BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= 028305
(210 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q43463|RAB7_SOYBN Ras-related protein Rab7 OS=Glycine max PE=2 SV=1
Length = 206
Score = 327 bits (839), Expect = 3e-89, Method: Compositional matrix adjust.
Identities = 159/208 (76%), Positives = 182/208 (87%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGDSGVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L+NW EEFLKQA+P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDTLENWHEEFLKQANPPDPRAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCAAKGNIPYFETSAKEDYNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>sp|Q41640|RAB7_VIGAC Ras-related protein Rab7 OS=Vigna aconitifolia PE=2 SV=1
Length = 206
Score = 323 bits (829), Expect = 4e-88, Method: Compositional matrix adjust.
Identities = 156/208 (75%), Positives = 180/208 (86%), Gaps = 4/208 (1%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++++RR LLKVIVLGD+GVGKTSLMNQYV+ KFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSLRRRTLLKVIVLGDTGVGKTSLMNQYVHKKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVL YDVNV K+F++L NW EEFLKQA+P + + PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLAYDVNVMKSFDTLDNWHEEFLKQANPPDPRSFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNKID DGG+SRVV +KKA +WCA +GNIPYFETSAKED N+D AFLC+A+ AL NE
Sbjct: 121 ILLGNKIDIDGGNSRVVSEKKAKDWCASKGNIPYFETSAKEDFNVDAAFLCIAKAALANE 180
Query: 185 H-KDIYYQPQGISE-TVSEVEQRGGCAC 210
H +DIY+ QGI E V E EQR GCAC
Sbjct: 181 HEQDIYF--QGIPEAAVPENEQRSGCAC 206
>sp|O04157|RAG3B_ARATH Ras-related protein RABG3b OS=Arabidopsis thaliana GN=RABG3B PE=1
SV=1
Length = 203
Score = 313 bits (802), Expect = 5e-85, Method: Compositional matrix adjust.
Identities = 152/207 (73%), Positives = 175/207 (84%), Gaps = 5/207 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQYV NKFSQQYKATIGADFVTKELQ+DD+LVTLQ
Sbjct: 1 MSTRRRTLLKVIILGDSGVGKTSLMNQYVNNKFSQQYKATIGADFVTKELQIDDRLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVN K+FESL NW EFL +A P + A PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNHLKSFESLDNWHNEFLTRASPRDPMAFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
+LLGNK+D DGG+SRVV +KKA EWCA +GNI YFETSAKED N+D++FLC+ ++AL NE
Sbjct: 121 ILLGNKVDIDGGNSRVVSEKKAREWCAEKGNIVYFETSAKEDYNVDDSFLCITKLALANE 180
Query: 185 H-KDIYYQPQGISETVSEVEQRGGCAC 210
+DIY+QP +T S EQRGGCAC
Sbjct: 181 RDQDIYFQP----DTGSVPEQRGGCAC 203
>sp|Q948K8|RAG3A_ARATH Ras-related protein RABG3a OS=Arabidopsis thaliana GN=RABG3A PE=2
SV=1
Length = 206
Score = 310 bits (795), Expect = 4e-84, Method: Compositional matrix adjust.
Identities = 150/205 (73%), Positives = 174/205 (84%), Gaps = 4/205 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVIVLGDSGVGKTSLMNQYV+ KFS QYKATIGADFVTKELQ+ +KLVTLQIWD
Sbjct: 4 RRRTLLKVIVLGDSGVGKTSLMNQYVHKKFSMQYKATIGADFVTKELQIGEKLVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG+AFYRGADCC LVYDVNV ++F++L+ W EEFLKQA P + + PF++L
Sbjct: 64 TAGQERFQSLGAAFYRGADCCALVYDVNVLRSFDNLETWHEEFLKQASPSDPKTFPFIVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH-K 186
GNKID DGGSSRVV KKA +WCA GNIPYFETSAK+D N+DEAFL +A+ AL NEH +
Sbjct: 124 GNKIDVDGGSSRVVSDKKAADWCASNGNIPYFETSAKDDFNVDEAFLTIAKTALANEHEQ 183
Query: 187 DIYYQPQGISETVSEVEQR-GGCAC 210
DIY+ QGI + V+E E + GGCAC
Sbjct: 184 DIYF--QGIPDAVTENEPKGGGCAC 206
>sp|Q9SJ11|RABG2_ARATH Ras-related protein RABG2 OS=Arabidopsis thaliana GN=RABG2 PE=1
SV=2
Length = 212
Score = 303 bits (776), Expect = 6e-82, Method: Compositional matrix adjust.
