gaps = 6/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTS+MNQYV NKFS QYKATIGADF+T+++ + D+ VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSIMNQYVNNKFSNQYKATIGADFLTRDVDVGDRRVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ T++SL+NWR+EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVSAPTTYKSLENWRDEFLIQASPRDPDNFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A +WC + NIPYFETSAKE NI++AF +A+ AL E +
Sbjct: 124 GNKIDVE---NRSVSTKRAQQWCQSKNNIPYFETSAKEGINIEQAFQTIAKNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG-CAC 210
Y P I + E +GG C+C
Sbjct: 181 ELYNEFPDQIKLSGDNRESKGGSCSC 206
>gi|308802790|ref|XP_003078708.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
gi|116057161|emb|CAL51588.1| possible apospory-associated protein (ISS) [Ostreococcus tauri]
Length = 209
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 151/207 (72%), Gaps = 5/207 (2%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
+ + R LLKVI+LGDSGVGKTSLM+QYV NKFS+QYKATIGADF+TKE+ +DD +VTLQI
Sbjct: 3 DARARTLLKVIILGDSGVGKTSLMSQYVNNKFSKQYKATIGADFMTKEITVDDTVVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG +FYRGADC + VYDVN K+FESL+NWR EFL QA P + + P V
Sbjct: 63 WDTAGQERFQSLGVSFYRGADCVMCVYDVNSAKSFESLENWRNEFLVQASPSDPDKFPIV 122
Query: 126 LLGNKIDTDGG--SSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
++GNKID + G S RV+ +KKA WC +G + +FE SAKED N+ AF VA A+++
Sbjct: 123 VVGNKIDVEEGKESKRVISEKKAKSWCTSKGGLMHFECSAKEDINVTAAFEAVARFAVES 182
Query: 184 E--HKDIYYQPQGISETVSEVEQRGGC 208
E D++ P + Q GGC
Sbjct: 183 EDTEPDVFL-PDVVQIDAGPKAQSGGC 208
>gi|354482839|ref|XP_003503603.1| PREDICTED: ras-related protein Rab-7a-like [Cricetulus griseus]
gi|344253367|gb|EGW09471.1| Ras-related protein Rab-7a [Cricetulus griseus]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|34147513|ref|NP_004628.4| ras-related protein Rab-7a [Homo sapiens]
gi|148747526|ref|NP_033031.2| ras-related protein Rab-7a [Mus musculus]
gi|126336249|ref|XP_001366922.1| PREDICTED: ras-related protein Rab-7a-like [Monodelphis domestica]
gi|296225983|ref|XP_002758722.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Callithrix
jacchus]
gi|296225985|ref|XP_002758723.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Callithrix
jacchus]
gi|301764537|ref|XP_002917684.1| PREDICTED: ras-related protein Rab-7a-like [Ailuropoda melanoleuca]
gi|332261783|ref|XP_003279946.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Nomascus
leucogenys]
gi|332817831|ref|XP_526302.3| PREDICTED: ras-related protein Rab-7a isoform 3 [Pan troglodytes]
gi|395516722|ref|XP_003762536.1| PREDICTED: ras-related protein Rab-7a [Sarcophilus harrisii]
gi|395847153|ref|XP_003796248.1| PREDICTED: ras-related protein Rab-7a [Otolemur garnettii]
gi|397518563|ref|XP_003829454.1| PREDICTED: ras-related protein Rab-7a [Pan paniscus]
gi|403268248|ref|XP_003926190.1| PREDICTED: ras-related protein Rab-7a [Saimiri boliviensis
boliviensis]
gi|410037454|ref|XP_003950229.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Pan troglodytes]
gi|410037456|ref|XP_003950230.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Pan troglodytes]
gi|410951826|ref|XP_003982594.1| PREDICTED: ras-related protein Rab-7a-like [Felis catus]
gi|426342010|ref|XP_004036309.1| PREDICTED: ras-related protein Rab-7a-like [Gorilla gorilla
gorilla]
gi|441665150|ref|XP_004091796.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Nomascus
leucogenys]
gi|1709999|sp|P51149.1|RAB7A_HUMAN RecName: Full=Ras-related protein Rab-7a
gi|46397834|sp|P51150.2|RAB7A_MOUSE RecName: Full=Ras-related protein Rab-7a
gi|20379060|gb|AAM21090.1|AF498942_1 small GTP binding protein RAB7 [Homo sapiens]
gi|1089893|emb|CAA63763.1| RAB7 protein [Homo sapiens]
gi|12836622|dbj|BAB23738.1| unnamed protein product [Mus musculus]
gi|13435456|gb|AAH04597.1| RAB7, member RAS oncogene family [Mus musculus]
gi|33870783|gb|AAH08721.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|56269740|gb|AAH86793.1| RAB7, member RAS oncogene family [Mus musculus]
gi|60688670|gb|AAH13728.2| RAB7A, member RAS oncogene family [Homo sapiens]
gi|71060033|emb|CAJ18560.1| Rab7 [Mus musculus]
gi|74143376|dbj|BAE24180.1| unnamed protein product [Mus musculus]
gi|74178374|dbj|BAE32452.1| unnamed protein product [Mus musculus]
gi|74185227|dbj|BAE30093.1| unnamed protein product [Mus musculus]
gi|74186523|dbj|BAE34750.1| unnamed protein product [Mus musculus]
gi|74195255|dbj|BAE28355.1| unnamed protein product [Mus musculus]
gi|74213341|dbj|BAE35490.1| unnamed protein product [Mus musculus]
gi|74220348|dbj|BAE31401.1| unnamed protein product [Mus musculus]
gi|112292967|dbj|BAF02861.1| Rab7 [Mus musculus]
gi|119599708|gb|EAW79302.1| RAB7, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148666823|gb|EDK99239.1| mCG130610 [Mus musculus]
gi|168277952|dbj|BAG10954.1| Ras-related protein Rab-7a [synthetic construct]
gi|355564540|gb|EHH21040.1| hypothetical protein EGK_04016 [Macaca mulatta]
gi|355786382|gb|EHH66565.1| hypothetical protein EGM_03582 [Macaca fascicularis]
gi|380785041|gb|AFE64396.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380785043|gb|AFE64397.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816414|gb|AFE80081.1| ras-related protein Rab-7a [Macaca mulatta]
gi|380816416|gb|AFE80082.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410517|gb|AFH28472.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383410519|gb|AFH28473.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421483|gb|AFH33955.1| ras-related protein Rab-7a [Macaca mulatta]
gi|383421485|gb|AFH33956.1| ras-related protein Rab-7a [Macaca mulatta]
gi|384949354|gb|AFI38282.1| ras-related protein Rab-7a [Macaca mulatta]
gi|410226154|gb|JAA10296.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|410226162|gb|JAA10300.1| RAB7A, member RAS oncogene family [Pan troglodytes]
gi|417397111|gb|JAA45589.1| Putative ras-related protein rab-7a [Desmodus rotundus]
gi|431913713|gb|ELK15203.1| Ras-related protein Rab-7a [Pteropus alecto]
gi|432103477|gb|ELK30581.1| Ras-related protein Rab-7a [Myotis davidii]
gi|444512838|gb|ELV10180.1| Ras-related protein Rab-7a [Tupaia chinensis]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|1050551|emb|CAA61797.1| rab7 [Mus musculus]
Length = 207
Score = 243 bits (621), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYRKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|50754381|ref|XP_414359.1| PREDICTED: ras-related protein Rab-7a isoform 2 [Gallus gallus]
gi|326927938|ref|XP_003210144.1| PREDICTED: ras-related protein Rab-7a-like [Meleagris gallopavo]
gi|363738555|ref|XP_003642026.1| PREDICTED: ras-related protein Rab-7a isoform 1 [Gallus gallus]
gi|449276664|gb|EMC85096.1| Ras-related protein Rab-7a [Columba livia]
Length = 207
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|327265951|ref|XP_003217771.1| PREDICTED: ras-related protein Rab-7a-like [Anolis carolinensis]
gi|387017942|gb|AFJ51089.1| ras-related protein Rab-7a-like [Crotalus adamanteus]
Length = 207
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|348551446|ref|XP_003461541.1| PREDICTED: ras-related protein Rab-7a-like [Cavia porcellus]
Length = 207
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|187607630|ref|NP_001119836.1| ras-related protein Rab-7a [Ovis aries]
gi|184191121|gb|ACC76773.1| RAS oncogene family-like 7A [Ovis aries]
gi|385281368|gb|AFI57836.1| ras-related protein Rab-7A [Capra hircus]
Length = 207
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|149728225|ref|XP_001488351.1| PREDICTED: ras-related protein Rab-7a-like [Equus caballus]
Length = 207
Score = 243 bits (620), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 122/207 (58%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRAKAPGEGCSC 207
>gi|344275957|ref|XP_003409777.1| PREDICTED: ras-related protein Rab-7a-like [Loxodonta africana]
Length = 207
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 123/207 (59%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y P+ I ++ + G C+C
Sbjct: 181 ELYNEFPEPIKLDKNDRAKPPGETCSC 207
>gi|116206514|ref|XP_001229066.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
gi|88183147|gb|EAQ90615.1| hypothetical protein CHGG_02550 [Chaetomium globosum CBS 148.51]
Length = 205
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRRVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDRDGCAC 205
>gi|348507922|ref|XP_003441504.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 207
Score = 243 bits (620), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|1174149|gb|AAA86640.1| small GTP binding protein Rab7 [Homo sapiens]
Length = 207
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLVQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKVDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|449491740|ref|XP_004158990.1| PREDICTED: ras-related protein RABG3d-like isoform 2 [Cucumis
sativus]
Length = 182
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 124/203 (61%), Positives = 144/203 (70%), Gaps = 24/203 (11%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMN QYKATIGADF+TKE+Q+DD+L TLQIWD
Sbjct: 4 RRRILLKVIILGDSGVGKTSLMNH-------NQYKATIGADFLTKEVQLDDRLFTLQIWD 56
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL Q
Sbjct: 57 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQ-------------- 102
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A+ ALKN ++
Sbjct: 103 ---VDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGLNVDAAFQCIAKNALKNGPEE 159
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I ++ GC C
Sbjct: 160 EVYLPDTIDVAGGRQQRSTGCEC 182
>gi|284794146|pdb|3LAW|A Chain A, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794147|pdb|3LAW|B Chain B, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794148|pdb|3LAW|C Chain C, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794149|pdb|3LAW|D Chain D, Structure Of Gtp-Bound L129f Mutant Rab7
gi|284794150|pdb|3LAW|E Chain E, Structure Of Gtp-Bound L129f Mutant Rab7
Length = 207
Score = 243 bits (619), Expect = 4e-62, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDFE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|78045539|ref|NP_001030253.1| ras-related protein Rab-7a [Bos taurus]
gi|108860919|sp|Q3T0F5.1|RAB7A_BOVIN RecName: Full=Ras-related protein Rab-7a
gi|74354082|gb|AAI02416.1| RAB7A, member RAS oncogene family [Bos taurus]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 150/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF + ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>gi|302416853|ref|XP_003006258.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|261355674|gb|EEY18102.1| GTP-binding protein ypt7 [Verticillium albo-atrum VaMs.102]
gi|346974303|gb|EGY17755.1| GTP-binding protein YPTC5 [Verticillium dahliae VdLs.17]
Length = 205
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 153/206 (74%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q
Sbjct: 1 MSTRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + + R GCAC
Sbjct: 180 ESEEFSGDFQDPINIHIGDDRDGCAC 205
>gi|222619160|gb|EEE55292.1| hypothetical protein OsJ_03242 [Oryza sativa Japonica Group]
Length = 538
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 110/154 (71%), Positives = 133/154 (86%)
Query: 31 QYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVL 90
+YV+ KFSQQYKATIGADFVTKE+ ++D+LVTLQIWDTAGQERFQSLG AFYRGADCCVL
Sbjct: 380 RYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVL 439
Query: 91 VYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWC 150
VYDVN ++F++L W +EFL QA P + + PF+LLGNKID DGG SRVV +KKA+EWC
Sbjct: 440 VYDVNSNRSFDTLNTWHDEFLNQASPSDPKTFPFILLGNKIDVDGGKSRVVSEKKAMEWC 499
Query: 151 AYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+ +GNIPYFETSAKED N+D AFL VA++AL++E
Sbjct: 500 SSKGNIPYFETSAKEDRNVDSAFLSVAKLALEHE 533
>gi|148223285|ref|NP_001087006.1| RAB7, member RAS oncogene family [Xenopus laevis]
gi|50414980|gb|AAH77884.1| Rab7-prov protein [Xenopus laevis]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKVDLE---NRQVTTKRAHVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|56118925|ref|NP_001008026.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|147905326|ref|NP_001083352.1| RAB7A, member RAS oncogene family [Xenopus laevis]
gi|38014729|gb|AAH60401.1| MGC68523 protein [Xenopus laevis]
gi|51704077|gb|AAH80905.1| RAB7A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89267364|emb|CAJ82793.1| rab7,member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKVDLE---NRQVTTKRAQVWCHSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|4105819|gb|AAD02565.1| Rab7 [Homo sapiens]
Length = 207
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/190 (62%), Positives = 146/190 (76%), Gaps = 5/190 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+ KE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLIKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E ++
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEE 180
Query: 188 IYYQ--PQGI 195
Y P+ I
Sbjct: 181 ELYNEFPEPI 190
>gi|340904912|gb|EGS17280.1| rab small monomeric GTPase-like protein [Chaetomium thermophilum
var. thermophilum DSM 1495]
Length = 205
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVN K+F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFDALDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A +C +G IPYFETSAKE N++EAF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAQTFCQSKGGIPYFETSAKEAINVEEAFQVIARNALMQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + +R GCAC
Sbjct: 183 EFSGDFQDPINIHIENERDGCAC 205
>gi|67515615|ref|XP_657693.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
gi|40746111|gb|EAA65267.1| RAB7_NEUCR Probable Ras-related protein Rab7 [Aspergillus nidulans
FGSC A4]
Length = 201
Score = 243 bits (619), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 153/206 (74%), Gaps = 5/206 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ +LKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+L
Sbjct: 1 MSSRKKVMLKVIILGDSGVGKTSLMNQYVNKKFSGSYKATIGADFLTKEVLVDDRL---- 56
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PF
Sbjct: 57 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPF 116
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E
Sbjct: 117 VVIGNKIDME-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQE 175
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ Y + + +R GCAC
Sbjct: 176 EAEEYGGDYTDPINIHDTTERDGCAC 201
>gi|315044527|ref|XP_003171639.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|327297278|ref|XP_003233333.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|311343982|gb|EFR03185.1| GTP-binding protein ypt7 [Arthroderma gypseum CBS 118893]
gi|326464639|gb|EGD90092.1| vacuolar biogenesis protein [Trichophyton rubrum CBS 118892]
gi|326472371|gb|EGD96380.1| vacuolar biogenesis protein [Trichophyton tonsurans CBS 112818]
gi|326481596|gb|EGE05606.1| vacuolar biogenesis protein [Trichophyton equinum CBS 127.97]
Length = 205
Score = 242 bits (618), Expect = 5e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV K+S YKATIGAD++TKE+ +D +LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA+ + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALMQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ V+ R CAC
Sbjct: 183 EFNGDFDDVINVNHDSDRDACAC 205
>gi|226294109|gb|EEH49529.1| GTP-binding protein ypt7 [Paracoccidioides brasiliensis Pb18]
Length = 226
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 120/199 (60%), Positives = 148/199 (74%), Gaps = 1/199 (0%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L VIVLGDSGVGKTSLMNQYV K+S YKATIGAD++TK++ +DD+LVTLQ+WDTAGQ
Sbjct: 29 LFPVIVLGDSGVGKTSLMNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWDTAGQ 88
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+LGNKI
Sbjct: 89 ERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLVQASPRDPESFPFVVLGNKI 148
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E + Y
Sbjct: 149 DVE-ESKRMISPKRAATYCQSKGNIPYFETSAKEAINVEQAFEEIAKSALVQEESEEYSG 207
Query: 192 PQGISETVSEVEQRGGCAC 210
+ R GCAC
Sbjct: 208 DFADPINIHLDNDRDGCAC 226
>gi|321465562|gb|EFX76562.1| hypothetical protein DAPPUDRAFT_231190 [Daphnia pulex]
Length = 208
Score = 242 bits (618), Expect = 6e-62, Method: Compositional matrix adjust.
Identities = 124/210 (59%), Positives = 156/210 (74%), Gaps = 12/210 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RRKILLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F+ L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNK+D + +R V K+A +WC + +IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKVDLE---NRAVSTKRAQQWCHAKNDIPYFETSAKEGINVEQAFQTIARNALAQETQV 180
Query: 187 DIYYQ-PQGISETVSEVEQRG-----GCAC 210
D+Y + P+ I T +QRG C+C
Sbjct: 181 DLYNEFPEQIKLTPG--DQRGNGRQDSCSC 208
>gi|149036685|gb|EDL91303.1| RAB7, member RAS oncogene family, isoform CRA_b [Rattus norvegicus]
Length = 206
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/175 (66%), Positives = 140/175 (80%), Gaps = 3/175 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALK 175
>gi|403416095|emb|CCM02795.1| predicted protein [Fibroporia radiculosa]
Length = 265
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 119/181 (65%), Positives = 144/181 (79%), Gaps = 5/181 (2%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD+L +WDTA
Sbjct: 69 RVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVMVDDRL----LWDTA 124
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV+LGN
Sbjct: 125 GQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSWRDEFLIQASPHDPENFPFVVLGN 184
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
KID + + R V QK+A+ WC +GNIPYFETSAKE N+++AF VA+ AL+ E ++
Sbjct: 185 KIDME-ENKRQVTQKRAMTWCQSKGNIPYFETSAKEAINVEQAFQTVAKNALQQEAEEQL 243
Query: 190 Y 190
Y
Sbjct: 244 Y 244
>gi|340718262|ref|XP_003397590.1| PREDICTED: ras-related protein Rab-7a-like [Bombus terrestris]
gi|350401790|ref|XP_003486263.1| PREDICTED: ras-related protein Rab-7a-like [Bombus impatiens]
Length = 207
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 122/206 (59%), Positives = 153/206 (74%), Gaps = 7/206 (3%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD++VT+QIWDT
Sbjct: 5 KKLLLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPFVVLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + S+V+ KKA +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 125 NKVDLE---SKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEVE 181
Query: 189 YYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 182 LYNEFPDQIKLTNDQRNNGKGDSCAC 207
>gi|307204727|gb|EFN83308.1| Ras-related protein Rab-7a [Harpegnathos saltator]
Length = 207
Score = 242 bits (618), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + SR V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 181 ELYNEFPDQIKLTNDQRSNGKGDSCAC 207
>gi|229367508|gb|ACQ58734.1| Ras-related protein Rab-7a [Anoplopoma fimbria]
Length = 207
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AF+RGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFHRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVTTKRAQAWCQSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|297263161|ref|XP_001095709.2| PREDICTED: ras-related protein Rab-7a [Macaca mulatta]
Length = 208
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 117/176 (66%), Positives = 140/176 (79%), Gaps = 3/176 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWDT
Sbjct: 6 KKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+LG
Sbjct: 66 AGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLG 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 126 NKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 178
>gi|322792890|gb|EFZ16723.1| hypothetical protein SINV_13124 [Solenopsis invicta]
Length = 209
Score = 242 bits (617), Expect = 7e-62, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D++VT+QIWD
Sbjct: 6 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQIWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+L
Sbjct: 66 TAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPFVVL 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + SR V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 126 GNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEV 182
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 183 ELYNEFPDQIKLTNDQRSNGRGDSCAC 209
>gi|333466057|gb|AEF33797.1| Rab7 [Fenneropenaeus chinensis]
Length = 237
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 149/205 (72%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 36 RKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 95
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF+SL +WR+EFL QA P + + PFV+L
Sbjct: 96 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPFVVL 155
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A +WC + +PYFETSAKE N++ AF +A AL E +
Sbjct: 156 GNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQESEV 212
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T ++ C+C
Sbjct: 213 ELYNEFPDQIKLTNDNKAKQDACSC 237
>gi|296809872|ref|XP_002845274.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
gi|238842662|gb|EEQ32324.1| GTP-binding protein ypt7 [Arthroderma otae CBS 113480]
Length = 205
Score = 242 bits (617), Expect = 8e-62, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 152/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV K+S YKATIGAD++TKE+ +D +LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA+ + E+ PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDVE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALLQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ V+ R CAC
Sbjct: 183 EFNGDFDDVINVNHDSDRDACAC 205
>gi|81251485|gb|ABB70064.1| WSSV receptor Rab7 [Penaeus monodon]
gi|254212147|gb|ACT65737.1| Rab7 [Litopenaeus vannamei]
gi|305693531|gb|ADM66002.1| Rab7 [Penaeus monodon]
Length = 205
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 149/205 (72%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKILLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A +WC + +PYFETSAKE N++ AF +A AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T ++ C+C
Sbjct: 181 ELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|429862214|gb|ELA36871.1| rab small monomeric gtpase [Colletotrichum gloeosporioides Nara
gc5]
Length = 205
Score = 242 bits (617), Expect = 9e-62, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + R GCAC
Sbjct: 180 ESEEFSGDYQDVINIPIENPRDGCAC 205
>gi|70906330|gb|AAZ14934.1| putative GTPase [Coprinellus disseminatus]
Length = 177
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 115/180 (63%), Positives = 143/180 (79%), Gaps = 9/180 (5%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TK +++DD+ VT+Q+WDT
Sbjct: 4 RSALLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKSVEVDDQQVTIQLWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADP-GEHEACPFVLL 127
AGQERFQSLG AFYRGADCCVLV+DVN K+F++L+ WR+EFL QA P G+ E PFV++
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLVFDVNSSKSFQALEGWRDEFLIQASPQGDPEEFPFVVV 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D V QK+A+ WCA +GN+PYFETSAKE N+++AF VA AL+ H +
Sbjct: 124 GNKVD--------VTQKRAMAWCAAKGNLPYFETSAKEAINVEQAFQSVAVKALQQGHDE 175
>gi|402085554|gb|EJT80452.1| Ras-like protein Rab7 [Gaeumannomyces graminis var. tritici
R3-111a-1]
Length = 205
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAVNVEQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIDNDRDGCAC 205
>gi|238914583|gb|ACR78134.1| predicted Rab7-like GTPase [Beauveria bassiana]
gi|346319897|gb|EGX89498.1| Ras-related protein Rab7 [Cordyceps militaris CM01]
gi|400600968|gb|EJP68636.1| Putative Rab7-like GTPase [Beauveria bassiana ARSEF 2860]
Length = 205
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 150/206 (72%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLM QYV +FS YKATIGADF TKE+ +DD+ VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMKQYVDKEFSASYKATIGADFSTKEVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID D S RV+ K+A+ +C +G+IPYFETSAKE N+D+AF +A AL E
Sbjct: 121 VVIGNKIDVD-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINVDQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + R GCAC
Sbjct: 180 ESEEFSGDFDDPINIHIENDRDGCAC 205
>gi|332022976|gb|EGI63242.1| Ras-related protein Rab-7a [Acromyrmex echinatior]
Length = 207
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + SR V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVE--QRGGCAC 210
Y P I T + + CAC
Sbjct: 181 ELYNEFPDQIKLTNDQRSNGRSDSCAC 207
>gi|198423784|ref|XP_002128753.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 154/206 (74%), Gaps = 6/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV + TF++L +WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +RVV K+A WC + +IPYFE SAK++ N+++AF VA+ AL E
Sbjct: 124 GNKIDLE---NRVVSYKRAQGWCHSKNDIPYFECSAKDNINVEQAFQTVAKQALMQESDA 180
Query: 188 IYYQ--PQGISETVSEVEQRGG-CAC 210
+ P I +E + + G C+C
Sbjct: 181 ELFNEFPDRIDLKNNESKPKSGDCSC 206
>gi|385301293|gb|EIF45495.1| gtpase rab7 [Dekkera bruxellensis AWRI1499]
Length = 205
Score = 241 bits (616), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 117/178 (65%), Positives = 143/178 (80%), Gaps = 1/178 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+ +LKVI+LGDSGVGKTSLM Q++ KFSQQYKATIGADF+ K++ +DDK VT+QIWD
Sbjct: 4 RRKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDMNIDDKQVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRG+DCCVLV+DV K+FE+LQNWR+EFL QA+ + ++ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGSDCCVLVFDVTNSKSFENLQNWRDEFLIQANIKDPDSFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNKID D S RVV KKA CA GNIPYFETSAKE N+++AF VA AL+ E
Sbjct: 124 GNKIDVD-ESKRVVSVKKAQALCASLGNIPYFETSAKEAVNVEQAFDVVARCALQQEE 180
>gi|380028118|ref|XP_003697757.1| PREDICTED: ras-related protein Rab-7a-like [Apis florea]
Length = 207
Score = 241 bits (615), Expect = 1e-61, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 153/206 (74%), Gaps = 7/206 (3%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD++VT+QIWDT
Sbjct: 5 KKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPFVVLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + ++V+ KKA +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 125 NKVDLE---TKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEVE 181
Query: 189 YYQ--PQGISETVSEVEQRGG--CAC 210
Y P I T + G CAC
Sbjct: 182 LYNEFPDQIKLTNDQRNNGKGDSCAC 207
>gi|171692347|ref|XP_001911098.1| hypothetical protein [Podospora anserina S mat+]
gi|170946122|emb|CAP72923.1| unnamed protein product [Podospora anserina S mat+]
Length = 205
Score = 241 bits (615), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDRDGCAC 205
>gi|449681808|ref|XP_002160165.2| PREDICTED: ras-related protein Rab-7a-like [Hydra magnipapillata]
Length = 206
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 5 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNSFKTLDSWRDEFLIQASPRDPENFPFVVL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + +R V K+A +WC + IPYFETSAKE N++ AF +A+ AL E
Sbjct: 125 GNKVDLE---NRAVSAKRAQQWCHSKNEIPYFETSAKEGINVEHAFQTIAKKALAQEADV 181
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I + CAC
Sbjct: 182 ELYNDFPDQIKLNPDNKPRSSDCAC 206
>gi|307188292|gb|EFN73084.1| Ras-related protein Rab-7a [Camponotus floridanus]
Length = 207
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 153/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVSAPTSFKSLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + SR V K+A +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKVDLE---SRAVSSKRAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEV 180
Query: 188 IYYQPQGISETVSEVEQRGG----CAC 210
Y +S ++ G CAC
Sbjct: 181 ELYNEFPDQIKLSNDQRSNGRGDSCAC 207
>gi|310792516|gb|EFQ28043.1| Ras family protein [Glomerella graminicola M1.001]
gi|380489971|emb|CCF36344.1| Ras-like protein Rab7 [Colletotrichum higginsianum]
Length = 205
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + R GC+C
Sbjct: 180 ESEEFSGDYQDVINIPIENPRDGCSC 205
>gi|156396428|ref|XP_001637395.1| predicted protein [Nematostella vectensis]
gi|156224507|gb|EDO45332.1| predicted protein [Nematostella vectensis]
Length = 205
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/205 (58%), Positives = 150/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTQPNSFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + +IPYFETSAKE N+++AF +A+ AL E
Sbjct: 124 GNKIDLE---NRAVSAKRAQAWCHSKNDIPYFETSAKEAINVEQAFQTIAKNALAQETDV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I + ++ CAC
Sbjct: 181 ELYNDFPDQIKLSGDTKPKQDNCAC 205
>gi|258567250|ref|XP_002584369.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
gi|237905815|gb|EEP80216.1| GTP-binding protein ypt7 [Uncinocarpus reesii 1704]
Length = 203
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 151/203 (74%), Gaps = 3/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV K+S YKATIGAD++TKE+ +DD+LVT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVLVDDRLVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFENLDSWRDEFLIQASPRDPESFPFV-- 121
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D S R++ K+A +C +GNIPYFETSAKE N+++AF +A++AL E +
Sbjct: 122 GNKVDVD-ESKRMISTKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKVALTQEESE 180
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R CAC
Sbjct: 181 EFNGDFTDPINIHLDNDRDACAC 203
>gi|67464143|pdb|1T91|A Chain A, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464144|pdb|1T91|B Chain B, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464145|pdb|1T91|C Chain C, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464146|pdb|1T91|D Chain D, Crystal Structure Of Human Small Gtpase Rab7(Gtp)
gi|67464282|pdb|1YHN|A Chain A, Structure Basis Of Rilp Recruitment By Rab7
Length = 207
Score = 241 bits (614), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 116/177 (65%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGLERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>gi|367037165|ref|XP_003648963.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
gi|346996224|gb|AEO62627.1| hypothetical protein THITE_2107012 [Thielavia terrestris NRRL 8126]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVMVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDRDGCAC 205
>gi|167378043|ref|XP_001734647.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165903767|gb|EDR29200.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 206
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 147/205 (71%), Gaps = 3/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQ+V +K+S YKATIGADF+TK+L +D+ VT+QIWD
Sbjct: 3 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERFQSLG AFYRGADCC L YDVN KTFESL NWREEFL QA P + PFV+L
Sbjct: 63 TAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALKNEH 185
GNK+DT GS + +KKA +WC+ NIP+FETSAK N+D AF +A+ IA K
Sbjct: 123 GNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGTD 181
Query: 186 KDIYYQPQGISETVSEVEQRGGCAC 210
DIY Q + + Q+ C C
Sbjct: 182 TDIYVMNQVNIDQPAPQAQKSDCTC 206
>gi|367024323|ref|XP_003661446.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
gi|347008714|gb|AEO56201.1| hypothetical protein MYCTH_2300844 [Myceliophthora thermophila ATCC
42464]
Length = 205
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 150/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALLQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDREGCAC 205
>gi|110777801|ref|XP_001120025.1| PREDICTED: ras-related protein Rab-7a-like [Apis mellifera]
Length = 207
Score = 240 bits (613), Expect = 2e-61, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 153/206 (74%), Gaps = 7/206 (3%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD++VT+QIWDT
Sbjct: 5 KKILLKVIILGDSGVGKTSLMNQYVSKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLV+DV+ +F+SL +WR+EFL QA P + + PFV+LG
Sbjct: 65 AGQERFQSLGVAFYRGADCCVLVFDVSAPSSFKSLDSWRDEFLIQASPRDPDNFPFVVLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + ++V+ KKA +WC + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 125 NKVDLE---TKVIHGKKAQQWCQSKNNIPYFETSAKEAINVEQAFQTIAKNALAQESEVE 181
Query: 189 YYQ--PQGISETVSEVE--QRGGCAC 210
Y P I T + + CAC
Sbjct: 182 LYNEFPDQIKLTNDQRNNGKSDSCAC 207
>gi|389634909|ref|XP_003715107.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|351647440|gb|EHA55300.1| Ras-like protein Rab7 [Magnaporthe oryzae 70-15]
gi|440475602|gb|ELQ44271.1| GTP-binding protein ypt7 [Magnaporthe oryzae Y34]
gi|440481863|gb|ELQ62400.1| GTP-binding protein ypt7 [Magnaporthe oryzae P131]
Length = 205
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 117/206 (56%), Positives = 152/206 (73%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLV+DVN K+F++L +WR+EFL QA P + + PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVLGNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + R GCAC
Sbjct: 180 ESEEFSGDFQDPINIHIDNDRDGCAC 205
>gi|67466081|ref|XP_649196.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|13537439|dbj|BAB40674.1| small GTPase Rab7A [Entamoeba histolytica]
gi|56465573|gb|EAL43810.1| small GTPase Rab7A [Entamoeba histolytica HM-1:IMSS]
gi|407041686|gb|EKE40891.1| small GTPase Rab7A, putative [Entamoeba nuttalli P19]
gi|449704349|gb|EMD44609.1| small GTPase Rab7A, putative [Entamoeba histolytica KU27]
Length = 206
Score = 240 bits (613), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 147/205 (71%), Gaps = 3/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQ+V +K+S YKATIGADF+TK+L +D+ VT+QIWD
Sbjct: 3 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERFQSLG AFYRGADCC L YDVN KTFESL NWREEFL QA P + PFV+L
Sbjct: 63 TAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALKNEH 185
GNK+DT GS + +KKA +WC+ NIP+FETSAK N+D AF +A+ IA K
Sbjct: 123 GNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGTD 181
Query: 186 KDIYYQPQGISETVSEVEQRGGCAC 210
DIY Q + + Q+ C C
Sbjct: 182 TDIYVMNQVNIDQPAPQAQKSDCPC 206
>gi|167466099|dbj|BAG06944.1| WSDV receptor Rab7 [Marsupenaeus japonicus]
Length = 205
Score = 240 bits (612), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 148/205 (72%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGK SLMNQ+V KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKILLKVIILGDSGVGKASLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A +WC + +PYFETSAKE N++ AF +A AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCHSKNEVPYFETSAKEAINVELAFQTIARNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T ++ C+C
Sbjct: 181 ELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|308502456|ref|XP_003113412.1| CRE-RAB-7 protein [Caenorhabditis remanei]
gi|308263371|gb|EFP07324.1| CRE-RAB-7 protein [Caenorhabditis remanei]
Length = 245
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+++ +DD+ VTLQIWD
Sbjct: 41 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 100
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL +DV +F+SL +WR+EFL QA P + + PFVLL
Sbjct: 101 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 160
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V K+A WC +GNIPY+E SAKE N++ AFL +A AL E ++
Sbjct: 161 GNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQE 218
Query: 188 IYYQPQ 193
P+
Sbjct: 219 TNDFPE 224
>gi|159126835|gb|EDP51951.1| alpha-galactosidase, putative [Aspergillus fumigatus A1163]
Length = 201
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+L IWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL----IWD 59
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 60 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 119
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 120 GNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAE 178
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 179 EFNGEFSDPINIHLDSDRDGCAC 201
>gi|313212632|emb|CBY36582.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 117/207 (56%), Positives = 152/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VTLQIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF+SL++WR+EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWRDEFLIQASPRDPDNFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WCA + ++P+FE SAKE +DEAF+ +A AL+ E
Sbjct: 124 GNKIDLE---NRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQEADT 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y+ P+ + ++ + CAC
Sbjct: 181 ELYKEVPERVDLRRNDAARSNSSDCAC 207
>gi|294867886|ref|XP_002765277.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239865290|gb|EEQ97994.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 239 bits (611), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 115/182 (63%), Positives = 144/182 (79%), Gaps = 2/182 (1%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+S +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDK+VT
Sbjct: 1 MSSAPRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERFQSLG AFYRGADCC LVYD+ K+FESL +WR+EFL QA P + E
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEF 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
PFV++GNK+D + + R V + +A WC + NIP FETSAK+ N+++AF+ +A AL+
Sbjct: 121 PFVVVGNKLDME--AKRKVSKARATTWCRSKDNIPCFETSAKDSLNVEQAFIEIARRALQ 178
Query: 183 NE 184
NE
Sbjct: 179 NE 180
>gi|17536699|ref|NP_496549.1| Protein RAB-7 [Caenorhabditis elegans]
gi|268533066|ref|XP_002631661.1| C. briggsae CBR-RAB-7 protein [Caenorhabditis briggsae]
gi|3880453|emb|CAA91357.1| Protein RAB-7 [Caenorhabditis elegans]
gi|341885407|gb|EGT41342.1| hypothetical protein CAEBREN_32671 [Caenorhabditis brenneri]
Length = 209
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+++ +DD+ VTLQIWD
Sbjct: 5 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL +DV +F+SL +WR+EFL QA P + + PFVLL
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V K+A WC +GNIPY+E SAKE N++ AFL +A AL E ++
Sbjct: 125 GNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQE 182
Query: 188 IYYQPQ 193
P+
Sbjct: 183 TNDFPE 188
>gi|399163149|gb|AFP33150.1| rab-7, partial [Caenorhabditis elegans]
Length = 208
Score = 239 bits (609), Expect = 6e-61, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+T+++ +DD+ VTLQIWD
Sbjct: 4 RKKALLKVIILGDSGVGKTSLMNQYVNRRFSNQYKATIGADFLTRDVNIDDRTVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL +DV +F+SL +WR+EFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLAFDVTNAASFKSLDSWRDEFLIQASPRDPDHFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V K+A WC +GNIPY+E SAKE N++ AFL +A AL E ++
Sbjct: 124 GNKVDLE--SQRAVSSKRAQSWCQTKGNIPYYEVSAKEALNVEAAFLAIARDALARESQE 181
Query: 188 IYYQPQ 193
P+
Sbjct: 182 TNDFPE 187
>gi|440550043|gb|AGC11524.1| Rab GTPase, partial [Larix sibirica]
gi|440550045|gb|AGC11525.1| Rab GTPase, partial [Larix sibirica]
gi|440550047|gb|AGC11526.1| Rab GTPase, partial [Larix sibirica]
gi|440550049|gb|AGC11527.1| Rab GTPase, partial [Larix sibirica]
gi|440550051|gb|AGC11528.1| Rab GTPase, partial [Larix sibirica]
gi|440550055|gb|AGC11530.1| Rab GTPase, partial [Larix sibirica]
gi|440550057|gb|AGC11531.1| Rab GTPase, partial [Larix sibirica]
gi|440550059|gb|AGC11532.1| Rab GTPase, partial [Larix sibirica]
gi|440550061|gb|AGC11533.1| Rab GTPase, partial [Larix sibirica]
gi|440550065|gb|AGC11535.1| Rab GTPase, partial [Larix sibirica]
gi|440550068|gb|AGC11536.1| Rab GTPase, partial [Larix sibirica]
gi|440550070|gb|AGC11537.1| Rab GTPase, partial [Larix sibirica]
gi|440550072|gb|AGC11538.1| Rab GTPase, partial [Larix sibirica]
gi|440550074|gb|AGC11539.1| Rab GTPase, partial [Larix sibirica]
gi|440550076|gb|AGC11540.1| Rab GTPase, partial [Larix sibirica]
gi|440550078|gb|AGC11541.1| Rab GTPase, partial [Larix sibirica]
gi|440550080|gb|AGC11542.1| Rab GTPase, partial [Larix sibirica]
gi|440550082|gb|AGC11543.1| Rab GTPase, partial [Larix sibirica]
gi|440550086|gb|AGC11545.1| Rab GTPase, partial [Larix sibirica]
gi|440550088|gb|AGC11546.1| Rab GTPase, partial [Larix sibirica]
gi|440550090|gb|AGC11547.1| Rab GTPase, partial [Larix sibirica]
gi|440550092|gb|AGC11548.1| Rab GTPase, partial [Larix sibirica]
gi|440550094|gb|AGC11549.1| Rab GTPase, partial [Larix sibirica]
gi|440550096|gb|AGC11550.1| Rab GTPase, partial [Larix sibirica]
gi|440550098|gb|AGC11551.1| Rab GTPase, partial [Larix sibirica]
gi|440550100|gb|AGC11552.1| Rab GTPase, partial [Larix sibirica]
gi|440550104|gb|AGC11554.1| Rab GTPase, partial [Larix sibirica]
gi|440550106|gb|AGC11555.1| Rab GTPase, partial [Larix sibirica]
gi|440550108|gb|AGC11556.1| Rab GTPase, partial [Larix sibirica]
gi|440550110|gb|AGC11557.1| Rab GTPase, partial [Larix sibirica]
gi|440550112|gb|AGC11558.1| Rab GTPase, partial [Larix sibirica]
gi|440550114|gb|AGC11559.1| Rab GTPase, partial [Larix sibirica]
gi|440550116|gb|AGC11560.1| Rab GTPase, partial [Larix sibirica]
gi|440550118|gb|AGC11561.1| Rab GTPase, partial [Larix sibirica]
gi|440550120|gb|AGC11562.1| Rab GTPase, partial [Larix sibirica]
gi|440550122|gb|AGC11563.1| Rab GTPase, partial [Larix sibirica]
gi|440550124|gb|AGC11564.1| Rab GTPase, partial [Larix sibirica]
gi|440550126|gb|AGC11565.1| Rab GTPase, partial [Larix sibirica]
gi|440550128|gb|AGC11566.1| Rab GTPase, partial [Larix sibirica]
gi|440550130|gb|AGC11567.1| Rab GTPase, partial [Larix sibirica]
gi|440550132|gb|AGC11568.1| Rab GTPase, partial [Larix sibirica]
gi|440550134|gb|AGC11569.1| Rab GTPase, partial [Larix sibirica]
gi|440550136|gb|AGC11570.1| Rab GTPase, partial [Larix sibirica]
gi|440550138|gb|AGC11571.1| Rab GTPase, partial [Larix sibirica]
gi|440550140|gb|AGC11572.1| Rab GTPase, partial [Larix sibirica]
gi|440550142|gb|AGC11573.1| Rab GTPase, partial [Larix sibirica]
gi|440550144|gb|AGC11574.1| Rab GTPase, partial [Larix sibirica]
gi|440550146|gb|AGC11575.1| Rab GTPase, partial [Larix sibirica]
gi|440550148|gb|AGC11576.1| Rab GTPase, partial [Larix sibirica]
gi|440550150|gb|AGC11577.1| Rab GTPase, partial [Larix sibirica]
gi|440550152|gb|AGC11578.1| Rab GTPase, partial [Larix sibirica]
gi|440550154|gb|AGC11579.1| Rab GTPase, partial [Larix sibirica]
gi|440550156|gb|AGC11580.1| Rab GTPase, partial [Larix sibirica]
gi|440550158|gb|AGC11581.1| Rab GTPase, partial [Larix sibirica]
gi|440550160|gb|AGC11582.1| Rab GTPase, partial [Larix sibirica]
gi|440550162|gb|AGC11583.1| Rab GTPase, partial [Larix sibirica]
gi|440550164|gb|AGC11584.1| Rab GTPase, partial [Larix sibirica]
gi|440550166|gb|AGC11585.1| Rab GTPase, partial [Larix sibirica]
gi|440550168|gb|AGC11586.1| Rab GTPase, partial [Larix sibirica]
gi|440550170|gb|AGC11587.1| Rab GTPase, partial [Larix sibirica]
gi|440550172|gb|AGC11588.1| Rab GTPase, partial [Larix sibirica]
gi|440550174|gb|AGC11589.1| Rab GTPase, partial [Larix sibirica]
gi|440550176|gb|AGC11590.1| Rab GTPase, partial [Larix sibirica]
gi|440550178|gb|AGC11591.1| Rab GTPase, partial [Larix sibirica]
gi|440550180|gb|AGC11592.1| Rab GTPase, partial [Larix sibirica]
gi|440550182|gb|AGC11593.1| Rab GTPase, partial [Larix sibirica]
gi|440550184|gb|AGC11594.1| Rab GTPase, partial [Larix sibirica]
gi|440550186|gb|AGC11595.1| Rab GTPase, partial [Larix sibirica]
gi|440550188|gb|AGC11596.1| Rab GTPase, partial [Larix sibirica]
gi|440550190|gb|AGC11597.1| Rab GTPase, partial [Larix sibirica]
gi|440550192|gb|AGC11598.1| Rab GTPase, partial [Larix sibirica]
gi|440550194|gb|AGC11599.1| Rab GTPase, partial [Larix sibirica]
gi|440550196|gb|AGC11600.1| Rab GTPase, partial [Larix sibirica]
gi|440550198|gb|AGC11601.1| Rab GTPase, partial [Larix sibirica]
gi|440550200|gb|AGC11602.1| Rab GTPase, partial [Larix sibirica]
gi|440550202|gb|AGC11603.1| Rab GTPase, partial [Larix sibirica]
gi|440550204|gb|AGC11604.1| Rab GTPase, partial [Larix sibirica]
gi|440550206|gb|AGC11605.1| Rab GTPase, partial [Larix sibirica]
gi|440550208|gb|AGC11606.1| Rab GTPase, partial [Larix sibirica]
gi|440550210|gb|AGC11607.1| Rab GTPase, partial [Larix sibirica]
gi|440550212|gb|AGC11608.1| Rab GTPase, partial [Larix sibirica]
gi|440550214|gb|AGC11609.1| Rab GTPase, partial [Larix sibirica]
gi|440550216|gb|AGC11610.1| Rab GTPase, partial [Larix sibirica]
gi|440550218|gb|AGC11611.1| Rab GTPase, partial [Larix sibirica]
gi|440550220|gb|AGC11612.1| Rab GTPase, partial [Larix sibirica]
gi|440550222|gb|AGC11613.1| Rab GTPase, partial [Larix sibirica]
gi|440550224|gb|AGC11614.1| Rab GTPase, partial [Larix sibirica]
gi|440550228|gb|AGC11616.1| Rab GTPase, partial [Larix sibirica]
gi|440550230|gb|AGC11617.1| Rab GTPase, partial [Larix sibirica]
gi|440550232|gb|AGC11618.1| Rab GTPase, partial [Larix sibirica]
gi|440550234|gb|AGC11619.1| Rab GTPase, partial [Larix sibirica]
gi|440550236|gb|AGC11620.1| Rab GTPase, partial [Larix sibirica]
gi|440550238|gb|AGC11621.1| Rab GTPase, partial [Larix sibirica]
gi|440550240|gb|AGC11622.1| Rab GTPase, partial [Larix sibirica]
gi|440550242|gb|AGC11623.1| Rab GTPase, partial [Larix sibirica]
gi|440550244|gb|AGC11624.1| Rab GTPase, partial [Larix sibirica]
gi|440550246|gb|AGC11625.1| Rab GTPase, partial [Larix sibirica]
gi|440550248|gb|AGC11626.1| Rab GTPase, partial [Larix sibirica]
gi|440550250|gb|AGC11627.1| Rab GTPase, partial [Larix sibirica]
gi|440550252|gb|AGC11628.1| Rab GTPase, partial [Larix sibirica]
gi|440550254|gb|AGC11629.1| Rab GTPase, partial [Larix sibirica]
gi|440550256|gb|AGC11630.1| Rab GTPase, partial [Larix sibirica]
gi|440550258|gb|AGC11631.1| Rab GTPase, partial [Larix sibirica]
gi|440550260|gb|AGC11632.1| Rab GTPase, partial [Larix sibirica]
gi|440550262|gb|AGC11633.1| Rab GTPase, partial [Larix sibirica]
gi|440550264|gb|AGC11634.1| Rab GTPase, partial [Larix sibirica]
gi|440550266|gb|AGC11635.1| Rab GTPase, partial [Larix sibirica]
gi|440550268|gb|AGC11636.1| Rab GTPase, partial [Larix sibirica]
gi|440550270|gb|AGC11637.1| Rab GTPase, partial [Larix sibirica]
gi|440550272|gb|AGC11638.1| Rab GTPase, partial [Larix sibirica]
gi|440550274|gb|AGC11639.1| Rab GTPase, partial [Larix sibirica]
gi|440550276|gb|AGC11640.1| Rab GTPase, partial [Larix sibirica]
gi|440550278|gb|AGC11641.1| Rab GTPase, partial [Larix sibirica]
gi|440550280|gb|AGC11642.1| Rab GTPase, partial [Larix sibirica]
gi|440550282|gb|AGC11643.1| Rab GTPase, partial [Larix sibirica]
gi|440550284|gb|AGC11644.1| Rab GTPase, partial [Larix sibirica]
gi|440550286|gb|AGC11645.1| Rab GTPase, partial [Larix sibirica]
gi|440550288|gb|AGC11646.1| Rab GTPase, partial [Larix sibirica]
gi|440550290|gb|AGC11647.1| Rab GTPase, partial [Larix sibirica]
gi|440550292|gb|AGC11648.1| Rab GTPase, partial [Larix sibirica]
gi|440550294|gb|AGC11649.1| Rab GTPase, partial [Larix sibirica]
gi|440550296|gb|AGC11650.1| Rab GTPase, partial [Larix occidentalis]
gi|440550298|gb|AGC11651.1| Rab GTPase, partial [Larix occidentalis]
gi|440550300|gb|AGC11652.1| Rab GTPase, partial [Larix occidentalis]
gi|440550302|gb|AGC11653.1| Rab GTPase, partial [Larix occidentalis]
gi|440550304|gb|AGC11654.1| Rab GTPase, partial [Larix occidentalis]
gi|440550306|gb|AGC11655.1| Rab GTPase, partial [Larix occidentalis]
gi|440550308|gb|AGC11656.1| Rab GTPase, partial [Larix occidentalis]
gi|440550310|gb|AGC11657.1| Rab GTPase, partial [Larix occidentalis]
gi|440550312|gb|AGC11658.1| Rab GTPase, partial [Larix occidentalis]
gi|440550314|gb|AGC11659.1| Rab GTPase, partial [Larix occidentalis]
gi|440550316|gb|AGC11660.1| Rab GTPase, partial [Larix occidentalis]
gi|440550318|gb|AGC11661.1| Rab GTPase, partial [Larix occidentalis]
gi|440550320|gb|AGC11662.1| Rab GTPase, partial [Larix occidentalis]
gi|440550322|gb|AGC11663.1| Rab GTPase, partial [Larix occidentalis]
gi|440550324|gb|AGC11664.1| Rab GTPase, partial [Larix occidentalis]
Length = 158
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 131/153 (85%)
Query: 32 YVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLV 91
YV KFS QYKATIGADF+TKE++++D+LVT+QIWDTAGQERFQSLG AFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 92 YDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCA 151
YDVNV K+F++L NWR+EFL QA+P + E PFV+LGNK D D G SRVV +KKA WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 152 YRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+GNIPYFETSAKED N++EAF C+A+ ALKNE
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNE 153
>gi|328875514|gb|EGG23878.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 293
Score = 238 bits (608), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 116/173 (67%), Positives = 137/173 (79%), Gaps = 2/173 (1%)
Query: 23 VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFY 82
VGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWDTAGQERFQSLG AFY
Sbjct: 108 VGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWDTAGQERFQSLGVAFY 167
Query: 83 RGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVP 142
RGADCCVLVYDVNV KTFE+L +WR+EFL QA P + + PFV+LGNKID + RVV
Sbjct: 168 RGADCCVLVYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVLGNKIDLEN--QRVVS 225
Query: 143 QKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGI 195
QK+A WC +GNIPYFETSAKE N+++AF +A A+K E ++ P GI
Sbjct: 226 QKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGLVFPIPPGI 278
>gi|427787197|gb|JAA59050.1| hypothetical protein [Rhipicephalus pulchellus]
Length = 204
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 150/203 (73%), Gaps = 5/203 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LG+SGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV V +F++L++WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALESWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V K+A WC + IPYFETSAKE N+++AF VA+ AL E
Sbjct: 124 GNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQETDV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGC 208
Y P I T + + GC
Sbjct: 181 ELYNEFPDQIKLTNEQKPRSQGC 203
>gi|291388446|ref|XP_002710790.1| PREDICTED: RAB7A, member RAS oncogene family-like [Oryctolagus
cuniculus]
Length = 207
Score = 238 bits (608), Expect = 9e-61, Method: Compositional matrix adjust.
Identities = 115/177 (64%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KF QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFRNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSL AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLCVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A+ ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIAQNALKQE 177
>gi|6942102|gb|AAF32317.1|AF218311_1 Rab7-like GTPase [Entamoeba histolytica]
Length = 206
Score = 238 bits (608), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 121/204 (59%), Positives = 146/204 (71%), Gaps = 3/204 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLKVI+LGDSGVGKTSLMNQ+V +K+S YKATIGADF+TK+L +D+ VT+QIWDT
Sbjct: 4 KKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG ERFQSLG AFYRGADCC L YDVN KTFESL NWREEFL QA P + PFV+LG
Sbjct: 64 AGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALKNEHK 186
NK+DT GS + +KKA +WC+ NIP+FETSAK N+D AF +A+ IA K
Sbjct: 124 NKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAAFQSIAQAAIAQKGTDT 182
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
DIY Q + + Q+ C C
Sbjct: 183 DIYVMNQVNIDQPAPQAQKSDCPC 206
>gi|440550226|gb|AGC11615.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 130/153 (84%)
Query: 32 YVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLV 91
YV KFS QYKATIGADF+TKE++++D+LVT+QIWDTAGQERFQSLG AFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTMQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 92 YDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCA 151
YDVNV K+F +L NWR+EFL QA+P + E PFV+LGNK D D G SRVV +KKA WCA
Sbjct: 61 YDVNVMKSFNNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 152 YRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+GNIPYFETSAKED N++EAF C+A+ ALKNE
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNE 153
>gi|294955682|ref|XP_002788627.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239904168|gb|EER20423.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 215
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 114/182 (62%), Positives = 142/182 (78%), Gaps = 2/182 (1%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+S +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDK+VT
Sbjct: 1 MSSAPRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERFQSLG AFYRGADCC LVYD+ K+FESL +WR+EFL QA P + E
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEF 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
PFV++GNK+D + R V + +A WC + IP FETSAK+ N+++AF+ +A AL+
Sbjct: 121 PFVVVGNKLDMEA--KRKVSKARATTWCRSKNTIPCFETSAKDSLNVEQAFIEIARRALQ 178
Query: 183 NE 184
NE
Sbjct: 179 NE 180
>gi|347966247|ref|XP_321482.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|347966249|ref|XP_001689335.2| AGAP001617-PB [Anopheles gambiae str. PEST]
gi|333470146|gb|EAA00927.4| AGAP001617-PA [Anopheles gambiae str. PEST]
gi|333470147|gb|EDO63240.2| AGAP001617-PB [Anopheles gambiae str. PEST]
Length = 207
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 152/207 (73%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +D+++VT+QIWD
Sbjct: 4 RKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF++L++WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ A+ E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQTKNDIPYFETSAKEGINVDLAFQTIAKNAIAQETEV 180
Query: 187 DIYYQ-PQGISETVSEVEQRGG--CAC 210
D+Y P I + R G C+C
Sbjct: 181 DLYNDFPDQIKLNTRDSRPRNGDNCSC 207
>gi|59802950|gb|AAX07679.1| ras-related protein-like protein [Magnaporthe grisea]
Length = 205
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 149/203 (73%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQER QSLG AFYRGADCCVLV+DVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERIQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIDNDRDGCAC 205
>gi|312372342|gb|EFR20324.1| hypothetical protein AND_20302 [Anopheles darlingi]
Length = 192
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +D+++VT+QIWD
Sbjct: 4 RKKALLKVIVLGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDERVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF++L++WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLESWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A +WC + NIPYFETSAKE N+D AF +A+ A+ E
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQAKNNIPYFETSAKEGINVDLAFQTIAKNAIAQE 177
>gi|452820386|gb|EME27429.1| Rab family, other [Galdieria sulphuraria]
Length = 206
Score = 238 bits (607), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 115/208 (55%), Positives = 154/208 (74%), Gaps = 5/208 (2%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S ++ R LLKV+VLGDSGVGKTSL+ ++V +FSQQYKATIGADF+TK++ +DD+ V L
Sbjct: 3 SSSITRPKLLKVVVLGDSGVGKTSLLERFVNRRFSQQYKATIGADFLTKDMFVDDRNVNL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQER+QSLGSAFYRGAD CVLVYD+ K+FESL+ WR+EFL A P + + P
Sbjct: 63 QIWDTAGQERYQSLGSAFYRGADACVLVYDITDVKSFESLETWRDEFLVSASPSDPQHFP 122
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
F++LGNK D +G R VP ++A +WC +G+IPYFETSAKE+ ++D+AF V AL+
Sbjct: 123 FIVLGNKSDLEG--QRSVPSRRAQQWCVSKGDIPYFETSAKENISVDKAFDVVVTNALRR 180
Query: 184 -EHKDIYYQPQGISETVSEVEQRGGCAC 210
E ++ +Y P + +S+ + C C
Sbjct: 181 GEREEEFYLPDTVE--LSDKQTSSTCQC 206
>gi|241752313|ref|XP_002401040.1| RAB-9 and, putative [Ixodes scapularis]
gi|215508295|gb|EEC17749.1| RAB-9 and, putative [Ixodes scapularis]
gi|442759143|gb|JAA71730.1| Hypothetical protein [Ixodes ricinus]
Length = 204
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 119/206 (57%), Positives = 153/206 (74%), Gaps = 5/206 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LG+SGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D+LVT+Q
Sbjct: 1 MSSRKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLV+DV V +F++L++WR+EFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPASFKALESWRDEFLIQASPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNK+D D +R V K+A WC + IPYFETSAKE N+++AF VA+ AL E
Sbjct: 121 VVIGNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQE 177
Query: 185 HKDIYYQ--PQGISETVSEVEQRGGC 208
+ Y P I T + + GC
Sbjct: 178 TEVELYNEFPDQIKLTGEQKPRSQGC 203
>gi|440550063|gb|AGC11534.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 238 bits (606), Expect = 1e-60, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 130/153 (84%)
Query: 32 YVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLV 91
YV KFS QYKATIGADF+TKE++++D+LVT QIWDTAGQERFQSLG AFYRGADCCVLV
Sbjct: 1 YVTKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 92 YDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCA 151
YDVNV K+F++L NWR+EFL QA+P + E PFV+LGNK D D G SRVV +KKA WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 152 YRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+GNIPYFETSAKED N++EAF C+A+ ALKNE
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNE 153
>gi|346467979|gb|AEO33834.1| hypothetical protein [Amblyomma maculatum]
Length = 204
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 120/203 (59%), Positives = 149/203 (73%), Gaps = 5/203 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LG+SGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGESGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV V +F++L WR+EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTVPGSFKALXXWRDEFLIQASPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V K+A WC + IPYFETSAKE N+++AF VA+ AL E +
Sbjct: 124 GNKVDLD---NRGVSTKRAQGWCQSKNGIPYFETSAKEALNVEQAFQTVAKNALAQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGC 208
Y P I T + + GC
Sbjct: 181 ELYNEFPDQIKLTNEQKPRSQGC 203
>gi|126722751|ref|NP_001075503.1| ras-related protein Rab-7a [Oryctolagus cuniculus]
gi|6685839|sp|O97572.1|RAB7A_RABIT RecName: Full=Ras-related protein Rab-7a
gi|4105817|gb|AAD02564.1| Rab7 [Oryctolagus cuniculus]
Length = 207
Score = 238 bits (606), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 147/207 (71%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSL AFYRGADCCVLV+DV TF++L +WR EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A W + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + C+C
Sbjct: 181 ELYNEFPEPMKLDKNDRAKTSAESCSC 207
>gi|440550053|gb|AGC11529.1| Rab GTPase, partial [Larix sibirica]
gi|440550084|gb|AGC11544.1| Rab GTPase, partial [Larix sibirica]
gi|440550102|gb|AGC11553.1| Rab GTPase, partial [Larix sibirica]
Length = 158
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 111/153 (72%), Positives = 130/153 (84%)
Query: 32 YVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLV 91
YV KFS QYKATIGADF+TKE++++D+LVT QIWDTAGQERFQSLG AFYRGADCCVLV
Sbjct: 1 YVNKKFSNQYKATIGADFLTKEVEVEDRLVTTQIWDTAGQERFQSLGVAFYRGADCCVLV 60
Query: 92 YDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCA 151
YDVNV K+F++L NWR+EFL QA+P + E PFV+LGNK D D G SRVV +KKA WCA
Sbjct: 61 YDVNVMKSFDNLDNWRQEFLIQANPTDPENFPFVVLGNKTDVDDGHSRVVSEKKAKMWCA 120
Query: 152 YRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+GNIPYFETSAKED N++EAF C+A+ ALKNE
Sbjct: 121 AKGNIPYFETSAKEDMNVEEAFQCIAKNALKNE 153
>gi|296005155|ref|XP_002808912.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
gi|13509187|emb|CAB92946.2| putative Rab7 GTPase [Plasmodium falciparum 3D7]
gi|225631795|emb|CAX64193.1| PfRab7, GTPase [Plasmodium falciparum 3D7]
Length = 206
Score = 237 bits (605), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 112/180 (62%), Positives = 141/180 (78%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+R +LKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE +D++ +T+QIWD
Sbjct: 4 KKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEQITMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL++W++EFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPENFPFVII 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V K L+WC NIPYFETSAK N+D+AF +A A+K EH++
Sbjct: 124 GNKVDE--TNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQEHQE 181
>gi|290981522|ref|XP_002673479.1| rab family small GTPase [Naegleria gruberi]
gi|284087063|gb|EFC40735.1| rab family small GTPase [Naegleria gruberi]
Length = 204
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 152/206 (73%), Gaps = 4/206 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M ++ LLKVIVLGDS VGKTSLMNQ+V KFS QYKATIGADF+TKE+ ++DK+ +L IW
Sbjct: 1 MSKKELLKVIVLGDSSVGKTSLMNQFVSKKFSTQYKATIGADFLTKEVMIEDKMCSLSIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF SLG AF+RG+D CVLV+D+ V KTFE++ NWR+EFL Q P + + PFVL
Sbjct: 61 DTAGQERFHSLGFAFFRGSDACVLVFDITVPKTFENVNNWRDEFLMQTTPEDPDNFPFVL 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNK+D + + R V QK+ WC +GNIPYFE SAK+ N++ AF+ +A+ AL +
Sbjct: 121 IGNKVDME--NMRQVQQKQVTNWCRSKGNIPYFECSAKDGTNVENAFVTLAKRALSVAKE 178
Query: 187 DIYYQPQGISETVSE--VEQRGGCAC 210
DI + +G+++ E +Q GC+C
Sbjct: 179 DIIQRNEGLTDFGDEPKPQQNTGCSC 204
>gi|380449163|gb|AFD54570.1| Ras-related protein Rab7 [Litopenaeus vannamei]
Length = 205
Score = 237 bits (604), Expect = 2e-60, Method: Compositional matrix adjust.
Identities = 119/205 (58%), Positives = 147/205 (71%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKILLKVIJLGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV TF+SL +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNTFKSLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NKID + +R V K+A +WC + PYFETSAKE N++ AF +A AL E +
Sbjct: 124 XNKIDLE---NRAVSTKRAQQWCHSKNEXPYFETSAKEAINVELAFQTIARNALAQESEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P I T ++ C+C
Sbjct: 181 ELYNEFPDQIKLTNDNKAKQDACSC 205
>gi|226295502|gb|ACO40522.1| Rab7-like protein [Pinctada martensi]
Length = 206
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/206 (58%), Positives = 153/206 (74%), Gaps = 6/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIG-ADFVTKELQMDDKLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM+QYV KFS QYKATIG ADF+TKE+ ++D+L+T+QIW
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMSQYVNKKFSNQYKATIGSADFLTKEVMVEDRLLTMQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGA CCVLV+DV + TFESL +WR+EFL QA P + E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGAHCCVLVFDVPMPNTFESLDSWRDEFLIQASPRDPENFPFVV 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNKID + +R V K+A WC +G IPYFETSAKE N+++AF VA+ AL E +
Sbjct: 124 IGNKIDVE---NRAVTAKRAQGWCNSKGEIPYFETSAKEAINVEQAFQTVAKNALAQETE 180
Query: 187 DIYYQ--PQGISETVSEVEQRGGCAC 210
Y P + T ++ + + GC C
Sbjct: 181 VELYNEFPDPVKLTDNQNKPKEGCGC 206
>gi|357619225|gb|EHJ71885.1| Rab7 [Danaus plexippus]
Length = 208
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 152/208 (73%), Gaps = 8/208 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF+SL++WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + +R V K+A +WC + +IPYFETSAKE N++ AF +A AL E +
Sbjct: 124 GNKVDLE---NRAVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEA 180
Query: 188 IYYQ--PQGISETVSEV-EQRGG--CAC 210
Y P I ++ R G CAC
Sbjct: 181 ELYNEFPDQIKLNANDNGRNRDGDNCAC 208
>gi|312088377|ref|XP_003145838.1| RAB family member [Loa loa]
gi|307758997|gb|EFO18231.1| Ras-like protein Rab-7a [Loa loa]
Length = 212
Score = 237 bits (604), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ + D+ VT+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YD+ +F SL++WR+EFL QA P + E PFVLL
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R V K+A WC + NI Y+E SAKE N+++AF+ +A ALK E +D
Sbjct: 128 GNKIDLE--AKRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKREAQD 185
Query: 188 IYYQPQ 193
+ P+
Sbjct: 186 VQDFPE 191
>gi|170579042|ref|XP_001894651.1| ras-related protein Rab-7 [Brugia malayi]
gi|158598646|gb|EDP36501.1| ras-related protein Rab-7, putative [Brugia malayi]
Length = 212
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 149/207 (71%), Gaps = 6/207 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ + D+ VT+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YD+ +F SL++WR+EFL QA P + E PFVLL
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R V K+A WC + NI Y+E SAKE N+++AF+ +A ALK E +D
Sbjct: 128 GNKIDLE--ARRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKREAQD 185
Query: 188 IYYQPQ---GISETVSEVEQ-RGGCAC 210
+ P+ I E+ Q GC C
Sbjct: 186 VQDFPEFPDQIRLDHREIAQPNSGCNC 212
>gi|145546430|ref|XP_001458898.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834089|emb|CAI44446.1| rab_A30 [Paramecium tetraurelia]
gi|124426720|emb|CAK91501.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/204 (55%), Positives = 149/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 KKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D S R V + KA +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ASERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + ++GGC
Sbjct: 182 EIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|402589927|gb|EJW83858.1| Rab7 protein [Wuchereria bancrofti]
Length = 212
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 113/186 (60%), Positives = 142/186 (76%), Gaps = 2/186 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ + D+ VT+QIWD
Sbjct: 8 RKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDISVGDRTVTMQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YD+ +F SL++WR+EFL QA P + E PFVLL
Sbjct: 68 TAGQERFQSLGVAFYRGADCCVLTYDITNASSFRSLESWRDEFLIQASPRDPEHFPFVLL 127
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + R V K+A WC + NI Y+E SAKE N+++AF+ +A ALK E +D
Sbjct: 128 GNKIDLE--ARRAVSAKRAQAWCQTKNNIKYYEVSAKEAVNVEQAFIEIARDALKREAQD 185
Query: 188 IYYQPQ 193
+ P+
Sbjct: 186 VQDFPE 191
>gi|402237919|gb|AFQ38857.1| GTP-binding protein Ypt7 [Magnaporthe oryzae]
Length = 205
Score = 236 bits (603), Expect = 3e-60, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+W+TAGQERFQSLG AFYRGADCCVLV+DVN K+F++L +WR+EFL QA P + + PF
Sbjct: 61 LWNTAGQERFQSLGVAFYRGADCCVLVFDVNNSKSFDALDSWRDEFLIQASPRDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LG KID + S RV+ K+A+ +C +G IPYFETSAKE N+++AF +A AL E
Sbjct: 121 VVLGTKIDVE-ESKRVISTKRAMTFCQSKGGIPYFETSAKEAINVEQAFEVIARNALAQE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
+ + + R GCAC
Sbjct: 180 ESEEFSGDFQDPINIHIDNDRDGCAC 205
>gi|301117014|ref|XP_002906235.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
gi|262107584|gb|EEY65636.1| Rab7 family GTPase, putative [Phytophthora infestans T30-4]
Length = 206
Score = 236 bits (603), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 121/209 (57%), Positives = 154/209 (73%), Gaps = 8/209 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLK+I+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDKLVT+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGAD CVLVYD+ K+FE L WR+EFL QA P + +A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRG---NIPYFETSAKEDCNIDEAFLCVAEIAL 181
++LGNK+D + S R V +++A EWC + I +FETSAKE +++EAF +A AL
Sbjct: 121 IVLGNKVDKE--SERRVQKQRAQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSAL 178
Query: 182 KNEHKDIYYQPQGI--SETVSEVEQRGGC 208
+ +DIY P+ I S T S+ E C
Sbjct: 179 QKGQEDIYV-PETIDLSGTSSKRESSSCC 206
>gi|313213249|emb|CBY37091.1| unnamed protein product [Oikopleura dioica]
Length = 207
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 151/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VTLQIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSSQYKATIGADFLTKEVLVDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF+SL++W +EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKSLESWGDEFLIQASPRDPDNFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WCA + ++P+FE SAKE +DEAF+ +A AL+ E
Sbjct: 124 GNKIDLE---NRAVTPKRAQAWCAAKNDLPHFECSAKEATKVDEAFVTIARAALQQEADT 180
Query: 188 IYYQ--PQGISETVSEVEQRGG--CAC 210
Y+ P+ + ++ + CAC
Sbjct: 181 ELYKEVPERVDLRRNDAARSNSSDCAC 207
>gi|114051368|ref|NP_001040368.1| Rab7 [Bombyx mori]
gi|95102652|gb|ABF51264.1| Rab7 [Bombyx mori]
Length = 208
Score = 236 bits (602), Expect = 4e-60, Method: Compositional matrix adjust.
Identities = 120/208 (57%), Positives = 151/208 (72%), Gaps = 8/208 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKLLLKVIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF+SL++WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKSLESWRDEFLIQASPRDPDNFPFVIL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V K+ +WC + +IPYFETSAKE N++ AF +A AL E +
Sbjct: 124 GNKVDLD---NRAVSVKRGQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEA 180
Query: 188 IYYQ--PQGISETVSEV-EQRGG--CAC 210
Y P I ++ R G CAC
Sbjct: 181 ELYNEFPDQIKLNANDNGRNRDGDNCAC 208
>gi|348688127|gb|EGZ27941.1| hypothetical protein PHYSODRAFT_284160 [Phytophthora sojae]
Length = 207
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 120/209 (57%), Positives = 153/209 (73%), Gaps = 7/209 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLK+I+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDKLVT+Q
Sbjct: 1 MSHRKKVLLKLIILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIMLDDKLVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGAD CVLVYD+ K+FE L WR+EFL QA P + +A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVYDITNPKSFEKLDTWRDEFLAQAGPRDPDAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRG---NIPYFETSAKEDCNIDEAFLCVAEIAL 181
++LGNK+D + S R V ++K+ EWC + I +FETSAKE +++EAF +A AL
Sbjct: 121 IVLGNKVDKE--SERRVRKEKSQEWCRSKNVQQPIQHFETSAKEATSVEEAFQTIASSAL 178
Query: 182 KNEHKDIYYQPQGI--SETVSEVEQRGGC 208
+ +D Y P+ I S T S+ E C
Sbjct: 179 QKGQEDDIYVPETIDLSGTSSKRESSSCC 207
>gi|399932055|gb|AFP57563.1| Ras-related protein Rab-7a [Latrodectus hesperus]
Length = 206
Score = 236 bits (602), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 115/206 (55%), Positives = 150/206 (72%), Gaps = 6/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMN YV +FS QYKATIGADF+T+E+Q++D+LVT+QIWD
Sbjct: 4 RKKLLLKVIILGDSGVGKTSLMNMYVNKRFSNQYKATIGADFLTREVQVNDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AF+RGADCCVLVYDV +F+SL NW +EF+ Q+ P E PFV++
Sbjct: 64 TAGQERFQSLGHAFFRGADCCVLVYDVTSPTSFKSLDNWFDEFMVQSGPRNPEEFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R + K+ WC + NIP+FETSAKE N+++AF CVA+ AL E
Sbjct: 124 GNKIDLE---NRAISTKRGQGWCQSKNNIPFFETSAKESINVEQAFQCVAKNALAQEQDA 180
Query: 188 IYYQ--PQGISETVSEVEQRG-GCAC 210
+ P+ I T ++ + CAC
Sbjct: 181 ELFNDFPEQIKLTNNDARPKSDSCAC 206
>gi|389582872|dbj|GAB65608.1| small GTPase Rab7 [Plasmodium cynomolgi strain B]
Length = 184
Score = 236 bits (601), Expect = 5e-60, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 141/180 (78%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+R +LKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE +D++ +T+QIWD
Sbjct: 4 KKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL++W++EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPFVII 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V K L+WC NIPYFETSAK N+D+AF +A A+K EH++
Sbjct: 124 GNKVDE--TNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQEHQE 181
>gi|324508943|gb|ADY43771.1| Ras-related protein Rab-7a [Ascaris suum]
Length = 213
Score = 236 bits (601), Expect = 6e-60, Method: Compositional matrix adjust.
