Query 028312
Match_columns 210
No_of_seqs 215 out of 1128
Neff 5.1
Searched_HMMs 29240
Date Mon Mar 25 15:39:03 2013
Command hhsearch -i /work/01045/syshi/csienesis_hhblits_a3m/028312.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/028312hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3cn5_A Aquaporin; membrane pro 100.0 8.2E-34 2.8E-38 254.0 13.1 127 50-182 23-149 (304)
2 3iyz_A Aquaporin-4; water tran 99.9 7.7E-27 2.6E-31 211.7 12.9 114 62-182 21-139 (340)
3 1j4n_A Aquaporin 1; membrane p 99.9 1.7E-25 5.7E-30 196.9 12.6 123 80-207 3-131 (271)
4 2zz9_A Aquaporin-4; water tran 99.9 1.2E-24 4.2E-29 194.5 12.8 98 78-182 3-100 (301)
5 3c02_A Aquaglyceroporin; membr 99.9 1.4E-24 4.8E-29 189.6 10.6 115 85-208 7-132 (258)
6 3llq_A Aquaporin Z 2; aquapori 99.9 2.9E-24 9.8E-29 188.2 10.9 93 82-182 24-116 (256)
7 3d9s_A Aquaporin-5, AQP-5; aqu 99.9 3.2E-24 1.1E-28 188.5 10.9 94 78-182 2-95 (266)
8 3gd8_A Aquaporin-4; proton exc 99.9 2.2E-24 7.6E-29 184.9 9.4 90 86-182 2-91 (223)
9 1ldf_A Glycerol uptake facilit 99.9 1.4E-24 4.7E-29 191.7 6.9 89 85-182 5-93 (281)
10 2f2b_A Aquaporin AQPM; protein 99.9 4.9E-24 1.7E-28 184.8 10.1 97 86-182 3-107 (246)
11 2o9g_A Aquaporin Z; integral m 99.9 1E-23 3.5E-28 181.8 10.7 88 87-182 4-91 (234)
12 2w2e_A AQY1, aquaporin, aquapo 99.9 1.2E-23 4E-28 186.2 11.1 95 86-182 43-137 (279)
13 2b6o_A Aquaporin-0, lens fiber 99.9 4.2E-23 1.4E-27 180.9 13.2 92 80-182 2-93 (263)
14 2f2b_A Aquaporin AQPM; protein 99.5 1.8E-13 6.1E-18 118.4 10.0 83 86-182 142-229 (246)
15 2b6o_A Aquaporin-0, lens fiber 99.1 3.5E-10 1.2E-14 98.9 10.3 83 86-182 126-208 (263)
16 2w2e_A AQY1, aquaporin, aquapo 99.1 5.4E-10 1.9E-14 98.6 10.0 84 85-182 166-249 (279)
17 2o9g_A Aquaporin Z; integral m 99.0 4.8E-10 1.7E-14 96.3 8.8 82 86-182 133-215 (234)
18 3d9s_A Aquaporin-5, AQP-5; aqu 99.0 7.8E-10 2.7E-14 97.0 9.4 83 86-182 128-211 (266)
19 3llq_A Aquaporin Z 2; aquapori 99.0 6.9E-10 2.3E-14 97.0 8.5 83 85-182 155-238 (256)
20 3cn5_A Aquaporin; membrane pro 99.0 5.1E-10 1.8E-14 100.0 7.4 89 85-182 182-272 (304)
21 2zz9_A Aquaporin-4; water tran 99.0 1.4E-09 4.9E-14 97.1 8.7 83 86-182 133-215 (301)
22 3iyz_A Aquaporin-4; water tran 98.9 2.2E-09 7.4E-14 97.5 8.9 83 86-182 172-254 (340)
23 3gd8_A Aquaporin-4; proton exc 98.9 3.2E-09 1.1E-13 90.7 9.1 83 86-182 124-206 (223)
24 1ldf_A Glycerol uptake facilit 98.9 3.8E-09 1.3E-13 93.0 9.3 85 86-182 144-240 (281)
25 3c02_A Aquaglyceroporin; membr 98.9 3E-09 1E-13 92.6 7.7 84 88-182 135-227 (258)
26 1j4n_A Aquaporin 1; membrane p 98.9 3.8E-09 1.3E-13 92.7 8.4 81 88-182 138-218 (271)
27 3s2u_A UDP-N-acetylglucosamine 70.3 0.46 1.6E-05 41.5 -1.9 21 148-168 8-28 (365)
28 4g9j_C Synthetic peptide, seri 33.5 5 0.00017 22.8 -1.0 6 16-21 6-11 (26)
29 3ixz_A Potassium-transporting 23.9 54 0.0018 33.0 3.7 12 86-97 97-108 (1034)
No 1
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=100.00 E-value=8.2e-34 Score=254.00 Aligned_cols=127 Identities=66% Similarity=1.104 Sum_probs=86.6
Q ss_pred cccccccccccCCCCCCCCCCCCCCCCcchhhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcc
Q 028312 50 PMAKDTGVAEHGSYSAKDYTDPPPEPLFDAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVG 129 (210)
Q Consensus 50 ~m~~~~~~~~~~~~~~kdy~~pppap~~~~~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g 129 (210)
-|+||++.++++.+++|||+||||+|++|.+|+++|+++|++++||+||++|+|++++++++..... +++...+
T Consensus 23 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~~~~r~~lAEfiGT~lLv~~g~gsv~~~~~~~------~~~~~~g 96 (304)
T 3cn5_A 23 LMSKEVSEEAQAHQHGKDYVDPPPAPFFDLGELKLWSFWRAAIAEFIATLLFLYITVATVIGHSKET------VVCGSVG 96 (304)
T ss_dssp --------------------------------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCC------STTCSCH
T ss_pred HHHHHhhccccccccCCCccCCCcccccCccccccHHHHHHHHHHHHHHHHHHHHHhHHHeEecccc------CCCCCCC
Confidence 3788865322234568999999999999999999999999999999999999999999988754322 1234457
Q ss_pred hhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHhccCcchhhHHHHHHH
Q 028312 130 ILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 130 ~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~l~gkis~~r~~~YiiAQ 182 (210)
++.++|+||+++++++|++++|||||+|||||+++++.|+++|.++++|++||
T Consensus 97 ~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~l~g~~~~~~~~~YiiAQ 149 (304)
T 3cn5_A 97 LLGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVELLRALVYMIAQ 149 (304)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHHHTTSSCHHHHHHHHHHH
T ss_pred ceeehhhhhhhhheeeeEeeccCCCccCcHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999
No 2
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=99.94 E-value=7.7e-27 Score=211.72 Aligned_cols=114 Identities=31% Similarity=0.497 Sum_probs=97.7
Q ss_pred CCCCCCCCCCCCCCCcc-----hhhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHH
Q 028312 62 SYSAKDYTDPPPEPLFD-----AVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWA 136 (210)
Q Consensus 62 ~~~~kdy~~pppap~~~-----~~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAla 136 (210)
+-..|||.||++.|-.. ..|+..+++||++++||+||++|+|++++++++.... +...+.+++.++++