Identities = 151/212 (71%), Positives = 173/212 (81%), Gaps = 9/212 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
++K R LLKVIVLGDSGVGKTSLMNQYVY KF++QYKATIGADFVTKEL +D+K VTLQI
Sbjct: 3 SLKNRTLLKVIVLGDSGVGKTSLMNQYVYKKFNKQYKATIGADFVTKELHIDEKSVTLQI 62
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQERFQSLG+AFYRGADCCVLVYDVN K+FE+L NW EFLKQA+P E E PFV
Sbjct: 63 WDTAGQERFQSLGAAFYRGADCCVLVYDVNNLKSFETLNNWHTEFLKQANPMEPETFPFV 122
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEH 185
L+GNK D DGG+SRVV K+A+EWC +GNIPY ETSAKED NIDEAFL VA IAL NE
Sbjct: 123 LIGNKTDVDGGNSRVVSNKRAIEWCGSKGNIPYHETSAKEDTNIDEAFLSVAHIALSNER 182
Query: 186 K---DIYYQPQG-ISETVSEV---EQRGGCAC 210
K DIY P+G ++V+++ +Q GCAC
Sbjct: 183 KQSNDIY--PRGQYHDSVTDIIDPDQSRGCAC 212
>sp|O24461|RAB7_PRUAR Ras-related protein Rab7 OS=Prunus armeniaca PE=2 SV=1
Length = 207
Score = 292 bits (748), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 143/204 (70%), Positives = 163/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFENLNNWREEFLIQATPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D+AF C+A+ AL NE ++
Sbjct: 124 GNKIDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDDAFQCIAKNALNNEPEE 183
Query: 188 IYYQPQGISETVSEVEQR-GGCAC 210
Y P I +QR GC C
Sbjct: 184 EIYLPDTIDVAGGGRQQRSSGCEC 207
>sp|Q9XER8|RAB7_GOSHI Ras-related protein Rab7 OS=Gossypium hirsutum GN=RAB7 PE=2 SV=1
Length = 207
Score = 292 bits (747), Expect = 1e-78, Method: Compositional matrix adjust.
Identities = 142/204 (69%), Positives = 162/204 (79%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q DD+L TLQIWD
Sbjct: 4 RRRMLLKVIILGDSGVGKTSLMNQYVNRKFSNQYKATIGADFLTKEVQFDDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DVNV K+F++L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVHDVNVMKSFDNLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+A ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECIARNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRG-GCAC 210
Y P+ I QR GC C
Sbjct: 184 EIYLPETIDVASGGRPQRSTGCEC 207
>sp|Q9LW76|RAG3C_ARATH Ras-related protein RABG3c OS=Arabidopsis thaliana GN=RABG3C PE=2
SV=1
Length = 206
Score = 289 bits (739), Expect = 1e-77, Method: Compositional matrix adjust.
Identities = 138/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQIWD
Sbjct: 4 RRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV DVNV K+FE+L NWREEFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVNDVNVMKSFENLNNWREEFLIQASPSDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK D DGG SRVV +KKA WCA +GNIPYFETSAK+ N+D AF C+A+ ALKNE ++
Sbjct: 124 GNKTDVDGGKSRVVTEKKAKSWCASKGNIPYFETSAKDGVNVDAAFECIAKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I + ++ GC C
Sbjct: 184 EVYLPDTIDVAGARQQRSTGCEC 206
>sp|Q9XI98|RAG3E_ARATH Ras-related protein RABG3e OS=Arabidopsis thaliana GN=RABG3E PE=2
SV=1
Length = 206
Score = 287 bits (735), Expect = 3e-77, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE L NWREEFL QA P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSAKSFEDLNNWREEFLIQASPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGGSSRVV +KKA WCA +GNIPY+ETSAK N+++AFLC+ A+K+ ++
Sbjct: 124 GNKIDVDGGSSRVVSEKKARAWCASKGNIPYYETSAKVGTNVEDAFLCITTNAMKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 EMYLPDTIDVGTSNPQRSTGCEC 206
>sp|Q9C820|RAG3D_ARATH Ras-related protein RABG3d OS=Arabidopsis thaliana GN=RABG3D PE=2
SV=1
Length = 206
Score = 287 bits (734), Expect = 4e-77, Method: Compositional matrix adjust.
Identities = 137/206 (66%), Positives = 162/206 (78%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ +RR LLKVI+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKE+Q+DD++ TLQ
Sbjct: 1 MSSRRRVLLKVIILGDSGVGKTSLMNQFVNRKFSNQYKATIGADFLTKEVQIDDRIFTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLG AFYRGADCCVLVYDVNV K+F++L NWREEFL QA P + E PF
Sbjct: 61 IWDTAGQERFQSLGVAFYRGADCCVLVYDVNVMKSFDNLNNWREEFLIQASPSDPENFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNK D DGG SRVV +KKA WCA +GNIPYFETSAKE N+D AF C+ + A KNE
Sbjct: 121 VVLGNKTDVDGGKSRVVSEKKAKAWCASKGNIPYFETSAKEGFNVDAAFECITKNAFKNE 180
Query: 185 HKDIYYQPQGISETVSEVEQRGGCAC 210
++ Y P I + ++ GC C
Sbjct: 181 PEEEPYLPDTIDVAGGQQQRSTGCEC 206
>sp|Q9LS94|RAG3F_ARATH Ras-related protein RABG3f OS=Arabidopsis thaliana GN=RABG3F PE=2
SV=1
Length = 206
Score = 286 bits (733), Expect = 6e-77, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 160/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L NWREEFL QA P + E PFVL+
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFENLNNWREEFLIQASPSDPENFPFVLI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D D G+SRVV +KKA WCA +GNIPYFETSAK N++EAF C+A+ ALK+ ++
Sbjct: 124 GNKVDVDDGNSRVVSEKKAKAWCASKGNIPYFETSAKVGTNVEEAFQCIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S ++ GC C
Sbjct: 184 ELYLPDTIDVGTSNQQRSTGCEC 206
>sp|Q40787|RAB7_CENCI Ras-related protein Rab7 OS=Cenchrus ciliaris PE=2 SV=1
Length = 206
Score = 286 bits (731), Expect = 9e-77, Method: Compositional matrix adjust.