Identities = 115/207 (55%), Positives = 151/207 (72%), Gaps = 6/207 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TK++ + D++VT+QIWD
Sbjct: 9 RKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVMIGDRMVTMQIWD 68
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDV +F+SL++WR+EFL QA P + E PFVLL
Sbjct: 69 TAGQERFQSLGVAFYRGADCCVLTYDVTNASSFKSLESWRDEFLIQASPRDPEHFPFVLL 128
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + ++R V K+A WC + + Y+E SAKE N+++AF+ +A AL+ E D
Sbjct: 129 GNKIDLE--ANRAVSAKRAEAWCLSKNKMKYYEVSAKEALNVEQAFIEIARDALQREAHD 186
Query: 188 IYYQPQGISETVSEVEQ----RGGCAC 210
+ P+ + + Q GGC C
Sbjct: 187 VQDFPEFPDQIRLDNRQTSQPSGGCNC 213
>gi|299116473|emb|CBN76190.1| Rab7, RAB family GTPase [Ectocarpus siliculosus]
Length = 213
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 117/193 (60%), Positives = 146/193 (75%), Gaps = 6/193 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLK+I+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TK+ +DDKLVTLQIWD
Sbjct: 4 RRRALLKIIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDTVIDDKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGA+ CVLVYD+ K+FE L +WREEFL QA P + + PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGAEACVLVYDITNPKSFEQLDSWREEFLHQAAPMDPDNFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIP--YFETSAKEDCNIDEAFLCVAEIALKN-- 183
GNK+D + S R V +++AL+WC +G+ P Y ETSAKE ++ AFL V ++AL N
Sbjct: 124 GNKVDRE--SERRVSRQRALQWCKSKGSTPISYIETSAKEAVKVEGAFLEVVQMALINSA 181
Query: 184 EHKDIYYQPQGIS 196
+ Y P+ I+
Sbjct: 182 QQPPEIYVPEPIT 194
>gi|328852304|gb|EGG01451.1| hypothetical protein MELLADRAFT_50103 [Melampsora larici-populina
98AG31]
Length = 228
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 120/226 (53%), Positives = 155/226 (68%), Gaps = 24/226 (10%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD---------- 57
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ ++
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESEPSTSQQVT 63
Query: 58 -----------DKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNW 106
D++VT+Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +W
Sbjct: 64 SQPQHQPNPNSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSSKSFETLDSW 123
Query: 107 REEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKED 166
R+EFL QA P + + PFV+LGNKID + G R V QK+A+ WC +GNIPYFETSAKE
Sbjct: 124 RDEFLIQASPRDPDNFPFVVLGNKIDVEEG-KRQVSQKRAMSWCQSKGNIPYFETSAKES 182
Query: 167 CNIDEAFL--CVAEIALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
N++++F+ C +++ + D + SE +Q GC C
Sbjct: 183 INVEQSFVAACRNALSVGDSMDDGFSDYPDPIMLNSEGQQSYGCGC 228
>gi|53830716|gb|AAU95201.1| putative Rab7 [Oncometopia nigricans]
Length = 206
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 141/179 (78%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F+ L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTSPTSFKDLDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A +W + NIPYFETSAKE N+++AF +A+ AL E +
Sbjct: 124 GNKIDLE---NRAVSAKRAQQWGQLKNNIPYFETSAKEAINVEQAFQTIAKNALAQESE 179
>gi|145487394|ref|XP_001429702.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834393|emb|CAI44533.1| rab_B30 [Paramecium tetraurelia]
gi|124396796|emb|CAK62304.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 235 bits (600), Expect = 7e-60, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 KKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + K+ +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + + ++GGC
Sbjct: 182 EIFFPTTVTLTKQDPKKQTKQGGC 205
>gi|119393797|gb|ABL74414.1| Rab7 [Aedes albopictus]
Length = 208
Score = 235 bits (599), Expect = 9e-60, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQESE 179
>gi|157136642|ref|XP_001663804.1| ras-related protein Rab-7 [Aedes aegypti]
gi|108880990|gb|EAT45215.1| AAEL003503-PA [Aedes aegypti]
Length = 208
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQESE 179
>gi|406602416|emb|CCH46032.1| hypothetical protein BN7_5619 [Wickerhamomyces ciferrii]
Length = 205
Score = 235 bits (599), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 147/203 (72%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLM Q+V KFS QYKATIGADF+TKEL +DDK VT+Q+WD
Sbjct: 4 KKKTLLKVIILGDSGVGKTSLMQQFVNGKFSNQYKATIGADFLTKELTIDDKSVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV QK+FE++ W++EFL QA+ E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTNQKSFENISLWKDEFLIQANVKNPENFPFVII 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D + +V+ KKA ++ GN+P F+TSAKE NID+AF +A AL+ E D
Sbjct: 124 GNKVDVD-ENKKVINNKKAQQFANNLGNLPLFQTSAKEAVNIDQAFDVIARNALQQEEND 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + + + CAC
Sbjct: 183 EFNDEFNDAINIQLDGENNNCAC 205
>gi|240849471|ref|NP_001155484.1| ras-related protein Rab-7-like [Acyrthosiphon pisum]
gi|239791100|dbj|BAH72062.1| ACYPI002607 [Acyrthosiphon pisum]
Length = 209
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 117/209 (55%), Positives = 146/209 (69%), Gaps = 9/209 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV KF+ QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVNKKFTNQYKATIGADFLTKEVMVDDRIVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV +F+SL WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTSPGSFKSLDGWRDEFLIQASPSDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V K+A +WC + +PYFETSAKE N+++AF +A AL E
Sbjct: 124 GNKVDLD---NRAVSTKRAQQWCQSKNGLPYFETSAKEAVNVEQAFKTIARNALAQESDV 180
Query: 188 IYYQ--PQGISETVSEVEQRGG----CAC 210
Y P I + R CAC
Sbjct: 181 ELYNEFPDQIKLDGGSTDNRSSGSDNCAC 209
>gi|126652803|ref|XP_001388379.1| Rab7 GTPase [Cryptosporidium parvum Iowa II]
gi|126117472|gb|EAZ51572.1| Rab7 GTPase, putative [Cryptosporidium parvum Iowa II]
gi|323510277|dbj|BAJ78032.1| cgd7_1680 [Cryptosporidium parvum]
Length = 215
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 123/208 (59%), Positives = 149/208 (71%), Gaps = 7/208 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV +KFS QYKATIGADF+TK++ +D+KLVTLQIWD
Sbjct: 10 RKRVLLKVIILGDSGVGKTSLMNQYVNSKFSTQYKATIGADFLTKDIVIDNKLVTLQIWD 69
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC LVYD+ K+FE L WREEFL QA P + + PFV+L
Sbjct: 70 TAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDPNSFPFVVL 129
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-HK 186
GNK+D D SR V +KA WC + NI YFETSAK N+D AF + AL E +
Sbjct: 130 GNKLDLD-QKSRKVSSQKASAWCKSK-NIEYFETSAKNATNVDAAFEEIGRRALYRETSE 187
Query: 187 DIYYQPQGISETVSEVEQR----GGCAC 210
D Y P+ ++ + + GGC+C
Sbjct: 188 DQVYIPEPLTLNNNNQQHHEIGFGGCSC 215
>gi|170046123|ref|XP_001850628.1| ras-related protein Rab-7 [Culex quinquefasciatus]
gi|167869001|gb|EDS32384.1| ras-related protein Rab-7 [Culex quinquefasciatus]
Length = 208
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 112/179 (62%), Positives = 140/179 (78%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFLTKEVVIDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQESE 179
>gi|156097076|ref|XP_001614571.1| small GTPase Rab7 [Plasmodium vivax Sal-1]
gi|148803445|gb|EDL44844.1| small GTPase Rab7, putative [Plasmodium vivax]
Length = 206
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 141/180 (78%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+R +LKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE +D++ +T+QIWD
Sbjct: 4 KKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNEHLTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL++W++EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPFVII 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V K L+WC NIPYFETSAK N+D+AF +A A+K EH++
Sbjct: 124 GNKVDE--TNKRKVQSLKVLQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQEHQE 181
>gi|47218980|emb|CAG02018.1| unnamed protein product [Tetraodon nigroviridis]
Length = 229
Score = 234 bits (598), Expect = 1e-59, Method: Compositional matrix adjust.
Identities = 116/196 (59%), Positives = 139/196 (70%), Gaps = 19/196 (9%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRV-------------------VPQKKALEWCAYRGNIPYFETSAKEDCN 168
GNKID + V K+A WC + NIPYFETSAKE N
Sbjct: 124 GNKIDLENRQVSPDEAEPAAMVAVTSALLCFQVTTKRAQAWCQSKNNIPYFETSAKEAIN 183
Query: 169 IDEAFLCVAEIALKNE 184
+++AF +A ALK E
Sbjct: 184 VEQAFQTIARNALKQE 199
>gi|430814192|emb|CCJ28537.1| unnamed protein product [Pneumocystis jirovecii]
Length = 205
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/206 (56%), Positives = 151/206 (73%), Gaps = 1/206 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLKVI+LGDSG GKTSL+NQYV KFS QYKATIGADF+TKE+ +DD++VT+Q
Sbjct: 1 MSSRKKVLLKVIILGDSGAGKTSLLNQYVNKKFSNQYKATIGADFLTKEVTVDDRVVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLV+DV K+FE+L +WR+EF QA P + E PF
Sbjct: 61 LWDTAGQERFQSLGVAFYRGADCCVLVFDVTNSKSFETLDSWRDEFFIQASPRDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V LGNKID + S R VPQ +A +C +GN YFETSAKE N+D+AF +A+ L E
Sbjct: 121 VCLGNKIDVE-ESKRTVPQARARTYCESKGNTEYFETSAKECINVDQAFEHIAKTVLSLE 179
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y ++ ++ GC+C
Sbjct: 180 CENDYTGEFLDPIQINLDSEKPGCSC 205
>gi|34559282|gb|AAL08054.2| Rab7a protein [Paramecium octaurelia]
gi|53850820|gb|AAU95464.1| Rab7a protein [Paramecium octaurelia]
gi|210137241|gb|ACJ09042.1| Rab7a1 protein [Paramecium octaurelia]
Length = 206
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 149/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + KA +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + ++GGC
Sbjct: 182 EIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|50556440|ref|XP_505628.1| YALI0F19602p [Yarrowia lipolytica]
gi|49651498|emb|CAG78437.1| YALI0F19602p [Yarrowia lipolytica CLIB122]
Length = 205
Score = 234 bits (597), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 115/203 (56%), Positives = 145/203 (71%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+R +LKV++LGDSGVGK+SLM QYV NKFS QYKATIGADF+ KEL ++ + V +QIWD
Sbjct: 4 KKRTMLKVVILGDSGVGKSSLMQQYVNNKFSTQYKATIGADFLNKELTLEGRKVNMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L WR+EFL A+P + E PFV++
Sbjct: 64 TAGQERFQSLGLAFYRGADCCVLVYDVNNSKSFDALTLWRDEFLLLANPRDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V K+A +C GNIPYFETSAKED +D+AF VA A+ +
Sbjct: 124 GNKVDVE-ESKRAVSAKRAQAFCKATGNIPYFETSAKEDTGVDQAFETVARNAMAQVDSE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y + + ++ CAC
Sbjct: 183 DYTDDFADTINIHLDNEQSNCAC 205
>gi|49473687|gb|AAT66502.1| Rab7b protein [Paramecium octaurelia]
gi|58220836|gb|AAW68046.1| Rab7b protein [Paramecium octaurelia]
Length = 206
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + K+ +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + + ++GGC
Sbjct: 182 EIFFPTTVTLTKQDPKKQTKQGGC 205
>gi|302662118|ref|XP_003022718.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
gi|291186678|gb|EFE42100.1| hypothetical protein TRV_03179 [Trichophyton verrucosum HKI 0517]
Length = 316
Score = 234 bits (596), Expect = 2e-59, Method: Compositional matrix adjust.
Identities = 116/198 (58%), Positives = 148/198 (74%), Gaps = 1/198 (0%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
++VI+LGDSGVGKTSLMNQYV K+S YKATIGAD++TKE+ +D +LVT+QIWDTAGQE
Sbjct: 120 IQVIILGDSGVGKTSLMNQYVNKKYSASYKATIGADYLTKEVMVDGRLVTMQIWDTAGQE 179
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA+ + E+ PFV+LGNKID
Sbjct: 180 RFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQANLRDPESFPFVVLGNKID 239
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
+ S R++ K+A +C +GNIPYFETSAKE N+++AF +A+ AL E + +
Sbjct: 240 VE-ESKRMISSKRASTYCQSKGNIPYFETSAKEAINVEQAFEVIAKSALMQEESEEFNGD 298
Query: 193 QGISETVSEVEQRGGCAC 210
V+ R CAC
Sbjct: 299 FDDVINVNHDSDRDACAC 316
>gi|221054328|ref|XP_002258303.1| Rab7 GTPase [Plasmodium knowlesi strain H]
gi|193808372|emb|CAQ39075.1| Rab7 GTPase, putative [Plasmodium knowlesi strain H]
Length = 206
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 110/180 (61%), Positives = 141/180 (78%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+R +LKVI+LGDSGVGKTSLMNQYV KF+ QYKATIGADF+TKE +D++ +T+QIWD
Sbjct: 4 KKRTILKVIILGDSGVGKTSLMNQYVNKKFTNQYKATIGADFLTKETIVDNENLTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL++W++EFL QA P + + PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLESWKDEFLIQASPKDPDNFPFVII 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V K ++WC NIPYFETSAK N+D+AF +A A+K EH++
Sbjct: 124 GNKVDE--TNKRKVQSLKVMQWCKSNNNIPYFETSAKNAINVDQAFDEIARKAMKQEHQE 181
>gi|320593309|gb|EFX05718.1| rab small monomeric GTPase [Grosmannia clavigera kw1407]
Length = 670
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 111/180 (61%), Positives = 143/180 (79%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLK+I+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKIIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVPVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVN K+FE+++ WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVNNAKSFEAIEGWRDEFLVQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A +C G IPYFETSAKE N+++AF +A+ AL+ E +
Sbjct: 124 GNKIDVE-ESKRVISTKRATTFCQAHG-IPYFETSAKEAINVEQAFEVIAKNALQQEEAE 181
>gi|391336619|ref|XP_003742676.1| PREDICTED: ras-related protein Rab-7a-like [Metaseiulus
occidentalis]
Length = 207
Score = 233 bits (595), Expect = 3e-59, Method: Compositional matrix adjust.
Identities = 120/212 (56%), Positives = 148/212 (69%), Gaps = 17/212 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVIVLGDSGVGKT LMNQ+V KF+ QYKATIGADF TKE+ +D+KL+TLQIWD
Sbjct: 4 RKKVLLKVIVLGDSGVGKTCLMNQFVSKKFTNQYKATIGADFQTKEVMVDNKLITLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG FYRGADCCVLVYDV TF+SL++WR+EFL Q+ P + E PFV++
Sbjct: 64 TAGQERFQSLGVGFYRGADCCVLVYDVTSPTTFKSLESWRDEFLIQSSPKDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA--------EI 179
GNKID + +R + K+A WC + NIPYFE SAKE ++DEAF VA E+
Sbjct: 124 GNKIDLE---NRSITTKRAQSWCQSKNNIPYFEVSAKEALHVDEAFATVARNAQAQENEV 180
Query: 180 ALKNEHKD-IYYQPQGISETVSEVEQRGGCAC 210
L NE D I P S + ++ C C
Sbjct: 181 ELYNEFPDQIKLSPLPTSSS-----RQDNCGC 207
>gi|269972626|emb|CBE66893.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 233 bits (594), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 110/177 (62%), Positives = 142/177 (80%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
>gi|320582172|gb|EFW96390.1| GTP-binding protein [Ogataea parapolymorpha DL-1]
Length = 206
Score = 233 bits (593), Expect = 4e-59, Method: Compositional matrix adjust.
Identities = 112/181 (61%), Positives = 144/181 (79%), Gaps = 1/181 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ +LKVI+LGDSGVGKTSLM Q++ KFSQQYKATIGADF+ K+L +DDK VT+Q
Sbjct: 1 MSTRKKTILKVIILGDSGVGKTSLMQQFINGKFSQQYKATIGADFLPKDLVIDDKQVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRG+DCCVLVYDV K+FE+LQ+W++EFL QA+ + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGSDCCVLVYDVTNTKSFENLQSWKDEFLIQANIKDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNKID + + R+V KKA CA GN+PYFETSAKE N+++AF VA AL+ E
Sbjct: 121 VVIGNKIDVE-ENKRLVSSKKAQSLCASMGNLPYFETSAKEAVNVEQAFDVVARNALQQE 179
Query: 185 H 185
Sbjct: 180 E 180
>gi|440793724|gb|ELR14900.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 205
Score = 233 bits (593), Expect = 5e-59, Method: Compositional matrix adjust.
Identities = 116/203 (57%), Positives = 146/203 (71%), Gaps = 4/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLM++YV K+S QYKATIGADF+TKE+++D KLVTLQIWD
Sbjct: 3 QRRALLKVILLGDSGVGKTSLMDRYVNKKYSAQYKATIGADFLTKEVEVDGKLVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG++FYRGADCC+LV+DV V K+FESL NWR EFL QA G E PFV+L
Sbjct: 63 TAGQERFQSLGNSFYRGADCCILVFDVTVAKSFESLDNWRNEFLVQAAVGGPEHFPFVVL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN--EH 185
GNK+D + R V + WC G++P++ETSAK+ N+D+AF A++A+ E
Sbjct: 123 GNKVDQE--DKRTVSARSGNAWCREHGDVPFYETSAKDATNVDQAFFMAAKLAISRIPEE 180
Query: 186 KDIYYQPQGISETVSEVEQRGGC 208
I E + +GGC
Sbjct: 181 PPIDIPDVKRLNASYEPQPKGGC 203
>gi|308321783|gb|ADO28034.1| ras-related protein rab-7a [Ictalurus furcatus]
Length = 207
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 112/177 (63%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ ++D+LVTLQIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVEDRLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L + R+EFL QA P + + PF++L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPTTFKTLDSGRDEFLIQASPRDPDNFPFLVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + N+PYFETSAKE ++++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCQSKNNMPYFETSAKEAISVEQAFQTIARNALKQE 177
>gi|254574478|ref|XP_002494348.1| GTP-binding protein [Komagataella pastoris GS115]
gi|238034147|emb|CAY72169.1| GTP-binding protein [Komagataella pastoris GS115]
gi|328353835|emb|CCA40232.1| Ras-related protein Rab-7A [Komagataella pastoris CBS 7435]
Length = 205
Score = 232 bits (592), Expect = 6e-59, Method: Compositional matrix adjust.
Identities = 114/178 (64%), Positives = 141/178 (79%), Gaps = 1/178 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ +LKVI+LGDSGVGKTSLM Q+V KFSQQYKATIGADF+TKEL +D+K VT+Q+WD
Sbjct: 4 KKKTILKVIILGDSGVGKTSLMQQFVNRKFSQQYKATIGADFLTKELVIDNKNVTIQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV K+++++ +W++EFL QA+ E PF+L+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTNNKSYDNVVSWKDEFLVQANIKNPETFPFILI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNKID + + R + KKA + CA GNIPYFETSAKE NID+AF VA AL+ E
Sbjct: 124 GNKIDVE-ENKRQINNKKAQQLCAQLGNIPYFETSAKEAVNIDQAFDVVARNALQQEE 180
>gi|325190519|emb|CCA25018.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 488
Score = 232 bits (592), Expect = 7e-59, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLK+ +LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DKLVTLQIWD
Sbjct: 285 RKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQIWD 344
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGAD C+LVYD+ KTF+ L +WR+EFL QA P + +A PF++L
Sbjct: 345 TAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPFLVL 404
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRG---NIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D S R V ++A EWC + + +FETSAKE +++EAF +A IAL+
Sbjct: 405 GNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIALQKG 462
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P+ I + + ++ C
Sbjct: 463 QEEDIYVPETIDLSRARTKKVSSNCC 488
>gi|302830546|ref|XP_002946839.1| RabG/Rab7 [Volvox carteri f. nagariensis]
gi|300267883|gb|EFJ52065.1| RabG/Rab7 [Volvox carteri f. nagariensis]
Length = 181
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV KF+++YKATIGADF+TKE+++DDK VT+QIWDTAGQERFQSLGSAFYRGADCC
Sbjct: 1 MNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQIWDTAGQERFQSLGSAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
+LV+DVN K+F+ L NWR+EF+ QA P + + PFV+LGNKID + G +R V +KKA
Sbjct: 61 MLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPFVVLGNKID-EVGVNRQVTEKKAKA 119
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVE-QRGG 207
WCA +G+IPYFETSAKED N++ AF C+ AL+NE ++ + P + S + +RGG
Sbjct: 120 WCASKGSIPYFETSAKEDINVEAAFTCITRNALRNEKEEELFVPDAVDMNTSATQRKRGG 179
Query: 208 C 208
C
Sbjct: 180 C 180
>gi|325190517|emb|CCA25016.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 510
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLK+ +LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DKLVTLQIWD
Sbjct: 307 RKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQIWD 366
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGAD C+LVYD+ KTF+ L +WR+EFL QA P + +A PF++L
Sbjct: 367 TAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPFLVL 426
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRG---NIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D S R V ++A EWC + + +FETSAKE +++EAF +A IAL+
Sbjct: 427 GNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIALQKG 484
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P+ I + + ++ C
Sbjct: 485 QEEDIYVPETIDLSRARTKKVSSNCC 510
>gi|289743677|gb|ADD20586.1| Ras-related protein Rab-7 [Glossina morsitans morsitans]
Length = 208
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 140/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTS+MNQYV +FS QYKATIGADF TKE+ +DD++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + ++PYFETSAKE N++ AF +A+ AL E
Sbjct: 124 GNKVDMD---NRQVSTRRAQQWCQSKNDLPYFETSAKEGLNVELAFQTIAKNALAQE 177
>gi|325190518|emb|CCA25017.1| Rab7 family GTPase putative [Albugo laibachii Nc14]
Length = 507
Score = 232 bits (591), Expect = 8e-59, Method: Compositional matrix adjust.
Identities = 114/206 (55%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLK+ +LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DKLVTLQIWD
Sbjct: 304 RKKVLLKLTILGDSGVGKTSLMNQYVNQKFSNQYKATIGADFLTKEIVFEDKLVTLQIWD 363
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGAD C+LVYD+ KTF+ L +WR+EFL QA P + +A PF++L
Sbjct: 364 TAGQERFQSLGVAFYRGADACILVYDITNPKTFQKLDSWRDEFLVQAAPRDPDAFPFLVL 423
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRG---NIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D S R V ++A EWC + + +FETSAKE +++EAF +A IAL+
Sbjct: 424 GNKVDRD--SERKVSLERAQEWCESKSLGQTLHHFETSAKESTSVEEAFRTIASIALQKG 481
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P+ I + + ++ C
Sbjct: 482 QEEDIYVPETIDLSRARTKKVSSNCC 507
>gi|195108353|ref|XP_001998757.1| GI24142 [Drosophila mojavensis]
gi|193915351|gb|EDW14218.1| GI24142 [Drosophila mojavensis]
Length = 207
Score = 232 bits (591), Expect = 9e-59, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
>gi|440301863|gb|ELP94249.1| hypothetical protein EIN_186960 [Entamoeba invadens IP1]
Length = 205
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 118/203 (58%), Positives = 146/203 (71%), Gaps = 3/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQ+V +K+S YKATIGADF+TK+L +D+ VT+QIWD
Sbjct: 3 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERFQSLG AFYRGADCC LV+DVN KTF+SL NWR+EFL QA P + PFV+L
Sbjct: 63 TAGNERFQSLGVAFYRGADCCALVHDVNDPKTFDSLNNWRDEFLVQAQPKNTDQFPFVVL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALKNEH 185
GNKID+ GS + KK+ +WC+ NIP+FETSAK N+D AF +A+ IA K
Sbjct: 123 GNKIDSYDGSVDAI-HKKSEQWCSEHFNIPFFETSAKNATNVDLAFQSIAQAAIAQKGTD 181
Query: 186 KDIYYQPQGISETVSEVEQRGGC 208
DIY Q + + E + C
Sbjct: 182 TDIYVMNQVNIDQPAPQETKTDC 204
>gi|209879788|ref|XP_002141334.1| Rab7 GTPase protein [Cryptosporidium muris RN66]
gi|209556940|gb|EEA06985.1| Rab7 GTPase protein, putative [Cryptosporidium muris RN66]
Length = 213
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 121/206 (58%), Positives = 149/206 (72%), Gaps = 5/206 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ +D+KLVTLQIWD
Sbjct: 10 RKRVLLKVIILGDSGVGKTSLMNQYVNKKFSMQYKATIGADFLTKDIVIDNKLVTLQIWD 69
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC LVYD+ K+F+ L+ WREEFL QA P + PFV++
Sbjct: 70 TAGQERFQSLGVAFYRGADCCALVYDMTNPKSFDGLEAWREEFLIQAAPKDPNCFPFVVI 129
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D SR V ++AL WC + +I YFETSAK N+DEAF + AL E D
Sbjct: 130 GNKLDLD-QKSRKVSSQRALAWCKGK-HIQYFETSAKNATNVDEAFEEIGRRALSRETTD 187
Query: 188 -IYYQPQGISETVSEVEQRG--GCAC 210
Y P+ ++ ++ G GC+C
Sbjct: 188 EQAYFPEPLTLNNQNQQEFGLSGCSC 213
>gi|195037102|ref|XP_001990004.1| GH18481 [Drosophila grimshawi]
gi|193894200|gb|EDV93066.1| GH18481 [Drosophila grimshawi]
Length = 207
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
>gi|195392371|ref|XP_002054831.1| GJ24655 [Drosophila virilis]
gi|194152917|gb|EDW68351.1| GJ24655 [Drosophila virilis]
Length = 207
Score = 231 bits (590), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
>gi|195144966|ref|XP_002013467.1| GL23391 [Drosophila persimilis]
gi|198477435|ref|XP_002136615.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
gi|194102410|gb|EDW24453.1| GL23391 [Drosophila persimilis]
gi|198142907|gb|EDY71619.1| GA29225 [Drosophila pseudoobscura pseudoobscura]
Length = 207
Score = 231 bits (589), Expect = 1e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALEQE 177
>gi|269972612|emb|CBE66886.1| CG5915-PA [Drosophila ananassae]
Length = 207
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
>gi|194742714|ref|XP_001953846.1| GF17031 [Drosophila ananassae]
gi|190626883|gb|EDV42407.1| GF17031 [Drosophila ananassae]
gi|269972614|emb|CBE66887.1| CG5915-PA [Drosophila ananassae]
gi|269972616|emb|CBE66888.1| CG5915-PA [Drosophila ananassae]
gi|269972618|emb|CBE66889.1| CG5915-PA [Drosophila ananassae]
gi|269972620|emb|CBE66890.1| CG5915-PA [Drosophila ananassae]
gi|269972622|emb|CBE66891.1| CG5915-PA [Drosophila ananassae]
gi|269972624|emb|CBE66892.1| CG5915-PA [Drosophila ananassae]
gi|269972628|emb|CBE66894.1| CG5915-PA [Drosophila ananassae]
gi|269972630|emb|CBE66895.1| CG5915-PA [Drosophila ananassae]
gi|269972632|emb|CBE66896.1| CG5915-PA [Drosophila ananassae]
gi|269972634|emb|CBE66897.1| CG5915-PA [Drosophila ananassae]
gi|269973057|emb|CBE67073.1| CG5915-PA [Drosophila phaeopleura]
Length = 207
Score = 231 bits (588), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVELAFQTIAKNALEQE 177
>gi|70997379|ref|XP_753438.1| Rab small monomeric GTPase Rab7 [Aspergillus fumigatus Af293]
gi|66851074|gb|EAL91400.1| Rab small monomeric GTPase Rab7, putative [Aspergillus fumigatus
Af293]
Length = 171
Score = 230 bits (587), Expect = 2e-58, Method: Compositional matrix adjust.
Identities = 110/166 (66%), Positives = 136/166 (81%), Gaps = 5/166 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+TKE+ +DD+L IWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTKEVLVDDRL----IWD 59
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + E+ PFV++
Sbjct: 60 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPESFPFVVI 119
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF
Sbjct: 120 GNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAF 164
>gi|296420204|ref|XP_002839665.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635859|emb|CAZ83856.1| unnamed protein product [Tuber melanosporum]
Length = 202
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 117/203 (57%), Positives = 147/203 (72%), Gaps = 5/203 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R+ LKVI+LGDSGVGKTSLMNQYV FS YKATIGADF+TK++ +DD+LVTL +WDT
Sbjct: 4 RKKFLKVIILGDSGVGKTSLMNQYVNKVFSVSYKATIGADFLTKDVMVDDRLVTLTLWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+LG
Sbjct: 64 AGQERFQSLGVAFYRGADCCVLVYDVNNAKSFDNLNSWRDEFLIQASPRDPDTFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NKID D S R V K+A +C +G +P+FE SAK+ N++ AF +A AL + +I
Sbjct: 124 NKIDVD-ESKRRVSNKRAQAYCLSKGQLPHFECSAKDGANVEVAFEAIARQALAQDESEI 182
Query: 189 -YYQPQGISETVSEVEQRGGCAC 210
Y+ P T +E GC+C
Sbjct: 183 DYFDP--TVNTGFPIES-DGCSC 202
>gi|195452908|ref|XP_002073553.1| GK14177 [Drosophila willistoni]
gi|194169638|gb|EDW84539.1| GK14177 [Drosophila willistoni]
Length = 207
Score = 230 bits (587), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 139/177 (78%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRNPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQTIAKNALDQE 177
>gi|428672346|gb|EKX73260.1| Ras-related protein Rab7 small GTP-binging protein [Babesia equi]
Length = 215
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 140/180 (77%), Gaps = 2/180 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R +LK+I+LGDSGVGKTSLMNQ++ KF+ QY+ATIGADF+T+E+ +DDK VTLQIWD
Sbjct: 3 RKRPILKIIILGDSGVGKTSLMNQFINKKFTNQYRATIGADFLTQEMTVDDKEVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYD QKTFES+++W+ EFL Q +P + ++ PF L+
Sbjct: 63 TAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESVESWKSEFLIQVEPKDPDSFPFALI 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKI D ++R V KAL WC NIP+FETSAK N+ AF+ +A+ A+ + +D
Sbjct: 123 GNKI--DDTANRKVSSNKALTWCKANNNIPHFETSAKTAHNVVSAFVEIAKRAIMRDTQD 180
>gi|218188956|gb|EEC71383.1| hypothetical protein OsI_03499 [Oryza sativa Indica Group]
Length = 288
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 136/285 (47%), Positives = 162/285 (56%), Gaps = 83/285 (29%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQ---------------YVYNKFSQQYKATIGADFVTK 52
+RR LLKVIVLGDSGVGKTSLMNQ YV+ KFSQQYKATIGADFVTK
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQFTAVVGTLICLTLVRYVHKKFSQQYKATIGADFVTK 64
Query: 53 ELQMDDKLVTLQIWDTAGQERFQSLGSAFYR----------------------------- 83
E+ ++D+LVTLQIWDTAGQERFQSLG AFYR
Sbjct: 65 EVLIEDRLVTLQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNSNRSFDTLNTWHDEFLN 124
Query: 84 -------GADCCVLVYDVNVQKTFESLQNWR--------------EEFL----------- 111
GA VL ++ FE ++ R E L
Sbjct: 125 QHILLLLGAQGAVLTASSELEDQFEIFKHIRVFNVTTVTSTNTKDETLLLWSGFLLKDEG 184
Query: 112 -----KQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKED 166
K A P + + PF+LLGNKID DGG SRVV +KKA+EWC+ +GNIPYFETSAKED
Sbjct: 185 ESATCKPASPSDPKTFPFILLGNKIDVDGGKSRVVSEKKAMEWCSSKGNIPYFETSAKED 244
Query: 167 CNIDEAFLCVAEIALKNEH-KDIYYQPQGISETVSEVEQRGGCAC 210
N+D AFL VA++AL++E +DIY+Q + + V E EQR GCAC
Sbjct: 245 RNVDSAFLSVAKLALEHERDQDIYFQTV-VPDPVPEAEQRSGCAC 288
>gi|194910038|ref|XP_001982062.1| GG11243 [Drosophila erecta]
gi|195504976|ref|XP_002099310.1| GE23436 [Drosophila yakuba]
gi|190656700|gb|EDV53932.1| GG11243 [Drosophila erecta]
gi|194185411|gb|EDW99022.1| GE23436 [Drosophila yakuba]
Length = 207
Score = 230 bits (586), Expect = 3e-58, Method: Compositional matrix adjust.
Identities = 109/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 177
>gi|331240467|ref|XP_003332884.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|331240475|ref|XP_003332888.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311874|gb|EFP88465.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|309311878|gb|EFP88469.1| Ras-like protein Rab7 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 237
Score = 229 bits (585), Expect = 4e-58, Method: Compositional matrix adjust.
Identities = 118/235 (50%), Positives = 155/235 (65%), Gaps = 33/235 (14%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD---------- 57
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ ++
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVYIESNDSTTQPSS 63
Query: 58 --------------------DKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQ 97
D++VT+Q+WDTAGQERFQSLG AFYRGADCCVLV+DVN
Sbjct: 64 TNPQQAPSSSVVSTNTNNGSDRVVTMQLWDTAGQERFQSLGVAFYRGADCCVLVFDVNSS 123
Query: 98 KTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIP 157
K+FE+L +WR+EFL QA P + + PFV+LGNKID + + R V QK+A+ WC +GNIP
Sbjct: 124 KSFETLDSWRDEFLIQASPRDPDNFPFVVLGNKIDVE-ENKRQVSQKRAMSWCQSKGNIP 182
Query: 158 YFETSAKEDCNIDEAFL--CVAEIALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
YFETSAKE N++++F+ C +++ + D + SE +Q GC C
Sbjct: 183 YFETSAKESINVEQSFIAACRNALSVGDSMDDGFADYPDPIMLNSEGQQSYGCGC 237
>gi|289743679|gb|ADD20587.1| Rab protein 7 [Glossina morsitans morsitans]
Length = 208
Score = 229 bits (585), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 110/183 (60%), Positives = 141/183 (77%), Gaps = 3/183 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTS+MNQYV +FS QYKATIGADF TKE+ +DD++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSIMNQYVSKRFSNQYKATIGADFCTKEVVLDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDWWRDEFLIQASPRDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D +R V ++A +WC + ++PYFETSAKE N++ AF +A+ AL E +
Sbjct: 124 GNKVDMD---NRQVSTRRAQQWCQSKNDLPYFETSAKEGLNVELAFQTIAKNALAQEAEG 180
Query: 188 IYY 190
Y
Sbjct: 181 ELY 183
>gi|242088625|ref|XP_002440145.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
gi|241945430|gb|EES18575.1| hypothetical protein SORBIDRAFT_09g026820 [Sorghum bicolor]
Length = 170
Score = 229 bits (584), Expect = 5e-58, Method: Compositional matrix adjust.
Identities = 118/206 (57%), Positives = 144/206 (69%), Gaps = 39/206 (18%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
+ +RR LLKVIVLGDSG YV KFSQQYKATIGADF+TKE+ + D+LVTLQI
Sbjct: 3 SWRRRTLLKVIVLGDSG---------YVSKKFSQQYKATIGADFLTKEVLIGDRLVTLQI 53
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVLVYDVN +++F +L W +EFL Q
Sbjct: 54 WDTAGQERFQSLGVAFYRGADCCVLVYDVNAKRSFNTLNTWHDEFLNQ------------ 101
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
V +KKA EWCA +G+IPYFETSAKED N+D AFLC+A++AL++EH
Sbjct: 102 ---------------VSEKKAREWCASKGDIPYFETSAKEDHNVDTAFLCIAKLALEHEH 146
Query: 186 -KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY++ ++E V + EQ GGCAC
Sbjct: 147 DQDIYFKT--VAEQVPDTEQTGGCAC 170
>gi|119393799|gb|ABL74415.1| Rab7 [Aedes pseudoscutellaris]
Length = 208
Score = 229 bits (583), Expect = 7e-58, Method: Compositional matrix adjust.
Identities = 110/179 (61%), Positives = 138/179 (77%), Gaps = 3/179 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF+TKE+ +DD++VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVTKRFSNQYKATIGADFLTKEVVIDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQ LG AFYRGADC VLVYD TF++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQLLGVAFYRGADCYVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ AL E +
Sbjct: 124 GNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQESE 179
>gi|237835873|ref|XP_002367234.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|211964898|gb|EEB00094.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221506090|gb|EEE31725.1| ehrab7g protein, putative [Toxoplasma gondii VEG]
Length = 432
Score = 229 bits (583), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 152/208 (73%), Gaps = 9/208 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ +DDK VT+QIWD
Sbjct: 226 KKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQIWD 285
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV K+FESLQ+W+EEFL Q+ P + ++ PFV++
Sbjct: 286 TAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPFVVV 345
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGN-IPYFETSAKEDCNIDEAFLCVAEIA-LKNEH 185
GNK+D R V KA +C GN IPYFETSAK N+ AF +A+ A L+ +
Sbjct: 346 GNKVDER--EKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQEKQ 403
Query: 186 KDIYYQPQGISET-----VSEVEQRGGC 208
++ Y P+ ++ + + ++ GGC
Sbjct: 404 QEQIYLPETLTLSNADIRPAPIDSSGGC 431
>gi|221484856|gb|EEE23146.1| rab9, putative [Toxoplasma gondii GT1]
Length = 432
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 152/208 (73%), Gaps = 9/208 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ +DDK VT+QIWD
Sbjct: 226 KKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQIWD 285
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV K+FESLQ+W+EEFL Q+ P + ++ PFV++
Sbjct: 286 TAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPSDPDSFPFVVV 345
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGN-IPYFETSAKEDCNIDEAFLCVAEIA-LKNEH 185
GNK+D R V KA +C GN IPYFETSAK N+ AF +A+ A L+ +
Sbjct: 346 GNKVDER--EKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQEKQ 403
Query: 186 KDIYYQPQGISET-----VSEVEQRGGC 208
++ Y P+ ++ + + ++ GGC
Sbjct: 404 QEQIYLPETLTLSNADIRPAPIDSSGGC 431
>gi|17865835|ref|NP_524472.1| Rab7, isoform A [Drosophila melanogaster]
gi|386766374|ref|NP_001247276.1| Rab7, isoform B [Drosophila melanogaster]
gi|386766376|ref|NP_001247277.1| Rab7, isoform C [Drosophila melanogaster]
gi|8118580|gb|AAF73041.1|AF263363_1 small ras-like GTPase RAB7 [Drosophila melanogaster]
gi|3426326|gb|AAC32270.1| small ras-like GTPase [Drosophila melanogaster]
gi|6561905|dbj|BAA88245.1| Rab7 protein [Drosophila melanogaster]
gi|7301083|gb|AAF56218.1| Rab7, isoform A [Drosophila melanogaster]
gi|16648020|gb|AAL25275.1| GH03685p [Drosophila melanogaster]
gi|116806766|emb|CAL26809.1| CG5915 [Drosophila melanogaster]
gi|116806768|emb|CAL26810.1| CG5915 [Drosophila melanogaster]
gi|116806770|emb|CAL26811.1| CG5915 [Drosophila melanogaster]
gi|116806772|emb|CAL26812.1| CG5915 [Drosophila melanogaster]
gi|116806774|emb|CAL26813.1| CG5915 [Drosophila melanogaster]
gi|116806776|emb|CAL26814.1| CG5915 [Drosophila melanogaster]
gi|116806778|emb|CAL26815.1| CG5915 [Drosophila melanogaster]
gi|116806780|emb|CAL26816.1| CG5915 [Drosophila melanogaster]
gi|116806782|emb|CAL26817.1| CG5915 [Drosophila melanogaster]
gi|116806784|emb|CAL26818.1| CG5915 [Drosophila melanogaster]
gi|116806786|emb|CAL26819.1| CG5915 [Drosophila melanogaster]
gi|220944908|gb|ACL84997.1| Rab7-PA [synthetic construct]
gi|220954800|gb|ACL89943.1| Rab7-PA [synthetic construct]
gi|223967661|emb|CAR93561.1| CG5915-PA [Drosophila melanogaster]
gi|223967663|emb|CAR93562.1| CG5915-PA [Drosophila melanogaster]
gi|223967665|emb|CAR93563.1| CG5915-PA [Drosophila melanogaster]
gi|223967667|emb|CAR93564.1| CG5915-PA [Drosophila melanogaster]
gi|223967669|emb|CAR93565.1| CG5915-PA [Drosophila melanogaster]
gi|223967671|emb|CAR93566.1| CG5915-PA [Drosophila melanogaster]
gi|223967673|emb|CAR93567.1| CG5915-PA [Drosophila melanogaster]
gi|223967675|emb|CAR93568.1| CG5915-PA [Drosophila melanogaster]
gi|223967677|emb|CAR93569.1| CG5915-PA [Drosophila melanogaster]
gi|223967679|emb|CAR93570.1| CG5915-PA [Drosophila melanogaster]
gi|223967681|emb|CAR93571.1| CG5915-PA [Drosophila melanogaster]
gi|294661911|gb|ADF28796.1| MIP21169p [Drosophila melanogaster]
gi|383292915|gb|AFH06594.1| Rab7, isoform B [Drosophila melanogaster]
gi|383292916|gb|AFH06595.1| Rab7, isoform C [Drosophila melanogaster]
Length = 207
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQYV +FS QYKATIGADF TKE+ ++D++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYVNKRFSNQYKATIGADFCTKEVVVNDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 124 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 177
>gi|403222812|dbj|BAM40943.1| Ras-related GTPase [Theileria orientalis strain Shintoku]
Length = 215
Score = 228 bits (582), Expect = 8e-58, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 145/201 (72%), Gaps = 3/201 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+++LK+I+LGDSGVGKTSLMNQ++ +F+ QY+ATIGADF+T E+ +DDK VTLQIWD
Sbjct: 3 RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYD QKTFES+++W+ EFL Q DP + ++ PF L+
Sbjct: 63 TAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPFALV 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA-LKNEHK 186
GNKI D ++ V KAL WC +IP+FETSAK N+ AF +A+ A +++
Sbjct: 123 GNKI--DDVENKKVSTNKALSWCKANNDIPHFETSAKTSHNVTNAFNEIAKRAIIRDNQD 180
Query: 187 DIYYQPQGISETVSEVEQRGG 207
D Y P + V+Q G
Sbjct: 181 DEVYIPDTLLLDQRNVQQVSG 201
>gi|399218383|emb|CCF75270.1| unnamed protein product [Babesia microti strain RI]
Length = 210
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 143/205 (69%), Gaps = 8/205 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M +R +LK ++LGDSGVGKTSLMNQYV KFS QY+ATIGADF++KE +D+K +TLQIW
Sbjct: 1 MSQRAMLKTVILGDSGVGKTSLMNQYVNKKFSNQYRATIGADFLSKETVVDNKQITLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGAD C+LVYD K+FE++ NW++EFL+QA+P + + PFVL
Sbjct: 61 DTAGQERFQSLGVAFYRGADSCILVYDTTSLKSFENIDNWKKEFLEQAEPKDPDTFPFVL 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK D VP + A+ WC G I +FETSAK N+ EAF V AL+ ++
Sbjct: 121 LGNKADD------TVPLQSAINWCKVNGEITHFETSAKNSTNVQEAFENVTRRALQRDNA 174
Query: 187 DI-YYQPQGISETVSEVEQRGGCAC 210
D Y P +S T V RGG C
Sbjct: 175 DDEIYIPDTLSLTHDYVP-RGGRGC 198
>gi|312285796|gb|ADQ64588.1| hypothetical protein [Bactrocera oleae]
Length = 208
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 107/177 (60%), Positives = 138/177 (77%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQY+ +FS QYKATIGADF TKE+ DD++VT+QIWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQYINKRFSNQYKATIGADFCTKEVIADDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTSPNSFKNLDSWRDEFLIQASPRDPDHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + ++PYFETSAK+ N++ AF +A AL E
Sbjct: 124 GNKVDMD---NRQVSTRRAQQWCQSKNDMPYFETSAKDGTNVELAFQTIARNALAQE 177
>gi|85001291|ref|XP_955364.1| Ras-related gtpase [Theileria annulata strain Ankara]
gi|65303510|emb|CAI75888.1| Ras-related gtpase, putative [Theileria annulata]
Length = 215
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 110/201 (54%), Positives = 145/201 (72%), Gaps = 3/201 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R+++LK+I+LGDSGVGKTSLMNQ++ +F+ QY+ATIGADF+T E+ +DDK VTLQIWD
Sbjct: 3 RRKSILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFLTMEMTVDDKEVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYD QKTFES+++W+ EFL Q DP + ++ PF L+
Sbjct: 63 TAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVDPKDPDSFPFALI 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA-LKNEHK 186
GNKI D ++ V KAL WC +IP+FETSAK N+ AF +A+ A L++
Sbjct: 123 GNKI--DDVENKKVSTNKALSWCKANNDIPHFETSAKTSLNVANAFNEIAKKAILRDIQD 180
Query: 187 DIYYQPQGISETVSEVEQRGG 207
D Y P + V++ G
Sbjct: 181 DEVYIPDTLLLDQRNVQRSSG 201
>gi|401413308|ref|XP_003886101.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
gi|325120521|emb|CBZ56075.1| hypothetical protein NCLIV_065010 [Neospora caninum Liverpool]
Length = 210
Score = 228 bits (581), Expect = 1e-57, Method: Compositional matrix adjust.
Identities = 118/208 (56%), Positives = 152/208 (73%), Gaps = 9/208 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TK++ +DDK VT+QIWD
Sbjct: 4 KKKALLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTVQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV K+FESLQ+W+EEFL Q+ P + ++ PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFESLQSWKEEFLIQSSPADPDSFPFVVV 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGN-IPYFETSAKEDCNIDEAFLCVAEIA-LKNEH 185
GNK+D R V KA +C GN IPYFETSAK N+ AF +A+ A L+ +
Sbjct: 124 GNKVDER--EKRRVSSSKAEAFCRQSGNDIPYFETSAKTATNVHLAFEEIAKRAMLQEKQ 181
Query: 186 KDIYYQPQGISET-----VSEVEQRGGC 208
++ Y P+ ++ + + ++ GGC
Sbjct: 182 QEQIYLPETLTLSNPDIRPAPIDSSGGC 209
>gi|156087801|ref|XP_001611307.1| Rab7 [Babesia bovis]
gi|154798561|gb|EDO07739.1| Rab7 [Babesia bovis]
Length = 233
Score = 227 bits (578), Expect = 2e-57, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 145/200 (72%), Gaps = 3/200 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R +LK+I+LGDSGVGKTSLMNQ++ +F+ QY+ATIGADF T+E+ +DDK+VTLQIWD
Sbjct: 21 RKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIWD 80
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYD QKTFES+++W+ EFL Q +P + E+ PF L+
Sbjct: 81 TAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFALI 140
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA-LKNEHK 186
GNK+ D ++R V KA WC +IP+FETSAK N+ AF+ +A+ A +++
Sbjct: 141 GNKV--DDVANRKVSANKATNWCKANNDIPHFETSAKTAQNVAAAFMEIAKKAVMRDTQD 198
Query: 187 DIYYQPQGISETVSEVEQRG 206
D Y P + V+ G
Sbjct: 199 DEIYIPDTLLLDQRHVQHTG 218
>gi|32492056|gb|AAP85300.1| Rab7 [Babesia bovis]
Length = 215
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 108/200 (54%), Positives = 145/200 (72%), Gaps = 3/200 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R +LK+I+LGDSGVGKTSLMNQ++ +F+ QY+ATIGADF T+E+ +DDK+VTLQIWD
Sbjct: 3 RKRPILKIIILGDSGVGKTSLMNQFINKRFTNQYRATIGADFSTQEVTVDDKVVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCC+LVYD QKTFES+++W+ EFL Q +P + E+ PF L+
Sbjct: 63 TAGQERFQSLGKAFYRGADCCMLVYDTTNQKTFESIESWKSEFLIQVEPKDPESFPFALI 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA-LKNEHK 186
GNK+ D ++R V KA WC +IP+FE SAK N+ AF+ +A+ A +++
Sbjct: 123 GNKV--DDVANRKVSANKATNWCKANNDIPHFEASAKTAQNVAAAFMEIAKKAVMRDTQD 180
Query: 187 DIYYQPQGISETVSEVEQRG 206
D Y P + V+Q G
Sbjct: 181 DEIYIPDTLLLDQRHVQQTG 200
>gi|440802977|gb|ELR23891.1| Ras-related protein Rab-7A [Acanthamoeba castellanii str. Neff]
gi|440803579|gb|ELR24469.1| rasrelated protein Rab-7, putative [Acanthamoeba castellanii str.
Neff]
Length = 186
Score = 227 bits (578), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 120/207 (57%), Positives = 145/207 (70%), Gaps = 22/207 (10%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++ LLK+I+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDKLVTLQ
Sbjct: 1 MSTRKKVLLKIIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDKLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGAD CVLV+DVN A P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADACVLVFDVN------------------AGPRDPETFPF 102
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
++LGNKID + SSRVV QK+A WC +GNIPYFETSAKE N+++AF +A+ A+K E
Sbjct: 103 IVLGNKIDLE--SSRVVSQKRAQTWCQSKGNIPYFETSAKEAINVEQAFQTIAKNAMKEE 160
Query: 185 HK-DIYYQPQGISETVSEVEQRGGCAC 210
D+ I SE Q GC+C
Sbjct: 161 EDVDLAGITDAIQLDKSEPSQ-SGCSC 186
>gi|2350954|dbj|BAA22004.1| Ras-related protein RAB7 [Entamoeba histolytica]
Length = 169
Score = 226 bits (577), Expect = 3e-57, Method: Compositional matrix adjust.
Identities = 110/170 (64%), Positives = 131/170 (77%), Gaps = 1/170 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQ+V +K+S YKATIGADF+TK+L +D+ VT+QIWD
Sbjct: 1 KKKILLKVIILGDSGVGKTSLMNQFVNHKYSSVYKATIGADFLTKDLVVDNHEVTMQIWD 60
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERFQSLG AFYRGADCC L YDVN KTFESL NWREEFL QA P + PFV+L
Sbjct: 61 TAGNERFQSLGVAFYRGADCCALCYDVNDPKTFESLNNWREEFLVQASPKNQDQFPFVVL 120
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
GNK+DT GS + +KKA +WC+ NIP+FETSAK N+D F +
Sbjct: 121 GNKVDTYEGSPDAI-KKKAEQWCSEHFNIPFFETSAKNATNVDAGFQSIG 169
>gi|403218485|emb|CCK72975.1| hypothetical protein KNAG_0M01220 [Kazachstania naganishii CBS
8797]
Length = 207
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 107/183 (58%), Positives = 137/183 (74%), Gaps = 1/183 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DDK+ T+Q
Sbjct: 1 MSFRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCVLVYDV K+FE+++ W++EFL A+ E PF
Sbjct: 61 VWDTAGQERFQSLGVAFYRGADCCVLVYDVTNNKSFENIKTWKDEFLVHANVSSPETFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK+D + V P K A E GNIP F TSAK N+D AF +A AL+
Sbjct: 121 VILGNKVDVEESKKLVTP-KAAQELATSLGNIPLFLTSAKSAINVDTAFEEIARSALQQN 179
Query: 185 HKD 187
D
Sbjct: 180 QND 182
>gi|323447751|gb|EGB03662.1| hypothetical protein AURANDRAFT_59604 [Aureococcus anophagefferens]
Length = 207
Score = 225 bits (574), Expect = 8e-57, Method: Compositional matrix adjust.
Identities = 115/205 (56%), Positives = 148/205 (72%), Gaps = 8/205 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKT+LMNQYV +FS YKATIGADF+TKE+ +DD KLVTLQIW
Sbjct: 3 RKKVLLKVIILGDSGVGKTALMNQYVNKRFSASYKATIGADFLTKEVMIDDDKLVTLQIW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGAD C+LVYD+ K+F++L +WREEFL QA P + E PF++
Sbjct: 63 DTAGQERFQSLGVAFYRGADACILVYDITQPKSFDNLDSWREEFLVQASPPDIENFPFIV 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIP--YFETSAKEDCNIDEAFLCVAEIALKNE 184
LGNK+D + + R V + KA WC + + P YFETSAKE ++ AF A++AL E
Sbjct: 123 LGNKVDRE--NDRRVSKAKAHSWCKSKSSAPLQYFETSAKEAVQVEAAFQEAAQLALSQE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCA 209
+ + + P+ I+ V GG A
Sbjct: 181 NTEADFLPETINLGVPSA---GGVA 202
>gi|117939081|dbj|BAF36694.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 224 bits (571), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 109/171 (63%), Positives = 133/171 (77%), Gaps = 2/171 (1%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
KV+VLGDSGVGKT L+NQ+ NKFS QYKATIGADF+TKE+ +D++ VT+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
FQSLG AFYRGAD C+LVYDV KTFE+L W+EEFL Q P + + PF+LLGNKID
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+ SRVV KKA WC +G+I YFETSAK++ N+++AFL +A I L E
Sbjct: 121 E--ESRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSRE 169
>gi|255712835|ref|XP_002552700.1| KLTH0C11132p [Lachancea thermotolerans]
gi|238934079|emb|CAR22262.1| KLTH0C11132p [Lachancea thermotolerans CBS 6340]
Length = 208
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +KFSQQYKATIGADF+TKE+ MD DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKFSQQYKATIGADFLTKEVTMDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVSSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK+D + S +VV + A + GNIP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKLDVE-ESKKVVSNRSAQDMAKSLGNIPLFLTSAKGSINVDTAFEEIARNALQQSQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|117939031|dbj|BAF36669.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939033|dbj|BAF36670.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939035|dbj|BAF36671.1| Small G Protein RAB [Pyrsonympha grandis]
gi|117939037|dbj|BAF36672.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 195
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 113/199 (56%), Positives = 143/199 (71%), Gaps = 7/199 (3%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
KV+VLGDSGVGKT L+NQ+ NKFS QYKATIGADF+TKE+ +D++ VT+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
FQSLG AFYRGAD C+LVYDV KTF++L W+EEFL Q P + + PF+LLGNKID
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK--DIYYQ 191
+ RVV KKA WC +G+I YFETSAK++ N+++AFL +A I L E + DI
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSRESQEDDIPTS 178
Query: 192 PQGISETVSEVEQRGGCAC 210
I+E + + + C C
Sbjct: 179 SIAIAE---DTKPKSKCPC 194
>gi|254579991|ref|XP_002495981.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
gi|238938872|emb|CAR27048.1| ZYRO0C07700p [Zygosaccharomyces rouxii]
Length = 207
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 107/180 (59%), Positives = 137/180 (76%), Gaps = 1/180 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DDK+ T+Q+WD
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDKVATMQVWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLVHANVLSPETFPFVIL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S + V K A E GN+P F TSAK N+D AF +A AL+ D
Sbjct: 124 GNKVDVE-ESKKTVSVKSAQELAKSLGNVPLFLTSAKNAINVDTAFEEIARSALQQNQAD 182
>gi|357017283|gb|AET50670.1| hypothetical protein [Eimeria tenella]
Length = 207
Score = 223 bits (569), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 116/207 (56%), Positives = 151/207 (72%), Gaps = 10/207 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+++LLKVI+LGDS VGKTSLMNQYV KFS QYKATIGADF+TK++ +DDK VT+QIWD
Sbjct: 4 KKKSLLKVIILGDSSVGKTSLMNQYVNKKFSNQYKATIGADFLTKDVVIDDKEVTIQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV K+F+SL++W++EFL Q+ P + +A PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTNPKSFDSLESWKDEFLIQSSPADPDAFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK- 186
GNK+D R V KA +C + I YFETSAK+ N+ AF +A A+++E K
Sbjct: 124 GNKVDEK--EKRRVSAAKAEAFCGSK--ISYFETSAKQAINVSAAFEEIARKAMQHETKQ 179
Query: 187 DIYYQPQGISETVSE-----VEQRGGC 208
+ Y P+ ++ + E V+ GGC
Sbjct: 180 EQIYLPETLTLSNQEIRPQHVQTSGGC 206
>gi|156844455|ref|XP_001645290.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
gi|156115950|gb|EDO17432.1| hypothetical protein Kpol_1037p28 [Vanderwaltozyma polyspora DSM
70294]
Length = 208
Score = 223 bits (568), Expect = 3e-56, Method: Compositional matrix adjust.
Identities = 109/181 (60%), Positives = 139/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++N+LKVIVLGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DD K T+Q+W
Sbjct: 4 RKKNILKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDDDKAATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKSWRDEFLIHANVSSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S ++V QK A E G++P F TSAK N+D+AF +A AL+
Sbjct: 124 LGNKIDVE-DSKKIVTQKSAQELAKELGDVPLFLTSAKNAINVDQAFEEIARSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|340501803|gb|EGR28543.1| rab gtpase, putative [Ichthyophthirius multifiliis]
Length = 209
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 103/166 (62%), Positives = 131/166 (78%), Gaps = 2/166 (1%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N KR+ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQI
Sbjct: 3 NTKRKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVLVYD+ +K+FESL++W+EEF +Q P + + PFV
Sbjct: 63 WDTAGQERFQSLGGAFYRGADCCVLVYDITNKKSFESLESWKEEFKQQGQPKDPDNFPFV 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDE 171
+LGNK D S R V A +WC G++ FETSAKED N+++
Sbjct: 123 VLGNKCDR--ASERKVESDFASQWCKSHGDLLNFETSAKEDTNVNQ 166
>gi|45185690|ref|NP_983406.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|44981445|gb|AAS51230.1| ACR003Cp [Ashbya gossypii ATCC 10895]
gi|374106612|gb|AEY95521.1| FACR003Cp [Ashbya gossypii FDAG1]
Length = 208
Score = 222 bits (566), Expect = 6e-56, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 141/181 (77%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E+ PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENVKSWRDEFLVHANVPSPESFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S +VV + + E GNIP+F TSAK N+D+AF +A AL+
Sbjct: 124 LGNKIDVE-ESKKVVTTRTSQELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQQSQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|363750286|ref|XP_003645360.1| hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888994|gb|AET38543.1| Hypothetical protein Ecym_3028 [Eremothecium cymbalariae
DBVPG#7215]
Length = 208
Score = 222 bits (566), Expect = 7e-56, Method: Compositional matrix adjust.
Identities = 108/184 (58%), Positives = 141/184 (76%), Gaps = 2/184 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTL 63
++ +++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+
Sbjct: 1 MSSRKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDV K+FE+++ WR+EFL A+ E P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNSKSFENIKAWRDEFLVHANVPSPETFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNKID + S +VV + + E GNIP+F TSAK N+D+AF +A AL+
Sbjct: 121 FVILGNKIDVE-ESKKVVTTRSSQELAKSLGNIPFFLTSAKNAINVDDAFEEIARSALQQ 179
Query: 184 EHKD 187
D
Sbjct: 180 SQAD 183
>gi|117939025|dbj|BAF36666.1| Small G Protein RAB [Trichonympha agilis]
gi|117939027|dbj|BAF36667.1| Small G Protein RAB [Trichonympha agilis]
gi|117939029|dbj|BAF36668.1| Small G Protein RAB [Trichonympha agilis]
Length = 170
Score = 222 bits (565), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 132/171 (77%), Gaps = 2/171 (1%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
KV+VLGDSGVGKT L+NQ+ NKFS QYKATIGADF+TKE+ +D++ VT+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
FQSLG AFYRGAD C+LVYDV KTF++L W+EEFL Q P + + PF+LLGNKID
Sbjct: 61 FQSLGVAFYRGADACILVYDVTAPKTFDNLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+ RVV KKA WC +G+I YFETSAK++ N+++AFL +A I L E
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSRE 169
>gi|50286745|ref|XP_445802.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525108|emb|CAG58721.1| unnamed protein product [Candida glabrata]
Length = 208
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 109/206 (52%), Positives = 153/206 (74%), Gaps = 4/206 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DD K+VT+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVVTMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++W++EFL A+ E+ PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWKDEFLVHANISSPESFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK+D + S +VV +K E G++P F TSAK N+D AF +A+ AL+
Sbjct: 124 LGNKVDIE-DSKKVVSEKAGQELAKSLGDVPLFLTSAKSAINVDTAFEEIAKSALQQNQN 182
Query: 187 DIYYQPQGISETVS-EVE-QRGGCAC 210
D + ++ ++ ++E + C+C
Sbjct: 183 DAHAFEDDFNDAINIQLEGESNSCSC 208
>gi|365985618|ref|XP_003669641.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
gi|343768410|emb|CCD24398.1| hypothetical protein NDAI_0D00840 [Naumovozyma dairenensis CBS 421]
Length = 208
Score = 221 bits (563), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 107/182 (58%), Positives = 139/182 (76%), Gaps = 2/182 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DD K+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTIDDDKIATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNAKSFENIKSWRDEFLIHANISTPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S ++V A E G+IP F TSAK+ NI+ AF +A AL+
Sbjct: 124 LGNKIDVE-ESKKIVSSNSATELAKSLGDIPLFFTSAKDSINIENAFEEIARSALQQNQN 182
Query: 187 DI 188
D+
Sbjct: 183 DV 184
>gi|344313253|gb|AEN04486.1| putative ras-related protein Rab-7, partial [Plutella xylostella]
Length = 193
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/171 (62%), Positives = 132/171 (77%), Gaps = 3/171 (1%)
Query: 20 DSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGS 79
DSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+ +DD++VT+QIWDTAGQERFQSLG
Sbjct: 1 DSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKEVIVDDRIVTMQIWDTAGQERFQSLGV 60
Query: 80 AFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSR 139
AFYRGADCCVLV+DV TF+SL++WR+EFL QA P + E PFV+LGNK+D + +R
Sbjct: 61 AFYRGADCCVLVFDVTAPVTFKSLESWRDEFLIQASPRDPENFPFVILGNKVDLE---NR 117
Query: 140 VVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
V K+A +WC + +IPYFETSAKE N++ AF +A AL E + Y
Sbjct: 118 AVSAKRAQQWCQSKNDIPYFETSAKEAVNVELAFQTIARNALAQETEAELY 168
>gi|402887163|ref|XP_003906974.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-7a [Papio
anubis]
Length = 287
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 3/162 (1%)
Query: 23 VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFY 82
VGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWDTAGQERFQSLG AFY
Sbjct: 99 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 158
Query: 83 RGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVP 142
RGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+LGNKID + +R V
Sbjct: 159 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVA 215
Query: 143 QKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 216 TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 257
>gi|281347008|gb|EFB22592.1| hypothetical protein PANDA_006030 [Ailuropoda melanoleuca]
gi|355714971|gb|AES05181.1| RAB7A, member RAS oncoprotein family [Mustela putorius furo]
Length = 189
Score = 221 bits (563), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 107/162 (66%), Positives = 127/162 (78%), Gaps = 3/162 (1%)
Query: 23 VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFY 82
VGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWDTAGQERFQSLG AFY
Sbjct: 1 VGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFY 60
Query: 83 RGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVP 142
RGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+LGNKID + +R V
Sbjct: 61 RGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVA 117
Query: 143 QKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 118 TKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 159
>gi|384485925|gb|EIE78105.1| vacuolar biogenesis protein [Rhizopus delemar RA 99-880]
Length = 400
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/180 (60%), Positives = 131/180 (72%), Gaps = 7/180 (3%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV KFS QYKATIGADF+TKE+ + D+LVT+QIWDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVGDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
VL YDVN K+FE+L WR+EFL QA P + E PFVLLGNKID + S R+V QK+A+
Sbjct: 61 VLAYDVNNSKSFEALDQWRDEFLVQASPRDPECFPFVLLGNKIDVE-ESKRMVSQKRAMA 119
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE------HKDIYYQPQGISETVSEV 202
WC +GN+PYFETSAKE N+++AF +A+ AL E D P G E + ++
Sbjct: 120 WCQSKGNVPYFETSAKEAINVEQAFQTIAKNALSQETDVDIDFPDTIQIPNGRQEEIKKI 179
>gi|365759109|gb|EHN00920.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
gi|401841460|gb|EJT43846.1| YPT7-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 208
Score = 221 bits (562), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/181 (59%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S +VV +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDAE-ESKKVVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|117939083|dbj|BAF36695.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 196
Score = 220 bits (561), Expect = 2e-55, Method: Compositional matrix adjust.
Identities = 108/174 (62%), Positives = 133/174 (76%), Gaps = 2/174 (1%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
KV+VLGDSGVGKT L+NQ+ NKFS QYKATIGADF+TKE+ +D++ VT+QIWDTAG ER
Sbjct: 1 KVVVLGDSGVGKTCLINQFALNKFSAQYKATIGADFLTKEVVVDNRQVTMQIWDTAGLER 60
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
FQSLG A YRGAD C+LVYDV KTFE+L W+EEFL Q P + + PF+LLGNKID
Sbjct: 61 FQSLGVALYRGADACILVYDVTQPKTFENLDGWKEEFLFQGSPQDPDNFPFMLLGNKIDL 120
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
+ RVV KKA WC +G+I YFETSAK++ N+++AFL +A I L E +D
Sbjct: 121 E--EQRVVQAKKAENWCHQKGDIKYFETSAKDNSNVEQAFLEIARIGLSREVQD 172
>gi|6323642|ref|NP_013713.1| Ypt7p [Saccharomyces cerevisiae S288c]
gi|418594|sp|P32939.1|YPT7_YEAST RecName: Full=GTP-binding protein YPT7
gi|5519|emb|CAA48244.1| GTP-binding protein (Ypt7p) [Saccharomyces cerevisiae]
gi|728647|emb|CAA88515.1| Ypt7p [Saccharomyces cerevisiae]
gi|1171484|dbj|BAA10973.1| small GTP binding protein [Saccharomyces cerevisiae]
gi|151946160|gb|EDN64391.1| GTP-binding protein [Saccharomyces cerevisiae YJM789]
gi|190408238|gb|EDV11503.1| GTP-binding protein YPT7 [Saccharomyces cerevisiae RM11-1a]
gi|256273536|gb|EEU08470.1| Ypt7p [Saccharomyces cerevisiae JAY291]
gi|259148577|emb|CAY81822.1| Ypt7p [Saccharomyces cerevisiae EC1118]
gi|285814003|tpg|DAA09898.1| TPA: Ypt7p [Saccharomyces cerevisiae S288c]
gi|323336222|gb|EGA77493.1| Ypt7p [Saccharomyces cerevisiae Vin13]
gi|323353008|gb|EGA85308.1| Ypt7p [Saccharomyces cerevisiae VL3]
gi|349580284|dbj|GAA25444.1| K7_Ypt7p [Saccharomyces cerevisiae Kyokai no. 7]
gi|365763733|gb|EHN05259.1| Ypt7p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 208
Score = 220 bits (561), Expect = 3e-55, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S ++V +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|194390946|dbj|BAG60591.1| unnamed protein product [Homo sapiens]
Length = 193
Score = 220 bits (560), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 108/177 (61%), Positives = 130/177 (73%), Gaps = 17/177 (9%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPE------- 116
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 117 ----------NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQAIARNALKQE 163
>gi|21465930|pdb|1KY2|A Chain A, Gppnhp-Bound Ypt7p At 1.6 A Resolution
gi|21465931|pdb|1KY3|A Chain A, Gdp-Bound Ypt7p At 1.35 A Resolution
Length = 182
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 106/176 (60%), Positives = 137/176 (77%), Gaps = 2/176 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
LGNKID + S ++V +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQ 178
>gi|299741328|ref|XP_001834386.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
gi|298404664|gb|EAU87363.2| GTP-binding protein ypt7 [Coprinopsis cinerea okayama7#130]
Length = 213
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 118/224 (52%), Positives = 145/224 (64%), Gaps = 31/224 (13%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TKE+ +++ VT+Q
Sbjct: 1 MPRSALLKVIILGDSGVGKTSLMNQYVNKRFSTQYKATIGADFLTKEVDTEERPVTMQQQ 60
Query: 67 DT------------------AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWRE 108
T AGQERFQSLG AFYRGADCCVLV+DVN K+F++L++WR+
Sbjct: 61 PTHTTSSLALSLTLHFATSIAGQERFQSLGVAFYRGADCCVLVFDVNSAKSFQALESWRD 120
Query: 109 EFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCN 168
EFL QA P + E PFV+LGNK V QK+AL WC +GNIPYFETSAKE N
Sbjct: 121 EFLIQASPHDPENFPFVVLGNK----------VTQKRALAWCQAKGNIPYFETSAKEAIN 170
Query: 169 IDEAFLCVAEIALKNEHKDIYYQ--PQGISETVSEVEQRGGCAC 210
+++AF VA AL+ E ++ + P E + GC C
Sbjct: 171 VEQAFQTVAVKALEQESEEQLFSDYPDSFPLDAHEADNT-GCNC 213
>gi|401624365|gb|EJS42425.1| ypt7p [Saccharomyces arboricola H-6]
Length = 208
Score = 219 bits (559), Expect = 4e-55, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + + +VV +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDAE-ETKKVVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|229595003|ref|XP_001032971.3| Ras family protein [Tetrahymena thermophila]
gi|6682935|dbj|BAA88954.1| Rab7 [Tetrahymena thermophila]
gi|225566446|gb|EAR85308.3| Ras family protein [Tetrahymena thermophila SB210]
Length = 209
Score = 219 bits (559), Expect = 5e-55, Method: Compositional matrix adjust.
Identities = 101/163 (61%), Positives = 132/163 (80%), Gaps = 2/163 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
KR+ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 5 KRKQLYKIIILGDSGVGKTSLMNQYVNQRFTQQYRATVGADFMAKEVTIDDRMVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ +KTFE+L++W+EEF +Q P + + PFV++
Sbjct: 65 TAGQERFQSLGGAFYRGADCCVLVYDITNKKTFENLESWKEEFKQQGCPKDPDTFPFVVI 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
GNK +D S R V + A +WC G+I +FETSAK+D N++
Sbjct: 125 GNK--SDKASERKVETEFAQQWCKSNGDIKHFETSAKDDTNVN 165
>gi|403348115|gb|EJY73488.1| CRE-RAB-7 protein [Oxytricha trifallax]
Length = 219
Score = 219 bits (557), Expect = 8e-55, Method: Compositional matrix adjust.
Identities = 99/188 (52%), Positives = 138/188 (73%), Gaps = 2/188 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++N LK+++LGDSGVGKT+L+ QYV K + K TIGADF KE+ +D+++VTLQIWD
Sbjct: 5 KKKNFLKIVILGDSGVGKTTLLQQYVNKKVNAHSKPTIGADFSKKEITIDNQIVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQE+FQSLG AFYRGADCC LVYD+ QK+FE L WR+ F++ A P + PFVL+
Sbjct: 65 TAGQEKFQSLGYAFYRGADCCALVYDITNQKSFEDLTRWRDGFIEHAAPTDPNKFPFVLI 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V A WC GN+PY+ETSAKE+ ++++AF+ +A++A+K E ++
Sbjct: 125 GNKVDKE--PERKVKSTDAQAWCKENGNMPYYETSAKENVSVEDAFVEMAKMAIKRESEN 182
Query: 188 IYYQPQGI 195
++ P I
Sbjct: 183 VFQLPDSI 190
>gi|410081708|ref|XP_003958433.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
gi|372465021|emb|CCF59298.1| hypothetical protein KAFR_0G02670 [Kazachstania africana CBS 2517]
Length = 208
Score = 218 bits (556), Expect = 9e-55, Method: Compositional matrix adjust.