T Consensus 21 ~~~~~~~~~~~~~ps~~~~~~~~~~~~~~~l~r~~lAEflGT~lLV~~G~Gs~a~~~~~-------~~~~~~g~l~Iala 93 (340)
T 3iyz_A 21 QMGRDLYDDDDKDPSSRSIMVAFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-------ENPLPVDMVLISLC 93 (340)
T ss_pred hcCCCCCCCCCCCCcchhhhhhhhhhchHHHHHHHHHHHHHHHHHHHHHHHHHHhcccC-------CCCCCcchHHHHHH
Confidence 33579999999999332 3466667999999999999999999999998854211 12234568899999
Q ss_pred HHHHHHHHHHHhcCCCCcccChHHHHHHHHhccCcchhhHHHHHHH
Q 028312 137 FGGMIFVLVYCTAGISGGHINPAVTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 137 fGl~I~vlIy~~g~ISGgHlNPAVTfal~l~gkis~~r~~~YiiAQ 182 (210)
||+++++++|++++|||||+|||||+++++.|+++|.++++|++||
T Consensus 94 ~GlaV~~~v~~~g~ISGAHlNPAVTlal~l~G~~~~~~~~~YiiAQ 139 (340)
T 3iyz_A 94 FGLSIATMVQCFGHISGGHINPAVTVAMVCTRKISIAKSVFYITAQ 139 (340)
T ss_pred HHHHHHHheeEeeccCcCeeChHHHHHHHHcCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999
No 3
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=99.93 E-value=1.7e-25 Score=196.91 Aligned_cols=123 Identities=33% Similarity=0.509 Sum_probs=95.7
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChH
Q 028312 80 VELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPA 159 (210)
Q Consensus 80 ~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPA 159 (210)
+|+++++++|++++||+||++|+|++++++++...... .+++.....+++.++++||+++++++|++++|||||+|||
T Consensus 3 ~e~~~~~~~r~~~aEflGT~llv~~g~g~~~~~~~~~~--~~~~~g~~~~~~~ial~~Gl~v~~~i~~~g~iSGaHlNPA 80 (271)
T 1j4n_A 3 SEFKKKLFWRAVVAEFLAMILFIFISIGSALGFHYPIK--SNQTTGAVQDNVKVSLAFGLSIATLAQSVGHISGAHLNPA 80 (271)
T ss_dssp STTHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGCCCS--SCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHH
T ss_pred cccccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccc--cccccCcccchHHHHHHHHHHHHHHHHHHhcCCcceEcHH
Confidence 58889999999999999999999999998876542110 0111122245789999999999999999999999999999
Q ss_pred HHHHHHHhccCcchhhHHHHHHH--HH----HHHhHhhhhccCCCCceeeeeec
Q 028312 160 VTFGLFLARKVSLVRAVMWGQRA--GR----WVQHRRWIGRRDHRHLCLGLHCL 207 (210)
Q Consensus 160 VTfal~l~gkis~~r~~~YiiAQ--ga----~l~y~~~~~~~~~~~~~~g~fct 207 (210)
||+++++.|+++|.+++.|++|| |+ .+.|..+ .+++...+|.+|+
T Consensus 81 VTla~~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~---~~~~~~~~g~~~~ 131 (271)
T 1j4n_A 81 VTLGLLLSCQISVLRAIMYIIAQCVGAIVATAILSGIT---SSLPDNSLGLNAL 131 (271)
T ss_dssp HHHHHHHTTSSCHHHHHHHHHHHHHHHHHHHHHHHHHT---TTCTTCCTTCCCC
T ss_pred HHHHHHHcCCCCHHHHHHHHHHHHHHHHHHHHHHHHHc---cCCcccccccccC
Confidence 99999999999999999999999 33 3333332 2344445565554
No 4
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=99.92 E-value=1.2e-24 Score=194.46 Aligned_cols=98 Identities=33% Similarity=0.536 Sum_probs=83.4
Q ss_pred chhhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccC
Q 028312 78 DAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (210)
Q Consensus 78 ~~~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlN 157 (210)
+.+|+.++++||++++||+||++|+|++++++++.... +.....+++.++++||+++++++|++++|||||+|
T Consensus 3 ~~~~~~~~~~~r~~lAEflGT~lLv~~g~Gs~~~~~~~-------~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlN 75 (301)
T 2zz9_A 3 AFKGVWTQAFWKAVTAEFLAMLIFVLLSVGSTINWGGS-------ENPLPVDMVLISLCFGLSIATMVQCFGHISGGHIN 75 (301)
T ss_dssp -----CCHHHHHHHHHHHHHHHHHHHHHHTTSCCTTCC--------CCCCCCHHHHHHHHHHHHHHHHHHHGGGTCCCCS
T ss_pred cccccccHHHHHHHHHHHHHHHHHHHHHHHHHhccccC-------CCCCCcchHHHHHHHHHHHHHhhheeccCCcceeC
Confidence 45688889999999999999999999999988754321 11234568899999999999999999999999999
Q ss_pred hHHHHHHHHhccCcchhhHHHHHHH
Q 028312 158 PAVTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 158 PAVTfal~l~gkis~~r~~~YiiAQ 182 (210)
||||+++++.|+++|.++++|++||
T Consensus 76 PAVTla~~~~g~~~~~~~~~YiiAQ 100 (301)
T 2zz9_A 76 PAVTVAMVCTRKISIAKSVFYITAQ 100 (301)
T ss_dssp HHHHHHHHHTSSSCTTTTHHHHHHH
T ss_pred hHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999999999999999999999
No 5
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=99.91 E-value=1.4e-24 Score=189.61 Aligned_cols=115 Identities=18% Similarity=0.290 Sum_probs=93.3
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHH
Q 028312 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (210)
Q Consensus 85 ~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal 164 (210)
++++|++++||+||++|+|++++++++..... ...+++.++++||+++++++|++++|||||+|||||+++
T Consensus 7 ~~~~~~~~aEflGT~~lv~~G~g~~~~~~~~~---------~~~~~l~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 77 (258)
T 3c02_A 7 KSYVREFIGEFLGTFVLMFLGEGATANFHTTG---------LSGDWYKLCLGWGLAVFFGILVSAKLSGAHLNLAVSIGL 77 (258)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSS---------STTCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhcccCC---------CCccHHHHHHHHHHHHHHHHheecccCcCeeChHHHHHH
Confidence 46799999999999999999999877543211 123688999999999999999999999999999999999
Q ss_pred HHhccCcchhhHHHHHHH------H---HHHHhHhhhhccCCCCc--eeeeeecc
Q 028312 165 FLARKVSLVRAVMWGQRA------G---RWVQHRRWIGRRDHRHL--CLGLHCLL 208 (210)
Q Consensus 165 ~l~gkis~~r~~~YiiAQ------g---a~l~y~~~~~~~~~~~~--~~g~fct~ 208 (210)
++.|+++|.+++.|++|| + ++..|..+++..+++.. ..+.|+|.