Identities = 136/203 (66%), Positives = 159/203 (78%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSMKSFDNLNNWREEFLIQASPSDPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D DGG+SRVV +KKA WCA +GNIPYFETSAKE N+++AF C+ + ALKNE ++
Sbjct: 124 GNKVDVDGGNSRVVSEKKAKAWCASKGNIPYFETSAKEGTNVEDAFQCIVKNALKNEPEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P + QR C
Sbjct: 184 ELYVPDTVDVVGGNRAQRSSGCC 206
>sp|P31022|RAB7_PEA Ras-related protein Rab7 OS=Pisum sativum PE=2 SV=1
Length = 206
Score = 285 bits (728), Expect = 2e-76, Method: Compositional matrix adjust.
Identities = 137/203 (67%), Positives = 161/203 (79%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+Q +D+L TLQIWD
Sbjct: 4 RRRTLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L NWREEFL QA+P + E PFV++
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNSVKSFDNLNNWREEFLIQANPSDPENFPFVVI 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGG+SRVV +KKA WCA +GNIPYFETSAKE N++EAF +A+ ALK+ ++
Sbjct: 124 GNKIDIDGGNSRVVSEKKARAWCAAKGNIPYFETSAKEGINVEEAFQTIAKDALKSGEEE 183
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
Y P I S + GC C
Sbjct: 184 ELYLPDTIDVGNSSQPRSTGCEC 206
>sp|P93267|RAB7_MESCR Ras-related protein Rab7A OS=Mesembryanthemum crystallinum PE=2
SV=1
Length = 207
Score = 284 bits (726), Expect = 4e-76, Method: Compositional matrix adjust.
Identities = 137/204 (67%), Positives = 158/204 (77%), Gaps = 1/204 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+RR LLK+I+LGDSGVGKTSLMNQ+V KFS QYKATIGADF+TKELQ +D+L TLQIWD
Sbjct: 4 RRRKLLKIIILGDSGVGKTSLMNQFVNKKFSNQYKATIGADFLTKELQFEDRLFTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV K+FESL WREEFL QA P + + PFVLL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLTYDVNVMKSFESLNRWREEFLIQASPADPDNFPFVLL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID DGGS RVV +KKA WC +GNIPYFETSAK+ N++EAF C+A+ A++NE ++
Sbjct: 124 GNKIDVDGGSGRVVSEKKAKAWCMSKGNIPYFETSAKDGTNVEEAFQCIAKNAIQNEPEE 183
Query: 188 IYYQPQGISETVSEVEQ-RGGCAC 210
Y P I S Q C C
Sbjct: 184 ETYLPDTIDMAGSTRPQSSSACEC 207
>sp|Q39573|YPTC5_CHLRE GTP-binding protein YPTC5 OS=Chlamydomonas reinhardtii GN=YPTC5
PE=3 SV=1
Length = 206
Score = 279 bits (713), Expect = 1e-74, Method: Compositional matrix adjust.
Identities = 129/205 (62%), Positives = 164/205 (80%), Gaps = 1/205 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ K+R LLKVI+LGDSGVGKTSLMNQYV KF+++YKATIGADF+TKE+++DDK VT+Q
Sbjct: 1 MSTKKRRLLKVIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLGSAFYRGADCCVLV+DVN K+F+ L NWR+EF+ QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCVLVFDVNNAKSFDDLDNWRDEFIIQAGPPDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
++LGNKID +GGSSR V +KKA WCA +G+IPYFETSAKED N++ AF C+ AL+NE
Sbjct: 121 MVLGNKIDENGGSSRQVSEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 180
Query: 185 HKDIYYQPQGIS-ETVSEVEQRGGC 208
++ + P + T + +R GC
Sbjct: 181 KEEELFMPDAVDMNTTATQRKRAGC 205
>sp|P36864|YPTV5_VOLCA GTP-binding protein yptV5 OS=Volvox carteri GN=YPTV5 PE=3 SV=1
Length = 205
Score = 268 bits (684), Expect = 3e-71, Method: Compositional matrix adjust.
Identities = 125/205 (60%), Positives = 163/205 (79%), Gaps = 2/205 (0%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ K+R +LK+I+LGDSGVGKTSLMNQYV KF+++YKATIGADF+TKE+++DDK VT+Q
Sbjct: 1 MSTKKRRVLKIIILGDSGVGKTSLMNQYVQKKFTKEYKATIGADFLTKEIEVDDKKVTMQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDTAGQERFQSLGSAFYRGADCC+LV+DVN K+F+ L NWR+EF+ QA P + + PF
Sbjct: 61 IWDTAGQERFQSLGSAFYRGADCCMLVFDVNNAKSFDDLDNWRDEFIIQAGPSDPDNFPF 120
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
V+LGNKID + G +R V +KKA WCA +G+IPYFETSAKED N++ AF C+ AL+NE
Sbjct: 121 VVLGNKID-EVGVNRQVTEKKAKAWCASKGSIPYFETSAKEDINVEAAFTCITRNALRNE 179
Query: 185 HKDIYYQPQGISETVSEVE-QRGGC 208
++ + P + S + +RGGC
Sbjct: 180 KEEELFVPDAVDMNTSATQRKRGGC 204
>sp|P36411|RAB7A_DICDI Ras-related protein Rab-7A OS=Dictyostelium discoideum GN=rab7A
PE=1 SV=1
Length = 203
Score = 259 bits (661), Expect = 1e-68, Method: Compositional matrix adjust.