Identities = 106/181 (58%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
K++ +LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D D+ T+Q+W
Sbjct: 4 KKKTILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEINVDGDRTATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E+ PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNTKSFENIKSWRDEFLVHANVSSPESFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + + +V+ K A + GNIP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDIE-ETKKVISVKSAQDLAKSLGNIPLFLTSAKSSINVDPAFEEIARSALQQNQN 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|19114436|ref|NP_593524.1| GTPase Ypt71 [Schizosaccharomyces pombe 972h-]
gi|74698144|sp|Q9HDY0.1|YPT71_SCHPO RecName: Full=GTP-binding protein ypt71
gi|12188974|emb|CAC21483.1| GTPase Ypt71 [Schizosaccharomyces pombe]
Length = 208
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 143/182 (78%), Gaps = 4/182 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LKV++LGDSGVGKT LMNQ+V KFS++YKATIGADF+TK++ +DDKLVTLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCV+VY+VN K+F+S++NWR+EFL Q E A PF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDEC-AFPF 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALK 182
+++GN+ID D S R V +AL++C + N+ +FE SAKE+ N+ + F V+ +AL+
Sbjct: 120 IIVGNQIDKD-ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 183 NE 184
NE
Sbjct: 179 NE 180
>gi|367017049|ref|XP_003683023.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
gi|359750686|emb|CCE93812.1| hypothetical protein TDEL_0G04450 [Torulaspora delbrueckii]
Length = 208
Score = 218 bits (555), Expect = 1e-54, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 137/181 (75%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DD K+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVLDDDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNVKSFENIKSWRDEFLVHANVSSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S +VV K A + GN+P F TSAK N+D AF + AL+
Sbjct: 124 LGNKIDVE-ESKKVVNTKSAQDLAKSLGNVPLFFTSAKNAINVDTAFEEIGRSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>gi|444314739|ref|XP_004178027.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
gi|387511066|emb|CCH58508.1| hypothetical protein TBLA_0A07180 [Tetrapisispora blattae CBS 6284]
Length = 208
Score = 217 bits (553), Expect = 2e-54, Method: Compositional matrix adjust.
Identities = 107/184 (58%), Positives = 137/184 (74%), Gaps = 2/184 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTL 63
++ +++ +LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D D T+
Sbjct: 1 MSTRKKQILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVAIDNDTTATM 60
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERFQSLG AFYRGADCCVLVYDV K+FE++++WR+EFL A+ E P
Sbjct: 61 QVWDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFENIKSWRDEFLIHANVSSPETFP 120
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
FV+LGNK+DT S + V K A E GNIP F+TSAK N+D AF +A AL+
Sbjct: 121 FVILGNKVDT-KDSKKSVTLKAAQELSKSLGNIPLFQTSAKNSINVDSAFEEIARGALEQ 179
Query: 184 EHKD 187
D
Sbjct: 180 NKAD 183
>gi|50306305|ref|XP_453125.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642259|emb|CAH00221.1| KLLA0D01265p [Kluyveromyces lactis]
Length = 207
Score = 217 bits (552), Expect = 3e-54, Method: Compositional matrix adjust.
Identities = 106/194 (54%), Positives = 143/194 (73%), Gaps = 2/194 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQM-DDKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ + DDK+ T+Q+W
Sbjct: 3 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVIVNDDKVATMQVW 62
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV K+F+++++WR+EFL A+ E PFV+
Sbjct: 63 DTAGQERFQSLGVAFYRGADCCVLVYDVTNGKSFDNVKSWRDEFLVHANVSSPETFPFVI 122
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
L NK+D + S +VV + A E GN+P F TSAK+ N+ +AF +A AL+
Sbjct: 123 LANKVDVE-ESKKVVSSRSAQEQAKSLGNVPLFFTSAKDSINVQDAFEEIARSALQQSQS 181
Query: 187 DIYYQPQGISETVS 200
D +SE ++
Sbjct: 182 DADAYEDDLSEAIN 195
>gi|256083426|ref|XP_002577945.1| rab9 and [Schistosoma mansoni]
gi|353229652|emb|CCD75823.1| putative rab9 and [Schistosoma mansoni]
Length = 205
Score = 216 bits (551), Expect = 4e-54, Method: Compositional matrix adjust.
Identities = 108/197 (54%), Positives = 135/197 (68%), Gaps = 11/197 (5%)
Query: 19 GDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLG 78
GDSGVGKTSL+ QY+ KFS QYKATIGADF TK+ DD+LVT+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 79 SAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSS 138
AFYRGADCCVLVYDV + TF++L +WR+EFL Q+ P E PF+++GNK D D +
Sbjct: 75 VAFYRGADCCVLVYDVTMTSTFKTLDSWRDEFLVQSSPRNPERFPFIVIGNKCDLD---N 131
Query: 139 RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-----HKDIYYQPQ 193
R V + +A +WC GN+PYFE SAKE+ N+++AF + +A+ E H D P
Sbjct: 132 RAVSENRAKQWCQANGNLPYFECSAKENTNVEKAFAHIIGVAIDEESATNLHSDY---PD 188
Query: 194 GISETVSEVEQRGGCAC 210
I E E + C C
Sbjct: 189 SIRLGTEEQENQDRCRC 205
>gi|18421886|ref|NP_568566.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
gi|75164694|sp|Q948K6.1|RABG1_ARATH RecName: Full=Ras-related protein RABG1; Short=AtRABG1; AltName:
Full=Ras-related protein Rab78; Short=AtRab78
gi|15718422|dbj|BAB68378.1| AtRab78 [Arabidopsis thaliana]
gi|332007072|gb|AED94455.1| RAB GTPase homolog G1 [Arabidopsis thaliana]
Length = 204
Score = 216 bits (549), Expect = 6e-54, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I+LGDSGVGKTSL+ +Y F Q + +TI D VTKE+ + ++ V LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+SL S FYR DCCVLVYDVN KTFES+ NW +EF+KQA+P PFVL+GNK D
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ 191
+ G RVV ++ A +WC +GNI YFETSAK N++EAFL +A+ AL NE + D +
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQIDDMER 185
Query: 192 PQGISETVSEVEQRGGCAC 210
+ + T+ + R C+C
Sbjct: 186 YRSVVPTIEKETPRSRCSC 204
>gi|413946252|gb|AFW78901.1| hypothetical protein ZEAMMB73_911919 [Zea mays]
Length = 154
Score = 214 bits (546), Expect = 1e-53, Method: Compositional matrix adjust.
Identities = 99/156 (63%), Positives = 125/156 (80%), Gaps = 3/156 (1%)
Query: 56 MDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQAD 115
M L+ +QIWDTAGQERFQSLG AFYRGADCCVLVYDVNV+++F +L W +EFL QA
Sbjct: 1 MPLPLLCMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNVKRSFNTLDTWHDEFLNQAG 60
Query: 116 PGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLC 175
P + + PF+L+GNKID DGGS R+VP+KKA EWCA +G+IPYFETSAKED N+D AFLC
Sbjct: 61 PSDPQRFPFILVGNKIDLDGGSKRMVPEKKAREWCASKGDIPYFETSAKEDHNVDTAFLC 120
Query: 176 VAEIALKNEH-KDIYYQPQGISETVSEVEQRGGCAC 210
+A +AL++EH +DIY+ + ++E V + EQ GCAC
Sbjct: 121 IARLALEHEHDQDIYF--KTVAEQVPDTEQTSGCAC 154
>gi|145546424|ref|XP_001458895.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74831428|emb|CAI39303.1| rab_C51 [Paramecium tetraurelia]
gi|124426717|emb|CAK91498.1| unnamed protein product [Paramecium tetraurelia]
Length = 206
Score = 214 bits (544), Expect = 2e-53, Method: Compositional matrix adjust.
Identities = 103/204 (50%), Positives = 143/204 (70%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGK++LM+QYV +F+Q YKA++G DF+ K++ +DD++VTLQ+WD
Sbjct: 4 QKKQLFKIIILGDSGVGKSALMDQYVNARFTQLYKASVGTDFMGKKVMIDDRMVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL + R EFL Q P E PF +L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSQRNEFLMQGQPKYPEHFPFFVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D S R V + KA +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ASQRKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + ++GGC
Sbjct: 182 EIFFPTTVTLTKQSQKPQAKQGGC 205
>gi|358339881|dbj|GAA47859.1| Ras-related protein Rab-7A [Clonorchis sinensis]
Length = 181
Score = 213 bits (543), Expect = 3e-53, Method: Compositional matrix adjust.
Identities = 106/184 (57%), Positives = 133/184 (72%), Gaps = 5/184 (2%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV KFS QYKATIGADF+TKE +DD++ TLQ+WDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVTRKFSNQYKATIGADFLTKETVVDDRVATLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
VLVYDV + TF++L +WR+EFL QA P + E PFV++GNK D +R V +++A +
Sbjct: 61 VLVYDVTMPNTFKTLDSWRDEFLIQASPRDPENFPFVVIGNKCDL---PNRAVAERRARQ 117
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ-PQGISETVSEVEQRG 206
WC +GN+PYFE SAKE N+D+AF VA +AL E + DI + P I + E R
Sbjct: 118 WCQMKGNLPYFECSAKEATNVDQAFQHVARVALAQESEADICSEFPDQIQLGPTPSEPRS 177
Query: 207 GCAC 210
GC+C
Sbjct: 178 GCSC 181
>gi|367005122|ref|XP_003687293.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
gi|357525597|emb|CCE64859.1| hypothetical protein TPHA_0J00360 [Tetrapisispora phaffii CBS 4417]
Length = 209
Score = 213 bits (542), Expect = 4e-53, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 136/182 (74%), Gaps = 3/182 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD--KLVTLQI 65
+++NLLKVIVLGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +DD + T+Q+
Sbjct: 4 RKKNLLKVIVLGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVVIDDGSQAATMQV 63
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVLVYDV K+F+++++WR+EFL A+ E PFV
Sbjct: 64 WDTAGQERFQSLGVAFYRGADCCVLVYDVTNPKSFDNIKSWRDEFLIHANVSSPETFPFV 123
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+LGNKID + S + + K+ E GNIP F TSAK+ N+D AF + AL+
Sbjct: 124 ILGNKIDIE-DSKQKISAKQGQEMAKELGNIPLFLTSAKDSINVDVAFEEITRGALQQNQ 182
Query: 186 KD 187
D
Sbjct: 183 ND 184
>gi|9758338|dbj|BAB08894.1| Ras-related protein RAB7-like [Arabidopsis thaliana]
Length = 183
Score = 213 bits (541), Expect = 5e-53, Method: Compositional matrix adjust.
Identities = 101/174 (58%), Positives = 128/174 (73%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I+LGDSGVGKTSL+ +Y + F Q + +TI D VTKE+ + ++ V LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYPHKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+SL S FYR DCCVLVYDVN KTFES+ NW +EF+KQA+P PFVL+GNK D
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+ G RVV ++ A +WC +GNI YFETSAK N++EAFL +A+ AL NE +
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQ 179
>gi|238499803|ref|XP_002381136.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
gi|220692889|gb|EED49235.1| Rab small monomeric GTPase Rab7, putative [Aspergillus flavus
NRRL3357]
Length = 201
Score = 212 bits (540), Expect = 6e-53, Method: Compositional matrix adjust.
Identities = 103/185 (55%), Positives = 133/185 (71%), Gaps = 1/185 (0%)
Query: 26 TSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGA 85
T++ + V KFS YKATIGADF+TKE+ +DD+LVT+QIWDTAGQERFQSLG AFYRGA
Sbjct: 18 TTISAKQVNKKFSASYKATIGADFLTKEVLVDDRLVTMQIWDTAGQERFQSLGVAFYRGA 77
Query: 86 DCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKK 145
DCCVLVYDVN K+FE+L +WR+EFL QA P + E PFV++GNKID + S R++ K+
Sbjct: 78 DCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDPENFPFVVIGNKIDVE-ESKRMISSKR 136
Query: 146 ALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQR 205
A+ +C +GNIPYFETSAKE N+++AF +A AL E + + + +R
Sbjct: 137 AMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARSALAQEEAEEFSGEFSDPINIHLDSER 196
Query: 206 GGCAC 210
GCAC
Sbjct: 197 DGCAC 201
>gi|29841442|gb|AAP06474.1| SJCHGC06013 protein [Schistosoma japonicum]
gi|226466782|emb|CAX69526.1| RAB7, member RAS oncogene family [Schistosoma japonicum]
Length = 205
Score = 212 bits (540), Expect = 7e-53, Method: Compositional matrix adjust.
Identities = 106/197 (53%), Positives = 133/197 (67%), Gaps = 11/197 (5%)
Query: 19 GDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLG 78
GDSGVGKTSL+ QY+ KFS QYKATIGADF TK+ DD+LVT+QIWDTAGQERFQSLG
Sbjct: 15 GDSGVGKTSLITQYIDKKFSNQYKATIGADFFTKQEVFDDRLVTMQIWDTAGQERFQSLG 74
Query: 79 SAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSS 138
AFYRGADCCVLVYDV++ TF++L +WR EFL Q+ P E PF+++GNK D D +
Sbjct: 75 VAFYRGADCCVLVYDVSMTSTFKTLDSWRNEFLVQSSPRNPEKFPFIVIGNKCDLD---N 131
Query: 139 RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-----HKDIYYQPQ 193
R + + +A +WC GN+PYFE SAKE+ N++ AF + +A+ E H D P
Sbjct: 132 RAISENRARQWCQANGNLPYFECSAKENTNVELAFEHIIRVAIDEESATNLHSDY---PD 188
Query: 194 GISETVSEVEQRGGCAC 210
I E + C C
Sbjct: 189 SIRLGTEEQGNQDRCRC 205
>gi|401883503|gb|EJT47711.1| Rab7 [Trichosporon asahii var. asahii CBS 2479]
Length = 670
Score = 211 bits (538), Expect = 1e-52, Method: Compositional matrix adjust.
Identities = 101/162 (62%), Positives = 123/162 (75%), Gaps = 12/162 (7%)
Query: 23 VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFY 82
VGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WDTAGQERFQSLG AFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 83 RGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVP 142
RGADCCVLVYDVN K+FE+L WR+EFL Q PFV+LGNKID +
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ-------NFPFVVLGNKIDMEESK----- 154
Query: 143 QKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+ +A+ WC +GNIPYFETSAKE N+++AF +A+ AL E
Sbjct: 155 RMRAMTWCQAKGNIPYFETSAKEAINVEQAFQTIAKNALAQE 196
>gi|50978606|dbj|BAD34970.1| EhRab7C protein [Entamoeba histolytica]
gi|449708719|gb|EMD48124.1| EhRab7C protein, putative [Entamoeba histolytica KU27]
Length = 207
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 95/183 (51%), Positives = 133/183 (72%), Gaps = 1/183 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N ++ LLK+I++GDS VGK+SLMNQ++ F+ QYKATIGADF+TKE+ +D + V LQ
Sbjct: 1 MNKPKKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAG E+F S G AFYRG+DCC LV+DV +++F+SL W+ +FL A+P PF
Sbjct: 61 VWDTAGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V++GNK+D D + RVV ++A +WC G+IPY+ETSAK N++EAFL VA +K
Sbjct: 121 VVMGNKVDED-AAKRVVTNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTM 179
Query: 185 HKD 187
K+
Sbjct: 180 KKE 182
>gi|57491800|gb|AAW51395.1| GekBS079P [Gekko japonicus]
Length = 183
Score = 211 bits (536), Expect = 2e-52, Method: Compositional matrix adjust.
Identities = 106/186 (56%), Positives = 131/186 (70%), Gaps = 7/186 (3%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
VLV+DV TF++L +WR+EFL QA P + E PFV+LGNKID + +R V K+A
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVTTKRAQA 117
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY----QPQGISETVSEVEQ 204
WC + NIPYFETSAKE N+++AF +A ALK E + Y +P + +
Sbjct: 118 WCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEVELYNEFPEPIKLDKNDRAKAS 177
Query: 205 RGGCAC 210
GC+C
Sbjct: 178 AEGCSC 183
>gi|167377314|ref|XP_001734353.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165904184|gb|EDR29502.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 210 bits (534), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 94/179 (52%), Positives = 130/179 (72%), Gaps = 1/179 (0%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLK+I++GDS VGK+SLMNQ++ F+ QYKATIGADF+TKE+ +D + + LQ+WDT
Sbjct: 5 KKTLLKMILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESIALQVWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G AFYRG+DCC LV+DV +++F+SL W+ +FL A+P PFV++G
Sbjct: 65 AGHEKFMSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNPTNFPFVVMG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK+D D + RVV +A EWC G+IPY+ETSAK N++EAFL VA +K K+
Sbjct: 125 NKVDED-AAKRVVSNDQAKEWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTMKKE 182
>gi|351703936|gb|EHB06855.1| Ras-related protein Rab-7a [Heterocephalus glaber]
Length = 183
Score = 209 bits (533), Expect = 4e-52, Method: Compositional matrix adjust.
Identities = 101/156 (64%), Positives = 121/156 (77%), Gaps = 3/156 (1%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWDTAGQERFQSLGVAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
VLV+DV TF++L +WR+EFL QA P + E PFV+LGNKID + +R V K+A
Sbjct: 61 VLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVLGNKIDLE---NRQVATKRAQA 117
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 118 WCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 153
>gi|149239963|ref|XP_001525857.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
gi|146449980|gb|EDK44236.1| GTP-binding protein ypt7 [Lodderomyces elongisporus NRRL YB-4239]
Length = 214
Score = 207 bits (526), Expect = 3e-51, Method: Compositional matrix adjust.
Identities = 104/182 (57%), Positives = 135/182 (74%), Gaps = 6/182 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFSQQYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSQQYKATIGADFLTKEIPIDNNKSVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q + + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQLNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALK 182
+GNKID D S ++ +K L + N P FETSAK+ N++ AF VA++AL+
Sbjct: 124 IGNKIDVD-DSKKIPSLQKKLHNITHNQLGGLNYPVFETSAKDSVNVEAAFEVVAKMALQ 182
Query: 183 NE 184
E
Sbjct: 183 QE 184
>gi|260950047|ref|XP_002619320.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
gi|238846892|gb|EEQ36356.1| conserved hypothetical protein [Clavispora lusitaniae ATCC 42720]
Length = 214
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 104/183 (56%), Positives = 136/183 (74%), Gaps = 7/183 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TK+L +D+K V+LQIWD
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDLTIDNKTVSLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF+++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFPFIII 123
Query: 128 GNKIDTDGGSSRVVP--QKKALEWCAYR-GNI--PYFETSAKEDCNIDEAFLCVAEIALK 182
GNKID D S+ +P KK + + G + P FETSAK+ N+ AF VA++AL+
Sbjct: 124 GNKIDVD--ESKKIPSLSKKLMNITNNQLGGLSYPVFETSAKDSINVQAAFEVVAKMALQ 181
Query: 183 NEH 185
E
Sbjct: 182 QEE 184
>gi|358366631|dbj|GAA83251.1| alpha-galactosidase [Aspergillus kawachii IFO 4308]
Length = 199
Score = 206 bits (525), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 108/211 (51%), Positives = 140/211 (66%), Gaps = 17/211 (8%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSL-----MNQYVYNKFSQQYKATIGADFVTKELQMDDK 59
++ +++ LLKVI+LGDSGV + + Q V KFS YKATIGADF+TKE
Sbjct: 1 MSSRKKVLLKVIILGDSGVAVPRIPTHPHLAQQVNKKFSASYKATIGADFLTKE------ 54
Query: 60 LVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEH 119
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P +
Sbjct: 55 -----IWDTAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFEALDSWRDEFLIQASPRDP 109
Query: 120 EACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
E+ PFV++GNKID + S R++ K+A+ +C +GNIPYFETSAKE N+++AF +A
Sbjct: 110 ESFPFVVIGNKIDVE-ESKRMISSKRAMTFCQSKGNIPYFETSAKEAVNVEQAFEVIARS 168
Query: 180 ALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
AL E + + + +R GCAC
Sbjct: 169 ALAQEEAEEFSGEFSDPINIHLDGERDGCAC 199
>gi|294656310|ref|XP_002770249.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
gi|199431371|emb|CAR65608.1| DEHA2D02420p [Debaryomyces hansenii CBS767]
Length = 215
Score = 206 bits (524), Expect = 4e-51, Method: Compositional matrix adjust.
Identities = 110/214 (51%), Positives = 145/214 (67%), Gaps = 13/214 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLSSWKDEFLIQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALK 182
+GNKID D S ++ +K L N P FETSAK+ N++ AF VA++AL+
Sbjct: 124 IGNKIDVD-DSKKIPSLQKKLNNITNNQLGGLNYPVFETSAKDSINVESAFEVVAKMALQ 182
Query: 183 NEHKDIYYQPQGISETVSEV------EQRGGCAC 210
E + +S+ ++ GGCAC
Sbjct: 183 QEELN-DANGNDVSDDYNDAINIHLENDAGGCAC 215
>gi|448523590|ref|XP_003868901.1| Ypt72 GTPase [Candida orthopsilosis Co 90-125]
gi|380353241|emb|CCG25997.1| Ypt72 GTPase [Candida orthopsilosis]
Length = 211
Score = 206 bits (524), Expect = 5e-51, Method: Compositional matrix adjust.
Identities = 105/183 (57%), Positives = 135/183 (73%), Gaps = 6/183 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQI 65
M + LLK+IV+GDSGVGKTSLM+Q+V NKFSQQYKATIGADF+TKE+ +D K VTLQI
Sbjct: 1 MSPKKLLKIIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKTVTLQI 60
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PFV
Sbjct: 61 WDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFV 120
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIAL 181
++GNKID D S ++ +K L + N P FETSAK+ N++ AF VA++AL
Sbjct: 121 IIGNKIDVD-DSKKIPSLQKKLHNITHNQLGGLNHPVFETSAKDGVNVESAFEVVAKMAL 179
Query: 182 KNE 184
+ E
Sbjct: 180 QQE 182
>gi|403366463|gb|EJY83034.1| Rab7, putative [Oxytricha trifallax]
Length = 219
Score = 206 bits (523), Expect = 6e-51, Method: Compositional matrix adjust.
Identities = 99/192 (51%), Positives = 136/192 (70%), Gaps = 4/192 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++N LK+++LGDSGVGKT+L+ QYV K + K TIGADF KEL +D+ +VTLQIWD
Sbjct: 3 KKKNFLKIVILGDSGVGKTTLLQQYVSGKSNPHSKPTIGADFSKKELMIDNTVVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQE+FQSLG AFYRGADCC LVYD+ QK+F+ L WR+ F++ A P + PFV++
Sbjct: 63 TAGQEKFQSLGYAFYRGADCCALVYDITNQKSFDDLNKWRDGFIEHAAPPDPNTFPFVVI 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + S R V A W G+I Y+ETSAKE+ ++D+AF+ +A++A+K +
Sbjct: 123 GNKLDRE--SERRVKTSDAQAWSKENGDITYYETSAKENISVDDAFIEMAKMAIKRDQ-- 178
Query: 188 IYYQPQGISETV 199
Q G+ ET+
Sbjct: 179 TSGQLFGLPETI 190
>gi|448097583|ref|XP_004198710.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|448101433|ref|XP_004199559.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380132|emb|CCE82373.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
gi|359380981|emb|CCE81440.1| Piso0_002096 [Millerozyma farinosa CBS 7064]
Length = 214
Score = 205 bits (522), Expect = 8e-51, Method: Compositional matrix adjust.
Identities = 105/184 (57%), Positives = 138/184 (75%), Gaps = 8/184 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDNNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLSSWKDEFLVQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVP--QKKALEWCAYR---GNIPYFETSAKEDCNIDEAFLCVAEIAL 181
+GNKID D S+ +P QKK + + N P FETSAK+ N+++AF VA++AL
Sbjct: 124 IGNKIDVD--DSKKIPSLQKKLSNITSNQLGGLNYPVFETSAKDAINVEQAFEVVAKMAL 181
Query: 182 KNEH 185
+ E
Sbjct: 182 QQEE 185
>gi|190348567|gb|EDK41039.2| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 205 bits (521), Expect = 1e-50, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 137/188 (72%), Gaps = 16/188 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVP--QKK-------ALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+GNKID D S+ +P QKK L +Y P FETSAKE N++ AF +A
Sbjct: 124 IGNKIDAD--DSKKIPSLQKKLNNVTNNQLGGLSY----PVFETSAKESINVESAFEVIA 177
Query: 178 EIALKNEH 185
++AL+ E
Sbjct: 178 KMALQQEE 185
>gi|344302658|gb|EGW32932.1| hypothetical protein SPAPADRAFT_60274 [Spathaspora passalidarum
NRRL Y-27907]
Length = 215
Score = 204 bits (519), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 102/182 (56%), Positives = 135/182 (74%), Gaps = 6/182 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEIIIDNNKPVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALK 182
+GNKID D S ++ +K L + N P FETSAK+ N++ AF +A++AL+
Sbjct: 124 IGNKIDVD-DSKKIPSLQKKLHNITHNQLGGLNYPVFETSAKDSINVEAAFEVIAKMALQ 182
Query: 183 NE 184
E
Sbjct: 183 QE 184
>gi|126135226|ref|XP_001384137.1| hypothetical protein PICST_67584 [Scheffersomyces stipitis CBS
6054]
gi|126091335|gb|ABN66108.1| Gtp-binding protein of the rab family [Scheffersomyces stipitis CBS
6054]
Length = 215
Score = 204 bits (518), Expect = 2e-50, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 132/182 (72%), Gaps = 4/182 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D +K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEISIDGNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYR---GNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+GNKID D QKK + N P FETSAK+ N++ AF +A++AL+
Sbjct: 124 IGNKIDVDEAKKIPSLQKKLQNITNNQLGGLNYPVFETSAKDGINVEAAFEVIAKMALQQ 183
Query: 184 EH 185
E
Sbjct: 184 EE 185
>gi|354548148|emb|CCE44884.1| hypothetical protein CPAR2_406870 [Candida parapsilosis]
Length = 210
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 104/178 (58%), Positives = 133/178 (74%), Gaps = 6/178 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWDTAG 70
LLKVIV+GDSGVGKTSLM+Q+V NKFSQQYKATIGADF+TKE+ +D K VTLQIWDTAG
Sbjct: 5 LLKVIVVGDSGVGKTSLMHQFVNNKFSQQYKATIGADFLTKEITLDGGKKVTLQIWDTAG 64
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PF+++GNK
Sbjct: 65 QERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFIIIGNK 124
Query: 131 IDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
ID D S ++ +K L + N P FETSAK+ N++ AF VA++AL+ E
Sbjct: 125 IDVD-DSKKIPSLQKKLHNITHNQLGGLNHPVFETSAKDGVNVESAFEVVAKMALQQE 181
>gi|146414423|ref|XP_001483182.1| conserved hypothetical protein [Meyerozyma guilliermondii ATCC
6260]
Length = 215
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 107/188 (56%), Positives = 137/188 (72%), Gaps = 16/188 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITVDNNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLIQSNVLNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVP--QKK-------ALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+GNKID D S+ +P QKK L +Y P FETSAKE N++ AF +A
Sbjct: 124 IGNKIDAD--DSKKIPSLQKKLNNVTNNQLGGLSY----PVFETSAKESINVESAFEVIA 177
Query: 178 EIALKNEH 185
++AL+ E
Sbjct: 178 KMALQQEE 185
>gi|323447808|gb|EGB03717.1| hypothetical protein AURANDRAFT_39255 [Aureococcus anophagefferens]
Length = 183
Score = 203 bits (517), Expect = 3e-50, Method: Compositional matrix adjust.
Identities = 103/183 (56%), Positives = 130/183 (71%), Gaps = 7/183 (3%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV +FS YKATIGADF+TKE+ +DDKLVTLQIWDTAGQERFQSLG AFYRGAD C
Sbjct: 1 MNQYVNKRFSASYKATIGADFLTKEVMIDDKLVTLQIWDTAGQERFQSLGVAFYRGADAC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
+LVYD+ K+FE+L +WREEFL QA P + E PFV+LGNK+D + + R VP+ KA
Sbjct: 61 ILVYDITQPKSFENLDSWREEFLVQASPPDIENFPFVVLGNKLDRE--NDRRVPKAKAQT 118
Query: 149 WCAYRGNIP--YFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQRG 206
WC + + P YFETSAKE ++ AF A++AL E+ + + P+ I+ + Q G
Sbjct: 119 WCKSKASAPLRYFETSAKEAVQVEAAFQEAAQLALSQENTEADFLPETINLGAA---QAG 175
Query: 207 GCA 209
G A
Sbjct: 176 GTA 178
>gi|297801642|ref|XP_002868705.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297314541|gb|EFH44964.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 222
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 97/176 (55%), Positives = 129/176 (73%), Gaps = 2/176 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++R LK+I+LG+SGVGKTSL +Y+ +F + + T+G DF KEL +D + VTLQIWD
Sbjct: 38 QKRTKLKIILLGNSGVGKTSLTKRYIGEEFKRLHMNTVGMDFTNKELCVDKEQVTLQIWD 97
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADP--GEHEACPFV 125
TAGQERF S+ S FYR A+CCVLVYDVN+ ++FESL W +F+++ADP + PFV
Sbjct: 98 TAGQERFHSITSGFYRDANCCVLVYDVNILESFESLDIWHAQFVEEADPITPDKFRIPFV 157
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
L+GNK D G +S VV ++KA++WC +G I YFETSAKE N+DEAF+ VA AL
Sbjct: 158 LMGNKTDVKGRTSPVVEKEKAVQWCETKGEIAYFETSAKEKSNVDEAFMEVARKAL 213
>gi|344234626|gb|EGV66494.1| hypothetical protein CANTEDRAFT_101058 [Candida tenuis ATCC 10573]
Length = 215
Score = 203 bits (516), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 103/182 (56%), Positives = 132/182 (72%), Gaps = 4/182 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TK++ +D+ K VTLQIW
Sbjct: 4 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKDITLDNNKQVTLQIW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL YDV +K+ +L +W++EFL Q++ + PF++
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLCYDVTNEKSLNNLASWKDEFLVQSNVSNPQDFPFII 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYR---GNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+GNKID D QKK + N P FETSAK+ N++ AF VA++AL+
Sbjct: 124 IGNKIDVDENKKIPSLQKKLANITNNQLGGLNYPVFETSAKDAINVEAAFEVVAKMALQQ 183
Query: 184 EH 185
E
Sbjct: 184 EE 185
>gi|397632147|gb|EJK70436.1| hypothetical protein THAOC_08208 [Thalassiosira oceanica]
Length = 251
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 107/191 (56%), Positives = 137/191 (71%), Gaps = 13/191 (6%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL-----VTL 63
++++LK+++LGDSGVGKTSLMN+Y NKF+ QYKATIGADF++K + + D+ VTL
Sbjct: 25 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDQTGNVRNVTL 84
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA-C 122
QIWDTAGQERFQSLG AFYRGAD LVYDV K+F+ L NWR EFL+Q E A
Sbjct: 85 QIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLDNWRGEFLRQVGIDEIGANF 144
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWC------AYRGNIPYFETSAKEDCNIDEAFLCV 176
PF+LLGNKID G R VP+++A EWC + G IP+FETSAK N++ AFL +
Sbjct: 145 PFILLGNKIDRPEG-ERQVPRQQAEEWCQRAGLGSMGGPIPHFETSAKTAENVEGAFLEL 203
Query: 177 AEIALKNEHKD 187
A +A+ +E K+
Sbjct: 204 ATLAVLHEEKN 214
>gi|322712842|gb|EFZ04415.1| putative Ras- protein Rab7 [Metarhizium anisopliae ARSEF 23]
Length = 203
Score = 202 bits (515), Expect = 5e-50, Method: Compositional matrix adjust.
Identities = 104/195 (53%), Positives = 133/195 (68%), Gaps = 9/195 (4%)
Query: 16 IVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQ 75
I++G+ G+ V KFS YKATIGADF+T+E+ +DD+ VT+Q+WDTAGQERFQ
Sbjct: 18 ILMGNGGI--------QVKKKFSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQERFQ 69
Query: 76 SLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDG 135
SLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P + PFV+LGNKID +
Sbjct: 70 SLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKIDVE- 128
Query: 136 GSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGI 195
S RV+ K+A+ +C +G+IPYFETSAKE NID+AF +A AL E + +
Sbjct: 129 ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINIDQAFEVIARNALAQEESEEFSGEFDD 188
Query: 196 SETVSEVEQRGGCAC 210
+ R GCAC
Sbjct: 189 PINIHIDNDRDGCAC 203
>gi|238883588|gb|EEQ47226.1| GTP-binding protein YPT7 [Candida albicans WO-1]
Length = 217
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 136/188 (72%), Gaps = 6/188 (3%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLV 61
+S + +++ LLKVI+LGDSGVGKTSLM Q+V +KFS QYKATIGADF+TKE+ +D+ K V
Sbjct: 1 MSSSSRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSV 60
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ +
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQD 120
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVA 177
PF+++GNKID D S ++ K L N P FETSAK+ N++ AF +A
Sbjct: 121 FPFIIIGNKIDVD-DSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIA 179
Query: 178 EIALKNEH 185
++AL+ E
Sbjct: 180 KMALQQEE 187
>gi|407034580|gb|EKE37287.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 197
Score = 202 bits (514), Expect = 8e-50, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
Query: 15 VIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERF 74
+I++GDS VGK+SLMNQ++ F+ QYKATIGADF+TKE+ +D + V LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 75 QSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTD 134
S G AFYRG+DCC LV+DV +++F+SL W+ +FL A+P PFV++GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 135 GGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
+ RVV ++A +WC G+IPY+ETSAK N++EAFL VA +K K+
Sbjct: 121 -AAKRVVSNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTMKKE 172
>gi|154283303|ref|XP_001542447.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
gi|150410627|gb|EDN06015.1| GTP-binding protein YPT7 [Ajellomyces capsulatus NAm1]
Length = 216
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 93/143 (65%), Positives = 117/143 (81%), Gaps = 1/143 (0%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQYV K+S YKATIGAD++TK++ +DD+LVTLQ+WDTAGQERFQSLG AFYRGADCC
Sbjct: 1 MNQYVNKKYSSSYKATIGADYLTKDVLVDDRLVTLQLWDTAGQERFQSLGVAFYRGADCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
VLVYDVN K+FE+L +WR+EFL QA P + E+ PFV+LGNKID + S R++ K+A
Sbjct: 61 VLVYDVNNSKSFETLDSWRDEFLIQASPRDPESFPFVVLGNKIDVE-ESKRMISSKRATT 119
Query: 149 WCAYRGNIPYFETSAKEDCNIDE 171
+C +GNIPYFETSAKE N+++
Sbjct: 120 YCQSKGNIPYFETSAKEAINVEQ 142
>gi|68482406|ref|XP_714835.1| likely rab family GTP-binding protein [Candida albicans SC5314]
gi|46436432|gb|EAK95794.1| likely rab family GTP-binding protein [Candida albicans SC5314]
Length = 217
Score = 202 bits (513), Expect = 9e-50, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 136/188 (72%), Gaps = 6/188 (3%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLV 61
+S + +++ LLKVI+LGDSGVGKTSLM Q+V +KFS QYKATIGADF+TKE+ +D+ K V
Sbjct: 1 MSSSSRKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITVDNNKSV 60
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ +
Sbjct: 61 TLQIWDTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQD 120
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVA 177
PF+++GNKID D S ++ K L N P FETSAK+ N++ AF +A
Sbjct: 121 FPFIIIGNKIDVD-DSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIA 179
Query: 178 EIALKNEH 185
++AL+ E
Sbjct: 180 KMALQQEE 187
>gi|183233923|ref|XP_652334.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|169801344|gb|EAL46948.2| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
Length = 197
Score = 202 bits (513), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 91/173 (52%), Positives = 126/173 (72%), Gaps = 1/173 (0%)
Query: 15 VIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERF 74
+I++GDS VGK+SLMNQ++ F+ QYKATIGADF+TKE+ +D + V LQ+WDTAG E+F
Sbjct: 1 MILIGDSAVGKSSLMNQFINKSFTAQYKATIGADFLTKEIDVDGESVALQVWDTAGHEKF 60
Query: 75 QSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTD 134
S G AFYRG+DCC LV+DV +++F+SL W+ +FL A+P PFV++GNK+D D
Sbjct: 61 MSFGQAFYRGSDCCFLVFDVTNEQSFQSLDTWKNDFLSGANPTNATNFPFVVMGNKVDED 120
Query: 135 GGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
+ RVV ++A +WC G+IPY+ETSAK N++EAFL VA +K K+
Sbjct: 121 -AAKRVVTNEQAKDWCENNGDIPYYETSAKSGLNVEEAFLTVARKVVKTMKKE 172
>gi|403376123|gb|EJY88041.1| Ras-related protein RABG3b [Oxytricha trifallax]
Length = 249
Score = 201 bits (512), Expect = 1e-49, Method: Compositional matrix adjust.
Identities = 92/177 (51%), Positives = 130/177 (73%), Gaps = 1/177 (0%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R+ +K++++GDSGVGKTSL+ + +NKF+Q +K TIGADF KEL +DD++VTLQIWDT
Sbjct: 15 RKCFVKLVIIGDSGVGKTSLIQMFEHNKFNQSFKPTIGADFSNKELTIDDRIVTLQIWDT 74
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGADCCVLVYDV +FE+L NW+ FL +++P E PF++LG
Sbjct: 75 AGQERFQSLGSAFYRGADCCVLVYDVTNPMSFENLLNWKSIFLTKSEPREPHTLPFLVLG 134
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
NK+D D G + + + A ++C G++ ++ETSAK + N++ AF + +K +
Sbjct: 135 NKMDVDAGQKK-IQENDARKFCKDNGDMIFYETSAKNNINVELAFQALISKVIKRQE 190
>gi|241951752|ref|XP_002418598.1| GTP-binding protein, putative [Candida dubliniensis CD36]
gi|223641937|emb|CAX43901.1| GTP-binding protein, putative [Candida dubliniensis CD36]
Length = 216
Score = 201 bits (511), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 133/183 (72%), Gaps = 6/183 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V +KFS QYKATIGADF+TKE+ +D+ K VTLQIW
Sbjct: 5 RKKTLLKVIILGDSGVGKTSLMQQFVNSKFSHQYKATIGADFLTKEITIDNNKSVTLQIW 64
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PF++
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 124
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALK 182
+GNKID D S ++ K L N P FETSAK+ N++ AF +A++AL+
Sbjct: 125 IGNKIDVD-DSKKIPSLSKKLNNITNNQMGGLNYPVFETSAKDGVNVEAAFEVIAKMALQ 183
Query: 183 NEH 185
E
Sbjct: 184 QEE 186
>gi|255725294|ref|XP_002547576.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
gi|240135467|gb|EER35021.1| GTP-binding protein YPT7 [Candida tropicalis MYA-3404]
Length = 216
Score = 201 bits (510), Expect = 2e-49, Method: Compositional matrix adjust.
Identities = 101/183 (55%), Positives = 132/183 (72%), Gaps = 6/183 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIW 66
+++ LLKVI+LGDSGVGKTSLM Q+V NKFS QYKATIGADF+TKE+ +D+ K V LQIW
Sbjct: 5 RKKTLLKVIILGDSGVGKTSLMQQFVNNKFSHQYKATIGADFLTKEITIDNNKQVALQIW 64
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVL +DV +K+ +L +W++EFL Q++ + PF++
Sbjct: 65 DTAGQERFQSLGVAFYRGADCCVLCFDVTNEKSLNNLTSWKDEFLVQSNVSNPQDFPFII 124
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG----NIPYFETSAKEDCNIDEAFLCVAEIALK 182
+GNKID D S ++ K L N P FETSAK+ N++ AF +A++AL+
Sbjct: 125 IGNKIDVD-DSKKIPSLSKKLNNITNNQLGGFNYPVFETSAKDGVNVEAAFEVIAKMALQ 183
Query: 183 NEH 185
E
Sbjct: 184 QEE 186
>gi|83273968|ref|XP_729630.1| Rab7 GTPase [Plasmodium yoelii yoelii 17XNL]
gi|23487996|gb|EAA21195.1| putative Rab7 GTPase [Plasmodium yoelii yoelii]
Length = 232
Score = 199 bits (505), Expect = 7e-49, Method: Compositional matrix adjust.
Identities = 102/188 (54%), Positives = 130/188 (69%), Gaps = 15/188 (7%)
Query: 22 GVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAF 81
VGKTSLMNQYV KF+ QYKATIGADF+TKE +D++ +T+QIWDTAGQERFQSLG AF
Sbjct: 9 SVGKTSLMNQYVNKKFTNQYKATIGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAF 68
Query: 82 YRGADCCVLVYDVNVQKTFESLQNWREEFLKQ------------ADPGEHEACPFVLLGN 129
YRGADCCVLV+D+ KT+ESL++W++EFL Q A P + E PFV++GN
Sbjct: 69 YRGADCCVLVFDLTNYKTYESLESWKDEFLIQVKKMKENKLSKCASPKDPENFPFVIIGN 128
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-HKDI 188
K+D + R V K L+WC NIPYFETSAK N+D+AF +A A+K E ++
Sbjct: 129 KVDE--TNKRKVQSVKVLQWCKANNNIPYFETSAKNAINVDQAFDEIARKAMKQELQEEQ 186
Query: 189 YYQPQGIS 196
Y P+ +
Sbjct: 187 IYLPETFT 194
>gi|322698170|gb|EFY89942.1| putative Ras-related protein Rab7 [Metarhizium acridum CQMa 102]
Length = 187
Score = 199 bits (505), Expect = 8e-49, Method: Compositional matrix adjust.
Identities = 99/174 (56%), Positives = 124/174 (71%), Gaps = 1/174 (0%)
Query: 37 FSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNV 96
FS YKATIGADF+T+E+ +DD+ VT+Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN
Sbjct: 15 FSASYKATIGADFLTREVMVDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNN 74
Query: 97 QKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNI 156
K+FE+L +WR+EFL QA P + PFV+LGNKID + S RV+ K+A+ +C +G+I
Sbjct: 75 AKSFEALDSWRDEFLIQASPRDPPNFPFVVLGNKIDVE-ESKRVISNKRAMTFCQSKGDI 133
Query: 157 PYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQRGGCAC 210
PYFETSAKE NID+AF +A AL E + + + R GCAC
Sbjct: 134 PYFETSAKEAINIDQAFEVIARNALAQEESEEFSGEFDDPINIHIDNDRDGCAC 187
>gi|45361063|ref|NP_989167.1| uncharacterized protein LOC394774 [Xenopus (Silurana) tropicalis]
gi|38649377|gb|AAH63349.1| hypothetical protein MGC75872 [Xenopus (Silurana) tropicalis]
Length = 199
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 97/180 (53%), Positives = 128/180 (71%), Gaps = 4/180 (2%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R LK++++G++G GK++LMNQYV +F+ Y+ATIGADF TKEL+++DK+VT+QIW
Sbjct: 1 MFHRKHLKLLLIGNAGSGKSALMNQYVNCRFTNYYRATIGADFFTKELRVNDKVVTVQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG ERFQSLG+A YRG DCC+LV+DV +F +L NW EFL QADP + PFV+
Sbjct: 61 DTAGTERFQSLGAALYRGTDCCLLVFDVTSPNSFHALDNWHREFLVQADPVSPGSFPFVV 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNK D + R V ++A EWC N YFETSAKE N+DEAFL ++A N +
Sbjct: 121 IGNKTDLE---ERQVSLREAEEWCKTY-NAKYFETSAKESRNVDEAFLEAIKLAFNNHQE 176
>gi|67470476|ref|XP_651202.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978610|dbj|BAD34972.1| EhRab7E protein [Entamoeba histolytica]
gi|56467907|gb|EAL45816.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449703795|gb|EMD44174.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 198 bits (504), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLK+I++GDSGVGK+SLMNQ++ F+ QYKATIGADF+TKE+ ++ TLQIWDT
Sbjct: 7 KKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIWDT 66
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G+AFYRG+DCC+LV DV + +F+SL W++EFL A+ PFV+L
Sbjct: 67 AGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVVLV 126
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D S VV +WC GNIP +ETSAK +D AFL VA +++ K++
Sbjct: 127 NKMDED-PSKHVVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDVATKVVQS-MKEV 184
Query: 189 YYQPQGI--SETVSEVEQRGGC 208
P G ET S ++ GGC
Sbjct: 185 NNTPSGSINIETTSPEKKEGGC 206
>gi|407035423|gb|EKE37699.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 100/202 (49%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLK+I++GDSGVGK+SLMNQ++ F+ QYKATIGADF+TKE+ ++ TLQIWDT
Sbjct: 7 KKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIWDT 66
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G+AFYRG+DCC+LV DV + +F+SL W++EFL A+ PFV+L
Sbjct: 67 AGHEKFMSFGAAFYRGSDCCLLVLDVTNEASFKSLDTWKKEFLNGANVTNPNDFPFVVLI 126
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D S VV +WC GNIP +ETSAK +D AFL VA +++ K++
Sbjct: 127 NKMDED-PSKHVVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDVATKVVQS-MKEV 184
Query: 189 YYQPQGI--SETVSEVEQRGGC 208
P G ET S ++ GGC
Sbjct: 185 NNTPSGSINIETTSPEKKEGGC 206
>gi|167387463|ref|XP_001738174.1| GTP-binding protein yptV5 [Entamoeba dispar SAW760]
gi|165898751|gb|EDR25535.1| GTP-binding protein yptV5, putative [Entamoeba dispar SAW760]
Length = 207
Score = 198 bits (503), Expect = 1e-48, Method: Compositional matrix adjust.
Identities = 98/202 (48%), Positives = 135/202 (66%), Gaps = 4/202 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLK+I++GDSGVGK+SLMNQ++ F+ QYKATIGADF+TKE+ ++ TLQIWDT
Sbjct: 7 KKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVTINGTATTLQIWDT 66
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G+AFYRG+DCC+LV D+ + +F+SL W++EFL A+ PFV+L
Sbjct: 67 AGHEKFMSFGAAFYRGSDCCLLVLDITNEASFKSLDTWKKEFLNGANVTNPNDFPFVVLV 126
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D S R V +WC GNIP +ETSAK +D AFL +A +++ K++
Sbjct: 127 NKMDED-PSKRAVSVSDVKQWCENNGNIPLYETSAKTGAQVDTAFLDIATKVVQS-MKEV 184
Query: 189 YYQPQGI--SETVSEVEQRGGC 208
P G ET S ++ GGC
Sbjct: 185 NNTPSGSINIETTSPEKKEGGC 206
>gi|209155278|gb|ACI33871.1| Ras-related protein Rab-7a [Salmo salar]
Length = 201
Score = 197 bits (502), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 92/129 (71%), Positives = 110/129 (85%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
++ +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+
Sbjct: 53 TMTSRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTM 112
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E P
Sbjct: 113 QIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFP 172
Query: 124 FVLLGNKID 132
FV+LGNKID
Sbjct: 173 FVVLGNKID 181
>gi|440298742|gb|ELP91373.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 213
Score = 196 bits (497), Expect = 6e-48, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 128/184 (69%), Gaps = 1/184 (0%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R L+K+I++GDSGVGK+ LMNQ++ F +YKATIGADF+T+EL ++ V LQ+WDT
Sbjct: 6 KRPLIKMILIGDSGVGKSCLMNQFINKAFVSEYKATIGADFLTRELDVNGDQVALQVWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G AFYRG++CC LV DV +K+FESL W+ EF+K A P PFV+L
Sbjct: 66 AGHEKFMSFGQAFYRGSECCFLVCDVTNEKSFESLDTWKAEFIKGACPSNPSEFPFVVLA 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D ++RVV ++ +W + +IPY+ETSAK +++EAF+ VA +K KD
Sbjct: 126 NKVDED-ANTRVVTAQQLKDWSSRNNDIPYYETSAKTGMHVEEAFINVANRVMKAIKKDT 184
Query: 189 YYQP 192
QP
Sbjct: 185 SSQP 188
>gi|449266697|gb|EMC77718.1| Ras-related protein Rab-9A [Columba livia]
Length = 201
Score = 194 bits (494), Expect = 1e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D VT+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D R V ++A +WC GN PYFETSAK+ N+ AF L +E +
Sbjct: 124 NKVDID---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 189 YY 190
++
Sbjct: 181 HF 182
>gi|440302747|gb|ELP95054.1| GTP-binding protein YPTC5, putative [Entamoeba invadens IP1]
Length = 206
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 136/203 (66%), Gaps = 5/203 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
++ LLK+I++GDSGVGK+SLMNQ++ F+ QYKATIGADF+TKE+ ++ VTLQIWDT
Sbjct: 6 KKVLLKMILIGDSGVGKSSLMNQFIEKTFTAQYKATIGADFLTKEVSINGTAVTLQIWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG E+F S G+AFYRG+DCC+LV DV +++F+SL W++EFL A+ + PFV+L
Sbjct: 66 AGHEKFMSFGAAFYRGSDCCLLVLDVTNEQSFKSLDTWKKEFLNGANVTNPKDFPFVVLI 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D S V +WC G IPY+ETSAK +D+AFL VA +++ K++
Sbjct: 126 NKMDED-PSKHTVNVNAVKQWCENNGAIPYYETSAKTGLRVDQAFLDVATKVVQS-MKEV 183
Query: 189 YYQPQG---ISETVSEVEQRGGC 208
P G I T ++ G C
Sbjct: 184 TTAPSGSINIENTPPPKKESGCC 206
>gi|71659798|ref|XP_821619.1| rab7 GTP binding protein [Trypanosoma cruzi strain CL Brener]
gi|70887003|gb|EAN99768.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 194 bits (494), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 131/193 (67%), Gaps = 27/193 (13%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV KF +YKATIGADF+TK+L+++ +LVTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G+ ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQA--GKRDS---VLIG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGN--------------------IPYFETSAKEDCN 168
NK TD R V K A WCA + + YFETSAKE+
Sbjct: 119 NK--TDLADRRQVASKTAQAWCAAQSGETAAASGGSSITASGSGGCCMRYFETSAKENTG 176
Query: 169 IDEAFLCVAEIAL 181
++EAF+ +A AL
Sbjct: 177 VEEAFIAIATAAL 189
>gi|407408272|gb|EKF31779.1| rab7 GTP binding protein, putative, partial [Trypanosoma cruzi
marinkellei]
Length = 259
Score = 194 bits (492), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 107/200 (53%), Positives = 137/200 (68%), Gaps = 28/200 (14%)
Query: 3 ISVNMK-RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLV 61
+ VNM +R LLK+I+LGDSGVGKTSLM+QYV KF +YKATIGADF+TK+L+++ ++V
Sbjct: 35 VCVNMSSKRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQVV 94
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G+ ++
Sbjct: 95 TLQIWDTAGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQA--GKRDS 152
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYR---------GN-----------IPYFET 161
VL+GNK TD R V K A WCA + GN + YFET
Sbjct: 153 ---VLIGNK--TDLADRRQVASKTAQAWCAAQSGEAAASNGGNSIIASGSGGCCMRYFET 207
Query: 162 SAKEDCNIDEAFLCVAEIAL 181
SAKE+ ++EAF+ +A AL
Sbjct: 208 SAKENTGVEEAFIAIATAAL 227
>gi|224042776|ref|XP_002197799.1| PREDICTED: ras-related protein Rab-9A [Taeniopygia guttata]
Length = 201
Score = 194 bits (492), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 93/182 (51%), Positives = 127/182 (69%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK SLMN+YV NKF Q TIG +F+ KEL++D VT+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKISLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D D R V ++A +WC GN PYFETSAK+ N+ AF L +E +
Sbjct: 124 NKVDID---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 189 YY 190
++
Sbjct: 181 HF 182
>gi|224005987|ref|XP_002291954.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220972473|gb|EED90805.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 190
Score = 193 bits (491), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 105/191 (54%), Positives = 129/191 (67%), Gaps = 20/191 (10%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD------KLVT 62
++++LK+++LGDSGVGKTSLMN+Y NKF+ QYKATIGADF++K + + D + VT
Sbjct: 1 KKHMLKLVILGDSGVGKTSLMNRYHSNKFTGQYKATIGADFLSKHVSITDPQTGSIRNVT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERFQSLG AFYRGAD LVYDV K+F+ L+NWR EFLKQ E
Sbjct: 61 LQIWDTAGQERFQSLGVAFYRGADAVALVYDVGDAKSFDHLENWRGEFLKQVGLDERGGG 120
Query: 123 -----PFVLLGNKIDTDGGSSRVVPQKKALEWC--------AYRGNIPYFETSAKEDCNI 169
PFVLLGNKID G R VP++ A EWC G IP+FE SAK N+
Sbjct: 121 GGAGFPFVLLGNKIDRPEGERR-VPRQLAEEWCERAGLGGEMGGGPIPHFEVSAKTSDNV 179
Query: 170 DEAFLCVAEIA 180
+ AFL +A +A
Sbjct: 180 EGAFLELATLA 190
>gi|343472019|emb|CCD15702.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 220
Score = 192 bits (489), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 110/229 (48%), Positives = 141/229 (61%), Gaps = 32/229 (13%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +R LLK+I+LGDSGVGKTSLM+QYV KF +YKATIGADF+TK++ +D KLVTLQ
Sbjct: 1 MSATKRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFLTKDIDVDGKLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLGSAFYRGAD CVLV+D+ +F + +W EEF QA +
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADACVLVFDITQSDSFSHINSWLEEFRAQAGLRDS----- 115
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGN------------------IPYFETSAKED 166
VL+GNK +D R V + A WC N I YFE SAK++
Sbjct: 116 VLIGNK--SDLADRRQVASRTAEAWCESLSNRSESGQVQGGARTGEVEQIMYFEASAKDN 173
Query: 167 CNIDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQR---GGCAC 210
++++AFL VA AL K ++ PQ I + +V+ R GCAC
Sbjct: 174 VSVEDAFLAVARSALAKKATAEEDVALPQSIK--LGQVKPRPSNTGCAC 220
>gi|440295577|gb|ELP88489.1| hypothetical protein EIN_344190 [Entamoeba invadens IP1]
Length = 206
Score = 192 bits (489), Expect = 6e-47, Method: Compositional matrix adjust.
Identities = 98/203 (48%), Positives = 136/203 (66%), Gaps = 3/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++NL K+I+LGDSGVGKTSL+NQYV +FS QYKATIGADF+TK++ +++K +LQIWD
Sbjct: 6 KKKNLYKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINEKQSSLQIWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERF S G+AFYRGAD C+LV DV V ++FE L+ WR+EF+ +P + E P+V++
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVVESFEHLEVWRKEFISGGNPSDPETFPYVVI 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK+D + ++R V ++ +WC G YFE SAK N+D AF A + + + KD
Sbjct: 126 ANKVDCE-PANRAVSTEQLRQWCVTSG-YEYFECSAKTGWNVDSAFTKAATL-VASRQKD 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ Q S + EQ C
Sbjct: 183 VPQQEPLPSVQIDLQEQPKKTGC 205
>gi|390358987|ref|XP_003729379.1| PREDICTED: ras-related protein Rab-9A-like [Strongylocentrotus
purpuratus]
Length = 207
Score = 192 bits (488), Expect = 7e-47, Method: Compositional matrix adjust.
Identities = 97/204 (47%), Positives = 139/204 (68%), Gaps = 6/204 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R LLKV++LGD GVGK+SLMN++V NKF Q+ TIG +F+ K++ ++ + T+QIWDT
Sbjct: 5 RPMLLKVVILGDGGVGKSSLMNRFVSNKFEQESFHTIGVEFLNKDIVVEGETFTVQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L Y V+ +++F +L W++EFL AD + E PFVLLG
Sbjct: 65 AGQERFKSLRTPFYRGSDCCMLTYGVDDRQSFHNLTMWKKEFLYYADIADGENFPFVLLG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLC----VAEIALKNE 184
NK+D + R V +A +WCA GN+PY+ETSAK N++EAF+ V E+ KN+
Sbjct: 125 NKVDVE-SDKRQVGVDEAKQWCADNGNVPYYETSAKTAVNVEEAFIAAVRRVVELDRKND 183
Query: 185 HKDIYYQPQGISETVSEVEQRGGC 208
KD P +++ S V ++ C
Sbjct: 184 VKDD-VNPINLNQKPSTVHKKSDC 206
>gi|56711266|ref|NP_001008678.1| ras-related protein Rab-9A [Gallus gallus]
gi|326913634|ref|XP_003203141.1| PREDICTED: ras-related protein Rab-9A-like [Meleagris gallopavo]
gi|53127350|emb|CAG31058.1| hypothetical protein RCJMB04_1p1 [Gallus gallus]
Length = 201
Score = 192 bits (488), Expect = 8e-47, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 128/182 (70%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VTLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + R V ++A +WC GN PYFETSAK+ N+ AF L +E +
Sbjct: 124 NKVDIN---ERQVSTEEAQDWCRNNGNHPYFETSAKDATNVAAAFEEAVRRVLASEDRSD 180
Query: 189 YY 190
++
Sbjct: 181 HF 182
>gi|67483055|ref|XP_656820.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978604|dbj|BAD34969.1| EhRab7B protein [Entamoeba histolytica]
gi|56474045|gb|EAL51436.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407044644|gb|EKE42730.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449708173|gb|EMD47684.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 207
Score = 192 bits (487), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 138/206 (66%), Gaps = 7/206 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+RNL K+I+LGDSGVGKTSL+NQYV +FS QYKATIGADF+TK++ ++D+ ++LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERF S G+AFYRGAD C+LV DV V ++FE L+ WR+EF+ +P + E+ P+V++
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D + ++R V + +WC G +FE SAK N+D AF A + + +
Sbjct: 126 ANKNDCE-PANRAVSSDQLRQWCVTNG-YEFFECSAKTGWNVDSAFTKAATLVAMRQKE- 182
Query: 188 IYYQPQGISETVSEVEQ---RGGCAC 210
QP+ + +++ + C+C
Sbjct: 183 -VPQPEPLPSVQIDLQPDKTQSSCSC 207
>gi|167395260|ref|XP_001741296.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165894193|gb|EDR22255.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 207
Score = 191 bits (485), Expect = 1e-46, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 138/206 (66%), Gaps = 7/206 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+RNL K+I+LGDSGVGKTSL+NQYV +FS QYKATIGADF+TK++ ++D+ ++LQIWD
Sbjct: 6 KKRNLFKIIILGDSGVGKTSLLNQYVTKQFSSQYKATIGADFMTKDITINDQQISLQIWD 65
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAG ERF S G+AFYRGAD C+LV DV V ++FE L+ WR+EF+ +P + E+ P+V++
Sbjct: 66 TAGHERFASFGTAFYRGADVCMLVCDVTVAESFEHLEVWRKEFISGGNPSDPESFPYVVI 125
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D + ++R V + +WC G +FE SAK N+D AF A + + +
Sbjct: 126 ANKNDCE-PANRAVSSDQLRQWCITNG-YEFFECSAKTGWNVDSAFTKAATLVAMRQKE- 182
Query: 188 IYYQPQGISETVSEVEQ---RGGCAC 210
QP+ + +++ + C+C
Sbjct: 183 -VPQPEPLPSVQIDLQPDKTQSSCSC 207
>gi|395526957|ref|XP_003765620.1| PREDICTED: ras-related protein Rab-9A [Sarcophilus harrisii]
Length = 202
Score = 191 bits (484), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 92/182 (50%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 5 KSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 65 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NKID S R V ++A WC GN PYFETSAK+ N+ AF L E +
Sbjct: 125 NKIDI---SERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRILATEDRSD 181
Query: 189 YY 190
++
Sbjct: 182 HF 183
>gi|4895063|gb|AAD32707.1|AF146042_1 GTP-binding protein [Trypanosoma cruzi]
gi|407847514|gb|EKG03204.1| rab7 GTP binding protein, putative [Trypanosoma cruzi]
Length = 221
Score = 190 bits (483), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 103/193 (53%), Positives = 131/193 (67%), Gaps = 27/193 (13%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV KF +YKATIGADF+TK+L+++ +LVTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNKKFDSRYKATIGADFLTKDLELNGQLVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G+ ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFSHISSWLEEFNIQA--GKRDS---VLIG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGN--------------------IPYFETSAKEDCN 168
NK TD R V K A WCA + + YFETSAKE+
Sbjct: 119 NK--TDLADRRQVASKTAQAWCAAQSGEAAAASGGSSITASGSGGCCMRYFETSAKENTG 176
Query: 169 IDEAFLCVAEIAL 181
++EAF+ +A AL
Sbjct: 177 VEEAFIAIATAAL 189
>gi|118404508|ref|NP_001072679.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|115313754|gb|AAI24009.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|163915450|gb|AAI57274.1| RAB9B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 201
Score = 190 bits (483), Expect = 3e-46, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L +WR+EF+ AD E + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSSWRKEFILYADVKEPDRFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D S R + A WC G PY ETSAK+D N+D AF
Sbjct: 127 DK---SEREISTVDAETWCNENGGYPYLETSAKDDTNVDGAF 165
>gi|403344496|gb|EJY71594.1| GTP-binding protein [Oxytricha trifallax]
gi|403370683|gb|EJY85209.1| GTP-binding protein [Oxytricha trifallax]
Length = 246
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 83/175 (47%), Positives = 130/175 (74%), Gaps = 1/175 (0%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+KV+ +GDSGVGKTSL+ + +++F++ +K TIGADF KE+ ++ K+VTLQIWDTAGQ
Sbjct: 32 FVKVVAIGDSGVGKTSLIQMFEHSRFTEAFKPTIGADFSNKEVSINGKIVTLQIWDTAGQ 91
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+QSLG+AFYRGADCC++ YD++ +FE++ W++ F+++ E PF+++GNK+
Sbjct: 92 ERYQSLGTAFYRGADCCLIAYDLSNSSSFENITQWKQSFMQKGMIVNPETFPFMIVGNKL 151
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
D SR V ++ A +C GN+P+ ETSA+ + N+++AF+ +AEIALK + +
Sbjct: 152 DI-AEDSRQVSEQAAKRYCQENGNMPHVETSARNNVNVEQAFVQLAEIALKRQEE 205
>gi|291190162|ref|NP_001167341.1| ras-related protein Rab-9A [Salmo salar]
gi|223649322|gb|ACN11419.1| Ras-related protein Rab-9A [Salmo salar]
Length = 201
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/184 (50%), Positives = 125/184 (67%), Gaps = 3/184 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF TIG +F+ K+L++D +LVT+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDTHLFHTIGVEFLNKDLEVDGRLVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFHNLANWKKEFIYYADVKEPEKFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D S R V + A +WC GN PY+ETSAK+ N+ AF L E +
Sbjct: 124 NKVDV---SERQVSAEDAQQWCRENGNHPYYETSAKDSTNVTIAFEEAVRRVLATEERAD 180
Query: 189 YYQP 192
+ P
Sbjct: 181 HLIP 184
>gi|194742730|ref|XP_001953854.1| GF17026 [Drosophila ananassae]
gi|190626891|gb|EDV42415.1| GF17026 [Drosophila ananassae]
Length = 207
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 92/180 (51%), Positives = 124/180 (68%), Gaps = 3/180 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++L KVIV+G+ GVGKTSL+ +YV +FS + + TIG + TKE+++DD+ VTLQ
Sbjct: 1 MNCGKKSLFKVIVIGEEGVGKTSLVRRYVEGRFSIRERNTIGLNLSTKEVRVDDRAVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERF L S FYRG DCCVLV+D+ +F+SL WR++FL +ADP + PF
Sbjct: 61 IWDTAGQERFLCLSSCFYRGVDCCVLVFDITSLDSFKSLGMWRDQFLIKADPRDPVNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
++LGNK+D D VP + EWC NI Y+ETSAKE N+ AF ++ ALK E
Sbjct: 121 IVLGNKVDLDNSH---VPNNRVKEWCQRNNNISYYETSAKEGTNLHLAFKALSTKALKRE 177
>gi|417408606|gb|JAA50847.1| Putative ras-related protein rab-9a, partial [Desmodus rotundus]
Length = 202
Score = 190 bits (482), Expect = 4e-46, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D VT+QIWDT
Sbjct: 5 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKELEVDGHFVTMQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 65 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 124
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 125 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 166
>gi|449269967|gb|EMC80702.1| Ras-related protein Rab-9B [Columba livia]
Length = 201
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIHYADVKDPEHFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERQVSTEEAQTWCIENGNYPYLETSAKDDTNVAVAF 165
>gi|148222619|ref|NP_001084671.1| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|46249558|gb|AAH68782.1| Rab9a-a protein [Xenopus laevis]
Length = 201
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 122/165 (73%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLK+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D LVT+QIWDT
Sbjct: 4 KSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD + ++ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKDPDSFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC GN PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---TDRQVSVEEAQAWCRDNGNHPYFETSAKDATNVAAAF 165
>gi|157824109|ref|NP_001102488.1| ras-related protein Rab-9B [Rattus norvegicus]
gi|149033183|gb|EDL87990.1| rCG56886 [Rattus norvegicus]
Length = 201
Score = 189 bits (480), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>gi|354499882|ref|XP_003512033.1| PREDICTED: ras-related protein Rab-9B-like [Cricetulus griseus]
Length = 201
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---ERQVTTQEAEAWCMENGNYPYLETSAKDDTNVTVAF 165
>gi|395860483|ref|XP_003802542.1| PREDICTED: ras-related protein Rab-9B [Otolemur garnettii]
Length = 201
Score = 189 bits (480), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>gi|348554563|ref|XP_003463095.1| PREDICTED: ras-related protein Rab-9A-like [Cavia porcellus]
Length = 201
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 121/165 (73%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKVDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|224098602|ref|XP_002188069.1| PREDICTED: ras-related protein Rab-9B [Taeniopygia guttata]
Length = 201
Score = 189 bits (479), Expect = 7e-46, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPEHFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERQVSTEEARAWCMENGNYPYLETSAKDDTNVTVAF 165
>gi|154335561|ref|XP_001564019.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|18997099|gb|AAL83291.1|AF474147_1 Rab7-like protein [Leishmania braziliensis]
gi|134061050|emb|CAM38069.1| putative rab7 GTP binding protein [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 223
Score = 189 bits (479), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 144/227 (63%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV + F +YKATIGADF++K+++++ ++VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVSHTFDSRYKATIGADFLSKDVEVNGRVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFAHIGSWMEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRG--------------------NIPYFETSAKEDCN 168
NK D + R V K WCA + + YFETSAKE+
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAAAANANNGAGAGADDSAAPEMKYFETSAKENAG 176
Query: 169 IDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQ---RGGCAC 210
+++AF+ VA++AL K ++ PQ ++ ++ Q C+C
Sbjct: 177 VEDAFIAVAQLALAKKATVEETTPMPQTVNLNQAQTPQTTSSSACSC 223
>gi|355714983|gb|AES05185.1| RAB9A, member RAS oncoprotein family [Mustela putorius furo]
Length = 207
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 11 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 70
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 71 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 130
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 131 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 172
>gi|118404644|ref|NP_001072637.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|116063511|gb|AAI23092.1| RAB9A, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|166796947|gb|AAI58965.1| rab9a protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 122/165 (73%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLK+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D LVT+QIWDT
Sbjct: 4 KSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHLVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD + ++ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIYYADVKDPDSFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC GN PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---TDRQVSVEEAQAWCRDNGNNPYFETSAKDATNVAAAF 165
>gi|113676266|ref|NP_001038931.1| ras-related protein Rab-9A [Danio rerio]
gi|339715149|ref|NP_001229903.1| ras-related protein Rab-9A [Danio rerio]
gi|112419160|gb|AAI22265.1| Zgc:153391 [Danio rerio]
gi|182889508|gb|AAI65268.1| Zgc:153391 protein [Danio rerio]
Length = 201
Score = 189 bits (479), Expect = 9e-46, Method: Compositional matrix adjust.
Identities = 90/165 (54%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+SLMN+YV NKF TIG +F+ K+L++D + VTLQIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGRTVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFHNLVNWKKEFIYYADVKEPESFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A EWC G PYFETSAK+ N+ AF
Sbjct: 124 NKLDV---SERQVSSEEAQEWCMESGGYPYFETSAKDATNVAVAF 165
>gi|410988098|ref|XP_004000325.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Felis catus]
gi|410988100|ref|XP_004000326.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Felis catus]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCKDNGDYPYFETSAKDATNVAAAF 165
>gi|50513508|pdb|1S8F|A Chain A, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
gi|50513509|pdb|1S8F|B Chain B, Crystal Structure Of Rab9 Complexed To Gdp Reveals A Dimer
With An Active Conformation Of Switch Ii
Length = 177
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 6 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 66 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 126 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 167
>gi|126336882|ref|XP_001364867.1| PREDICTED: ras-related protein Rab-9A-like [Monodelphis domestica]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/182 (50%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFESQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NKID + R V ++A WC GN PYFETSAK+ N+ AF L E +
Sbjct: 124 NKIDIN---ERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRILATEDRSD 180
Query: 189 YY 190
++
Sbjct: 181 HF 182
>gi|55670683|pdb|1WMS|A Chain A, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
gi|55670684|pdb|1WMS|B Chain B, High Resolution Crystal Structure Of Human Rab9 Gtpase: A
Novel Antiviral Drug Target
Length = 177
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|308044530|ref|NP_001183960.1| ras-related protein Rab-9A [Canis lupus familiaris]
gi|149744245|ref|XP_001489036.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Equus
caballus]
gi|332223869|ref|XP_003261090.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Nomascus
leucogenys]
gi|332223871|ref|XP_003261091.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Nomascus
leucogenys]
gi|332223873|ref|XP_003261092.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Nomascus
leucogenys]
gi|332223875|ref|XP_003261093.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Nomascus
leucogenys]
gi|338729185|ref|XP_003365840.1| PREDICTED: ras-related protein Rab-9A-like [Equus caballus]
gi|585773|sp|P24408.2|RAB9A_CANFA RecName: Full=Ras-related protein Rab-9A
gi|335773329|gb|AEH58356.1| Ras-related protein Rab-9A-like protein [Equus caballus]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|301784154|ref|XP_002927492.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Ailuropoda
melanoleuca]
Length = 206
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 92/186 (49%), Positives = 126/186 (67%), Gaps = 3/186 (1%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
M S+ + +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D
Sbjct: 1 MSGSLPRGKSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHF 60
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
VT+QIWDTAGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E
Sbjct: 61 VTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPE 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
+ PFV+LGNKID + R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 121 SFPFVILGNKIDI---TERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRV 177
Query: 181 LKNEHK 186
L E +
Sbjct: 178 LATEDR 183
>gi|347922198|ref|NP_001231676.1| RAB9A, member RAS oncogene family [Sus scrofa]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|4759012|ref|NP_004242.1| ras-related protein Rab-9A [Homo sapiens]
gi|305855090|ref|NP_001182257.1| ras-related protein Rab-9A [Homo sapiens]
gi|55662400|ref|XP_520935.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Pan troglodytes]
gi|296234923|ref|XP_002762672.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Callithrix
jacchus]
gi|296234925|ref|XP_002762673.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Callithrix
jacchus]
gi|332860283|ref|XP_003317395.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Pan troglodytes]
gi|332860286|ref|XP_003317396.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Pan troglodytes]
gi|397468114|ref|XP_003805740.1| PREDICTED: ras-related protein Rab-9A [Pan paniscus]
gi|403255296|ref|XP_003920377.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Saimiri
boliviensis boliviensis]
gi|403255298|ref|XP_003920378.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Saimiri
boliviensis boliviensis]
gi|403255300|ref|XP_003920379.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Saimiri
boliviensis boliviensis]
gi|403255302|ref|XP_003920380.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Saimiri
boliviensis boliviensis]
gi|410056199|ref|XP_003953981.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395186|ref|XP_004063856.1| PREDICTED: ras-related protein Rab-9A isoform 1 [Gorilla gorilla
gorilla]
gi|426395188|ref|XP_004063857.1| PREDICTED: ras-related protein Rab-9A isoform 2 [Gorilla gorilla
gorilla]
gi|426395190|ref|XP_004063858.1| PREDICTED: ras-related protein Rab-9A isoform 3 [Gorilla gorilla
gorilla]
gi|426395192|ref|XP_004063859.1| PREDICTED: ras-related protein Rab-9A isoform 4 [Gorilla gorilla
gorilla]
gi|1710003|sp|P51151.1|RAB9A_HUMAN RecName: Full=Ras-related protein Rab-9A
gi|20379064|gb|AAM21092.1|AF498944_1 small GTP binding protein RAB9 [Homo sapiens]
gi|1174147|gb|AAC51200.1| small GTP binding protein Rab9 [Homo sapiens]
gi|16878118|gb|AAH17265.1| RAB9A, member RAS oncogene family [Homo sapiens]
gi|47496671|emb|CAG29358.1| RAB9A [Homo sapiens]
gi|60819204|gb|AAX36492.1| RAB9A member RAS oncogene family [synthetic construct]
gi|119619232|gb|EAW98826.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619233|gb|EAW98827.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119619234|gb|EAW98828.1| RAB9A, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|123986037|gb|ABM83750.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|123998960|gb|ABM87069.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|158254442|dbj|BAF83194.1| unnamed protein product [Homo sapiens]
gi|208968713|dbj|BAG74195.1| RAB9A, member RAS oncogene family [synthetic construct]
gi|410215528|gb|JAA04983.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410215530|gb|JAA04984.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267604|gb|JAA21768.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410267606|gb|JAA21769.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298884|gb|JAA28042.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410298886|gb|JAA28043.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329113|gb|JAA33503.1| RAB9A, member RAS oncogene family [Pan troglodytes]
gi|410329115|gb|JAA33504.1| RAB9A, member RAS oncogene family [Pan troglodytes]
Length = 201
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|60654349|gb|AAX29865.1| RAB9A member RAS oncogene family [synthetic construct]
gi|60830658|gb|AAX36939.1| RAB9A member RAS oncogene family [synthetic construct]
Length = 202
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|410056201|ref|XP_003953982.1| PREDICTED: ras-related protein Rab-9A [Pan troglodytes]
gi|426395194|ref|XP_004063860.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Gorilla gorilla
gorilla]
Length = 217
Score = 188 bits (478), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 140 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 181
>gi|323303622|gb|EGA57411.1| Ypt7p [Saccharomyces cerevisiae FostersB]
Length = 146
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 86/128 (67%), Positives = 110/128 (85%), Gaps = 1/128 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTD 134
LGNKID +
Sbjct: 124 LGNKIDAE 131
>gi|432109697|gb|ELK33773.1| Ras-related protein Rab-9A [Myotis davidii]
Length = 201
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDIN---ERQVSAEEAEAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|332223877|ref|XP_003261094.1| PREDICTED: ras-related protein Rab-9A isoform 5 [Nomascus
leucogenys]
Length = 217
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 20 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 79
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 80 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 139
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 140 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 181
>gi|118089366|ref|XP_001232252.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Gallus gallus]
gi|118089368|ref|XP_001232274.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Gallus gallus]
gi|118089370|ref|XP_420182.2| PREDICTED: ras-related protein Rab-9B isoform 3 [Gallus gallus]
Length = 201
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAF 165
>gi|351707182|gb|EHB10101.1| Ras-related protein Rab-9B [Heterocephalus glaber]
Length = 201
Score = 188 bits (477), Expect = 1e-45, Method: Compositional matrix adjust.