T Consensus 78 ~~~g~~~~~~~~~Yi~AQ~lGa~~ga~l~~~~~~~~~~~~~~~~~~~~~~~~~t~ 132 (258)
T 3c02_A 78 SSINKFDLKKIPVYFFAQLLGAFVGTSTVYGLYHGFISNSKIPQFAWETSRNPSI 132 (258)
T ss_dssp HHTTSSCGGGHHHHHHHHHHHHHHHHHHHHHHTHHHHHTTCSCTTCSSCCCCTTS
T ss_pred HHhCCCcHHHHHHHHHHHHHHHHHHHHHHHHHcchhhhhccccccccccccCCCC
Confidence 999999999999999999 2 34445555555555543 45777764
No 6
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.91 E-value=2.9e-24 Score=188.22 Aligned_cols=93 Identities=30% Similarity=0.500 Sum_probs=79.0
Q ss_pred ccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHH
Q 028312 82 LTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVT 161 (210)
Q Consensus 82 l~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVT 161 (210)
+++.+++|++++||+||++|+|+++++++..... +..+.+++.++++||+++++++|++++|||||+|||||
T Consensus 24 ~~~~~l~r~~laEflGT~lLv~~G~G~~~~~~~~--------~~~~~~~l~iala~Glav~~~i~~~g~iSGaHlNPAVT 95 (256)
T 3llq_A 24 FQSYVMGRKLLAEFFGTFWLVFGGCGSAVFAAAF--------PELGIGFTGVALAFGLTVLTMAYAVGGISGGHFNPAVS 95 (256)
T ss_dssp -----CHHHHHHHHHHHHHHHHHHHHHHHHHTTC--------TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccC--------CCCCccHHHHHHHHHHHHHHHHheeeccccceEchHHH
Confidence 3456789999999999999999999987643321 12245689999999999999999999999999999999
Q ss_pred HHHHHhccCcchhhHHHHHHH
Q 028312 162 FGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 162 fal~l~gkis~~r~~~YiiAQ 182 (210)
+++++.|+++|.+++.|++||
T Consensus 96 la~~~~g~~~~~~~~~YiiAQ 116 (256)
T 3llq_A 96 VGLTVAGRFPASSLVPYVIAQ 116 (256)
T ss_dssp HHHHHTTSSCGGGHHHHHHHH
T ss_pred HHHHHhcCCCHHHHHHHHHHH
Confidence 999999999999999999999
No 7
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.91 E-value=3.2e-24 Score=188.49 Aligned_cols=94 Identities=36% Similarity=0.567 Sum_probs=85.0
Q ss_pred chhhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccC
Q 028312 78 DAVELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (210)
Q Consensus 78 ~~~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlN 157 (210)
..+|+++++++|++++||+||++|+|+++++++... ....+++.++++||+++++++|++++|||||+|
T Consensus 2 ~~~e~~~~~~~r~~laEfiGT~~lv~~g~g~~~~~~-----------~~~~~~l~ial~~Glav~~~i~~~g~iSGaHlN 70 (266)
T 3d9s_A 2 SKKEVCSVAFLKAVFAEFLATLIFVFFGLGSALKWP-----------SALPTILQIALAFGLAIGTLAQALGPVSGGHIN 70 (266)
T ss_dssp CHHHHTSHHHHHHHHHHHHHHHHHHHHHHHHHSCCS-----------SSCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCC
T ss_pred ChhhhhChHHHHHHHHHHHHHHHHHHHHHHHHhCCC-----------CCCccHHHHHHHHHHHHHHHHHHHcccCcceEC
Confidence 357999999999999999999999999999875321 112468899999999999999999999999999
Q ss_pred hHHHHHHHHhccCcchhhHHHHHHH
Q 028312 158 PAVTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 158 PAVTfal~l~gkis~~r~~~YiiAQ 182 (210)
||||+++++.|+++|.++++|++||
T Consensus 71 PAVTla~~~~g~~~~~~~~~Yi~AQ 95 (266)
T 3d9s_A 71 PAITLALLVGNQISLLRAFFYVAAQ 95 (266)
T ss_dssp HHHHHHHHHTSSSCHHHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCHHHHHHHHHHH
Confidence 9999999999999999999999999
No 8
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=99.90 E-value=2.2e-24 Score=184.91 Aligned_cols=90 Identities=34% Similarity=0.605 Sum_probs=80.3
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
++||++++||+||++|+|++++++++.... ++..+.+++.++++||+++++++|++++|||||+|||||++++
T Consensus 2 ~~~r~~~aEfiGT~~lv~~g~g~~~~~~~~-------~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaHlNPAVTla~~ 74 (223)
T 3gd8_A 2 AFWKAVTAEFLAMLIFVLLSLGSTINWGGT-------EKPLPVDMVLISLCFGLSIATMVQCFGHISGGHINPAVTVAMV 74 (223)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHTCCTTTT-------TSCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcccC-------CCCCCcchHHHHHHHHHHHHHHHheecccccceEcHHHHHHHH
Confidence 579999999999999999999988754211 1223457889999999999999999999999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+.|+++|.+++.|++||
T Consensus 75 ~~g~~~~~~~~~Yi~AQ 91 (223)
T 3gd8_A 75 CTRKISIAKSVFYIAAQ 91 (223)
T ss_dssp HTTSSCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHH
Confidence 99999999999999999
No 9
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=99.90 E-value=1.4e-24 Score=191.70 Aligned_cols=89 Identities=31% Similarity=0.414 Sum_probs=78.0
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHH
Q 028312 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (210)
Q Consensus 85 ~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal 164 (210)
.+++|++++||+||++|+|++++++++..... ...+.+.++++||+++++++|++++|||||+|||||+++
T Consensus 5 ~~~~~~~laEflGT~~Lv~~G~g~~~~~~l~~---------~~~g~~~ia~~~Glav~~~i~~~g~iSGaHlNPAVTla~ 75 (281)
T 1ldf_A 5 STLKGQCIAEFLGTGLLIFFGVGCVAALKVAG---------ASFGQWEISVIFGLGVAMAIYLTAGVSGAHLNPAVTIAL 75 (281)
T ss_dssp -CHHHHHHHHHHHHHHHHHHHHHHHHHHHHSC---------CCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhccC---------CCCchHHHHHHHHHHHHHHhheecccCcCeeChHHHHHH
Confidence 35799999999999999999999877644321 122455699999999999999999999999999999999
Q ss_pred HHhccCcchhhHHHHHHH
Q 028312 165 FLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 165 ~l~gkis~~r~~~YiiAQ 182 (210)
++.|+++|.++++|++||
T Consensus 76 ~~~g~~~~~~~~~Yi~AQ 93 (281)
T 1ldf_A 76 WLFACFDKRKVIPFIVSQ 93 (281)
T ss_dssp HHHSCCCTTTHHHHHHHH
T ss_pred HHcCCCCHHHHHHHHHHH
Confidence 999999999999999999
No 10
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.90 E-value=4.9e-24 Score=184.76 Aligned_cols=97 Identities=29% Similarity=0.329 Sum_probs=79.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhccc-ccCCCCC-CC-CCC-----CCcchhHHHHHHHHHHHHHHHHhcCCCCcccC