Identities = 127/201 (63%), Positives = 153/201 (76%), Gaps = 2/201 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKEL +DD++VT+QIWD
Sbjct: 4 KKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKELMVDDRVVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVL YDVNV KTFE+L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLCYDVNVAKTFENLDSWRDEFLIQAGPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + + RVV QK+A WC +GNIPYFETSAKE N+++AF +A A+K E
Sbjct: 124 GNKIDLE--NQRVVSQKRAASWCQSKGNIPYFETSAKEAINVEQAFQTIARNAIKLEDGL 181
Query: 188 IYYQPQGISETVSEVEQRGGC 208
++ P I + GC
Sbjct: 182 VFPIPTNIQVIPEPQPAKSGC 202
>sp|O94655|YPT7_SCHPO GTP-binding protein ypt7 OS=Schizosaccharomyces pombe (strain 972 /
ATCC 24843) GN=ypt7 PE=3 SV=1
Length = 205
Score = 251 bits (641), Expect = 3e-66, Method: Compositional matrix adjust.
Identities = 120/180 (66%), Positives = 146/180 (81%), Gaps = 1/180 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K+++LLKVI+LG+SGVGKTS+MNQYV KFS+ YKATIGADF+TKE+ +DDK+VTLQ+WD
Sbjct: 4 KKKHLLKVIILGESGVGKTSIMNQYVNRKFSKDYKATIGADFLTKEVLVDDKVVTLQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+FE+L +WR+EFL QA P E PF+LL
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFETLDSWRDEFLIQASPSNPETFPFILL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R+V + KAL +C RG IPYFETSAKE N+ EAF VA++AL+N D
Sbjct: 124 GNKVDVE-EQKRMVSKSKALAFCQARGEIPYFETSAKEAINVQEAFETVAKLALENMDSD 182
>sp|Q9C2L8|RAB7_NEUCR Probable Ras-related protein Rab7 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=17E5.300 PE=3 SV=1
Length = 205
Score = 244 bits (622), Expect = 4e-64, Method: Compositional matrix adjust.
Identities = 119/203 (58%), Positives = 151/203 (74%), Gaps = 1/203 (0%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS YKATIGADF+T+E+ +DD+ VT+Q+WD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSASYKATIGADFLTREVLVDDRQVTMQLWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYDVN K+F++L +WR+EFL QA P + + PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVYDVNNSKSFDALDSWRDEFLIQASPRDPDNFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + S RV+ K+A+ +C +GNIPYFETSAKE N+++AF +A AL E +
Sbjct: 124 GNKIDME-ESKRVISTKRAMTFCQSKGNIPYFETSAKEAINVEQAFEVIARNALMQEESE 182
Query: 188 IYYQPQGISETVSEVEQRGGCAC 210
+ + R GCAC
Sbjct: 183 EFSGDFQDPINIHIENDRDGCAC 205
>sp|P09527|RAB7A_RAT Ras-related protein Rab-7a OS=Rattus norvegicus GN=Rab7a PE=1 SV=2
Length = 207
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 122/205 (59%), Positives = 151/205 (73%), Gaps = 5/205 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYYQ--PQGISETVSEVEQRGGCAC 210
Y P+ I +E + +C
Sbjct: 181 ELYNEFPEPIKLDKNERAKASAESC 205
>sp|Q5R9Y4|RAB7A_PONAB Ras-related protein Rab-7a OS=Pongo abelii GN=RAB7A PE=2 SV=1
Length = 207
Score = 243 bits (621), Expect = 5e-64, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>sp|P18067|RAB7A_CANFA Ras-related protein Rab-7a OS=Canis familiaris GN=RAB7A PE=2 SV=1
Length = 207
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>sp|P51150|RAB7A_MOUSE Ras-related protein Rab-7a OS=Mus musculus GN=Rab7a PE=1 SV=2
Length = 207
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>sp|P51149|RAB7A_HUMAN Ras-related protein Rab-7a OS=Homo sapiens GN=RAB7A PE=1 SV=1
Length = 207
Score = 243 bits (621), Expect = 6e-64, Method: Compositional matrix adjust.
Identities = 117/177 (66%), Positives = 141/177 (79%), Gaps = 3/177 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNE 184
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF +A ALK E
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIARNALKQE 177
>sp|Q3T0F5|RAB7A_BOVIN Ras-related protein Rab-7a OS=Bos taurus GN=RAB7A PE=2 SV=1
Length = 207
Score = 243 bits (619), Expect = 9e-64, Method: Compositional matrix adjust.
Identities = 121/207 (58%), Positives = 150/207 (72%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLV+DV TF++L +WR+EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLGVAFYRGADCCVLVFDVTAPNTFKTLDSWRDEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A WC + NIPYFETSAKE N+++AF + ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWCYSKNNIPYFETSAKEAINVEQAFQTIVRNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + GC+C
Sbjct: 181 ELYNEFPEPIKLDKNDRTKPSAEGCSC 207
>sp|O97572|RAB7A_RABIT Ras-related protein Rab-7a OS=Oryctolagus cuniculus GN=RAB7A PE=2
SV=1
Length = 207
Score = 238 bits (606), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 119/207 (57%), Positives = 147/207 (71%), Gaps = 7/207 (3%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ LLKVI+LGDSGVGKTSLMNQYV KFS QYKATIGADF+TKE+ +DD+LVT+QIWD
Sbjct: 4 RKKVLLKVIILGDSGVGKTSLMNQYVNKKFSNQYKATIGADFLTKEVMVDDRLVTMQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSL AFYRGADCCVLV+DV TF++L +WR EFL QA P + E PFV+L
Sbjct: 64 TAGQERFQSLSVAFYRGADCCVLVFDVTAPNTFKTLDSWRLEFLIQASPRDPENFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNKID + +R V K+A W + NIPYFETSAKE N+++AF +A ALK E +
Sbjct: 124 GNKIDLE---NRQVATKRAQAWSYSKNNIPYFETSAKEAINVEQAFQTIARNALKQETEV 180
Query: 188 IYY----QPQGISETVSEVEQRGGCAC 210
Y +P + + C+C
Sbjct: 181 ELYNEFPEPMKLDKNDRAKTSAESCSC 207
>sp|Q95UJ0|RAB7A_PAROT Ras-related protein Rab-7a OS=Paramecium octaurelia GN=Rab7a PE=1
SV=2
Length = 206
Score = 234 bits (597), Expect = 3e-61, Method: Compositional matrix adjust.