Identities = 90/162 (55%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDNRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAKAWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|328868244|gb|EGG16622.1| hypothetical protein DFA_07600 [Dictyostelium fasciculatum]
Length = 224
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 95/179 (53%), Positives = 126/179 (70%), Gaps = 11/179 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-----LVT 62
+++ L K+I++G SGVGKTSL++QYV+ ++ QQ+KATIG DF+TK+LQ+ D VT
Sbjct: 12 QKKYLFKIILIGSSGVGKTSLLSQYVHKRYIQQHKATIGVDFLTKDLQLKDSKGETCSVT 71
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA--DPGEHE 120
LQIWDTAGQERFQSLGSAFYRGADCCVL YDVN Q +FE+L W+ +F+ QA
Sbjct: 72 LQIWDTAGQERFQSLGSAFYRGADCCVLTYDVNDQTSFENLDRWKNDFIHQAAPSSPSSS 131
Query: 121 ACPF--VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
P+ V++GNKID + + R V QK+A WC I YFETSAK+ +++ F +A
Sbjct: 132 PIPYQLVVIGNKIDME--NQRCVSQKRAQAWCTENSVISYFETSAKDHQLVEQTFESIA 188
>gi|28892801|ref|NP_795945.1| ras-related protein Rab-9B [Mus musculus]
gi|62901092|sp|Q8BHH2.1|RAB9B_MOUSE RecName: Full=Ras-related protein Rab-9B
gi|26329943|dbj|BAC28710.1| unnamed protein product [Mus musculus]
gi|26340426|dbj|BAC33876.1| unnamed protein product [Mus musculus]
gi|76826918|gb|AAI07384.1| RAB9B, member RAS oncogene family [Mus musculus]
gi|112292975|dbj|BAF02865.1| Rab9B [Mus musculus]
gi|148691930|gb|EDL23877.1| RAB9B, member RAS oncogene family [Mus musculus]
Length = 201
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>gi|431909795|gb|ELK12941.1| Ras-related protein Rab-9A [Pteropus alecto]
Length = 218
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 21 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 80
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 81 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFIYYADVKEPESFPFVILG 140
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 141 NKVDI---SERQVSAEEARAWCRDNGDCPYFETSAKDATNVAAAF 182
>gi|395840533|ref|XP_003793110.1| PREDICTED: ras-related protein Rab-9A [Otolemur garnettii]
Length = 265
Score = 187 bits (476), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 121/165 (73%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D LVT+QIWDT
Sbjct: 68 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHLVTMQIWDT 127
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 128 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 187
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 188 NKIDIN---ERQVSTEEAQAWCRDNGDCPYFETSAKDATNVAAAF 229
>gi|115495755|ref|NP_001069009.1| ras-related protein Rab-9B [Bos taurus]
gi|426257809|ref|XP_004022515.1| PREDICTED: ras-related protein Rab-9B [Ovis aries]
gi|111305127|gb|AAI20256.1| RAB9B, member RAS oncogene family [Bos taurus]
gi|296470973|tpg|DAA13088.1| TPA: RAB9B, member RAS oncogene family [Bos taurus]
gi|440902539|gb|ELR53321.1| Ras-related protein Rab-9B [Bos grunniens mutus]
Length = 201
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQSWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|122921516|pdb|2OCB|A Chain A, Crystal Structure Of Human Rab9b In Complex With A Gtp
Analogue
Length = 180
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|115495801|ref|NP_001069006.1| ras-related protein Rab-9A [Bos taurus]
gi|240849325|ref|NP_001155342.1| ras-related protein Rab-9A [Ovis aries]
gi|115305150|gb|AAI23544.1| RAB9A, member RAS oncogene family [Bos taurus]
gi|238566792|gb|ACR46633.1| RAB9A [Ovis aries]
gi|296470467|tpg|DAA12582.1| TPA: RAB9A, member RAS oncogene family [Bos taurus]
gi|440911121|gb|ELR60837.1| Ras-related protein Rab-9A [Bos grunniens mutus]
Length = 203
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
NK+D S R V ++A WC G+ PYFETSAK+ N+ AF L E +
Sbjct: 124 NKVDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR 178
>gi|301784156|ref|XP_002927493.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Ailuropoda
melanoleuca]
gi|281340951|gb|EFB16535.1| hypothetical protein PANDA_017274 [Ailuropoda melanoleuca]
Length = 201
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---TERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|344288599|ref|XP_003416035.1| PREDICTED: ras-related protein Rab-9A-like [Loxodonta africana]
Length = 201
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDAQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKVDI---SERQVSAEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|345327021|ref|XP_003431118.1| PREDICTED: ras-related protein Rab-9A-like [Ornithorhynchus
anatinus]
Length = 201
Score = 187 bits (475), Expect = 2e-45, Method: Compositional matrix adjust.
Identities = 90/182 (49%), Positives = 125/182 (68%), Gaps = 3/182 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E ++ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKEPDSFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NKID + R V ++A WC GN PYFETSAK+ N+ AF L E +
Sbjct: 124 NKIDIN---ERQVSTEEAQAWCRDNGNYPYFETSAKDATNVAAAFEEAVRRVLATEDRSD 180
Query: 189 YY 190
++
Sbjct: 181 HF 182
>gi|354493933|ref|XP_003509094.1| PREDICTED: ras-related protein Rab-9A-like [Cricetulus griseus]
gi|344242371|gb|EGV98474.1| Ras-related protein Rab-9A [Cricetulus griseus]
Length = 201
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 91/178 (51%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EFL AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLNNWKKEFLYYADVKEPESFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
NK+D + R V ++A WC G PYFETSAK+ N+ AF L +E K
Sbjct: 124 NKVDIN---ERQVSIEEAQAWCKDNGGHPYFETSAKDSTNVAAAFEEAVRKVLASEEK 178
>gi|311276715|ref|XP_003135320.1| PREDICTED: ras-related protein Rab-9B-like [Sus scrofa]
Length = 201
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|7705963|ref|NP_057454.1| ras-related protein Rab-9B [Homo sapiens]
gi|332861334|ref|XP_003317649.1| PREDICTED: ras-related protein Rab-9B [Pan troglodytes]
gi|397497810|ref|XP_003819697.1| PREDICTED: ras-related protein Rab-9B [Pan paniscus]
gi|410989082|ref|XP_004000796.1| PREDICTED: ras-related protein Rab-9B isoform 1 [Felis catus]
gi|410989084|ref|XP_004000797.1| PREDICTED: ras-related protein Rab-9B isoform 2 [Felis catus]
gi|13124471|sp|Q9NP90.1|RAB9B_HUMAN RecName: Full=Ras-related protein Rab-9B; AltName: Full=Rab-9-like
protein; Short=Rab-9L
gi|6716128|dbj|BAA89542.1| RAB9-like protein [Homo sapiens]
gi|62739495|gb|AAH93756.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|62739957|gb|AAH93758.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|119575076|gb|EAW54689.1| RAB9B, member RAS oncogene family [Homo sapiens]
gi|189066670|dbj|BAG36217.1| unnamed protein product [Homo sapiens]
gi|208968715|dbj|BAG74196.1| RAB9B, member RAS oncogene family [synthetic construct]
Length = 201
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|197099162|ref|NP_001126880.1| ras-related protein Rab-9B [Pongo abelii]
gi|387762927|ref|NP_001248685.1| ras-related protein Rab-9B [Macaca mulatta]
gi|57112293|ref|XP_538124.1| PREDICTED: ras-related protein Rab-9B [Canis lupus familiaris]
gi|149759646|ref|XP_001493021.1| PREDICTED: ras-related protein Rab-9B-like [Equus caballus]
gi|291408011|ref|XP_002720397.1| PREDICTED: RAB9B, member RAS oncogene family [Oryctolagus
cuniculus]
gi|296236087|ref|XP_002763175.1| PREDICTED: ras-related protein Rab-9B [Callithrix jacchus]
gi|301781102|ref|XP_002925966.1| PREDICTED: ras-related protein Rab-9B-like [Ailuropoda melanoleuca]
gi|332226011|ref|XP_003262182.1| PREDICTED: ras-related protein Rab-9B [Nomascus leucogenys]
gi|344286250|ref|XP_003414872.1| PREDICTED: ras-related protein Rab-9B-like [Loxodonta africana]
gi|402910983|ref|XP_003918124.1| PREDICTED: ras-related protein Rab-9B [Papio anubis]
gi|403307676|ref|XP_003944311.1| PREDICTED: ras-related protein Rab-9B [Saimiri boliviensis
boliviensis]
gi|426396923|ref|XP_004064678.1| PREDICTED: ras-related protein Rab-9B [Gorilla gorilla gorilla]
gi|62901072|sp|Q5R4W9.1|RAB9B_PONAB RecName: Full=Ras-related protein Rab-9B
gi|55733023|emb|CAH93197.1| hypothetical protein [Pongo abelii]
gi|281342621|gb|EFB18205.1| hypothetical protein PANDA_015552 [Ailuropoda melanoleuca]
gi|355705029|gb|EHH30954.1| Rab-9-like protein [Macaca mulatta]
gi|355757583|gb|EHH61108.1| Rab-9-like protein [Macaca fascicularis]
gi|380813406|gb|AFE78577.1| ras-related protein Rab-9B [Macaca mulatta]
gi|383413739|gb|AFH30083.1| ras-related protein Rab-9B [Macaca mulatta]
gi|444520574|gb|ELV13029.1| Ras-related protein Rab-9B [Tupaia chinensis]
Length = 201
Score = 187 bits (475), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|302564661|ref|NP_001181837.1| ras-related protein Rab-9A [Macaca mulatta]
gi|297303344|ref|XP_001116851.2| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Macaca
mulatta]
gi|297303348|ref|XP_002806190.1| PREDICTED: ras-related protein Rab-9A-like isoform 3 [Macaca
mulatta]
gi|402909528|ref|XP_003917469.1| PREDICTED: ras-related protein Rab-9A [Papio anubis]
gi|49036027|gb|AAT48712.1| RAS-related GTP binding protein [Chlorocebus aethiops]
gi|90079749|dbj|BAE89554.1| unnamed protein product [Macaca fascicularis]
gi|355559482|gb|EHH16210.1| Ras-related protein Rab-9A [Macaca mulatta]
gi|355757191|gb|EHH60716.1| Ras-related protein Rab-9A [Macaca fascicularis]
gi|380818058|gb|AFE80903.1| ras-related protein Rab-9A [Macaca mulatta]
gi|383410997|gb|AFH28712.1| ras-related protein Rab-9A [Macaca mulatta]
gi|384950394|gb|AFI38802.1| ras-related protein Rab-9A [Macaca mulatta]
Length = 201
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E ++ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPDSFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>gi|300120301|emb|CBK19855.2| unnamed protein product [Blastocystis hominis]
Length = 208
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/205 (44%), Positives = 134/205 (65%), Gaps = 3/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
KRR+ LK+I+LGDS VGKT ++ Q+V+NKFS +YK+TIGADF +++ +D+ ++QIWD
Sbjct: 5 KRRSSLKLIILGDSSVGKTCIIQQFVFNKFSDKYKSTIGADFFPRDVMIDNTPYSVQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQER+QSLGS+FYRG D C+L +D+ KTF++L+ W++EFL A P + PFV++
Sbjct: 65 TAGQERYQSLGSSFYRGTDACILAFDLTNAKTFKNLEKWQDEFLVTAAPADPLNFPFVIV 124
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNK+D S R+V +++ EW R + YFETSAKE+ NI+ A V A+ +
Sbjct: 125 GNKVDV-PESERMVTKEEVEEWARSRRVTTMHYFETSAKENINIEAAIFDVLRQAIAQKE 183
Query: 186 KDIYYQPQGISETVSEVEQRGGCAC 210
+ Y P + + C C
Sbjct: 184 GEEEYVPDVVDLDAVKPATTEKCNC 208
>gi|398013821|ref|XP_003860102.1| rab7 GTP binding protein, putative [Leishmania donovani]
gi|322498321|emb|CBZ33395.1| rab7 GTP binding protein, putative [Leishmania donovani]
Length = 223
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 145/227 (63%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV + F +YKATIGADF++K+++++ ++VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRG--------------------NIPYFETSAKEDCN 168
NK D + R V K WCA + + YFETSAK++
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAEAANVNNGAGAGAGDSAAPEMKYFETSAKDNAG 176
Query: 169 IDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQ---RGGCAC 210
++EAF+ V ++AL K ++ PQ ++ + ++ EQ C+C
Sbjct: 177 VEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|226495637|ref|NP_001152475.1| ras-related protein Rab7 [Zea mays]
gi|195656657|gb|ACG47796.1| ras-related protein Rab7 [Zea mays]
Length = 194
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 92/144 (63%), Positives = 107/144 (74%), Gaps = 1/144 (0%)
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFY+GADCCVLVYDVNV K+FE L NWREEFL QA P + E PFV+L
Sbjct: 51 TAGQERFQSLGVAFYKGADCCVLVYDVNVSKSFEKLNNWREEFLIQASPSDPENFPFVVL 110
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SR V +KKA WCA +GNIPYFETSAKE N++ AF C+A A+KNE ++
Sbjct: 111 GNKIDVDGGNSRTVSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFECIARNAVKNEPEE 170
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I + +QR GC C
Sbjct: 171 DMYLPDTIDVGGAGRQQRSSGCEC 194
>gi|71026212|ref|XP_762790.1| small GTP-binding protein Rab7 [Theileria parva strain Muguga]
gi|68349742|gb|EAN30507.1| small GTP-binding protein rab7, putative [Theileria parva]
Length = 192
Score = 187 bits (474), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 93/180 (51%), Positives = 121/180 (67%), Gaps = 3/180 (1%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MNQ++ +F+ QY+ATIGADF+T + +DDK VTLQIWDTAGQERFQSLG+AFYRGAD C
Sbjct: 1 MNQFINKRFTNQYRATIGADFLTMGITVDDKEVTLQIWDTAGQERFQSLGTAFYRGADGC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
+LVYD QKTFES+++W+ EFL Q DP + PF L+GNKI D ++ V KAL
Sbjct: 61 MLVYDTTNQKTFESIESWKSEFLIQIDPKSPDTFPFALVGNKI--DDTENKKVSTNKALS 118
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA-LKNEHKDIYYQPQGISETVSEVEQRGG 207
WC +IP FETSAK N+ AF +A+ A L++ D Y P+ + V++ G
Sbjct: 119 WCKANNDIPLFETSAKTSLNVANAFNEIAKRAVLRDIQDDEVYIPETLLLDRRNVQRSAG 178
>gi|327268250|ref|XP_003218911.1| PREDICTED: ras-related protein Rab-9A-like isoform 1 [Anolis
carolinensis]
gi|327268252|ref|XP_003218912.1| PREDICTED: ras-related protein Rab-9A-like isoform 2 [Anolis
carolinensis]
Length = 201
Score = 186 bits (473), Expect = 3e-45, Method: Compositional matrix adjust.
Identities = 88/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+S+MN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLLKVILLGDGGVGKSSIMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD + E PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLGNWKKEFIYYADVKDPETFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D S R V ++A WC GN PYFETSAK+ N+ AF
Sbjct: 124 NKVDI---SERQVSTEEAQLWCRNNGNHPYFETSAKDATNVAAAF 165
>gi|432933159|ref|XP_004081834.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 201
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 94/203 (46%), Positives = 134/203 (66%), Gaps = 7/203 (3%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+S+MN+YV NKF TIG +F+ K+L++D + VTLQIWDT
Sbjct: 4 KTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDSRQVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDHQSFLNLGNWKKEFIYYADVKEPEKFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + R V ++A +WC G+ PY+ETSAK+ N+ AF L E + +
Sbjct: 124 NKVDV---TERQVSTEEARQWCQENGDYPYYETSAKDATNVAVAFEEAVRRVLAAEERTV 180
Query: 189 YYQPQGISETVS-EVEQRGGCAC 210
+ P ++TV + R AC
Sbjct: 181 HLIP---TDTVKLHRKPRSAAAC 200
>gi|334350516|ref|XP_001374469.2| PREDICTED: ras-related protein Rab-9B-like [Monodelphis domestica]
Length = 201
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DK---VERQVTTEEAQAWCVEHGDYPYLETSAKDDTNVTVAF 165
>gi|339897895|ref|XP_003392405.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
gi|321399296|emb|CBZ08564.1| putative rab7 GTP binding protein [Leishmania infantum JPCM5]
Length = 223
Score = 186 bits (473), Expect = 4e-45, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 145/227 (63%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV + F +YKATIGADF++K+++++ ++VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRG--------------------NIPYFETSAKEDCN 168
NK D + R V K WCA + + YFETSAK++
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAEAANANNGAGAGAGDSAAPEMKYFETSAKDNAG 176
Query: 169 IDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQ---RGGCAC 210
++EAF+ V ++AL K ++ PQ ++ + ++ EQ C+C
Sbjct: 177 VEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|348570462|ref|XP_003471016.1| PREDICTED: ras-related protein Rab-9B-like [Cavia porcellus]
Length = 201
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTIEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>gi|401419226|ref|XP_003874103.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
gi|322490337|emb|CBZ25597.1| putative rab7 GTP binding protein [Leishmania mexicana
MHOM/GT/2001/U1103]
Length = 223
Score = 186 bits (472), Expect = 5e-45, Method: Compositional matrix adjust.
Identities = 104/227 (45%), Positives = 145/227 (63%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV F +YKATIGADF++K+++++ ++VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGRVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYR-----------------GNIP---YFETSAKEDCN 168
NK D + R V K WCA + +P YFETSAK++
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAEAANANNGAGAGAGDSAVPEMKYFETSAKDNAG 176
Query: 169 IDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQ---RGGCAC 210
++EAF+ V ++AL K ++ PQ ++ + ++ EQ C+C
Sbjct: 177 VEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQQEQAPSSSACSC 223
>gi|294894152|ref|XP_002774747.1| Rab7, putative [Perkinsus marinus ATCC 50983]
gi|239880304|gb|EER06563.1| Rab7, putative [Perkinsus marinus ATCC 50983]
Length = 122
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/122 (72%), Positives = 102/122 (83%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+S +++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DDK+VT
Sbjct: 1 MSSAPRKKVLLKVIILGDSGVGKTSLMNQYVNKKFSPQYKATIGADFLTKEVTIDDKVVT 60
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQIWDTAGQERFQSLG AFYRGADCC LVYD+ K+FESL +WR+EFL QA P + E
Sbjct: 61 LQIWDTAGQERFQSLGMAFYRGADCCCLVYDITNPKSFESLDSWRDEFLIQASPKDPEEF 120
Query: 123 PF 124
PF
Sbjct: 121 PF 122
>gi|395546391|ref|XP_003775071.1| PREDICTED: ras-related protein Rab-9B [Sarcophilus harrisii]
Length = 201
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 119/162 (73%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLSNWQKEFIYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DK---VERQVTTEEAKAWCLEHGDYPYLETSAKDDTNVTVAF 165
>gi|156365727|ref|XP_001626795.1| predicted protein [Nematostella vectensis]
gi|156213684|gb|EDO34695.1| predicted protein [Nematostella vectensis]
Length = 206
Score = 186 bits (471), Expect = 7e-45, Method: Compositional matrix adjust.
Identities = 87/170 (51%), Positives = 122/170 (71%), Gaps = 3/170 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ LLKV++LGD GVGK+SLMN++V KF Q TIG +F+ K++++D + TLQIWDT
Sbjct: 4 KSTLLKVVLLGDGGVGKSSLMNRFVCGKFDTQSFHTIGVEFLNKDVKLDGESYTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+D C+LVY V+ K+F +L W++EFL AD + E PF+LLG
Sbjct: 64 AGQERFKSLRTPFYRGSDLCLLVYAVDDAKSFTNLSMWKKEFLYYADVRDQENFPFILLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
NK+D +G R V Q++A WC G +PYFETSAK+ N+++AF+ +
Sbjct: 124 NKVDVEG---RAVSQEEADSWCRQNGGVPYFETSAKDSTNVNDAFIAAVK 170
>gi|149640015|ref|XP_001511645.1| PREDICTED: ras-related protein Rab-9B-like [Ornithorhynchus
anatinus]
Length = 201
Score = 185 bits (470), Expect = 8e-45, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFVYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DK---TERQVTTEEAKAWCMENGDYPYLETSAKDDTNVAVAF 165
>gi|73535737|pdb|1YZL|A Chain A, Gppnhp-Bound Rab9 Gtpase
Length = 179
Score = 185 bits (470), Expect = 9e-45, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 8 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 67
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 68 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 127
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 128 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 169
>gi|327287924|ref|XP_003228678.1| PREDICTED: ras-related protein Rab-9B-like [Anolis carolinensis]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV N+F Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNRFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L +WR+EF+ A+ + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGHWRKEFVCYANIRDPDRFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D RVV ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERVVGPEEARAWCLEHGNYPYLETSAKDDTNVAVAF 165
>gi|9790227|ref|NP_062747.1| ras-related protein Rab-9A [Mus musculus]
gi|46577134|sp|Q9R0M6.1|RAB9A_MOUSE RecName: Full=Ras-related protein Rab-9A; AltName: Full=Sid 99
gi|5931616|dbj|BAA84709.1| small GTP binding protein [Mus musculus]
gi|12846351|dbj|BAB27135.1| unnamed protein product [Mus musculus]
gi|12856474|dbj|BAB30681.1| unnamed protein product [Mus musculus]
gi|14919428|gb|AAH08160.1| RAB9, member RAS oncogene family [Mus musculus]
gi|26327959|dbj|BAC27720.1| unnamed protein product [Mus musculus]
gi|112292973|dbj|BAF02864.1| Rab9A [Mus musculus]
gi|148708778|gb|EDL40725.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708779|gb|EDL40726.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708780|gb|EDL40727.1| mCG116026, isoform CRA_a [Mus musculus]
gi|148708781|gb|EDL40728.1| mCG116026, isoform CRA_a [Mus musculus]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>gi|62906854|sp|Q99P75.2|RAB9A_RAT RecName: Full=Ras-related protein Rab-9A
gi|47124150|gb|AAH70502.1| RAB9A, member RAS oncogene family [Rattus norvegicus]
gi|149035885|gb|EDL90552.1| RAB9, member RAS oncogene family, isoform CRA_a [Rattus norvegicus]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>gi|16758200|ref|NP_445910.1| ras-related protein Rab-9A [Rattus norvegicus]
gi|12240243|gb|AAG49586.1|AF325692_1 small GTP binding protein Rab9 [Rattus norvegicus]
Length = 201
Score = 185 bits (469), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVANKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>gi|123419727|ref|XP_001305617.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736252|gb|AAX97455.1| small Rab GTPase Rab7c [Trichomonas vaginalis]
gi|121887146|gb|EAX92687.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 184 bits (468), Expect = 1e-44, Method: Compositional matrix adjust.
Identities = 92/203 (45%), Positives = 128/203 (63%), Gaps = 4/203 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+ R +LKV+ LGD+G GKT L+NQYV +FS YK TIG+DF +K++++D K VTLQIWD
Sbjct: 4 RARTMLKVLFLGDTGAGKTCLLNQYVSREFSSDYKVTIGSDFTSKQVEIDGKFVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLGS F+RG DC +LVYDV K+FE++ W+ +F++Q + + PF+LL
Sbjct: 64 TAGQERFQSLGSTFFRGTDCLILVYDVTNAKSFENINKWKNDFVRQLELKQDSNFPFLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D ++VV A E+ G I + E SAK + AF + AL+N H D
Sbjct: 124 GNKCDI---QNKVVQASAAREYAQMNGMI-FHEVSAKTAEGVQTAFEEIVRKALENTHTD 179
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ PQ + + E++ C
Sbjct: 180 EFVLPQSVINIEKKQEEKNKSCC 202
>gi|297709437|ref|XP_002831436.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9A [Pongo
abelii]
Length = 263
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 89/178 (50%), Positives = 123/178 (69%), Gaps = 3/178 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+S+MN+YV NK Q+ TIG +F+ K+L++D VT+QIWDT
Sbjct: 66 KSSLFKVILLGDGGVGKSSVMNRYVTNKXDTQFFHTIGVEFLNKDLEVDGHFVTMQIWDT 125
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 126 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 185
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
NKID S R V ++A WC G+ PYFETSAK+ N+ AF L E +
Sbjct: 186 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAFEEAVRRVLATEDR 240
>gi|186659519|ref|NP_001085504.2| RAB9A, member RAS oncogene family [Xenopus laevis]
gi|49117011|gb|AAH72859.1| Rab9a-b protein [Xenopus laevis]
Length = 201
Score = 184 bits (468), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 87/165 (52%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLK+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ KEL++D +VT+QIWDT
Sbjct: 4 KSSLLKIILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKELEVDGHMVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD + + P V+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLTNWKKEFIFYADVKDPDNFPLVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID + R V ++A WC GN PYFETSAK+ N+ AF
Sbjct: 124 NKIDM---TDRQVTVEEAQAWCRDNGNHPYFETSAKDATNVAAAF 165
>gi|61806526|ref|NP_001013496.1| uncharacterized protein LOC494576 [Danio rerio]
gi|60551617|gb|AAH91450.1| Si:dkey-13a21.4 [Danio rerio]
gi|182888850|gb|AAI64296.1| Si:dkey-13a21.4 protein [Danio rerio]
Length = 205
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 90/170 (52%), Positives = 120/170 (70%), Gaps = 4/170 (2%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I++G+SGVGK+S M ++V ++F+ Y+ATIG DF+TKE+ +D + V LQIWDTAG E
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQIWDTAGTE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF SLGS+ YRGA CC+LV+DV +FE+L W++EFL QA P + A PF++LGNKID
Sbjct: 69 RFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKID 128
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D R V KA +WC G YFE+SAKED +D+ F A AL+
Sbjct: 129 LD---HRQVSTSKAQKWCVDIG-AEYFESSAKEDIGVDKTFHSAARAALQ 174
>gi|348516818|ref|XP_003445934.1| PREDICTED: ras-related protein Rab-9B-like [Oreochromis niloticus]
Length = 202
Score = 184 bits (466), Expect = 2e-44, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV ++F Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEVDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + VN ++F++L +W++EF+ +D + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVNNLQSFQNLGSWKKEFMYYSDVKDPERFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V + +A WC G PYFETSAK+D N+ AF
Sbjct: 127 DME---QREVGEDEARAWCEENGCCPYFETSAKDDTNVTAAF 165
>gi|323332296|gb|EGA73706.1| Ypt7p [Saccharomyces cerevisiae AWRI796]
gi|323347113|gb|EGA81388.1| Ypt7p [Saccharomyces cerevisiae Lalvin QA23]
gi|392297158|gb|EIW08258.1| Ypt7p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 184
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/160 (56%), Positives = 117/160 (73%), Gaps = 2/160 (1%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWDTAGQERFQSLGSAFYRGADC 87
M++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+WDTAGQERFQSLG AFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 88 CVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKAL 147
CVLVYDV +FE++++WR+EFL A+ E PFV+LGNKID + S ++V +K A
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE-ESKKIVSEKSAQ 119
Query: 148 EWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
E G+IP F TSAK N+D AF +A AL+ D
Sbjct: 120 ELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQAD 159
>gi|154101355|gb|ABS58502.1| Rab7 [Leishmania donovani]
Length = 223
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 100/227 (44%), Positives = 139/227 (61%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV + F +YKATIGADF++K+++++ ++VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNHIFDNRYKATIGADFLSKDVEVNGRVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+D Q++F +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDATQQESFAHAGSWLEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRG--------------------NIPYFETSAKEDCN 168
NK D + R V K WCA + + YFETSAK++
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAEAANVNNGACAGAGDSAAPEMKYFETSAKDNAG 176
Query: 169 IDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQR-----GGCAC 210
++EAF+ V ++AL + P +E +S+ + C+C
Sbjct: 177 VEEAFIAVVQLALARKATVEEATPMPQTENLSQAQHEQAPSSSACSC 223
>gi|195392373|ref|XP_002054832.1| GJ24657 [Drosophila virilis]
gi|194152918|gb|EDW68352.1| GJ24657 [Drosophila virilis]
Length = 229
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 91/197 (46%), Positives = 128/197 (64%), Gaps = 28/197 (14%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI---- 65
+ LLK++VLGD GVGKTSLMN+YV F+ YKA+IG DF +KE+ ++++++T+ +
Sbjct: 6 KPLLKILVLGDCGVGKTSLMNRYVNKHFTNMYKASIGTDFFSKEVVVNNRMITMHVSLNF 65
Query: 66 --------------------WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQN 105
WDTAGQERFQ+LG AFYRG DCCVLVYDV K+F++L
Sbjct: 66 ASPIFVYVLLYCRGLSFIEFWDTAGQERFQTLGVAFYRGTDCCVLVYDVTSPKSFKNLNL 125
Query: 106 WREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKE 165
WR+EFL Q P + ++ PFV+LGNK D D + VP + AL WC N+P++E SAK
Sbjct: 126 WRDEFLIQTSPRDPDSFPFVVLGNKADLD---EQNVPTRVALHWCK-MNNMPFYEISAKN 181
Query: 166 DCNIDEAFLCVAEIALK 182
N+++AF +A++ L+
Sbjct: 182 GSNVEQAFEEIAKMGLE 198
>gi|403353512|gb|EJY76294.1| hypothetical protein OXYTRI_02199 [Oxytricha trifallax]
Length = 240
Score = 184 bits (466), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 85/168 (50%), Positives = 124/168 (73%), Gaps = 4/168 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R+ +K++++GDS VGKTS++ + + F+Q +K TIGADF TKE+ M+D ++V LQIWD
Sbjct: 11 RKCFIKLVIIGDSSVGKTSIIQMFQHKHFNQSFKPTIGADFSTKEITMEDNRIVNLQIWD 70
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLGSAFYRGADCC+LVYD+ ++F+ + NWR+ FL +++P + + PF++L
Sbjct: 71 TAGQERFQSLGSAFYRGADCCILVYDITNPQSFDHIMNWRQVFLIKSEPKDPQTLPFLIL 130
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRG--NIPYFETSAKEDCNIDEAF 173
GNK D + S R V +A +C G N+ ++ETSAK + N++EAF
Sbjct: 131 GNKCDVE-ESERRVTTIEAKRFCQQNGSNNMLFYETSAKNNINVEEAF 177
>gi|410896858|ref|XP_003961916.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 202
Score = 183 bits (465), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF TIG +F+ KEL++D VTLQIWDT
Sbjct: 4 KTSLQKVILLGDGGVGKSSLMNRYVTNKFDAHLFHTIGVEFLNKELEVDGHQVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLSNWKKEFIYYADVKEPEKFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D + R V ++A +WC G PYFETSAK+ N+ EAF
Sbjct: 124 NKLDV---TERQVTLEEAQQWCQENGGYPYFETSAKDATNVAEAF 165
>gi|157867883|ref|XP_001682495.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
gi|6983543|emb|CAB75350.1| LmRab7 GTP-binding protein [Leishmania major]
gi|68125949|emb|CAJ03806.1| putative rab7 GTP binding protein [Leishmania major strain
Friedlin]
Length = 223
Score = 183 bits (465), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/227 (45%), Positives = 143/227 (62%), Gaps = 32/227 (14%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV F +YKATIGADF++K+++++ +VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNRIFDNRYKATIGADFLSKDVEVNGCVVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD C+LV+DV Q++F + +W EEF QA G ++ VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACILVFDVTQQESFAHVGSWLEEFSIQA--GRRDS---VLVG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRG--------------------NIPYFETSAKEDCN 168
NK D + R V K WCA + + YFETSAK++
Sbjct: 119 NKTDLE--DRRQVASKTVQAWCAKQNAEAANAINGACAGAGDSAAPEMKYFETSAKDNAG 176
Query: 169 IDEAFLCVAEIAL--KNEHKDIYYQPQGISETVSEVEQ---RGGCAC 210
++EAF+ V ++AL K ++ PQ ++ + ++ EQ C+C
Sbjct: 177 VEEAFIAVVQLALARKATVEEATPMPQTVNLSQAQHEQTPTSSACSC 223
>gi|326918884|ref|XP_003205715.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-9B-like
[Meleagris gallopavo]
Length = 201
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 118/162 (72%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + F +GADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNKI
Sbjct: 67 ERFKSLRTPFLQGADCCLLTFSVDDRQSFENLSNWQKEFVYYADVKDPERFPFVVLGNKI 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DK---LERQVSTEEAQAWCMENGNYPYLETSAKDDTNVAVAF 165
>gi|219127632|ref|XP_002184036.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217404759|gb|EEC44705.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 237
Score = 183 bits (464), Expect = 4e-44, Method: Compositional matrix adjust.
Identities = 103/205 (50%), Positives = 130/205 (63%), Gaps = 23/205 (11%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-----KLVTL 63
R LK+++LGDSGVGKTSLMN+Y KF+ QYKATIGADF+TK++ + D +V L
Sbjct: 5 RPKTLKIVILGDSGVGKTSLMNRYSTGKFTGQYKATIGADFLTKQVVVTDAFGQRHVVML 64
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQAD-----PGE 118
QIWDTAGQERFQSLG FYRGAD +L YDV + ++L +WR+EFL Q PG
Sbjct: 65 QIWDTAGQERFQSLGVGFYRGADAALLCYDVTDLHSIDNLNHWRQEFLDQVGGSMMVPGL 124
Query: 119 HEAC---PFVLLGNKIDTDGGSSRVVPQKKALEWC------AYRGNIPY--FETSAKEDC 167
E PF +LGNK+D + R+VP +A +WC G+IP+ FETSAK
Sbjct: 125 SETAAQFPFAVLGNKVDK--VNDRLVPLARAEQWCRDAAGAHSMGSIPFPHFETSAKTAV 182
Query: 168 NIDEAFLCVAEIALKNEHKDIYYQP 192
N+DEAF VA +AL+ E QP
Sbjct: 183 NVDEAFHEVARLALQYEDYKRRSQP 207
>gi|317418970|emb|CBN81008.1| Ras-related protein Rab-7a [Dicentrarchus labrax]
Length = 204
Score = 182 bits (463), Expect = 6e-44, Method: Compositional matrix adjust.
Identities = 92/199 (46%), Positives = 127/199 (63%), Gaps = 5/199 (2%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I++G SGVGK+S MN+YV ++F+ Y+AT+G DF++K + ++ VTLQIWDTAG E
Sbjct: 10 LKIILIGSSGVGKSSFMNRYVNHRFTNMYRATVGTDFLSKTVTIEGDTVTLQIWDTAGTE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RFQSLG YRGA CC+LV+DV + +F +L+ WR+EFL Q +P + PF++LGNK D
Sbjct: 70 RFQSLGMPLYRGAHCCMLVFDVTSRASFSALEGWRKEFLIQGEPEDPSDFPFIVLGNKTD 129
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
S R V ++AL+WC G YFE SAKED ++++ FL A+ LK K
Sbjct: 130 L---SDREVSGRQALQWCEEIG-AEYFEGSAKEDLDVEKPFLRAAQSGLKQYKKHTLENT 185
Query: 193 QGISETVSEV-EQRGGCAC 210
T + E R C C
Sbjct: 186 GHFQITCKQPRETRNTCEC 204
>gi|348541313|ref|XP_003458131.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 203
Score = 182 bits (462), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 87/167 (52%), Positives = 118/167 (70%), Gaps = 3/167 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M + LLKVI+LGD GVGK+SLMN+YV NKF TIG +F+ KEL++D + VTLQIW
Sbjct: 2 MSKSTLLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIW 61
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+SL + FYRG+DCC+L + ++ ++F++L NW++EF AD + ++ PFV+
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFQNLANWKKEFTYYADIKDPDSFPFVV 121
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
LGNK+D R V + A +WC G PYFETSAK+ N+ AF
Sbjct: 122 LGNKLDI---PERQVSGEDARKWCRENGGHPYFETSAKDATNVASAF 165
>gi|348510295|ref|XP_003442681.1| PREDICTED: ras-related protein Rab-7a-like [Oreochromis niloticus]
Length = 204
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 94/200 (47%), Positives = 128/200 (64%), Gaps = 7/200 (3%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LKVI++G+SGVGK+S+MN+YV ++F+ Y+AT+G DF++K + +D VTLQIWDTAG E
Sbjct: 10 LKVILIGNSGVGKSSVMNRYVNHRFTNMYRATVGTDFLSKTINIDGDTVTLQIWDTAGTE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RFQSLG+ YRGA CC+LV+DV + +F +L WR+EFL Q +P + PF++LGNK D
Sbjct: 70 RFQSLGTPLYRGAHCCMLVFDVTSKASFSALDGWRKEFLIQGEPKDPSDFPFIVLGNKTD 129
Query: 133 TDGGSSRVVPQKKALEWC-AYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
S R V K A +WC RG YFE SAKED ++++ FL A+ L+ K
Sbjct: 130 L---SDREVSDKLARQWCEEIRGE--YFEGSAKEDLDVEKPFLRAAQRGLQQYKKHTLEN 184
Query: 192 PQGISETVSEV-EQRGGCAC 210
T + E R C C
Sbjct: 185 TGHFQITCKQPRETRNTCEC 204
>gi|327264293|ref|XP_003216948.1| PREDICTED: ras-related protein Rab-7a-like isoform 1 [Anolis
carolinensis]
Length = 199
Score = 182 bits (462), Expect = 8e-44, Method: Compositional matrix adjust.
Identities = 90/205 (43%), Positives = 132/205 (64%), Gaps = 7/205 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M RR+ LK++++G+SG GK++LMNQYV N+FS +Y+ATIG+DF++K++ +D +++T+QIW
Sbjct: 1 MFRRSHLKILLIGNSGAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHIDGRMLTVQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG ERFQ+LG+A YRG+DCC+LV+DV +F++L W ++ L Q + E A P +
Sbjct: 61 DTAGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQIE--EQSAFPIAV 118
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNK D + +R V ++A W + YFETSAK N+ E F ALKN
Sbjct: 119 IGNKTDLE---NREVSLEEAELWSRLH-HATYFETSAKAATNVQEVFQWAVRAALKNRRI 174
Query: 187 DIYYQPQGIS-ETVSEVEQRGGCAC 210
+P + ET E R C C
Sbjct: 175 SELPEPDSVRLETRPEGAHRDKCGC 199
>gi|449015834|dbj|BAM79236.1| small GTP-binding protein of Rab family [Cyanidioschyzon merolae
strain 10D]
Length = 249
Score = 182 bits (461), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 100/231 (43%), Positives = 131/231 (56%), Gaps = 43/231 (18%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD------------- 58
LLK+++LGDSGVGKTS + ++V +FS QYKATIGADF+TKEL++ D
Sbjct: 7 LLKLVILGDSGVGKTSCLERFVNRRFSLQYKATIGADFLTKELELFDDSPCDEGVTAPKE 66
Query: 59 -------------------------KLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYD 93
+ V LQIWDTAGQER+QSLG+AFYRGAD C L++D
Sbjct: 67 KTGTSEPGGAGVATCEFSTEACGRRRQVCLQIWDTAGQERYQSLGAAFYRGADGCALMFD 126
Query: 94 VNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRV--VPQKKALEWCA 151
+ + S+ +WREEFL A P PFVLLGNK+D + V ++ AL WCA
Sbjct: 127 FSEASSLASVTSWREEFLLLAAPPAASTFPFVLLGNKVDLVRSQTSVYEATREHALSWCA 186
Query: 152 YRGNIPYFETSAKEDCNIDEAFLCVAEIAL---KNEHKDIYYQPQGISETV 199
IP+FETSA E+ ID A +A AL + HK Y+P I +++
Sbjct: 187 AHHAIPFFETSALENTGIDRAMTTLARTALLYHEQVHKAAGYEPDAILDSL 237
>gi|33468618|emb|CAE30413.1| novel protein similar to human and rodent member RAS oncogene
family RAB7 (RAB7) [Danio rerio]
Length = 176
Score = 181 bits (460), Expect = 1e-43, Method: Compositional matrix adjust.
Identities = 91/171 (53%), Positives = 121/171 (70%), Gaps = 5/171 (2%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ-IWDTAGQ 71
LK+I++G+SGVGK+S M ++V ++F+ Y+ATIG DF+TKE+ +D + V LQ IWDTAG
Sbjct: 9 LKLILIGNSGVGKSSFMTRFVDHRFTNLYRATIGVDFLTKEITVDRRPVILQQIWDTAGT 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF SLGS+ YRGA CC+LV+DV +FE+L W++EFL QA P + A PF++LGNKI
Sbjct: 69 ERFHSLGSSLYRGAHCCLLVFDVTSSVSFEALDVWKKEFLVQACPSDPAAFPFIVLGNKI 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D R V KA +WC G YFE+SAKED +D+ F VA AL+
Sbjct: 129 DLD---HRQVSTSKAQKWCVDIGA-EYFESSAKEDIGVDKTFHSVARAALQ 175
>gi|432850525|ref|XP_004066796.1| PREDICTED: ras-related protein Rab-9A-like [Oryzias latipes]
Length = 200
Score = 181 bits (459), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 88/181 (48%), Positives = 122/181 (67%), Gaps = 3/181 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M + LLKVI+LGD GVGK+SLMN+YV NKF TIG +F+ KEL++D + VTLQIW
Sbjct: 1 MAKSALLKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGRRVTLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+SL + FYRG+DCC+L + ++ ++F +L NW++EF AD + + PF++
Sbjct: 61 DTAGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFSNLANWKKEFSFYADVKDADHFPFLV 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK+D R V + A +WC G +PYFETSAK+ N+ AF L ++ +
Sbjct: 121 LGNKLDV---PQRQVSGEDARQWCRENGGLPYFETSAKDATNVASAFEEAVRRVLASDDR 177
Query: 187 D 187
D
Sbjct: 178 D 178
>gi|432878834|ref|XP_004073408.1| PREDICTED: ras-related protein Rab-9B-like [Oryzias latipes]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 87/173 (50%), Positives = 119/173 (68%), Gaps = 3/173 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV ++F Q TIG +F+ +++ +D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDMVVDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + VN ++F++L W+ EF+ +D + E FV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVNDSRSFQNLNCWKREFINYSDVKDPERFSFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D + R V + +A WC G+ PYFETSAK+D N+ AF L E
Sbjct: 127 DVE---HREVGEVEARAWCEENGSYPYFETSAKDDTNVAAAFEAAVREVLATE 176
>gi|348536070|ref|XP_003455520.1| PREDICTED: ras-related protein Rab-9A-like [Oreochromis niloticus]
Length = 202
Score = 181 bits (458), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 119/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +LLKVI+LGD GVGK+S+MN+YV NKF TIG +F+ K+L++D VTLQIWDT
Sbjct: 4 KTSLLKVILLGDGGVGKSSIMNRYVTNKFDAHLFHTIGVEFLNKDLEVDGHQVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L NW++EF+ AD E E PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDNQSFLNLGNWKKEFIYYADVKEPEKFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK+D + R V ++A +WC G+ PY+ETSAK+ N+ AF
Sbjct: 124 NKVDV---TERQVSTEEAQQWCKENGDYPYYETSAKDAINVAVAF 165
>gi|189239801|ref|XP_970534.2| PREDICTED: similar to ras-related protein Rab-7 [Tribolium
castaneum]
Length = 197
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 99/208 (47%), Positives = 130/208 (62%), Gaps = 19/208 (9%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDS VGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+ +
Sbjct: 4 RKKVLLKVIILGDSSVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVTVDDRTSLYTVCS 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
+ Q + + V V+DV TF+SL +WR+EFL QA P E E PFVLL
Sbjct: 64 ISWQRQMLTF-----------VSVFDVTAPNTFKSLDSWRDEFLIQASPREPENFPFVLL 112
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL--KNEH 185
GNK+D + R + K+A +WC + NIPYFETSAKE N+++AFL +A+ AL +N
Sbjct: 113 GNKVDLE---PRAISSKRAQQWCQMKNNIPYFETSAKEGLNVEQAFLAIAKNALAQQNST 169
Query: 186 KDIYYQ-PQGISETVSEVEQRGG--CAC 210
D+Y + P I T + G CAC
Sbjct: 170 VDLYNEFPDQIKLTNTNKPNSNGDSCAC 197
>gi|403374318|gb|EJY87103.1| Ras-related protein Rab-7 [Oxytricha trifallax]
Length = 237
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 94/193 (48%), Positives = 126/193 (65%), Gaps = 7/193 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++N LK+++LGDSGVGKT+L+ Q++ K K TIGADF KE+Q+D VTLQIWD
Sbjct: 3 KKKNFLKIVILGDSGVGKTTLLQQFLNGKIVGNAKPTIGADFSKKEIQIDGVSVTLQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQE+FQSLG AFYRGADCC L YD+ +FE++ WRE F++ A P + PF++L
Sbjct: 63 TAGQEKFQSLGYAFYRGADCCCLCYDITNPNSFENMNKWREGFIENAGPEDVNNFPFMIL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAY--RGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNKID + R + ++A EWC N ++ETSAKE +++ AF +A+ L E
Sbjct: 123 GNKIDKE--YDRKIDTREAQEWCENVCGKNSLFYETSAKEGLSVEMAFAELAKKGLIREQ 180
Query: 186 KDIYYQ---PQGI 195
K I PQ I
Sbjct: 181 KFILSSNLLPQSI 193
>gi|47222954|emb|CAF99110.1| unnamed protein product [Tetraodon nigroviridis]
Length = 202
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/162 (54%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV + F Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + VN ++F++L W++EF+ +D E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKNAERFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V Q +A WC G PYFETSAK+D N+ AF
Sbjct: 127 DME---QREVGQDEARAWCEENGCCPYFETSAKDDTNVTAAF 165
>gi|291236009|ref|XP_002737937.1| PREDICTED: RAB9, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 205
Score = 180 bits (457), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 91/205 (44%), Positives = 131/205 (63%), Gaps = 6/205 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ LLKV++LGD GVGK+SLMN+++ NKF Q TIG +F+ K++ +D TLQIWDT
Sbjct: 4 KTQLLKVVILGDGGVGKSSLMNRFISNKFDSQSFHTIGVEFLNKDIVIDGHSYTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F +L W++EFL AD + ++ PFV+LG
Sbjct: 64 AGQERFKSLRTPFYRGSDCCLLTFGVDDVQSFHNLNMWKKEFLYYADVKDGDSFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D +V + L WC G PY+ETSAK+ N+DEAF ++ LK E +
Sbjct: 124 NKVDVPPEERQVTADEAKL-WCEANGRSPYYETSAKDAINVDEAFTAAVKLLLKMEER-- 180
Query: 189 YYQPQGISETVSEVEQRG---GCAC 210
G ++TV+ + R C C
Sbjct: 181 VEMRSGYTDTVNLHKNRSRKDHCQC 205
>gi|125834658|ref|XP_001339262.1| PREDICTED: ras-related protein Rab-9B-like [Danio rerio]
Length = 202
Score = 180 bits (456), Expect = 3e-43, Method: Compositional matrix adjust.
Identities = 88/173 (50%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV ++F Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDRFDSQSFHTIGVEFLNRDLEIDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ ++F++L W++EF+ +D + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVDDLQSFQNLGCWKKEFMYYSDVRDPERFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D + R V + +A WC G PYFETSAK+D N+ AF L +E
Sbjct: 127 DKE---EREVGEDEARAWCEENGCCPYFETSAKDDTNVGAAFEAAVREVLASE 176
>gi|406698207|gb|EKD01448.1| RAB small monomeric GTPase [Trichosporon asahii var. asahii CBS
8904]
Length = 654
Score = 179 bits (455), Expect = 5e-43, Method: Compositional matrix adjust.
Identities = 91/162 (56%), Positives = 109/162 (67%), Gaps = 32/162 (19%)
Query: 23 VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFY 82
VGKTSLMNQYV +FS QYKATIGADF+T+EL +DD++VT+Q+WDTAGQERFQSLG AFY
Sbjct: 47 VGKTSLMNQYVNKRFSNQYKATIGADFLTRELVVDDRVVTMQLWDTAGQERFQSLGVAFY 106
Query: 83 RGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVP 142
RGADCCVLVYDVN K+FE+L WR+EFL Q V + K
Sbjct: 107 RGADCCVLVYDVNSSKSFEALDGWRDEFLVQ-----------VGIAGKA----------- 144
Query: 143 QKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+GNIPYFETSAKE N+++AF +A+ AL E
Sbjct: 145 ----------KGNIPYFETSAKEAINVEQAFQTIAKNALAQE 176
>gi|405978301|gb|EKC42702.1| Ras-related protein Rab-9A [Crassostrea gigas]
Length = 205
Score = 179 bits (454), Expect = 6e-43, Method: Compositional matrix adjust.
Identities = 86/166 (51%), Positives = 119/166 (71%), Gaps = 3/166 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK+SLMN++V NKF Q TIG +F+ K++ + + T+QIWD
Sbjct: 3 QKSKLLKVVLLGDGGVGKSSLMNRFVSNKFDAQSFHTIGVEFLNKDVTYEGENYTMQIWD 62
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF+SL + FYRGADCC+L + V+ ++F++L W++EFL AD + PFV+L
Sbjct: 63 TAGQERFKSLRTPFYRGADCCLLTFAVDDIQSFKNLAMWKKEFLYYADIQDGNNFPFVIL 122
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
GNKID + +R+V + A EWC G PYFETSAK+ N+DEAF
Sbjct: 123 GNKIDME---NRMVSTEMAQEWCQANGQAPYFETSAKDSTNVDEAF 165
>gi|71745492|ref|XP_827376.1| small GTPase [Trypanosoma brucei brucei strain 927/4 GUTat10.1]
gi|70831541|gb|EAN77046.1| small GTPase, putative [Trypanosoma brucei brucei strain 927/4
GUTat10.1]
gi|74834804|emb|CAJ30027.1| rab7 homologue [Trypanosoma brucei brucei]
gi|261331581|emb|CBH14575.1| GTP-binding protein, putative [Trypanosoma brucei gambiense DAL972]
Length = 220
Score = 179 bits (453), Expect = 7e-43, Method: Compositional matrix adjust.
Identities = 96/187 (51%), Positives = 122/187 (65%), Gaps = 26/187 (13%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R LLK+I+LGDSGVGKT+L++QYV F +YKATIGADF+T+++++D KLVTLQIWDTA
Sbjct: 5 RQLLKIIILGDSGVGKTALVHQYVNKNFDNRYKATIGADFLTRDVEIDGKLVTLQIWDTA 64
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLGSAFYRGAD CVLV+D+ ++F + +W EEF QA G+ E VL+GN
Sbjct: 65 GQERFQSLGSAFYRGADACVLVFDLTDSESFSHINSWLEEFRAQA--GQREC---VLIGN 119
Query: 130 KIDTDGGSSRVVPQKKALEWC-------------------AYRGNIPYFETSAKEDCNID 170
K D R V + A WC G+I YFE SAK + ++
Sbjct: 120 KSDLT--ERRQVTSRTAEAWCESLKNGEGGDASLGAAAGEETMGSIQYFEASAKANVGVE 177
Query: 171 EAFLCVA 177
EAFL V+
Sbjct: 178 EAFLTVS 184
>gi|440795724|gb|ELR16841.1| GTPbinding protein YPTC5, putative [Acanthamoeba castellanii str.
Neff]
Length = 197
Score = 178 bits (452), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 92/167 (55%), Positives = 122/167 (73%), Gaps = 3/167 (1%)
Query: 18 LGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSL 77
+GDSGVGKTSLM+QYV +F+ YKATIGADF+ K++ +DD++VTLQIWDTAGQERF SL
Sbjct: 18 IGDSGVGKTSLMHQYVNKQFAYSYKATIGADFLMKDVVVDDQVVTLQIWDTAGQERFFSL 77
Query: 78 GSAFYRGADCCVLVYDVNVQKTFESLQNWREEFL-KQADPGEHEACPFVLLGNKIDTDGG 136
G+ FYRG D CVLVYDV K+FE+L NWR+E L K P + PFV++GNKID
Sbjct: 78 GAGFYRGVDGCVLVYDVTNPKSFENLTNWRKELLHKIGGPKLDKLPPFVVIGNKIDL--A 135
Query: 137 SSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
R+VP+ A+ WC G++ ++E SAK+ N+++AF + + AL N
Sbjct: 136 EQRLVPEAMAIAWCQAHGSVTHYEGSAKDAINVEQAFKALVKEALAN 182
>gi|221105634|ref|XP_002161676.1| PREDICTED: ras-related protein Rab-9B-like [Hydra magnipapillata]
Length = 209
Score = 178 bits (451), Expect = 1e-42, Method: Compositional matrix adjust.
Identities = 89/198 (44%), Positives = 132/198 (66%), Gaps = 3/198 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ N LKVI+LGD VGK++LMN++V NKF Q TIG +F+ KE+++ TLQIWDT
Sbjct: 4 KPNFLKVIILGDGAVGKSALMNRFVNNKFDSQSFHTIGVEFLNKEVKVSGDTYTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+D C+LVY V+ +++F +L W+ EFL AD + ++ PFV+LG
Sbjct: 64 AGQERFKSLRTPFYRGSDICLLVYAVDDEQSFYNLDMWKREFLYYADVSDPDSFPFVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D + + V ++A WC +GN+ FETSAK N+D+AF+ E +++EHK
Sbjct: 124 NKLDLE---NHEVTLERAQTWCQAKGNMICFETSAKNSINVDQAFVASVERWIQHEHKLD 180
Query: 189 YYQPQGISETVSEVEQRG 206
G + T ++++ G
Sbjct: 181 KTLKTGTNYTNVDLKKHG 198
>gi|410914068|ref|XP_003970510.1| PREDICTED: ras-related protein Rab-9B-like [Takifugu rubripes]
Length = 202
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 87/162 (53%), Positives = 117/162 (72%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV + F Q TIG +F+ ++L++D +LVTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTDCFDSQSFHTIGVEFLNRDLEVDGRLVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + VN ++F++L W++EF+ +D E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFAVNDLQSFQNLGCWKKEFMYYSDVKVPERFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V + +A WC G PYFETSAK+D N+ AF
Sbjct: 127 DME---QREVGEDEARAWCEENGCCPYFETSAKDDTNVTAAF 165
>gi|328865692|gb|EGG14078.1| Rab GTPase [Dictyostelium fasciculatum]
Length = 466
Score = 178 bits (451), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 136/204 (66%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR +LK++++G+ VGKTS++ +YV +F K TIG DFV K++ + D+LVTLQ+WD
Sbjct: 264 QRRKVLKIVIIGEKSVGKTSILKRYVDQRFVP-MKPTIGIDFVNKDVMVHDRLVTLQLWD 322
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T+GQERF+SL ++YRGADCCVLV+DV +K+ + L WR +F+++ + PFV+L
Sbjct: 323 TSGQERFRSLDISYYRGADCCVLVFDVTNEKSLQDLIIWRNDFIEKIGVQNQDTFPFVVL 382
Query: 128 GNKIDTDGGSSRVVPQKKALEWCA-YRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNK+D + SRVV +K+AL + GNI YF+TSAK + N++EAF V+ I+L++
Sbjct: 383 GNKVDEE---SRVVSEKQALNFVKQLGGNIFYFDTSAKSNINVEEAFSTVSRISLQSLEP 439
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
D + + E +S + C
Sbjct: 440 DAFDEATRKPEKLSLETPKKDSPC 463
>gi|410906169|ref|XP_003966564.1| PREDICTED: ras-related protein Rab-9A-like [Takifugu rubripes]
Length = 201
Score = 177 bits (450), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/167 (51%), Positives = 115/167 (68%), Gaps = 3/167 (1%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M + L+KVI+LGD GVGK+SLMN+YV NKF TIG +F+ KEL++D + VTLQIW
Sbjct: 2 MSKSALVKVILLGDGGVGKSSLMNRYVTNKFDSHLFHTIGVEFLNKELEVDGQQVTLQIW 61
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+SL + FYRG+DCC+L + ++ ++F +L NW++EF AD + + PFVL
Sbjct: 62 DTAGQERFRSLRTPFYRGSDCCLLTFSLDDGQSFRNLANWKKEFTYYADIKDPDNFPFVL 121
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
LGNK+D R V + +WC G PYFETSAK+ N+ AF
Sbjct: 122 LGNKVDV---PERQVTGEDVQKWCRENGGCPYFETSAKDATNVASAF 165
>gi|344256888|gb|EGW12992.1| Ras-related protein Rab-9B [Cricetulus griseus]
Length = 197
Score = 177 bits (449), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 86/162 (53%), Positives = 115/162 (70%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+L +
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLDKE- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 126 ------ERQVTTQEAEAWCMENGNYPYLETSAKDDTNVTVAF 161
>gi|340056350|emb|CCC50681.1| putative rab7 GTP binding protein [Trypanosoma vivax Y486]
Length = 211
Score = 177 bits (448), Expect = 3e-42, Method: Compositional matrix adjust.
Identities = 94/168 (55%), Positives = 115/168 (68%), Gaps = 17/168 (10%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LLK+I+LGDSGVGKTSLM+QYV KF +YKATIGADF+TKEL++D K VTLQIWDT
Sbjct: 4 KRQLLKIIILGDSGVGKTSLMHQYVNKKFDNRYKATIGADFMTKELEVDGKSVTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLGSAFYRGAD CVLV+D+ Q++F + +W EEF QA C VL+G
Sbjct: 64 AGQERFQSLGSAFYRGADACVLVFDITQQESFSHVNSWLEEFRVQAGK-----CNCVLIG 118
Query: 129 NKIDTDGGSSRVVPQKKALEWCAY----------RGNIPYFETSAKED 166
NK +D R V + A WC ++ YFE SAK++
Sbjct: 119 NK--SDLADRRQVSSRSAELWCESLKSDEEGGEQADSMQYFEASAKDN 164
>gi|320166438|gb|EFW43337.1| Rab9a protein [Capsaspora owczarzaki ATCC 30864]
Length = 211
Score = 176 bits (446), Expect = 5e-42, Method: Compositional matrix adjust.
Identities = 85/173 (49%), Positives = 122/173 (70%), Gaps = 3/173 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD GVGK+SLMN++V N+F Q TIG +F+ K + ++++ TLQIWDTAGQ
Sbjct: 18 LLKVVILGDGGVGKSSLMNRFVNNEFDAQSFHTIGVEFLNKVVALNNESYTLQIWDTAGQ 77
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+LV+ ++ +++F +L W++EFL AD + E PFV++GNKI
Sbjct: 78 ERFKSLRTPFYRGADCCLLVFGIDDEQSFRNLTMWKKEFLYYADVADPEHFPFVVVGNKI 137
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D +R V + A WC G + YFETSAKE +++AFL A+ K++
Sbjct: 138 DV---RARQVRSEDAEAWCKANGGLAYFETSAKEAIKVEQAFLAAAQQVPKSD 187
>gi|123501229|ref|XP_001328023.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736248|gb|AAX97453.1| small Rab GTPase Rab7a [Trichomonas vaginalis]
gi|121910961|gb|EAY15800.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 203
Score = 176 bits (446), Expect = 6e-42, Method: Compositional matrix adjust.
Identities = 90/200 (45%), Positives = 123/200 (61%), Gaps = 4/200 (2%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTA 69
R +LK+++LGD+ VGKTSL+NQ+V +F+ YKATIG+DF +K+L +D VTLQIWDTA
Sbjct: 6 RQMLKLLLLGDASVGKTSLLNQFVNREFTSSYKATIGSDFSSKQLDVDGHYVTLQIWDTA 65
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGN 129
GQERFQSLG FYRG DCC+LVYDV +FE+++ WR EF Q PF+LLGN
Sbjct: 66 GQERFQSLGPTFYRGTDCCILVYDVTKPASFENIKKWRNEFSLQLGLSNASDFPFLLLGN 125
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
K D + V A E+ G++ + E SAK + AF + AL+ +
Sbjct: 126 KSDL---PDKAVQPSAAREFAQMNGDMIFEEVSAKTAEGVQTAFEAIVRKALEKAPAQDF 182
Query: 190 YQPQGISETVSE-VEQRGGC 208
PQ + ++ E++GGC
Sbjct: 183 VLPQSVVNIENKPAEKQGGC 202
>gi|327264295|ref|XP_003216949.1| PREDICTED: ras-related protein Rab-7a-like isoform 2 [Anolis
carolinensis]
Length = 259
Score = 174 bits (442), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 90/214 (42%), Positives = 132/214 (61%), Gaps = 16/214 (7%)
Query: 7 MKRRNLLKVIVLGDSG---------VGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD 57
M RR+ LK++++G+SG GK++LMNQYV N+FS +Y+ATIG+DF++K++ +D
Sbjct: 52 MFRRSHLKILLIGNSGSRPESFGIQAGKSALMNQYVNNRFSSRYRATIGSDFLSKQVHID 111
Query: 58 DKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPG 117
+++T+QIWDTAG ERFQ+LG+A YRG+DCC+LV+DV +F++L W ++ L Q +
Sbjct: 112 GRMLTVQIWDTAGTERFQALGTALYRGSDCCLLVFDVTSASSFQALDKWHKQLLLQIE-- 169
Query: 118 EHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
E A P ++GNK D + +R V ++A W + YFETSAK N+ E F
Sbjct: 170 EQSAFPIAVIGNKTDLE---NREVSLEEAELWSRLH-HATYFETSAKAATNVQEVFQWAV 225
Query: 178 EIALKNEHKDIYYQPQGIS-ETVSEVEQRGGCAC 210
ALKN +P + ET E R C C
Sbjct: 226 RAALKNRRISELPEPDSVRLETRPEGAHRDKCGC 259
>gi|242020304|ref|XP_002430595.1| rab9 and, putative [Pediculus humanus corporis]
gi|212515767|gb|EEB17857.1| rab9 and, putative [Pediculus humanus corporis]
Length = 210
Score = 174 bits (441), Expect = 2e-41, Method: Compositional matrix adjust.
Identities = 80/175 (45%), Positives = 117/175 (66%), Gaps = 1/175 (0%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LKV++LGD VGK+ LM +YV N+F + TIG +F+ KE+ +DDK LQIWDTAGQ
Sbjct: 7 ILKVVILGDGAVGKSCLMQRYVNNRFDENSFHTIGVEFLNKEIDLDDKTFILQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRG+D C+LV+ + +++FE+++ W+ EF+ AD + PFV++GNK+
Sbjct: 67 ERFKSLRTPFYRGSDLCLLVFSFDDRESFENIEKWKNEFVHYADIKDPANFPFVIIGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
D R + ++A+ WC GN+PY ETSAKE N++ AF+ I E K
Sbjct: 127 DL-VDEQRQISTEEAVSWCKNNGNLPYLETSAKESTNVENAFVTAVNIWSSLEEK 180
>gi|213406938|ref|XP_002174240.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
gi|212002287|gb|EEB07947.1| GTP-binding protein ypt71 [Schizosaccharomyces japonicus yFS275]
Length = 176
Score = 174 bits (440), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 93/204 (45%), Positives = 121/204 (59%), Gaps = 34/204 (16%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
RR LLKV++LGDSGV ++D + +TLQ+WDT
Sbjct: 5 RRTLLKVVILGDSGV-------------------------------EVDGEAITLQLWDT 33
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERFQSLG AFYRGADCC++VYDVN K+FES++NWR EFL+Q + A PFV+LG
Sbjct: 34 AGQERFQSLGVAFYRGADCCIVVYDVNNAKSFESVENWRSEFLEQTSSLNNNAFPFVILG 93
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYR-GNIPYFETSAKEDCNIDEAFLCVAEIALKN-EHK 186
N+ID D S R VP AL +C + GN+ +FETSAK+ N+ AF +A AL+N H+
Sbjct: 94 NQIDKD-PSKRTVPLNHALSYCKNQGGNLTHFETSAKDGTNVSIAFESIARSALENSSHE 152
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
D G ++ + G CAC
Sbjct: 153 DYASDLTGSISLLNNTNESGSCAC 176
>gi|403354847|gb|EJY76983.1| hypothetical protein OXYTRI_01389 [Oxytricha trifallax]
Length = 785
Score = 173 bits (439), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/170 (49%), Positives = 120/170 (70%), Gaps = 2/170 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+KV+ +GDSGVGKTSL+ + KF++ +K TIGADF KE+Q++ ++VTLQIWDTAGQ
Sbjct: 572 FIKVVAIGDSGVGKTSLIQMFENTKFTENFKPTIGADFSNKEIQVNGRIVTLQIWDTAGQ 631
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+QSLG+AFYRGADCC LVYDV ++FE++ NW+ FL ++ E+ PF+++GNKI
Sbjct: 632 ERYQSLGTAFYRGADCCFLVYDVTNLQSFENVVNWKNSFLGKSMVVSPESFPFMVVGNKI 691
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
D + S R V + C G + + E SA+ + N++ AF+ +AE AL
Sbjct: 692 DLE--SDRQVSFDQGQRVCNENGEMLFSEASARTNTNVEAAFVKLAEQAL 739
>gi|384486148|gb|EIE78328.1| hypothetical protein RO3G_03032 [Rhizopus delemar RA 99-880]
Length = 704
Score = 173 bits (438), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 84/154 (54%), Positives = 107/154 (69%), Gaps = 3/154 (1%)
Query: 59 KLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGE 118
K +T+QIWDTAGQERFQSLG AFYRGADCCVLVYDVN +++SL+ W +EFL QA P +
Sbjct: 552 KAITMQIWDTAGQERFQSLGVAFYRGADCCVLVYDVNNTASYQSLEGWHDEFLLQASPRD 611
Query: 119 HEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
+ PFV+LGNK+D D S R +PQK+ L +C +GNIP+FETSAKE NI+EAF +A+
Sbjct: 612 PDRFPFVILGNKVDVD-KSKRTIPQKRTLAFCQAKGNIPHFETSAKEGTNIEEAFQLIAK 670
Query: 179 IALKNEHKDIYYQPQGISETVSEVEQR--GGCAC 210
AL+ E Y Q + E++ CAC
Sbjct: 671 SALQQESSIELYDEQSDPIRLDELDNSDVNKCAC 704
>gi|432859507|ref|XP_004069141.1| PREDICTED: ras-related protein Rab-7a-like [Oryzias latipes]
Length = 204
Score = 172 bits (437), Expect = 5e-41, Method: Compositional matrix adjust.
Identities = 84/174 (48%), Positives = 118/174 (67%), Gaps = 4/174 (2%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I++G+SGVGK+S MN+YV ++F+ Y+AT+G DF +K+ +D + V LQIWDTAG E
Sbjct: 10 LKIILIGNSGVGKSSFMNRYVNHRFTNAYRATVGTDFFSKKTVLDGEPVILQIWDTAGTE 69
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RFQSLG+ YRG+ CC+LV+DV +F +L WR+EFL Q +P + PF++LGNK D
Sbjct: 70 RFQSLGTPLYRGSHCCLLVFDVTSSASFGALDAWRKEFLVQGEPLDPSDFPFIVLGNKTD 129
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
S R V +KA +WC G YFE SAK D +++ F A++AL+ K
Sbjct: 130 L---SDREVSSRKAQQWCEEVG-AEYFEGSAKADVDVEPPFNRAAKLALQQYKK 179
>gi|321478913|gb|EFX89869.1| hypothetical protein DAPPUDRAFT_299986 [Daphnia pulex]
Length = 216
Score = 172 bits (436), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/167 (47%), Positives = 117/167 (70%), Gaps = 1/167 (0%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
++ R++LKV++LGD GVGKT +M +++ ++F TIG +F+ K+ + K TLQIW
Sbjct: 9 VETRSVLKVLILGDGGVGKTCIMGRFINDQFEDNSFHTIGVEFLNKDFALTGKNYTLQIW 68
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+SL + FYRG D C+LV+ ++ + +F +L WR+EFL AD + + PF++
Sbjct: 69 DTAGQERFKSLRTPFYRGTDICLLVFSLDDKSSFSNLSLWRQEFLHYADIQDPQDYPFII 128
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+GNK+D G +SR V ++ +WC+Y GN PY+ETSAK D NI E F
Sbjct: 129 VGNKVDL-GAASRTVHAEEIKQWCSYHGNPPYYETSAKTDVNIGEVF 174
>gi|326437216|gb|EGD82786.1| small GTP binding protein Rab9 [Salpingoeca sp. ATCC 50818]
Length = 201
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 80/172 (46%), Positives = 117/172 (68%), Gaps = 2/172 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
++KVI+LGD VGK+SLM Q+V N+F+ + TIG + + K++++ + +T+QIWDTAGQ
Sbjct: 7 MVKVILLGDGSVGKSSLMQQFVRNEFNSESFHTIGVEVLNKDVRVGSEAITMQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L +D+ +F ++ WR+EFLK A + A PF+LLGNK
Sbjct: 67 ERFRSLRTPFYRGADCCMLTFDLTDPNSFNNINMWRDEFLKHASVDDVAAFPFLLLGNKA 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
D R V + A WC GN+PY+ETSAK N+++AF A + L++
Sbjct: 127 DL--AEQRQVTAEAARAWCRENGNVPYYETSAKTGSNVEDAFQQAARMLLQH 176
>gi|70946255|ref|XP_742861.1| ras family GTP-ase [Plasmodium chabaudi chabaudi]
gi|56522073|emb|CAH74595.1| ras family GTP-ase, putative [Plasmodium chabaudi chabaudi]
Length = 184
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 84/153 (54%), Positives = 111/153 (72%), Gaps = 3/153 (1%)
Query: 45 IGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQ 104
+GADF+TKE +D++ +T+QIWDTAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL+
Sbjct: 19 VGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESLE 78
Query: 105 NWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAK 164
+W++EFL QA P + E PFV++GNK+D + R V K L+WC NIPYFETSAK
Sbjct: 79 SWKDEFLIQASPKDPENFPFVIIGNKVDE--TNKRKVQSVKVLQWCKANNNIPYFETSAK 136
Query: 165 EDCNIDEAFLCVAEIALKNE-HKDIYYQPQGIS 196
N+D+AF +A A+K E ++ Y P+ S
Sbjct: 137 NAINVDQAFDEIARKAMKQELQEEQIYLPETFS 169
>gi|68066072|ref|XP_675019.1| ras family GTP-ase [Plasmodium berghei strain ANKA]
gi|56493957|emb|CAI02563.1| ras family GTP-ase, putative [Plasmodium berghei]
Length = 170
Score = 172 bits (436), Expect = 8e-41, Method: Compositional matrix adjust.