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYK-SQTDPAK-NV-DGC-----AGVGILGIAWAFGGMIFVLVYCTAGISGGHIN 157 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~-~~~~~~~-~~-~~~-----~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlN 157 (210)
+++|++++||+||++|+|++++++++.. ...+... ++ +.. ...+++.++++||+++++++|++++|||||+|
T Consensus 3 ~~~~~~~aEfiGT~~lv~~g~g~~~~~~~l~~~~~~~~~~~~g~~~~~~~~~~~~ia~~~Gl~v~~~v~~~g~iSGaH~N 82 (246)
T 2f2b_A 3 SLTKRCIAEFIGTFILVFFGAGSAAVTLMIASGGTSPNPFNIGIGLLGGLGDWVAIGLAFGFAIAASIYALGNISGCHIN 82 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCSSTTCCSTTTTTTHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCS
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHhhhhccCCccccccccccccccccccchhHHHHHHHHHHHHHhheecccccceeC
Confidence 5789999999999999999999887653 1111000 00 000 12346679999999999999999999999999
Q ss_pred hHHHHHHHHhccCcchhhHHHHHHH
Q 028312 158 PAVTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 158 PAVTfal~l~gkis~~r~~~YiiAQ 182 (210)
||||+++++.|+++|.+++.|++||
T Consensus 83 PAVTla~~~~g~~~~~~~~~Yi~AQ 107 (246)
T 2f2b_A 83 PAVTIGLWSVKKFPGREVVPYIIAQ 107 (246)
T ss_dssp HHHHHHHHHTTSSCGGGHHHHHHHH
T ss_pred HHHHHHHHHhCCCCHHHHHHHHHHH
Confidence 9999999999999999999999999
No 11
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.90 E-value=1e-23 Score=181.79 Aligned_cols=88 Identities=28% Similarity=0.460 Sum_probs=78.0
Q ss_pred HHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHH
Q 028312 87 FYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFL 166 (210)
Q Consensus 87 l~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~l 166 (210)
++|++++||+||++|+|+++++++..... +..+.+++.++++||+++++++|++++|||||+|||||+++++
T Consensus 4 l~r~~~aEf~GT~~lv~~g~g~~~~~~~~--------~~~~~~~l~ia~~~Gl~v~~~i~~~g~iSGaHlNPAVTla~~~ 75 (234)
T 2o9g_A 4 MFRKLAAESFGTFWLVFGGSGSAVLAAGF--------PELGIGFAGVALAFGLTVLTMAFAVGHISGGHFNPAVTIGLWA 75 (234)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTTC--------TTTCCHHHHHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHcccCC--------CCCCcChHHHHHHHHHHHHHHHHHhhccCcceeCHHHHHHHHH
Confidence 68999999999999999999887532211 1123468899999999999999999999999999999999999
Q ss_pred hccCcchhhHHHHHHH
Q 028312 167 ARKVSLVRAVMWGQRA 182 (210)
Q Consensus 167 ~gkis~~r~~~YiiAQ 182 (210)
.|+++|.+++.|++||
T Consensus 76 ~g~~~~~~~~~Yi~aQ 91 (234)
T 2o9g_A 76 GGRFPAKEVVGYVIAQ 91 (234)
T ss_dssp TTSSCHHHHHHHHHHH
T ss_pred hCCCCHHHHHHHHHHH
Confidence 9999999999999999
No 12
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.90 E-value=1.2e-23 Score=186.15 Aligned_cols=95 Identities=28% Similarity=0.470 Sum_probs=78.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+.+|++++||+||++|+|++++++....... ..+++.....+++.++++||+++++++|++++|||||+|||||++++
T Consensus 43 ~~~r~~laEfiGT~~Lv~~g~g~~~~~~~~~--~~~~~~~~~~~~l~iala~Glav~~~v~~~g~iSGaHlNPAVTla~~ 120 (279)
T 2w2e_A 43 NHFIAMSGEFVGTFLFLWSAFVIAQIANQAP--ETPDGGSNPAQLIMISFGFGFGVMVGVFITYRVSGGNLNPAVTLALV 120 (279)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHTTSC--CCGGGCCCHHHHHHHHHHHHHHHHHHHHHHTTTTCCCCSHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHhhccc--cccccCCCCccHHHHHHHHHHHHHHHHHHHhhcCccccChHHHHHHH
Confidence 6789999999999999999988642211100 00111223346789999999999999999999999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+.|+++|.++++|++||
T Consensus 121 ~~g~~~~~~~~~YiiAQ 137 (279)
T 2w2e_A 121 LARAIPPFRGILMAFTQ 137 (279)
T ss_dssp HTTSSCHHHHHHHHHHH
T ss_pred HcCCCCHHHHHHHHHHH
Confidence 99999999999999999
No 13
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.89 E-value=4.2e-23 Score=180.94 Aligned_cols=92 Identities=36% Similarity=0.588 Sum_probs=81.0
Q ss_pred hhccchHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChH
Q 028312 80 VELTKWSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPA 159 (210)
Q Consensus 80 ~el~~~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPA 159 (210)
+|+++++++|++++||+||++|+|+++++++... ....+++.++++||+++++++|+++++||||+|||
T Consensus 2 ~e~~~~~~~~~~laEfiGT~~Lv~~g~g~~~~~~-----------~~~~~~l~i~l~~Gl~v~~~i~~~g~iSGahlNPA 70 (263)
T 2b6o_A 2 WELRSASFWRAIFAEFFATLFYVFFGLGASLRWA-----------PGPLHVLQVALAFGLALATLVQAVGHISGAHVNPA 70 (263)
T ss_dssp ---CHHHHHHHHHHHHHHHHHHHHHHHHHHSCCC-----------SSSCHHHHHHHHHHHHHHHHHHHGGGTTCCCCSHH
T ss_pred ccccchHHHHHHHHHHHHHHHHHHHHHHHHhcCC-----------CCCcchHHHHHHHHHHHHHHHHHhhccCcCeeChH
Confidence 5888899999999999999999999998875321 12236788999999999999999999999999999
Q ss_pred HHHHHHHhccCcchhhHHHHHHH
Q 028312 160 VTFGLFLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 160 VTfal~l~gkis~~r~~~YiiAQ 182 (210)
||+++++.|+++|.++++|++||
T Consensus 71 VTla~~~~g~~~~~~~~~Yi~AQ 93 (263)
T 2b6o_A 71 VTFAFLVGSQMSLLRAICYVVAQ 93 (263)
T ss_dssp HHHHHHHTTCSCHHHHHHHHHHH
T ss_pred HHHHHHHhcCCCHHHHHHHHHHH
Confidence 99999999999999999999999
No 14
>2f2b_A Aquaporin AQPM; protein, integral membrane protein, channel, structural GENO PSI-2, protein structure initiative; 1.68A {Methanothermobacter marburgensis str} PDB: 2evu_A 3ne2_A*
Probab=99.46 E-value=1.8e-13 Score=118.40 Aligned_cols=83 Identities=23% Similarity=0.289 Sum_probs=68.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+.++++++|+++|++|++..+++....+ .. ....++++|+.+++++++++++||+|+|||+||++.