Identities = 111/204 (54%), Positives = 149/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + KA +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKAQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + ++GGC
Sbjct: 182 EIFFPTTVTLTKQSQKPQAKQGGC 205
>sp|Q6DUB4|RAB7B_PAROT Ras-related protein Rab-7b OS=Paramecium octaurelia GN=Rab7b PE=1
SV=1
Length = 206
Score = 234 bits (596), Expect = 4e-61, Method: Compositional matrix adjust.
Identities = 110/204 (53%), Positives = 150/204 (73%), Gaps = 5/204 (2%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
+++ L K+I+LGDSGVGKTSLMNQYV +F+QQY+AT+GADF+ KE+ +DD++VTLQIWD
Sbjct: 4 QKKQLFKIIILGDSGVGKTSLMNQYVNARFTQQYRATVGADFMAKEVMIDDRMVTLQIWD 63
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
TAGQERFQSLG AFYRGADCCVLVYD+ K+F+SL +WR+EFL Q P + E PFV+L
Sbjct: 64 TAGQERFQSLGGAFYRGADCCVLVYDITNPKSFDSLDSWRDEFLMQGQPKDPEHFPFVVL 123
Query: 128 GNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHKD 187
GNK+D + R V + K+ +WC GNI +FE SAK+ NI++AF +A+ A E +
Sbjct: 124 GNKLDK--ATERKVQESKSQQWCKSHGNIQFFEVSAKDATNIEQAFQDIAKAAASQEKDE 181
Query: 188 IYYQPQGISETVSEVE---QRGGC 208
+ P ++ T + + ++GGC
Sbjct: 182 EIFFPTTVTLTKQDPKKQTKQGGC 205
>sp|P32939|YPT7_YEAST GTP-binding protein YPT7 OS=Saccharomyces cerevisiae (strain ATCC
204508 / S288c) GN=YPT7 PE=1 SV=1
Length = 208
Score = 220 bits (561), Expect = 5e-57, Method: Compositional matrix adjust.
Identities = 107/181 (59%), Positives = 138/181 (76%), Gaps = 2/181 (1%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMD-DKLVTLQIW 66
+++N+LKVI+LGDSGVGKTSLM++YV +K+SQQYKATIGADF+TKE+ +D DK+ T+Q+W
Sbjct: 4 RKKNILKVIILGDSGVGKTSLMHRYVNDKYSQQYKATIGADFLTKEVTVDGDKVATMQVW 63
Query: 67 DTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVL 126
DTAGQERFQSLG AFYRGADCCVLVYDV +FE++++WR+EFL A+ E PFV+
Sbjct: 64 DTAGQERFQSLGVAFYRGADCCVLVYDVTNASSFENIKSWRDEFLVHANVNSPETFPFVI 123
Query: 127 LGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK 186
LGNKID + S ++V +K A E G+IP F TSAK N+D AF +A AL+
Sbjct: 124 LGNKIDAE-ESKKIVSEKSAQELAKSLGDIPLFLTSAKNAINVDTAFEEIARSALQQNQA 182
Query: 187 D 187
D
Sbjct: 183 D 183
>sp|Q9HDY0|YPT71_SCHPO GTP-binding protein ypt71 OS=Schizosaccharomyces pombe (strain 972
/ ATCC 24843) GN=ypt71 PE=3 SV=1
Length = 208
Score = 218 bits (555), Expect = 2e-56, Method: Compositional matrix adjust.
Identities = 106/182 (58%), Positives = 143/182 (78%), Gaps = 4/182 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
++ ++R LKV++LGDSGVGKT LMNQ+V KFS++YKATIGADF+TK++ +DDKLVTLQ
Sbjct: 1 MSAQKRVFLKVVILGDSGVGKTCLMNQFVNQKFSREYKATIGADFLTKDVVVDDKLVTLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
+WDTAGQERFQSLG AFYRGADCCV+VY+VN K+F+S++NWR+EFL Q E A PF
Sbjct: 61 LWDTAGQERFQSLGMAFYRGADCCVIVYNVNNSKSFDSVENWRQEFLYQTSQDEC-AFPF 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYR--GNIPYFETSAKEDCNIDEAFLCVAEIALK 182
+++GN+ID D S R V +AL++C + N+ +FE SAKE+ N+ + F V+ +AL+
Sbjct: 120 IIVGNQIDKD-ASKRAVSLHRALDYCKSKHGSNMIHFEASAKENTNVTDLFETVSRLALE 178
Query: 183 NE 184
NE
Sbjct: 179 NE 180
>sp|Q948K6|RABG1_ARATH Ras-related protein RABG1 OS=Arabidopsis thaliana GN=RABG1 PE=2
SV=1
Length = 204
Score = 216 bits (549), Expect = 1e-55, Method: Compositional matrix adjust.