Identities = 83/154 (53%), Positives = 112/154 (72%), Gaps = 3/154 (1%)
Query: 44 TIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESL 103
++GADF+TKE +D++ +T+QIWDTAGQERFQSLG AFYRGADCCVLV+D+ KT+ESL
Sbjct: 4 SVGADFLTKETVVDNEQLTMQIWDTAGQERFQSLGVAFYRGADCCVLVFDLTNYKTYESL 63
Query: 104 QNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSA 163
++W++EFL QA P + E PFV++GNK+D + R V K L+WC NIPYFETSA
Sbjct: 64 ESWKDEFLIQASPKDPENFPFVIIGNKVDE--TNKRKVQSVKVLQWCKANNNIPYFETSA 121
Query: 164 KEDCNIDEAFLCVAEIALKNE-HKDIYYQPQGIS 196
K N+D+AF +A A+K E ++ Y P+ +
Sbjct: 122 KNAINVDQAFDEIARKAMKQELQEEQIYLPETFT 155
>gi|195331478|ref|XP_002032428.1| GM26547 [Drosophila sechellia]
gi|194121371|gb|EDW43414.1| GM26547 [Drosophila sechellia]
Length = 175
Score = 171 bits (434), Expect = 1e-40, Method: Compositional matrix adjust.
Identities = 89/177 (50%), Positives = 114/177 (64%), Gaps = 35/177 (19%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++++LLKVI+LGDS VGKTSLMNQY IWD
Sbjct: 4 RKKSLLKVIILGDSSVGKTSLMNQY--------------------------------IWD 31
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDV +F++L +WR+EFL QA P + E PFV+L
Sbjct: 32 TAGQERFQSLGVAFYRGADCCVLVYDVTAPNSFKNLDSWRDEFLIQASPRDPEHFPFVVL 91
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNK+D D +R V ++A +WC + +IPY+ETSAKE N++ AF +A+ AL+ E
Sbjct: 92 GNKVDLD---NRQVSTRRAQQWCQSKNDIPYYETSAKEGINVEMAFQVIAKNALELE 145
>gi|440295160|gb|ELP88073.1| rab7, putative [Entamoeba invadens IP1]
Length = 200
Score = 171 bits (434), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 88/203 (43%), Positives = 132/203 (65%), Gaps = 5/203 (2%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R L K I++GDSGVGKTSL+N+YV N+FS YKATIG+DF+ K + ++ + TLQIW
Sbjct: 1 MARPTLFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGQTYTLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG ER+ + + FYRG+DCCVL +DV +++F L+ W+ +F++ A+ + P +
Sbjct: 61 DTAGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNDFIEGANLTNPGSVPIFV 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEH 185
+GNKID D ++R V +++A+EWC N YFETSA N+ + F +A E+ + E
Sbjct: 121 VGNKIDCD-PNTREVSEEQAMEWCKLH-NHQYFETSALNASNVGDFFNALATEVVGRREE 178
Query: 186 KDIYYQPQGISETVSEVEQRGGC 208
+PQ I +++ + GGC
Sbjct: 179 DQEPEKPQPIE--INKKQANGGC 199
>gi|126306739|ref|XP_001365780.1| PREDICTED: ras-related protein Rab-7b-like [Monodelphis domestica]
Length = 200
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 85/185 (45%), Positives = 128/185 (69%), Gaps = 6/185 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL+NQYV+ F + Y+ T+GA ++K + +D+ + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLNQYVHKTFYEDYQTTLGASILSKIIMVDNTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV + +F +L WR++ L++ E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDRDSFHALDTWRQDILQKTLQTE-QVFPI 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID D +R V QKKAL+WC + +IPYFE SAK D N+++AF +A AL
Sbjct: 120 VVLGNKIDLD---AREVSQKKALDWCKEK-DIPYFEVSAKNDINVEQAFELLARQALI-R 174
Query: 185 HKDIY 189
H+ I+
Sbjct: 175 HRGIF 179
>gi|281207490|gb|EFA81673.1| Rab GTPase [Polysphondylium pallidum PN500]
Length = 184
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/178 (46%), Positives = 124/178 (69%), Gaps = 4/178 (2%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R ++K++++G+ VGKTS++ +YV +F K TIG DFV K++ ++DK+VTLQ+W
Sbjct: 1 MAPRKVVKIVIIGEKSVGKTSILKRYVDQRFVP-LKPTIGVDFVNKDVMVNDKMVTLQLW 59
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DT+GQERF+SL ++YRGADCC+LV+DV +KT L+ WRE+F+ + + PFV+
Sbjct: 60 DTSGQERFRSLEISYYRGADCCILVFDVTNEKTLHELKMWREDFIDKTGVQNPDQFPFVV 119
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCA-YRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
LGNK+D +R V ++ A + GNI YF+TSAK+ NI+EAF V+ I+L+N
Sbjct: 120 LGNKVDE--PENRKVTERAATNFIKEIGGNIFYFDTSAKDATNIEEAFATVSRISLQN 175
>gi|260812277|ref|XP_002600847.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
gi|229286137|gb|EEN56859.1| hypothetical protein BRAFLDRAFT_121119 [Branchiostoma floridae]
Length = 198
Score = 171 bits (433), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 89/204 (43%), Positives = 129/204 (63%), Gaps = 7/204 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M + +LLKV++LGD GVGK+SLMN++V +KF Q TIG +F+ K++ +D + TLQIW
Sbjct: 1 MSKSSLLKVVLLGDGGVGKSSLMNRFVTDKFDSQSFHTIGVEFLNKDIVVDGEGFTLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+SL + FYRGADCC+L + +N ++F++L W++EFL AD + + PFV+
Sbjct: 61 DTAGQERFKSLRTPFYRGADCCLLTFALNDVQSFKNLGMWKKEFLYYADVRDPDNFPFVV 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNK D + R V ++ WC G++P +ETSAK+ N+D AF ++ E +
Sbjct: 121 LGNKCDM---ADREVATEQVEAWCRENGDLPLYETSAKDAINVDTAFTAAVRRLVRLEER 177
Query: 187 DIYYQPQGISETVSEVEQRGGCAC 210
G S TV Q +C
Sbjct: 178 ----VEAGYSNTVDLNAQAKQSSC 197
>gi|196005255|ref|XP_002112494.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
gi|190584535|gb|EDV24604.1| hypothetical protein TRIADDRAFT_56572 [Trichoplax adhaerens]
Length = 215
Score = 171 bits (432), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 83/181 (45%), Positives = 122/181 (67%), Gaps = 1/181 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K LLKVI+LGD GVGK+SLM +++ +KF + TIG +F++K + ++ T+QI
Sbjct: 3 NDKAAILLKVILLGDGGVGKSSLMTRFIQDKFDENSYHTIGVEFLSKNINVNGITYTIQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++SL + FYRGADCC+L + ++ + +F++L WR+EF+ AD + E PFV
Sbjct: 63 WDTAGQERYRSLRTPFYRGADCCLLTFALDNRNSFDNLATWRKEFIFYADVNDPETFPFV 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+LGNK+D R + + +A EWC +PY ETSAK+ N++ AF+ E A+K E
Sbjct: 123 VLGNKVDIQ-HEQRQIHRSEAEEWCYNNYQMPYLETSAKDSTNVEVAFVKAIEKAVKLEE 181
Query: 186 K 186
K
Sbjct: 182 K 182
>gi|332113279|gb|AEE02039.1| Rab7-like GTPase [Beauveria bassiana]
Length = 137
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 80/134 (59%), Positives = 102/134 (76%), Gaps = 1/134 (0%)
Query: 56 MDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQAD 115
+DD+ VT+Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA
Sbjct: 1 VDDRQVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNNAKSFEALDSWRDEFLIQAS 60
Query: 116 PGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLC 175
P + PFV++GNKID D S RV+ K+A+ +C +G+IPYFETSAKE N+D+AF
Sbjct: 61 PRDPPNFPFVVIGNKIDVD-ESKRVISNKRAMTFCQSKGDIPYFETSAKEAINVDQAFEV 119
Query: 176 VAEIALKNEHKDIY 189
+A AL E + +
Sbjct: 120 IARNALAQEESEEF 133
>gi|340379517|ref|XP_003388273.1| PREDICTED: ras-related protein Rab-9A-like [Amphimedon
queenslandica]
Length = 202
Score = 170 bits (431), Expect = 3e-40, Method: Compositional matrix adjust.
Identities = 77/162 (47%), Positives = 114/162 (70%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LKV++LGD GVGK+SL+ ++V NKF TIG +F+ K++++D TLQIWDTAGQ
Sbjct: 7 FLKVVLLGDGGVGKSSLIQRFVSNKFDPSMFHTIGVEFLNKDMEVDSNRYTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRG+DCC+L Y V+ ++F++L W++EFL AD E ++ PF+++GNK+
Sbjct: 67 ERFKSLRTPFYRGSDCCLLTYAVDDSQSFQNLTMWKKEFLYYADVKEPDSFPFIVIGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V ++A WC +PY+ETSAK+ N+++AF
Sbjct: 127 DV---PDRKVTPEEAARWCEENNKMPYYETSAKDSTNVEQAF 165
>gi|395531204|ref|XP_003767672.1| PREDICTED: ras-related protein Rab-7b-like [Sarcophilus harrisii]
Length = 200
Score = 169 bits (428), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 124/177 (70%), Gaps = 6/177 (3%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +D+ + LQIWDT GQE
Sbjct: 9 LKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKVIMIDNTTLKLQIWDTGGQE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+S+ S FY+G+D C+L +DV + +F +L WR + L++ P E + P V+LGNKID
Sbjct: 69 RFRSIISTFYKGSDGCILAFDVTNRDSFHALDIWRGDILQKVVPME-QVFPMVVLGNKID 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIY 189
D R V Q+KAL+WC + +IPYFE SAK D N+++AF +A AL +H++I+
Sbjct: 128 LD---DREVSQEKALDWCKEK-DIPYFEVSAKNDINVEQAFELLARQALA-QHREIF 179
>gi|167385403|ref|XP_001737332.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899904|gb|EDR26390.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 201
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 95/210 (45%), Positives = 130/210 (61%), Gaps = 17/210 (8%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M LLK I+LG S VGKT+L++++V KF+ YKATIGADF+TK + ++ K VT+Q W
Sbjct: 1 MSSSRLLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSITVEGKEVTMQTW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG ERF SL AFYRGADCC LV+DV+ K+FE L W+ EFLK ++ PFV+
Sbjct: 61 DTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPFVI 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG-NIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+GNKID V+ ++ +W + G + Y E+SA N+D F C+A+ AL++E
Sbjct: 121 IGNKID----KGSVISKEAVTDWIQFNGLDAIYVESSALTGDNVDFVFECLAKKALESEP 176
Query: 186 KDIYYQPQGISETV-------SEVEQRGGC 208
+ QP +ET+ EVEQ C
Sbjct: 177 --LLVQP---NETLVQPFKNDDEVEQAPCC 201
>gi|443718217|gb|ELU08962.1| hypothetical protein CAPTEDRAFT_178369 [Capitella teleta]
Length = 208
Score = 169 bits (427), Expect = 8e-40, Method: Compositional matrix adjust.
Identities = 91/203 (44%), Positives = 135/203 (66%), Gaps = 7/203 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K LLKV++LGD GVGK+SLMN++V NKF Q TIG +F+ K++ ++ + TLQIWD
Sbjct: 10 KNSRLLKVVLLGDGGVGKSSLMNRFVSNKFDTQSFHTIGVEFLNKDIIVNGETFTLQIWD 69
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF+SL + FYRGADCC+L + V+ + ++L W++EFL AD E + PFV+L
Sbjct: 70 TAGQERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSLWKKEFLYYADVQEADLFPFVVL 129
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + + V +++A+ WCA ++PY++TSAK+ N+D AF E ++ E +
Sbjct: 130 GNKVDI---AEQEVAEEEAIAWCA-ANHVPYYQTSAKDAINVDTAFHAAVERVIEQE-RS 184
Query: 188 IYYQPQGISETV--SEVEQRGGC 208
+ + I +TV S+ R GC
Sbjct: 185 LDNSARNIHDTVDLSKKATRSGC 207
>gi|322803055|gb|EFZ23143.1| hypothetical protein SINV_00854 [Solenopsis invicta]
Length = 1447
Score = 169 bits (427), Expect = 9e-40, Method: Compositional matrix adjust.
Identities = 81/166 (48%), Positives = 113/166 (68%), Gaps = 1/166 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
KR LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K+++++ + TLQIWD
Sbjct: 1239 KRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWD 1298
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y V+ + +F +L WR EFLK AD E PF+++
Sbjct: 1299 TAGQERFKTLRTPFYRGSDICLLTYAVDDRMSFRNLALWRSEFLKYADVQEGSTFPFIVV 1358
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
GNK+D S R V ++A WC GN P ETSAK+ N++ AF
Sbjct: 1359 GNKVDVP-ESERQVYTEEAQAWCLENGNPPLVETSAKDATNVEAAF 1403
>gi|440299290|gb|ELP91858.1| GTP-binding protein yptV5, putative [Entamoeba invadens IP1]
Length = 206
Score = 168 bits (426), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/184 (48%), Positives = 118/184 (64%), Gaps = 7/184 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M + LLK I++G SGVGKT+L+ + KF+ YKATIGADFVTK + + +K V++QIW
Sbjct: 1 MSKTRLLKTILIGTSGVGKTALITTFCCEKFTNNYKATIGADFVTKSMIVGNKEVSMQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA--DPGEHEACPF 124
DTAG ERF SL AFYRGADCC LV+DV+ +K+FE L W++EFL+ A G+ PF
Sbjct: 61 DTAGNERFVSLSVAFYRGADCCGLVFDVSNEKSFERLLFWKDEFLRNACTSLGDDRKYPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEW-CAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
V++GNK D V+ EW A N Y ETSA +D AF C+A+ AL++
Sbjct: 121 VIIGNKTDKPA----VITSAMVAEWIVANDVNAVYIETSASTGVGVDTAFNCLAKKALEH 176
Query: 184 EHKD 187
+ D
Sbjct: 177 DPGD 180
>gi|407043376|gb|EKE41918.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 168 bits (425), Expect = 1e-39, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 130/202 (64%), Gaps = 4/202 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R L K I++GDSGVGKTSL+N+YV N+FS YKATIG+DF+ K + ++ TLQIWDT
Sbjct: 4 RPALFKTILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG ER+ + + FYRG+DCCVL +DV +++F L+ W+ EF+ A+ + P ++G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRESFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE-IALKNEHKD 187
NKID + + R V Q++A EWC G+ YFETSA N+ + F +AE + + E ++
Sbjct: 124 NKIDCE-PNKREVSQEQAREWCKLNGH-KYFETSAMSAENVTDLFTTLAEDVVSRREDEE 181
Query: 188 IYYQPQG-ISETVSEVEQRGGC 208
+P I + SE ++ GGC
Sbjct: 182 EPEKPAPIIIQKQSEEKKEGGC 203
>gi|307169889|gb|EFN62398.1| Ras-related protein Rab-9A [Camponotus floridanus]
Length = 231
Score = 168 bits (425), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 80/181 (44%), Positives = 120/181 (66%), Gaps = 1/181 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K+++++ + TLQI
Sbjct: 21 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEGYTLQI 80
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ + +F +L WR EFLK AD E + PF+
Sbjct: 81 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLALWRSEFLKYADVQEDSSFPFI 140
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
++GNK+D S + V ++A WC G+ P ETSAK+ N++ AF ++ + E
Sbjct: 141 VVGNKVDV-AESEKQVSTEEAQAWCLENGSPPLVETSAKDATNVEAAFGAAVDVWARLEA 199
Query: 186 K 186
+
Sbjct: 200 R 200
>gi|67472102|ref|XP_651915.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978608|dbj|BAD34971.1| EhRab7D protein [Entamoeba histolytica]
gi|56468706|gb|EAL46529.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449709825|gb|EMD49016.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 204
Score = 167 bits (423), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 89/202 (44%), Positives = 129/202 (63%), Gaps = 4/202 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
R L K I++GDSGVGKTSL+N+YV N+FS YKATIG+DF+ K + ++ TLQIWDT
Sbjct: 4 RPALFKAILIGDSGVGKTSLINRYVNNQFSDVYKATIGSDFLIKPVTVNGAQYTLQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AG ER+ + + FYRG+DCCVL +DV + +F L+ W+ EF+ A+ + P ++G
Sbjct: 64 AGHERYSCVVTTFYRGSDCCVLCFDVTNRDSFNHLEKWKNEFIDGANATNPASIPIYVVG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE-IALKNEHKD 187
NKID + + R V Q++A EWC G+ YFETSA N+ + F +AE + + E ++
Sbjct: 124 NKIDCE-PNKREVSQEQAREWCKLNGH-KYFETSAMNAENVTDLFTTLAEDVVSRREDEE 181
Query: 188 IYYQPQG-ISETVSEVEQRGGC 208
+P I + SE ++ GGC
Sbjct: 182 EPEKPAPIIIQKQSEEKKEGGC 203
>gi|212723896|ref|NP_001132513.1| uncharacterized protein LOC100193973 [Zea mays]
gi|194694594|gb|ACF81381.1| unknown [Zea mays]
Length = 114
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/88 (88%), Positives = 84/88 (95%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKE+ ++D+LVTLQIWD
Sbjct: 5 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKEVLIEDRLVTLQIWD 64
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVN 95
TAGQERFQSLG AFYRGADCCVLVYDVN
Sbjct: 65 TAGQERFQSLGVAFYRGADCCVLVYDVN 92
>gi|167392605|ref|XP_001740221.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165895750|gb|EDR23368.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 167 bits (423), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 90/202 (44%), Positives = 123/202 (60%), Gaps = 8/202 (3%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
L K+++LGDS VGKTSL+ QY+ F++Q K T+GADF+T+E+ +D K++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKTTVGADFITREIDIDGKVIALQIWDTAG 65
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
ERF SLG F+RGADCCVLV DV + TFE L +W+++ + + PFV++GNK
Sbjct: 66 SERFCSLGPVFFRGADCCVLVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVVVGNK 125
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D R V +K W G YFE SAK NID F+ +A + LK + K Y
Sbjct: 126 SDC-SDEEREVSFEKLSHW--GDGKYTYFECSAKTGWNIDNIFIEIATL-LKEKQKINYS 181
Query: 191 QPQGIS----ETVSEVEQRGGC 208
P+ I E VS ++ + C
Sbjct: 182 MPESIEPCRLEDVSNIKVKKDC 203
>gi|167535786|ref|XP_001749566.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771958|gb|EDQ85617.1| predicted protein [Monosiga brevicollis MX1]
Length = 199
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 78/173 (45%), Positives = 118/173 (68%), Gaps = 3/173 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD GVGK+SLM ++V N F + TIG +F+ K++ +D+K LQIWDTAGQ
Sbjct: 7 LLKVVILGDGGVGKSSLMARFVNNTFDEHNYHTIGVEFLNKDIIVDNKTCHLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+++L FYRG+DCC+ V+D+ + TF+ L W EF + A+ + + PF+L+GNK+
Sbjct: 67 ERYKALRRPFYRGSDCCMFVFDLTDRHTFDHLDAWISEFKEFAEVEDPDNFPFLLVGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D +G R V +AL++C ++PY+ETSAK N++EAFL + + N+
Sbjct: 127 DVEG---RQVAHAQALDFCKGHHDMPYYETSAKTAENVEEAFLTAVRLLMANQ 176
>gi|149058661|gb|EDM09818.1| similar to RAB7-like protein (predicted), isoform CRA_a [Rattus
norvegicus]
Length = 208
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 10 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 69
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 70 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 128
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A EWC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 129 VVLGNKIDLE---DRKVPQEVAHEWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 181
>gi|326933759|ref|XP_003212967.1| PREDICTED: ras-related protein Rab-7b-like [Meleagris gallopavo]
Length = 207
Score = 167 bits (422), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 85/186 (45%), Positives = 129/186 (69%), Gaps = 6/186 (3%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S++ ++ LK+I++G GVGKTSL++QYV+N F + Y+ T+GA +TK + +D + L
Sbjct: 7 SMDASKKVDLKIIIIGALGVGKTSLLHQYVHNTFYEDYRTTLGASILTKVVAVDKTPLKL 66
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDT GQERF+S+ S FY+G+D C+L +DV +++FESL NWR++FL++ P +++ P
Sbjct: 67 QIWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDRESFESLDNWRDDFLEKVIPRDYD-FP 125
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
V+LGNKID R V ++ A WC + +IPYFE SAK + N+ +AF +A+ AL
Sbjct: 126 MVVLGNKIDL---CDRQVSKEIASAWCKEK-DIPYFEVSAKNNINVAQAFETLAKQAL-T 180
Query: 184 EHKDIY 189
+K IY
Sbjct: 181 TYKGIY 186
>gi|157818725|ref|NP_001102798.1| ras-related protein Rab-7b [Rattus norvegicus]
gi|149058662|gb|EDM09819.1| similar to RAB7-like protein (predicted), isoform CRA_b [Rattus
norvegicus]
Length = 199
Score = 166 bits (421), Expect = 4e-39, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 124/177 (70%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A EWC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVPQEVAHEWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>gi|167519497|ref|XP_001744088.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163777174|gb|EDQ90791.1| predicted protein [Monosiga brevicollis MX1]
Length = 144
Score = 166 bits (420), Expect = 5e-39, Method: Compositional matrix adjust.
Identities = 83/147 (56%), Positives = 104/147 (70%), Gaps = 4/147 (2%)
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLV+DV V K+FE+L +WR+EFL QA P + E PF
Sbjct: 1 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTVPKSFETLGSWRDEFLIQASPRDPENFPF 60
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + SR + QK+A+ WC +G IPYFETSAK+ N+D AF +A+ ALK +
Sbjct: 61 VVLGNKIDLE---SRGISQKRAMTWCQSKGGIPYFETSAKDAVNVDTAFQTIAKNALKQK 117
Query: 185 HKDIYYQ-PQGISETVSEVEQRGGCAC 210
D ++ I +E + GCAC
Sbjct: 118 DSDHFHDFDNKIVLDSAEGNKSDGCAC 144
>gi|426239405|ref|XP_004013612.1| PREDICTED: ras-related protein Rab-7b-like [Ovis aries]
Length = 200
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 122/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L+ WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|363743053|ref|XP_001235016.2| PREDICTED: ras-related protein Rab-7b-like [Gallus gallus]
Length = 207
Score = 165 bits (418), Expect = 9e-39, Method: Compositional matrix adjust.
Identities = 84/186 (45%), Positives = 127/186 (68%), Gaps = 6/186 (3%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S++ ++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA +TK + +D + L
Sbjct: 7 SMDSSKKVDLKIIIIGALGVGKTSLLHQYVHKTFYEDYRTTLGASILTKVVAVDKTPLKL 66
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L NWR++FL++ P +H+ P
Sbjct: 67 QIWDTGGQERFRSMVSTFYKGSDGCMLAFDVTDMESFEALDNWRDDFLEKVIPRDHD-FP 125
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
V+LGNKID R V ++ A WC + +IPYFE SAK + N+ +AF +A+ AL
Sbjct: 126 MVVLGNKIDL---CDRQVSKEIASAWCKEK-DIPYFEVSAKNNINVAQAFETLAKQAL-T 180
Query: 184 EHKDIY 189
+K IY
Sbjct: 181 TYKGIY 186
>gi|307208064|gb|EFN85595.1| Ras-related protein Rab-9A [Harpegnathos saltator]
Length = 223
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/165 (47%), Positives = 111/165 (67%), Gaps = 1/165 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K+++++ + TLQI
Sbjct: 13 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQI 72
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ +F++L WR EFLK AD E PF+
Sbjct: 73 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDWTSFKNLTLWRSEFLKYADVREASTFPFI 132
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++GNK+D S + V + A WC GN P ETSAK+ N++
Sbjct: 133 VIGNKVDV-SESEKQVSTEDAQAWCLENGNPPLVETSAKDATNVE 176
>gi|312434891|gb|ADQ74923.1| hypothetical protein, partial [Jatropha curcas]
Length = 130
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 78/130 (60%), Positives = 97/130 (74%)
Query: 81 FYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRV 140
F+RGADCCVLVYDVNV K+F++L NWREEFL QA+P + E PFV+LGNKID DG +SRV
Sbjct: 1 FHRGADCCVLVYDVNVGKSFDNLNNWREEFLIQANPSDPENFPFVVLGNKIDVDGANSRV 60
Query: 141 VPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVS 200
V +KKA WCA +GNIPYFETSAKE N++ AF C+A+ ALKNE ++ Y P+ I
Sbjct: 61 VSEKKAKAWCASKGNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEIYLPETIDVGGG 120
Query: 201 EVEQRGGCAC 210
++ GC C
Sbjct: 121 RQQRSSGCEC 130
>gi|149707819|ref|XP_001490928.1| PREDICTED: ras-related protein Rab-7b-like [Equus caballus]
Length = 200
Score = 164 bits (416), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVLDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVARGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|198427811|ref|XP_002131619.1| PREDICTED: similar to predicted protein [Ciona intestinalis]
Length = 206
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/162 (48%), Positives = 113/162 (69%), Gaps = 4/162 (2%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LKV+++GD GVGK+S+MN+++ +F Q TIG +F+TK ++++ K TLQIWDTAGQ
Sbjct: 7 VLKVVLIGDGGVGKSSIMNRFITGEFDGQSYHTIGVEFLTKNVEVEGKQYTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L Y VN ++F +L+ W++EFL AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCMLTYAVNDAQSFHNLKMWKQEFLYYADIND-DKFPFVVLGNKV 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + V Q A WC G P+ ETSAK++ N+ E F
Sbjct: 126 DV---YDKEVQQSVAQNWCRENGGYPHIETSAKDETNVTECF 164
>gi|335295290|ref|XP_003357460.1| PREDICTED: ras-related protein Rab-7b-like [Sus scrofa]
Length = 200
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 122/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L+ WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALETWRGDVLAKTIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLAGRAL 172
>gi|444706400|gb|ELW47742.1| Solute carrier family 26 member 9 [Tupaia chinensis]
Length = 1191
Score = 164 bits (415), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIMLDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPVE-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A +WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRKVPQELAQDWCKEK-DIPYFEVSAKNDINVVQAFEMLAGRAL 172
>gi|67468620|ref|XP_650338.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978612|dbj|BAD34973.1| EhRab7F protein [Entamoeba histolytica]
gi|56466959|gb|EAL44961.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|407036616|gb|EKE38267.1| Rab family GTPase [Entamoeba nuttalli P19]
gi|449702834|gb|EMD43395.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 201
Score = 164 bits (414), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 94/210 (44%), Positives = 129/210 (61%), Gaps = 17/210 (8%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M LLK I+LG S VGKT+L++++V KF+ YKATIGADF+TK + ++ K VT+Q W
Sbjct: 1 MSSSRLLKTILLGSSNVGKTALIHRFVNQKFTNSYKATIGADFMTKSIIVEGKEVTMQTW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG ERF SL AFYRGADCC LV+DV+ K+FE L W+ EFLK ++ PFV+
Sbjct: 61 DTAGNERFISLSIAFYRGADCCGLVFDVSNPKSFEQLTMWKNEFLKNCTTNKNGKFPFVI 120
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRG-NIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+GNKID V+ ++ +W + + Y E+SA N+D F C+A+ AL++E
Sbjct: 121 IGNKID----KGSVISKEAVDDWIQFNDLDAIYVESSALTGDNVDFVFECLAKKALESEP 176
Query: 186 KDIYYQPQGISETV-------SEVEQRGGC 208
+ QP +ET+ EVEQ C
Sbjct: 177 --LLVQP---NETLVQPFKNDDEVEQAPCC 201
>gi|355714974|gb|AES05182.1| Ras-related protein Rab-7b [Mustela putorius furo]
Length = 173
Score = 164 bits (414), Expect = 3e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-PSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|328777207|ref|XP_394445.4| PREDICTED: ras-related protein Rab-9A-like [Apis mellifera]
gi|380030090|ref|XP_003698691.1| PREDICTED: ras-related protein Rab-9A-like [Apis florea]
Length = 236
Score = 163 bits (413), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K+++++ + TLQI
Sbjct: 21 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQI 80
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ + +F++L WR EFL AD E PF+
Sbjct: 81 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFI 140
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++GNK+D S + V ++A WCA G+ P ETSAK+ N++
Sbjct: 141 VVGNKVDVP-DSEKQVSTEEAQAWCAENGDPPLVETSAKDATNVE 184
>gi|383848562|ref|XP_003699918.1| PREDICTED: ras-related protein Rab-9A-like [Megachile rotundata]
Length = 236
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K+++++ + TLQI
Sbjct: 21 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQI 80
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ + +F++L WR EFL AD E PF+
Sbjct: 81 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFI 140
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++GNK+D S + V ++A WCA G+ P ETSAK+ N++
Sbjct: 141 VVGNKVDVP-ESEKQVSTEEAQAWCAENGDPPLVETSAKDATNVE 184
>gi|67466321|ref|XP_649308.1| small GTP binding protein Rab7 [Entamoeba histolytica HM-1:IMSS]
gi|56465714|gb|EAL43921.1| small GTP binding protein Rab7, putative [Entamoeba histolytica
HM-1:IMSS]
gi|56790048|dbj|BAD82820.1| small GTPase EhRab7I [Entamoeba histolytica]
gi|449710007|gb|EMD49157.1| small GTP -binding protein Rab7, putative [Entamoeba histolytica
KU27]
Length = 204
Score = 163 bits (412), Expect = 4e-38, Method: Compositional matrix adjust.
Identities = 87/202 (43%), Positives = 123/202 (60%), Gaps = 8/202 (3%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
L K+++LGDS VGKTSL+ QY+ F++Q K+T+GADF+T+E+ +D K++ LQIWDTAG
Sbjct: 6 TLFKIVILGDSSVGKTSLLQQYITKTFAEQTKSTVGADFITREIDIDGKIIALQIWDTAG 65
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
ERF SLG F+RGADCC+LV DV + TFE L +W+++ + + PFV++GNK
Sbjct: 66 SERFCSLGPVFFRGADCCILVCDVTNESTFEHLDDWKKQLFQSLSFEDLNNFPFVIVGNK 125
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
D R V +K W G YFE SAK NID F+ +A + LK + K +
Sbjct: 126 SDC-SDEERQVSFEKLSHW--GDGKYTYFECSAKTGWNIDNIFIEIATL-LKEKQKINFS 181
Query: 191 QPQGIS----ETVSEVEQRGGC 208
+ I E VS ++ + C
Sbjct: 182 MDEAIEPCRLEDVSNIKVKKDC 203
>gi|410986345|ref|XP_003999471.1| PREDICTED: ras-related protein Rab-7b-like isoform 1 [Felis catus]
gi|410986347|ref|XP_003999472.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Felis catus]
Length = 200
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-PSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|74005898|ref|XP_848668.1| PREDICTED: ras-related protein Rab-7b-like isoform 2 [Canis lupus
familiaris]
Length = 200
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-PSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|395838740|ref|XP_003792266.1| PREDICTED: ras-related protein Rab-7b-like [Otolemur garnettii]
Length = 199
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 122/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRDDVLAKIVPTE-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---AERKVPQEVAQGWCEEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|354478109|ref|XP_003501258.1| PREDICTED: ras-related protein Rab-7b-like [Cricetulus griseus]
gi|344236710|gb|EGV92813.1| Ras-related protein Rab-7b [Cricetulus griseus]
Length = 199
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 123/177 (69%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSVVSTFYKGSDGCILAFDVTDPESFEALGIWRDDVLAKIIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVPQEVAHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>gi|301786120|ref|XP_002928475.1| PREDICTED: ras-related protein Rab-7b-like [Ailuropoda melanoleuca]
gi|281339452|gb|EFB15036.1| hypothetical protein PANDA_018434 [Ailuropoda melanoleuca]
Length = 200
Score = 163 bits (412), Expect = 5e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDTWRGDVLAKTIPME-PSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|330798347|ref|XP_003287215.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
gi|325082798|gb|EGC36269.1| hypothetical protein DICPUDRAFT_78083 [Dictyostelium purpureum]
Length = 199
Score = 162 bits (411), Expect = 6e-38, Method: Compositional matrix adjust.
Identities = 78/204 (38%), Positives = 132/204 (64%), Gaps = 8/204 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R ++K++++G+ VGKTS++ +YV +F K TIG DFV K++ ++D++VTLQ+W
Sbjct: 1 MTGRRVIKIVIIGEKSVGKTSILKRYVDQRFIT-LKPTIGIDFVNKDVMVNDQMVTLQLW 59
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DT+GQERF+SL ++YRGADCC+LV+DV +K+ L+ WR++F+++ + + PFV+
Sbjct: 60 DTSGQERFRSLEVSYYRGADCCILVFDVTSEKSLHDLKLWRDDFIEKTGVQDADNFPFVV 119
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
LGNK+D +R + +K+A +WC G YF+TSAK++ NI++ F ++ + N
Sbjct: 120 LGNKVD---DPNRKIKEKQAQQWCETNIGGKFIYFDTSAKDNINIEQVFKHISHFS--NF 174
Query: 185 HKDIYYQPQGISETVSEVEQRGGC 208
P+ + ++ E + C
Sbjct: 175 QSIPKTPPEELINITAQDENKSSC 198
>gi|340711429|ref|XP_003394278.1| PREDICTED: ras-related protein Rab-9A-like [Bombus terrestris]
gi|350416155|ref|XP_003490860.1| PREDICTED: ras-related protein Rab-9A-like [Bombus impatiens]
Length = 236
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 77/165 (46%), Positives = 112/165 (67%), Gaps = 1/165 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F + TIG +F+ K++ ++ + TLQI
Sbjct: 21 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNHFDEHSFHTIGVEFLNKDIDINGEAYTLQI 80
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ + +F++L WR EFL AD E PF+
Sbjct: 81 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFKNLALWRSEFLYYADVQEGSTFPFI 140
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++GNK+D S + V ++A WCA G+ P ETSAK+ N++
Sbjct: 141 VVGNKVDVP-DSEKQVSTEEAQAWCAENGDPPLVETSAKDATNVE 184
>gi|109133514|ref|XP_001082679.1| PREDICTED: ras-related protein Rab-7b isoform 2 [Macaca mulatta]
gi|355558838|gb|EHH15618.1| hypothetical protein EGK_01733 [Macaca mulatta]
Length = 189
Score = 162 bits (411), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|355745981|gb|EHH50606.1| hypothetical protein EGM_01463 [Macaca fascicularis]
Length = 189
Score = 162 bits (410), Expect = 7e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|332864183|ref|XP_528612.3| PREDICTED: ras-related protein Rab-7b, partial [Pan troglodytes]
Length = 174
Score = 162 bits (410), Expect = 8e-38, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|402857432|ref|XP_003893259.1| PREDICTED: ras-related protein Rab-7b-like [Papio anubis]
Length = 199
Score = 162 bits (409), Expect = 9e-38, Method: Compositional matrix adjust.
Identities = 83/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|149411574|ref|XP_001509956.1| PREDICTED: ras-related protein Rab-7b-like isoform 1
[Ornithorhynchus anatinus]
Length = 200
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 119/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I+ G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNSRKKVDLKLIITGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIVVDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL YDV ++F ++ +WR + L++ +A P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAYDVTDLESFHAMDDWRGDILEKI-VSTDQAFPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID R V Q+ AL WC + +IPYFE SAK D NI++AF +A AL
Sbjct: 120 VVLGNKIDL---GDRQVSQEVALGWCTEK-DIPYFEVSAKNDINIEQAFETLARRAL 172
>gi|345480117|ref|XP_001606884.2| PREDICTED: ras-related protein Rab-9A-like [Nasonia vitripennis]
Length = 221
Score = 162 bits (409), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 76/165 (46%), Positives = 113/165 (68%), Gaps = 1/165 (0%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N +R LLKV++LGD GVGK+ LMN++V N F +Q TIG +F+ K+++++ + TLQI
Sbjct: 12 NSQRSTLLKVVILGDGGVGKSCLMNRFVSNNFDEQSFHTIGVEFLNKDIEINGESYTLQI 71
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERF++L + FYRG+D C+L Y V+ + +F +L W+ EFL AD E + PF+
Sbjct: 72 WDTAGQERFKTLRTPFYRGSDICLLTYAVDDRTSFRNLTLWKSEFLYYADVQEESSFPFI 131
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++GNK+D S + V ++A WC G+ P ETSAK+ N++
Sbjct: 132 IVGNKVDV-PESDKQVSTEEAKAWCLENGDPPLVETSAKDATNVE 175
>gi|256985158|ref|NP_796377.3| ras-related protein Rab-7b [Homo sapiens]
gi|256985160|ref|NP_001157994.1| ras-related protein Rab-7b [Homo sapiens]
gi|297711722|ref|XP_002832474.1| PREDICTED: ras-related protein Rab-7b-like [Pongo abelii]
gi|397504828|ref|XP_003822982.1| PREDICTED: ras-related protein Rab-7b-like [Pan paniscus]
gi|50401122|sp|Q96AH8.1|RAB7B_HUMAN RecName: Full=Ras-related protein Rab-7b
gi|16877705|gb|AAH17092.1| RAB7B protein [Homo sapiens]
gi|20530864|gb|AAM22519.1| Ras-related protein Rab-7 [Homo sapiens]
gi|387540372|gb|AFJ70813.1| ras-related protein Rab-7b [Macaca mulatta]
gi|410207536|gb|JAA00987.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410249694|gb|JAA12814.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410293164|gb|JAA25182.1| RAB7B, member RAS oncogene family [Pan troglodytes]
gi|410328817|gb|JAA33355.1| RAB7B, member RAS oncogene family [Pan troglodytes]
Length = 199
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|118151120|ref|NP_001071481.1| ras-related protein Rab-7b [Bos taurus]
gi|122132235|sp|Q08DE8.1|RAB7B_BOVIN RecName: Full=Ras-related protein Rab-7b
gi|115305016|gb|AAI23790.1| RAB7B, member RAS oncogene family [Bos taurus]
gi|296479391|tpg|DAA21506.1| TPA: ras-related protein Rab-7b [Bos taurus]
Length = 200
Score = 161 bits (408), Expect = 1e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL+++YV+ F + Y+ T+GA ++K + ++D + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L+ WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|403294876|ref|XP_003938388.1| PREDICTED: ras-related protein Rab-7b-like [Saimiri boliviensis
boliviensis]
Length = 199
Score = 161 bits (407), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPQKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>gi|432116086|gb|ELK37213.1| Ras-related protein Rab-7b [Myotis davidii]
Length = 199
Score = 160 bits (406), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 87/206 (42%), Positives = 127/206 (61%), Gaps = 7/206 (3%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + ++D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEDYQTTLGASILSKIIILNDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPTE-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V LGNKID + R VP + A WC + NIPYFE SAK D N+ +AF +A AL
Sbjct: 120 VALGNKIDLE---DRQVPPEVAQNWCKEK-NIPYFEVSAKNDINVVQAFEMLASRALSRY 175
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
Y I +S +Q G C
Sbjct: 176 RNTENYLTDSIK--LSPEDQTGRRCC 199
>gi|327278641|ref|XP_003224069.1| PREDICTED: ras-related protein Rab-7b-like [Anolis carolinensis]
Length = 200
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 82/173 (47%), Positives = 117/173 (67%), Gaps = 5/173 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+R LK+I++G GVGKTSL++QYV+ KF + Y+ T+GA +TK + +D + LQIWDT
Sbjct: 5 KRVDLKIIIIGALGVGKTSLLHQYVHKKFYEDYRTTLGASILTKMVAVDRTPLKLQIWDT 64
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
GQERF+S+ S FY+G+D C+L +DV +FE L++WRE+FL++ P E + P V+LG
Sbjct: 65 GGQERFRSMVSTFYKGSDGCMLAFDVTDMDSFECLEDWREDFLQKVIPTE-QGFPMVVLG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
NKID + R V ++ A WC + +I YFE SAK D N+ AF +A AL
Sbjct: 124 NKIDLN---DRQVSKETASLWCKEK-DIAYFEVSAKNDINVVNAFDTLARQAL 172
>gi|351710944|gb|EHB13863.1| Ras-related protein Rab-7b, partial [Heterocephalus glaber]
Length = 174
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKMDLKLIIVGALGVGKTSLLHQYVHKTFYEEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++F++L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFKALDVWRDDVLAKIIPVE-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VP + A WC + +PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVPPEMAQGWCEEK-EMPYFEVSAKNDINVGQAFETLARRAL 172
>gi|323307852|gb|EGA61114.1| Ypt7p [Saccharomyces cerevisiae FostersO]
Length = 142
Score = 160 bits (406), Expect = 3e-37, Method: Compositional matrix adjust.
Identities = 77/131 (58%), Positives = 101/131 (77%), Gaps = 2/131 (1%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWDTAGQERFQSLGSAFYRGADC 87
M++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+WDTAGQERFQSLG AFYRGADC
Sbjct: 1 MHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVWDTAGQERFQSLGVAFYRGADC 60
Query: 88 CVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKAL 147
CVLVYDV +FE++++WR+EFL A+ E PFV+LGNKID + S ++V +K A
Sbjct: 61 CVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVILGNKIDAE-ESKKIVSEKSAQ 119
Query: 148 EWCAYRGNIPY 158
E G+I +
Sbjct: 120 ELAKSLGDITF 130
>gi|328773394|gb|EGF83431.1| hypothetical protein BATDEDRAFT_84979 [Batrachochytrium
dendrobatidis JAM81]
Length = 487
Score = 159 bits (403), Expect = 5e-37, Method: Compositional matrix adjust.
Identities = 76/142 (53%), Positives = 98/142 (69%), Gaps = 4/142 (2%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD--KLVTLQ 64
M +LKV+VLGDSGVGKT+L NQ+++ +F Q YKATIGADFVTK + ++ K V+LQ
Sbjct: 1 MSDTTILKVVVLGDSGVGKTALRNQFIHRQFVQSYKATIGADFVTKSVHVESLSKTVSLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERF SLG AF+RGAD C+LVYD + + L+ W +FL+QA PF
Sbjct: 61 IWDTAGQERFHSLGVAFFRGADACILVYDTTNTSSLDHLETWMRDFLRQAGISNPAEFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKA 146
+++GNKID R V +KA
Sbjct: 121 IVVGNKIDLTA--DRTVTAEKA 140
>gi|440793725|gb|ELR14901.1| Rab7/RabGfamily small GTPase [Acanthamoeba castellanii str. Neff]
Length = 186
Score = 159 bits (403), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 90/208 (43%), Positives = 123/208 (59%), Gaps = 35/208 (16%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV++LGDSGVGK+SL+ ++ +FS YKATIGADFVT +L +D + VTLQ+W
Sbjct: 5 VAKVVLLGDSGVGKSSLLTRFTDKRFSGAYKATIGADFVTHDLIVDGREVTLQVW----- 59
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERFQSLG+AF+RGADCCVLV+DVNV A P E PF++LGNK
Sbjct: 60 ERFQSLGTAFFRGADCCVLVFDVNV-----------------AAPSMAERFPFIVLGNKT 102
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD-IYY 190
D D RV+ K A WC G + YFETSAK+ ++++F +A+ A K+ D +
Sbjct: 103 DKD---ERVILTKDAAAWCESHG-MRYFETSAKDGTGVEQSFDVIAQTATKHHIADNAHV 158
Query: 191 QPQGISETV--------SEVEQRGGCAC 210
G+ E + ++ GGC+C
Sbjct: 159 ARGGVDERITLDRKGNFTQPGAEGGCSC 186
>gi|148707755|gb|EDL39702.1| RIKEN cDNA 5430435G22, isoform CRA_a [Mus musculus]
Length = 220
Score = 159 bits (402), Expect = 6e-37, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 22 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 81
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 82 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 140
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R V Q+ WC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 141 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 193
>gi|443718218|gb|ELU08963.1| hypothetical protein CAPTEDRAFT_127231 [Capitella teleta]
Length = 202
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 82/178 (46%), Positives = 121/178 (67%), Gaps = 4/178 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K LLKV++LGD GVGK+SLM+++V NKF TIG +F K++ ++ + TLQIWD
Sbjct: 10 KNSRLLKVVLLGDGGVGKSSLMHRFVSNKFETLSFYTIGVEFRNKDIIVNGETFTLQIWD 69
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF+SL + FYRGADCC+L + V+ + ++L W++EFL AD E + PFV+L
Sbjct: 70 TAGQERFKSLRTPFYRGADCCLLTFGVDDMVSLKNLSFWKKEFLYNADVQEADLFPFVVL 129
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
GNK+D + + V +++A+ WCA ++PY++TSAK+ N+D AF E ++ E
Sbjct: 130 GNKVDI---AEQEVAEEEAIAWCA-ANHVPYYQTSAKDAINVDTAFHAAVERVIEQER 183
>gi|296238289|ref|XP_002764097.1| PREDICTED: ras-related protein Rab-7b-like [Callithrix jacchus]
Length = 199
Score = 159 bits (402), Expect = 7e-37, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNGINVVQAFEMLASRAL 172
>gi|291236635|ref|XP_002738246.1| PREDICTED: predicted protein-like [Saccoglossus kowalevskii]
Length = 348
Score = 159 bits (402), Expect = 8e-37, Method: Compositional matrix adjust.
Identities = 80/148 (54%), Positives = 99/148 (66%), Gaps = 5/148 (3%)
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLV+DV + TF+SL +WR+EFL QA P + E PF
Sbjct: 204 IWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKSLDSWRDEFLIQASPRDPENFPF 263
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + +R V K+A WC + +IPYFETSAKE N+++AF +A+ AL E
Sbjct: 264 VVLGNKIDLE---NRAVSTKRAQAWCHSKNDIPYFETSAKESINVEQAFQTIAKNALLQE 320
Query: 185 HKDIYYQ--PQGISETVSEVEQRGGCAC 210
YQ P I + + GC C
Sbjct: 321 TDAELYQDFPDQIKINQDQKPRSDGCGC 348
>gi|21704002|ref|NP_663484.1| ras-related protein Rab-7b [Mus musculus]
gi|50401091|sp|Q8VEA8.1|RAB7B_MOUSE RecName: Full=Ras-related protein Rab-7b
gi|26326669|dbj|BAC27078.1| unnamed protein product [Mus musculus]
gi|112293051|dbj|BAF02903.1| Rab42 [Mus musculus]
gi|148707757|gb|EDL39704.1| RIKEN cDNA 5430435G22, isoform CRA_c [Mus musculus]
Length = 199
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R V Q+ WC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>gi|299473639|emb|CBN78033.1| Rab7L, RAB family GTPase [Ectocarpus siliculosus]
Length = 365
Score = 159 bits (401), Expect = 9e-37, Method: Compositional matrix adjust.
Identities = 94/218 (43%), Positives = 130/218 (59%), Gaps = 18/218 (8%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
MK R LLK++VLG S VGKTSLM +Y F+ + TIGADF+TKE+ D+ + LQIW
Sbjct: 148 MKPRVLLKIVVLGCSNVGKTSLMKRYAAGDFTDYRRPTIGADFMTKEVVEGDQPMLLQIW 207
Query: 67 DTAGQERFQ--SLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
DTAGQERF SLGS F+RGA+ +LVYDV +FE + WREE L + D H+ P
Sbjct: 208 DTAGQERFHGGSLGSGFFRGANAALLVYDVACAVSFEQVAMWREELLVRLDVDPHD-FPI 266
Query: 125 VLLGNKIDTDGGSS----RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
V++GNK+D G + V + + ++WC +G + + ETSAK+ ++ A VA +A
Sbjct: 267 VVIGNKVDLATGLAMDGIHGVDKTRVMKWCEMQG-MGHIETSAKDGTGVEVAMQAVAVLA 325
Query: 181 LKNEHK---DIYYQPQ-GISETVSEVEQR------GGC 208
L+ + K D+ P G T+ +QR GGC
Sbjct: 326 LEQKRKRERDLALNPSLGGGTTLDLADQRARQQRTGGC 363
>gi|91085159|ref|XP_970524.1| PREDICTED: similar to ras-related protein Rab-9 [Tribolium
castaneum]
gi|270009063|gb|EFA05511.1| hypothetical protein TcasGA2_TC015698 [Tribolium castaneum]
Length = 214
Score = 159 bits (401), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 85/204 (41%), Positives = 123/204 (60%), Gaps = 6/204 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ LLKV++LGD GVGK+ LMN++V N+F + TIG +F+ K++++D + TLQIWDT
Sbjct: 6 KNTLLKVVILGDGGVGKSCLMNRFVSNQFDEHSFHTIGVEFLNKDIEIDGETYTLQIWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF++L + FYRG+D C+L Y V+ + +F +LQ W+ EFL AD E+ PF+++G
Sbjct: 66 AGQERFKTLRTPFYRGSDICMLTYAVDDKHSFRNLQMWKNEFLYYADVKENVQFPFIVVG 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-- 186
NK D + + R V Q + WC G ETSAK N+ +AF + LK E +
Sbjct: 126 NKSDVE-QNEREVSQIEMETWCTENGISACIETSAKNASNVHDAFAIAVQHWLKLETRAD 184
Query: 187 --DIYYQPQGISETVSEVEQRGGC 208
D Y + T + E R C
Sbjct: 185 KNDCIY-ADTVDLTKKQSENRTSC 207
>gi|297847216|ref|XP_002891489.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
gi|297337331|gb|EFH67748.1| hypothetical protein ARALYDRAFT_891777 [Arabidopsis lyrata subsp.
lyrata]
Length = 101
Score = 158 bits (400), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 78/107 (72%), Positives = 85/107 (79%), Gaps = 9/107 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSG YV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSG---------YVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 54
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA 114
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE L NWREEFL Q
Sbjct: 55 TAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQV 101
>gi|431892879|gb|ELK03307.1| Ras-related protein Rab-7b [Pteropus alecto]
Length = 236
Score = 158 bits (399), Expect = 1e-36, Method: Compositional matrix adjust.
Identities = 80/177 (45%), Positives = 120/177 (67%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F + Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHQYVHKTFYEDYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALNTWRGDVLAKIIPVE-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R V ++ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDL---ADRQVSREVAQGWCKEK-DIPYFEVSAKNDINVVQAFETLAGQAL 172
>gi|350591497|ref|XP_003483284.1| PREDICTED: ras-related protein Rab-7a-like [Sus scrofa]
Length = 214
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/125 (60%), Positives = 93/125 (74%), Gaps = 3/125 (2%)
Query: 60 LVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEH 119
L++ QIWDTAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P +
Sbjct: 63 LLSPQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDP 122
Query: 120 EACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
E PFV+LGNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A
Sbjct: 123 ENFPFVVLGNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARN 179
Query: 180 ALKNE 184
ALK E
Sbjct: 180 ALKQE 184
>gi|66806927|ref|XP_637186.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74996730|sp|Q54K69.1|RAB7B_DICDI RecName: Full=Ras-related protein Rab-7B
gi|60465594|gb|EAL63676.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 197
Score = 155 bits (391), Expect = 1e-35, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 117/168 (69%), Gaps = 10/168 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K R ++KV+++G+ VGKTS++ +YV +F K TIG DFV + + +VTLQ+WD
Sbjct: 3 KGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDFV----MVSENMVTLQLWD 57
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T+GQERF+SL ++YRGAD C+LV+DV +KT L+ WR++F+++ + + PF++L
Sbjct: 58 TSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIIL 117
Query: 128 GNKIDTDGGSSRVVPQKKALEWCA--YRGNIPYFETSAKEDCNIDEAF 173
GNKID +RVV +K A++WC GN+ YF+TSAK++ NI++ F
Sbjct: 118 GNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVF 162
>gi|348578117|ref|XP_003474830.1| PREDICTED: ras-related protein Rab-7b-like [Cavia porcellus]
Length = 196
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 78/177 (44%), Positives = 119/177 (67%), Gaps = 8/177 (4%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G+ GVGKTSL++QYV+ F +Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPQKKVDLKLIIVGELGVGKTSLLHQYVHKTFYGEYQTTLGASILSKVIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + + ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDVWRGDILAKME----QSYPM 116
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VP + A WC + +I YFE SAK D N+ +AF +A AL
Sbjct: 117 VVLGNKIDLE---DRKVPPEMAQGWCEEK-DISYFEVSAKNDINVAQAFEVLARQAL 169
>gi|440295670|gb|ELP88577.1| hypothetical protein EIN_335590 [Entamoeba invadens IP1]
Length = 206
Score = 154 bits (390), Expect = 2e-35, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 122/191 (63%), Gaps = 7/191 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M +L KV+VLG++ VGKTSL+ QY+ KF ++ K+T+GADF+T E+++D + V LQIW
Sbjct: 1 MASTSLFKVVVLGEANVGKTSLLTQYITKKFYEKTKSTVGADFITHEVEVDGQTVVLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ-ADPGEHEACPFV 125
DTAG ERF SLG F+RGA+CCVLV D+ K+FE + +W++ L + + E+ PFV
Sbjct: 61 DTAGSERFCSLGPVFFRGAECCVLVCDMTNAKSFEKIDSWKKVLLSSLSQQDDIESFPFV 120
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAY-RGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
++GNK D +V + + AY G YFE SAK N+D F+ VA+I LK +
Sbjct: 121 IVGNKSDCTDEERQVTFAQLS----AYGGGKYSYFECSAKTGWNVDTIFIEVAKI-LKQK 175
Query: 185 HKDIYYQPQGI 195
K + P+ I
Sbjct: 176 SKILSNSPELI 186
>gi|148236476|ref|NP_001085745.1| MGC80651 protein [Xenopus laevis]
gi|49116806|gb|AAH73279.1| MGC80651 protein [Xenopus laevis]
Length = 201
Score = 154 bits (388), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/179 (43%), Positives = 118/179 (65%), Gaps = 11/179 (6%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+ ++G G GKTSL+NQYV+ F Y+ T+GA ++K +Q+D+ + LQIWDT GQE
Sbjct: 9 LKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKIIQLDNTNLNLQIWDTGGQE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF++L S FY+G+D C+LV+DV +++F L+ WR++FL + P + P ++LGNKID
Sbjct: 69 RFRTLVSTFYKGSDGCLLVFDVTDEESFSCLEFWRKDFLDKIPPPAADF-PMIVLGNKID 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D R V ++ A+ WC + N+ Y E SAK + N++ AF +A+ AL I+YQ
Sbjct: 128 LD---DRQVSKESAMTWCKGK-NLSYLEVSAKNNVNVERAFEMLAKKAL------IHYQ 176
>gi|403346646|gb|EJY72726.1| Small GTPase Rab7, putative [Oxytricha trifallax]
Length = 201
Score = 153 bits (387), Expect = 3e-35, Method: Compositional matrix adjust.
Identities = 78/157 (49%), Positives = 106/157 (67%), Gaps = 6/157 (3%)
Query: 30 NQYVYNKFSQQYKATIGADFVTKELQMDD----KLVTLQIWDTAGQERFQSLGSAFYRGA 85
+ Y+ SQ YK TIGADF +K+L++ + K VTLQIWDTAGQER+QSLG AFYRGA
Sbjct: 7 SHYIRKSISQVYKPTIGADFHSKKLEIMEGDELKSVTLQIWDTAGQERYQSLGVAFYRGA 66
Query: 86 DCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKK 145
+ CVLVYD+ Q++FE+L W+++FL +A+P + + PF + GNK+D + R VP K
Sbjct: 67 EACVLVYDITNQRSFENLTIWKQDFLVKANPKDPDNFPFFVFGNKVDK--PNERKVPVPK 124
Query: 146 ALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
EW NIPY ETSA + N++ AF +A+ LK
Sbjct: 125 VEEWLRKNNNIPYDETSAMDGLNVEIAFNRIAQQLLK 161
>gi|2190|emb|CAA39797.1| rab9 [Canis lupus familiaris]
Length = 172
Score = 152 bits (384), Expect = 8e-35, Method: Compositional matrix adjust.
Identities = 72/139 (51%), Positives = 98/139 (70%), Gaps = 3/139 (2%)
Query: 35 NKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDV 94
NKF Q TIG +F+ K+L++D VT+QIWDTAGQERF+SL + FYRG+DCC+L + V
Sbjct: 1 NKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRGSDCCLLTFSV 60
Query: 95 NVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRG 154
+ ++F++L NW++EF+ AD E E+ PFV+LGNKID S R V ++A WC G
Sbjct: 61 DDSQSFQNLSNWKKEFIYYADVKEPESFPFVILGNKIDI---SERQVSTEEAQAWCRDNG 117
Query: 155 NIPYFETSAKEDCNIDEAF 173
+ PYFETSAK+ N+ AF
Sbjct: 118 DYPYFETSAKDATNVAAAF 136
>gi|123504513|ref|XP_001328770.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736250|gb|AAX97454.1| small Rab GTPase Rab7b [Trichomonas vaginalis]
gi|121911717|gb|EAY16547.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 202
Score = 152 bits (384), Expect = 9e-35, Method: Compositional matrix adjust.
Identities = 81/202 (40%), Positives = 120/202 (59%), Gaps = 5/202 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ KV+VLGD+GVGKT+L++Q+V +F +KATIGADF +K + +D + + +QIWDT
Sbjct: 6 KTKTFKVVVLGDTGVGKTTLIHQFVNGEFIADFKATIGADFSSKIMTVDGQRIYIQIWDT 65
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF ++G+ FYRG D C+LVYD ++F L WRE+ ++ P ++
Sbjct: 66 AGQERFHAVGATFYRGTDACILVYDCTQVESFHRLSFWREDLFTKSQMEPDPKFPIIIFS 125
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK D + S + V + A +W G P FE SAK N+ + FL + EI L N KD
Sbjct: 126 NKSDLE--SQKQVNIEDARQWAEQNG-YPLFEVSAKSGANVQDGFLKIIEIYLANS-KDP 181
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
+PQ I+ +++ +Q C
Sbjct: 182 NNRPQ-ITLKLTDTKQDKKPCC 202
>gi|193683808|ref|XP_001946007.1| PREDICTED: ras-related protein Rab-9B-like [Acyrthosiphon pisum]
Length = 217
Score = 152 bits (383), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 74/184 (40%), Positives = 120/184 (65%), Gaps = 4/184 (2%)
Query: 2 DISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLV 61
D ++ +K+ +LKV++LG+S VGK+ LMN++V N FS T+G +F+ KEL ++ +
Sbjct: 3 DKTILVKQNPILKVVILGNSNVGKSCLMNRFVSNSFSDHTLHTLGVEFLQKELDVNGIVY 62
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
TLQIWDTAGQERF++L + FYRG D C+L + V+ ++F+++ +W++EFL + +
Sbjct: 63 TLQIWDTAGQERFRTLRTPFYRGTDICLLTFAVDDVQSFKTVDSWKKEFLHYSKTTDVNF 122
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
PF+++ K+D RVV +++A +WC+ + PY ETS+K D NI+ AF E+
Sbjct: 123 -PFLVVATKVDLQD---RVVSREEANKWCSEYLSAPYVETSSKTDMNIETAFTLAVEVWA 178
Query: 182 KNEH 185
E
Sbjct: 179 STER 182
>gi|339247517|ref|XP_003375392.1| GTP-binding protein YPT7 [Trichinella spiralis]
gi|316971272|gb|EFV55074.1| GTP-binding protein YPT7 [Trichinella spiralis]
Length = 146
Score = 151 bits (382), Expect = 1e-34, Method: Compositional matrix adjust.
Identities = 72/122 (59%), Positives = 91/122 (74%), Gaps = 2/122 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV +FS QYKATIGADF+TK++ +DD+ VT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKRFSNQYKATIGADFLTKDVVVDDRFVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREE--FLKQADPGEHEACPFV 125
TAGQERFQSLG AFYRGADCCVL+ ++ + E+ W+ L + G H F
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLILNIFLSLCLETKLIWKITPLVLNEHSSGVHRKTTFR 123
Query: 126 LL 127
+L
Sbjct: 124 IL 125
>gi|289742899|gb|ADD20197.1| Ras-related GTPase [Glossina morsitans morsitans]
Length = 252
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 118/194 (60%), Gaps = 15/194 (7%)
Query: 5 VNMKRRN---LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLV 61
+NM+ N LLKV++LGD GVGK+ LMN++V N++ + TIG +F+ K++ +D +
Sbjct: 1 MNMRPPNKSTLLKVVILGDGGVGKSCLMNRFVSNRYDENNFHTIGVEFMNKDVNVDGEKY 60
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPG-EHE 120
TLQIWDTAGQERF++L + FYRG+D C+L Y ++ +F L+ WREEFL AD + E
Sbjct: 61 TLQIWDTAGQERFRALRTPFYRGSDVCLLCYAIDDHDSFRGLKQWREEFLHYADVNVKSE 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLC----- 175
F+++GNK D R + + +WC + Y ETS+K NI EAF
Sbjct: 121 RFSFIVVGNKNDL-ASQCRQISSDEVKQWCEKFHIVSYIETSSKAATNISEAFTLAIRQW 179
Query: 176 -----VAEIALKNE 184
+AE+ LK++
Sbjct: 180 KHMERIAEVELKSQ 193
>gi|440893582|gb|ELR46290.1| Ras-related protein Rab-7b [Bos grunniens mutus]
Length = 212
Score = 150 bits (379), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 80/189 (42%), Positives = 121/189 (64%), Gaps = 17/189 (8%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL+++YV+ F + Y+ T+GA ++K + ++D + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 65 ------------IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLK 112
+WDT GQERF+S+ S FY+G+D CVL +DV ++FE+L+ WR + L
Sbjct: 61 PLITAPWGHCSFLWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLA 120
Query: 113 QADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEA 172
+ P E + P V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +A
Sbjct: 121 KTIPME-QPYPMVVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQA 175
Query: 173 FLCVAEIAL 181
F +A AL
Sbjct: 176 FEMLAGRAL 184
>gi|443924185|gb|ELU43249.1| glycoside hydrolase family 3 protein [Rhizoctonia solani AG-1 IA]
Length = 1124
Score = 150 bits (378), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 75/136 (55%), Positives = 94/136 (69%), Gaps = 7/136 (5%)
Query: 56 MDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNW-----REEF 110
+DD+LVT+Q+WDTAGQERFQSLG AFYRGADCCVLVYDVN K S W +
Sbjct: 2 VDDRLVTMQLWDTAGQERFQSLGVAFYRGADCCVLVYDVNSAKV-RSSSTWPAATDSHDL 60
Query: 111 LKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNID 170
++ P E PFV+LGNKID + + R V QK+A+ WC +GNIPYFETSAKE N++
Sbjct: 61 DSRSRPSTAETFPFVVLGNKIDVE-ENKRQVSQKRAMTWCQSKGNIPYFETSAKEAINVE 119
Query: 171 EAFLCVAEIALKNEHK 186
+AF +A+ AL E +
Sbjct: 120 QAFQTIAKNALAQEEE 135
>gi|148230058|ref|NP_001091168.1| RAB7B, member RAS oncogene family [Xenopus laevis]
gi|120538730|gb|AAI29678.1| LOC100036928 protein [Xenopus laevis]
Length = 201
Score = 150 bits (378), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 117/179 (65%), Gaps = 11/179 (6%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+ ++G G GKTSL+NQYV+ F Y+ T+GA ++K +Q+D+ + LQIWDT GQE
Sbjct: 9 LKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQIWDTGGQE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF++L S FY+G+D C+LV+DV +++F L+ WR++FL + P + P ++LGNKID
Sbjct: 69 RFRTLVSTFYKGSDGCLLVFDVTDEESFACLEFWRKDFLDKIPPPAADF-PLIVLGNKID 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
+ R V ++ A+ WC + + Y E SAK + N++ AF +A+ AL I+YQ
Sbjct: 128 LN---DRQVSKESAMTWCKGK-KVSYLEVSAKNNVNVELAFEILAKKAL------IHYQ 176
>gi|156717682|ref|NP_001096381.1| RAB7B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|134023973|gb|AAI35956.1| LOC100124979 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 149 bits (376), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 76/179 (42%), Positives = 116/179 (64%), Gaps = 11/179 (6%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+ ++G G GKTSL+NQYV+ F Y+ T+GA ++K +Q+D+ + LQIWDT GQE
Sbjct: 9 LKINIIGPMGTGKTSLLNQYVHKWFLNDYQNTLGAHLLSKTIQLDNTNLNLQIWDTGGQE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF++L S FY+G+D C+LV+DV + +F L+ WR++FL + P + P ++LGNKID
Sbjct: 69 RFRTLVSTFYKGSDGCLLVFDVTDEDSFSCLEFWRKDFLDKIPPPIADF-PMIVLGNKID 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
+ R V ++ A+ WC + N+ Y E SAK + N++ AF ++ AL I+YQ
Sbjct: 128 LN---DRQVSKELAMSWCKGK-NVSYLEVSAKNNVNVELAFEMLSRKAL------IHYQ 176
>gi|170046060|ref|XP_001850603.1| ras-related protein Rab-9 [Culex quinquefasciatus]
gi|167868965|gb|EDS32348.1| ras-related protein Rab-9 [Culex quinquefasciatus]
Length = 233
Score = 148 bits (374), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 76/162 (46%), Positives = 107/162 (66%), Gaps = 2/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD GVGK+ LMN++V N F TIG +F+ K++Q+D++ TLQIWDTAGQ
Sbjct: 12 LLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVDNERFTLQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF++L + FYRG+D C+L Y V+ + +F +L WREEFLK D + + PF+++G K
Sbjct: 72 ERFKALRTPFYRGSDICLLAYAVDDKSSFRALIQWREEFLKYYDV-KADRFPFIVVGTKS 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++ EWC + ETSAK N+ EAF
Sbjct: 131 DIP-VAQRQVTAEEVSEWCQEHHVAAFIETSAKSSENVYEAF 171
>gi|154422751|ref|XP_001584387.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121918634|gb|EAY23401.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 190
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 108/175 (61%), Gaps = 3/175 (1%)
Query: 18 LGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSL 77
+GDS VGKT+L++ +V N+F + +KATIGADF +K + +D + LQIWDTAG+ERF S+
Sbjct: 1 MGDSSVGKTTLIHSFVNNEFCEDFKATIGADFFSKTVTVDGTTIDLQIWDTAGEERFHSV 60
Query: 78 GSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGS 137
G AFYRG D C+LVYD+ TF+ + W ++ L +A +A P +L GNKID
Sbjct: 61 GVAFYRGTDACLLVYDITQIDTFKRVGVWLDDLLNKAGITNPDAFPIMLFGNKIDL--AD 118
Query: 138 SRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
R VP ++A +W A +FE SAK N+++ F V L+N + + P
Sbjct: 119 QRQVPTEEARQW-ANSKRCSFFEVSAKTQENVEDGFTEVLRKFLQNHDRAVQTSP 172
>gi|215259749|gb|ACJ64366.1| Ras-related GTPase [Culex tarsalis]
Length = 147
Score = 148 bits (373), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 71/121 (58%), Positives = 88/121 (72%), Gaps = 3/121 (2%)
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG AFYRGADCCVLVYD TF++L +WR+EFL QA P + + PFV
Sbjct: 1 WDTAGQERFQSLGVAFYRGADCCVLVYDTTAPNTFKNLDSWRDEFLIQASPRDPDHFPFV 60
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+LGNKID + +R V K+A +WC + +IPYFETSAKE N+D AF +A+ AL E
Sbjct: 61 VLGNKIDLE---NRAVSTKRAQQWCQAKNDIPYFETSAKEGINVDLAFQTIAKNALAQES 117
Query: 186 K 186
+
Sbjct: 118 E 118
>gi|440792353|gb|ELR13578.1| RAB family member (rab7), putative [Acanthamoeba castellanii str.