T Consensus 142 ~~~~~~~~E~i~Tf~Lv~~i~~~~~~~~------------~~--~~~~pl~iGl~v~~~~~~~g~~TG~~iNPAr~lgp~ 207 (246)
T 2f2b_A 142 SYWQAMLAEVVGTFLLMITIMGIAVDER------------AP--KGFAGIIIGLTVAGIITTLGNISGSSLNPARTFGPY 207 (246)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTTSTT------------SC--TTCHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHheeeEEecCCC------------CC--CceeeHHHHHHHHHHHhcccccCCCccCHHHHHHHH
Confidence 5689999999999999999876543111 00 113689999999999999999999999999999999
Q ss_pred H-----hccCcchhhHHHHHHH
Q 028312 166 L-----ARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l-----~gkis~~r~~~YiiAQ 182 (210)
+ .++..|.++|+||++|
T Consensus 208 l~~~~~g~~~~w~~~~vy~vap 229 (246)
T 2f2b_A 208 LNDMIFAGTDLWNYYSIYVIGP 229 (246)
T ss_dssp HHHHHHHCCCCGGGTTHHHHHH
T ss_pred HHHHHcCCCCCcceEEEeeeHH
Confidence 8 3456788999999999
No 15
>2b6o_A Aquaporin-0, lens fiber major intrinsic protein; aquaporin-0 junctions, AQP0, lens MIP, lipid-protein interac membrane, lipid bilayer; HET: MC3; 1.90A {Ovis aries} SCOP: f.19.1.1 PDB: 1ymg_A* 2b6p_A 2c32_A 1sor_A 3m9i_A*
Probab=99.10 E-value=3.5e-10 Score=98.91 Aligned_cols=83 Identities=20% Similarity=0.232 Sum_probs=67.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+..+.++.|+++|++|++..++... ... . ...+ ..++++|+.++++..+.++.||+.+|||++|+..
T Consensus 126 s~~~~~~~E~i~Tf~Lv~~il~~~d--~~~-------~--~~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 192 (263)
T 2b6o_A 126 SVGQATIVEIFLTLQFVLCIFATYD--ERR-------N--GRLG--SVALAVGFSLTLGHLFGMYYTGAGMNPARSFAPA 192 (263)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSC--TTS-------C--SSCC--CHHHHHHHHHHHHHHHHTTTSTTCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhc--ccC-------C--CCcc--cHHHHHHHHHHHHHHhccCCCcccccHHHHHHHH
Confidence 4678999999999999998876521 100 0 0111 2678899999999999999999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+... .|...|+||++|
T Consensus 193 l~~~-~~~~~Wvy~vgP 208 (263)
T 2b6o_A 193 ILTR-NFTNHWVYWVGP 208 (263)
T ss_dssp HHHT-CCTTCTHHHHHH
T ss_pred HHcC-CccceeHHHHHH
Confidence 9876 789999999999
No 16
>2w2e_A AQY1, aquaporin, aquaporin PIP2-7 7; yeast, gating, membrane protein; HET: BOG; 1.15A {Komagataella pastoris} PDB: 2w1p_A*
Probab=99.06 E-value=5.4e-10 Score=98.63 Aligned_cols=84 Identities=15% Similarity=0.145 Sum_probs=67.8
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHH
Q 028312 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (210)
Q Consensus 85 ~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal 164 (210)
.+..+.++.|+++|++|++..++...... .. .-..++++|+.++++.++.++.||+.+|||++|+.
T Consensus 166 ~s~~~~~~~E~i~Tf~Lv~~Il~~~~~~~------------~~--~~~~pl~IGl~v~~~~l~~g~~TG~s~NPAR~~GP 231 (279)
T 2w2e_A 166 ASRTRGLFLEAFGTAILCLTVLMLAVEKH------------RA--TWFAPFVIGIALLIAHLICIYYTGAGLNPARSFGP 231 (279)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHTTSCS------------TT--GGGHHHHHHHHHHHHHHHHHHHHCCCCSHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHccCCC------------CC--cCcHHHHHHHHHHHHHHhcccccccccChHHHHHH
Confidence 35688999999999999998876532110 01 11367889999999999999999999999999999
Q ss_pred HHhccCcchhhHHHHHHH
Q 028312 165 FLARKVSLVRAVMWGQRA 182 (210)
Q Consensus 165 ~l~gkis~~r~~~YiiAQ 182 (210)
.+....-+...|+||++|
T Consensus 232 al~~~~~~~~~WVy~vgP 249 (279)
T 2w2e_A 232 AVAARSFPNYHWIYWLGP 249 (279)
T ss_dssp HHHHTCCCTTTTHHHHHH
T ss_pred HHHhccchhhhhHHHHHH
Confidence 998764445789999999
No 17
>2o9g_A Aquaporin Z; integral membrane protein, structural genomics, P protein structure initiative, center for structures of MEMB proteins, CSMP; HET: BOG; 1.90A {Escherichia coli} PDB: 2o9f_A* 2o9d_A* 2o9e_A 1rc2_B* 2abm_A* 3nk5_A* 3nka_A* 3nkc_A*
Probab=99.05 E-value=4.8e-10 Score=96.34 Aligned_cols=82 Identities=20% Similarity=0.158 Sum_probs=66.8
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+.+++++.|+++|++|++..++... +. ...+ ..++.+|+.++++.++.++.||+.+|||++|++.