Identities = 106/199 (53%), Positives = 138/199 (69%), Gaps = 1/199 (0%)
Query: 13 LKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQE 72
LK+I+LGDSGVGKTSL+ +Y F Q + +TI D VTKE+ + ++ V LQIWDTAGQE
Sbjct: 6 LKIILLGDSGVGKTSLLKRYNDKDFKQLHNSTIYVDLVTKEICIAERQVILQIWDTAGQE 65
Query: 73 RFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKID 132
RF+SL S FYR DCCVLVYDVN KTFES+ NW +EF+KQA+P PFVL+GNK D
Sbjct: 66 RFKSLPSRFYRDTDCCVLVYDVNTLKTFESIDNWHDEFIKQANPETPTKFPFVLMGNKTD 125
Query: 133 TDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALKNEHK-DIYYQ 191
+ G RVV ++ A +WC +GNI YFETSAK N++EAFL +A+ AL NE + D +
Sbjct: 126 VNNGKPRVVAKEIADQWCGSKGNIVYFETSAKAKINVEEAFLEIAKKALTNERQIDDMER 185
Query: 192 PQGISETVSEVEQRGGCAC 210
+ + T+ + R C+C
Sbjct: 186 YRSVVPTIEKETPRSRCSC 204
>sp|P24408|RAB9A_CANFA Ras-related protein Rab-9A OS=Canis familiaris GN=RAB9A PE=1 SV=2
Length = 201
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>sp|P51151|RAB9A_HUMAN Ras-related protein Rab-9A OS=Homo sapiens GN=RAB9A PE=1 SV=1
Length = 201
Score = 188 bits (478), Expect = 2e-47, Method: Compositional matrix adjust.
Identities = 89/165 (53%), Positives = 120/165 (72%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L KVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKVILLGDGGVGKSSLMNRYVTNKFDTQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NKID S R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKIDI---SERQVSTEEAQAWCRDNGDYPYFETSAKDATNVAAAF 165
>sp|Q8BHH2|RAB9B_MOUSE Ras-related protein Rab-9B OS=Mus musculus GN=Rab9b PE=2 SV=1
Length = 201
Score = 187 bits (476), Expect = 3e-47, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + + PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPDHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC GN PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGNYPYLETSAKDDTNVTVAF 165
>sp|Q9NP90|RAB9B_HUMAN Ras-related protein Rab-9B OS=Homo sapiens GN=RAB9B PE=1 SV=1
Length = 201
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQTWCMENGDYPYLETSAKDDTNVTVAF 165
>sp|Q5R4W9|RAB9B_PONAB Ras-related protein Rab-9B OS=Pongo abelii GN=RAB9B PE=2 SV=1
Length = 201
Score = 187 bits (475), Expect = 5e-47, Method: Compositional matrix adjust.
Identities = 89/162 (54%), Positives = 120/162 (74%), Gaps = 3/162 (1%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
LLKVI+LGD GVGK+SLMN+YV NKF Q TIG +F+ ++L++D + VTLQIWDTAGQ
Sbjct: 7 LLKVILLGDGGVGKSSLMNRYVTNKFDSQAFHTIGVEFLNRDLEVDGRFVTLQIWDTAGQ 66
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF+SL + FYRGADCC+L + V+ +++FE+L NW++EF+ AD + E PFV+LGNK+
Sbjct: 67 ERFKSLRTPFYRGADCCLLTFSVDDRQSFENLGNWQKEFIYYADVKDPEHFPFVVLGNKV 126
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
D + R V ++A WC G+ PY ETSAK+D N+ AF
Sbjct: 127 DKE---DRQVTTEEAQAWCMENGDYPYLETSAKDDTNVTVAF 165
>sp|Q9R0M6|RAB9A_MOUSE Ras-related protein Rab-9A OS=Mus musculus GN=Rab9a PE=1 SV=1
Length = 201
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>sp|Q99P75|RAB9A_RAT Ras-related protein Rab-9A OS=Rattus norvegicus GN=Rab9a PE=1 SV=2
Length = 201
Score = 185 bits (469), Expect = 2e-46, Method: Compositional matrix adjust.
Identities = 86/165 (52%), Positives = 118/165 (71%), Gaps = 3/165 (1%)
Query: 9 RRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDT 68
+ +L K+I+LGD GVGK+SLMN+YV NKF Q TIG +F+ K+L++D VT+QIWDT
Sbjct: 4 KSSLFKIILLGDGGVGKSSLMNRYVTNKFDSQLFHTIGVEFLNKDLEVDGHFVTMQIWDT 63
Query: 69 AGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLG 128
AGQERF+SL + FYRG+DCC+L + V+ ++F++L NW++EF+ AD E E+ PFV+LG
Sbjct: 64 AGQERFRSLRTPFYRGSDCCLLTFSVDDSQSFQNLSNWKKEFIYYADVKEPESFPFVILG 123
Query: 129 NKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAF 173
NK D R V ++A WC G+ PYFETSAK+ N+ AF
Sbjct: 124 NKTDI---KERQVSTEEAQAWCKDNGDYPYFETSAKDSTNVAAAF 165
>sp|Q96AH8|RAB7B_HUMAN Ras-related protein Rab-7b OS=Homo sapiens GN=RAB7B PE=2 SV=1
Length = 199
Score = 161 bits (408), Expect = 2e-39, Method: Compositional matrix adjust.
Identities = 82/177 (46%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + + D + LQ
Sbjct: 1 MNPRKKVDLKLIIVGAIGVGKTSLLHQYVHKTFYEEYQTTLGASILSKIIILGDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR + L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDLESFEALDIWRGDVLAKIVPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
VLLGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VLLGNKIDL---ADRKVPQEVAQGWCREK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>sp|Q08DE8|RAB7B_BOVIN Ras-related protein Rab-7b OS=Bos taurus GN=RAB7B PE=2 SV=1
Length = 200
Score = 161 bits (408), Expect = 3e-39, Method: Compositional matrix adjust.