Neff]
Length = 206
Score = 147 bits (372), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/158 (44%), Positives = 102/158 (64%), Gaps = 3/158 (1%)
Query: 19 GDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLG 78
GD+ VGKTSLM +YV + + YKATIGADF+ K++ + D VT+QIWDTAGQ+RF +LG
Sbjct: 16 GDASVGKTSLMQRYVKGGYKEGYKATIGADFLPKDVVVQDHFVTMQIWDTAGQDRFDTLG 75
Query: 79 SAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSS 138
FYRG D CV VYDV + E++ W++++++ F + GNK D +
Sbjct: 76 RVFYRGTDICVFVYDVTNPASLENIHKWKQQYVEAQSSTMDGHTVFAVFGNKADLE--DK 133
Query: 139 RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
RVV QK+A +WC G +P++ SAK+ N+++AF +
Sbjct: 134 RVVSQKRAEDWCQANG-MPHYVVSAKDGHNVEQAFAVL 170
>gi|157119506|ref|XP_001659411.1| ras-related protein Rab-9, putative [Aedes aegypti]
gi|108875316|gb|EAT39541.1| AAEL008673-PA [Aedes aegypti]
Length = 232
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/187 (43%), Positives = 119/187 (63%), Gaps = 5/187 (2%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD GVGK+ LMN++V N F TIG +F+ K++Q++++ TLQIWDTAGQ
Sbjct: 12 LLKVVILGDGGVGKSCLMNRFVSNFFDANSFHTIGVEFLNKDIQVENERYTLQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF++L + FYRG+D C+L Y V+ + +F +L WREEFLK D + + PF+++G K
Sbjct: 72 ERFKALRTPFYRGSDICLLAYAVDDKASFRALIQWREEFLKYYDV-KADRFPFIVVGTKN 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF-LCVAEIAL--KNEHKDI 188
D +V+ ++ + EWC + ETSAK N+ EAF L V + K+ +D+
Sbjct: 131 DIPAAQRQVMAEEVS-EWCQEHHVAAFIETSAKTSDNVYEAFALAVKQWQRLEKSTERDL 189
Query: 189 YYQPQGI 195
Q Q I
Sbjct: 190 RAQGQDI 196
>gi|403347422|gb|EJY73133.1| Ras-related protein RABG2 [Oxytricha trifallax]
Length = 234
Score = 147 bits (371), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 81/181 (44%), Positives = 111/181 (61%), Gaps = 12/181 (6%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD--------KL 60
+++ LKVI++GDSGVGKTSL+ + Y K + K TIGA+F K++ + D K
Sbjct: 2 QKSFLKVIIIGDSGVGKTSLLEAFNYQKIQKNSKPTIGAEFTKKKITLGDYPDSKYKGKE 61
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
V LQ+WDTAGQERFQSL ++FYRG+DCC+LV+DV+ +T+ESL NWRE F +Q + +
Sbjct: 62 VNLQLWDTAGQERFQSLCTSFYRGSDCCMLVFDVSQIETYESLDNWREVF-QQTTGDQTQ 120
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
P +L+GNK D + V Q +W Y ETSA + +D F VA A
Sbjct: 121 EIPIILIGNKSDKPKAINTDVVQS---DWVQTGKAKAYIETSALKVLGVDNIFNSVAYHA 177
Query: 181 L 181
L
Sbjct: 178 L 178
>gi|357620515|gb|EHJ72673.1| putative ras-related protein Rab-9 [Danaus plexippus]
Length = 228
Score = 147 bits (370), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 80/197 (40%), Positives = 118/197 (59%), Gaps = 7/197 (3%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N + LLK+++LGD GVGK+ LM++++ N F TIG +F+ K +++ K TLQI
Sbjct: 12 NANKSVLLKIVILGDGGVGKSCLMSRFISNHFDDHNFHTIGVEFMNKMIEVGGKQYTLQI 71
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEH-EACPF 124
WDTAGQERF+SL + FYRG D C+L Y ++ + +F +++ W EFL A E PF
Sbjct: 72 WDTAGQERFKSLRTPFYRGTDICILAYAIDDRSSFNNIKTWLNEFLNYAGVKNGIEKFPF 131
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF-LCV---AEIA 180
+++GNK D R VP ++ +WC Y ETSAK D N+ EAF L V A++
Sbjct: 132 IVVGNKSDV-SSKDREVPYEQLKQWCEENKISTYLETSAKTDNNVLEAFSLSVQRWADLE 190
Query: 181 LKNEHK-DIYYQPQGIS 196
K E + +Y+ P ++
Sbjct: 191 QKAEKELRMYHHPDTVT 207
>gi|93359568|gb|ABF13310.1| Rab7 [Phaseolus vulgaris]
Length = 110
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 72/111 (64%), Positives = 87/111 (78%), Gaps = 4/111 (3%)
Query: 98 KTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIP 157
K+F++L NW EEFLKQA+P + PF+LLGNKID DGG+SRVV +KKA +WCA +GNIP
Sbjct: 2 KSFDTLDNWHEEFLKQANPPDPRTFPFILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIP 61
Query: 158 YFETSAKEDCNIDEAFLCVAEIALKNEH-KDIYYQPQGISE-TVSEVEQRG 206
YFETSAKED N+D AFLC+A+ AL NEH +DIY+ QGI E V E EQR
Sbjct: 62 YFETSAKEDFNVDAAFLCIAKAALANEHEQDIYF--QGIPEAAVPENEQRS 110
>gi|123501259|ref|XP_001328031.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|62736256|gb|AAX97457.1| small Rab GTPase RabA1 [Trichomonas vaginalis]
gi|121910969|gb|EAY15808.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 195
Score = 146 bits (368), Expect = 5e-33, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 119/202 (58%), Gaps = 7/202 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M+ + K I++G SGVGKT+L+ + V NKF ++TIG +F + +++DD++V LQIW
Sbjct: 1 MESSSTFKFIIIGSSGVGKTALLRRLVENKFVHDQQSTIGVEFDSTSIEVDDQVVKLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERF+S+ A++R A VLV+DV ++TF+ + W + DP + +L
Sbjct: 61 DTAGQERFRSIAKAYFRNAVGVVLVFDVTERRTFDDVNMWLNDVHSLCDP----SARVIL 116
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
+GNK TD SRV+P +A + +R + Y ETSA+ N+ F +A ++ K
Sbjct: 117 VGNK--TDLADSRVIPVSEAEAYANHR-KLAYIETSARAGDNVKAVFTKLATEVYRSSAK 173
Query: 187 DIYYQPQGISETVSEVEQRGGC 208
D P+ I+ T S E+ G C
Sbjct: 174 DPSVNPKSITATGSTTEKSGCC 195
>gi|323509277|dbj|BAJ77531.1| cgd7_1680 [Cryptosporidium parvum]
Length = 178
Score = 146 bits (368), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 80/156 (51%), Positives = 99/156 (63%), Gaps = 7/156 (4%)
Query: 60 LVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEH 119
+ +L IWDTAGQERFQSLG AFYRGADCC LVYD+ K+FE L WREEFL QA P +
Sbjct: 25 IFSLWIWDTAGQERFQSLGVAFYRGADCCALVYDMTNPKSFEGLDAWREEFLIQATPKDP 84
Query: 120 EACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
+ PFV+LGNK+D D SR V +KA WC + NI YFETSAK N+D AF +
Sbjct: 85 NSFPFVVLGNKLDLD-QKSRKVSSQKASAWCKSK-NIEYFETSAKNATNVDAAFEEIGRR 142
Query: 180 ALKNE-HKDIYYQPQGISETVSEVEQR----GGCAC 210
AL E +D Y P+ ++ + + GGC+C
Sbjct: 143 ALYRETSEDQVYIPEPLTLNNNNQQHHEIGFGGCSC 178
>gi|194762186|ref|XP_001963237.1| GF14043 [Drosophila ananassae]
gi|190616934|gb|EDV32458.1| GF14043 [Drosophila ananassae]
Length = 253
Score = 145 bits (367), Expect = 7e-33, Method: Compositional matrix adjust.
Identities = 77/191 (40%), Positives = 117/191 (61%), Gaps = 12/191 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+R LLKV++LGD GVGK++L+N++V N++ + TIG +F+ K++++D + TLQIWD
Sbjct: 8 QRSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIEVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLNLWRNEFLMYADV-DADKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D + R V + WCA + + ETS+K N+ EAF CVA
Sbjct: 127 GNKNDLP-VAKRQVTYEAVQHWCAEQKIASHIETSSKAATNVTEAFTLGLRQWRHMECVA 185
Query: 178 EIALKNEHKDI 188
E L+ + I
Sbjct: 186 ESELRQQGDTI 196
>gi|403352763|gb|EJY75899.1| Ras-related protein Rab-7a [Oxytricha trifallax]
Length = 320
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 72/157 (45%), Positives = 100/157 (63%), Gaps = 19/157 (12%)
Query: 10 RNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL--------- 60
++ K++VLGDSGVGKT+L+ ++V KF+ Q+K+TIG DF K + ++ KL
Sbjct: 19 KDYYKILVLGDSGVGKTALIQRFVNEKFNSQFKSTIGVDFHHKPVLLEGKLAQAGQLAGL 78
Query: 61 -------VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQ 113
V +QIWDTAGQERFQSLG +YRGADCC LV+D+N +FE + +WR+ FL
Sbjct: 79 KTGVGNEVVMQIWDTAGQERFQSLGYGYYRGADCCALVFDLNDPDSFERVAHWRDIFLNY 138
Query: 114 ADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWC 150
+DP + PF+L+GNK D + V KA +WC
Sbjct: 139 SDPVDPYTFPFILIGNKSDL---PQKKVQHIKAQQWC 172
>gi|328773631|gb|EGF83668.1| hypothetical protein BATDEDRAFT_85182 [Batrachochytrium
dendrobatidis JAM81]
Length = 213
Score = 145 bits (367), Expect = 8e-33, Method: Compositional matrix adjust.
Identities = 81/198 (40%), Positives = 126/198 (63%), Gaps = 16/198 (8%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+Q K+TIG +F T+ ++ D K + QIWDTAGQ
Sbjct: 9 LFKVVLIGDSGVGKSNLLSRFARNEFNQDSKSTIGVEFATRSIEFDGKTIKSQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD++ QKTFES++ W +E AD + +L+GNK
Sbjct: 69 ERYRAITSAYYRGAVGALLVYDISQQKTFESVERWLKELRDHADA----SIVIMLVGNK- 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF--------LCVAEIALKN 183
+D S R VP ++A E+ A R + + ETSA + N++ AF V+ A++N
Sbjct: 124 -SDLKSLRAVPTEEAKEF-ATRNQLLFMETSALDGGNVETAFQDILANVYKVVSNKAMEN 181
Query: 184 EHKDIYYQP-QGISETVS 200
E + P G S TV+
Sbjct: 182 ESNRVATGPGAGKSITVA 199
>gi|443713143|gb|ELU06149.1| hypothetical protein CAPTEDRAFT_64412, partial [Capitella teleta]
Length = 190
Score = 145 bits (366), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 105/171 (61%), Gaps = 2/171 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
KR +L KV+V+G+ G GKTS++ +YV+ FSQ Y+ATIG DF K + D D L+ LQ+W
Sbjct: 18 KREHLYKVLVIGELGTGKTSIIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLW 77
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D AGQERF ++ +Y+ A C +V+DV TF+++Q W+ + + + P VL
Sbjct: 78 DIAGQERFGNMTRVYYKEAVGCFIVFDVTRTSTFDAVQKWKNDLDSKVQLADGSPIPCVL 137
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
L NK D V Q + E+C RG I +FETSAKE+ NIDE+ C+
Sbjct: 138 LANKCD-QSKEGMVTSQTQMEEFCRERGFITWFETSAKENINIDESARCLV 187
>gi|125985004|ref|XP_001356266.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|195164658|ref|XP_002023163.1| GL21209 [Drosophila persimilis]
gi|54644588|gb|EAL33329.1| GA22174 [Drosophila pseudoobscura pseudoobscura]
gi|194105248|gb|EDW27291.1| GL21209 [Drosophila persimilis]
Length = 259
Score = 145 bits (365), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 121/197 (61%), Gaps = 24/197 (12%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGEQYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + L WR EFL AD E + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLRGLGLWRNEFLTYADV-EADKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKAL------EWCAYRGNIPYFETSAKEDCNIDEAFL------- 174
GNK D ++PQK+ + +WCA + + + ETS+K N+ +AF+
Sbjct: 127 GNKND-------ILPQKRQVSYESVQQWCAEQKIVSHIETSSKAATNVSDAFVLGLRQWK 179
Query: 175 ---CVAEIALKNEHKDI 188
CVAE L++ I
Sbjct: 180 HMECVAEAELRHNGDTI 196
>gi|440798204|gb|ELR19272.1| GTPbinding protein [Acanthamoeba castellanii str. Neff]
Length = 184
Score = 144 bits (364), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/185 (42%), Positives = 118/185 (63%), Gaps = 12/185 (6%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+KV+++GD GVGKT+L+ ++V+NKF ++ +TIGA FVTK+L D L+ L++WDTAGQE
Sbjct: 10 VKVVIVGDCGVGKTALVQRFVFNKF-DKHDSTIGAAFVTKDLLADGVLIKLEMWDTAGQE 68
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
R++SL ++RGAD C++VYDV ++F L+ W EF A A P V++GNK+D
Sbjct: 69 RYRSLSPLYFRGADACLMVYDVTSSQSFADLEGWFSEFRSMAGA----AVPMVVVGNKMD 124
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ 191
++R V + A EW ++ + +F SAK++ +DE F AE+A + H D Q
Sbjct: 125 LQ--TTRQVNARDAEEW-SHGADCAHFVASAKDNTGVDEVF---AELARRAAHDYDASTQ 178
Query: 192 PQGIS 196
G S
Sbjct: 179 GNGCS 183
>gi|195049918|ref|XP_001992789.1| GH13450 [Drosophila grimshawi]
gi|193899848|gb|EDV98714.1| GH13450 [Drosophila grimshawi]
Length = 266
Score = 144 bits (363), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 78/198 (39%), Positives = 121/198 (61%), Gaps = 15/198 (7%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKVI+LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVIILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMDKDIAVDGEKYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + L+ WR EFL AD E + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEFLNYADV-EPDRFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D R V + +WC +G + ETS+K N+ +AF+ +AL+ K
Sbjct: 127 GNKNDIR-AEKRQVSSEDVQKWCTEQGISAHIETSSKAATNVTDAFV----LALRQWKK- 180
Query: 188 IYYQPQGISETVSEVEQR 205
E ++E EQR
Sbjct: 181 --------MECIAEAEQR 190
>gi|158298801|ref|XP_318959.3| AGAP009846-PA [Anopheles gambiae str. PEST]
gi|157014060|gb|EAA14215.3| AGAP009846-PA [Anopheles gambiae str. PEST]
Length = 233
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 73/162 (45%), Positives = 103/162 (63%), Gaps = 2/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD VGK+ LMN++V N F TIG +F+ K++Q+D + TLQIWDTAGQ
Sbjct: 12 LLKVVILGDGNVGKSCLMNRFVSNYFDANSFHTIGVEFLNKDIQVDQERFTLQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF++L + FYRG D C+L Y +N + +F +L +WR+EFL+ D + PFV++G K
Sbjct: 72 ERFRALRTPFYRGTDICLLTYAINDRLSFRALVSWRDEFLRYYDVNP-DHFPFVVVGTKN 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++ +WC Y ETSAK N+ AF
Sbjct: 131 DL-PPAQREVTAEEVSQWCQEHHITAYIETSAKTSENVATAF 171
>gi|403334463|gb|EJY66390.1| Ras-related protein RABG3f [Oxytricha trifallax]
Length = 232
Score = 144 bits (362), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 71/166 (42%), Positives = 106/166 (63%), Gaps = 4/166 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
++ LKVI++GDSGVGKTSL+ + Y K S+ K TIGA+F +++++ K V LQIWD
Sbjct: 2 QKGFLKVIIIGDSGVGKTSLLEAFNYKKISKSAKPTIGAEFTKRKVKLQSGKEVNLQIWD 61
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSL ++FYRG DCC+LV+D+ +++E+L NWR F + +++ P +L+
Sbjct: 62 TAGQERFQSLCTSFYRGTDCCILVFDLTSSESYENLNNWRSLFQQTTGDDQNQEIPIILV 121
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
GNK D S + + +W + Y E SA + N+D+ F
Sbjct: 122 GNKCDR---SKNIDAETIKKDWISNEKCKEYIEASALKLDNVDQIF 164
>gi|384484908|gb|EIE77088.1| rab11 protein [Rhizopus delemar RA 99-880]
Length = 211
Score = 143 bits (361), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 78/210 (37%), Positives = 130/210 (61%), Gaps = 22/210 (10%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGKT+L++++ N+F+ + K+TIG +F T+ +Q+D K++ QIWDTAGQ
Sbjct: 10 LFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSIQVDQKMIKAQIWDTAGQ 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD++ T+ES++ W +E AD +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDISKHSTYESVERWLKELRDHADSN----IVIMLVGNK- 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF--------LCVAEIALKN 183
+D R VP +A ++ + G + + ETSA + N+D++F V+ AL++
Sbjct: 125 -SDLRHLRAVPTDEAKQFASDNG-LSFIETSALDATNVDQSFQQILTEIYRIVSNKALES 182
Query: 184 EHKDIYYQPQG-----ISETVSEVEQRGGC 208
+ I +P +S+T E ++GGC
Sbjct: 183 SNNTI--KPTSGQTILVSQTPDEQTKQGGC 210
>gi|156390266|ref|XP_001635192.1| predicted protein [Nematostella vectensis]
gi|156222283|gb|EDO43129.1| predicted protein [Nematostella vectensis]
Length = 204
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 72/172 (41%), Positives = 111/172 (64%), Gaps = 7/172 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++V + + Y+ TIG DF K +++D K+V LQIWDTAGQ
Sbjct: 16 LFKILLIGDSGVGKSCLLLRFVDDSHRESYQTTIGVDFKIKTMRVDGKVVKLQIWDTAGQ 75
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYD+ ++++ +L W E A G H +L+GNKI
Sbjct: 76 ERFRTITSSYYRGAHGVMIVYDITKRESYNNLHKWLMEVETYASEGVH----MILVGNKI 131
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
D D + R V A EW A ++P+ ETSAK N+ EAFL ++ + K+
Sbjct: 132 DLD--TDREVQPDAAQEWAALH-DMPFVETSAKGAKNVKEAFLVLSRLLTKH 180
>gi|66811460|ref|XP_639910.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74897037|sp|Q54P07.1|RB32D_DICDI RecName: Full=Ras-related protein Rab-32D
gi|60466945|gb|EAL64989.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 228
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 117/182 (64%), Gaps = 5/182 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+NM LK+I++GD VGKTS++++ +++KF+++YK+TIGADF++K +D + +Q
Sbjct: 2 INMTETKQLKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQ 61
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEF-LKQADP-GEHEAC 122
+WDTAGQE++ L SAF+R +D +LV+D++ + +F +L W ++F K +P G +
Sbjct: 62 LWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQL 121
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
P +LL NK D+ +R V Q + +WC Y+E SAK NI E+ L + E+ ++
Sbjct: 122 PILLLANKSDS---LTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIE 178
Query: 183 NE 184
+
Sbjct: 179 QD 180
>gi|167391375|ref|XP_001739748.1| GTP-binding protein ypt7 [Entamoeba dispar SAW760]
gi|165896450|gb|EDR23858.1| GTP-binding protein ypt7, putative [Entamoeba dispar SAW760]
Length = 190
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 112/176 (63%), Gaps = 7/176 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LK+I++G+SGVGKTSL+ +YV NKF YK TIG DF+ K + +++K LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFDSTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
E+F S+ S+FYRG+D ++V+DV +F ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWINEYSRALNGKD---VPIIICGNKV 117
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
D R+V + A +WC R N Y ETSA +++ F+ V ++ ++N+ +D
Sbjct: 118 DCQ---PRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEED 169
>gi|351694505|gb|EHA97423.1| Ras-related protein Rab-9A [Heterocephalus glaber]
Length = 178
Score = 143 bits (360), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 69/145 (47%), Positives = 100/145 (68%), Gaps = 3/145 (2%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MN+ NKF Q TIG +F+ K+L++D VT+QIWDTAGQERF+SL + FYR +DCC
Sbjct: 1 MNRCGTNKFHAQLFHTIGVEFLNKDLEVDGHFVTMQIWDTAGQERFRSLRTPFYRVSDCC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
+L + V+ ++F++L+NW++EF+ AD E ++ PFV+LGNK++ S R V ++A
Sbjct: 61 LLTFSVDDSQSFQNLRNWKKEFIYYADMKEPKSFPFVILGNKVNI---SERQVSTEEAQA 117
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAF 173
W G+ PYFETSAK+ N+ AF
Sbjct: 118 WFRDNGDHPYFETSAKDATNVAAAF 142
>gi|195436618|ref|XP_002066254.1| GK18197 [Drosophila willistoni]
gi|194162339|gb|EDW77240.1| GK18197 [Drosophila willistoni]
Length = 261
Score = 143 bits (360), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 74/190 (38%), Positives = 117/190 (61%), Gaps = 12/190 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+N++V N++ + TIG +F+ K++ +D++ TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLNRFVSNRYEENNFHTIGVEFMNKDIIVDNEKYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLQGLGMWRNEFLNYADV-KPDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R + + +WC + ETS+K N+ EAF CVA
Sbjct: 127 GNKNDLQ-PQQRQINSDEVKQWCKELNISTHIETSSKTATNVTEAFTLALRQWKHMECVA 185
Query: 178 EIALKNEHKD 187
E L+ ++ D
Sbjct: 186 EAELRQQNGD 195
>gi|123410263|ref|XP_001303658.1| guanine nucleotide regulatory protein [Trichomonas vaginalis G3]
gi|67944367|gb|AAY83819.1| small Rab GTPase Rab11b [Trichomonas vaginalis]
gi|72536126|gb|AAZ73171.1| small Rab GTPase Rab11 [Trichomonas vaginalis]
gi|121885054|gb|EAX90728.1| guanine nucleotide regulatory protein, putative [Trichomonas
vaginalis G3]
Length = 211
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 82/209 (39%), Positives = 128/209 (61%), Gaps = 19/209 (9%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLK++++GDSGVGKT+L+ ++ ++F+ + K+TIG +F +K +Q++ K + QIWDTAGQ
Sbjct: 9 LLKIVLIGDSGVGKTNLLARFTRDQFNPESKSTIGVEFASKTMQIEGKTIKAQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +L+YD+ TF SL+ W +E + AD E +L+GNK
Sbjct: 69 ERYRAITSAYYRGAIGALLLYDITASLTFNSLEKWLKELRENAD----EKIIVMLVGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF-LCVAEIALK-------- 182
D R V ALE+ A N+ + ETSA+E N++EAF + EI K
Sbjct: 125 DL--SEQRAVTSANALEF-AKAQNLLFIETSAREATNVNEAFQTLICEIVNKLNKQNVAA 181
Query: 183 NEHKDIYYQP-QGISETVSEV--EQRGGC 208
E ++ P QG+S T ++ E++ GC
Sbjct: 182 EEKANVQETPRQGVSITATKSPEEKKKGC 210
>gi|67467937|ref|XP_650041.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56466592|gb|EAL44655.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|56790084|dbj|BAD82838.1| small GTPase EhRabX2 [Entamoeba histolytica]
gi|449706292|gb|EMD46168.1| small GTPase EhRabX2, putative [Entamoeba histolytica KU27]
Length = 204
Score = 142 bits (359), Expect = 6e-32, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R LK+IVLGDS VGKTSL+NQ+V K+S +YK+TIG D TK + + D+LV+LQIW
Sbjct: 1 MTERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D +G ERF+ + +F+RG D CVLV V ++F S ++W + + PFV
Sbjct: 61 DPSGTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMSDIINHIGYN----VPFVA 116
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+ NK D D +V + WC + NIP F SAK+ N++ AF+ ++E L N
Sbjct: 117 VANKSDLDPIEWQVTSNRLD-TWCK-KKNIPSFFVSAKDASNVENAFIRLSEDVLIN 171
>gi|291397906|ref|XP_002715524.1| PREDICTED: RAB13, member RAS oncogene family [Oryctolagus
cuniculus]
Length = 203
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 116/174 (66%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDSFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF C+A +I LK+
Sbjct: 123 CDME--AKRKVRKEQATKLAQEHG-IRFFETSAKSSVNVDEAFSCLARDILLKS 173
>gi|440297613|gb|ELP90270.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 193
Score = 142 bits (359), Expect = 7e-32, Method: Compositional matrix adjust.
Identities = 73/181 (40%), Positives = 108/181 (59%), Gaps = 8/181 (4%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
MK + K+I++G+SGVGKTSL+N+YV N F YK+TIG DF++K +Q + LQIW
Sbjct: 1 MKPVQMFKIILIGESGVGKTSLINRYVENSFDPVYKSTIGCDFLSKNVQYEGVEYVLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAG E+F S+ S+FYRG+D +V+DV +F +L +W EF + P ++
Sbjct: 61 DTAGHEKFSSMISSFYRGSDGAFVVFDVTDTASFSNLDSWINEFSGSI----NNDVPIIV 116
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
GNK D + +R VP A +WC R N Y E+SAK + + F + ++ + N+
Sbjct: 117 CGNKTDLE---NRCVPTASAQQWCDLR-NYTYVESSAKSSAGVTDMFATIVKLIVDNKKG 172
Query: 187 D 187
D
Sbjct: 173 D 173
>gi|348519068|ref|XP_003447053.1| PREDICTED: ras-related protein Rab-38-like [Oreochromis niloticus]
Length = 207
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 79/208 (37%), Positives = 124/208 (59%), Gaps = 11/208 (5%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQI 65
M++ L KV+V+GD GVGKTS++ +YV+ FSQ Y+ATIG DF K LQ D + ++ LQ+
Sbjct: 1 MQQELLFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFALKVLQWDSNTVIRLQL 60
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WD AGQER+ ++ +YR A ++V+DV TF+++ W+++ + P V
Sbjct: 61 WDIAGQERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLNHGRPVPAV 120
Query: 126 LLGNKIDTDGGSSRVVPQKKALE-WCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
LL NK D ++V Q+ L+ +C G + +FETSAKE+ NI+EA C+ E L+NE
Sbjct: 121 LLANKSD------QLVSQQPKLDAFCRENGFVGWFETSAKENTNIEEAARCLVEHILRNE 174
Query: 185 HKDIYYQPQG---ISETVSEVEQRGGCA 209
+ + G +S + ++ GC+
Sbjct: 175 ESLVTEREPGSLILSGCTTTSKEHLGCS 202
>gi|348526868|ref|XP_003450941.1| PREDICTED: ras-related protein Rab-13-like [Oreochromis niloticus]
Length = 200
Score = 142 bits (358), Expect = 8e-32, Method: Compositional matrix adjust.
Identities = 76/175 (43%), Positives = 112/175 (64%), Gaps = 7/175 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF K +++D K V LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VSRMLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
D + + R V K+ E A I +FETSAK N++E+FL +A LK K
Sbjct: 124 DIE--AKRKVS-KETGEKLAKDHGIRFFETSAKSSINVEESFLALARDILKQSSK 175
>gi|407034621|gb|EKE37306.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 204
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/177 (42%), Positives = 107/177 (60%), Gaps = 6/177 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R LK+IVLGDS VGKTSL+NQ+V K+S +YK+TIG D TK + + D+LV+LQIW
Sbjct: 1 MTERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKVISIKDQLVSLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D +G ERF+ + +F+RG D CVLV V ++F S ++W + + PFV
Sbjct: 61 DPSGTERFRCISESFFRGTDGCVLVCSVTSIESFNSFESWMTDIINHIGYN----VPFVA 116
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+ NK D D ++ + WC + NIP F SAK+ N++ AF+ ++E L N
Sbjct: 117 VANKSDLDPIEWQITSNRLD-TWCK-KKNIPSFFVSAKDASNVENAFIRLSEDVLIN 171
>gi|325180634|emb|CCA15039.1| Rab1 family GTPase putative [Albugo laibachii Nc14]
Length = 202
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 83/204 (40%), Positives = 128/204 (62%), Gaps = 13/204 (6%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+ L+ ++ + F++ Y TIG DF + +++D K + LQIWDTAG
Sbjct: 7 HLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVRIDKKTIKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ SA+YRGAD ++VYDV Q++F+ + +W E + A G C +L+GNK
Sbjct: 67 QERFRTITSAYYRGADGIIMVYDVTNQESFDHVNDWLNEVNRYASEG---TCK-LLVGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
+D SR V + A + A +IP+ ETSAK N++EAFL +A E+ E
Sbjct: 123 --SDITESRAVTYETAKAF-ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMLGDA 179
Query: 190 YQPQGISETVSEVEQR---GGCAC 210
+P+G S +SE +R G C+C
Sbjct: 180 NRPRGTS--LSEEARRNNNGNCSC 201
>gi|67482255|ref|XP_656477.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|50978614|dbj|BAD34974.1| EhRab7G protein [Entamoeba histolytica]
gi|56473678|gb|EAL51093.1| Rab family GTPase [Entamoeba histolytica HM-1:IMSS]
gi|449708325|gb|EMD47807.1| Rab family gtpase [Entamoeba histolytica KU27]
Length = 190
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LK+I++G+SGVGKTSL+ +YV NKF YK TIG DF+ K + +++K LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKTTIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
E+F S+ S+FYRG+D ++V+DV +F ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEYSRALNGKD---VPIIICGNKV 117
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
D R+V + A +WC R N Y ETSA +++ F+ V ++ ++N+ D
Sbjct: 118 DC---QPRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEDD 169
>gi|195115182|ref|XP_002002143.1| GI14033 [Drosophila mojavensis]
gi|193912718|gb|EDW11585.1| GI14033 [Drosophila mojavensis]
Length = 264
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 76/194 (39%), Positives = 118/194 (60%), Gaps = 15/194 (7%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWDTAGQ
Sbjct: 12 LLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIAVDGEKYTLQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF++L + FYRG+D C+L Y ++ + + L+ WR EF+ AD + + PF+++GNK
Sbjct: 72 ERFRALRTPFYRGSDMCLLCYALDDRDSLRGLRLWRNEFINYADV-QPDRFPFIVVGNKN 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D R V + +WCA G + ETS+K N+ +AF+ +AL+
Sbjct: 131 DIR-AERRQVSYEDVQQWCAEHGISAHIETSSKTATNVTDAFV----LALRQWK------ 179
Query: 192 PQGISETVSEVEQR 205
E V+E EQR
Sbjct: 180 ---AMERVAEAEQR 190
>gi|15230422|ref|NP_187823.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
gi|297834018|ref|XP_002884891.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|75334990|sp|Q9LH50.1|RAA4D_ARATH RecName: Full=Ras-related protein RABA4d; Short=AtRABA4d
gi|12322042|gb|AAG51065.1|AC069472_5 ras-related GTP-binding protein; 5118-4176 [Arabidopsis thaliana]
gi|9294115|dbj|BAB01966.1| GTP-binding protein-like [Arabidopsis thaliana]
gi|67633628|gb|AAY78738.1| Ras-related GTP-binding family protein [Arabidopsis thaliana]
gi|297330731|gb|EFH61150.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|332641639|gb|AEE75160.1| RAB GTPase-like protein A4D [Arabidopsis thaliana]
Length = 222
Score = 142 bits (357), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 125 LIGNKCDL--GSLRAVPTEDAQEF-AQRENLFFMETSALEATNVETAFLTI 172
>gi|301123057|ref|XP_002909255.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
gi|262100017|gb|EEY58069.1| Rab1 family GTPase, putative [Phytophthora infestans T30-4]
Length = 203
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 80/203 (39%), Positives = 126/203 (62%), Gaps = 10/203 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+ L+ ++ + F++ Y TIG DF + +++D+K V LQIWDTAG
Sbjct: 7 HLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ SA+YRGAD ++VYDV Q++F+ + +W E + A G C +L+GNK
Sbjct: 67 QERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEG---TCK-LLVGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
+D ++VV + A + A +IP+ ETSAK N++EAFL +A E+ E
Sbjct: 123 --SDISDNKVVSYETAKAF-ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGES 179
Query: 190 YQPQG--ISETVSEVEQRGGCAC 210
+P G ++E GC+C
Sbjct: 180 SRPTGTKLTENTKSGGNSNGCSC 202
>gi|19921534|ref|NP_609966.1| Rab9 [Drosophila melanogaster]
gi|7298580|gb|AAF53798.1| Rab9 [Drosophila melanogaster]
gi|17945413|gb|AAL48761.1| RE17845p [Drosophila melanogaster]
gi|220948020|gb|ACL86553.1| Rab9-PA [synthetic construct]
gi|220960432|gb|ACL92752.1| Rab9-PA [synthetic construct]
Length = 256
Score = 141 bits (356), Expect = 1e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 117/190 (61%), Gaps = 13/190 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIP-AQKRQVSSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKD 187
E L+ +H D
Sbjct: 186 EAELR-QHGD 194
>gi|298712336|emb|CBJ33128.1| Rab1A, RAB family GTPase [Ectocarpus siliculosus]
Length = 202
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 72/167 (43%), Positives = 110/167 (65%), Gaps = 8/167 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+ L+ ++ + F+ Y +TIG DF + +++D K V LQIWDTAG
Sbjct: 8 HLFKLVLIGDSGVGKSCLLLRFADDAFTDSYISTIGVDFRFRTVKIDKKTVKLQIWDTAG 67
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ SA+YRGAD ++VYDV Q++F+ + +W E + A G + +L+GNK
Sbjct: 68 QERFRTITSAYYRGADGIIMVYDVTGQESFDHVNDWLSEVNRYASEGTSK----LLIGNK 123
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ G IP+ ETSAK N++EAFL +A
Sbjct: 124 SDRE---DKVVDSAAAKEYAESLG-IPFLETSAKNASNVEEAFLTMA 166
>gi|390603704|gb|EIN13095.1| ras-domain-containing protein [Punctularia strigosozonata HHB-11173
SS5]
Length = 443
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/125 (54%), Positives = 89/125 (71%), Gaps = 5/125 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKEL---QMDDKLVTLQIWDTA 69
+K++V+GDSGVGKTSL QY+ +FS Y+ATIGADF+ K + + D+ VTLQIWDTA
Sbjct: 4 IKLVVVGDSGVGKTSLRGQYISGRFSTGYRATIGADFIAKTVPHPHIPDESVTLQIWDTA 63
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLL 127
GQERF SL SAF+RGAD +L++DVN T SL W +EF +A + EA F V++
Sbjct: 64 GQERFSSLSSAFFRGADAVLLIFDVNKPSTLTSLTRWWDEFRAKAPVPDEEAADFCCVVV 123
Query: 128 GNKID 132
GNK+D
Sbjct: 124 GNKMD 128
>gi|407036472|gb|EKE38178.1| Rab family GTPase [Entamoeba nuttalli P19]
Length = 190
Score = 141 bits (356), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/176 (39%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LK+I++G+SGVGKTSL+ +YV NKF YK TIG DF+ K + +++K LQIWDTAG
Sbjct: 1 MLKLILIGESGVGKTSLIQRYVMNKFEPTYKITIGCDFLAKTVYVENKEYNLQIWDTAGH 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
E+F S+ S+FYRG+D ++V+DV +F ++ W E+ + + + P ++ GNK+
Sbjct: 61 EKFSSMVSSFYRGSDGAIIVFDVTNTSSFTAIDTWISEYSRALNGKD---VPIIICGNKV 117
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
D R+V + A +WC R N Y ETSA +++ F+ V ++ ++N+ D
Sbjct: 118 DC---QPRLVSTESARQWCEGR-NYSYIETSAATAQGVNDLFMEVVKVIIENKEDD 169
>gi|195345093|ref|XP_002039110.1| GM17348 [Drosophila sechellia]
gi|194134240|gb|EDW55756.1| GM17348 [Drosophila sechellia]
Length = 255
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 17/212 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVIDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIP-AQKRQVNSDAVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKDIYYQPQGISETVSEVEQRGGCA 209
E L+ +H D ++ + V++R C
Sbjct: 186 EAELR-QHGDTI----DLTRPIRLVQRRICCT 212
>gi|348675760|gb|EGZ15578.1| hypothetical protein PHYSODRAFT_354794 [Phytophthora sojae]
Length = 203
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 79/203 (38%), Positives = 121/203 (59%), Gaps = 10/203 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+ L+ ++ + F++ Y TIG DF + +++D+K V LQIWDTAG
Sbjct: 7 HLFKLVLIGDSGVGKSCLLLRFADDAFTESYITTIGVDFRFRTVKIDNKTVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ SA+YRGAD ++VYDV Q++F+ + +W E + A G C +L+GNK
Sbjct: 67 QERFRTITSAYYRGADGIIMVYDVTSQESFDHVNDWLNEVNRYASEG---TCK-LLVGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
D + KA A +IP+ ETSAK N++EAFL +A E+ E
Sbjct: 123 SDISDNKAVSYETAKAF---ADSLSIPFLETSAKNAQNVEEAFLTMASELITIREMVGDS 179
Query: 190 YQPQG--ISETVSEVEQRGGCAC 210
+P G ++E GC+C
Sbjct: 180 NRPAGTKLTENTKSGGNSNGCSC 202
>gi|255636322|gb|ACU18500.1| unknown [Glycine max]
Length = 209
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 10 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 69
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+++ W EE AD +
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHADKN----IVVM 125
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D G+ R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 126 LIGNKCDL--GTLRAVPTEDAEEF-AQRENLFFMETSALESTNVETAFLTI 173
>gi|195484453|ref|XP_002090701.1| GE13254 [Drosophila yakuba]
gi|194176802|gb|EDW90413.1| GE13254 [Drosophila yakuba]
Length = 260
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 117/190 (61%), Gaps = 13/190 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIP-AQKRQVNSDAVQQWCAEQKVTCHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKD 187
E L+ +H D
Sbjct: 186 EAELR-QHGD 194
>gi|194879572|ref|XP_001974257.1| GG21181 [Drosophila erecta]
gi|190657444|gb|EDV54657.1| GG21181 [Drosophila erecta]
Length = 255
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/212 (36%), Positives = 125/212 (58%), Gaps = 17/212 (8%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVSNRYEENNFHTIGVEFMNKDIVVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGLWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIP-AQKRQVNSDAVQQWCAEQKVTCHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKDIYYQPQGISETVSEVEQRGGCA 209
E L+ +H D ++ + V++R C
Sbjct: 186 EAELR-QHGDTI----DLTRPIRLVQRRICCT 212
>gi|357157821|ref|XP_003577924.1| PREDICTED: ras-related protein RGP1-like isoform 2 [Brachypodium
distachyon]
Length = 227
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/179 (41%), Positives = 113/179 (63%), Gaps = 13/179 (7%)
Query: 1 MDISVNMKRRN------LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKEL 54
MD S + R+ + KV+++GDS VGK+ L+ ++ N+FS KATIG +F T+ L
Sbjct: 1 MDTSATTQARSPKRIDYVFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTL 60
Query: 55 QMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQA 114
Q+D + + QIWDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE A
Sbjct: 61 QVDQRTIKAQIWDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHA 120
Query: 115 DPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D +L+GNK +D G+ RVVP + A E+ A R ++ + ETSA E N++ AF
Sbjct: 121 DKN----LVIMLIGNK--SDLGTLRVVPTEDAKEFAA-RESLFFMETSALEATNVENAF 172
>gi|195580161|ref|XP_002079924.1| GD24206 [Drosophila simulans]
gi|194191933|gb|EDX05509.1| GD24206 [Drosophila simulans]
Length = 255
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 75/190 (39%), Positives = 117/190 (61%), Gaps = 13/190 (6%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
++ LLKV++LGD GVGK++L+ ++V N++ + TIG +F+ K++ +D + TLQIWD
Sbjct: 8 QKSKLLKVVILGDGGVGKSALLTRFVANRYEENNFHTIGVEFMNKDIVVDGERYTLQIWD 67
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF++L + FYRG+D C+L Y ++ + + + L WR EFL AD + + PF+++
Sbjct: 68 TAGQERFRALRTPFYRGSDICLLCYALDDRDSLKGLGVWRNEFLNYADV-DQDKFPFIVV 126
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL----------CVA 177
GNK D R V +WCA + + ETS+K N+ +AF+ CVA
Sbjct: 127 GNKNDIP-AQKRQVNSDTVQQWCAEQKVACHIETSSKAATNVTDAFVLGLRQWRHMECVA 185
Query: 178 EIALKNEHKD 187
E L+ +H D
Sbjct: 186 EAELR-QHGD 194
>gi|29789271|ref|NP_112354.1| ras-related protein Rab-13 [Rattus norvegicus]
gi|46577668|sp|P35286.2|RAB13_RAT RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|21952483|gb|AAM82588.1|AF525280_1 GTP-binding protein RAB13 [Rattus norvegicus]
gi|149048004|gb|EDM00580.1| RAB13, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
Length = 203
Score = 141 bits (355), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRKVQREQA-ERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|298712050|emb|CBJ32986.1| Rab8A, RAB family GTPase [Ectocarpus siliculosus]
Length = 205
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 110/166 (66%), Gaps = 7/166 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++++GDSGVGKT L+ +Y + FSQ + TIG DF K + +D K + LQIWDTAGQE
Sbjct: 12 IKLLMIGDSGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQE 71
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+++ ++++RGA +LVYDV +K+F S++NW + + AD ++ +L+GNK D
Sbjct: 72 RFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADVAVNK----ILIGNKCD 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D R V +++ + A G I +FETSAK D N+++ F+ +A
Sbjct: 128 MD--EDREVSREEGAQLAAEYG-IQFFETSAKNDINVEKGFITIAR 170
>gi|410905643|ref|XP_003966301.1| PREDICTED: ras-related protein Rab-13-like [Takifugu rubripes]
Length = 200
Score = 140 bits (354), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 78/199 (39%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF K + +D K V LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIDVDGKKVKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VSRMLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + + R V K+ E A I +FETSAK N++E+FL +A L+ K
Sbjct: 124 DIE--AKRKVS-KETGEKLAKDHGIRFFETSAKSSINVEESFLSLAHDILQKSSKK--QG 178
Query: 192 PQGISETVSEVEQRGGCAC 210
P G ++ ++ C
Sbjct: 179 PTGREVKITSSTEKKSSKC 197
>gi|449463769|ref|XP_004149604.1| PREDICTED: ras-related protein RABA4c-like [Cucumis sativus]
Length = 222
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 7/168 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L++++ N+FS KATIG +F TK L +D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ ++TF+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
L+GNK +D GS RVVP + A E+ A N+ + ETSA E N++ AF
Sbjct: 125 LIGNK--SDLGSLRVVPTEDAKEF-AQMENLSFMETSALEATNVEAAF 169
>gi|449530588|ref|XP_004172276.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein RABA4c-like
[Cucumis sativus]
Length = 222
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 75/168 (44%), Positives = 108/168 (64%), Gaps = 7/168 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L++++ N+FS KATIG +F TK L +D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLSRFARNEFSLDSKATIGVEFQTKTLNIDQKAIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ ++TF+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQTFDHIARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
L+GNK +D GS RVVP + A E+ A N+ + ETSA E N++ AF
Sbjct: 125 LIGNK--SDLGSLRVVPTEDAKEF-AQMENLSFMETSALEATNVEAAF 169
>gi|351722131|ref|NP_001238001.1| uncharacterized protein LOC100527312 [Glycine max]
gi|255632063|gb|ACU16384.1| unknown [Glycine max]
Length = 214
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 107/163 (65%), Gaps = 7/163 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ K++++GDSGVGK+ L+N++V N+F + K TIG +F+T+ + MD KLV QIWDTAGQ
Sbjct: 1 MFKIVMVGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +A+YRGA C +L YD+ Q+TF+ ++ W +E D +L+GNK
Sbjct: 61 ERYQAITTAYYRGATCALLAYDITKQQTFDHVEKWLDELRIHTDKN----ILVMLVGNK- 115
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+D S R VP + A ++ G + + ETSA + N++ AF+
Sbjct: 116 -SDLSSLRAVPTEVARDFAQQEG-LFFLETSALDSSNVESAFI 156
>gi|41152205|ref|NP_958486.1| ras-related protein Rab-13 [Danio rerio]
gi|31419201|gb|AAH53195.1| RAB13, member RAS oncogene family [Danio rerio]
Length = 200
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 77/200 (38%), Positives = 122/200 (61%), Gaps = 11/200 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF K ++++ K V LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKVKTIEVEGKKVKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K++E++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSYENIQNWMKSIKENASAG----VSRMLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D + + R V ++ E A I +FETSAK N++E+F +A +I LK+ K
Sbjct: 124 DIE--AKRKVSKETG-EKLAKEHGIRFFETSAKSSINVEESFTSLARDILLKSNKKP--- 177
Query: 191 QPQGISETVSEVEQRGGCAC 210
P G ++ E++ C
Sbjct: 178 GPSGREVKLTSTEKKSSSKC 197
>gi|154550431|gb|ABS83490.1| Rab7 [Haliotis cracherodii]
Length = 100
Score = 140 bits (354), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 65/103 (63%), Positives = 80/103 (77%), Gaps = 3/103 (2%)
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
T+QIWDTAGQERFQSLG AFYRGADCCVLV+DV + TF++L WR+EFL QA P + E
Sbjct: 1 TMQIWDTAGQERFQSLGVAFYRGADCCVLVFDVTMPNTFKNLDGWRDEFLIQASPRDPEH 60
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAK 164
PFV++GNKID + +R V K+A WC+ + +IPYFETSAK
Sbjct: 61 FPFVVIGNKIDLE---NRAVSAKRAQSWCSSKNDIPYFETSAK 100
>gi|345803013|ref|XP_855128.2| PREDICTED: ras-related protein Rab-13 [Canis lupus familiaris]
Length = 293
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 15/184 (8%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 97 HLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAG 156
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 157 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 212
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK------- 182
D + + R V +++A++ G I +FETSAK N+DEAF +A +I LK
Sbjct: 213 CDME--AKRKVQKEQAIKLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKSGGRRSG 269
Query: 183 NEHK 186
N HK
Sbjct: 270 NSHK 273
>gi|387017924|gb|AFJ51080.1| ras-related protein Rab-10-like [Crotalus adamanteus]
Length = 189
Score = 140 bits (353), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|356537347|ref|XP_003537189.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 310
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 95 NQKIDYVFKVVLIGDSAVGKTQLLARFAKNQFSVDSKATIGVEFQTKTLIIDNKTVKAQI 154
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+++ W EE AD + +
Sbjct: 155 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDNMAKWLEELRGHAD----KNIVVM 210
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D G+ R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 211 LIGNKCDL--GTLRAVPTEDAEEF-AQRENLFFMETSALESTNVETAFLTI 258
>gi|167387053|ref|XP_001738005.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165898967|gb|EDR25691.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 204
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 76/177 (42%), Positives = 105/177 (59%), Gaps = 6/177 (3%)
Query: 7 MKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIW 66
M R LK+IVLGDS VGKTSL+NQ+V K+S +YK+TIG D TK + + D+LV+LQIW
Sbjct: 1 MTERITLKIIVLGDSFVGKTSLINQFVNRKYSSEYKSTIGVDLSTKAMSVKDQLVSLQIW 60
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D +G ERF+ + +F+RG D CVLV V ++F S ++W + PFV
Sbjct: 61 DPSGTERFRCISDSFFRGTDGCVLVCSVTSIESFNSFESWMNDITNHIGYN----VPFVA 116
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+ NK D D +V + WC + NIP F SAK+ N++ AF+ + E L N
Sbjct: 117 VANKSDLDPIEWQVTSNRLD-TWCK-KKNIPSFFVSAKDASNVENAFVRLCEDVLIN 171
>gi|291227653|ref|XP_002733795.1| PREDICTED: lightoid-like [Saccoglossus kowalevskii]
Length = 217
Score = 140 bits (353), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 81/212 (38%), Positives = 117/212 (55%), Gaps = 10/212 (4%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
KR +L KV+V+GD G GKTS++ +YV+ FSQ Y+ATIG DF K + D D L+ LQ+W
Sbjct: 7 KREHLYKVLVIGDLGTGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLW 66
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D AGQERF ++ +Y+ A +V+DV TFE++Q W+ + + + P VL
Sbjct: 67 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRASTFEAVQKWKNDLDSKVQLPNGQNIPVVL 126
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE-- 184
L NK D V + ++C +G I +FETSAKE+ NIDEA + L N+
Sbjct: 127 LANKCDQ-AKEGLVNNASQMDDYCKEKGFIGWFETSAKENINIDEAARFLVTAILANDKS 185
Query: 185 --HKDIYYQPQGI----SETVSEVEQRGGCAC 210
H+D + + S + E E + G C
Sbjct: 186 MNHEDQHQDKDALRLDGSGAIEENEGKSGSCC 217
>gi|145476441|ref|XP_001424243.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124391306|emb|CAK56845.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 74/203 (36%), Positives = 121/203 (59%), Gaps = 15/203 (7%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K++++GDSGVGKT++M Q+ +FS++ K T+G +F K+L +DDK++ Q+WDTAGQER
Sbjct: 12 KIVIIGDSGVGKTNIMTQFTRGEFSEETKTTVGVEFANKQLVIDDKIIKAQLWDTAGQER 71
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
++++ S++Y+GA ++V+D+ Q TF+++ W +K+ +L+GNK D
Sbjct: 72 YRAIISSYYKGASGALIVFDITKQSTFDNVDRW----MKEVQESTSNEISIILVGNKSDL 127
Query: 134 DGGSSRVVPQKKALEWCAY--RGNIPYFETSAKEDCNIDEAF-LCVAEIALKNEHKDIYY 190
R + Q + AY + I + ETSAK+ N++EAF + EI KN++ IY
Sbjct: 128 -----RHLRQVSSDVSSAYASKHKIAFLETSAKDGANVNEAFNKLINEIHSKNKNNSIYT 182
Query: 191 QP---QGISETVSEVEQRGGCAC 210
Q Q I+E V Q+ C
Sbjct: 183 QKKTNQQITEAVQIDSQKDSGCC 205
>gi|219116316|ref|XP_002178953.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217409720|gb|EEC49651.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 208
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 75/180 (41%), Positives = 119/180 (66%), Gaps = 10/180 (5%)
Query: 1 MDISVNMKRRN---LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD 57
M S + K+R+ L K++++GDSGVGK+ L+ ++ + F++ Y +TIG DF + +++D
Sbjct: 1 MAPSSSSKQRDYDYLFKLVLIGDSGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKID 60
Query: 58 DKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPG 117
K V LQIWDTAGQERF+++ SA+YRGAD ++V+DV +F+ + +W LK+ +
Sbjct: 61 KKTVKLQIWDTAGQERFRTITSAYYRGADGIIMVFDVTSTDSFDHVNDW----LKEVNRY 116
Query: 118 EHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
E +L+GNK +D + RVV +++A E+ G IP+ ETSAK N++EAFL +A
Sbjct: 117 AAEGTVKLLVGNK--SDRTADRVVTEEQAREFADELG-IPFIETSAKSAKNVEEAFLTMA 173
>gi|356558229|ref|XP_003547410.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 140 bits (352), Expect = 4e-31, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 14/205 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S RVVP K G I +FETSAK D N++E F +A +I + D
Sbjct: 131 DMD-ESKRVVPTSKGQALADEYG-IKFFETSAKTDLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 191 QPQGIS-------ETVSEVEQRGGC 208
+P GI T EV Q+ C
Sbjct: 189 EPAGIKIDNQKDQATAGEVAQKSAC 213
>gi|417408833|gb|JAA50952.1| Putative rab subfamily protein of small gtpase, partial [Desmodus
rotundus]
Length = 228
Score = 140 bits (352), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 123/201 (61%), Gaps = 8/201 (3%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + +D K + LQ+WDTAG
Sbjct: 32 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIDGKKIKLQVWDTAG 91
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 92 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 147
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+ + +
Sbjct: 148 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGRRLG 204
Query: 190 YQPQGISETVSEVEQRGGCAC 210
+ S + E++ C
Sbjct: 205 NGSKPSSTDLKTCEKKNTNKC 225
>gi|225441694|ref|XP_002282798.1| PREDICTED: ras-related protein RABA4d [Vitis vinifera]
gi|147789804|emb|CAN62934.1| hypothetical protein VITISV_008844 [Vitis vinifera]
gi|297739720|emb|CBI29902.3| unnamed protein product [Vitis vinifera]
Length = 223
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L+ ++ N+F+ KATIG +F TK L +D K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFARNEFNVDSKATIGVEFQTKTLAIDQKAVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK +D GS R VP + A E+ A R N+ + ETSA E N++ AFL V
Sbjct: 125 LIGNK--SDLGSLRAVPTEDAQEF-AERENLFFMETSALEATNVETAFLTV 172
>gi|356500461|ref|XP_003519050.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 222
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 85/220 (38%), Positives = 125/220 (56%), Gaps = 24/220 (10%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+F+ KATIG +F TK L +D K V QI
Sbjct: 9 NHKIDYVFKVVLVGDSAVGKTQLLARFAKNQFNVDSKATIGVEFQTKTLIIDKKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYDV + +F+++ W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDVTRRPSFDNMAKWLEELRGHADKN----IVVM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE-----IA 180
L+GNK D G+ R VP + A E+ A R N+ + ETSA E N++ AFL + ++
Sbjct: 125 LIGNKCDL--GTLRAVPTEDAEEF-AQRENLFFMETSALESTNVETAFLTILTEIYRLVS 181
Query: 181 LKNEHKDIYYQPQGI------------SETVSEVEQRGGC 208
K + P GI S+ ++ E++GGC
Sbjct: 182 KKTLTANDDADPSGISGLLKGTKIIVPSQDINAGEKKGGC 221
>gi|320169952|gb|EFW46851.1| Rab8a protein [Capsaspora owczarzaki ATCC 30864]
Length = 214
Score = 139 bits (351), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 111/167 (66%), Gaps = 7/167 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCVLFRFSDDAFNATFISTIGIDFKIRTIELDGKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV KTFE+++NW ++ + E ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDVTQDKTFENIKNW----IRNIEQHASEDVEKMILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D D RVV +++ E A N+ +FETSAK + N++EAFL +A
Sbjct: 124 DVD--DKRVVTKERG-EQLAREYNVRFFETSAKANINVEEAFLTIAR 167
>gi|297791923|ref|XP_002863846.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
gi|297309681|gb|EFH40105.1| small molecular weight G-protein 1 [Arabidopsis lyrata subsp.
lyrata]
Length = 223
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L+ ++ N+FS + KATIG +F T+ L++D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDHKTIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK TD G+ R VP + A E+ A R N+ + ETSA + N++ +FL V
Sbjct: 125 LIGNK--TDLGTLRAVPTEDAKEF-AQRENLFFMETSALDSNNVEPSFLTV 172
>gi|388515945|gb|AFK46034.1| unknown [Lotus japonicus]
Length = 227
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 69/163 (42%), Positives = 109/163 (66%), Gaps = 8/163 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDSGVGK+ L+N++V N+F + KATIG +F+TK + MD K+V QIWDTAGQ
Sbjct: 15 MFKVVMVGDSGVGKSQLLNRFVRNEFQMKSKATIGVEFLTKTVVMDHKVVKAQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +A+YRGA +L YD+ +++F+ ++ W +E AD +L+GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITNRQSFDHVEKWLDELRVHADN-----IIVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
D G R VP ++A ++ +G + + ETSA + N++ AFL
Sbjct: 130 DLSSG--RAVPMEEAKDFAKQKG-LFFVETSALDSNNVESAFL 169
>gi|356541333|ref|XP_003539132.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/171 (43%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K++ QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKIIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD + +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVKWLEELRGHAD----QNIVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E A R N+ + ETSA E N++ FL +
Sbjct: 125 LIGNKCDL--GSLRAVPMEDA-EELAQRENLFFMETSALESTNVETCFLTI 172
>gi|332023503|gb|EGI63741.1| Ras-related protein Rab-9A [Acromyrmex echinatior]
Length = 188
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 97/145 (66%), Gaps = 1/145 (0%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
MN++V N F + TIG +F+ K+++++ + TLQIWDTAGQERF++L + FYRG+D C
Sbjct: 1 MNRFVSNHFDEHSFHTIGVEFLNKDIEINGEAYTLQIWDTAGQERFKTLRTPFYRGSDIC 60
Query: 89 VLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALE 148
+L Y V+ + +F +L WR EFLK AD E PF+++GNK+D S + V ++A
Sbjct: 61 LLTYAVDDKTSFRNLALWRSEFLKYADVQEGSTFPFIVVGNKVDV-PESEKQVYMEEAQA 119
Query: 149 WCAYRGNIPYFETSAKEDCNIDEAF 173
WC+ GN P ETSAK+ N++ AF
Sbjct: 120 WCSENGNPPLVETSAKDATNVEAAF 144
>gi|351713910|gb|EHB16829.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + FS + +TIG DF K +++ +K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQEKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LGNIDEHANEDVERMLLGNKF 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +A+ L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANTNIEKAFLTLAQDILR 172
>gi|224139832|ref|XP_002323298.1| predicted protein [Populus trichocarpa]
gi|222867928|gb|EEF05059.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 139 bits (351), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 111/174 (63%), Gaps = 7/174 (4%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+ N K + K++++GDS VGK+ L+ ++ N+F+ KATIG +F TK L M +K V
Sbjct: 5 VDYNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFTVDSKATIGVEFQTKTLAMHNKTVK 64
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
QIWDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD ++
Sbjct: 65 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHAD----KSI 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 121 IIMLIGNKCDL--GSLRAVPAEDAKEF-AQRENLFFMETSALEATNVETAFLTM 171
>gi|119617271|gb|EAW96865.1| hCG24991, isoform CRA_a [Homo sapiens]
gi|119617272|gb|EAW96866.1| hCG24991, isoform CRA_a [Homo sapiens]
Length = 203
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 75/175 (42%), Positives = 116/175 (66%), Gaps = 10/175 (5%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPG-EHEACPFVLLGN 129
QERF+++ +A+YRGA +L YD+ +K+FE++QNW + ++ A G EH +LLGN
Sbjct: 67 QERFKTITTAYYRGAMGIILAYDITDEKSFENIQNWMKSIMENASAGVEH-----LLLGN 121
Query: 130 KIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
K D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 122 KCDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|301774282|ref|XP_002922543.1| PREDICTED: ras-related protein Rab-13-like [Ailuropoda melanoleuca]
gi|281350220|gb|EFB25804.1| hypothetical protein PANDA_011544 [Ailuropoda melanoleuca]
Length = 203
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 76/184 (41%), Positives = 118/184 (64%), Gaps = 15/184 (8%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDSFNNTYISTIGIDFKIRTVDVEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK------- 182
D + + R V +++A++ G I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRKVQKEQAVKLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKSGGRRSG 179
Query: 183 NEHK 186
N HK
Sbjct: 180 NSHK 183
>gi|224055257|ref|XP_002298447.1| predicted protein [Populus trichocarpa]
gi|222845705|gb|EEE83252.1| predicted protein [Populus trichocarpa]
Length = 225
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + K++++GDS VGK+ L+ ++ N+FS KATIG +F TK L +D K V QI
Sbjct: 10 NQKIDYVFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTKTLVIDHKTVKAQI 69
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 70 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVAKWLEELRDHADNN----IVIM 125
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK +D G+ R VP + A E+ A + N+ + ETSA E N++ AFL V
Sbjct: 126 LIGNK--SDLGTLRAVPTEDAKEF-AQKENLFFMETSALEATNVESAFLSV 173
>gi|112292985|dbj|BAF02870.1| Rab13 [Mus musculus]
Length = 202
Score = 139 bits (350), Expect = 6e-31, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRQVQREQA-EKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|328768042|gb|EGF78089.1| hypothetical protein BATDEDRAFT_90991 [Batrachochytrium
dendrobatidis JAM81]
Length = 241
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/167 (41%), Positives = 114/167 (68%), Gaps = 7/167 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + ++++ K V LQIWDTAGQ
Sbjct: 46 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELEGKTVKLQIWDTAGQ 105
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q+TF +++ W +E + A G H+ +L+GNK
Sbjct: 106 ERFRTITSSYYRGAHGIIVVYDVTDQETFNNVKQWLQEIDRFASEGVHK----LLVGNKS 161
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D + + +VV K A E+ G IP+ ETSAK N+++AFL +A+
Sbjct: 162 DLE--TKKVVDAKTAGEFATQLG-IPFLETSAKNATNVEQAFLTMAK 205
>gi|21311975|ref|NP_080953.1| ras-related protein Rab-13 [Mus musculus]
gi|46577121|sp|Q9DD03.1|RAB13_MOUSE RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|12832187|dbj|BAB22000.1| unnamed protein product [Mus musculus]
gi|20070865|gb|AAH27214.1| RAB13, member RAS oncogene family [Mus musculus]
gi|148683212|gb|EDL15159.1| RAB13, member RAS oncogene family [Mus musculus]
Length = 202
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRQVQREQA-EKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>gi|409050838|gb|EKM60314.1| hypothetical protein PHACADRAFT_50904, partial [Phanerochaete
carnosa HHB-10118-sp]
Length = 128
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 70/125 (56%), Positives = 91/125 (72%), Gaps = 5/125 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD---DKLVTLQIWDTA 69
LK++V+G SGVGKTSL NQYV +F+ Y+ATIGADF+TK + D+LVTLQIWDTA
Sbjct: 4 LKLVVVGASGVGKTSLRNQYVSGRFTTGYRATIGADFITKSVPHHGNPDELVTLQIWDTA 63
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLL 127
GQERF SL SAF+RGAD +L++DVN +T E+L+ W ++F +A + E F V +
Sbjct: 64 GQERFSSLSSAFFRGADAVLLMFDVNQPQTLEALRKWWDDFRDKAPVADDEVDSFCSVFV 123
Query: 128 GNKID 132
GNKID
Sbjct: 124 GNKID 128
>gi|109940137|sp|P25766.2|RGP1_ORYSJ RecName: Full=Ras-related protein RGP1; AltName: Full=GTP-binding
regulatory protein RGP1
gi|50251643|dbj|BAD29646.1| putative ras-related GTP-binding protein [Oryza sativa Japonica
Group]
gi|222641214|gb|EEE69346.1| hypothetical protein OsJ_28668 [Oryza sativa Japonica Group]
Length = 226
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDS VGK+ L+ ++ N+F+ KATIG +F T+ L +D + V QIWDTAGQ
Sbjct: 18 VFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQ 77
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +++F+ + W EE AD + +L+GNK
Sbjct: 78 ERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD----KNIVIMLIGNK- 132
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+D G+ RVVP + A E+ A R N+ + ETSA E N++ AF+ V
Sbjct: 133 -SDLGTLRVVPTEDAKEF-AERENLFFMETSALESTNVENAFMTV 175
>gi|90085076|dbj|BAE91279.1| unnamed protein product [Macaca fascicularis]
Length = 187
Score = 139 bits (350), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 76/185 (41%), Positives = 118/185 (63%), Gaps = 8/185 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+ +I
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKSGGPEIR 179
Query: 190 YQPQG 194
+ Q
Sbjct: 180 KRQQA 184
>gi|38194437|gb|AAR13228.1| Rab family GTPase Rab8 [Fucus distichus]
Length = 205
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 108/166 (65%), Gaps = 7/166 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++++GD+GVGKT L+ +Y + FSQ + TIG DF K + +D K + LQIWDTAGQE
Sbjct: 12 IKLLMIGDTGVGKTCLLLRYANDSFSQTFITTIGIDFKIKNIDLDSKRIKLQIWDTAGQE 71
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+++ ++++RGA +LVYDV +K+F S++NW + + AD A +L+GNK D
Sbjct: 72 RFRTITTSYFRGAQGILLVYDVTDKKSFNSIRNWVAQIQQHADV----AVNKILIGNKCD 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D R V +++ A G I +FETSAK D N+++ F+ +A
Sbjct: 128 MD--EDREVSKEEGANLAAEYG-IQFFETSAKNDINVEKGFITIAR 170
>gi|15238852|ref|NP_199607.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
gi|75333691|sp|Q9FE79.1|RAA4C_ARATH RecName: Full=Ras-related protein RABA4c; Short=AtRABA4c; AltName:
Full=Ras-related protein SMG1
gi|12004623|gb|AAG44121.1|AF218121_1 small molecular weight g-protein [Arabidopsis thaliana]
gi|9758522|dbj|BAB09048.1| RAS superfamily GTP-binding protein-like [Arabidopsis thaliana]
gi|89111906|gb|ABD60725.1| At5g47960 [Arabidopsis thaliana]
gi|332008216|gb|AED95599.1| RAB GTPase homolog A4C [Arabidopsis thaliana]
Length = 223
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L+ ++ N+FS + KATIG +F T+ L++D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK TD G+ R VP + A E+ A R N+ + ETSA + N++ +FL V
Sbjct: 125 LIGNK--TDLGTLRAVPTEDAKEF-AQRENLFFMETSALDSNNVEPSFLTV 172
>gi|12843097|dbj|BAB25858.1| unnamed protein product [Mus musculus]
Length = 200
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRHIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|224120212|ref|XP_002330992.1| predicted protein [Populus trichocarpa]
gi|222872922|gb|EEF10053.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 110/174 (63%), Gaps = 7/174 (4%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+ N K + K++++GDS VGK+ + ++ N+F+ KATIG +F TK L MD+K V
Sbjct: 5 VDYNQKIDYVFKIVLIGDSAVGKSQFLARFARNEFNADSKATIGVEFQTKTLAMDNKTVK 64
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
QIWDTAGQER++++ SA+YRGA +LVYD+ +++F+ L W EE AD ++
Sbjct: 65 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHLARWLEELRGHAD----KSI 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AF V
Sbjct: 121 IIMLIGNKCDL--GSLRAVPTEDAEEF-AQRENLFFMETSALEATNVETAFWTV 171
>gi|449464898|ref|XP_004150166.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
gi|449476501|ref|XP_004154754.1| PREDICTED: ras-related protein RABA4d-like [Cucumis sativus]
Length = 223
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 76/171 (44%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNEFSVDSKATIGVEFQTKTLVIDQKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AF +
Sbjct: 125 LIGNKCDL--GSLRAVPTEDAQEF-AERENLFFMETSALESTNVETAFFTI 172
>gi|383100637|emb|CCF17540.1| RabE GTPase protein [Micrasterias denticulata]
Length = 206
Score = 139 bits (350), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 69/165 (41%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK++++GDS VGK+SL+ ++ + FSQ + +TIG DF T+ + +D + V L IWDTAGQE
Sbjct: 13 LKLLLIGDSSVGKSSLLLRFAEDSFSQTFISTIGVDFKTRTIDIDGEQVKLSIWDTAGQE 72
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+++ +A+YRGA+ VLVYD+ + +F S++ W ++ + E +L+GNK D
Sbjct: 73 RFRTITAAYYRGANGIVLVYDITSESSFNSIRGW----IRNIEEHASENVCKILVGNKAD 128
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
+ R V K+ + A I +FETSAK D N++EAF+C+A
Sbjct: 129 ME---DRRVVSKEQGQALANEFRIKFFETSAKADINVEEAFVCIA 170
>gi|255583280|ref|XP_002532404.1| protein with unknown function [Ricinus communis]
gi|223527900|gb|EEF29989.1| protein with unknown function [Ricinus communis]
Length = 223
Score = 139 bits (349), Expect = 8e-31, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 109/174 (62%), Gaps = 7/174 (4%)
Query: 3 ISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVT 62
+ N K + K++++GDS VGK+ L+ ++ N+F KATIG +F TK L +D+K V
Sbjct: 5 VDFNQKIDYVFKIVLIGDSAVGKSQLLARFARNEFCVDSKATIGVEFQTKTLSIDNKTVK 64
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
QIWDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD
Sbjct: 65 AQIWDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADKN----I 120
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL V
Sbjct: 121 VIMLIGNKCDL--GSLRAVPIEDAQEF-AQRENLFFMETSALESTNVETAFLTV 171
>gi|354469298|ref|XP_003497066.1| PREDICTED: ras-related protein Rab-10-like [Cricetulus griseus]
Length = 200
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKSKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|388498522|gb|AFK37327.1| unknown [Lotus japonicus]
Length = 212
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 108/165 (65%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +++ DK V QIWDTAGQ
Sbjct: 11 LFKLVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSVRIHDKTVKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYDV Q TFE++Q W +E D +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALIVYDVTRQVTFENVQRWLKELRDHTDAN----IVIMLVGNKA 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D R VP ++A + A R N + ETSA E N+D AF+ V
Sbjct: 127 DLR--HLRAVPTEEATAF-AERENTYFMETSALESLNVDNAFIEV 168
>gi|357157817|ref|XP_003577923.1| PREDICTED: ras-related protein RGP1-like isoform 1 [Brachypodium
distachyon]
Length = 226
Score = 139 bits (349), Expect = 9e-31, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDS VGK+ L+ ++ N+FS KATIG +F T+ LQ+D + + QIWDTAGQ
Sbjct: 17 VFKVVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLQVDQRTIKAQIWDTAGQ 76
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +L+GNK
Sbjct: 77 ERYRAVTSAYYRGAVGAMLVYDITKRQSFDHMARWLEELRAHADKN----LVIMLIGNK- 131
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D G+ RVVP + A E+ A R ++ + ETSA E N++ AF
Sbjct: 132 -SDLGTLRVVPTEDAKEFAA-RESLFFMETSALEATNVENAF 171
>gi|399217674|emb|CCF74561.1| unnamed protein product [Babesia microti strain RI]
Length = 272
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 72/175 (41%), Positives = 119/175 (68%), Gaps = 8/175 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+SL+ ++ + F+ + +TIG DF K + +D K V LQIWDTAGQ
Sbjct: 79 LFKILIIGDSGVGKSSLLLRFSDDTFNDSFLSTIGVDFKIKTVNIDKKSVKLQIWDTAGQ 138
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++Y+GA ++VYDV +++F++++ W ++ K A P + +L+GNKI
Sbjct: 139 ERFRTITSSYYKGAQGIIVVYDVTNKESFDNVKKWLDDIEKYAAPSVTK----MLVGNKI 194
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
D + ++R V + A ++ A N+ + E+SAKE N++ AFL +AE +LKN K
Sbjct: 195 DVE--ANRQVKSQTAKDY-ATSQNMTFIESSAKESTNVERAFLLMAE-SLKNSSK 245
>gi|432946632|ref|XP_004083834.1| PREDICTED: ras-related protein Rab-10-like [Oryzias latipes]
Length = 201
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD++ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDISNTKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE LK
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILK 172
>gi|7710086|ref|NP_057885.1| ras-related protein Rab-10 [Mus musculus]
gi|61889071|ref|NP_059055.2| ras-related protein Rab-10 [Rattus norvegicus]
gi|155372291|ref|NP_001094758.1| ras-related protein Rab-10 [Bos taurus]
gi|197099764|ref|NP_001126682.1| ras-related protein Rab-10 [Pongo abelii]
gi|256222019|ref|NP_057215.3| ras-related protein Rab-10 [Homo sapiens]
gi|311771751|ref|NP_001003277.2| ras-related protein Rab-10 [Canis lupus familiaris]
gi|340007402|ref|NP_001229989.1| RAB10, member RAS oncogene family [Sus scrofa]
gi|114576514|ref|XP_525714.2| PREDICTED: ras-related protein Rab-10 isoform 4 [Pan troglodytes]
gi|149727712|ref|XP_001502863.1| PREDICTED: ras-related protein Rab-10-like [Equus caballus]
gi|291387085|ref|XP_002710022.1| PREDICTED: RAB10, member RAS oncogene family-like [Oryctolagus
cuniculus]
gi|296224339|ref|XP_002758008.1| PREDICTED: ras-related protein Rab-10-like [Callithrix jacchus]
gi|301756020|ref|XP_002913834.1| PREDICTED: ras-related protein Rab-10-like [Ailuropoda melanoleuca]
gi|332242957|ref|XP_003270648.1| PREDICTED: ras-related protein Rab-10 isoform 1 [Nomascus
leucogenys]
gi|344280395|ref|XP_003411969.1| PREDICTED: ras-related protein Rab-10-like [Loxodonta africana]
gi|395828684|ref|XP_003787497.1| PREDICTED: ras-related protein Rab-10 [Otolemur garnettii]
gi|397513606|ref|XP_003827102.1| PREDICTED: ras-related protein Rab-10-like [Pan paniscus]
gi|403288243|ref|XP_003935319.1| PREDICTED: ras-related protein Rab-10-like [Saimiri boliviensis
boliviensis]
gi|410955664|ref|XP_003984471.1| PREDICTED: ras-related protein Rab-10 [Felis catus]
gi|426334961|ref|XP_004029003.1| PREDICTED: ras-related protein Rab-10-like [Gorilla gorilla
gorilla]
gi|46577638|sp|P61026.1|RAB10_HUMAN RecName: Full=Ras-related protein Rab-10
gi|46577639|sp|P61027.1|RAB10_MOUSE RecName: Full=Ras-related protein Rab-10
gi|75070495|sp|Q5R5U1.1|RAB10_PONAB RecName: Full=Ras-related protein Rab-10
gi|10121882|gb|AAG13413.1|AF297660_1 RAB10 [Homo sapiens]
gi|20379066|gb|AAM21093.1|AF498945_1 small GTP binding protein RAB10 [Homo sapiens]
gi|33150538|gb|AAP97147.1|AF086917_1 rab10 [Homo sapiens]
gi|3406428|gb|AAC29313.1| Rab10 [Mus musculus]
gi|5410328|gb|AAD43034.1| ras-related GTP-binding protein [Homo sapiens]
gi|10435058|dbj|BAB14474.1| unnamed protein product [Homo sapiens]
gi|12654157|gb|AAH00896.1| RAB10, member RAS oncogene family [Homo sapiens]
gi|26352864|dbj|BAC40062.1| unnamed protein product [Mus musculus]
gi|26390320|dbj|BAC25878.1| unnamed protein product [Mus musculus]
gi|33989422|gb|AAH56374.1| RAB10, member RAS oncogene family [Mus musculus]
gi|48146723|emb|CAG33584.1| RAB10 [Homo sapiens]
gi|55715653|gb|AAH85744.1| RAB10, member RAS oncogene family [Rattus norvegicus]
gi|55732345|emb|CAH92875.1| hypothetical protein [Pongo abelii]
gi|71060115|emb|CAJ18601.1| Rab10 [Mus musculus]
gi|74142264|dbj|BAE31896.1| unnamed protein product [Mus musculus]
gi|74144564|dbj|BAE36116.1| unnamed protein product [Mus musculus]
gi|74149126|dbj|BAE22371.1| unnamed protein product [Mus musculus]
gi|74195726|dbj|BAE30429.1| unnamed protein product [Mus musculus]
gi|74196963|dbj|BAE35038.1| unnamed protein product [Mus musculus]
gi|74204709|dbj|BAE35423.1| unnamed protein product [Mus musculus]
gi|74212200|dbj|BAE40259.1| unnamed protein product [Mus musculus]
gi|74213449|dbj|BAE35538.1| unnamed protein product [Mus musculus]
gi|74214105|dbj|BAE29464.1| unnamed protein product [Mus musculus]
gi|74219481|dbj|BAE29515.1| unnamed protein product [Mus musculus]
gi|74226932|dbj|BAE27109.1| unnamed protein product [Mus musculus]
gi|112292977|dbj|BAF02866.1| Rab10 [Mus musculus]
gi|119621115|gb|EAX00710.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119621116|gb|EAX00711.1| RAB10, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|148669455|gb|EDL01402.1| RAB10, member RAS oncogene family [Mus musculus]
gi|149050831|gb|EDM03004.1| RAB10, member RAS oncogene family, isoform CRA_a [Rattus
norvegicus]
gi|151556300|gb|AAI48074.1| RAB10 protein [Bos taurus]
gi|261861502|dbj|BAI47273.1| RAB10, member RAS oncogene family [synthetic construct]
gi|281344975|gb|EFB20559.1| hypothetical protein PANDA_001688 [Ailuropoda melanoleuca]
gi|296482330|tpg|DAA24445.1| TPA: ras-related GTP-binding protein RAB10 [Bos taurus]
gi|312151766|gb|ADQ32395.1| RAB10, member RAS oncogene family [synthetic construct]
gi|351715996|gb|EHB18915.1| Ras-related protein Rab-10 [Heterocephalus glaber]
gi|355565524|gb|EHH21953.1| hypothetical protein EGK_05128 [Macaca mulatta]
gi|355751171|gb|EHH55426.1| hypothetical protein EGM_04635 [Macaca fascicularis]
gi|380783957|gb|AFE63854.1| ras-related protein Rab-10 [Macaca mulatta]
gi|383409653|gb|AFH28040.1| ras-related protein Rab-10 [Macaca mulatta]
gi|384942192|gb|AFI34701.1| ras-related protein Rab-10 [Macaca mulatta]
gi|410267930|gb|JAA21931.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|410350797|gb|JAA42002.1| RAB10, member RAS oncogene family [Pan troglodytes]
gi|432096825|gb|ELK27403.1| Ras-related protein Rab-10 [Myotis davidii]
gi|440906101|gb|ELR56406.1| Ras-related protein Rab-10 [Bos grunniens mutus]
Length = 200
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|55729263|emb|CAH91367.1| hypothetical protein [Pongo abelii]
Length = 200
Score = 139 bits (349), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|432896162|ref|XP_004076289.1| PREDICTED: ras-related protein Rab-32-like [Oryzias latipes]
Length = 207
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 75/174 (43%), Positives = 106/174 (60%), Gaps = 6/174 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIWDTAG 70
L KV+V+GD GVGKTS++ +YV+ FSQ Y+ATIG DFV K LQ D D++V LQ+WD AG
Sbjct: 7 LFKVLVIGDLGVGKTSIIKRYVHQIFSQHYRATIGVDFVLKVLQWDNDRVVRLQLWDIAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QER+ ++ +YR A ++V+DV TF+++ W+++ + P VLL NK
Sbjct: 67 QERYGNMTRVYYREAVGALVVFDVTRASTFDAVLKWKDDLDSKVTLSHGRPVPAVLLANK 126
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D VP K +C G + +F TSAK++ NI+EA C+ E L NE
Sbjct: 127 SDQMASQ---VP--KLDSFCRENGFVGWFGTSAKDNTNIEEAARCLVEHILTNE 175
>gi|74142282|dbj|BAE31904.1| unnamed protein product [Mus musculus]
gi|74178135|dbj|BAE29855.1| unnamed protein product [Mus musculus]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDMERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|189529263|ref|XP_001342875.2| PREDICTED: ras-related protein Rab-38 [Danio rerio]
Length = 211
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 118/201 (58%), Gaps = 6/201 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L +D + V LQ+WD
Sbjct: 7 KEHLYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETVRLQLWDI 66
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF ++ +YR A +V+DV TFE++ W+E+ + + VLL
Sbjct: 67 AGQERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLA 126
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK D G K ++C G + +FETSAKE+ NIDEA C+ + + NE+ +
Sbjct: 127 NKCD-QGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANENDLL 185
Query: 189 YYQPQGISETVSEVEQ--RGG 207
+ +++T+S ++ RGG
Sbjct: 186 QSE---VADTISPQQESSRGG 203
>gi|356550253|ref|XP_003543502.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 215
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 79/205 (38%), Positives = 118/205 (57%), Gaps = 14/205 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++ D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEQDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ VL+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----VLVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S RVVP K G I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRVVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 191 QPQGIS-------ETVSEVEQRGGC 208
+P GI T EV Q+ C
Sbjct: 189 EPAGIKINNQLDHATAGEVAQKSAC 213
>gi|240849281|ref|NP_001155333.1| ras-related protein Rab-10 [Ovis aries]
gi|238566728|gb|ACR46624.1| RAB10 [Ovis aries]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|117939085|dbj|BAF36696.1| Small G Protein RAB [Symbiotic protist of Reticulitermes speratus]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 78/208 (37%), Positives = 126/208 (60%), Gaps = 20/208 (9%)
Query: 15 VIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERF 74
++++GDSGVGK++L+ +Y N+F+ + K+TIG +F TK +Q D+K + QIWDTAGQ+R+
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATKSIQFDNKTIKAQIWDTAGQDRY 60
Query: 75 QSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTD 134
+++ SA YRGA +LVYD++ T+E++ W +E QADP + +L+GNK +D
Sbjct: 61 RAVTSACYRGAVGALLVYDISKHTTYENVDKWLKELRDQADP----SIVIMLVGNK--SD 114
Query: 135 GGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI------ 188
R VP ++A + A R N+ + ETSA + N++ AF + + KN ++
Sbjct: 115 LRHLRNVPTEEAKSF-AQRNNLSFIETSASQSTNVESAFNTILQEIYKNVVRNTGVSGDD 173
Query: 189 --YYQPQGISETVSEVEQRGG----CAC 210
+P+G E V V++ GG C C
Sbjct: 174 SKSSKPEG-GEIVVNVDEGGGDKSKCPC 200
>gi|406604644|emb|CCH43902.1| Ras-related protein [Wickerhamomyces ciferrii]
Length = 203
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 76/199 (38%), Positives = 124/199 (62%), Gaps = 10/199 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LK++++GDSGVGK+ L+ ++V +KF+ + TIG DF + +++D K + LQ+WDTAGQ
Sbjct: 13 ILKLLLVGDSGVGKSCLLLRFVEDKFNPSFITTIGIDFKIRTIEIDGKRIKLQVWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV ++TFE+++NW + + A +E +L+GNK
Sbjct: 73 ERFRTITTAYYRGATGIILVYDVTDERTFENVRNWFQTVHQHA----NEDTQLILVGNK- 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN--EHKDIY 189
D R V ++ E A IP+ E SAK + N+DE F +A+I +N ++++
Sbjct: 128 -NDEKDLRAVSSERG-ESLAQELGIPFLEASAKTNDNVDELFFKLAKIIQENNKSNENLN 185
Query: 190 YQPQGISETVSEVEQRGGC 208
GI+ S E +G C
Sbjct: 186 SNNGGINVN-SRTESKGCC 203
>gi|123398520|ref|XP_001301291.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121882455|gb|EAX88361.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 198
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 65/163 (39%), Positives = 106/163 (65%), Gaps = 3/163 (1%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
++ K++VLGDS VGKTS+++ ++ +F +K+TIGADF + E+ +D + LQIWDTAG
Sbjct: 4 HVCKLVVLGDSSVGKTSIIHNFINKEFVANFKSTIGADFSSTEIDVDQNKIELQIWDTAG 63
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF S+ S FYRG+D C+LV+D+ +F++L WR+ L++ + + PF+++ NK
Sbjct: 64 QERFHSVSSTFYRGSDACILVFDITNHDSFKNLCKWRQSMLEKGGMDDTRSFPFIIMANK 123
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + S + V Q++ + + + G SAK NI++AF
Sbjct: 124 SDLE--SQQAVSQEEYMSYASEIG-AKVINVSAKTGINIEKAF 163
>gi|15242483|ref|NP_199387.1| Ras-related protein RABA1c [Arabidopsis thaliana]
gi|297794685|ref|XP_002865227.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|75171186|sp|Q9FK68.1|RAA1C_ARATH RecName: Full=Ras-related protein RABA1c; Short=AtRABA1c
gi|13877913|gb|AAK44034.1|AF370219_1 putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|9758678|dbj|BAB09217.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|16323446|gb|AAL15217.1| putative Rab-type small GTP-binding protein [Arabidopsis thaliana]
gi|297311062|gb|EFH41486.1| hypothetical protein ARALYDRAFT_494409 [Arabidopsis lyrata subsp.