T Consensus 133 ~~~~~~~~E~i~T~~Lv~~i~~~~d--~~-----------~~~~--~~pl~IGl~v~~~~~~~g~~TG~s~NPAR~lGPa 197 (234)
T 2o9g_A 133 SMLSALVVELVLSAGFLLVIHGATD--KF-----------APAG--FAPIAIGLACTLIHLISIPVTNTSVNPARSTAVA 197 (234)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTS--TT-----------SCTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcC--CC-----------Cccc--hHHHHHHHHHHHHHHHccCCCccccChHHHHHHH
Confidence 5688999999999999998776421 10 0011 3678899999999999999999999999999999
Q ss_pred Hhc-cCcchhhHHHHHHH
Q 028312 166 LAR-KVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~g-kis~~r~~~YiiAQ 182 (210)
+.. ...|...|+||++|
T Consensus 198 l~~g~~~~~~~Wv~~vgP 215 (234)
T 2o9g_A 198 IFQGGWALEQLWFFWVVP 215 (234)
T ss_dssp HHHCSHHHHSHHHHHHHH
T ss_pred HHhCCCCCceeeeeehHH
Confidence 974 34567999999999
No 18
>3d9s_A Aquaporin-5, AQP-5; aquaglyceroporin, membrane protein, water transport, X-RAY diffraction, lipid, phosphatidylserine, PSF, NPA, AR/R, water channel; HET: PS6; 2.00A {Homo sapiens}
Probab=99.03 E-value=7.8e-10 Score=96.97 Aligned_cols=83 Identities=18% Similarity=0.191 Sum_probs=66.2
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+..+.++.|+++|++|++..++.....+ . ...+ ..++++|+.++++....+++||+.+|||++|+..
T Consensus 128 s~~~~~~~E~i~Tf~Lv~~il~~~d~~~--~---------~~~~--~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 194 (266)
T 3d9s_A 128 TQGQAMVVELILTFQLALCIFASTDSRR--T---------SPVG--SPALSIGLSVTLGHLVGIYFTGCSMNPARSFGPA 194 (266)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCTTC--C---------SCCC--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcccC--C---------Cccc--hHHHHHHHHHHHHHHHhhccccccccHHHHHHHH
Confidence 5678999999999999998876531110 0 0011 2678888888888888888999999999999999
Q ss_pred HhccCcchh-hHHHHHHH
Q 028312 166 LARKVSLVR-AVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r-~~~YiiAQ 182 (210)
+... .|.. .|+||++|
T Consensus 195 l~~~-~~~~~~Wvy~vgP 211 (266)
T 3d9s_A 195 VVMN-RFSPAHWVFWVGP 211 (266)
T ss_dssp HHHT-CCCTTHHHHHHHH
T ss_pred HHcC-CcccCEeeeehHH
Confidence 9765 7888 99999999
No 19
>3llq_A Aquaporin Z 2; aquaporin tetramer, membrane protein, water channel, structu genomics, PSI-2, protein structure initiative; 2.01A {Agrobacterium tumefaciens str}
Probab=99.01 E-value=6.9e-10 Score=97.05 Aligned_cols=83 Identities=22% Similarity=0.227 Sum_probs=66.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHH
Q 028312 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (210)
Q Consensus 85 ~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal 164 (210)
.+..++++.|+++|++|+++.++... ... ..+ ..++++|+.++++.++.++.||+.+|||++|++
T Consensus 155 ~s~~~~f~~E~i~Tf~Lv~~il~~~d--~~~-----------~~~--~~pl~IGl~v~~i~~~~g~~TG~a~NPAR~lGP 219 (256)
T 3llq_A 155 YSLVSALLIEIILTAFFLIVILGSTH--GRV-----------PAG--FAPIAIGLALTLIHLISIPVTNTSVNPARSTGQ 219 (256)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHS--TTS-----------CTT--CHHHHHHHHHHHHHHHHHHHHSCCSCHHHHHHH
T ss_pred cCHHHHHHHHHHHHHHHHHHHHHhcC--CCC-----------Ccc--chhHHHHHHHHHHHHHhccccccccChHHHHHH
Confidence 36789999999999999998765431 110 011 267889999999999999999999999999999
Q ss_pred HHh-ccCcchhhHHHHHHH
Q 028312 165 FLA-RKVSLVRAVMWGQRA 182 (210)
Q Consensus 165 ~l~-gkis~~r~~~YiiAQ 182 (210)
.+. +...|...|+||++|
T Consensus 220 al~~g~~~~~~~WVy~vgP 238 (256)
T 3llq_A 220 ALFVGGWALQQLWLFWLAP 238 (256)
T ss_dssp HHHHCHHHHHHTTHHHHHH
T ss_pred HHHcCCCcccceeeeeeHH
Confidence 986 444567899999999
No 20
>3cn5_A Aquaporin; membrane protein, transmembrane, transport, transport protein; 2.05A {Spinacia oleracea} PDB: 3cn6_A 3cll_A 1z98_A 2b5f_A
Probab=99.00 E-value=5.1e-10 Score=100.00 Aligned_cols=89 Identities=21% Similarity=0.212 Sum_probs=67.5
Q ss_pred hHHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHH
Q 028312 85 WSFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGL 164 (210)
Q Consensus 85 ~sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal 164 (210)
.+.+++++.|+++|++|+++.++.... .... .+.-.....++++|+.++++.++++++||+.+|||++|+.
T Consensus 182 ~s~~~~f~~E~i~TfiLv~~Il~~~d~-~~~~--------~~~~~~~lapl~IGl~V~~~~l~~g~~TG~amNPAR~~GP 252 (304)
T 3cn5_A 182 YNKGTALGAEIIGTFVLVYTVFSATDP-KRSA--------RDSHVPILAPLPIGFAVFMVHLATIPITGTGINPARSFGA 252 (304)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHTEEE-EEES--------TTSCCEEECHHHHHHHHHHHHHHHHHHHSCCCCHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHhheecC-ccCC--------CCcccccchHHHHHHHHHHHHHhccCCCccccChHHHHHH
Confidence 356889999999999999988743211 1100 0000011357889999999999999999999999999999
Q ss_pred HHh--ccCcchhhHHHHHHH
Q 028312 165 FLA--RKVSLVRAVMWGQRA 182 (210)
Q Consensus 165 ~l~--gkis~~r~~~YiiAQ 182 (210)
.+. +.-.|...|+||++|
T Consensus 253 al~~~~~~~w~~~WvywvgP 272 (304)
T 3cn5_A 253 AVIFNSNKVWDDQWIFWVGP 272 (304)
T ss_dssp HHHHCCHHHHHHTTHHHHHH
T ss_pred HHHHccCCCcCceEEEeehH
Confidence 997 233788999999999
No 21
>2zz9_A Aquaporin-4; water transport, water channel, two-dimensional crystal, electron diffraction, electron microscopy, membrane protein; HET: PEE; 2.80A {Rattus norvegicus} PDB: 2d57_A
Probab=98.96 E-value=1.4e-09 Score=97.07 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=65.1
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+..++++.|+++|++|++..+++..... .. ..+ ..++++|+.+++++...+++||+.+|||++|++.