Identities = 81/177 (45%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL+++YV+ F + Y+ T+GA ++K + ++D + LQ
Sbjct: 1 MNPRKKVDLKLIIIGALGVGKTSLLHRYVHKTFYEDYQTTLGASILSKIIILEDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D CVL +DV ++FE+L+ WR + L + P E + P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCVLAFDVTDLESFEALETWRGDVLAKTIPME-QPYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R VPQ+ A WC + +IPYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRQVPQEVAQGWCKEK-DIPYFEVSAKNDINVVQAFEMLASRAL 172
>sp|Q8VEA8|RAB7B_MOUSE Ras-related protein Rab-7b OS=Mus musculus GN=Rab7b PE=1 SV=1
Length = 199
Score = 159 bits (401), Expect = 2e-38, Method: Compositional matrix adjust.
Identities = 79/177 (44%), Positives = 121/177 (68%), Gaps = 5/177 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+N +++ LK+I++G GVGKTSL++QYV+ F ++Y+ T+GA ++K + +DD + LQ
Sbjct: 1 MNPRKKVDLKLIIVGALGVGKTSLLHQYVHKTFFEEYQTTLGASILSKIIILDDTTLKLQ 60
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPF 124
IWDT GQERF+S+ S FY+G+D C+L +DV ++FE+L WR++ L + P E ++ P
Sbjct: 61 IWDTGGQERFRSMVSTFYKGSDGCILAFDVTDPESFEALDIWRDDVLAKIIPME-QSYPM 119
Query: 125 VLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIAL 181
V+LGNKID + R V Q+ WC + ++PYFE SAK D N+ +AF +A AL
Sbjct: 120 VVLGNKIDLE---DRKVSQEVVHGWCKEK-DMPYFEVSAKNDINVVQAFEVLASRAL 172
>sp|Q54K69|RAB7B_DICDI Ras-related protein Rab-7B OS=Dictyostelium discoideum GN=rab7B
PE=3 SV=1
Length = 197
Score = 155 bits (391), Expect = 2e-37, Method: Compositional matrix adjust.
Identities = 76/168 (45%), Positives = 117/168 (69%), Gaps = 10/168 (5%)
Query: 8 KRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWD 67
K R ++KV+++G+ VGKTS++ +YV +F K TIG DFV + + +VTLQ+WD
Sbjct: 3 KGRKIIKVVIIGEKSVGKTSILRRYVDKRFVT-LKPTIGVDFV----MVSENMVTLQLWD 57
Query: 68 TAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLL 127
T+GQERF+SL ++YRGAD C+LV+DV +KT L+ WR++F+++ + + PF++L
Sbjct: 58 TSGQERFRSLEISYYRGADYCILVFDVTNEKTLYDLKLWRDDFIEKTEIRDPILFPFIIL 117
Query: 128 GNKIDTDGGSSRVVPQKKALEWCA--YRGNIPYFETSAKEDCNIDEAF 173
GNKID +RVV +K A++WC GN+ YF+TSAK++ NI++ F
Sbjct: 118 GNKID---DPNRVVTEKAAIQWCKDNIGGNLTYFDTSAKDNINIEQVF 162
>sp|Q54P07|RB32D_DICDI Ras-related protein Rab-32D OS=Dictyostelium discoideum GN=rab32D
PE=3 SV=1
Length = 228
Score = 143 bits (360), Expect = 9e-34, Method: Compositional matrix adjust.
Identities = 69/182 (37%), Positives = 117/182 (64%), Gaps = 5/182 (2%)
Query: 5 VNMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQ 64
+NM LK+I++GD VGKTS++++ +++KF+++YK+TIGADF++K +D + +Q
Sbjct: 2 INMTETKQLKLILIGDVNVGKTSILHRLIFSKFTEEYKSTIGADFLSKTFYQNDIITHIQ 61
Query: 65 IWDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEF-LKQADP-GEHEAC 122
+WDTAGQE++ L SAF+R +D +LV+D++ + +F +L W ++F K +P G +
Sbjct: 62 LWDTAGQEKYWCLTSAFWRTSDAVILVFDISNESSFRNLNFWYKQFKSKSINPDGTEKQL 121
Query: 123 PFVLLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
P +LL NK D+ +R V Q + +WC Y+E SAK NI E+ L + E+ ++
Sbjct: 122 PILLLANKSDS---LTRAVDQSEINQWCTDHKVNLYYEVSAKSSINIKESILKLVEVIIE 178
Query: 183 NE 184
+
Sbjct: 179 QD 180
>sp|Q9LH50|RAA4D_ARATH Ras-related protein RABA4d OS=Arabidopsis thaliana GN=RABA4D PE=1
SV=1
Length = 222
Score = 142 bits (357), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 77/171 (45%), Positives = 109/171 (63%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGKT L+ ++ N+FS KATIG +F TK L +D+K V QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKTQLLARFARNEFSVDSKATIGVEFQTKTLVIDNKTVKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDMTKRQSFDHMAKWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK D GS R VP + A E+ A R N+ + ETSA E N++ AFL +
Sbjct: 125 LIGNKCDL--GSLRAVPTEDAQEF-AQRENLFFMETSALEATNVETAFLTI 172
>sp|P35286|RAB13_RAT Ras-related protein Rab-13 OS=Rattus norvegicus GN=Rab13 PE=2 SV=2
Length = 203
Score = 141 bits (355), Expect = 4e-33, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 115/173 (66%), Gaps = 8/173 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + ++++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVEIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRKVQREQA-ERLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>sp|Q9DD03|RAB13_MOUSE Ras-related protein Rab-13 OS=Mus musculus GN=Rab13 PE=1 SV=1