lyrata]
gi|332007909|gb|AED95292.1| Ras-related protein RABA1c [Arabidopsis thaliana]
Length = 216
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 110/174 (63%), Gaps = 10/174 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +DDK++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPN----IVVMLVGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
D V Q + + A + ++ + ETSA E N++ AF AE+ + H
Sbjct: 129 DL---RHLVAVQTEDAKSFAEKESLYFMETSALEATNVENAF---AEVLTQIHH 176
>gi|356517446|ref|XP_003527398.1| PREDICTED: ras-related protein RABA1f-like isoform 1 [Glycine max]
gi|356517448|ref|XP_003527399.1| PREDICTED: ras-related protein RABA1f-like isoform 2 [Glycine max]
Length = 217
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N+D AF
Sbjct: 129 DLRHLRAVATNDAKAF---AERENTFFMETSALESLNVDNAF 167
>gi|217070948|gb|ACJ83834.1| unknown [Medicago truncatula]
Length = 229
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/163 (43%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDSGVGK+ L+N++V N+F + KATIG +F+TK + MD KLV QIWDTAGQ
Sbjct: 16 MFKVVMIGDSGVGKSQLLNRFVRNEFHLKSKATIGVEFLTKTVLMDHKLVKAQIWDTAGQ 75
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +A+YRGA +L YD+ + TF ++ W +E AD +L+GNK
Sbjct: 76 ERYQAITTAYYRGATGALLTYDITKRHTFNHIEKWLDELHNHADKN----IVVMLVGNK- 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+D S R VP ++A + +G + ETSA + N++ AFL
Sbjct: 131 -SDLSSIREVPIEEAEDLAKQKG-FFFIETSALDSNNVEPAFL 171
>gi|417396973|gb|JAA45520.1| Putative rab subfamily protein of small gtpase [Desmodus rotundus]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAKEHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|47222415|emb|CAG12935.1| unnamed protein product [Tetraodon nigroviridis]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE LK
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILK 172
>gi|50540198|ref|NP_001002566.1| ras-related protein Rab-10 [Danio rerio]
gi|49902983|gb|AAH76234.1| Zgc:92757 [Danio rerio]
Length = 201
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE LK
Sbjct: 125 DME--DKRVVPKAKG-EQIAKEHGIRFFETSAKANINIEKAFLTLAEDILK 172
>gi|432908627|ref|XP_004077954.1| PREDICTED: ras-related protein Rab-13-like [Oryzias latipes]
Length = 200
Score = 138 bits (348), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + ++ Y +TIG DF K +++D K V LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNYNTTYISTIGIDFKVKTIEVDGKKVKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIRENASAG----VTRMLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + + R V K+ E A I +FETSAK N++E+F +A L+ K
Sbjct: 124 DVE--AKRKVS-KETGETLAKEHAIRFFETSAKSSINVEESFQALARDILQKSTKK--SG 178
Query: 192 PQGISETVSEVEQRGGCAC 210
P G ++ Q+ C
Sbjct: 179 PTGREVKITSNTQQKSSKC 197
>gi|323450177|gb|EGB06060.1| hypothetical protein AURANDRAFT_38219 [Aureococcus anophagefferens]
Length = 204
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 71/167 (42%), Positives = 112/167 (67%), Gaps = 8/167 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GD+GVGK+ L+ ++ + F++ Y +TIG DF + +++D K V LQIWDTAG
Sbjct: 8 HLFKLVLIGDTGVGKSCLLLRFADDAFTESYISTIGVDFRFRTVKVDGKTVKLQIWDTAG 67
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ SA+YRGAD ++VYDV ++F+ + +W E + A+ G C +L+GNK
Sbjct: 68 QERFRTITSAYYRGADGIIMVYDVTSSESFDHVSDWLTEVNRYANEG---TCK-LLVGNK 123
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV + A E+ G IP+ ETSAK N++EAFL +A
Sbjct: 124 CDME---DKVVTTEAAKEYADGLG-IPFLETSAKNATNVEEAFLTMA 166
>gi|219879825|gb|ABW35313.2| Rab1A [Guillardia theta]
gi|428167960|gb|EKX36911.1| hypothetical protein GUITHDRAFT_97443 [Guillardia theta CCMP2712]
Length = 530
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 113/182 (62%), Gaps = 6/182 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLK++++GDS VGKTSL+ ++ + FS + +TIG DF + + + DK + LQIWDTAGQ
Sbjct: 312 LLKIVLVGDSDVGKTSLLTRFSDDNFSNSFISTIGVDFRWRTMSIKDKNIKLQIWDTAGQ 371
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ SA+YRGAD V+VYD+ +++F+ + W +E K D +++GNK
Sbjct: 372 ERFRTITSAYYRGADGIVVVYDITNKESFDHVDMWMKEIHKFTDDNH---VRVLVVGNKC 428
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + R +P A E+C RG + ETSAK ++ AF+ +AE L+N K +
Sbjct: 429 DME--EKREIPTSLAREYCNQRG-MKVVETSAKTATRVNTAFIDMAEEILENRQKFAENK 485
Query: 192 PQ 193
P+
Sbjct: 486 PK 487
>gi|226500010|ref|NP_001149955.1| LOC100283582 [Zea mays]
gi|195635711|gb|ACG37324.1| ras-related protein RIC2 [Zea mays]
Length = 217
Score = 138 bits (347), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R ++ + ETSA E N++ AF
Sbjct: 130 DLRHLVAVQTDEGKAF---AERESLYFMETSALESTNVENAF 168
>gi|410987028|ref|XP_003999810.1| PREDICTED: ras-related protein Rab-13 [Felis catus]
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVQR----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRRVRKEQADQLAREHG-IRFFETSAKSSTNVDEAFSSLARDILLKS 173
>gi|354478940|ref|XP_003501672.1| PREDICTED: ras-related protein Rab-13-like [Cricetulus griseus]
gi|81909832|sp|Q5KTJ6.1|RAB13_MESAU RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|57157445|dbj|BAD83700.1| Rab13 [Mesocricetus auratus]
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 116/174 (66%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVEIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKVLKEQADKLAREHG-IRFFETSAKSSMNVDEAFNSLARDILLKS 173
>gi|224035169|gb|ACN36660.1| unknown [Zea mays]
gi|413954315|gb|AFW86964.1| ras protein RIC2 [Zea mays]
Length = 217
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R ++ + ETSA E N++ AF
Sbjct: 130 DLRHLVAVQTDEGKAF---AERESLYFMETSALESTNVENAF 168
>gi|327277637|ref|XP_003223570.1| PREDICTED: ras-related protein Rab-10-like [Anolis carolinensis]
Length = 204
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+++ G+S VGKTS++ +Y + Y ATIG DF K + ++D + LQIWDTAGQER
Sbjct: 17 KIVMAGESCVGKTSILQRYTERGPTASYIATIGIDFKVKTISLNDTTMQLQIWDTAGQER 76
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
F + ++F+RGA VLVYDV ++F+ + +W ++ ++ D E +LLGNK D
Sbjct: 77 FHTFTTSFFRGAHGFVLVYDVTSTESFQGIAHWMKDIYEKTD----ETINIILLGNKCDK 132
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
+ RV+P+ + E A+ IP+FETSAK++ NID+AF +AE
Sbjct: 133 E--MERVIPKNRG-EKLAWEYGIPFFETSAKDNINIDDAFSVLAE 174
>gi|212723804|ref|NP_001132839.1| uncharacterized protein LOC100194331 [Zea mays]
gi|242096112|ref|XP_002438546.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|194695542|gb|ACF81855.1| unknown [Zea mays]
gi|195624594|gb|ACG34127.1| ras-related protein RIC2 [Zea mays]
gi|195643338|gb|ACG41137.1| ras-related protein RIC2 [Zea mays]
gi|241916769|gb|EER89913.1| hypothetical protein SORBIDRAFT_10g021730 [Sorghum bicolor]
gi|413943895|gb|AFW76544.1| Ras protein RIC2 [Zea mays]
Length = 217
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R ++ + ETSA E N++ AF
Sbjct: 130 DLRHLVAVQTDEGKAF---AERESLYFMETSALESTNVENAF 168
>gi|387017950|gb|AFJ51093.1| ras-related protein Rab-13-like [Crotalus adamanteus]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 116/177 (65%), Gaps = 8/177 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + FS Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFSEDSFSGTYISTIGIDFKIRTVEVEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHK 186
D + R V + +A + C G I +FETSAK N++EAF +A +I L++ K
Sbjct: 123 CDME--VKRKVSRDQAEKLCREHG-IRFFETSAKSSLNVEEAFNTLARDILLRSIKK 176
>gi|390369193|ref|XP_782400.2| PREDICTED: ras-related protein Rab-32-like [Strongylocentrotus
purpuratus]
Length = 214
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 81/208 (38%), Positives = 117/208 (56%), Gaps = 8/208 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
KR +L KV+V+GD GVGKTS++ +YV+ FSQ Y+ATIG DF K + D D L+ LQ+W
Sbjct: 7 KREHLYKVLVIGDLGVGKTSVIKRYVHQFFSQHYRATIGVDFALKVINWDADTLIRLQLW 66
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
D AGQERF ++ +Y+ A +V+DV TFE++ W+ + + A P VL
Sbjct: 67 DIAGQERFGNMTRVYYKEAVGAFIVFDVTRVSTFEAVAKWKHDLDSKVQLPNGTAIPAVL 126
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEA--FLCVAEI----A 180
L NK D V + E+C +G I +FETSAK++ NIDEA FL + + A
Sbjct: 127 LANKCDQ-TKEGLVNNSSQMDEYCKDKGFINWFETSAKDNINIDEAARFLVTSILANDKA 185
Query: 181 LKNEHKDIYYQPQGISETVSEVEQRGGC 208
+ +E + P + E++G C
Sbjct: 186 IHHEETEQDNDPFKLDGEKPPAEEKGAC 213
>gi|131804|sp|P24409.1|RAB10_CANFA RecName: Full=Ras-related protein Rab-10
gi|915|emb|CAA39798.1| rab10 [Canis lupus familiaris]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKVNINIEKAFLTLAEDILR 172
>gi|255642121|gb|ACU21326.1| unknown [Glycine max]
Length = 217
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVEKWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N+D AF
Sbjct: 129 DLRHLRAVSTDDAKAF---AERENTFFMETSALESLNVDNAF 167
>gi|343962013|dbj|BAK62594.1| ras-related protein Rab-10 [Pan troglodytes]
Length = 200
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPTGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|390476751|ref|XP_003735179.1| PREDICTED: ras-related protein Rab-13-like [Callithrix jacchus]
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKVQKEQANKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|392567789|gb|EIW60964.1| GTP-binding protein ypt1 [Trametes versicolor FP-101664 SS1]
Length = 203
Score = 138 bits (347), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 80/207 (38%), Positives = 126/207 (60%), Gaps = 19/207 (9%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + F+ Y +TIG DF + ++++ K V LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFAEDAFTDSYLSTIGVDFKIRTIELEGKTVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA ++VYDV Q+TF +++ W E + A G + +++GNK
Sbjct: 68 ERFRTIAAAYYRGAQGIIMVYDVTEQETFSNVKGWITEIERYASEGVKK----LIIGNK- 122
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
+D +VV A E+ A +IP+ ETSAK N++EAF +A+ +K+E + +
Sbjct: 123 -SDLVERKVVEYSIAKEF-ADSLSIPFIETSAKNSTNVEEAFTLMAK-TIKDECPE---E 176
Query: 192 PQGISETVSEVEQR--------GGCAC 210
G S+T S R GGCAC
Sbjct: 177 SSGASKTTSVTPGRNLSQENESGGCAC 203
>gi|356543002|ref|XP_003539952.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N+D AF
Sbjct: 129 DLRHLRAVSTDDAKAF---AERENTFFMETSALESLNVDNAF 167
>gi|167537652|ref|XP_001750494.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771034|gb|EDQ84708.1| predicted protein [Monosiga brevicollis MX1]
Length = 204
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/207 (35%), Positives = 124/207 (59%), Gaps = 21/207 (10%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ ++F+ + +TIG DF K +++DDK + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCILFRFSEDQFNSTFISTIGIDFKIKTIELDDKKIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+F++++ W ++ + ++LGNK
Sbjct: 68 ERFRTITTAYYRGAMGIMLVYDITAEKSFDNIKTW----IRNIEQNASSDVERMILGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA----------EIAL 181
D + RVV ++ + A G +P+FETSAK +++EAF +A E++
Sbjct: 124 DME--DKRVVSTEQGEKLAAEYG-VPFFETSAKSKIHVEEAFFAMARSIKQKMDSKEVST 180
Query: 182 KNEHKDIYYQPQGISETVSEVEQRGGC 208
+EH+ +P E S GGC
Sbjct: 181 PHEHEKDIIKPDNKPEPKS----GGGC 203
>gi|444705937|gb|ELW47313.1| Nuclear pore membrane glycoprotein 210-like protein [Tupaia
chinensis]
Length = 2031
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 1835 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 1894
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 1895 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 1950
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 1951 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFNSLARDILLKS 2001
>gi|440297956|gb|ELP90597.1| ehrab7g protein, putative [Entamoeba invadens IP1]
Length = 197
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/199 (38%), Positives = 114/199 (57%), Gaps = 11/199 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+LK+I++G SGVGKTS++ ++V NKF YK+TIG DF+ K + +D + +LQIWDTAG
Sbjct: 7 MLKIILIGSSGVGKTSIIQRFVTNKFDPIYKSTIGCDFLAKTVNVDGRDYSLQIWDTAGH 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF S+ ++FYRG+D ++V+DV +F + W EF K + E P V+ NK+
Sbjct: 67 ERFSSIVNSFYRGSDGAIVVFDVTSPPSFTDISGWIGEFEKGVNSKE---VPIVIAANKV 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF--LCVAEIALKNEHKDIY 189
D D SR+V ++ +W RG Y ETSA + + F + A A K D
Sbjct: 124 DVD---SRMVSEETGRQWAVGRG-YTYVETSAATSNGVSDLFVEMVKAISAYKKGGNDEG 179
Query: 190 YQPQGISETVSEVEQRGGC 208
+P I + ++ GGC
Sbjct: 180 LEPIPIGNV--QNKEDGGC 196
>gi|338725027|ref|XP_003365067.1| PREDICTED: ras-related protein Rab-13-like [Equus caballus]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|410916971|ref|XP_003971960.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-10-like
[Takifugu rubripes]
Length = 201
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|4506363|ref|NP_002861.1| ras-related protein Rab-13 isoform 1 [Homo sapiens]
gi|386782037|ref|NP_001248220.1| ras-related protein Rab-13 [Macaca mulatta]
gi|297663399|ref|XP_002810164.1| PREDICTED: ras-related protein Rab-13 [Pongo abelii]
gi|332220479|ref|XP_003259383.1| PREDICTED: ras-related protein Rab-13 [Nomascus leucogenys]
gi|332810355|ref|XP_522433.3| PREDICTED: ras-related protein Rab-13 [Pan troglodytes]
gi|397492531|ref|XP_003817175.1| PREDICTED: ras-related protein Rab-13 [Pan paniscus]
gi|402856334|ref|XP_003892746.1| PREDICTED: ras-related protein Rab-13 [Papio anubis]
gi|426331749|ref|XP_004026857.1| PREDICTED: ras-related protein Rab-13 [Gorilla gorilla gorilla]
gi|1710016|sp|P51153.1|RAB13_HUMAN RecName: Full=Ras-related protein Rab-13; AltName: Full=Cell
growth-inhibiting gene 4 protein; Flags: Precursor
gi|20379072|gb|AAM21096.1|AF498948_1 small GTP binding protein RAB13 [Homo sapiens]
gi|452320|emb|CAA53266.1| rab 13 [Homo sapiens]
gi|12654003|gb|AAH00799.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|41350395|gb|AAS00485.1| growth-inhibiting gene 4 protein [Homo sapiens]
gi|54696268|gb|AAV38506.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|54696270|gb|AAV38507.1| RAB13, member RAS oncogene family [Homo sapiens]
gi|61356004|gb|AAX41198.1| RAB13 member RAS oncogene family [synthetic construct]
gi|61356015|gb|AAX41199.1| RAB13 member RAS oncogene family [synthetic construct]
gi|68085671|gb|AAH73168.2| RAB13, member RAS oncogene family [Homo sapiens]
gi|117645128|emb|CAL38030.1| hypothetical protein [synthetic construct]
gi|117645354|emb|CAL38143.1| hypothetical protein [synthetic construct]
gi|117645750|emb|CAL38342.1| hypothetical protein [synthetic construct]
gi|117646294|emb|CAL38614.1| hypothetical protein [synthetic construct]
gi|117646436|emb|CAL38685.1| hypothetical protein [synthetic construct]
gi|117646828|emb|CAL37529.1| hypothetical protein [synthetic construct]
gi|119573633|gb|EAW53248.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573634|gb|EAW53249.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|119573635|gb|EAW53250.1| hCG1996054, isoform CRA_e [Homo sapiens]
gi|158256592|dbj|BAF84269.1| unnamed protein product [Homo sapiens]
gi|208967230|dbj|BAG73629.1| RAB13, member RAS oncogene family [synthetic construct]
gi|355558499|gb|EHH15279.1| hypothetical protein EGK_01346 [Macaca mulatta]
gi|380785379|gb|AFE64565.1| ras-related protein Rab-13 [Macaca mulatta]
gi|384942334|gb|AFI34772.1| ras-related protein Rab-13 [Macaca mulatta]
gi|740475|prf||2005309B rab13 GTPase
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|426216683|ref|XP_004002587.1| PREDICTED: ras-related protein Rab-13 [Ovis aries]
gi|81674373|gb|AAI09841.1| RAB13, member RAS oncogene family [Bos taurus]
gi|296489679|tpg|DAA31792.1| TPA: ras-related protein Rab-13 [Bos taurus]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|196009291|ref|XP_002114511.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
gi|190583530|gb|EDV23601.1| hypothetical protein TRIADDRAFT_27795 [Trichoplax adhaerens]
Length = 184
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 107/172 (62%), Gaps = 5/172 (2%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK--LV 61
++ K+ L K++V+GD GVGKTS++ +YV+ FS QY+ATIG DF K + D +V
Sbjct: 2 NIAAKKEYLYKILVIGDLGVGKTSIIKRYVHQFFSTQYRATIGVDFALKVIDWKDSNSVV 61
Query: 62 TLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA 121
LQ+WD AGQERF ++ +YR A +V+D++ TF+++Q W+ + + GE A
Sbjct: 62 RLQLWDIAGQERFGNMTRVYYREAVGAFIVFDISRASTFDAVQKWKSDLDSKVTIGEDMA 121
Query: 122 CPFVLLGNKIDTDGGSSRVVPQKKALE-WCAYRGNIPYFETSAKEDCNIDEA 172
P VLL NK D D S + + L+ +C +G +FETSAKE+ NIDEA
Sbjct: 122 IPVVLLANKCDIDMES--LANFRGTLDNYCKEKGFAGWFETSAKENINIDEA 171
>gi|148229101|ref|NP_001083268.1| RAB10, member RAS oncogene family [Xenopus laevis]
gi|37747686|gb|AAH60015.1| MGC68629 protein [Xenopus laevis]
Length = 200
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANVNIEKAFLTLAEDILR 172
>gi|70906329|gb|AAZ14933.1| putative GTPase [Coprinellus disseminatus]
Length = 139
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 64/122 (52%), Positives = 88/122 (72%), Gaps = 1/122 (0%)
Query: 50 VTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREE 109
+ KE+ +D + VT IWD++GQERFQ+LG+AFYRG++CCVLV+DV K+FE+L WR+
Sbjct: 1 MVKEVDVDGQTVTFMIWDSSGQERFQTLGTAFYRGSECCVLVFDVTSSKSFEALGRWRDN 60
Query: 110 FLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNI 169
F + A + E P V+LGNK+D D G R V +++A EWC GN+ YFETSAKE N+
Sbjct: 61 FFENAHVRDPEGFPVVVLGNKVDEDLG-KREVSKEQAKEWCRANGNLTYFETSAKECINV 119
Query: 170 DE 171
+E
Sbjct: 120 EE 121
>gi|440892898|gb|ELR45890.1| Ras-related protein Rab-13, partial [Bos grunniens mutus]
Length = 205
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 9 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 68
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 69 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 124
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 125 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 175
>gi|388498830|gb|AFK37481.1| unknown [Medicago truncatula]
Length = 223
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+F+ KATIG +F TK L +D+K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMARWLEELRGHADTN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D G+ + VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 125 LIGNKCDL--GTLKAVPTEDAQEF-AQRENLFFMETSALESTNVETAFLTI 172
>gi|440803020|gb|ELR23934.1| Rab7, putative [Acanthamoeba castellanii str. Neff]
Length = 200
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/180 (42%), Positives = 108/180 (60%), Gaps = 15/180 (8%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
N K + LK+I LGDS QYV +F Y TIG DF TKEL +DD +V LQ
Sbjct: 2 ANTKTKPCLKIIALGDS---------QYVLGRFGN-YAPTIGPDFRTKELLIDDVVVCLQ 51
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEA--C 122
+WDTAGQERF SLG AFYRG + CVLVYD+ ++ E L +W+ + +++ P + E
Sbjct: 52 VWDTAGQERFDSLGRAFYRGTNVCVLVYDITNPRSLERLDHWKRMY-EESMPAQAEVDRT 110
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
F + NK+D +G R V Q +A WC G++P+F SAK+ +++AF +A+ A +
Sbjct: 111 VFGVFANKMDMEG--QRKVSQIEAETWCRENGDMPHFSVSAKDGDGVEQAFNTLAKKAKR 168
>gi|311254230|ref|XP_001927266.2| PREDICTED: ras-related protein Rab-13 [Sus scrofa]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|307102647|gb|EFN50917.1| hypothetical protein CHLNCDRAFT_33302 [Chlorella variabilis]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ Q TFE+++ W +E AD +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKQTTFENVERWLKELRDHADAN----IVIMLVGNK- 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R V + A +C G + + ETSA E N+++AF
Sbjct: 127 -SDLRHLRSVQTEDAKAFCEREG-LSFIETSALEATNVEQAF 166
>gi|54696266|gb|AAV38505.1| RAB13, member RAS oncogene family [synthetic construct]
gi|61365863|gb|AAX42775.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|403302550|ref|XP_003941919.1| PREDICTED: ras-related protein Rab-13 [Saimiri boliviensis
boliviensis]
Length = 202
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 115/174 (66%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V +++A + G I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKVQKEQANKLAREHG-IRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|66792866|ref|NP_001019711.1| ras-related protein Rab-13 [Bos taurus]
gi|75069879|sp|Q58DS5.1|RAB13_BOVIN RecName: Full=Ras-related protein Rab-13; Flags: Precursor
gi|61553216|gb|AAX46369.1| RAB13, member RAS oncogene family [Bos taurus]
Length = 203
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFRIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|357124167|ref|XP_003563776.1| PREDICTED: ras-related protein RIC2-like [Brachypodium distachyon]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+ + W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHATFENAERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R ++ + ETSA E N+++AF
Sbjct: 130 DLRHLVAVQTDEGKAF---AERESLYFMETSALESTNVEDAF 168
>gi|348517548|ref|XP_003446295.1| PREDICTED: ras-related protein Rab-10-like [Oreochromis niloticus]
Length = 201
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|115468476|ref|NP_001057837.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|109940140|sp|P40393.2|RIC2_ORYSJ RecName: Full=Ras-related protein RIC2
gi|13195452|gb|AAK15703.1| GTP-binding protein [Oryza sativa]
gi|53792703|dbj|BAD53715.1| GTP-binding protein [Oryza sativa Japonica Group]
gi|113595877|dbj|BAF19751.1| Os06g0551400 [Oryza sativa Japonica Group]
gi|125555691|gb|EAZ01297.1| hypothetical protein OsI_23327 [Oryza sativa Indica Group]
gi|215694833|dbj|BAG90024.1| unnamed protein product [Oryza sativa Japonica Group]
gi|222635728|gb|EEE65860.1| hypothetical protein OsJ_21648 [Oryza sativa Japonica Group]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D V Q + A R ++ + ETSA E N++ AF
Sbjct: 130 DL---RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAF 168
>gi|152012618|gb|AAI50366.1| LOC100003274 protein [Danio rerio]
Length = 202
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/198 (38%), Positives = 116/198 (58%), Gaps = 6/198 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++V+GD GVGKTS++ +YV+ FS Y+ATIG DF K L +D + V LQ+WD AGQ
Sbjct: 1 LYKILVIGDLGVGKTSIIKRYVHQNFSPNYRATIGVDFALKVLNLDQETVRLQLWDIAGQ 60
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +YR A +V+DV TFE++ W+E+ + + VLL NK
Sbjct: 61 ERFGNMTRVYYREAMGAFIVFDVTRPSTFEAVTKWKEDLDAKLSLSNGKQVAAVLLANKC 120
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D G K ++C G + +FETSAKE+ NIDEA C+ + + NE+ + +
Sbjct: 121 D-QGRDVLTNNGIKMEQFCQENGFVGWFETSAKENINIDEAAHCLVKHIIANENDLLQSE 179
Query: 192 PQGISETVSEVEQ--RGG 207
+++T+S ++ RGG
Sbjct: 180 ---VADTISPQQESSRGG 194
>gi|218228|dbj|BAA02904.1| ras-related GTP binding protein [Oryza sativa]
Length = 217
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ LQ+D K+V QIWDTAGQ
Sbjct: 14 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLQVDGKVVKAQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 74 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLKELRDHTDPN----IVVMLVGNKS 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D V Q + A R ++ + ETSA E N++ AF
Sbjct: 130 DL---RHLVAVQTDEGKAFAERESLYFMETSALESTNVENAF 168
>gi|145549438|ref|XP_001460398.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834400|emb|CAI44535.1| rab_B27 [Paramecium tetraurelia]
gi|124428228|emb|CAK93001.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 76/202 (37%), Positives = 121/202 (59%), Gaps = 13/202 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT+++NQ+ +F Q K TIG +F +K + +DDK V QIWDTAGQ
Sbjct: 11 LYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNIMIDDKTVKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +++YD+ TFE++ W +E + ADP + +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADP----SLQIMIVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
TD R V A+ + A R + + ETSAK+ N+++AF + + K+ K +
Sbjct: 126 -TDQKHIRQVATDCAIAY-AQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSA-KVVKPT 182
Query: 192 PQGISETVSEV-----EQRGGC 208
PQ V++ E+ GC
Sbjct: 183 PQPTKFVVADTDVVKPEKSSGC 204
>gi|403215515|emb|CCK70014.1| hypothetical protein KNAG_0D02650 [Kazachstania naganishii CBS
8797]
Length = 211
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 113/169 (66%), Gaps = 8/169 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+++KV+++GDSGVGK+ L+ ++V +KFS + TIG DF K + ++ K + LQ+WDTAG
Sbjct: 13 SIMKVLLIGDSGVGKSCLLVRFVEDKFSPSFITTIGIDFKIKTVDINGKKIKLQLWDTAG 72
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYDV ++TFE+++NW F +D +A +L+GNK
Sbjct: 73 QERFRTITTAYYRGAMGIILVYDVTDERTFENVKNW---FKTVSDHATDDA-QLLLVGNK 128
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
D D +R+V ++ E IP+ E SAK+D N++E F +A++
Sbjct: 129 CDMD---TRLVTHEQG-EALGKELGIPFVEASAKDDTNVNEVFFTLAKL 173
>gi|61365868|gb|AAX42776.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 137 bits (346), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|60826641|gb|AAX36766.1| RAB13 member RAS oncogene family [synthetic construct]
gi|60826676|gb|AAX36767.1| RAB13 member RAS oncogene family [synthetic construct]
Length = 204
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 123 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|356495927|ref|XP_003516822.1| PREDICTED: ras-related protein RABA4d-like [Glycine max]
Length = 223
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 73/165 (44%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K + QIWDTAGQ
Sbjct: 15 VFKVVLIGDSAVGKTQLLARFARNEFSLDSKATIGVEFQTKTLIIDNKTIKAQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +++F+ + W EE AD + +L+GNK
Sbjct: 75 ERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMVRWLEELRGHAD----QNIVIMLIGNKC 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D GS R VP + A E A R N+ + ETSA E N++ FL +
Sbjct: 131 DL--GSLRAVPMEDA-EEVAQRENLFFMETSALESTNVETCFLTI 172
>gi|410909794|ref|XP_003968375.1| PREDICTED: ras-related protein Rab-38-like [Takifugu rubripes]
Length = 212
Score = 137 bits (345), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 77/207 (37%), Positives = 122/207 (58%), Gaps = 7/207 (3%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N ++ +L K++V+GD GVGKTS++ +YV++ FS Y+ATIG DF K L D + V LQ+
Sbjct: 4 NHQKEHLYKILVIGDLGVGKTSIIKRYVHHNFSPNYRATIGVDFALKVLNWDQETVRLQL 63
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WD AGQERF ++ +YR A +V+DV +FE++ W+E+ + + +
Sbjct: 64 WDIAGQERFGNMTRVYYREAMGAFIVFDVTRPASFEAVTKWKEDLDSKVTLANGKHIATL 123
Query: 126 LLGNKIDTDGGSSRVVPQK--KALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
LL NK D D + V+ K ++C G + ++ETSAKE+ NIDEA C+ + + +
Sbjct: 124 LLANKCDQD---NDVLTNNGIKMDQFCQDNGFVGWYETSAKENINIDEAANCLVKHIIAS 180
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
E KD+ QP+ + ++E+ G C
Sbjct: 181 E-KDM-VQPEVPNTISPQLEKDKGGTC 205
>gi|431892885|gb|ELK03313.1| Ras-related protein Rab-7L1 [Pteropus alecto]
Length = 203
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/187 (39%), Positives = 108/187 (57%), Gaps = 4/187 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G I + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFIGWTETSVKENKNINEAMRVLIEKMMNNSRED 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 MSLSTQG 187
>gi|193606029|ref|XP_001944241.1| PREDICTED: ras-related protein Rab-5C-like [Acyrthosiphon pisum]
Length = 211
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/186 (39%), Positives = 111/186 (59%), Gaps = 7/186 (3%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
K+++LG+S VGK+SL+ ++V +F + ++TIGA F+T+ + ++D V +IWDTAGQE
Sbjct: 21 FKLVLLGESSVGKSSLVLRFVKGQFHEYQESTIGAAFLTQTIHLNDVAVKFEIWDTAGQE 80
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
R+ SL +YRGA ++VYD+ Q TFE +NW +E +QA PG L GNK+D
Sbjct: 81 RYHSLAPMYYRGAQAAIVVYDITNQDTFERAKNWVKELQRQATPG----IVIALAGNKLD 136
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQP 192
+ + R V Q + AY + + ETSAK N+ E F +AE KNE + Q
Sbjct: 137 LN--TMRSV-QTDESQTYAYENGLLFMETSAKTSANVTEIFKAIAEKLPKNETTNTAGQG 193
Query: 193 QGISET 198
+ + E+
Sbjct: 194 RRLVES 199
>gi|414873861|tpg|DAA52418.1| TPA: hypothetical protein ZEAMMB73_441203 [Zea mays]
Length = 234
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 11/169 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N FS K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 19 LFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 78
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFES W E AD +L+GNK
Sbjct: 79 ERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADG---RGAAVMLVGNKT 135
Query: 132 DTDGGSS-------RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D S R VP+ A A R + + ETSA + N+D AF
Sbjct: 136 DLARSGSRSRHHHPRAVPRGDAAA-LAEREGLSFVETSALDATNVDAAF 183
>gi|410222046|gb|JAA08242.1| RAB13, member RAS oncogene family [Pan troglodytes]
Length = 203
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 113/173 (65%), Gaps = 8/173 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 68 ERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 124 DME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 173
>gi|351709745|gb|EHB12664.1| Ras-related protein Rab-10 [Heterocephalus glaber]
Length = 200
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + FS + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFSTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LGNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +A+ L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANTNIEKAFLTLAQDILR 172
>gi|302595187|gb|ADL59582.1| Rab1 [Hevea brasiliensis]
Length = 216
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 75/198 (37%), Positives = 121/198 (61%), Gaps = 9/198 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K + A + I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKG-QALADKYGIKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSKA 188
Query: 191 QPQGISETVSEVEQRGGC 208
+PQ I +++ +Q GG
Sbjct: 189 EPQTIK--INQPDQAGGA 204
>gi|440803019|gb|ELR23933.1| Ras family protein [Acanthamoeba castellanii str. Neff]
Length = 187
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 74/169 (43%), Positives = 104/169 (61%), Gaps = 11/169 (6%)
Query: 29 MNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERFQSLGSAFYRGADCC 88
M +YV KF + Y+A+IGADF+TKEL +DD +V LQ+WDTAGQ+RF++LG FYRG D C
Sbjct: 1 MCRYVQGKFRELYRASIGADFLTKELLVDDTIVYLQVWDTAGQDRFETLGRVFYRGTDVC 60
Query: 89 VLVYDVNVQKTFESLQNWR----EEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQK 144
+LVYD+ ++ E L+ W+ E QAD + F + NK TD R V
Sbjct: 61 ILVYDITNPRSLERLEQWKRVYEESMPTQADV---DHTVFGVFANK--TDLEEQRKVSHA 115
Query: 145 KALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQ 193
KA WC G++P+F SAK+ N+++AF +A+ A + DI+ Q Q
Sbjct: 116 KAEAWCRENGDMPHFSVSAKDGENVEQAFHALAKKAKRK--LDIWNQQQ 162
>gi|297851308|ref|XP_002893535.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|297339377|gb|EFH69794.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
Length = 218
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV++ GDSGVGK++L++++ N FS +ATIG +F T+ +Q DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R N + ETSA E N+D AF
Sbjct: 129 DLRHLRAISTEEAKAF---AERENTFFMETSALEAVNVDNAF 167
>gi|15218719|ref|NP_174177.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
gi|75336857|sp|Q9S810.1|RAA1I_ARATH RecName: Full=Ras-related protein RABA1i; Short=AtRABA1i
gi|6560749|gb|AAF16749.1|AC010155_2 F3M18.2 [Arabidopsis thaliana]
gi|67633398|gb|AAY78624.1| putative Ras-related GTP-binding protein [Arabidopsis thaliana]
gi|332192870|gb|AEE30991.1| RAB GTPase-like protein A1I [Arabidopsis thaliana]
Length = 218
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/162 (43%), Positives = 100/162 (61%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV++ GDSGVGK++L++++ N FS +ATIG +F T+ +Q DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRATIGVEFATRSIQCDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R N + ETSA E N+D AF
Sbjct: 129 DLRHLRAISTEEAKAF---AERENTFFMETSALEAVNVDNAF 167
>gi|4586582|dbj|BAA76423.1| rab-type small GTP-binding protein [Cicer arietinum]
Length = 119
Score = 137 bits (345), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/118 (57%), Positives = 84/118 (71%), Gaps = 1/118 (0%)
Query: 94 VNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYR 153
VNV K+FE+L +WREEFL QA P + E PFV+LGNKID DGG+SRV+ +KKA WCA +
Sbjct: 2 VNVMKSFENLNHWREEFLIQASPSDPENFPFVVLGNKIDVDGGNSRVISEKKAKAWCASK 61
Query: 154 GNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQGISETVSEVEQRG-GCAC 210
GNIPYFETSAKE N++ AF C+A+ ALKNE ++ Y P I +QR GC C
Sbjct: 62 GNIPYFETSAKEGFNVEAAFQCIAKNALKNEPEEEMYLPDTIDVGSGGRQQRSTGCEC 119
>gi|12052826|emb|CAB66585.1| hypothetical protein [Homo sapiens]
gi|190689585|gb|ACE86567.1| RAB10, member RAS oncogene family protein [synthetic construct]
gi|190690949|gb|ACE87249.1| RAB10, member RAS oncogene family protein [synthetic construct]
Length = 200
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K + G I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKGGQIAREHG-IRFFETSAKANINIEKAFLTLAEDILR 172
>gi|356544190|ref|XP_003540537.1| PREDICTED: ras-related protein RABA4c-like [Glycine max]
Length = 228
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ K+++ GDSGVGK+ L+N++V N+F + K TIG +F+T+ + MD KLV QIWDTAGQ
Sbjct: 15 MFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGVEFLTRTVVMDHKLVKAQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +A+YRGA +L YD+ Q+TF+ ++ W +E AD +L+GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN----ILVMLVGNK- 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+D S R VP + A ++ G + + ETSA + N++ AF+
Sbjct: 130 -SDLSSLRAVPTEVARDFAQQEG-LFFLETSALDSSNVESAFI 170
>gi|242091375|ref|XP_002441520.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
gi|241946805|gb|EES19950.1| hypothetical protein SORBIDRAFT_09g028560 [Sorghum bicolor]
Length = 216
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYDV TFE+++ W E D +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELKDHTDAN----IVIMLVGNKA 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D R VP + A + A R N + ETSA E N+++AF V
Sbjct: 128 DL--RHLRAVPTEDAKAF-AERENAFFMETSALEAMNVEDAFTEV 169
>gi|156402311|ref|XP_001639534.1| predicted protein [Nematostella vectensis]
gi|156226663|gb|EDO47471.1| predicted protein [Nematostella vectensis]
Length = 200
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 73/197 (37%), Positives = 119/197 (60%), Gaps = 7/197 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K ++M K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTIEMQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ +KTF+++ W L+ + +E ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITQEKTFDNISKW----LRNIEEHANEDVEKMILGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D R+V +++ E A I + ETSAK + NI++AF +A+ LK E +
Sbjct: 125 DMD--DRRIVSRERG-EQIAREHGIRFLETSAKTNINIEQAFQYLAQDILKKELNKDSEE 181
Query: 192 PQGISETVSEVEQRGGC 208
P + +++GGC
Sbjct: 182 PSNNIHVHDQKDKKGGC 198
>gi|334322507|ref|XP_003340260.1| PREDICTED: LOW QUALITY PROTEIN: ras-related protein Rab-13-like
[Monodelphis domestica]
Length = 201
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 78/201 (38%), Positives = 120/201 (59%), Gaps = 8/201 (3%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + + K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIXGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIY 189
D + R V QK+ E A I +FETSAK N+DEAF +A +I LK+ +
Sbjct: 123 CDME--VKRKV-QKEQAEKLAREHGIRFFETSAKSSLNVDEAFNSLARDILLKSGRRSGN 179
Query: 190 YQPQGISETVSEVEQRGGCAC 210
+ + E++ G C
Sbjct: 180 SNKAPPTTDLKICEKKSGPKC 200
>gi|145521654|ref|XP_001446682.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124414160|emb|CAK79285.1| unnamed protein product [Paramecium tetraurelia]
Length = 210
Score = 137 bits (344), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 110/167 (65%), Gaps = 8/167 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++G+SGVGKT ++ +Y N+F + +TIG DF K++Q+D+K+V +QIWDTAGQ
Sbjct: 15 LIKILLIGNSGVGKTQILLRYTENQFKSSFLSTIGIDFKIKKIQVDEKVVKMQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +Y+GA +LV+ VN ++TF + W + + A + VL+GNK
Sbjct: 75 ERYQTITQTYYKGAMGIILVFAVNDKETFNDIDKWMNQIKQHA----SDNIIKVLIGNKT 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D R + ++AL+ A + NIPYFETSAKE NI++ F +A+
Sbjct: 131 DL---PDRCISYEQALQ-MAQKYNIPYFETSAKEGTNINDTFQQIAK 173
>gi|126303044|ref|XP_001370866.1| PREDICTED: ras-related protein Rab-10-like [Monodelphis domestica]
Length = 200
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|403372916|gb|EJY86368.1| Rab A61 [Oxytricha trifallax]
Length = 248
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/172 (39%), Positives = 112/172 (65%), Gaps = 7/172 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++G+SGVGK+ L+ +Y N F++ + TIG DF K + +D+++V LQIWDTAGQ
Sbjct: 32 LFKLLLIGNSGVGKSCLLLRYAENSFNENFFNTIGVDFKIKTIMLDEQIVKLQIWDTAGQ 91
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF++L S++YRGA ++VYDV + +FE+++ W E + A+ G C +L+GNK
Sbjct: 92 ERFRTLTSSYYRGAHGIIIVYDVTDRDSFENVRQWMHEIERFANAG---VCK-ILVGNKC 147
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
D + SR V ++ +E + IP+ ETSAK N++ +F+ ++ +N
Sbjct: 148 DME--ESRKVSHEEGMELAKHY-EIPFLETSAKNSINVETSFITMSNEIKRN 196
>gi|300120173|emb|CBK19727.2| unnamed protein product [Blastocystis hominis]
Length = 210
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 111/173 (64%), Gaps = 7/173 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
+K++++GDSGVGKT L+ QY F + + TIG DF K + + K V LQIWDTAGQE
Sbjct: 12 IKLLMIGDSGVGKTCLLMQYASKTFIKTFITTIGIDFKIKTVNVLGKTVKLQIWDTAGQE 71
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+++ +++ RG++ +LVYDV + +FES+ +W E+ + AD ++ +L+GNK D
Sbjct: 72 RFRTITTSYVRGSEGILLVYDVTDRNSFESISSWMEQISQHADSSVNK----ILIGNKCD 127
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
+ + + + L A R IP+ ETSA+ + N+DEAF+ +AE +K ++
Sbjct: 128 LEAQRAVSTEEGRKL---AERFGIPFAETSAQTNQNVDEAFMTLAEAVVKRKN 177
>gi|169866639|ref|XP_001839906.1| GTPase [Coprinopsis cinerea okayama7#130]
gi|116498990|gb|EAU81885.1| GTPase [Coprinopsis cinerea okayama7#130]
Length = 209
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 76/207 (36%), Positives = 120/207 (57%), Gaps = 15/207 (7%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ + +D K V QIWDTAGQ
Sbjct: 10 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSINVDGKTVKAQIWDTAGQ 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+ ++ W +E AD +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKHATYVNVTRWLKELRDHADSN----IVIMLVGNK- 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF--------LCVAEIALKN 183
+D R VP +A + G + + ETSA + N++ AF V+ +L++
Sbjct: 125 -SDLKHLRAVPTDEAKAFATENG-LSFIETSALDASNVESAFQTILTDIYRIVSAKSLES 182
Query: 184 EHKDIYYQPQGISETVSEVEQRGGCAC 210
+I QGIS T E +GG C
Sbjct: 183 SSTNIEPPTQGISVTAPEPADKGGKCC 209
>gi|422295322|gb|EKU22621.1| rab18 -family small gtpase, partial [Nannochloropsis gaditana
CCMP526]
Length = 244
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/173 (39%), Positives = 112/173 (64%), Gaps = 6/173 (3%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GD+GVGK+S++ ++ + F ++TIG DF K +++D K + + IWDTAG
Sbjct: 48 HLFKLLLIGDAGVGKSSILLRFTDDAFDDHQQSTIGVDFKVKMIEVDHKRIKMTIWDTAG 107
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF++L S++YRGA +LVYDVN +++FE+L +W +E + G E VL+GNK
Sbjct: 108 QERFRTLTSSYYRGAQGIILVYDVNRRESFENLNHWLQEVEVYSTGGGREIVK-VLVGNK 166
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+D + R+VP+++A W +G + + E SAK I + FL V + L N
Sbjct: 167 VDKE----RMVPREEAEAWARSKGML-FLEASAKTRTGIRQVFLEVVQKILDN 214
>gi|414873860|tpg|DAA52417.1| TPA: hypothetical protein ZEAMMB73_173009 [Zea mays]
Length = 234
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/169 (42%), Positives = 100/169 (59%), Gaps = 11/169 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N FS K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 19 LFKVVLVGDSGVGKSNLLSRFTRNAFSLDSKSTIGVEFATRTIQVDGKTIKAQIWDTAGQ 78
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFES W E AD +L+GNK
Sbjct: 79 ERYRAITSAYYRGAAGALLVYDVTRADTFESAARWLRELRDHADG---RGAAVMLVGNKT 135
Query: 132 DTDGGSS-------RVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D S R VP+ A A R + + ETSA + N+D AF
Sbjct: 136 DLARSGSRSRHHHPRAVPRGDAAA-LAEREGLSFVETSALDATNVDAAF 183
>gi|255634658|gb|ACU17691.1| unknown [Glycine max]
Length = 228
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/163 (41%), Positives = 106/163 (65%), Gaps = 7/163 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ K+++ GDSGVGK+ L+N++V N+F + K TIG +F+T+ + MD KLV QIWDTAGQ
Sbjct: 15 MFKIVMTGDSGVGKSQLLNRFVKNEFHMKSKPTIGMEFLTRTVVMDHKLVKAQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER+Q++ +A+YRGA +L YD+ Q+TF+ ++ W +E AD +L+GNK
Sbjct: 75 ERYQAITTAYYRGATGALLAYDITKQQTFDHVEKWLDELRIHADKN----ILVMLVGNK- 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+D S R VP + A ++ G + + ETSA + N++ AF+
Sbjct: 130 -SDLSSLRAVPTEVARDFAQQEG-LFFLETSALDSSNVESAFI 170
>gi|395532013|ref|XP_003768067.1| PREDICTED: ras-related protein Rab-13 [Sarcophilus harrisii]
Length = 195
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 113/177 (63%), Gaps = 16/177 (9%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHK 186
D + V +K A E I +FETSAK N+DEAF +A +I LK+ +
Sbjct: 123 CDME------VKRKLAREH-----GIRFFETSAKSSLNVDEAFSSLARDILLKSSRR 168
>gi|123506780|ref|XP_001329276.1| Ras family protein [Trichomonas vaginalis G3]
gi|62736244|gb|AAX97451.1| small Rab GTPase Rab6a [Trichomonas vaginalis]
gi|121912229|gb|EAY17053.1| Ras family protein [Trichomonas vaginalis G3]
Length = 202
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 73/211 (34%), Positives = 119/211 (56%), Gaps = 17/211 (8%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N+ K+I +GDS VGKTS++NQY+YN + QY +TIG D+++K + DK + LQI
Sbjct: 3 NITSTPFHKIIFIGDSSVGKTSIINQYIYNSCTPQYNSTIGIDYLSKIVNEADKPIQLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQE+F SL A+ R + VLVYD+ +++F+++Q W + + A+P F+
Sbjct: 63 WDTAGQEKFHSLIPAYIRSSTIAVLVYDITCKQSFDNIQTWYQMVINNAEPA------FI 116
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
++GNK D D + + + K A + N + ETSA NI + F + +I + E
Sbjct: 117 IVGNKSDLDSERANSIEEGKKF---ANQINAKFIETSAITSENISQLFDIIIQIPIPVE- 172
Query: 186 KDIYYQPQGISETV------SEVEQRGGCAC 210
++ + + + T+ ++ Q GC C
Sbjct: 173 -EVAQEEKQVMITIPSDKMDTKAPQNNGCGC 202
>gi|397626807|gb|EJK68249.1| hypothetical protein THAOC_10589 [Thalassiosira oceanica]
Length = 231
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/202 (36%), Positives = 124/202 (61%), Gaps = 10/202 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+SL+ ++ + +++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 37 LFKLLLIGDSGVGKSSLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 96
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV ++F +++ W E + A E +L+GNK
Sbjct: 97 ERFRTITSSYYRGAHGIIVVYDVTDNESFNNVKQWLHEIDRYA----AENVNKLLVGNKC 152
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA---EIALKNEHKDI 188
D +G RVV ++ E+ G I + ETSAK N+++AFL +A + +KN+
Sbjct: 153 DLEG--KRVVTTEQGKEFADGLG-IEFLETSAKTSTNVEQAFLTMASQIKARMKNQPSAA 209
Query: 189 YYQPQGISETVSEVEQRGGCAC 210
G++ +V++ GG C
Sbjct: 210 PATKPGVNLRSQQVKKEGGGCC 231
>gi|388497830|gb|AFK36981.1| unknown [Lotus japonicus]
Length = 217
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D R V A + A R N + ETSA E N+D AF V
Sbjct: 129 DLR--HLRAVSTDDA-KGFAERENTFFMETSALESLNVDNAFTEV 170
>gi|357474509|ref|XP_003607539.1| GTP-binding protein ras-like protein [Medicago truncatula]
gi|355508594|gb|AES89736.1| GTP-binding protein ras-like protein [Medicago truncatula]
Length = 217
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N+D +F
Sbjct: 129 DLRHLRAVSTDDAKAF---AERENTFFMETSALESLNVDNSF 167
>gi|189217748|ref|NP_001121315.1| uncharacterized protein LOC100158399 [Xenopus laevis]
gi|115528810|gb|AAI24979.1| LOC100158399 protein [Xenopus laevis]
Length = 201
Score = 137 bits (344), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 68/167 (40%), Positives = 110/167 (65%), Gaps = 7/167 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + +++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ ++++E++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENASAGVER----MLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + + R VP+++ E A I +FETSAK N+DE+F +A
Sbjct: 123 CDME--NKRKVPKERG-EKLAKEHGIRFFETSAKSSLNVDESFNTLA 166
>gi|63102287|gb|AAH94846.1| RAB13 protein, partial [Homo sapiens]
Length = 244
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 48 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 107
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 108 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNK 163
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 164 CDME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 214
>gi|21536533|gb|AAM60865.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
Length = 216
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 109/174 (62%), Gaps = 10/174 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++ + N+FS + K+TIG +F T+ L +DDK++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSLFTKNEFSLESKSTIGVEFATRSLNVDDKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVETWLKELRNHTDPN----IVVMLVGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
D V Q + + A + ++ + ETSA E N++ AF AE+ + H
Sbjct: 129 DL---RHLVAVQTEDAKSFAEKESLYFMETSAFEATNVENAF---AEVLTQIHH 176
>gi|357440489|ref|XP_003590522.1| Ras-like protein [Medicago truncatula]
gi|355479570|gb|AES60773.1| Ras-like protein [Medicago truncatula]
gi|388512621|gb|AFK44372.1| unknown [Medicago truncatula]
Length = 216
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 9/199 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N+DE F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVDEVFFSIARDIKQRLAESDSKT 188
Query: 191 QPQGISETVSEVEQRGGCA 209
+PQ + +++ +Q G A
Sbjct: 189 EPQTLK--INQPDQGAGSA 205
>gi|66472490|ref|NP_001018466.1| ras-related protein Rab-12 [Danio rerio]
gi|63100845|gb|AAH95608.1| Zgc:111945 [Danio rerio]
gi|182889626|gb|AAI65429.1| Zgc:111945 protein [Danio rerio]
Length = 235
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 103/162 (63%), Gaps = 6/162 (3%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
L+VI++G GVGKTSLM ++ + F + K+T+G DF K +++ K + LQIWDTAGQE
Sbjct: 36 LQVIIIGSRGVGKTSLMERFTDDTFCEACKSTVGVDFKIKTVELRGKKIRLQIWDTAGQE 95
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF S+ SA+YRGA VLVYD+ Q+TFE L W +K D E +L+GNK+D
Sbjct: 96 RFNSITSAYYRGAKGIVLVYDITKQETFEDLPKW----MKMIDKYASEDAELLLVGNKLD 151
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL 174
+ S R + +++A + + + + E SAK++ N+DE FL
Sbjct: 152 CE--SDRAISRQQAERFASRISGMRFCEASAKDNFNVDEIFL 191
>gi|145483363|ref|XP_001427704.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834296|emb|CAI44508.1| rab_C23 [Paramecium tetraurelia]
gi|124394787|emb|CAK60306.1| unnamed protein product [Paramecium tetraurelia]
Length = 204
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 77/202 (38%), Positives = 123/202 (60%), Gaps = 11/202 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGKT L+ +Y N F+ + TIG DF K +++ K V +QIWDTAGQ
Sbjct: 11 LVKLLIIGDSGVGKTCLLMRYCENLFTNNHLTTIGIDFKLKTIEVGGKKVKIQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +Y+GA +LVY V+ + +F+S++NW +KQ + E +L+ NK
Sbjct: 71 ERFRTITQTYYKGAQGIILVYGVDDRVSFQSIENW----MKQINTHAQEGVSKLLVANKS 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV Q + + A + IP+FETSAK NI E F +A++ + ++KD +
Sbjct: 127 DC---ADRVV-QTQEGQRLADQYGIPFFETSAKNGTNIYEIFNSIAKMVIDKQNKDPLDR 182
Query: 192 PQGI---SETVSEVEQRGGCAC 210
P + + SEV+++ G C
Sbjct: 183 PSNVQLSQQPQSEVQKKQGGCC 204
>gi|308321720|gb|ADO28003.1| ras-related protein rab-10 [Ictalurus furcatus]
Length = 200
Score = 136 bits (343), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 80/198 (40%), Positives = 122/198 (61%), Gaps = 13/198 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K ++++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ + +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGILLVYDITNAKSFENISKW----LRNIEEHANEDVEKMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV + K E A NI +FETSAK + NI++AFL +AE L HK +
Sbjct: 125 DME--DVRVVSKAKG-EQIASEHNIRFFETSAKANINIEKAFLTLAEDIL---HKTPGKE 178
Query: 192 PQGISETVSEVEQRGGCA 209
P +E V +V R G +
Sbjct: 179 PT--NENV-DVNNRSGSS 193
>gi|290982368|ref|XP_002673902.1| rab family small GTPase [Naegleria gruberi]
gi|284087489|gb|EFC41158.1| rab family small GTPase [Naegleria gruberi]
Length = 203
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/201 (38%), Positives = 124/201 (61%), Gaps = 11/201 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + ++ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTDSYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q +F +++ W E + A ++ +L+GNK
Sbjct: 68 ERFRTMTSSYYRGAHGIIIVYDVTDQDSFSNVKQWLSEIDRYASDNVNK----LLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
D S + V + A E+ A NIP+ ETSAK N+++AF+ + AEI + + I
Sbjct: 124 DLT--SKKQVDRSTAEEF-AKSLNIPFLETSAKISTNVEQAFMTMAAEIKNRLASQPITT 180
Query: 191 QPQ---GISETVSEVEQRGGC 208
Q Q GI+ S+ + GGC
Sbjct: 181 QQQPSLGITPAPSKPQSNGGC 201
>gi|255076991|ref|XP_002502151.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
gi|226517416|gb|ACO63409.1| ras-related gtp-binding protein [Micromonas sp. RCC299]
Length = 202
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/169 (40%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L+K++++GDSGVGK+ L+ ++ ++F+ + TIG DF + +++D K V LQIWDTAG
Sbjct: 10 HLIKLLLIGDSGVGKSCLLLRFSEDQFTSSFITTIGIDFKIRTVELDGKRVKLQIWDTAG 69
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +L YDV + +F +++NW + A G + VL+GNK
Sbjct: 70 QERFRTITNAYYRGAHGILLTYDVTDEGSFNNVRNWMRNIEQHASDGVSK----VLVGNK 125
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
D + RV+ ++ E A IP+FETSAK + N+++AF +A I
Sbjct: 126 SDAE--EKRVISTEQG-EALAKEFGIPFFETSAKANTNVNDAFFAIARI 171
>gi|74833846|emb|CAI39376.1| rab_A02 [Paramecium tetraurelia]
Length = 201
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/200 (40%), Positives = 120/200 (60%), Gaps = 10/200 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++G+SGVGK+SL+ ++ + FS Y TIG DF K L++D K V LQIWDTAGQ
Sbjct: 8 LFKLVIVGNSGVGKSSLLLRFSDDTFSDSYLTTIGVDFRFKTLEIDGKKVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ SA+Y+GAD VLVYDV+ TFE + + ++ + D + +LLGNK
Sbjct: 68 ERFRTITSAYYKGADGIVLVYDVSSLATFEDIDKF---WINEVDSYAEKNVELLLLGNKS 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE--IALKNEHKDIY 189
D + +VV +KAL++ R + + E SAK + +AFL +A IA K+
Sbjct: 125 DIE---EKVVTTQKALDYAGIR-KMAHMEVSAKTADQVSKAFLSLARKLIAKKDSQGSKG 180
Query: 190 YQPQGISETVSE-VEQRGGC 208
PQ +T + + Q+ GC
Sbjct: 181 SGPQKTQQTPGQKIGQQKGC 200
>gi|93279476|pdb|2F9L|A Chain A, 3d Structure Of Inactive Human Rab11b Gtpase
gi|93279477|pdb|2F9M|A Chain A, 3d Structure Of Active Human Rab11b Gtpase
Length = 199
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 5 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 64
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++ + SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 65 ERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 119
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 120 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 159
>gi|255554684|ref|XP_002518380.1| protein with unknown function [Ricinus communis]
gi|223542475|gb|EEF44016.1| protein with unknown function [Ricinus communis]
Length = 215
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +++DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRGHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N++ AF
Sbjct: 129 DLRHLRAVSTEDAKAF---AERENTFFMETSALESMNVENAF 167
>gi|224079047|ref|XP_002305729.1| predicted protein [Populus trichocarpa]
gi|222848693|gb|EEE86240.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +D K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLIGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + K+ A R ++ + ETSA E N+D AF
Sbjct: 129 DLRHLVAVSTEDGKSF---AERESLYFMETSALEATNVDNAF 167
>gi|194741692|ref|XP_001953321.1| GF17263 [Drosophila ananassae]
gi|190626380|gb|EDV41904.1| GF17263 [Drosophila ananassae]
Length = 205
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 80/217 (36%), Positives = 127/217 (58%), Gaps = 27/217 (12%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
SVN + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD Q++F +++ W EE E AC
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEI-------ERYACE 115
Query: 124 FV---LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
V L+GNK +D + +VV A E+ A G IP+ ETSAK N+++AF+ +A
Sbjct: 116 NVNKLLVGNK--SDLTTKKVVDHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAA-- 170
Query: 181 LKNEHKDIYYQPQGISETVSEVE---------QRGGC 208
E K+ P ++ S+V+ R GC
Sbjct: 171 ---EIKNRVGPPSSATDNASKVKIDQGRPVENTRSGC 204
>gi|158343285|gb|ABW35315.1| Rab1A1 [Gymnochlora stellata]
gi|193875838|gb|ACF24555.1| Ras-related small GTPase Rab 1a [Gymnochlora stellata]
Length = 207
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 15/201 (7%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + F+ Y +TIG DF + L+++ K V LQIWDTAGQ
Sbjct: 16 LFKLVLIGDSGVGKSCLLLRFADDSFTDSYISTIGVDFRFRTLKINKKTVKLQIWDTAGQ 75
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ SA+YRGAD ++VYDV ++FE + W L + D HE +L+GNK
Sbjct: 76 ERFRTITSAYYRGADGIIMVYDVTSLESFEHVDEW----LNEVDRFAHENTCKLLVGNKA 131
Query: 132 D-TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE---IALKNEHKD 187
D TD R V ++ A A R +I + ETSAK N+ AF +AE LKN K
Sbjct: 132 DLTD---DRKVSEESA-RALAQRLHIQFLETSAKTSTNVTTAFSLMAEELIATLKNVRKS 187
Query: 188 IYYQPQGISETVSEVEQRGGC 208
+++ S E++ GC
Sbjct: 188 ---GTADVAKLSSTQEEKKGC 205
>gi|24648682|ref|NP_732610.1| Rab1 [Drosophila melanogaster]
gi|194899532|ref|XP_001979313.1| GG14761 [Drosophila erecta]
gi|195355524|ref|XP_002044241.1| GM15089 [Drosophila sechellia]
gi|195498456|ref|XP_002096531.1| Rab1 [Drosophila yakuba]
gi|195569217|ref|XP_002102607.1| GD19996 [Drosophila simulans]
gi|2313033|dbj|BAA21705.1| rab1 [Drosophila melanogaster]
gi|7300727|gb|AAF55873.1| Rab1 [Drosophila melanogaster]
gi|190651016|gb|EDV48271.1| GG14761 [Drosophila erecta]
gi|194129542|gb|EDW51585.1| GM15089 [Drosophila sechellia]
gi|194182632|gb|EDW96243.1| Rab1 [Drosophila yakuba]
gi|194198534|gb|EDX12110.1| GD19996 [Drosophila simulans]
gi|209417952|gb|ACI46514.1| FI01544p [Drosophila melanogaster]
Length = 205
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 124/203 (61%), Gaps = 18/203 (8%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
SVN + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD Q++F +++ W EE E AC
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEI-------ERYACE 115
Query: 124 FV---LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
V L+GNK +D + +VV A E+ A G IP+ ETSAK N+++AF+ +A
Sbjct: 116 NVNKLLVGNK--SDLTTKKVVDHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAA-- 170
Query: 181 LKNEHKDIYYQPQGISETVSEVE 203
E K+ P ++ S+V+
Sbjct: 171 ---EIKNRVGPPSSATDNASKVK 190
>gi|118484551|gb|ABK94149.1| unknown [Populus trichocarpa]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +D K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDSKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLIGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + K+ A R ++ + ETSA E N+D AF
Sbjct: 129 DLRHLVAVSTEDGKSF---AERESLYFMETSALEATNVDNAF 167
>gi|50540176|ref|NP_001002555.1| ras-related protein Rab-11B [Danio rerio]
gi|326665348|ref|XP_003198017.1| PREDICTED: ras-related protein Rab-11B-like isoform 1 [Danio rerio]
gi|326665350|ref|XP_003198018.1| PREDICTED: ras-related protein Rab-11B-like isoform 2 [Danio rerio]
gi|49904559|gb|AAH76247.1| Zgc:92772 [Danio rerio]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|388506382|gb|AFK41257.1| unknown [Lotus japonicus]
Length = 216
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 16 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 75
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 76 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNK----ILVGNKA 131
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N++E F +A +I K D
Sbjct: 132 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQKLADTDSRA 189
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I + GG A
Sbjct: 190 EPQTIQINQPDASASGGQAA 209
>gi|6679583|ref|NP_033023.1| ras-related protein Rab-11B [Mus musculus]
gi|1172815|sp|P46638.3|RB11B_MOUSE RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|433064|gb|AAC42093.1| Rab11b [Mus musculus]
gi|27502091|gb|AAO17377.1| RAB11B protein [Mus musculus]
gi|32493335|gb|AAH54753.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|55391484|gb|AAH85270.1| RAB11B, member RAS oncogene family [Mus musculus]
gi|74138737|dbj|BAE27183.1| unnamed protein product [Mus musculus]
gi|74138750|dbj|BAE27188.1| unnamed protein product [Mus musculus]
gi|74144654|dbj|BAE27312.1| unnamed protein product [Mus musculus]
gi|74147424|dbj|BAE27582.1| unnamed protein product [Mus musculus]
gi|74151060|dbj|BAE27658.1| unnamed protein product [Mus musculus]
gi|74195098|dbj|BAE28293.1| unnamed protein product [Mus musculus]
gi|74195236|dbj|BAE28347.1| unnamed protein product [Mus musculus]
gi|112292981|dbj|BAF02868.1| Rab11B [Mus musculus]
gi|148678259|gb|EDL10206.1| mCG22989, isoform CRA_b [Mus musculus]
gi|187957168|gb|AAI57917.1| RAB11B, member RAS oncogene family [Mus musculus]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|125773595|ref|XP_001358056.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|195166166|ref|XP_002023906.1| GL27164 [Drosophila persimilis]
gi|54637791|gb|EAL27193.1| GA17362 [Drosophila pseudoobscura pseudoobscura]
gi|194106066|gb|EDW28109.1| GL27164 [Drosophila persimilis]
Length = 205
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 77/203 (37%), Positives = 124/203 (61%), Gaps = 18/203 (8%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
SVN + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SVNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD Q++F +++ W EE E AC
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEI-------ERYACE 115
Query: 124 FV---LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
V L+GNK +D + +VV A E+ A G IP+ ETSAK N+++AF+ +A
Sbjct: 116 NVNKLLVGNK--SDLTTKKVVDHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAA-- 170
Query: 181 LKNEHKDIYYQPQGISETVSEVE 203
E K+ P ++ S+V+
Sbjct: 171 ---EIKNRVGPPSSATDNASKVK 190
>gi|388499200|gb|AFK37666.1| unknown [Lotus japonicus]
Length = 216
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 9/199 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N+DE F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVDEVFFSIARDIKQRVADNDSKA 188
Query: 191 QPQGISETVSEVEQRGGCA 209
+PQ + +++ +Q G A
Sbjct: 189 EPQTLK--INQPDQGAGSA 205
>gi|871510|emb|CAA90080.1| small GTP-binding protein [Pisum sativum]
Length = 216
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 75/199 (37%), Positives = 119/199 (59%), Gaps = 9/199 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIKNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N+DE F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVDEVFFSIARDIKQRLAETDSKT 188
Query: 191 QPQGISETVSEVEQRGGCA 209
+PQ + +++ +Q G A
Sbjct: 189 EPQTLK--INQPDQGAGSA 205
>gi|323453211|gb|EGB09083.1| hypothetical protein AURANDRAFT_24921 [Aureococcus anophagefferens]
Length = 214
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 85/191 (44%), Positives = 115/191 (60%), Gaps = 5/191 (2%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
LLK +VLG S VGKTSL+ Q+V+ KF+ + T GADF +K L + D+ V L IWDTAG
Sbjct: 9 TLLKCVVLGSSNVGKTSLLMQFVHGKFTPARRVTTGADFASKVLHLGDREVRLVIWDTAG 68
Query: 71 QERFQ--SLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
QERF +LG AFYRGAD +LVYD +TFE ++ WR E L++ D G E P V++G
Sbjct: 69 QERFHHGTLGGAFYRGADAALLVYDTTDIRTFEQIEMWRRELLQRID-GPPEEFPVVVVG 127
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
NK+D +R Q + WC G I TSAK+ + A VA +AL+N+ +
Sbjct: 128 NKVDVP-NKTREHEQAAVVRWCRDLG-IGLCLTSAKDGTGVAVAMEAVAMLALENKRRRQ 185
Query: 189 YYQPQGISETV 199
+P+ +TV
Sbjct: 186 AAEPEQKRQTV 196
>gi|116791471|gb|ABK25992.1| unknown [Picea sitchensis]
Length = 217
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK++ QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSITVDDKVIKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R N + ETSA E N++ AF
Sbjct: 128 DLRHLRAVSIEDGKAF---AERENTYFMETSALESTNVENAF 166
>gi|297793649|ref|XP_002864709.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
gi|297310544|gb|EFH40968.1| hypothetical protein ARALYDRAFT_919325 [Arabidopsis lyrata subsp.
lyrata]
Length = 217
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+L+ W +E D + +GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENLERWLKELRDHTDSN----IVIMFVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N++ AF
Sbjct: 129 DLRHLRAVSTEDAKAF---AERENTFFMETSALESMNVENAF 167
>gi|187607443|ref|NP_001120303.1| uncharacterized protein LOC100145363 [Xenopus (Silurana)
tropicalis]
gi|156914717|gb|AAI52631.1| Zgc:92772 protein [Danio rerio]
gi|169642085|gb|AAI60799.1| LOC100145363 protein [Xenopus (Silurana) tropicalis]
Length = 218
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|117939039|dbj|BAF36673.1| Small G Protein RAB [Pyrsonympha grandis]
Length = 200
Score = 136 bits (343), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 67/169 (39%), Positives = 110/169 (65%), Gaps = 7/169 (4%)
Query: 15 VIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQERF 74
++++GDSGVGK++L+ +Y N+F+ + K+TIG +F T+ +Q D+K + QIWDTAGQ+R+
Sbjct: 1 IVLIGDSGVGKSNLLLRYTKNEFNLESKSTIGVEFATRSIQFDNKTIKAQIWDTAGQDRY 60
Query: 75 QSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDTD 134
+++ SA+YRGA +LVYD++ T+E++ W +E ADP + +L+GNK +D
Sbjct: 61 RAITSAYYRGAVGALLVYDISKHATYENVDKWLKELRDHADP----SIVIMLVGNK--SD 114
Query: 135 GGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
R VP ++A + A R N+ + ETSA N++ AF + + KN
Sbjct: 115 LRHLRNVPTEEAKNF-AQRNNLSFIETSALHSTNVETAFHTILQEIYKN 162
>gi|291220707|ref|XP_002730366.1| PREDICTED: RAB10, member RAS oncogene family-like [Saccoglossus
kowalevskii]
Length = 200
Score = 136 bits (342), Expect = 5e-30, Method: Compositional matrix adjust.