T Consensus 133 s~~~~f~~E~i~Tf~Lv~~Il~~~d~~~---------~~--~~~--~~pl~IGl~v~i~~~~g~~~TG~a~NPAR~~GPa 199 (301)
T 2zz9_A 133 TAGHGLLVELIITFQLVFTIFASCDDKR---------TD--VTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPA 199 (301)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHSCSSS---------SC--CSS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred chHHHHHHHHHHHHHHHHHHHHhcCCCC---------CC--ccc--hHhHHHHHHHHHHHHHhcCCcccccCcHHHHHHH
Confidence 5678999999999999998876431110 00 011 2567888888777777778999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+... .|...|+||++|
T Consensus 200 l~~~-~w~~~WVy~vgP 215 (301)
T 2zz9_A 200 VIMG-NWENHWIYWVGP 215 (301)
T ss_dssp HHHC-CCTTTTHHHHHH
T ss_pred HHhC-CCcceeeeeeHH
Confidence 9865 799999999999
No 22
>3iyz_A Aquaporin-4; water transport, water channel, two-dimensional C membrane protein, baculovirus expression system, glycoprote membrane; 10.00A {Rattus norvegicus}
Probab=98.94 E-value=2.2e-09 Score=97.46 Aligned_cols=83 Identities=17% Similarity=0.225 Sum_probs=64.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+..++++.|+++||+|++..++...... .. ..+ ..++++|+.+++++...+++||+.+|||++|+..
T Consensus 172 s~~~~f~~E~i~Tf~Lv~~Ila~~d~~~---------~~--~~~--~~pl~IGl~v~i~~~~g~~~TG~amNPARdlGPa 238 (340)
T 3iyz_A 172 TAGHGLLVELIITFQLVFTIFASCDDKR---------TD--VTG--SVALAIGFSVAIGHLFAINYTGASMNPARSFGPA 238 (340)
T ss_pred CHHHHHHHHHHHHHHHHHHHHHhhcCcc---------CC--ccc--chhhHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 5678999999999999998776532110 00 011 1467788888777777778999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+... .|...|+||+++
T Consensus 239 l~~~-~w~~~WVywvgP 254 (340)
T 3iyz_A 239 VIMG-NWENHWIYWVGP 254 (340)
T ss_pred HHcc-CCCcEeehhHHH
Confidence 9865 688999999999
No 23
>3gd8_A Aquaporin-4; proton exclusion, structural genomics protein structure initiative, center for structures of MEMB proteins, CSMP, glycoprotein; HET: BOG; 1.80A {Homo sapiens}
Probab=98.92 E-value=3.2e-09 Score=90.70 Aligned_cols=83 Identities=19% Similarity=0.260 Sum_probs=63.4
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+..+.++.|+++|++|++..++.... + . ... .+ ..++++|+.+.+.....++.||+.+|||++|++.
T Consensus 124 s~~~~~~~E~i~Tf~Lv~~i~~~~~~-~-~-------~~~--~~--~~pl~iGl~v~~~~~~g~~~TG~a~NPAR~~GP~ 190 (223)
T 3gd8_A 124 TAGHGLLVELIITFQLVFTIFASCDS-K-R-------TDV--TG--SIALAIGFSVAIGHLFAINYTGASMNPARSFGPA 190 (223)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHTCT-T-C-------SCC--CS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHhcc-c-c-------CCc--cC--CccHHHHHHHHHHHHhccCCccccccHHHHHHHH
Confidence 45789999999999999987764311 1 0 000 11 1467788877766666668999999999999999
Q ss_pred HhccCcchhhHHHHHHH
Q 028312 166 LARKVSLVRAVMWGQRA 182 (210)
Q Consensus 166 l~gkis~~r~~~YiiAQ 182 (210)
+... .|...|+||+++
T Consensus 191 l~~~-~w~~~Wvy~vgP 206 (223)
T 3gd8_A 191 VIMG-NWENHWIYWVGP 206 (223)
T ss_dssp HHHT-CCTTTTHHHHHH
T ss_pred HHhc-CCCcEEeehhHH
Confidence 9865 799999999999
No 24
>1ldf_A Glycerol uptake facilitator protein; glycerol-conducting membrane channel protein, transport PROT; HET: BOG; 2.10A {Escherichia coli} SCOP: f.19.1.1 PDB: 1fx8_A* 1lda_A* 1ldi_A*
Probab=98.91 E-value=3.8e-09 Score=92.97 Aligned_cols=85 Identities=16% Similarity=0.126 Sum_probs=65.7
Q ss_pred HHHHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHH
Q 028312 86 SFYRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLF 165 (210)
Q Consensus 86 sl~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~ 165 (210)
+.+++++.|+++|++|++..++.... ... .. ..-..++++|+.++++.++.++.||+.+|||++|++.
T Consensus 144 s~~~~~~~E~i~Tf~Lv~~il~~~d~--~~~---------~~-~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPa 211 (281)
T 1ldf_A 144 NFVQAFAVEMVITAILMGLILALTDD--GNG---------VP-RGPLAPLLIGLLIAVIGASMGPLTGTAMNPARDFGPK 211 (281)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHCT--TSS---------SC-CGGGHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHHHHHHHHhcc--CCC---------Cc-ccchHHHHHHHHHHHHHHhcccccccccCcHhhHHHH
Confidence 57899999999999999988765321 100 00 0113688999999999999999999999999999998
Q ss_pred Hhcc------Ccch------hhHHHHHHH
Q 028312 166 LARK------VSLV------RAVMWGQRA 182 (210)
Q Consensus 166 l~gk------is~~------r~~~YiiAQ 182 (210)
+... -.|. ..|+||++|
T Consensus 212 l~~~~~g~g~~~~~~~~~~~~~WVy~vgP 240 (281)
T 1ldf_A 212 VFAWLAGWGNVAFTGGRDIPYFLVPLFGP 240 (281)
T ss_dssp HHHHHTTTTTHHHHTTCSSCTTHHHHHHH
T ss_pred HHHHhcccccccccccCCCceeeHHhHHH
Confidence 8642 2333 689999999
No 25
>3c02_A Aquaglyceroporin; membrane protein, glycerol, water, transport, structural GEN PSI-2, protein structure initiative; HET: BOG; 2.05A {Plasmodium falciparum}
Probab=98.89 E-value=3e-09 Score=92.63 Aligned_cols=84 Identities=19% Similarity=0.170 Sum_probs=64.5
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh
Q 028312 88 YRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLA 167 (210)
Q Consensus 88 ~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~l~ 167 (210)
.++++.|+++|++|++..++.....+.. ....+.+++++|+.++++.++.++.||+.+|||++|++.+.