Length = 202
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 74/173 (42%), Positives = 114/173 (65%), Gaps = 8/173 (4%)
Query: 11 NLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAG 70
+L K++++GDSGVGKT L+ ++ + F+ Y +TIG DF + + ++ K + LQ+WDTAG
Sbjct: 7 HLFKLLLIGDSGVGKTCLIIRFAEDNFNSTYISTIGIDFKIRTVDIEGKRIKLQVWDTAG 66
Query: 71 QERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNK 130
QERF+++ +A+YRGA +LVYD+ +K+FE++QNW + + A G +LLGNK
Sbjct: 67 QERFKTITTAYYRGAMGIILVYDITDEKSFENIQNWMKSIKENASAG----VERLLLGNK 122
Query: 131 IDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVA-EIALK 182
D + + R V +++A E A I +FETSAK N+DEAF +A +I LK
Sbjct: 123 CDME--AKRQVQREQA-EKLAREHRIRFFETSAKSSVNVDEAFSSLARDILLK 172
>sp|P25766|RLGP1_ORYSJ Ras-related protein RGP1 OS=Oryza sativa subsp. japonica GN=RGP1
PE=2 SV=2
Length = 226
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 71/165 (43%), Positives = 109/165 (66%), Gaps = 7/165 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
+ KV+++GDS VGK+ L+ ++ N+F+ KATIG +F T+ L +D + V QIWDTAGQ
Sbjct: 18 VFKVVLIGDSAVGKSQLLARFARNEFNLDSKATIGVEFQTRTLHIDARTVKAQIWDTAGQ 77
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ER++++ SA+YRGA +LVYD+ +++F+ + W EE AD + +L+GNK
Sbjct: 78 ERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHAD----KNIVIMLIGNK- 132
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
+D G+ RVVP + A E+ A R N+ + ETSA E N++ AF+ V
Sbjct: 133 -SDLGTLRVVPTEDAKEF-AERENLFFMETSALESTNVENAFMTV 175
>sp|Q9FE79|RAA4C_ARATH Ras-related protein RABA4c OS=Arabidopsis thaliana GN=RABA4C PE=2
SV=1
Length = 223
Score = 139 bits (350), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 73/171 (42%), Positives = 111/171 (64%), Gaps = 7/171 (4%)
Query: 6 NMKRRNLLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQI 65
N K + KV+++GDS VGK+ L+ ++ N+FS + KATIG +F T+ L++D K + QI
Sbjct: 9 NQKIDYVFKVVLIGDSAVGKSQLLARFSRNEFSIESKATIGVEFQTRTLEIDRKTIKAQI 68
Query: 66 WDTAGQERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFV 125
WDTAGQER++++ SA+YRGA +LVYD+ +++F+ + W EE AD +
Sbjct: 69 WDTAGQERYRAVTSAYYRGAVGAMLVYDITKRQSFDHVARWLEELRGHADKN----IVIM 124
Query: 126 LLGNKIDTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCV 176
L+GNK TD G+ R VP + A E+ A R N+ + ETSA + N++ +FL V
Sbjct: 125 LIGNK--TDLGTLRAVPTEDAKEF-AQRENLFFMETSALDSNNVEPSFLTV 172
>sp|Q5R5U1|RAB10_PONAB Ras-related protein Rab-10 OS=Pongo abelii GN=RAB10 PE=2 SV=1
Length = 200
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
>sp|P61027|RAB10_MOUSE Ras-related protein Rab-10 OS=Mus musculus GN=Rab10 PE=1 SV=1
Length = 200
Score = 139 bits (349), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 74/171 (43%), Positives = 110/171 (64%), Gaps = 7/171 (4%)
Query: 12 LLKVIVLGDSGVGKTSLMNQYVYNKFSQQYKATIGADFVTKELQMDDKLVTLQIWDTAGQ 71
L K++++GDSGVGKT ++ ++ + F+ + +TIG DF K +++ K + LQIWDTAGQ
Sbjct: 9 LFKLLLIGDSGVGKTCVLFRFSDDAFNTTFISTIGIDFKIKTVELQGKKIKLQIWDTAGQ 68
Query: 72 ERFQSLGSAFYRGADCCVLVYDVNVQKTFESLQNWREEFLKQADPGEHEACPFVLLGNKI 131
ERF ++ +++YRGA +LVYD+ K+FE++ W L+ D +E +LLGNK
Sbjct: 69 ERFHTITTSYYRGAMGIMLVYDITNGKSFENISKW----LRNIDEHANEDVERMLLGNKC 124
Query: 132 DTDGGSSRVVPQKKALEWCAYRGNIPYFETSAKEDCNIDEAFLCVAEIALK 182
D D RVVP+ K E A I +FETSAK + NI++AFL +AE L+
Sbjct: 125 DMD--DKRVVPKGKG-EQIAREHGIRFFETSAKANINIEKAFLTLAEDILR 172
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.135 0.407
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 76,224,793
Number of Sequences: 539616
Number of extensions: 3060714
Number of successful extensions: 16573
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 913
Number of HSP's successfully gapped in prelim test: 547
Number of HSP's that attempted gapping in prelim test: 14290
Number of HSP's gapped (non-prelim): 1525
length of query: 210
length of database: 191,569,459
effective HSP length: 112
effective length of query: 98
effective length of database: 131,132,467
effective search space: 12850981766
effective search space used: 12850981766
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 58 (26.9 bits)