Identities = 73/198 (36%), Positives = 118/198 (59%), Gaps = 8/198 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ KTF+++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITQPKTFDNITKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE-IALKNEHKDIYY 190
D + R++P+++ E A I + ETSAK + N+++AF+ +AE I K KD
Sbjct: 125 DME--DKRMIPKERG-ESIAREHGIKFLETSAKSNVNVEKAFMTLAEDILRKTPQKDSNP 181
Query: 191 QPQGISETVSEVEQRGGC 208
+S ++ GC
Sbjct: 182 DSSSVSVHKETSSRKSGC 199
>gi|385303857|gb|EIF47907.1| member ras oncogene family [Dekkera bruxellensis AWRI1499]
Length = 202
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/168 (41%), Positives = 111/168 (66%), Gaps = 9/168 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ N ++Q Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFAENTYTQDYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F + W +E + A G + +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIIVYDVTDQESFNDVNQWLQEIDRYATSGVQK----LLVGNKC 123
Query: 132 D-TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D TD +VV A E+ RG IP+ ETSA E N+++AF+ +++
Sbjct: 124 DLTD---KKVVDYAVAKEFADSRG-IPFIETSAAESTNVEQAFILMSK 167
>gi|410950267|ref|XP_003981831.1| PREDICTED: ras-related protein Rab-11B [Felis catus]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|351701311|gb|EHB04230.1| Ras-related protein Rab-11B [Heterocephalus glaber]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|348527516|ref|XP_003451265.1| PREDICTED: ras-related protein Rab-25-like [Oreochromis niloticus]
Length = 207
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 69/184 (37%), Positives = 117/184 (63%), Gaps = 8/184 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++G+SGVGK++L++++ N+F+ + TIG +F T+ +Q+++ + QIWDTAG
Sbjct: 10 VFKVVLIGESGVGKSNLLSRFTKNEFNHDSRTTIGVEFSTRTVQLNNFTIKAQIWDTAGL 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+ES++ W +E + ADP +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDITKHLTYESVERWLKELYEHADPH----IVVMLIGNKS 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
D + S R VP ++A ++ +G + + ETSA + N++ AF V AEI K K++
Sbjct: 126 DLE--SERSVPTEEAKDFAEKKG-LLFLETSALDSTNVEAAFTTVLAEIHKKVSSKEVVR 182
Query: 191 QPQG 194
P
Sbjct: 183 GPMS 186
>gi|148342496|gb|ABQ59034.1| RAB11B protein [Homo sapiens]
gi|254071179|gb|ACT64349.1| RAB11B, member RAS oncogene family protein [synthetic construct]
gi|254071181|gb|ACT64350.1| RAB11B, member RAS oncogene family protein [synthetic construct]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|14249144|ref|NP_116006.1| ras-related protein Rab-11B [Rattus norvegicus]
gi|78369332|ref|NP_001030468.1| ras-related protein Rab-11B [Bos taurus]
gi|190358517|ref|NP_004209.2| ras-related protein Rab-11B [Homo sapiens]
gi|226529709|ref|NP_001142168.1| uncharacterized protein LOC100274335 [Zea mays]
gi|349585085|ref|NP_001231804.1| RAB11B, member RAS oncogene family [Sus scrofa]
gi|387762845|ref|NP_001248413.1| ras-related protein Rab-11B [Macaca mulatta]
gi|297703412|ref|XP_002828633.1| PREDICTED: ras-related protein Rab-11B [Pongo abelii]
gi|332264185|ref|XP_003281127.1| PREDICTED: ras-related protein Rab-11B isoform 1 [Nomascus
leucogenys]
gi|332852540|ref|XP_001147785.2| PREDICTED: ras-related protein Rab-11B [Pan troglodytes]
gi|344299320|ref|XP_003421334.1| PREDICTED: ras-related protein Rab-11B-like [Loxodonta africana]
gi|345786671|ref|XP_854399.2| PREDICTED: ras-related protein Rab-11B [Canis lupus familiaris]
gi|354496877|ref|XP_003510550.1| PREDICTED: ras-related protein Rab-11B-like [Cricetulus griseus]
gi|397477329|ref|XP_003810025.1| PREDICTED: ras-related protein Rab-11B [Pan paniscus]
gi|402904037|ref|XP_003914857.1| PREDICTED: ras-related protein Rab-11B [Papio anubis]
gi|403296089|ref|XP_003938953.1| PREDICTED: ras-related protein Rab-11B [Saimiri boliviensis
boliviensis]
gi|426229069|ref|XP_004008616.1| PREDICTED: ras-related protein Rab-11B [Ovis aries]
gi|426387018|ref|XP_004059975.1| PREDICTED: ras-related protein Rab-11B [Gorilla gorilla gorilla]
gi|38258938|sp|Q15907.4|RB11B_HUMAN RecName: Full=Ras-related protein Rab-11B; AltName:
Full=GTP-binding protein YPT3; Flags: Precursor
gi|50403673|sp|O35509.4|RB11B_RAT RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|108860922|sp|Q3MHP2.3|RB11B_BOVIN RecName: Full=Ras-related protein Rab-11B; Flags: Precursor
gi|9837357|gb|AAG00542.1|AF286534_1 GTP-binding protein RAB11B [Rattus norvegicus]
gi|20379070|gb|AAM21095.1|AF498947_1 small GTP binding protein RAB11B [Homo sapiens]
gi|38303833|gb|AAH62041.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|54695942|gb|AAV38343.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|61355645|gb|AAX41161.1| RAB11B member RAS oncogene family [synthetic construct]
gi|75773827|gb|AAI05163.1| RAB11B, member RAS oncogene family [Bos taurus]
gi|82414868|gb|AAI10082.1| RAB11B, member RAS oncogene family [Homo sapiens]
gi|90085246|dbj|BAE91364.1| unnamed protein product [Macaca fascicularis]
gi|119589331|gb|EAW68925.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|119589333|gb|EAW68927.1| RAB11B, member RAS oncogene family, isoform CRA_a [Homo sapiens]
gi|149031659|gb|EDL86622.1| RAB11B, member RAS oncogene family [Rattus norvegicus]
gi|189066581|dbj|BAG35831.1| unnamed protein product [Homo sapiens]
gi|194707448|gb|ACF87808.1| unknown [Zea mays]
gi|296485751|tpg|DAA27866.1| TPA: ras-related protein Rab-11B [Bos taurus]
gi|307686193|dbj|BAJ21027.1| RAB11B, member RAS oncogene family [synthetic construct]
gi|344244036|gb|EGW00140.1| Ras-related protein Rab-11B [Cricetulus griseus]
gi|380817956|gb|AFE80852.1| ras-related protein Rab-11B [Macaca mulatta]
gi|383422851|gb|AFH34639.1| ras-related protein Rab-11B [Macaca mulatta]
gi|385281372|gb|AFI57838.1| ras-related protein Rab-11B [Capra hircus]
gi|410217180|gb|JAA05809.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410217182|gb|JAA05810.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410257678|gb|JAA16806.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410301334|gb|JAA29267.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|410337015|gb|JAA37454.1| RAB11B, member RAS oncogene family [Pan troglodytes]
gi|432104449|gb|ELK31073.1| Ras-related protein Rab-11B [Myotis davidii]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|159906375|gb|ABX10876.1| RAB11B [Capra hircus]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|440910197|gb|ELR60022.1| Ras-related protein Rab-11B, partial [Bos grunniens mutus]
Length = 225
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 18 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 77
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 78 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 132
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 133 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 172
>gi|300121600|emb|CBK22118.2| unnamed protein product [Blastocystis hominis]
Length = 182
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 111/172 (64%), Gaps = 7/172 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ K++++GDSGVGK+SL+ ++ F++ + +TIG DF + +++ DK V LQIWDTAGQ
Sbjct: 17 MFKIVLVGDSGVGKSSLLLRFADGAFTESFISTIGVDFRFRTVEVLDKSVKLQIWDTAGQ 76
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ SA+Y+GAD ++VYDV +TF+ +++W +E K DPG P ++GNK
Sbjct: 77 ERFRTITSAYYKGADGIMIVYDVTDTETFKDMEDWHKEIQKFTDPG----IPICIIGNK- 131
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKN 183
+D + V E+ A N + ETSAK+ N++ AFL +AE +K
Sbjct: 132 -SDLTEKKEVAAAVGKEY-ASSLNASFCETSAKDASNVETAFLQIAEAMVKR 181
>gi|58332330|ref|NP_001011048.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|148237448|ref|NP_001087959.1| uncharacterized protein LOC494642 [Xenopus laevis]
gi|52078458|gb|AAH82421.1| LOC494642 protein [Xenopus laevis]
gi|54037941|gb|AAH84173.1| RAB11B, member RAS oncogene family, gene 1 [Xenopus (Silurana)
tropicalis]
gi|89267988|emb|CAJ81987.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
gi|89271367|emb|CAJ83815.1| RAB11B, member RAS oncogene family [Xenopus (Silurana) tropicalis]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|123471850|ref|XP_001319122.1| small GTP-binding protein [Trichomonas vaginalis G3]
gi|121901898|gb|EAY06899.1| small GTP-binding protein, putative [Trichomonas vaginalis G3]
Length = 194
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 76/200 (38%), Positives = 119/200 (59%), Gaps = 15/200 (7%)
Query: 14 KVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQER 73
K+IV+GDS VGKTS++++YV +F ATIG D+ K+++++ + + LQIWDT GQE+
Sbjct: 7 KIIVVGDSSVGKTSVIHRYVKGEFDSTIIATIGIDYRAKDIEINGQKIKLQIWDTIGQEK 66
Query: 74 FQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKIDT 133
++SL ++R AD +L YD V+ +F LQNW + + A + P +L+GNK+D
Sbjct: 67 YRSLAPQYFRRADGVILFYDTTVKTSFTHLQNWLDSIINNA----QSSIPVILVGNKVDL 122
Query: 134 DGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQPQ 193
VVP++ A+++ A + F SAK NID+ F +AE+ L +H QPQ
Sbjct: 123 ----PEVVPKEHAIDF-ARDKKLELFFCSAKSGDNIDQIFNRIAELTL--QHTVEQDQPQ 175
Query: 194 G---ISETVSEVEQRGGCAC 210
+ ET E +++ GC C
Sbjct: 176 NVVTVKETTPE-DKKNGCHC 194
>gi|60302752|ref|NP_001012569.1| ras-related protein Rab-11B [Gallus gallus]
gi|224087229|ref|XP_002190133.1| PREDICTED: ras-related protein Rab-11B [Taeniopygia guttata]
gi|60098771|emb|CAH65216.1| hypothetical protein RCJMB04_8i9 [Gallus gallus]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|145510136|ref|XP_001441001.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|74834514|emb|CAI44569.1| rab_A27 [Paramecium tetraurelia]
gi|124408240|emb|CAK73604.1| unnamed protein product [Paramecium tetraurelia]
Length = 205
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 75/202 (37%), Positives = 121/202 (59%), Gaps = 13/202 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT+++NQ+ +F Q K TIG +F +K + +DDK + QIWDTAGQ
Sbjct: 11 LYKLVLIGDSGVGKTNILNQFTRGEFLQDSKTTIGVEFASKNVILDDKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +++YD+ TFE++ W +E + ADP + +++GNK
Sbjct: 71 ERYRAITSAYYRGAVGAMIIYDITKSLTFENVDKWMKELKENADP----SLQIMIVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
TD R V A+ + A R + + ETSAK+ N+++AF + + K+ K +
Sbjct: 126 -TDQKHIRQVATDCAIAY-AQRNGVAFIETSAKDGTNVEDAFKNILQQIYKSA-KVVKPT 182
Query: 192 PQGISETVSEV-----EQRGGC 208
PQ V++ E+ GC
Sbjct: 183 PQPTKFVVADTDVVKPEKSSGC 204
>gi|308322801|gb|ADO28538.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 136 bits (342), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSANVEEAF 165
>gi|344264823|ref|XP_003404489.1| PREDICTED: ras-related protein Rab-32-like [Loxodonta africana]
Length = 225
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/177 (41%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D K LV LQ+WD
Sbjct: 22 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSKTLVRLQLWD 81
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+D++ TFE++ W+ + + P VLL
Sbjct: 82 IAGQERFGNMTRVYYKEALGAFIVFDISRSSTFEAVLKWKNDLDSKVHLPNGSPIPAVLL 141
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D S + PQ ++C G +FETSAK++ NIDEA + E L N
Sbjct: 142 ANKCDQKKESGQSPPQMD--QFCKEHGFSGWFETSAKDNINIDEAARFLVENILANH 196
>gi|224116798|ref|XP_002317396.1| predicted protein [Populus trichocarpa]
gi|222860461|gb|EEE98008.1| predicted protein [Populus trichocarpa]
Length = 218
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +D K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLIGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + K+ A R ++ + ETSA E N+D AF
Sbjct: 129 DLRHLVAVSTEDGKSF---AERESLYFMETSALEATNVDSAF 167
>gi|57525915|ref|NP_001003548.1| ras-related protein Rab-35 [Danio rerio]
gi|50418486|gb|AAH77124.1| RAB35, member RAS oncogene family [Danio rerio]
Length = 201
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/178 (39%), Positives = 113/178 (63%), Gaps = 8/178 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVELNGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG V+VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVVVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDI 188
D +S+VV A ++ G I FETSAKE+ N++E F C+ E+ L+ + + +
Sbjct: 122 --NDDPNSKVVETNDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLRAKKESV 176
>gi|147788245|emb|CAN75965.1| hypothetical protein VITISV_014527 [Vitis vinifera]
Length = 217
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +++DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSH----IVIMLVGNKG 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + KA A R N + ETSA E N++ AF
Sbjct: 129 DLRHLXAVSIDDAKAF---AERENTFFMETSALESMNVENAF 167
>gi|131849|sp|P22129.1|RB11B_DISOM RecName: Full=Ras-related protein Rab-11B; AltName: Full=ORA3;
Flags: Precursor
gi|213121|gb|AAA49233.1| GTP-binding protein [Discopyge ommata]
Length = 218
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|226492597|ref|NP_001140635.1| uncharacterized protein LOC100272710 [Zea mays]
gi|194700274|gb|ACF84221.1| unknown [Zea mays]
Length = 216
Score = 136 bits (342), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 104/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYDV TFE+++ W E D +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDAN----IVIMLVGNKA 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R VP + A + A R N + ETSA E N++ AF
Sbjct: 128 DLR--HLRAVPTEDAKAF-AERENAFFMETSALEAMNVEGAF 166
>gi|47216427|emb|CAG01978.1| unnamed protein product [Tetraodon nigroviridis]
Length = 218
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|255563016|ref|XP_002522512.1| protein with unknown function [Ricinus communis]
gi|223538203|gb|EEF39812.1| protein with unknown function [Ricinus communis]
Length = 217
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + + A A R N + ETSA E N++ AF
Sbjct: 129 DLRHLRAITIEDATAF---AQRQNTFFMETSALESMNVENAF 167
>gi|226509624|ref|NP_001151123.1| ras-related protein Rab11B [Zea mays]
gi|195644454|gb|ACG41695.1| ras-related protein Rab11B [Zea mays]
gi|223972799|gb|ACN30587.1| unknown [Zea mays]
gi|413946523|gb|AFW79172.1| Ras protein Rab11B [Zea mays]
Length = 216
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 106/165 (64%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + ++DK+V QIWDTAGQ
Sbjct: 12 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVEDKVVKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA ++VYDV TFE+++ W E D +L+GNK
Sbjct: 72 ERYRAITSAYYRGAVGALVVYDVTRHVTFENVERWMRELRDHTDAN----IVMMLVGNKA 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D R VP + A + A R N + ETSA E N+++AF V
Sbjct: 128 DLR--HLRAVPTEDAKAF-AERQNAFFMETSALEAMNVEDAFTEV 169
>gi|71895797|ref|NP_001025679.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
gi|62530960|gb|AAH93468.1| MGC97787 protein [Xenopus (Silurana) tropicalis]
Length = 201
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 110/167 (65%), Gaps = 7/167 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + +++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIVRFSEDSFNSTYISTIGIDFKIRTTEIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ ++++E++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDERSYENIQNWMKSIKENAAAGVER----MLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + + R VP+++ E A I +FETSAK N+DEAF +A
Sbjct: 123 CDME--NKRKVPKERG-EKLAKEHGIRFFETSAKSSQNVDEAFNTLA 166
>gi|224100931|ref|XP_002312073.1| predicted protein [Populus trichocarpa]
gi|118486181|gb|ABK94933.1| unknown [Populus trichocarpa]
gi|222851893|gb|EEE89440.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRISETDSRA 188
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I + GG A
Sbjct: 189 EPQTIKINQPDPSASGGQAA 208
>gi|49456343|emb|CAG46492.1| RAB11B [Homo sapiens]
Length = 218
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|356548648|ref|XP_003542712.1| PREDICTED: ras-related protein RABA1f-like [Glycine max]
Length = 217
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 70/162 (43%), Positives = 105/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +++DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVVMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V + A + A R N + ETSA E N++ AF
Sbjct: 129 DLR--HLRAVSTEDARTF-AERENTFFMETSALESLNVENAF 167
>gi|348500484|ref|XP_003437803.1| PREDICTED: ras-related protein Rab-11B-like [Oreochromis niloticus]
gi|410924493|ref|XP_003975716.1| PREDICTED: ras-related protein Rab-11B-like [Takifugu rubripes]
Length = 218
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|60833728|gb|AAX37062.1| RAB11B member RAS oncogene family [synthetic construct]
Length = 219
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|221219526|gb|ACM08424.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + +I++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANVSIEKAFLTLAEDILR 172
>gi|255581740|ref|XP_002531672.1| protein with unknown function [Ricinus communis]
gi|223528703|gb|EEF30716.1| protein with unknown function [Ricinus communis]
Length = 225
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDS VGK+ ++ ++ N+FS KATIG +F T+ L + K V QIWDTAGQ
Sbjct: 17 VFKVVLIGDSAVGKSQILARFARNEFSLDSKATIGVEFQTRTLVIQHKSVKAQIWDTAGQ 76
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ ++TF+ + W EE AD + +L+GNK
Sbjct: 77 ERYRAVTSAYYRGAVGAILVYDITKRQTFDHIPRWLEELRSHAD----KNIVIILVGNKC 132
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D + S RVVP + A E+ G + + ETSA E N++ AFL V
Sbjct: 133 DLE--SQRVVPTEDAKEFAQKEG-LFFLETSALESTNVETAFLTV 174
>gi|403222703|dbj|BAM40834.1| Ras-related protein Rab-1 [Theileria orientalis strain Shintoku]
Length = 220
Score = 135 bits (341), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 74/174 (42%), Positives = 114/174 (65%), Gaps = 9/174 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K+IV+GDSG GK+SL+ ++ N +S+ Y +TIG DF K +++D+ + LQIWDTAGQ
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESL-QNWREEFLKQADPGEHEACPFVLLGNK 130
ERF+++ S +YRGA + VYDV + +F+ + Q W ++ K A C +L+GNK
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITQTWLQDIDKYATSN---VCK-LLIGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
ID +RVV ++A + A + N+ Y E SAK D N+++AF+ +A+ ALK+
Sbjct: 123 IDL--AENRVVSTEEA-KHVAEQNNMNYIEASAKTDSNVEKAFITIAK-ALKDR 172
>gi|440295276|gb|ELP88189.1| hypothetical protein EIN_224320 [Entamoeba invadens IP1]
Length = 193
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 66/175 (37%), Positives = 109/175 (62%), Gaps = 6/175 (3%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK++VLGDS VGKTSL+NQ+V K+S YK+T+G D T+++ ++DK+V L +WD +G E
Sbjct: 7 LKILVLGDSFVGKTSLINQFVNRKYSCDYKSTVGVDLSTRQISIEDKMVCLNVWDPSGTE 66
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+ + F+RG D C+LV + +++FE L +W++E +++ + PFV + NK D
Sbjct: 67 RFRCVSDNFFRGTDGCILVCSLTSKESFEDLASWKDEIVQRT----SSSIPFVAVANKSD 122
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
D ++ + WC N P+F SAK+ N++ AF+ +++ A+ D
Sbjct: 123 VDEMEWQLTTTRFE-SWCDL-NNFPHFLVSAKDATNVENAFVELSKTAMNATKID 175
>gi|401402024|ref|XP_003881151.1| unnamed protein product [Neospora caninum Liverpool]
gi|325115563|emb|CBZ51118.1| unnamed protein product [Neospora caninum Liverpool]
Length = 201
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 125/188 (66%), Gaps = 9/188 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWDTAG 70
L K++++GDSGVGK+++++++ ++F+ + K+TIG +F TK + +D+ K++ QIWDTAG
Sbjct: 11 LYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAG 70
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QER++++ SA+YRGA +LVYD+ +++FE+++ W +E ADP +L+GNK
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPN----IVILLVGNK 126
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKDIY 189
+D R V ++A ++ A R ++ + ETSA + N+++AF +AEI L + K I
Sbjct: 127 --SDLKHLRAVSVEEATKF-ANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE 183
Query: 190 YQPQGISE 197
PQ ++
Sbjct: 184 DNPQSTAQ 191
>gi|357454119|ref|XP_003597340.1| Ras-related protein ARA-3 [Medicago truncatula]
gi|124359616|gb|ABD32281.2| Ras GTPase; Sigma-54 factor, interaction region [Medicago
truncatula]
gi|355486388|gb|AES67591.1| Ras-related protein ARA-3 [Medicago truncatula]
Length = 213
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/168 (39%), Positives = 108/168 (64%), Gaps = 5/168 (2%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L+K++++GDSGVGK+SL+ ++ + F+ Y T+G D+ + +++D K + LQ+WDTAG
Sbjct: 14 HLIKLLLIGDSGVGKSSLLLRFSDSYFTTSYITTLGIDYKNRAIELDGKKIMLQVWDTAG 73
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYDV + +F ++ NW + + +L+GNK
Sbjct: 74 QERFRTITTAYYRGAMGILLVYDVTDESSFNNITNWIRSIEQHS---SDNIVNKILVGNK 130
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
+D D S R VP K + A + I +FETSAK + N+DEAF +A
Sbjct: 131 VDMD-ESKRAVPFSKG-QALANKYGIKFFETSAKTNLNVDEAFFSIAR 176
>gi|308322445|gb|ADO28360.1| ras-related protein rab-11b [Ictalurus furcatus]
Length = 218
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|355714977|gb|AES05183.1| RAB7, member RAS oncoprotein family-like 1 [Mustela putorius furo]
Length = 202
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 LSLSTQG 187
>gi|307171708|gb|EFN63443.1| Ras-related protein Rab-10 [Camponotus floridanus]
Length = 200
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 76/189 (40%), Positives = 114/189 (60%), Gaps = 10/189 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + FS + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ +KTFE++ W L+ D +E ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW----LRNIDEHANEDVEKMILGNKS 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV +K E A I + ETSAK + NID AF +AE L H +
Sbjct: 125 DME--EKRVVSTEKG-EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGK---E 178
Query: 192 PQGISETVS 200
PQ ++ V+
Sbjct: 179 PQDAADRVT 187
>gi|194387092|dbj|BAG59912.1| unnamed protein product [Homo sapiens]
Length = 179
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|255562484|ref|XP_002522248.1| protein with unknown function [Ricinus communis]
gi|223538501|gb|EEF40106.1| protein with unknown function [Ricinus communis]
Length = 218
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +D K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLIGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + K+ A R ++ + ETSA E N+D AF
Sbjct: 129 DLRHLVAVSTEDGKSF---AERESLYFMETSALEATNVDNAF 167
>gi|357134125|ref|XP_003568668.1| PREDICTED: ras-related protein RGP2-like isoform 1 [Brachypodium
distachyon]
gi|357134127|ref|XP_003568669.1| PREDICTED: ras-related protein RGP2-like isoform 2 [Brachypodium
distachyon]
Length = 217
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 70/169 (41%), Positives = 108/169 (63%), Gaps = 8/169 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+++++++ N FS K+TIG +F TK LQM+ K + QIWDTAGQ
Sbjct: 12 LFKMVLIGDSGVGKSNILSRFTRNHFSLDSKSTIGVEFATKSLQMEGKTIKAQIWDTAGQ 71
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +++FE++ W E AD + +++GNK
Sbjct: 72 ERYRAITSAYYRGAVGALLVYDITKRQSFENVNRWLRELRDHADS----SIVIMMVGNKS 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF-LCVAEI 179
D S Q KAL A + + + ETSA E N++EAF +AE+
Sbjct: 128 DLTHLRSVSEDQGKAL---AEKEGLFFLETSAMEAVNVEEAFQTIIAEV 173
>gi|348579296|ref|XP_003475416.1| PREDICTED: ras-related protein Rab-13-like [Cavia porcellus]
Length = 203
Score = 135 bits (341), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 69/168 (41%), Positives = 109/168 (64%), Gaps = 7/168 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++Q W + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQTWMKSIKENASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D + + R V +++A + G I +FETSAK N+DEAF +A
Sbjct: 123 CDME--AKRKVQKERADKLAREHG-IRFFETSAKSSTNVDEAFSSLAR 167
>gi|54695940|gb|AAV38342.1| RAB11B, member RAS oncogene family [Homo sapiens]
Length = 218
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSD----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|388504040|gb|AFK40086.1| unknown [Lotus japonicus]
Length = 199
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 107/171 (62%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+F+ KATIG +F TK L +D K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFSRNQFNVDSKATIGVEFQTKTLVIDSKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDLTKRQSFDHMAKWLEELRGHADTN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D + + VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 125 LIGNKCDL--ATLKAVPTEDAQEF-AQRENLFFMETSALESTNVETAFLTI 172
>gi|393219105|gb|EJD04593.1| ras-domain-containing protein [Fomitiporia mediterranea MF3/22]
Length = 479
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 65/125 (52%), Positives = 88/125 (70%), Gaps = 5/125 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQM---DDKLVTLQIWDTA 69
+K++++GDSGVGKTSL NQY+ +FS Y+ATIG DF+TK + ++ VTLQIWDTA
Sbjct: 4 IKLVIIGDSGVGKTSLRNQYIMGRFSTGYRATIGTDFITKTVPHYLNPEESVTLQIWDTA 63
Query: 70 GQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF--VLL 127
GQERF SL +AF+RGAD +L++DVN +T +L W + F A + EA F V++
Sbjct: 64 GQERFSSLSTAFFRGADAALLMFDVNRPETLSALTKWWDSFKAHAPVPDEEAEDFCCVVV 123
Query: 128 GNKID 132
GNKID
Sbjct: 124 GNKID 128
>gi|313221470|emb|CBY32219.1| unnamed protein product [Oikopleura dioica]
gi|313230502|emb|CBY18718.1| unnamed protein product [Oikopleura dioica]
Length = 204
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 69/166 (41%), Positives = 112/166 (67%), Gaps = 7/166 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +S+ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFSDDTYSESYISTIGVDFKIRTIELDGKTIKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA ++VYDV Q++F +++ W L++ D E+ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGIIVVYDVTDQESFNNVKQW----LQEIDRYASESVNKLLVGNKC 123
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + +VV A E+ A NIP+ ETSAK + N+++AFL +A
Sbjct: 124 DMT--TKKVVDYTTAKEY-ADSLNIPFLETSAKNNTNVEQAFLTMA 166
>gi|237838191|ref|XP_002368393.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|31745716|gb|AAP57202.1| Rab11 [Toxoplasma gondii]
gi|211966057|gb|EEB01253.1| Ras family domain-containing protein [Toxoplasma gondii ME49]
gi|221484334|gb|EEE22630.1| rab11, putative [Toxoplasma gondii GT1]
Length = 219
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 71/188 (37%), Positives = 125/188 (66%), Gaps = 9/188 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWDTAG 70
L K++++GDSGVGK+++++++ ++F+ + K+TIG +F TK + +D+ K++ QIWDTAG
Sbjct: 11 LYKIVLIGDSGVGKSNMLSRFTRDEFNLESKSTIGVEFATKSVYLDEGKVIKAQIWDTAG 70
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QER++++ SA+YRGA +LVYD+ +++FE+++ W +E ADP +L+GNK
Sbjct: 71 QERYRAITSAYYRGAVGALLVYDITKRQSFENVERWLKELRDHADPN----IVILLVGNK 126
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL-CVAEIALKNEHKDIY 189
+D R V ++A ++ A R ++ + ETSA + N+++AF +AEI L + K I
Sbjct: 127 --SDLKHLRAVSVEEATKF-ANREHLAFIETSALDATNVEQAFHQILAEIYLLRQKKQIE 183
Query: 190 YQPQGISE 197
PQ ++
Sbjct: 184 DNPQSTTQ 191
>gi|299473109|emb|CBN78685.1| Rab11A, RAB family GTPase [Ectocarpus siliculosus]
Length = 219
Score = 135 bits (341), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F TK +Q + K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATKSIQTEGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD++ TFE+++ W +E A+ +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDISKHVTFENVERWLKELRDHAEAN----IVVMLIGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R V ++A+E+ A + N+ + ETSA + +D AF
Sbjct: 126 -SDLRHLRTVTHEEAMEF-AKKHNLAFLETSALDASGVDSAF 165
>gi|307185019|gb|EFN71248.1| Ras-related protein Rab-11A [Camponotus floridanus]
Length = 215
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W E AD + +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD----QNIVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
+D R VP +A + A R + + ETSA + N++ AF + EI K I
Sbjct: 126 -SDLRHLRAVPTDEAKAF-AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRD 183
Query: 191 QPQGISETVSEVEQ 204
P+G + VEQ
Sbjct: 184 PPEGDTIRPHNVEQ 197
>gi|213514648|ref|NP_001133793.1| ras-related protein Rab-10 [Salmo salar]
gi|209150395|gb|ACI33022.1| Ras-related protein Rab-10 [Salmo salar]
gi|209155356|gb|ACI33910.1| Ras-related protein Rab-10 [Salmo salar]
Length = 201
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + +I++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANISIEKAFLTLAEDILR 172
>gi|1370190|emb|CAA98172.1| RAB8A [Lotus japonicus]
Length = 216
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 16 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 75
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 76 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIKNWIRNIEQHASDNVNK----ILVGNKA 131
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N++E F +A +I + D
Sbjct: 132 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIARDIKQRLADTDSRA 189
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I + GG A
Sbjct: 190 EPQTIQINQPDASASGGQAA 209
>gi|301774833|ref|XP_002922840.1| PREDICTED: ras-related protein Rab-32-like [Ailuropoda melanoleuca]
Length = 281
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D++ LV LQ+WD
Sbjct: 78 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDNRTLVRLQLWD 137
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +YR A +V+D++ TFE++ W+ + + P VLL
Sbjct: 138 IAGQERFGNMTRVYYREAVGAFIVFDISRGSTFEAVLKWKSDLDGKVRLANGSPIPAVLL 197
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D + PQ ++C G +FETSAK++ NIDEA + E L N
Sbjct: 198 ANKCDQKKDGGQNPPQMD--QFCKEHGFTGWFETSAKDNINIDEAARFLVENILANH 252
>gi|171689264|ref|XP_001909572.1| hypothetical protein [Podospora anserina S mat+]
gi|170944594|emb|CAP70705.1| unnamed protein product [Podospora anserina S mat+]
Length = 203
Score = 135 bits (340), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 78/207 (37%), Positives = 123/207 (59%), Gaps = 22/207 (10%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K V LQIWDTAGQ
Sbjct: 8 LFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S++YRGA +VYDV +F +++ W +E + A G ++ +L+GNK
Sbjct: 68 ERFRTITSSYYRGAHGICVVYDVTDMDSFNNVKQWLQEIDRYATEGVNK----LLVGNK- 122
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE---------IALK 182
+D +VV + A E+ G IP+ ETSAK N+++AFL +A IA
Sbjct: 123 -SDMADKKVVDYQVAKEFADSLG-IPFLETSAKNASNVEQAFLTMARQIKERMGSSIATN 180
Query: 183 NEHKDIYYQP-QGISETVSEVEQRGGC 208
N ++ P QG+S Q GGC
Sbjct: 181 NTKANVNVSPGQGVSN-----NQSGGC 202
>gi|763130|emb|CAA56176.1| YPT3 [Homo sapiens]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++ + SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRRITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|50308977|ref|XP_454494.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49643629|emb|CAG99581.1| KLLA0E12079p [Kluyveromyces lactis]
Length = 214
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/176 (40%), Positives = 111/176 (63%), Gaps = 8/176 (4%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S N +++K+++LGDSGVGK+ L+ ++V +KF+ + TIG DF K + ++ K V L
Sbjct: 12 STNKNYDSVMKILLLGDSGVGKSCLLVRFVEDKFTPTFITTIGIDFKIKTVDINGKRVKL 71
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
Q+WDTAGQERF+++ +A+YRGA VL+YDV ++TFE+++ W + A E
Sbjct: 72 QLWDTAGQERFRTITTAYYRGAMGIVLIYDVTDERTFENIRQWFSTVNQHA----SEDVV 127
Query: 124 FVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEI 179
+L+GNK D D +R V ++ E A IP+ E SAK+D N+ E F +A++
Sbjct: 128 MLLVGNKKDMD---TRTVSYEQG-EALAKELGIPFIEASAKDDTNVSEIFFTLAKL 179
>gi|18447915|dbj|BAB84323.1| ras-related protein RAB8-2 [Nicotiana tabacum]
gi|18447919|dbj|BAB84325.1| ras-related protein RAB8-4 [Nicotiana tabacum]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/196 (37%), Positives = 118/196 (60%), Gaps = 9/196 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLSESDSKT 188
Query: 191 QPQGISETVSEVEQRG 206
+PQ I +++ +Q G
Sbjct: 189 EPQAIR--INQSDQAG 202
>gi|395860030|ref|XP_003802320.1| PREDICTED: ras-related protein Rab-13 [Otolemur garnettii]
Length = 201
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/174 (41%), Positives = 112/174 (64%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVNIEGKKIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKEHASAGVER----LLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
D + RV QK+ + A I +FETSAK N+ EAF +A +I LK+
Sbjct: 123 CDME-AKRRV--QKEQADKLAQEHGIRFFETSAKSSVNVAEAFSSLARDILLKS 173
>gi|388508486|gb|AFK42309.1| unknown [Medicago truncatula]
Length = 217
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTKNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVVMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V + A + R N + ETSA E N++ AF
Sbjct: 129 DLR--HLRAVSTEDATSFSE-RENTYFMETSALESLNVESAF 167
>gi|149707806|ref|XP_001490786.1| PREDICTED: ras-related protein Rab-7L1-like isoform 1 [Equus
caballus]
Length = 203
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQRWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 VSSSTQG 187
>gi|40225607|gb|AAH09227.2| RAB13 protein, partial [Homo sapiens]
Length = 195
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/172 (42%), Positives = 112/172 (65%), Gaps = 8/172 (4%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAGQE
Sbjct: 1 FKLLLIGDSGVGKTCLIIRFAEDNFNNTYISTIGIDFKIRTVDIEGKKIKLQVWDTAGQE 60
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK D
Sbjct: 61 RFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAGVER----LLLGNKCD 116
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKN 183
+ + R V QK+ + A I +FETSAK N+DEAF +A +I LK+
Sbjct: 117 ME--AKRKV-QKEQADKLAREHGIRFFETSAKSSMNVDEAFSSLARDILLKS 165
>gi|12322015|gb|AAG51053.1|AC069473_15 ras-related GTP-binding protein, putative; 1694-2636 [Arabidopsis
thaliana]
Length = 220
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 107/171 (62%), Gaps = 9/171 (5%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER ++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQER--AVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN----IVIM 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 123 LIGNKCDL--GSLRAVPTEDAQEF-AQRENLFFMETSALEATNVETAFLTI 170
>gi|356568975|ref|XP_003552683.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 117/200 (58%), Gaps = 7/200 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K + A I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKG-QALADEYGIKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKA 188
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I + GG A
Sbjct: 189 EPQTIKINQPDQTATGGLAA 208
>gi|240254578|ref|NP_180943.4| RAB GTPaselike protein A1H [Arabidopsis thaliana]
gi|297826865|ref|XP_002881315.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|122244089|sp|Q1PEX3.1|RAA1H_ARATH RecName: Full=Ras-related protein RABA1h; Short=AtRABA1h
gi|91806311|gb|ABE65883.1| Ras-like GTP-binding protein [Arabidopsis thaliana]
gi|297327154|gb|EFH57574.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
gi|330253807|gb|AEC08901.1| RAB GTPaselike protein A1H [Arabidopsis thaliana]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/213 (37%), Positives = 121/213 (56%), Gaps = 21/213 (9%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV++ GDSGVGK++L++++ N FS ++TIG +F T+ +Q+DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLTGDSGVGKSNLLSRFTRNDFSHDSRSTIGVEFATRSIQVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----TVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFL--------CVAEIALKN 183
D + R + ++ ++ A R N + ETSA E N++ AF V++ AL
Sbjct: 129 DLN--HLRAISTEEVKDF-AERENTFFMETSALEAINVENAFTEVLTQIYRVVSKKALDA 185
Query: 184 EHKDIYYQPQ------GISETVSEVEQRGGCAC 210
P+ G + VS V++ G CA
Sbjct: 186 GDDPTTALPKGQMINVGSRDDVSAVKKSGCCAT 218
>gi|149944729|ref|NP_001092564.1| ras-related protein Rab-7L1 [Bos taurus]
gi|426239399|ref|XP_004013609.1| PREDICTED: ras-related protein Rab-7L1 isoform 1 [Ovis aries]
gi|148745251|gb|AAI42253.1| RAB7L1 protein [Bos taurus]
gi|296479392|tpg|DAA21507.1| TPA: RAB7, member RAS oncogene family-like 1 [Bos taurus]
Length = 203
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 4 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 64 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 124 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 180
Query: 188 IYYQPQG 194
+ QG
Sbjct: 181 MSLSTQG 187
>gi|440893578|gb|ELR46289.1| Ras-related protein Rab-7L1, partial [Bos grunniens mutus]
Length = 209
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/187 (39%), Positives = 107/187 (57%), Gaps = 4/187 (2%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDD-KLVTLQIWD 67
R +L KV+V+GD+ VGKTSL+ +Y + FS+ YK+T+G DF K LQ D ++V LQ+WD
Sbjct: 10 RDHLFKVLVVGDAAVGKTSLVQRYSQDSFSKHYKSTVGVDFALKVLQWSDSEMVRLQLWD 69
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF S+ +YR A CV+++DV TF + Q W+++ + E P +LL
Sbjct: 70 IAGQERFTSMTRLYYRDASACVIMFDVTNATTFSNSQKWKQDLDSKLTLPNGEPVPCLLL 129
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
NK D S V + + + G + ETS KE+ NI+EA + E + N +D
Sbjct: 130 ANKCDL---SPWAVSRDQVDRFSKENGFTGWTETSVKENKNINEAMRVLIEKMMSNSRED 186
Query: 188 IYYQPQG 194
+ QG
Sbjct: 187 MSLSTQG 193
>gi|307210968|gb|EFN87269.1| Ras-related protein Rab-11B [Harpegnathos saltator]
Length = 215
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/194 (38%), Positives = 118/194 (60%), Gaps = 8/194 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W E AD + +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLRELRDHAD----QNIVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV-AEIALKNEHKDIYY 190
+D R VP +A + A R + + ETSA + N++ AF + EI K I
Sbjct: 126 -SDLRHLRAVPTDEAKAF-AERNGLSFIETSALDSTNVETAFQNILTEIYRIVSQKQIRD 183
Query: 191 QPQGISETVSEVEQ 204
P+G + VEQ
Sbjct: 184 PPEGDTIRPQNVEQ 197
>gi|2808638|emb|CAA04701.1| small GTP-binding protein [Daucus carota]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 118/200 (59%), Gaps = 9/200 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + ++MD K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIEMDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FE SAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFEASAKTNMNVEEVFFSIAKDIKQRLAETDSKT 188
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I +++ EQ G +
Sbjct: 189 EPQTIK--INQQEQGAGTSA 206
>gi|308323189|gb|ADO28731.1| ras-related protein rab-11b [Ictalurus punctatus]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|71895051|ref|NP_001026268.1| ras-related protein Rab-10 [Gallus gallus]
gi|82233742|sp|Q5ZIT5.1|RAB10_CHICK RecName: Full=Ras-related protein Rab-10
gi|53134733|emb|CAG32358.1| hypothetical protein RCJMB04_23k10 [Gallus gallus]
Length = 200
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/171 (42%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG D K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDLKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNAKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D + RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DME--DKRVVPKAKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>gi|157117562|ref|XP_001658827.1| ras-related protein, putative [Aedes aegypti]
gi|108875998|gb|EAT40223.1| AAEL008029-PA [Aedes aegypti]
Length = 231
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/180 (39%), Positives = 114/180 (63%), Gaps = 6/180 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K N+ KV+++GDSGVGK+SL+ +Y NKF +++ TIG DF + ++++D+ + LQIWD
Sbjct: 27 KVHNMFKVLIIGDSGVGKSSLLLRYADNKFPLKHQITIGVDFKIRTIKINDEHIKLQIWD 86
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERF+ + +++YRGA +LVYDV K+F+ ++ W +E Q + E C L+
Sbjct: 87 TAGQERFRLITNSYYRGAHGVILVYDVTSMKSFQHVKRWLKEI--QVNCTTGEVCKL-LV 143
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D ++VP + A G + + E+SAKE N+++ F +A+ LK + K+
Sbjct: 144 GNK--NDNPQLKMVPPRDAKAVADMHG-MEFIESSAKECYNVEKVFTTIAKQILKQQLKE 200
>gi|66825345|ref|XP_646027.1| Rab GTPase [Dictyostelium discoideum AX4]
gi|74834150|sp|O76173.1|RAB1C_DICDI RecName: Full=Ras-related protein Rab-1C
gi|3273209|dbj|BAA31150.1| Rab1C [Dictyostelium discoideum]
gi|60474000|gb|EAL71937.1| Rab GTPase [Dictyostelium discoideum AX4]
Length = 201
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/166 (42%), Positives = 109/166 (65%), Gaps = 7/166 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLK++V+GDSGVGK+ ++ ++ N+F+ Y +TIG DF + +++D K + LQIWDTAGQ
Sbjct: 33 LLKILVIGDSGVGKSCMLLRFADNRFTDSYISTIGVDFCIRTIELDGKKIKLQIWDTAGQ 92
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +++YRGA ++VYD+ +F S++ W + + A P + +++GNK
Sbjct: 93 ERFKTITTSYYRGAHGLIIVYDITSMDSFNSIKRWLIDVDRFASPSVLK----LIVGNKC 148
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA 177
D + S R V K A ++ A NIP ETSAKE IDEAF+ +A
Sbjct: 149 DLN--SKRAVDFKIAKKF-ADELNIPIMETSAKESTAIDEAFIKLA 191
>gi|148701357|gb|EDL33304.1| mCG14915, isoform CRA_b [Mus musculus]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATHSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|157820973|ref|NP_001102372.1| ras-related protein Rab-32 [Rattus norvegicus]
gi|149039546|gb|EDL93708.1| similar to RAB32 (predicted), isoform CRA_a [Rattus norvegicus]
Length = 223
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 74/183 (40%), Positives = 108/183 (59%), Gaps = 3/183 (1%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVT 62
+V R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV
Sbjct: 15 AVPETREHLFKVLVIGELGVGKTSIIKRYVHQLFSQNYRATIGVDFALKVLNWDSRTLVR 74
Query: 63 LQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEAC 122
LQ+WD AGQERF ++ +Y+ A +V+D++ TF+++ W+ + +
Sbjct: 75 LQLWDIAGQERFGNMTRVYYKEALGAFVVFDISRSSTFDAVLKWKNDLDSKVHLPNGSPI 134
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
P VLL NK D SS+ Q ++C G I +FETSAK++ NIDEA + E L
Sbjct: 135 PAVLLANKCDQKKDSSQSPSQMN--QFCKDHGFIGWFETSAKDNINIDEATRFLVENMLA 192
Query: 183 NEH 185
N+
Sbjct: 193 NQQ 195
>gi|356499659|ref|XP_003518654.1| PREDICTED: ras-related protein RABE1c-like [Glycine max]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 75/200 (37%), Positives = 116/200 (58%), Gaps = 7/200 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDEASFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALKNEHKDIYY 190
D D S R VP K G I +FETSAK + N++E F +A +I + D
Sbjct: 131 DMD-ESKRAVPTSKGQALADEYG-IKFFETSAKTNMNVEEVFFSIARDIKQRLADTDSKA 188
Query: 191 QPQGISETVSEVEQRGGCAC 210
+PQ I + GG A
Sbjct: 189 EPQTIKINQPDQAATGGLAA 208
>gi|318065097|ref|NP_001187642.1| ras-related protein Rab-10 [Ictalurus punctatus]
gi|308323579|gb|ADO28925.1| ras-related protein rab-10 [Ictalurus punctatus]
Length = 200
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/198 (39%), Positives = 121/198 (61%), Gaps = 13/198 (6%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K ++++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELNGKRIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ + +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGILLVYDITNAKSFENISKW----LRNIEEHANEDVEKMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV + K E NI +FETSAK + NI++AFL +AE L HK +
Sbjct: 125 DME--DVRVVSKAKG-EQIVSEHNIRFFETSAKANINIEKAFLTLAEDVL---HKTPGKE 178
Query: 192 PQGISETVSEVEQRGGCA 209
P +E V +V R G +
Sbjct: 179 PT--NENV-DVNNRSGSS 193
>gi|52345666|ref|NP_001004880.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
gi|49671143|gb|AAH75268.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus (Silurana)
tropicalis]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++E+F
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEESF 165
>gi|384244926|gb|EIE18423.1| Rab8/RabE-family small GTPase [Coccomyxa subellipsoidea C-169]
Length = 210
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/206 (37%), Positives = 121/206 (58%), Gaps = 16/206 (7%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ + F+ + TIG DF K++ +D+K + LQIWDTAGQ
Sbjct: 11 LIKLLLIGDSGVGKSCLLLRFSEDSFTSSFITTIGIDFKIKKILIDNKWIKLQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ SA+YRGA +LVYDV + +F +++NW + A ++ VL+GNK
Sbjct: 71 ERFRTITSAYYRGAMGILLVYDVTDESSFNNIRNWMRNIEQHASDNVNK----VLVGNKC 126
Query: 132 DTDGGSSRV-VPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE---IALKNEHKD 187
D D RV Q +AL A I +FETSAK + +DE F +A+ + L++ D
Sbjct: 127 DMDESKRRVPYSQGQAL---ADEFGIQFFETSAKSNIKVDEVFQSIAKDVMLRLRDSQTD 183
Query: 188 IYYQPQG-----ISETVSEVEQRGGC 208
G +S T + +Q GC
Sbjct: 184 SPSAGSGSGNVHLSSTTASAKQSKGC 209
>gi|348522271|ref|XP_003448649.1| PREDICTED: ras-related protein Rab-35-like [Oreochromis niloticus]
Length = 201
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/171 (41%), Positives = 109/171 (63%), Gaps = 8/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAGQ
Sbjct: 8 LFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAGQ 67
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 68 ERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK- 121
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D +S+VV A ++ G I FETSAKE+ N++E F C+ E+ LK
Sbjct: 122 -NDDPNSKVVETTDAQKFAEQMG-ISLFETSAKENVNVEEMFNCITELVLK 170
>gi|225443742|ref|XP_002268815.1| PREDICTED: ras-related protein RABA1d [Vitis vinifera]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 102/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ L +D K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSLNVDGKVIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W E DP +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHSTFENVERWLRELRDHTDPN----IVVMLIGNKS 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + K+ A R ++ + ETSA E N+D AF
Sbjct: 129 DLRHLVAVSTEDGKSF---AERESLYFMETSALEATNVDNAF 167
>gi|148236881|ref|NP_001088852.1| RAB11B, member RAS oncogene family, gene 2 [Xenopus laevis]
gi|56540960|gb|AAH87498.1| LOC496163 protein [Xenopus laevis]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADNN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++E+F
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEESF 165
>gi|355703084|gb|EHH29575.1| GTP-binding protein YPT3 [Macaca mulatta]
Length = 218
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 66/162 (40%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 IFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
>gi|340504982|gb|EGR31367.1| hypothetical protein IMG5_111720 [Ichthyophthirius multifiliis]
Length = 175
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 107/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT++++++ ++FS + K TIG +F TK + D+KL+ QIWDTAGQ
Sbjct: 11 LFKIVIIGDSGVGKTNILSRFTKDEFSIESKPTIGVEFATKTVLNDNKLIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
E+++++ +A+YRGA + ++D+ Q TF++LQ W E + ADP +L+GNK
Sbjct: 71 EKYRAITNAYYRGAVGALTLFDITKQNTFDNLQKWLNELKENADPN----IVIMLVGNKC 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + +R V + A + A R + Y ETSA + N+DEAF
Sbjct: 127 DLN--ENRAVKTEDASAF-AERNQLAYIETSALDSTNVDEAF 165
>gi|290998764|ref|XP_002681950.1| rab family small GTPase [Naegleria gruberi]
gi|284095576|gb|EFC49206.1| rab family small GTPase [Naegleria gruberi]
Length = 215
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 77/217 (35%), Positives = 122/217 (56%), Gaps = 25/217 (11%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+V+GDSGVGK++L+ ++ NKF++ K TIG +F K ++ D + QIWDTAGQ
Sbjct: 6 LYKVVVIGDSGVGKSNLITRFTQNKFTKDTKPTIGVEFGAKSIEYDGVTIKGQIWDTAGQ 65
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA+ ++VYD+ Q++F++L+ W +E Q + G C +L+GNK
Sbjct: 66 ERFRAISAAYYRGANGALIVYDITNQESFDNLEKWFKEIENQGENG----CINILVGNKC 121
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK----- 186
D + +A A + N+ + ETSA + N+DEAF + + K + +
Sbjct: 122 DLNHLRQVETATGRAF---AEKHNVSFMETSALDSTNVDEAFTTLLKEIYKTQSRKSKKP 178
Query: 187 --DIYYQPQGISETV-----------SEVEQRGGCAC 210
D +P G S+ V + Q GGC C
Sbjct: 179 EEDRKDEPIGPSDKVIIDDGEGDKPKPKPAQGGGCGC 215
>gi|332031583|gb|EGI71055.1| Ras-related protein Rab-10 [Acromyrmex echinatior]
Length = 200
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + FS + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ +KTFE++ W L+ D +E ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW----LRNIDEHANEDVEKMILGNKS 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV +K E A I + ETSAK + NID AF +AE L H +
Sbjct: 125 DME--EKRVVSTEKG-EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHG---RE 178
Query: 192 PQGISETVSEVEQR 205
PQ + V+ V++R
Sbjct: 179 PQDAPDRVT-VDRR 191
>gi|195454241|ref|XP_002074152.1| GK12772 [Drosophila willistoni]
gi|194170237|gb|EDW85138.1| GK12772 [Drosophila willistoni]
Length = 205
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 76/203 (37%), Positives = 124/203 (61%), Gaps = 18/203 (8%)
Query: 4 SVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTL 63
S+N + L K++++GDSGVGK+ L+ ++ + +++ Y +TIG DF + +++D K + L
Sbjct: 3 SMNPEYDYLFKLLLIGDSGVGKSCLLLRFADDTYTESYISTIGVDFKIRTIELDGKTIKL 62
Query: 64 QIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACP 123
QIWDTAGQERF+++ S++YRGA ++VYD Q++F +++ W EE E AC
Sbjct: 63 QIWDTAGQERFRTITSSYYRGAHGIIVVYDCTDQESFNNVKQWLEEI-------ERYACE 115
Query: 124 FV---LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIA 180
V L+GNK +D + +VV A E+ A G IP+ ETSAK N+++AF+ +A
Sbjct: 116 NVNKLLVGNK--SDLTTKKVVDHTTAAEYAAQLG-IPFLETSAKSATNVEQAFMTMAA-- 170
Query: 181 LKNEHKDIYYQPQGISETVSEVE 203
E K+ P ++ S+V+
Sbjct: 171 ---EIKNRVGPPSSATDNASKVK 190
>gi|384490318|gb|EIE81540.1| small GTPase [Rhizopus delemar RA 99-880]
Length = 211
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 109/162 (67%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGKT+L++++ N+F+ + K+TIG +F T+ +Q+D+K V QIWDTAGQ
Sbjct: 10 LFKVVLIGDSGVGKTNLLSRFTRNEFNLESKSTIGVEFATRSVQVDNKTVKAQIWDTAGQ 69
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +T+E++ W +E AD +L+GNK
Sbjct: 70 ERYRAITSAYYRGAVGALLVYDIAKYQTYENVMRWLKELRDHADSN----IVVMLVGNK- 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP ++A ++ A G + + ETSA + N++ AF
Sbjct: 125 -SDLRHLRAVPTEEAKQFAADNG-LSFIETSALDSSNVELAF 164
>gi|291397122|ref|XP_002714910.1| PREDICTED: low-Mr GTP-binding protein Rab32-like [Oryctolagus
cuniculus]
Length = 230
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 73/177 (41%), Positives = 104/177 (58%), Gaps = 3/177 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDK-LVTLQIWD 67
R +L KV+V+G+ GVGKTS++ +YV+ FSQ Y+ATIG DF K L D + LV LQ+WD
Sbjct: 27 REHLFKVLVIGELGVGKTSIIKRYVHQLFSQHYRATIGVDFALKVLNWDSRTLVRLQLWD 86
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
AGQERF ++ +Y+ A +V+D++ TFE++ W+ + + A P VLL
Sbjct: 87 IAGQERFGNMTRVYYKEAVGAFVVFDISRSSTFEAVLKWKSDLDSKVHLPNGSAIPAVLL 146
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
NK D + PQ ++C G +FETSAK++ NIDEA + E L N
Sbjct: 147 ANKCDQKREGGQNPPQMD--QFCKEHGFTGWFETSAKDNINIDEAARFLVENILANH 201
>gi|223947393|gb|ACN27780.1| unknown [Zea mays]
Length = 216
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/176 (38%), Positives = 111/176 (63%), Gaps = 7/176 (3%)
Query: 1 MDISVNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKL 60
M VN + L K++++GDSGVGK+++++++ N+F + K+TIG +F T+ LQ+D K
Sbjct: 1 MAHRVNNEYDYLFKIVLIGDSGVGKSNILSRFTRNEFCLESKSTIGVEFATRNLQIDGKT 60
Query: 61 VTLQIWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHE 120
V QIWDTAGQER++++ SA+YRGA +LVYD+ +++F+S+Q W E AD
Sbjct: 61 VKAQIWDTAGQERYRAITSAYYRGAVGALLVYDITKKQSFDSVQRWLRELRGHADAN--- 117
Query: 121 ACPFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+++GNK D + R VP++ + G + + ETSA E N+++AF +
Sbjct: 118 -IVVMMVGNKSDLN--HLRSVPEEDGRAFSEKEG-LSFLETSALEAINVEKAFHTI 169
>gi|322802264|gb|EFZ22660.1| hypothetical protein SINV_03565 [Solenopsis invicta]
Length = 200
Score = 135 bits (340), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 78/194 (40%), Positives = 117/194 (60%), Gaps = 11/194 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + FS + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCILFRFSDDAFSTTFISTIGIDFKIKTVELRGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ +KTFE++ W L+ D +E ++LGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNEKTFENIVKW----LRNIDEHANEDVEKMILGNKS 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D + RVV +K E A I + ETSAK + NID AF +AE L H +
Sbjct: 125 DME--ERRVVSTEKG-EAIAREHGIRFMETSAKANINIDRAFSELAEAILDKTHGK---E 178
Query: 192 PQGISETVSEVEQR 205
PQ + V+ V++R
Sbjct: 179 PQDAPDRVT-VDRR 191
>gi|412989196|emb|CCO15787.1| predicted protein [Bathycoccus prasinos]
Length = 211
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/167 (41%), Positives = 108/167 (64%), Gaps = 6/167 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ +Y +KF+ + TIG DF K + +D K V +QIWDTAGQ
Sbjct: 14 LVKLLLIGDSGVGKSCLLLRYSDDKFTTSFITTIGIDFKIKTIDLDQKKVKMQIWDTAGQ 73
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +FE+++NW ++ + EA L+GNK
Sbjct: 74 ERFRTITAAYYRGAHGVLLVYDVTDETSFENVRNW----MRNIEAHASEAAKVCLIGNKC 129
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAE 178
D + S R V +++ + G +P+FETSAK ++EAF +A
Sbjct: 130 DCE-DSKRKVTKERGVALAKEFG-VPFFETSAKSGLRVEEAFSSMAR 174
>gi|297796937|ref|XP_002866353.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
gi|297312188|gb|EFH42612.1| hypothetical protein ARALYDRAFT_496120 [Arabidopsis lyrata subsp.
lyrata]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 118/198 (59%), Gaps = 7/198 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D S R VP+ K G I +FETSAK + N++E F +A+ +K D +
Sbjct: 131 DMD-ESKRAVPKSKGQALADEYG-IKFFETSAKTNLNVEEVFFSIAK-DIKQRLADTDSR 187
Query: 192 PQGISETVSEVEQRGGCA 209
+ + +S+ +Q G
Sbjct: 188 AEPATIKISQTDQAAGAG 205
>gi|224145285|ref|XP_002325590.1| predicted protein [Populus trichocarpa]
gi|222862465|gb|EEE99971.1| predicted protein [Populus trichocarpa]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 104/162 (64%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKLVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D R V + A + A R N + ETSA E N++ AF
Sbjct: 129 DLR--HLRAVTTEDATAF-AERENTFFMETSALESLNVENAF 167
>gi|357631591|gb|EHJ79060.1| putative ras-related protein Rab [Danaus plexippus]
Length = 201
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 71/174 (40%), Positives = 111/174 (63%), Gaps = 8/174 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+ L+ ++ N FS Y TIG DF + L+++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSCLLLRFADNTFSGSYITTIGVDFKIRTLEINGERVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D VL+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTNGESFANVKRWLHEIEQNCD-----VVNKVLVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
D S +VV + A + A + NIP FETSAKE+ N++E FL + ++ L+++
Sbjct: 122 --NDCPSRKVVVTEDAQRF-ANQMNIPLFETSAKENINVEEMFLTITKMVLRSK 172
>gi|15238542|ref|NP_200792.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
gi|9757904|dbj|BAB08351.1| Rab-type small GTP-binding protein-like [Arabidopsis thaliana]
gi|28393504|gb|AAO42173.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|28973447|gb|AAO64048.1| putative GTP-binding protein ara-3 [Arabidopsis thaliana]
gi|332009857|gb|AED97240.1| Ras-related protein Rab-8A [Arabidopsis thaliana]
Length = 216
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/198 (36%), Positives = 119/198 (60%), Gaps = 7/198 (3%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L+K++++GDSGVGK+ L+ ++ F+ + TIG DF + +++D K + LQIWDTAGQ
Sbjct: 15 LIKLLLIGDSGVGKSCLLLRFSDGSFTTSFITTIGIDFKIRTIELDGKRIKLQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+++ +A+YRGA +LVYDV + +F +++NW + A ++ +L+GNK
Sbjct: 75 ERFRTITTAYYRGAMGILLVYDVTDESSFNNIRNWIRNIEQHASDNVNK----ILVGNKA 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYYQ 191
D D S R VP+ K + A I +FETSAK + N++E F +A+ +K D +
Sbjct: 131 DMD-ESKRAVPKSKG-QALADEYGIKFFETSAKTNLNVEEVFFSIAK-DIKQRLADTDSR 187
Query: 192 PQGISETVSEVEQRGGCA 209
+ + +S+ +Q G
Sbjct: 188 AEPATIKISQTDQAAGAG 205
>gi|297693159|ref|XP_002823893.1| PREDICTED: ras-related protein Rab-35 [Pongo abelii]
Length = 201
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/172 (40%), Positives = 110/172 (63%), Gaps = 8/172 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGK+SL+ ++ N FS Y TIG DF + ++++ + V LQIWDTAG
Sbjct: 7 HLFKLLIIGDSGVGKSSLLLRFADNTFSGSYITTIGVDFKIRTVEINGEKVKLQIWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ S +YRG ++VYDV ++F +++ W E + D + C +L+GNK
Sbjct: 67 QERFRTITSTYYRGTHGVIVVYDVTSAESFVNVKRWLHEINQNCD----DVCR-ILVGNK 121
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D +VV + A ++ A G I FETSAKE+ N++E F C+ E+ L+
Sbjct: 122 --NDDPERKVVETEDAYKFAAQMG-IQLFETSAKENVNVEEMFNCITELVLR 170
>gi|226529503|ref|NP_001151078.1| ras-related protein Rab11C [Zea mays]
gi|226958337|ref|NP_001152941.1| ras-related protein Rab11C [Zea mays]
gi|195629564|gb|ACG36423.1| ras-related protein Rab11C [Zea mays]
gi|195644124|gb|ACG41530.1| ras-related protein Rab11C [Zea mays]
gi|223973589|gb|ACN30982.1| unknown [Zea mays]
Length = 219
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 70/165 (42%), Positives = 104/165 (63%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F + K+TIG +F T+ L ++ K++ QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFCLESKSTIGVEFATRTLHVEGKIIKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA VLVYDV+ TFE++ W +E AD +L+GNK
Sbjct: 73 ERYRAITSAYYRGALGAVLVYDVSKPTTFENISRWLKELRDHADSN----TRIMLVGNK- 127
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
TD R V A + G + Y ETSA E N++EAF +
Sbjct: 128 -TDLRHLRAVATDDARSFAEAEG-LSYIETSALEATNVEEAFQLI 170
>gi|15239462|ref|NP_200894.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
gi|75171043|sp|Q9FJH0.1|RAA1F_ARATH RecName: Full=Ras-related protein RABA1f; Short=AtRABA1f
gi|10176913|dbj|BAB10106.1| GTP-binding protein, ras-like [Arabidopsis thaliana]
gi|26452359|dbj|BAC43265.1| putative GTP-binding protein [Arabidopsis thaliana]
gi|28950757|gb|AAO63302.1| At5g60860 [Arabidopsis thaliana]
gi|332010004|gb|AED97387.1| RAB GTPase homolog A1F [Arabidopsis thaliana]
Length = 217
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 68/162 (41%), Positives = 101/162 (62%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ + +DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIHVDDKIVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D + +GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDAN----IVIMFVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N++ AF
Sbjct: 129 DLRHLRAVSTEDAKAF---AERENTFFMETSALESMNVENAF 167
>gi|225443554|ref|XP_002277579.1| PREDICTED: ras-related protein RABA1f [Vitis vinifera]
Length = 217
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 69/162 (42%), Positives = 103/162 (63%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+FS + K+TIG +F T+ +++DDK+V QIWDTAGQ
Sbjct: 13 LFKVVLIGDSGVGKSNLLSRFTRNEFSLESKSTIGVEFATRSIRVDDKVVKAQIWDTAGQ 72
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYDV TFE+++ W +E D +L+GNK
Sbjct: 73 ERYRAITSAYYRGAVGALLVYDVTRHVTFENVERWLKELRDHTDSN----IVIMLVGNKA 128
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + KA A R N + ETSA E N++ AF
Sbjct: 129 DLRHLRAVSTEDAKAF---AERENNFFMETSALESMNVENAF 167
>gi|116789126|gb|ABK25126.1| unknown [Picea sitchensis]
Length = 224
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 72/165 (43%), Positives = 105/165 (63%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ K++++GDS VGK+ L+ ++ N+FS KATIG +F T+ L +D K V QIWDTAGQ
Sbjct: 15 VFKIVLIGDSAVGKSQLLARFARNEFSLDSKATIGVEFQTRTLVIDHKTVKAQIWDTAGQ 74
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ ++TF+ + W EE AD +L+GNK
Sbjct: 75 ERYRAVTSAYYRGAVGAMLVYDITKRQTFDHVARWLEELRGHADNN----IVIMLIGNKC 130
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
D G+ R VP + A E+ A R + + ETSA E N++ AFL V
Sbjct: 131 DL--GNLRAVPIEDAREF-AQREGLFFLETSALEAINVESAFLTV 172
>gi|74826761|sp|Q9TVU5.1|RAB1_THEPA RecName: Full=Ras-related protein Rab-1; AltName: Full=Small
GTP-binding protein rab1; Short=TpRab1
gi|5764095|gb|AAD51132.1|AF107762_1 small GTP-binding protein rab1 [Theileria parva]
gi|5764097|gb|AAD51133.1|AF107763_1 small GTP-binding protein rab1 [Theileria parva]
Length = 220
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 79/190 (41%), Positives = 118/190 (62%), Gaps = 11/190 (5%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K+IV+GDSG GK+SL+ ++ N +S+ Y +TIG DF K +++D+ + LQIWDTAGQ
Sbjct: 7 LFKIIVIGDSGTGKSSLLLRFADNTYSESYMSTIGVDFKIKTVKIDNTTIKLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESL-QNWREEFLKQADPGEHEACPFVLLGNK 130
ERF+++ S +YRGA + VYDV + +F+ + + W ++ K A C +L+GNK
Sbjct: 67 ERFRTITSTYYRGAHGIICVYDVTNKLSFDHITETWLQDIDKYATSN---VCK-LLIGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKDIYY 190
ID SRVV +A + A + N+ Y E SAK D N+++AF +A+ ALK+ K Y
Sbjct: 123 IDL--AESRVVSADEA-KHVAEQNNMNYIEASAKTDSNVEKAFTTIAK-ALKD--KVTQY 176
Query: 191 QPQGISETVS 200
+ TVS
Sbjct: 177 PSNAPASTVS 186
>gi|301785982|ref|XP_002928408.1| PREDICTED: ras-related protein Rab-11B-like [Ailuropoda
melanoleuca]
Length = 274
Score = 135 bits (339), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 67/162 (41%), Positives = 108/162 (66%), Gaps = 7/162 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L KV+++GDSGVGK++L++++ N+F+ + K+TIG +F T+ +Q+D K + QIWDTAGQ
Sbjct: 11 LFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQVDGKTIKAQIWDTAGQ 70
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ T+E+++ W +E AD +L+GNK
Sbjct: 71 ERYRAITSAYYRGAVGALLVYDIAKHLTYENVERWLKELRDHADSN----IVIMLVGNK- 125
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
+D R VP +A + A + N+ + ETSA + N++EAF
Sbjct: 126 -SDLRHLRAVPTDEARAF-AEKNNLSFIETSALDSTNVEEAF 165
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,195,133,255
Number of Sequences: 23463169
Number of extensions: 126799996
Number of successful extensions: 540211
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 16254
Number of HSP's successfully gapped in prelim test: 8262
Number of HSP's that attempted gapping in prelim test: 499249
Number of HSP's gapped (non-prelim): 25672
length of query: 210
length of database: 8,064,228,071
effective HSP length: 136
effective length of query: 74
effective length of database: 9,168,204,383
effective search space: 678447124342
effective search space used: 678447124342
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 73 (32.7 bits)