T Consensus 135 ~~~~~~E~i~Tf~Lv~~i~~~~d~~~~~-----------~~~~~~~pl~IGl~v~~~~~~~g~~TG~a~NPAR~~GPal~ 203 (258)
T 3c02_A 135 TGAFFNELILTGILLLVILVVVDENICG-----------KFHILKLSSVVGLIILCIGITFGGNTGFALNPSRDLGSRFL 203 (258)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHCHHHHC-----------SCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHhCcccCC-----------cccccHHHHHHHHHHHHHHHhccCccCCCcChHHHHHHHHH
Confidence 4599999999999999887653211100 01123238999999999999999999999999999999997
Q ss_pred ccC-----cc----hhhHHHHHHH
Q 028312 168 RKV-----SL----VRAVMWGQRA 182 (210)
Q Consensus 168 gki-----s~----~r~~~YiiAQ 182 (210)
..+ .| ...|+||++|
T Consensus 204 ~~~~~g~~~~~~~~~y~Wv~~vgP 227 (258)
T 3c02_A 204 SLIAYGKDTFTKDNFYFWVPLVAP 227 (258)
T ss_dssp HHHHHCTHHHHHHHHTTHHHHHHH
T ss_pred HhccccccccccCCceeehHHHHH
Confidence 532 45 3489999999
No 26
>1j4n_A Aquaporin 1; membrane protein, channel protein, transmembrane helices; HET: BNG; 2.20A {Bos taurus} SCOP: f.19.1.1 PDB: 1h6i_A 1fqy_A 1ih5_A
Probab=98.89 E-value=3.8e-09 Score=92.70 Aligned_cols=81 Identities=20% Similarity=0.146 Sum_probs=62.3
Q ss_pred HHHHHHHHHHHHHHHHHHhhhhhcccccCCCCCCCCCCCCcchhHHHHHHHHHHHHHHHHhcCCCCcccChHHHHHHHHh
Q 028312 88 YRALIAEFIATLLFLYVTVLTVIGYKSQTDPAKNVDGCAGVGILGIAWAFGGMIFVLVYCTAGISGGHINPAVTFGLFLA 167 (210)
Q Consensus 88 ~Ra~lAEFigTfLfvfi~~gtvi~~~~~~~~~~~~~~~~~~g~l~iAlafGl~I~vlIy~~g~ISGgHlNPAVTfal~l~ 167 (210)
.+.++.|+++|++|++..++.... .. . ...+ ..++++|+.+++++...++.||+.+|||++|+..+.
T Consensus 138 ~~~~~~E~i~T~~Lv~~i~~~~d~--~~-------~--~~~~--~~pl~IGl~v~~~~~~~~~~TG~a~NPAR~~Gpal~ 204 (271)
T 1j4n_A 138 GQGLGIEIIGTLQLVLCVLATTDR--RR-------R--DLGG--SGPLAIGFSVALGHLLAIDYTGCGINPARSFGSSVI 204 (271)
T ss_dssp TGGGHHHHHHHHHHHHHHHHHTCS--SC-------C--CCCS--CHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHhhccc--cC-------C--Cccc--cHHHHHHHHHHHHHHhccCCCccccChHHHHHHHHH
Confidence 567889999999999987754211 00 0 0011 257788888887777767899999999999999988
Q ss_pred ccCcchhhHHHHHHH
Q 028312 168 RKVSLVRAVMWGQRA 182 (210)
Q Consensus 168 gkis~~r~~~YiiAQ 182 (210)
.. .|...|+||++|
T Consensus 205 ~~-~~~~~wv~~vgP 218 (271)
T 1j4n_A 205 TH-NFQDHWIFWVGP 218 (271)
T ss_dssp TT-CCTTTTHHHHHH
T ss_pred hC-CCcceeHHHHHH
Confidence 65 788999999999
No 27
>3s2u_A UDP-N-acetylglucosamine--N-acetylmuramyl-(pentape pyrophosphoryl-undecaprenol N-acetylglucosamine...; N-acetylglucosaminyl transferase; HET: UD1; 2.23A {Pseudomonas aeruginosa}
Probab=70.26 E-value=0.46 Score=41.50 Aligned_cols=21 Identities=33% Similarity=0.506 Sum_probs=17.1
Q ss_pred hcCCCCcccChHHHHHHHHhc
Q 028312 148 TAGISGGHINPAVTFGLFLAR 168 (210)
Q Consensus 148 ~g~ISGgHlNPAVTfal~l~g 168 (210)
++|=||||++||++++-.+..
T Consensus 8 ~~GGTgGHi~palala~~L~~ 28 (365)
T 3s2u_A 8 MAGGTGGHVFPALACAREFQA 28 (365)
T ss_dssp ECCSSHHHHHHHHHHHHHHHH
T ss_pred EcCCCHHHHHHHHHHHHHHHh
Confidence 344589999999999988854
No 28
>4g9j_C Synthetic peptide, serine/threonine-protein phosphatase PP1-alpha Ca subunit; activating peptide; 3.10A {Homo sapiens}
Probab=33.50 E-value=5 Score=22.80 Aligned_cols=6 Identities=83% Similarity=1.071 Sum_probs=2.4
Q ss_pred HhHHHH
Q 028312 16 KRKRKR 21 (210)
Q Consensus 16 ~~~~~~ 21 (210)
|||||.
T Consensus 6 krkrkn 11 (26)
T 4g9j_C 6 KRKRKN 11 (26)
T ss_pred cccccc
Confidence 334443
No 29
>3ixz_A Potassium-transporting ATPase alpha; ION pump, H+, K+-ATPase, P-type ATPase, membrane protein, hydrolase, aluminium fluoride, ATP-binding; 6.50A {Sus scrofa} PDB: 2yn9_A 2xzb_A 1iwc_A 1iwf_A
Probab=23.88 E-value=54 Score=32.95 Aligned_cols=12 Identities=8% Similarity=0.166 Sum_probs=5.6
Q ss_pred HHHHHHHHHHHH
Q 028312 86 SFYRALIAEFIA 97 (210)
Q Consensus 86 sl~Ra~lAEFig 97 (210)
++|+.++.+|..
T Consensus 97 ~~~~~~~~q~~~ 108 (1034)
T 3ixz_A 97 PEYVKFARQLAG 108 (1034)
T ss_pred CHHHHHHHHHhC
Confidence 334445555444
Done!